Multiple sequence alignment - TraesCS3D01G007000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G007000 chr3D 100.000 2768 0 0 1 2768 2454482 2451715 0.000000e+00 5112.0
1 TraesCS3D01G007000 chr3D 76.296 135 22 5 2386 2520 141402852 141402728 2.300000e-06 63.9
2 TraesCS3D01G007000 chr3A 88.170 1699 129 41 792 2438 1617918 1619596 0.000000e+00 1958.0
3 TraesCS3D01G007000 chr3A 89.286 476 43 2 985 1460 1648548 1649015 8.540000e-165 590.0
4 TraesCS3D01G007000 chr3A 97.436 195 5 0 2570 2764 1619730 1619924 1.590000e-87 333.0
5 TraesCS3D01G007000 chr3A 75.723 173 30 10 109 277 1771824 1771988 2.960000e-10 76.8
6 TraesCS3D01G007000 chrUn 90.843 1103 69 13 985 2073 270457307 270456223 0.000000e+00 1448.0
7 TraesCS3D01G007000 chrUn 90.843 1103 69 13 985 2073 270465571 270464487 0.000000e+00 1448.0
8 TraesCS3D01G007000 chrUn 90.843 1103 69 13 985 2073 280686166 280685082 0.000000e+00 1448.0
9 TraesCS3D01G007000 chrUn 90.476 462 30 8 2113 2573 270456221 270455773 5.100000e-167 597.0
10 TraesCS3D01G007000 chrUn 90.476 462 30 8 2113 2573 270464485 270464037 5.100000e-167 597.0
11 TraesCS3D01G007000 chrUn 90.476 462 30 8 2113 2573 280685080 280684632 5.100000e-167 597.0
12 TraesCS3D01G007000 chrUn 93.970 199 12 0 2570 2768 270455742 270455544 4.480000e-78 302.0
13 TraesCS3D01G007000 chrUn 93.970 199 12 0 2570 2768 270464006 270463808 4.480000e-78 302.0
14 TraesCS3D01G007000 chrUn 93.970 199 12 0 2570 2768 280684601 280684403 4.480000e-78 302.0
15 TraesCS3D01G007000 chr1B 83.056 301 43 7 258 554 491767974 491767678 1.630000e-67 267.0
16 TraesCS3D01G007000 chr7B 78.734 395 58 18 255 630 742475904 742476291 9.910000e-60 241.0
17 TraesCS3D01G007000 chr7B 82.979 235 27 9 333 559 653167166 653167395 1.680000e-47 200.0
18 TraesCS3D01G007000 chr7B 82.979 235 27 9 333 559 653278083 653278312 1.680000e-47 200.0
19 TraesCS3D01G007000 chr7B 75.802 405 75 21 234 628 750383149 750383540 1.690000e-42 183.0
20 TraesCS3D01G007000 chr4D 78.412 403 62 15 245 628 488418905 488418509 3.560000e-59 239.0
21 TraesCS3D01G007000 chr3B 87.324 213 13 3 2570 2768 3262617 3262405 5.960000e-57 231.0
22 TraesCS3D01G007000 chr3B 78.125 192 22 5 141 331 342492706 342492878 1.360000e-18 104.0
23 TraesCS3D01G007000 chr3B 85.567 97 10 4 165 259 82307474 82307568 6.310000e-17 99.0
24 TraesCS3D01G007000 chr6B 79.866 298 50 8 255 548 659583566 659583275 2.790000e-50 209.0
25 TraesCS3D01G007000 chr6B 81.712 257 37 8 256 508 256484105 256484355 3.610000e-49 206.0
26 TraesCS3D01G007000 chr2A 80.769 286 40 11 268 548 674018492 674018767 2.790000e-50 209.0
27 TraesCS3D01G007000 chr4B 80.282 213 33 7 351 559 69321434 69321227 4.770000e-33 152.0
28 TraesCS3D01G007000 chr7A 80.000 150 19 8 2 145 468954406 468954550 1.750000e-17 100.0
29 TraesCS3D01G007000 chr2B 85.227 88 12 1 245 332 393110824 393110738 3.800000e-14 89.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G007000 chr3D 2451715 2454482 2767 True 5112.000000 5112 100.000 1 2768 1 chr3D.!!$R1 2767
1 TraesCS3D01G007000 chr3A 1617918 1619924 2006 False 1145.500000 1958 92.803 792 2764 2 chr3A.!!$F3 1972
2 TraesCS3D01G007000 chrUn 270455544 270457307 1763 True 782.333333 1448 91.763 985 2768 3 chrUn.!!$R1 1783
3 TraesCS3D01G007000 chrUn 270463808 270465571 1763 True 782.333333 1448 91.763 985 2768 3 chrUn.!!$R2 1783
4 TraesCS3D01G007000 chrUn 280684403 280686166 1763 True 782.333333 1448 91.763 985 2768 3 chrUn.!!$R3 1783

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
261 262 0.032130 ACTTTGCTTCGCGTGAGAGA 59.968 50.0 5.77 0.0 38.45 3.10 F
706 707 0.038159 GCGTATGCTAGGCGAGGAAT 60.038 55.0 0.00 0.0 38.39 3.01 F
715 716 0.106619 AGGCGAGGAATAGGACGACT 60.107 55.0 0.00 0.0 39.34 4.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1183 1217 0.174845 TGTTGGTCGGTCGATCCATC 59.825 55.000 12.68 12.32 35.57 3.51 R
1553 1602 1.526917 CCGACCCTGCCATGAATCC 60.527 63.158 0.00 0.00 0.00 3.01 R
2489 2561 2.027745 CAGTGGCAGTCATAGAACCTGT 60.028 50.000 0.00 0.00 0.00 4.00 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.307934 TTTTTGCTTCCACAACAGGC 57.692 45.000 0.00 0.00 0.00 4.85
20 21 1.189752 TTTTGCTTCCACAACAGGCA 58.810 45.000 0.00 0.00 0.00 4.75
21 22 0.459489 TTTGCTTCCACAACAGGCAC 59.541 50.000 0.00 0.00 32.47 5.01
22 23 0.682532 TTGCTTCCACAACAGGCACA 60.683 50.000 0.00 0.00 32.47 4.57
23 24 1.102809 TGCTTCCACAACAGGCACAG 61.103 55.000 0.00 0.00 0.00 3.66
24 25 1.656441 CTTCCACAACAGGCACAGC 59.344 57.895 0.00 0.00 0.00 4.40
36 37 2.031012 CACAGCCGTGCCTCTCAA 59.969 61.111 0.00 0.00 36.06 3.02
37 38 1.597854 CACAGCCGTGCCTCTCAAA 60.598 57.895 0.00 0.00 36.06 2.69
38 39 1.148273 ACAGCCGTGCCTCTCAAAA 59.852 52.632 0.00 0.00 0.00 2.44
39 40 0.465460 ACAGCCGTGCCTCTCAAAAA 60.465 50.000 0.00 0.00 0.00 1.94
40 41 0.883833 CAGCCGTGCCTCTCAAAAAT 59.116 50.000 0.00 0.00 0.00 1.82
41 42 0.883833 AGCCGTGCCTCTCAAAAATG 59.116 50.000 0.00 0.00 0.00 2.32
42 43 0.881118 GCCGTGCCTCTCAAAAATGA 59.119 50.000 0.00 0.00 0.00 2.57
43 44 1.269448 GCCGTGCCTCTCAAAAATGAA 59.731 47.619 0.00 0.00 0.00 2.57
44 45 2.288152 GCCGTGCCTCTCAAAAATGAAA 60.288 45.455 0.00 0.00 0.00 2.69
45 46 3.798548 GCCGTGCCTCTCAAAAATGAAAA 60.799 43.478 0.00 0.00 0.00 2.29
46 47 4.367450 CCGTGCCTCTCAAAAATGAAAAA 58.633 39.130 0.00 0.00 0.00 1.94
79 80 2.110213 TCGCAAGAGGCACGGTTT 59.890 55.556 0.00 0.00 45.01 3.27
80 81 1.525077 TCGCAAGAGGCACGGTTTT 60.525 52.632 0.00 0.00 45.01 2.43
81 82 1.370414 CGCAAGAGGCACGGTTTTG 60.370 57.895 0.00 0.00 45.17 2.44
82 83 1.661509 GCAAGAGGCACGGTTTTGC 60.662 57.895 0.00 0.00 43.97 3.68
88 89 2.556287 GCACGGTTTTGCCTCTCG 59.444 61.111 0.00 0.00 36.42 4.04
89 90 1.959226 GCACGGTTTTGCCTCTCGA 60.959 57.895 0.00 0.00 36.42 4.04
90 91 1.503818 GCACGGTTTTGCCTCTCGAA 61.504 55.000 0.00 0.00 36.42 3.71
91 92 0.941542 CACGGTTTTGCCTCTCGAAA 59.058 50.000 0.00 0.00 34.25 3.46
92 93 1.332375 CACGGTTTTGCCTCTCGAAAA 59.668 47.619 0.00 0.00 34.25 2.29
93 94 1.332686 ACGGTTTTGCCTCTCGAAAAC 59.667 47.619 0.00 0.00 40.04 2.43
94 95 2.032414 GGTTTTGCCTCTCGAAAACG 57.968 50.000 0.00 0.00 41.15 3.60
95 96 1.600485 GGTTTTGCCTCTCGAAAACGA 59.400 47.619 0.00 0.00 41.15 3.85
96 97 2.032426 GGTTTTGCCTCTCGAAAACGAA 59.968 45.455 0.00 0.00 41.15 3.85
97 98 3.487879 GGTTTTGCCTCTCGAAAACGAAA 60.488 43.478 0.00 0.00 41.15 3.46
98 99 4.099824 GTTTTGCCTCTCGAAAACGAAAA 58.900 39.130 0.00 0.00 33.63 2.29
99 100 4.358494 TTTGCCTCTCGAAAACGAAAAA 57.642 36.364 0.00 0.00 0.00 1.94
138 139 2.612200 TTTTTCCGTCAGAGGCACG 58.388 52.632 0.00 0.00 36.99 5.34
143 144 4.043168 CGTCAGAGGCACGGTTTT 57.957 55.556 0.00 0.00 33.46 2.43
144 145 2.317230 CGTCAGAGGCACGGTTTTT 58.683 52.632 0.00 0.00 33.46 1.94
145 146 0.234884 CGTCAGAGGCACGGTTTTTC 59.765 55.000 0.00 0.00 33.46 2.29
146 147 1.594331 GTCAGAGGCACGGTTTTTCT 58.406 50.000 0.00 0.00 0.00 2.52
147 148 1.947456 GTCAGAGGCACGGTTTTTCTT 59.053 47.619 0.00 0.00 0.00 2.52
148 149 2.357952 GTCAGAGGCACGGTTTTTCTTT 59.642 45.455 0.00 0.00 0.00 2.52
149 150 2.616842 TCAGAGGCACGGTTTTTCTTTC 59.383 45.455 0.00 0.00 0.00 2.62
150 151 2.357637 CAGAGGCACGGTTTTTCTTTCA 59.642 45.455 0.00 0.00 0.00 2.69
151 152 2.357952 AGAGGCACGGTTTTTCTTTCAC 59.642 45.455 0.00 0.00 0.00 3.18
152 153 1.064952 AGGCACGGTTTTTCTTTCACG 59.935 47.619 0.00 0.00 0.00 4.35
153 154 1.064357 GGCACGGTTTTTCTTTCACGA 59.936 47.619 0.00 0.00 0.00 4.35
154 155 2.478200 GGCACGGTTTTTCTTTCACGAA 60.478 45.455 0.00 0.00 0.00 3.85
155 156 3.172824 GCACGGTTTTTCTTTCACGAAA 58.827 40.909 0.00 0.00 0.00 3.46
156 157 3.239712 GCACGGTTTTTCTTTCACGAAAG 59.760 43.478 12.40 12.40 46.82 2.62
157 158 3.789224 CACGGTTTTTCTTTCACGAAAGG 59.211 43.478 17.23 4.48 45.80 3.11
158 159 2.787129 CGGTTTTTCTTTCACGAAAGGC 59.213 45.455 17.23 5.50 45.80 4.35
159 160 3.732471 CGGTTTTTCTTTCACGAAAGGCA 60.732 43.478 17.23 4.46 45.80 4.75
160 161 4.368315 GGTTTTTCTTTCACGAAAGGCAT 58.632 39.130 17.23 0.00 45.80 4.40
161 162 4.209080 GGTTTTTCTTTCACGAAAGGCATG 59.791 41.667 17.23 0.00 45.80 4.06
162 163 3.641437 TTTCTTTCACGAAAGGCATGG 57.359 42.857 17.23 0.00 45.80 3.66
163 164 2.559698 TCTTTCACGAAAGGCATGGA 57.440 45.000 17.23 0.00 45.80 3.41
164 165 3.071874 TCTTTCACGAAAGGCATGGAT 57.928 42.857 17.23 0.00 45.80 3.41
165 166 3.420893 TCTTTCACGAAAGGCATGGATT 58.579 40.909 17.23 0.00 45.80 3.01
166 167 3.826157 TCTTTCACGAAAGGCATGGATTT 59.174 39.130 17.23 0.00 45.80 2.17
167 168 3.574284 TTCACGAAAGGCATGGATTTG 57.426 42.857 0.00 0.00 0.00 2.32
168 169 1.202114 TCACGAAAGGCATGGATTTGC 59.798 47.619 0.00 0.00 42.01 3.68
169 170 1.203052 CACGAAAGGCATGGATTTGCT 59.797 47.619 0.00 0.00 42.38 3.91
170 171 1.895131 ACGAAAGGCATGGATTTGCTT 59.105 42.857 0.00 0.00 42.38 3.91
171 172 2.094545 ACGAAAGGCATGGATTTGCTTC 60.095 45.455 0.00 0.00 42.38 3.86
172 173 2.736400 CGAAAGGCATGGATTTGCTTCC 60.736 50.000 0.00 0.00 42.38 3.46
173 174 0.819582 AAGGCATGGATTTGCTTCCG 59.180 50.000 0.00 0.00 42.38 4.30
174 175 1.227060 GGCATGGATTTGCTTCCGC 60.227 57.895 0.00 0.00 42.38 5.54
175 176 1.669999 GGCATGGATTTGCTTCCGCT 61.670 55.000 0.00 0.00 42.38 5.52
176 177 1.024271 GCATGGATTTGCTTCCGCTA 58.976 50.000 0.00 0.00 39.57 4.26
177 178 1.002033 GCATGGATTTGCTTCCGCTAG 60.002 52.381 0.00 0.00 39.57 3.42
178 179 2.564771 CATGGATTTGCTTCCGCTAGA 58.435 47.619 0.00 0.00 38.74 2.43
179 180 2.315925 TGGATTTGCTTCCGCTAGAG 57.684 50.000 0.00 0.00 38.74 2.43
180 181 1.134401 TGGATTTGCTTCCGCTAGAGG 60.134 52.381 6.10 6.10 38.74 3.69
184 185 2.896443 GCTTCCGCTAGAGGCACT 59.104 61.111 7.80 0.00 46.54 4.40
185 186 1.520342 GCTTCCGCTAGAGGCACTG 60.520 63.158 7.80 0.00 46.54 3.66
186 187 1.520342 CTTCCGCTAGAGGCACTGC 60.520 63.158 7.80 0.00 41.55 4.40
198 199 4.056125 CACTGCCGTGCCTCTCGA 62.056 66.667 0.00 0.00 33.82 4.04
199 200 3.303135 ACTGCCGTGCCTCTCGAA 61.303 61.111 0.00 0.00 0.00 3.71
200 201 2.048222 CTGCCGTGCCTCTCGAAA 60.048 61.111 0.00 0.00 0.00 3.46
201 202 1.667830 CTGCCGTGCCTCTCGAAAA 60.668 57.895 0.00 0.00 0.00 2.29
202 203 1.901650 CTGCCGTGCCTCTCGAAAAC 61.902 60.000 0.00 0.00 0.00 2.43
203 204 3.011760 GCCGTGCCTCTCGAAAACG 62.012 63.158 0.00 0.00 0.00 3.60
204 205 1.372499 CCGTGCCTCTCGAAAACGA 60.372 57.895 0.00 0.00 36.38 3.85
205 206 0.942410 CCGTGCCTCTCGAAAACGAA 60.942 55.000 0.00 0.00 36.38 3.85
206 207 0.856641 CGTGCCTCTCGAAAACGAAA 59.143 50.000 0.00 0.00 36.38 3.46
207 208 1.259507 CGTGCCTCTCGAAAACGAAAA 59.740 47.619 0.00 0.00 36.38 2.29
208 209 2.285950 CGTGCCTCTCGAAAACGAAAAA 60.286 45.455 0.00 0.00 36.38 1.94
238 239 1.892209 TTTTTCCTTCCACGAGAGGC 58.108 50.000 0.00 0.00 0.00 4.70
239 240 0.762418 TTTTCCTTCCACGAGAGGCA 59.238 50.000 0.00 0.00 0.00 4.75
240 241 0.984230 TTTCCTTCCACGAGAGGCAT 59.016 50.000 0.00 0.00 0.00 4.40
241 242 0.250234 TTCCTTCCACGAGAGGCATG 59.750 55.000 0.00 0.00 0.00 4.06
242 243 0.614697 TCCTTCCACGAGAGGCATGA 60.615 55.000 0.00 0.00 0.00 3.07
243 244 0.460987 CCTTCCACGAGAGGCATGAC 60.461 60.000 0.00 0.00 0.00 3.06
244 245 0.534412 CTTCCACGAGAGGCATGACT 59.466 55.000 0.00 0.00 0.00 3.41
245 246 0.976641 TTCCACGAGAGGCATGACTT 59.023 50.000 0.41 0.00 0.00 3.01
246 247 0.976641 TCCACGAGAGGCATGACTTT 59.023 50.000 0.41 0.00 0.00 2.66
247 248 1.081892 CCACGAGAGGCATGACTTTG 58.918 55.000 0.41 0.00 0.00 2.77
248 249 0.445436 CACGAGAGGCATGACTTTGC 59.555 55.000 0.41 0.00 42.01 3.68
249 250 0.322975 ACGAGAGGCATGACTTTGCT 59.677 50.000 0.41 0.00 42.38 3.91
250 251 1.271054 ACGAGAGGCATGACTTTGCTT 60.271 47.619 0.41 0.00 42.38 3.91
251 252 1.396301 CGAGAGGCATGACTTTGCTTC 59.604 52.381 0.41 0.80 46.00 3.86
252 253 3.984292 GAGGCATGACTTTGCTTCG 57.016 52.632 0.41 0.00 38.68 3.79
253 254 0.179179 GAGGCATGACTTTGCTTCGC 60.179 55.000 0.41 0.00 38.68 4.70
254 255 1.512734 GGCATGACTTTGCTTCGCG 60.513 57.895 0.00 0.00 42.38 5.87
255 256 1.207593 GCATGACTTTGCTTCGCGT 59.792 52.632 5.77 0.00 39.57 6.01
256 257 1.061799 GCATGACTTTGCTTCGCGTG 61.062 55.000 5.77 1.17 39.57 5.34
257 258 0.512518 CATGACTTTGCTTCGCGTGA 59.487 50.000 5.77 0.00 0.00 4.35
258 259 0.792640 ATGACTTTGCTTCGCGTGAG 59.207 50.000 5.77 6.96 0.00 3.51
259 260 0.249280 TGACTTTGCTTCGCGTGAGA 60.249 50.000 5.77 0.00 0.00 3.27
260 261 0.436531 GACTTTGCTTCGCGTGAGAG 59.563 55.000 5.77 1.46 0.00 3.20
261 262 0.032130 ACTTTGCTTCGCGTGAGAGA 59.968 50.000 5.77 0.00 38.45 3.10
262 263 0.436531 CTTTGCTTCGCGTGAGAGAC 59.563 55.000 5.77 0.00 40.45 3.36
263 264 0.249280 TTTGCTTCGCGTGAGAGACA 60.249 50.000 5.77 0.00 40.45 3.41
264 265 0.939577 TTGCTTCGCGTGAGAGACAC 60.940 55.000 5.77 0.00 40.45 3.67
273 274 1.583054 GTGAGAGACACGGTTTTGCT 58.417 50.000 0.00 0.00 39.78 3.91
274 275 1.940613 GTGAGAGACACGGTTTTGCTT 59.059 47.619 0.00 0.00 39.78 3.91
275 276 2.032808 GTGAGAGACACGGTTTTGCTTC 60.033 50.000 0.00 0.00 39.78 3.86
276 277 1.531578 GAGAGACACGGTTTTGCTTCC 59.468 52.381 0.00 0.00 0.00 3.46
277 278 1.134220 AGAGACACGGTTTTGCTTCCA 60.134 47.619 0.00 0.00 0.00 3.53
278 279 1.880027 GAGACACGGTTTTGCTTCCAT 59.120 47.619 0.00 0.00 0.00 3.41
279 280 1.608590 AGACACGGTTTTGCTTCCATG 59.391 47.619 0.00 0.00 0.00 3.66
280 281 1.606668 GACACGGTTTTGCTTCCATGA 59.393 47.619 0.00 0.00 0.00 3.07
281 282 1.608590 ACACGGTTTTGCTTCCATGAG 59.391 47.619 0.00 0.00 0.00 2.90
282 283 1.068333 CACGGTTTTGCTTCCATGAGG 60.068 52.381 0.00 0.00 0.00 3.86
283 284 0.527565 CGGTTTTGCTTCCATGAGGG 59.472 55.000 0.00 0.00 34.83 4.30
284 285 1.886222 CGGTTTTGCTTCCATGAGGGA 60.886 52.381 0.00 0.00 46.61 4.20
295 296 2.435805 TCCATGAGGGACATAGAGTTGC 59.564 50.000 0.00 0.00 42.15 4.17
296 297 2.437281 CCATGAGGGACATAGAGTTGCT 59.563 50.000 0.00 0.00 40.01 3.91
297 298 3.118112 CCATGAGGGACATAGAGTTGCTT 60.118 47.826 0.00 0.00 40.01 3.91
298 299 3.895232 TGAGGGACATAGAGTTGCTTC 57.105 47.619 0.00 0.00 0.00 3.86
299 300 2.501723 TGAGGGACATAGAGTTGCTTCC 59.498 50.000 0.00 0.00 0.00 3.46
300 301 1.482593 AGGGACATAGAGTTGCTTCCG 59.517 52.381 0.00 0.00 0.00 4.30
301 302 1.291132 GGACATAGAGTTGCTTCCGC 58.709 55.000 0.00 0.00 0.00 5.54
302 303 0.924090 GACATAGAGTTGCTTCCGCG 59.076 55.000 0.00 0.00 39.65 6.46
303 304 0.530744 ACATAGAGTTGCTTCCGCGA 59.469 50.000 8.23 0.00 39.65 5.87
304 305 1.203928 CATAGAGTTGCTTCCGCGAG 58.796 55.000 8.23 0.00 39.65 5.03
305 306 1.103803 ATAGAGTTGCTTCCGCGAGA 58.896 50.000 8.23 0.00 39.65 4.04
306 307 0.452184 TAGAGTTGCTTCCGCGAGAG 59.548 55.000 8.23 5.93 39.65 3.20
307 308 1.807573 GAGTTGCTTCCGCGAGAGG 60.808 63.158 8.23 4.88 39.65 3.69
311 312 3.267860 GCTTCCGCGAGAGGCATG 61.268 66.667 20.89 0.00 46.54 4.06
312 313 2.587194 CTTCCGCGAGAGGCATGG 60.587 66.667 8.23 0.00 43.84 3.66
313 314 4.838152 TTCCGCGAGAGGCATGGC 62.838 66.667 12.14 12.14 43.84 4.40
343 344 0.796927 GGAAACGGCTTTCGAGAAGG 59.203 55.000 8.68 0.00 42.43 3.46
344 345 1.607251 GGAAACGGCTTTCGAGAAGGA 60.607 52.381 0.00 0.00 42.43 3.36
345 346 2.140717 GAAACGGCTTTCGAGAAGGAA 58.859 47.619 0.00 0.00 42.43 3.36
346 347 2.249844 AACGGCTTTCGAGAAGGAAA 57.750 45.000 0.00 0.00 42.43 3.13
347 348 2.249844 ACGGCTTTCGAGAAGGAAAA 57.750 45.000 0.00 0.00 42.43 2.29
348 349 2.567985 ACGGCTTTCGAGAAGGAAAAA 58.432 42.857 0.00 0.00 42.43 1.94
364 365 1.419381 AAAAATGCTCCCGGTTTGGT 58.581 45.000 0.00 0.00 35.15 3.67
365 366 1.419381 AAAATGCTCCCGGTTTGGTT 58.581 45.000 0.00 0.00 35.15 3.67
366 367 1.419381 AAATGCTCCCGGTTTGGTTT 58.581 45.000 0.00 0.00 35.15 3.27
367 368 1.419381 AATGCTCCCGGTTTGGTTTT 58.581 45.000 0.00 0.00 35.15 2.43
368 369 1.419381 ATGCTCCCGGTTTGGTTTTT 58.581 45.000 0.00 0.00 35.15 1.94
390 391 8.684973 TTTTTATTCGGTTCTTTTCGTGAAAA 57.315 26.923 7.48 7.48 37.90 2.29
391 392 8.684973 TTTTATTCGGTTCTTTTCGTGAAAAA 57.315 26.923 8.90 0.00 39.49 1.94
430 431 9.965902 AAAAACCTATCAACATGAGATCTAGTT 57.034 29.630 0.00 0.00 0.00 2.24
431 432 9.965902 AAAACCTATCAACATGAGATCTAGTTT 57.034 29.630 0.00 9.88 0.00 2.66
432 433 8.954950 AACCTATCAACATGAGATCTAGTTTG 57.045 34.615 0.00 0.00 0.00 2.93
433 434 8.311395 ACCTATCAACATGAGATCTAGTTTGA 57.689 34.615 0.00 3.20 0.00 2.69
434 435 8.762645 ACCTATCAACATGAGATCTAGTTTGAA 58.237 33.333 0.00 0.00 0.00 2.69
435 436 9.258826 CCTATCAACATGAGATCTAGTTTGAAG 57.741 37.037 0.00 3.98 0.00 3.02
438 439 9.902684 ATCAACATGAGATCTAGTTTGAAGATT 57.097 29.630 0.00 0.00 33.82 2.40
439 440 9.730705 TCAACATGAGATCTAGTTTGAAGATTT 57.269 29.630 0.00 0.00 33.82 2.17
440 441 9.770503 CAACATGAGATCTAGTTTGAAGATTTG 57.229 33.333 0.00 0.00 33.82 2.32
441 442 8.503458 ACATGAGATCTAGTTTGAAGATTTGG 57.497 34.615 0.00 0.00 33.82 3.28
442 443 8.324306 ACATGAGATCTAGTTTGAAGATTTGGA 58.676 33.333 0.00 0.00 33.82 3.53
443 444 8.610896 CATGAGATCTAGTTTGAAGATTTGGAC 58.389 37.037 0.00 0.00 33.82 4.02
444 445 6.813649 TGAGATCTAGTTTGAAGATTTGGACG 59.186 38.462 0.00 0.00 33.82 4.79
445 446 6.702329 AGATCTAGTTTGAAGATTTGGACGT 58.298 36.000 0.00 0.00 33.82 4.34
446 447 6.591834 AGATCTAGTTTGAAGATTTGGACGTG 59.408 38.462 0.00 0.00 33.82 4.49
447 448 5.849510 TCTAGTTTGAAGATTTGGACGTGA 58.150 37.500 0.00 0.00 0.00 4.35
448 449 5.926542 TCTAGTTTGAAGATTTGGACGTGAG 59.073 40.000 0.00 0.00 0.00 3.51
449 450 3.815401 AGTTTGAAGATTTGGACGTGAGG 59.185 43.478 0.00 0.00 0.00 3.86
450 451 3.762407 TTGAAGATTTGGACGTGAGGA 57.238 42.857 0.00 0.00 0.00 3.71
451 452 3.762407 TGAAGATTTGGACGTGAGGAA 57.238 42.857 0.00 0.00 0.00 3.36
452 453 4.286297 TGAAGATTTGGACGTGAGGAAT 57.714 40.909 0.00 0.00 0.00 3.01
453 454 4.253685 TGAAGATTTGGACGTGAGGAATC 58.746 43.478 0.00 0.00 0.00 2.52
454 455 3.268023 AGATTTGGACGTGAGGAATCC 57.732 47.619 0.00 0.00 0.00 3.01
455 456 2.571653 AGATTTGGACGTGAGGAATCCA 59.428 45.455 0.61 0.00 40.83 3.41
458 459 2.401583 TGGACGTGAGGAATCCAATG 57.598 50.000 0.61 0.00 39.60 2.82
459 460 1.905894 TGGACGTGAGGAATCCAATGA 59.094 47.619 0.61 0.00 39.60 2.57
460 461 2.505407 TGGACGTGAGGAATCCAATGAT 59.495 45.455 0.61 0.00 39.60 2.45
461 462 2.874701 GGACGTGAGGAATCCAATGATG 59.125 50.000 0.61 0.00 32.35 3.07
462 463 3.432186 GGACGTGAGGAATCCAATGATGA 60.432 47.826 0.61 0.00 32.35 2.92
463 464 4.191544 GACGTGAGGAATCCAATGATGAA 58.808 43.478 0.61 0.00 0.00 2.57
464 465 4.588899 ACGTGAGGAATCCAATGATGAAA 58.411 39.130 0.61 0.00 0.00 2.69
465 466 5.009631 ACGTGAGGAATCCAATGATGAAAA 58.990 37.500 0.61 0.00 0.00 2.29
466 467 5.653769 ACGTGAGGAATCCAATGATGAAAAT 59.346 36.000 0.61 0.00 0.00 1.82
467 468 5.975344 CGTGAGGAATCCAATGATGAAAATG 59.025 40.000 0.61 0.00 0.00 2.32
468 469 6.278363 GTGAGGAATCCAATGATGAAAATGG 58.722 40.000 0.61 0.00 0.00 3.16
469 470 5.959594 TGAGGAATCCAATGATGAAAATGGT 59.040 36.000 0.61 0.00 34.50 3.55
470 471 6.441284 TGAGGAATCCAATGATGAAAATGGTT 59.559 34.615 0.61 0.00 34.50 3.67
471 472 7.618907 TGAGGAATCCAATGATGAAAATGGTTA 59.381 33.333 0.61 0.00 34.50 2.85
472 473 8.378115 AGGAATCCAATGATGAAAATGGTTAA 57.622 30.769 0.61 0.00 34.50 2.01
473 474 8.824783 AGGAATCCAATGATGAAAATGGTTAAA 58.175 29.630 0.61 0.00 34.50 1.52
474 475 9.101655 GGAATCCAATGATGAAAATGGTTAAAG 57.898 33.333 0.00 0.00 34.50 1.85
475 476 9.874205 GAATCCAATGATGAAAATGGTTAAAGA 57.126 29.630 0.00 0.00 34.50 2.52
482 483 9.657419 ATGATGAAAATGGTTAAAGAATTGGAC 57.343 29.630 0.00 0.00 0.00 4.02
483 484 7.812191 TGATGAAAATGGTTAAAGAATTGGACG 59.188 33.333 0.00 0.00 0.00 4.79
484 485 5.923684 TGAAAATGGTTAAAGAATTGGACGC 59.076 36.000 0.00 0.00 0.00 5.19
485 486 5.461032 AAATGGTTAAAGAATTGGACGCA 57.539 34.783 0.00 0.00 0.00 5.24
486 487 3.907894 TGGTTAAAGAATTGGACGCAC 57.092 42.857 0.00 0.00 0.00 5.34
487 488 2.224549 TGGTTAAAGAATTGGACGCACG 59.775 45.455 0.00 0.00 0.00 5.34
488 489 2.481185 GGTTAAAGAATTGGACGCACGA 59.519 45.455 0.00 0.00 0.00 4.35
489 490 3.126343 GGTTAAAGAATTGGACGCACGAT 59.874 43.478 0.00 0.00 0.00 3.73
490 491 4.379082 GGTTAAAGAATTGGACGCACGATT 60.379 41.667 0.00 0.00 0.00 3.34
491 492 3.915437 AAAGAATTGGACGCACGATTT 57.085 38.095 0.00 0.00 0.00 2.17
492 493 6.308675 GTTAAAGAATTGGACGCACGATTTA 58.691 36.000 0.00 0.00 0.00 1.40
493 494 5.365403 AAAGAATTGGACGCACGATTTAA 57.635 34.783 0.00 0.00 0.00 1.52
494 495 5.365403 AAGAATTGGACGCACGATTTAAA 57.635 34.783 0.00 0.00 0.00 1.52
495 496 5.365403 AGAATTGGACGCACGATTTAAAA 57.635 34.783 0.00 0.00 0.00 1.52
496 497 5.390613 AGAATTGGACGCACGATTTAAAAG 58.609 37.500 0.00 0.00 0.00 2.27
497 498 5.180492 AGAATTGGACGCACGATTTAAAAGA 59.820 36.000 0.00 0.00 0.00 2.52
498 499 5.560966 ATTGGACGCACGATTTAAAAGAT 57.439 34.783 0.00 0.00 0.00 2.40
499 500 6.671614 ATTGGACGCACGATTTAAAAGATA 57.328 33.333 0.00 0.00 0.00 1.98
500 501 6.483385 TTGGACGCACGATTTAAAAGATAA 57.517 33.333 0.00 0.00 0.00 1.75
501 502 6.483385 TGGACGCACGATTTAAAAGATAAA 57.517 33.333 0.00 0.00 0.00 1.40
502 503 6.900189 TGGACGCACGATTTAAAAGATAAAA 58.100 32.000 0.00 0.00 0.00 1.52
503 504 6.797995 TGGACGCACGATTTAAAAGATAAAAC 59.202 34.615 0.00 0.00 0.00 2.43
504 505 6.797995 GGACGCACGATTTAAAAGATAAAACA 59.202 34.615 0.00 0.00 0.00 2.83
505 506 7.007099 GGACGCACGATTTAAAAGATAAAACAG 59.993 37.037 0.00 0.00 0.00 3.16
506 507 7.357303 ACGCACGATTTAAAAGATAAAACAGT 58.643 30.769 0.00 0.00 0.00 3.55
507 508 7.858879 ACGCACGATTTAAAAGATAAAACAGTT 59.141 29.630 0.00 0.00 0.00 3.16
508 509 8.355806 CGCACGATTTAAAAGATAAAACAGTTC 58.644 33.333 0.00 0.00 0.00 3.01
509 510 8.355806 GCACGATTTAAAAGATAAAACAGTTCG 58.644 33.333 0.00 0.00 0.00 3.95
510 511 9.588774 CACGATTTAAAAGATAAAACAGTTCGA 57.411 29.630 6.13 0.00 0.00 3.71
525 526 7.464830 AACAGTTCGAATAAATGGATCTACG 57.535 36.000 0.00 0.00 0.00 3.51
526 527 6.802608 ACAGTTCGAATAAATGGATCTACGA 58.197 36.000 0.00 0.00 0.00 3.43
527 528 6.918569 ACAGTTCGAATAAATGGATCTACGAG 59.081 38.462 0.00 0.00 0.00 4.18
528 529 7.139392 CAGTTCGAATAAATGGATCTACGAGA 58.861 38.462 0.00 0.00 0.00 4.04
529 530 7.648112 CAGTTCGAATAAATGGATCTACGAGAA 59.352 37.037 0.00 0.00 0.00 2.87
530 531 8.195436 AGTTCGAATAAATGGATCTACGAGAAA 58.805 33.333 0.00 0.00 0.00 2.52
531 532 8.814235 GTTCGAATAAATGGATCTACGAGAAAA 58.186 33.333 0.00 0.00 0.00 2.29
532 533 8.575565 TCGAATAAATGGATCTACGAGAAAAG 57.424 34.615 0.00 0.00 0.00 2.27
533 534 7.652105 TCGAATAAATGGATCTACGAGAAAAGG 59.348 37.037 0.00 0.00 0.00 3.11
534 535 7.652105 CGAATAAATGGATCTACGAGAAAAGGA 59.348 37.037 0.00 0.00 0.00 3.36
535 536 9.326413 GAATAAATGGATCTACGAGAAAAGGAA 57.674 33.333 0.00 0.00 0.00 3.36
536 537 9.681062 AATAAATGGATCTACGAGAAAAGGAAA 57.319 29.630 0.00 0.00 0.00 3.13
537 538 6.986904 AATGGATCTACGAGAAAAGGAAAC 57.013 37.500 0.00 0.00 0.00 2.78
550 551 3.125520 GGAAACTTCCAGGTTGCCA 57.874 52.632 3.50 0.00 46.76 4.92
551 552 0.673985 GGAAACTTCCAGGTTGCCAC 59.326 55.000 3.50 0.00 46.76 5.01
552 553 1.398692 GAAACTTCCAGGTTGCCACA 58.601 50.000 0.00 0.00 0.00 4.17
553 554 1.754226 GAAACTTCCAGGTTGCCACAA 59.246 47.619 0.00 0.00 0.00 3.33
554 555 1.859302 AACTTCCAGGTTGCCACAAA 58.141 45.000 0.00 0.00 0.00 2.83
555 556 2.086610 ACTTCCAGGTTGCCACAAAT 57.913 45.000 0.00 0.00 0.00 2.32
556 557 1.688197 ACTTCCAGGTTGCCACAAATG 59.312 47.619 0.00 0.00 0.00 2.32
557 558 1.962807 CTTCCAGGTTGCCACAAATGA 59.037 47.619 0.00 0.00 0.00 2.57
558 559 1.327303 TCCAGGTTGCCACAAATGAC 58.673 50.000 0.00 0.00 0.00 3.06
559 560 1.039068 CCAGGTTGCCACAAATGACA 58.961 50.000 0.00 0.00 0.00 3.58
560 561 1.269726 CCAGGTTGCCACAAATGACAC 60.270 52.381 0.00 0.00 0.00 3.67
561 562 0.667993 AGGTTGCCACAAATGACACG 59.332 50.000 0.00 0.00 0.00 4.49
562 563 0.939106 GGTTGCCACAAATGACACGC 60.939 55.000 0.00 0.00 0.00 5.34
563 564 1.009108 TTGCCACAAATGACACGCG 60.009 52.632 3.53 3.53 0.00 6.01
564 565 1.719725 TTGCCACAAATGACACGCGT 61.720 50.000 5.58 5.58 0.00 6.01
565 566 1.440353 GCCACAAATGACACGCGTC 60.440 57.895 9.86 0.00 42.93 5.19
573 574 4.006532 GACACGCGTCACTTGTCA 57.993 55.556 9.86 0.00 44.74 3.58
574 575 1.558383 GACACGCGTCACTTGTCAC 59.442 57.895 9.86 0.00 44.74 3.67
575 576 1.143373 GACACGCGTCACTTGTCACA 61.143 55.000 9.86 0.00 44.74 3.58
576 577 0.738063 ACACGCGTCACTTGTCACAA 60.738 50.000 9.86 0.00 0.00 3.33
577 578 0.315059 CACGCGTCACTTGTCACAAC 60.315 55.000 9.86 0.00 0.00 3.32
578 579 1.275657 CGCGTCACTTGTCACAACC 59.724 57.895 0.00 0.00 0.00 3.77
579 580 1.151777 CGCGTCACTTGTCACAACCT 61.152 55.000 0.00 0.00 0.00 3.50
580 581 0.304705 GCGTCACTTGTCACAACCTG 59.695 55.000 0.00 0.00 0.00 4.00
581 582 1.934589 CGTCACTTGTCACAACCTGA 58.065 50.000 0.00 0.00 0.00 3.86
582 583 1.860950 CGTCACTTGTCACAACCTGAG 59.139 52.381 0.00 0.00 0.00 3.35
583 584 2.481276 CGTCACTTGTCACAACCTGAGA 60.481 50.000 0.00 0.00 0.00 3.27
584 585 3.531538 GTCACTTGTCACAACCTGAGAA 58.468 45.455 0.00 0.00 31.50 2.87
590 591 4.174411 TGTCACAACCTGAGAAGATACG 57.826 45.455 0.00 0.00 0.00 3.06
591 592 3.824443 TGTCACAACCTGAGAAGATACGA 59.176 43.478 0.00 0.00 0.00 3.43
592 593 4.462834 TGTCACAACCTGAGAAGATACGAT 59.537 41.667 0.00 0.00 0.00 3.73
593 594 5.047306 TGTCACAACCTGAGAAGATACGATT 60.047 40.000 0.00 0.00 0.00 3.34
594 595 5.289675 GTCACAACCTGAGAAGATACGATTG 59.710 44.000 0.00 0.00 0.00 2.67
595 596 5.185056 TCACAACCTGAGAAGATACGATTGA 59.815 40.000 0.00 0.00 0.00 2.57
596 597 6.045318 CACAACCTGAGAAGATACGATTGAT 58.955 40.000 0.00 0.00 0.00 2.57
597 598 7.068226 TCACAACCTGAGAAGATACGATTGATA 59.932 37.037 0.00 0.00 0.00 2.15
598 599 7.869937 CACAACCTGAGAAGATACGATTGATAT 59.130 37.037 0.00 0.00 0.00 1.63
599 600 8.424918 ACAACCTGAGAAGATACGATTGATATT 58.575 33.333 0.00 0.00 0.00 1.28
600 601 9.265901 CAACCTGAGAAGATACGATTGATATTT 57.734 33.333 0.00 0.00 0.00 1.40
601 602 8.824159 ACCTGAGAAGATACGATTGATATTTG 57.176 34.615 0.00 0.00 0.00 2.32
602 603 8.642432 ACCTGAGAAGATACGATTGATATTTGA 58.358 33.333 0.00 0.00 0.00 2.69
603 604 9.138062 CCTGAGAAGATACGATTGATATTTGAG 57.862 37.037 0.00 0.00 0.00 3.02
604 605 9.905171 CTGAGAAGATACGATTGATATTTGAGA 57.095 33.333 0.00 0.00 0.00 3.27
605 606 9.905171 TGAGAAGATACGATTGATATTTGAGAG 57.095 33.333 0.00 0.00 0.00 3.20
606 607 9.352784 GAGAAGATACGATTGATATTTGAGAGG 57.647 37.037 0.00 0.00 0.00 3.69
607 608 8.865090 AGAAGATACGATTGATATTTGAGAGGT 58.135 33.333 0.00 0.00 0.00 3.85
609 610 9.915629 AAGATACGATTGATATTTGAGAGGTAC 57.084 33.333 0.00 0.00 0.00 3.34
629 630 6.480320 AGGTACTCATCAATTAGTGATTTCGC 59.520 38.462 0.00 0.00 45.13 4.70
630 631 5.741388 ACTCATCAATTAGTGATTTCGCC 57.259 39.130 0.00 0.00 45.13 5.54
631 632 4.576463 ACTCATCAATTAGTGATTTCGCCC 59.424 41.667 0.00 0.00 45.13 6.13
632 633 3.882888 TCATCAATTAGTGATTTCGCCCC 59.117 43.478 0.00 0.00 45.13 5.80
633 634 3.644966 TCAATTAGTGATTTCGCCCCT 57.355 42.857 0.00 0.00 0.00 4.79
634 635 4.764050 TCAATTAGTGATTTCGCCCCTA 57.236 40.909 0.00 0.00 0.00 3.53
635 636 5.105567 TCAATTAGTGATTTCGCCCCTAA 57.894 39.130 0.00 0.00 0.00 2.69
636 637 5.502079 TCAATTAGTGATTTCGCCCCTAAA 58.498 37.500 0.00 0.00 0.00 1.85
637 638 5.355910 TCAATTAGTGATTTCGCCCCTAAAC 59.644 40.000 0.00 0.00 0.00 2.01
638 639 4.563140 TTAGTGATTTCGCCCCTAAACT 57.437 40.909 0.00 0.00 0.00 2.66
639 640 2.711542 AGTGATTTCGCCCCTAAACTG 58.288 47.619 0.00 0.00 0.00 3.16
640 641 2.304761 AGTGATTTCGCCCCTAAACTGA 59.695 45.455 0.00 0.00 0.00 3.41
641 642 3.054361 AGTGATTTCGCCCCTAAACTGAT 60.054 43.478 0.00 0.00 0.00 2.90
642 643 3.312697 GTGATTTCGCCCCTAAACTGATC 59.687 47.826 0.00 0.00 0.00 2.92
643 644 3.054728 TGATTTCGCCCCTAAACTGATCA 60.055 43.478 0.00 0.00 0.00 2.92
644 645 3.426787 TTTCGCCCCTAAACTGATCAA 57.573 42.857 0.00 0.00 0.00 2.57
645 646 2.691409 TCGCCCCTAAACTGATCAAG 57.309 50.000 0.00 0.00 0.00 3.02
646 647 1.017387 CGCCCCTAAACTGATCAAGC 58.983 55.000 0.00 0.00 0.00 4.01
647 648 1.407437 CGCCCCTAAACTGATCAAGCT 60.407 52.381 0.00 0.00 0.00 3.74
648 649 2.293170 GCCCCTAAACTGATCAAGCTC 58.707 52.381 0.00 0.00 0.00 4.09
649 650 2.356125 GCCCCTAAACTGATCAAGCTCA 60.356 50.000 0.00 0.00 0.00 4.26
650 651 3.539604 CCCCTAAACTGATCAAGCTCAG 58.460 50.000 0.00 0.00 46.59 3.35
658 659 4.517641 CTGATCAAGCTCAGTGAAATCG 57.482 45.455 0.00 0.00 38.27 3.34
659 660 4.179298 CTGATCAAGCTCAGTGAAATCGA 58.821 43.478 0.00 0.00 38.27 3.59
660 661 4.763073 TGATCAAGCTCAGTGAAATCGAT 58.237 39.130 0.00 0.00 0.00 3.59
661 662 5.906073 TGATCAAGCTCAGTGAAATCGATA 58.094 37.500 0.00 0.00 0.00 2.92
662 663 5.981915 TGATCAAGCTCAGTGAAATCGATAG 59.018 40.000 0.00 0.00 0.00 2.08
663 664 4.686972 TCAAGCTCAGTGAAATCGATAGG 58.313 43.478 0.00 0.00 0.00 2.57
664 665 3.104843 AGCTCAGTGAAATCGATAGGC 57.895 47.619 0.00 0.00 0.00 3.93
665 666 2.139118 GCTCAGTGAAATCGATAGGCC 58.861 52.381 0.00 0.00 0.00 5.19
666 667 2.760374 CTCAGTGAAATCGATAGGCCC 58.240 52.381 0.00 0.00 0.00 5.80
667 668 1.068588 TCAGTGAAATCGATAGGCCCG 59.931 52.381 0.00 0.00 0.00 6.13
668 669 1.120530 AGTGAAATCGATAGGCCCGT 58.879 50.000 0.00 0.00 0.00 5.28
669 670 1.068741 AGTGAAATCGATAGGCCCGTC 59.931 52.381 0.00 0.00 0.00 4.79
670 671 1.068741 GTGAAATCGATAGGCCCGTCT 59.931 52.381 0.00 0.00 0.00 4.18
671 672 2.295349 GTGAAATCGATAGGCCCGTCTA 59.705 50.000 0.00 0.00 0.00 2.59
672 673 2.295349 TGAAATCGATAGGCCCGTCTAC 59.705 50.000 0.00 0.00 0.00 2.59
673 674 2.289592 AATCGATAGGCCCGTCTACT 57.710 50.000 0.00 0.00 0.00 2.57
674 675 1.535833 ATCGATAGGCCCGTCTACTG 58.464 55.000 0.00 0.00 0.00 2.74
675 676 0.536687 TCGATAGGCCCGTCTACTGG 60.537 60.000 0.00 0.00 0.00 4.00
676 677 0.536687 CGATAGGCCCGTCTACTGGA 60.537 60.000 0.00 0.00 0.00 3.86
677 678 1.700955 GATAGGCCCGTCTACTGGAA 58.299 55.000 0.00 0.00 0.00 3.53
678 679 1.614413 GATAGGCCCGTCTACTGGAAG 59.386 57.143 0.00 0.00 42.29 3.46
679 680 1.041447 TAGGCCCGTCTACTGGAAGC 61.041 60.000 0.00 0.00 37.60 3.86
680 681 2.656069 GGCCCGTCTACTGGAAGCA 61.656 63.158 0.00 0.00 37.60 3.91
681 682 1.295423 GCCCGTCTACTGGAAGCAA 59.705 57.895 0.00 0.00 37.60 3.91
682 683 1.019805 GCCCGTCTACTGGAAGCAAC 61.020 60.000 0.00 0.00 37.60 4.17
683 684 0.391263 CCCGTCTACTGGAAGCAACC 60.391 60.000 0.00 0.00 37.60 3.77
684 685 0.608640 CCGTCTACTGGAAGCAACCT 59.391 55.000 1.22 0.00 37.60 3.50
685 686 1.673033 CCGTCTACTGGAAGCAACCTG 60.673 57.143 4.96 4.96 37.60 4.00
686 687 1.443802 GTCTACTGGAAGCAACCTGC 58.556 55.000 6.12 0.00 45.46 4.85
695 696 3.499737 GCAACCTGCGCGTATGCT 61.500 61.111 13.02 0.00 39.65 3.79
696 697 2.171079 GCAACCTGCGCGTATGCTA 61.171 57.895 13.02 0.00 39.65 3.49
697 698 1.927210 CAACCTGCGCGTATGCTAG 59.073 57.895 8.43 3.40 39.65 3.42
698 699 1.227263 AACCTGCGCGTATGCTAGG 60.227 57.895 19.76 19.76 44.24 3.02
699 700 3.038417 CCTGCGCGTATGCTAGGC 61.038 66.667 8.43 6.31 36.66 3.93
704 705 3.039988 GCGTATGCTAGGCGAGGA 58.960 61.111 0.00 0.00 38.39 3.71
705 706 1.362717 GCGTATGCTAGGCGAGGAA 59.637 57.895 0.00 0.00 38.39 3.36
706 707 0.038159 GCGTATGCTAGGCGAGGAAT 60.038 55.000 0.00 0.00 38.39 3.01
707 708 1.201647 GCGTATGCTAGGCGAGGAATA 59.798 52.381 0.00 0.00 38.39 1.75
708 709 2.732597 GCGTATGCTAGGCGAGGAATAG 60.733 54.545 0.00 0.00 38.39 1.73
709 710 2.159366 CGTATGCTAGGCGAGGAATAGG 60.159 54.545 0.00 0.00 0.00 2.57
710 711 2.310779 ATGCTAGGCGAGGAATAGGA 57.689 50.000 0.00 0.00 0.00 2.94
711 712 1.329256 TGCTAGGCGAGGAATAGGAC 58.671 55.000 0.00 0.00 0.00 3.85
712 713 0.241481 GCTAGGCGAGGAATAGGACG 59.759 60.000 0.00 0.00 0.00 4.79
713 714 1.893544 CTAGGCGAGGAATAGGACGA 58.106 55.000 0.00 0.00 0.00 4.20
714 715 1.536331 CTAGGCGAGGAATAGGACGAC 59.464 57.143 0.00 0.00 0.00 4.34
715 716 0.106619 AGGCGAGGAATAGGACGACT 60.107 55.000 0.00 0.00 39.34 4.18
716 717 0.311477 GGCGAGGAATAGGACGACTC 59.689 60.000 0.00 0.00 0.00 3.36
718 719 1.297664 CGAGGAATAGGACGACTCGT 58.702 55.000 3.08 3.08 44.18 4.18
719 720 2.477825 CGAGGAATAGGACGACTCGTA 58.522 52.381 3.53 0.00 44.18 3.43
720 721 2.220593 CGAGGAATAGGACGACTCGTAC 59.779 54.545 5.59 5.59 44.18 3.67
721 722 2.208431 AGGAATAGGACGACTCGTACG 58.792 52.381 9.53 9.53 46.41 3.67
722 723 1.936547 GGAATAGGACGACTCGTACGT 59.063 52.381 16.05 0.00 46.41 3.57
723 724 3.123804 GGAATAGGACGACTCGTACGTA 58.876 50.000 16.05 6.94 46.41 3.57
724 725 3.060205 GGAATAGGACGACTCGTACGTAC 60.060 52.174 15.90 15.90 46.41 3.67
725 726 1.545759 TAGGACGACTCGTACGTACG 58.454 55.000 35.90 35.90 46.41 3.67
726 727 0.388649 AGGACGACTCGTACGTACGT 60.389 55.000 38.17 25.65 46.41 3.57
727 728 2.581059 AGGACGACTCGTACGTACGTG 61.581 57.143 38.17 36.66 46.41 4.49
733 734 3.066692 CGTACGTACGTGCTTGCC 58.933 61.111 33.95 9.95 44.13 4.52
734 735 1.443194 CGTACGTACGTGCTTGCCT 60.443 57.895 33.95 3.43 44.13 4.75
735 736 1.670971 CGTACGTACGTGCTTGCCTG 61.671 60.000 33.95 11.41 44.13 4.85
736 737 0.665369 GTACGTACGTGCTTGCCTGT 60.665 55.000 30.25 1.85 0.00 4.00
737 738 0.665068 TACGTACGTGCTTGCCTGTG 60.665 55.000 30.25 0.00 0.00 3.66
738 739 2.556287 GTACGTGCTTGCCTGTGC 59.444 61.111 0.00 0.00 38.26 4.57
739 740 1.961277 GTACGTGCTTGCCTGTGCT 60.961 57.895 0.00 0.00 38.71 4.40
740 741 1.667830 TACGTGCTTGCCTGTGCTC 60.668 57.895 0.00 0.00 38.71 4.26
741 742 2.099652 TACGTGCTTGCCTGTGCTCT 62.100 55.000 0.00 0.00 38.71 4.09
742 743 2.256591 CGTGCTTGCCTGTGCTCTT 61.257 57.895 0.00 0.00 38.71 2.85
743 744 1.285023 GTGCTTGCCTGTGCTCTTG 59.715 57.895 0.00 0.00 38.71 3.02
744 745 1.900016 TGCTTGCCTGTGCTCTTGG 60.900 57.895 0.00 0.00 38.71 3.61
745 746 1.900498 GCTTGCCTGTGCTCTTGGT 60.900 57.895 0.00 0.00 38.71 3.67
746 747 1.954528 CTTGCCTGTGCTCTTGGTG 59.045 57.895 0.00 0.00 38.71 4.17
747 748 0.820891 CTTGCCTGTGCTCTTGGTGT 60.821 55.000 0.00 0.00 38.71 4.16
748 749 0.819259 TTGCCTGTGCTCTTGGTGTC 60.819 55.000 0.00 0.00 38.71 3.67
749 750 1.968540 GCCTGTGCTCTTGGTGTCC 60.969 63.158 0.00 0.00 33.53 4.02
750 751 1.669115 CCTGTGCTCTTGGTGTCCG 60.669 63.158 0.00 0.00 0.00 4.79
751 752 1.069765 CTGTGCTCTTGGTGTCCGT 59.930 57.895 0.00 0.00 0.00 4.69
752 753 1.224069 CTGTGCTCTTGGTGTCCGTG 61.224 60.000 0.00 0.00 0.00 4.94
753 754 1.227556 GTGCTCTTGGTGTCCGTGT 60.228 57.895 0.00 0.00 0.00 4.49
754 755 1.069090 TGCTCTTGGTGTCCGTGTC 59.931 57.895 0.00 0.00 0.00 3.67
755 756 1.069090 GCTCTTGGTGTCCGTGTCA 59.931 57.895 0.00 0.00 0.00 3.58
756 757 0.946221 GCTCTTGGTGTCCGTGTCAG 60.946 60.000 0.00 0.00 0.00 3.51
757 758 0.946221 CTCTTGGTGTCCGTGTCAGC 60.946 60.000 0.00 0.00 0.00 4.26
758 759 2.279851 TTGGTGTCCGTGTCAGCG 60.280 61.111 0.00 0.00 36.29 5.18
759 760 2.971428 CTTGGTGTCCGTGTCAGCGT 62.971 60.000 0.00 0.00 36.29 5.07
760 761 1.736365 TTGGTGTCCGTGTCAGCGTA 61.736 55.000 0.00 0.00 36.29 4.42
761 762 1.443872 GGTGTCCGTGTCAGCGTAG 60.444 63.158 0.00 0.00 0.00 3.51
777 778 3.951979 CGTAGCTAATTTTCAGGCTGG 57.048 47.619 15.73 0.00 36.40 4.85
778 779 3.270877 CGTAGCTAATTTTCAGGCTGGT 58.729 45.455 15.73 0.00 36.40 4.00
779 780 3.689649 CGTAGCTAATTTTCAGGCTGGTT 59.310 43.478 15.73 7.52 36.40 3.67
780 781 4.156008 CGTAGCTAATTTTCAGGCTGGTTT 59.844 41.667 15.73 6.08 36.40 3.27
781 782 5.335661 CGTAGCTAATTTTCAGGCTGGTTTT 60.336 40.000 15.73 6.42 36.40 2.43
782 783 6.128117 CGTAGCTAATTTTCAGGCTGGTTTTA 60.128 38.462 15.73 7.20 36.40 1.52
783 784 6.664428 AGCTAATTTTCAGGCTGGTTTTAA 57.336 33.333 15.73 0.00 33.50 1.52
784 785 7.244886 AGCTAATTTTCAGGCTGGTTTTAAT 57.755 32.000 15.73 4.88 33.50 1.40
785 786 8.361169 AGCTAATTTTCAGGCTGGTTTTAATA 57.639 30.769 15.73 0.00 33.50 0.98
786 787 8.981659 AGCTAATTTTCAGGCTGGTTTTAATAT 58.018 29.630 15.73 0.00 33.50 1.28
787 788 9.599866 GCTAATTTTCAGGCTGGTTTTAATATT 57.400 29.630 15.73 10.04 0.00 1.28
790 791 9.791801 AATTTTCAGGCTGGTTTTAATATTTGT 57.208 25.926 15.73 0.00 0.00 2.83
817 818 7.101652 TGAAAGTCCTACTGCTATACTTCAG 57.898 40.000 0.00 0.00 36.45 3.02
821 822 5.766174 AGTCCTACTGCTATACTTCAGCTAC 59.234 44.000 0.00 0.00 39.83 3.58
853 854 1.337635 GCTGTGAGTCAAGTAGCTGCT 60.338 52.381 7.57 7.57 0.00 4.24
856 857 0.610174 TGAGTCAAGTAGCTGCTGGG 59.390 55.000 13.43 0.86 0.00 4.45
861 862 1.160137 CAAGTAGCTGCTGGGTGTTC 58.840 55.000 13.43 0.00 0.00 3.18
865 867 1.185618 TAGCTGCTGGGTGTTCGTCT 61.186 55.000 13.43 0.00 0.00 4.18
869 871 1.069090 GCTGGGTGTTCGTCTGTGA 59.931 57.895 0.00 0.00 0.00 3.58
885 887 5.063880 GTCTGTGACAAGGACAAGGTAATT 58.936 41.667 0.68 0.00 32.09 1.40
888 890 6.042781 TCTGTGACAAGGACAAGGTAATTACT 59.957 38.462 15.05 0.00 0.00 2.24
889 891 7.233962 TCTGTGACAAGGACAAGGTAATTACTA 59.766 37.037 15.05 0.00 0.00 1.82
890 892 7.156673 TGTGACAAGGACAAGGTAATTACTAC 58.843 38.462 15.05 0.00 0.00 2.73
891 893 7.015877 TGTGACAAGGACAAGGTAATTACTACT 59.984 37.037 15.05 2.31 0.00 2.57
892 894 8.526147 GTGACAAGGACAAGGTAATTACTACTA 58.474 37.037 15.05 0.00 0.00 1.82
896 898 9.751542 CAAGGACAAGGTAATTACTACTAGATG 57.248 37.037 15.05 3.73 0.00 2.90
900 902 8.834004 ACAAGGTAATTACTACTAGATGGACA 57.166 34.615 15.05 0.00 0.00 4.02
901 903 8.693625 ACAAGGTAATTACTACTAGATGGACAC 58.306 37.037 15.05 0.00 0.00 3.67
906 908 7.598759 AATTACTACTAGATGGACACGGATT 57.401 36.000 0.00 0.00 0.00 3.01
909 911 2.651455 ACTAGATGGACACGGATTCGA 58.349 47.619 0.00 0.00 40.11 3.71
916 918 6.333416 AGATGGACACGGATTCGATTATATG 58.667 40.000 0.00 0.00 40.11 1.78
941 943 9.166222 TGTTTCTATATATGATGGTAGTTGGGT 57.834 33.333 0.00 0.00 0.00 4.51
966 968 7.629027 TTGATCGAATCAAAGACATAGATCG 57.371 36.000 7.53 0.00 45.57 3.69
967 969 6.970484 TGATCGAATCAAAGACATAGATCGA 58.030 36.000 0.00 0.00 36.86 3.59
968 970 7.425606 TGATCGAATCAAAGACATAGATCGAA 58.574 34.615 0.00 0.00 36.86 3.71
969 971 8.084684 TGATCGAATCAAAGACATAGATCGAAT 58.915 33.333 0.00 0.00 36.86 3.34
970 972 7.859613 TCGAATCAAAGACATAGATCGAATC 57.140 36.000 0.00 0.00 0.00 2.52
971 973 7.425606 TCGAATCAAAGACATAGATCGAATCA 58.574 34.615 0.00 0.00 0.00 2.57
972 974 7.920682 TCGAATCAAAGACATAGATCGAATCAA 59.079 33.333 0.00 0.00 0.00 2.57
973 975 8.213153 CGAATCAAAGACATAGATCGAATCAAG 58.787 37.037 0.00 0.00 0.00 3.02
974 976 7.959689 ATCAAAGACATAGATCGAATCAAGG 57.040 36.000 0.00 0.00 0.00 3.61
975 977 6.878317 TCAAAGACATAGATCGAATCAAGGT 58.122 36.000 0.00 0.00 0.00 3.50
976 978 8.007405 TCAAAGACATAGATCGAATCAAGGTA 57.993 34.615 0.00 0.00 0.00 3.08
977 979 8.474831 TCAAAGACATAGATCGAATCAAGGTAA 58.525 33.333 0.00 0.00 0.00 2.85
979 981 9.838339 AAAGACATAGATCGAATCAAGGTAATT 57.162 29.630 0.00 0.00 0.00 1.40
981 983 9.915629 AGACATAGATCGAATCAAGGTAATTAC 57.084 33.333 7.09 7.09 0.00 1.89
982 984 9.915629 GACATAGATCGAATCAAGGTAATTACT 57.084 33.333 15.05 0.00 0.00 2.24
1005 1035 0.394899 AGTTAGCTGCTCCAATGGCC 60.395 55.000 4.91 0.00 0.00 5.36
1006 1036 1.451927 TTAGCTGCTCCAATGGCCG 60.452 57.895 4.91 0.00 0.00 6.13
1048 1078 0.958382 TTTGGAATTGGAGGACGCGG 60.958 55.000 12.47 0.00 0.00 6.46
1065 1095 2.738643 CGCGGTGAGGTACATGAAGATT 60.739 50.000 0.00 0.00 0.00 2.40
1069 1099 3.941483 GGTGAGGTACATGAAGATTGTGG 59.059 47.826 0.00 0.00 0.00 4.17
1077 1107 1.808411 TGAAGATTGTGGAGAACCGC 58.192 50.000 0.00 0.00 45.91 5.68
1080 1110 0.620556 AGATTGTGGAGAACCGCCAT 59.379 50.000 0.00 0.00 45.20 4.40
1128 1158 3.932710 GCGTCATGGTTGATTACAAGAGA 59.067 43.478 0.00 0.00 36.64 3.10
1139 1173 7.889657 GTTGATTACAAGAGAGGCAGGTATGC 61.890 46.154 0.00 0.00 43.22 3.14
1183 1217 6.130298 TCAACGTATAAATTTGCTCCATGG 57.870 37.500 4.97 4.97 0.00 3.66
1285 1327 1.918293 AGCCCCAACCTCATCGTCA 60.918 57.895 0.00 0.00 0.00 4.35
1329 1371 1.579932 CCACCGGATCCGTCTATCG 59.420 63.158 31.22 17.70 37.81 2.92
1475 1517 9.605275 GTACGTACCTAGTGATCCATACATATA 57.395 37.037 15.00 0.00 0.00 0.86
1538 1587 5.765182 ACCAACTAATATTATGAGCTGTGGC 59.235 40.000 0.00 0.00 39.06 5.01
1553 1602 0.459585 GTGGCTTGATGCATGGCTTG 60.460 55.000 2.46 0.00 45.15 4.01
1554 1603 1.143183 GGCTTGATGCATGGCTTGG 59.857 57.895 2.46 0.00 45.15 3.61
1555 1604 1.324740 GGCTTGATGCATGGCTTGGA 61.325 55.000 2.46 0.00 45.15 3.53
1556 1605 0.750850 GCTTGATGCATGGCTTGGAT 59.249 50.000 2.46 7.10 39.39 3.41
1557 1606 1.138266 GCTTGATGCATGGCTTGGATT 59.862 47.619 2.46 0.00 36.38 3.01
1567 1616 1.397390 GGCTTGGATTCATGGCAGGG 61.397 60.000 8.44 0.00 41.28 4.45
1620 1675 2.444256 GCTGTTCCGGGATAGGCCT 61.444 63.158 11.78 11.78 36.66 5.19
1675 1730 2.902486 AGAGAGCACAAGATCAAGGTCA 59.098 45.455 0.00 0.00 30.99 4.02
1808 1869 7.754027 GGTATACTATTATACTCCAGCAACGTG 59.246 40.741 2.25 0.00 40.02 4.49
1858 1919 5.879237 TCAAGCTTTGCATATTTCGGTAAG 58.121 37.500 0.00 0.00 0.00 2.34
1968 2030 7.284261 TCCAACCTAAATCAATGCAATTATCGA 59.716 33.333 0.00 0.00 32.46 3.59
2014 2076 0.592754 GTATCCTCACTCGCGCTCAC 60.593 60.000 5.56 0.00 0.00 3.51
2033 2095 3.765511 TCACCGTAACATGCTACTACCTT 59.234 43.478 4.83 0.00 0.00 3.50
2107 2170 9.314501 GTCAAACGATCTTACATTTCTTTACAC 57.685 33.333 0.00 0.00 0.00 2.90
2132 2197 9.436957 ACAGAGTATTTTCTAATGTGAAACGAT 57.563 29.630 0.00 0.00 42.39 3.73
2290 2361 6.438763 CGATGGTGCTTTCTAAAGAAAAAGT 58.561 36.000 6.64 0.00 42.72 2.66
2330 2401 4.087892 CTCACCACTCCGGGCCAG 62.088 72.222 4.39 0.00 40.22 4.85
2342 2413 2.436109 GGCCAGTGACATGTGGGT 59.564 61.111 1.15 0.00 34.06 4.51
2345 2416 1.371183 CCAGTGACATGTGGGTCGT 59.629 57.895 1.15 0.00 40.72 4.34
2411 2483 4.051922 GGAAGAAGTGACCGTATATGCAG 58.948 47.826 0.00 0.00 0.00 4.41
2438 2510 8.826710 GCATAGACAAGTTATGTTACTGCAATA 58.173 33.333 0.00 0.00 44.12 1.90
2444 2516 9.950680 ACAAGTTATGTTACTGCAATATAATGC 57.049 29.630 5.79 5.79 42.58 3.56
2457 2529 6.420306 TGCAATATAATGCCGTATTTTGCAAG 59.580 34.615 21.45 0.00 46.31 4.01
2464 2536 3.984633 TGCCGTATTTTGCAAGTTTTAGC 59.015 39.130 0.00 1.44 33.87 3.09
2476 2548 9.810545 TTTGCAAGTTTTAGCACTAAACTAAAT 57.189 25.926 0.00 0.00 41.05 1.40
2477 2549 9.810545 TTGCAAGTTTTAGCACTAAACTAAATT 57.189 25.926 0.00 0.00 41.05 1.82
2478 2550 9.243637 TGCAAGTTTTAGCACTAAACTAAATTG 57.756 29.630 10.12 5.94 38.89 2.32
2479 2551 9.458374 GCAAGTTTTAGCACTAAACTAAATTGA 57.542 29.630 13.50 0.00 38.89 2.57
2525 2597 6.426587 ACTGCCACTGATATTACCTTTTCAT 58.573 36.000 0.00 0.00 0.00 2.57
2547 2619 5.712217 TGTATTCATTAGTTTCGAAGCCG 57.288 39.130 8.51 0.00 37.07 5.52
2672 2777 5.460419 CGAACGGGAGAAAAATCTCATCTAG 59.540 44.000 8.01 0.00 38.44 2.43
2742 2847 6.500684 ACAAATACTAAGCACATCCAACAG 57.499 37.500 0.00 0.00 0.00 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.552337 TGCCTGTTGTGGAAGCAAAAA 59.448 42.857 0.00 0.00 0.00 1.94
1 2 1.134848 GTGCCTGTTGTGGAAGCAAAA 60.135 47.619 0.00 0.00 34.79 2.44
2 3 0.459489 GTGCCTGTTGTGGAAGCAAA 59.541 50.000 0.00 0.00 34.79 3.68
3 4 0.682532 TGTGCCTGTTGTGGAAGCAA 60.683 50.000 0.00 0.00 34.79 3.91
4 5 1.077140 TGTGCCTGTTGTGGAAGCA 60.077 52.632 0.00 0.00 0.00 3.91
5 6 1.656441 CTGTGCCTGTTGTGGAAGC 59.344 57.895 0.00 0.00 0.00 3.86
6 7 1.656441 GCTGTGCCTGTTGTGGAAG 59.344 57.895 0.00 0.00 0.00 3.46
7 8 1.827789 GGCTGTGCCTGTTGTGGAA 60.828 57.895 0.73 0.00 46.69 3.53
8 9 2.203337 GGCTGTGCCTGTTGTGGA 60.203 61.111 0.73 0.00 46.69 4.02
20 21 0.465460 TTTTTGAGAGGCACGGCTGT 60.465 50.000 0.00 0.00 0.00 4.40
21 22 0.883833 ATTTTTGAGAGGCACGGCTG 59.116 50.000 0.00 0.00 0.00 4.85
22 23 0.883833 CATTTTTGAGAGGCACGGCT 59.116 50.000 0.00 0.00 0.00 5.52
23 24 0.881118 TCATTTTTGAGAGGCACGGC 59.119 50.000 0.00 0.00 0.00 5.68
24 25 3.641437 TTTCATTTTTGAGAGGCACGG 57.359 42.857 0.00 0.00 0.00 4.94
54 55 2.540769 CGTGCCTCTTGCGAAAGAAAAA 60.541 45.455 7.40 0.00 45.60 1.94
55 56 1.002900 CGTGCCTCTTGCGAAAGAAAA 60.003 47.619 7.40 0.00 45.60 2.29
56 57 0.586319 CGTGCCTCTTGCGAAAGAAA 59.414 50.000 7.40 0.00 45.60 2.52
57 58 1.227999 CCGTGCCTCTTGCGAAAGAA 61.228 55.000 7.40 0.00 45.60 2.52
58 59 1.667830 CCGTGCCTCTTGCGAAAGA 60.668 57.895 5.53 5.53 45.60 2.52
59 60 1.507141 AACCGTGCCTCTTGCGAAAG 61.507 55.000 0.00 0.00 45.60 2.62
60 61 1.098712 AAACCGTGCCTCTTGCGAAA 61.099 50.000 0.00 0.00 45.60 3.46
61 62 1.098712 AAAACCGTGCCTCTTGCGAA 61.099 50.000 0.00 0.00 45.60 4.70
62 63 1.525077 AAAACCGTGCCTCTTGCGA 60.525 52.632 0.00 0.00 45.60 5.10
63 64 1.370414 CAAAACCGTGCCTCTTGCG 60.370 57.895 0.00 0.00 45.60 4.85
64 65 1.661509 GCAAAACCGTGCCTCTTGC 60.662 57.895 0.00 0.00 38.66 4.01
65 66 4.633980 GCAAAACCGTGCCTCTTG 57.366 55.556 0.00 0.00 38.66 3.02
71 72 1.503818 TTCGAGAGGCAAAACCGTGC 61.504 55.000 0.00 0.00 46.52 5.34
72 73 0.941542 TTTCGAGAGGCAAAACCGTG 59.058 50.000 0.00 0.00 46.52 4.94
73 74 1.332686 GTTTTCGAGAGGCAAAACCGT 59.667 47.619 0.00 0.00 46.52 4.83
74 75 2.032414 GTTTTCGAGAGGCAAAACCG 57.968 50.000 0.00 0.00 46.52 4.44
120 121 2.612200 CGTGCCTCTGACGGAAAAA 58.388 52.632 0.00 0.00 33.08 1.94
121 122 4.354155 CGTGCCTCTGACGGAAAA 57.646 55.556 0.00 0.00 33.08 2.29
126 127 0.234884 GAAAAACCGTGCCTCTGACG 59.765 55.000 0.00 0.00 36.56 4.35
127 128 1.594331 AGAAAAACCGTGCCTCTGAC 58.406 50.000 0.00 0.00 0.00 3.51
128 129 2.341846 AAGAAAAACCGTGCCTCTGA 57.658 45.000 0.00 0.00 0.00 3.27
129 130 2.357637 TGAAAGAAAAACCGTGCCTCTG 59.642 45.455 0.00 0.00 0.00 3.35
130 131 2.357952 GTGAAAGAAAAACCGTGCCTCT 59.642 45.455 0.00 0.00 0.00 3.69
131 132 2.727777 GTGAAAGAAAAACCGTGCCTC 58.272 47.619 0.00 0.00 0.00 4.70
132 133 1.064952 CGTGAAAGAAAAACCGTGCCT 59.935 47.619 0.00 0.00 0.00 4.75
133 134 1.064357 TCGTGAAAGAAAAACCGTGCC 59.936 47.619 0.00 0.00 0.00 5.01
134 135 2.461897 TCGTGAAAGAAAAACCGTGC 57.538 45.000 0.00 0.00 0.00 5.34
144 145 7.786503 GCAAATCCATGCCTTTCGTGAAAGA 62.787 44.000 20.91 5.27 45.52 2.52
145 146 3.855689 AATCCATGCCTTTCGTGAAAG 57.144 42.857 14.05 14.05 45.47 2.62
146 147 3.860378 GCAAATCCATGCCTTTCGTGAAA 60.860 43.478 0.00 0.00 40.49 2.69
147 148 2.352617 GCAAATCCATGCCTTTCGTGAA 60.353 45.455 0.00 0.00 40.49 3.18
148 149 1.202114 GCAAATCCATGCCTTTCGTGA 59.798 47.619 0.00 0.00 40.49 4.35
149 150 1.632422 GCAAATCCATGCCTTTCGTG 58.368 50.000 0.00 0.00 40.49 4.35
168 169 2.914777 GGCAGTGCCTCTAGCGGAAG 62.915 65.000 27.48 0.00 46.69 3.46
169 170 3.019003 GGCAGTGCCTCTAGCGGAA 62.019 63.158 27.48 0.00 46.69 4.30
170 171 3.461773 GGCAGTGCCTCTAGCGGA 61.462 66.667 27.48 0.00 46.69 5.54
182 183 2.377628 TTTTCGAGAGGCACGGCAGT 62.378 55.000 0.00 0.00 0.00 4.40
183 184 1.667830 TTTTCGAGAGGCACGGCAG 60.668 57.895 0.00 0.00 0.00 4.85
184 185 1.959226 GTTTTCGAGAGGCACGGCA 60.959 57.895 0.00 0.00 0.00 5.69
185 186 2.861006 GTTTTCGAGAGGCACGGC 59.139 61.111 0.00 0.00 0.00 5.68
219 220 1.142060 TGCCTCTCGTGGAAGGAAAAA 59.858 47.619 0.00 0.00 0.00 1.94
220 221 0.762418 TGCCTCTCGTGGAAGGAAAA 59.238 50.000 0.00 0.00 0.00 2.29
221 222 0.984230 ATGCCTCTCGTGGAAGGAAA 59.016 50.000 0.00 0.00 0.00 3.13
222 223 0.250234 CATGCCTCTCGTGGAAGGAA 59.750 55.000 0.00 0.00 0.00 3.36
223 224 0.614697 TCATGCCTCTCGTGGAAGGA 60.615 55.000 0.00 0.00 32.54 3.36
224 225 0.460987 GTCATGCCTCTCGTGGAAGG 60.461 60.000 0.00 0.00 32.54 3.46
225 226 0.534412 AGTCATGCCTCTCGTGGAAG 59.466 55.000 0.00 0.00 32.54 3.46
226 227 0.976641 AAGTCATGCCTCTCGTGGAA 59.023 50.000 0.00 0.00 32.54 3.53
227 228 0.976641 AAAGTCATGCCTCTCGTGGA 59.023 50.000 0.00 0.00 32.54 4.02
228 229 1.081892 CAAAGTCATGCCTCTCGTGG 58.918 55.000 0.00 0.00 32.54 4.94
229 230 0.445436 GCAAAGTCATGCCTCTCGTG 59.555 55.000 0.00 0.00 40.49 4.35
230 231 2.846371 GCAAAGTCATGCCTCTCGT 58.154 52.632 0.00 0.00 40.49 4.18
254 255 1.583054 AGCAAAACCGTGTCTCTCAC 58.417 50.000 0.00 0.00 43.03 3.51
255 256 2.210116 GAAGCAAAACCGTGTCTCTCA 58.790 47.619 0.00 0.00 0.00 3.27
256 257 1.531578 GGAAGCAAAACCGTGTCTCTC 59.468 52.381 0.00 0.00 0.00 3.20
257 258 1.134220 TGGAAGCAAAACCGTGTCTCT 60.134 47.619 0.00 0.00 0.00 3.10
258 259 1.305201 TGGAAGCAAAACCGTGTCTC 58.695 50.000 0.00 0.00 0.00 3.36
259 260 1.608590 CATGGAAGCAAAACCGTGTCT 59.391 47.619 0.00 0.00 38.10 3.41
260 261 1.606668 TCATGGAAGCAAAACCGTGTC 59.393 47.619 0.00 0.00 42.02 3.67
261 262 1.608590 CTCATGGAAGCAAAACCGTGT 59.391 47.619 0.00 0.00 42.02 4.49
262 263 1.068333 CCTCATGGAAGCAAAACCGTG 60.068 52.381 0.00 0.00 42.52 4.94
263 264 1.247567 CCTCATGGAAGCAAAACCGT 58.752 50.000 0.00 0.00 34.57 4.83
264 265 0.527565 CCCTCATGGAAGCAAAACCG 59.472 55.000 0.00 0.00 35.39 4.44
265 266 1.923356 TCCCTCATGGAAGCAAAACC 58.077 50.000 0.00 0.00 41.40 3.27
274 275 2.435805 GCAACTCTATGTCCCTCATGGA 59.564 50.000 0.00 0.00 40.77 3.41
275 276 2.437281 AGCAACTCTATGTCCCTCATGG 59.563 50.000 0.00 0.00 37.91 3.66
276 277 3.834489 AGCAACTCTATGTCCCTCATG 57.166 47.619 0.00 0.00 37.91 3.07
277 278 3.135530 GGAAGCAACTCTATGTCCCTCAT 59.864 47.826 0.00 0.00 40.25 2.90
278 279 2.501723 GGAAGCAACTCTATGTCCCTCA 59.498 50.000 0.00 0.00 0.00 3.86
279 280 2.482142 CGGAAGCAACTCTATGTCCCTC 60.482 54.545 0.00 0.00 0.00 4.30
280 281 1.482593 CGGAAGCAACTCTATGTCCCT 59.517 52.381 0.00 0.00 0.00 4.20
281 282 1.941325 CGGAAGCAACTCTATGTCCC 58.059 55.000 0.00 0.00 0.00 4.46
295 296 2.587194 CCATGCCTCTCGCGGAAG 60.587 66.667 6.13 3.71 42.08 3.46
296 297 4.838152 GCCATGCCTCTCGCGGAA 62.838 66.667 6.13 0.00 42.08 4.30
318 319 3.673515 TCGAAAGCCGTTTCCGAGAGG 62.674 57.143 0.00 0.00 46.39 3.69
319 320 0.388134 TCGAAAGCCGTTTCCGAGAG 60.388 55.000 0.00 0.00 39.22 3.20
320 321 0.388134 CTCGAAAGCCGTTTCCGAGA 60.388 55.000 0.00 0.00 41.17 4.04
321 322 0.388134 TCTCGAAAGCCGTTTCCGAG 60.388 55.000 0.00 0.00 40.66 4.63
322 323 0.032403 TTCTCGAAAGCCGTTTCCGA 59.968 50.000 0.00 0.00 39.22 4.55
323 324 0.438830 CTTCTCGAAAGCCGTTTCCG 59.561 55.000 0.00 0.00 39.22 4.30
324 325 0.796927 CCTTCTCGAAAGCCGTTTCC 59.203 55.000 0.00 0.00 39.22 3.13
325 326 1.792006 TCCTTCTCGAAAGCCGTTTC 58.208 50.000 0.00 0.00 39.04 2.78
326 327 2.249844 TTCCTTCTCGAAAGCCGTTT 57.750 45.000 0.00 0.00 39.75 3.60
327 328 2.249844 TTTCCTTCTCGAAAGCCGTT 57.750 45.000 0.00 0.00 39.75 4.44
328 329 2.249844 TTTTCCTTCTCGAAAGCCGT 57.750 45.000 0.00 0.00 39.75 5.68
345 346 1.419381 ACCAAACCGGGAGCATTTTT 58.581 45.000 6.32 0.00 40.22 1.94
346 347 1.419381 AACCAAACCGGGAGCATTTT 58.581 45.000 6.32 0.00 40.22 1.82
347 348 1.419381 AAACCAAACCGGGAGCATTT 58.581 45.000 6.32 0.00 40.22 2.32
348 349 1.419381 AAAACCAAACCGGGAGCATT 58.581 45.000 6.32 0.00 40.22 3.56
349 350 1.419381 AAAAACCAAACCGGGAGCAT 58.581 45.000 6.32 0.00 40.22 3.79
350 351 2.903404 AAAAACCAAACCGGGAGCA 58.097 47.368 6.32 0.00 40.22 4.26
365 366 8.684973 TTTTCACGAAAAGAACCGAATAAAAA 57.315 26.923 0.83 0.00 35.57 1.94
366 367 8.684973 TTTTTCACGAAAAGAACCGAATAAAA 57.315 26.923 5.21 0.00 40.83 1.52
404 405 9.965902 AACTAGATCTCATGTTGATAGGTTTTT 57.034 29.630 0.00 0.00 0.00 1.94
405 406 9.965902 AAACTAGATCTCATGTTGATAGGTTTT 57.034 29.630 0.00 0.00 0.00 2.43
406 407 9.388506 CAAACTAGATCTCATGTTGATAGGTTT 57.611 33.333 0.00 7.50 0.00 3.27
407 408 8.762645 TCAAACTAGATCTCATGTTGATAGGTT 58.237 33.333 0.00 0.00 0.00 3.50
408 409 8.311395 TCAAACTAGATCTCATGTTGATAGGT 57.689 34.615 0.00 0.00 0.00 3.08
409 410 9.258826 CTTCAAACTAGATCTCATGTTGATAGG 57.741 37.037 0.00 0.00 0.00 2.57
412 413 9.902684 AATCTTCAAACTAGATCTCATGTTGAT 57.097 29.630 0.00 0.00 31.28 2.57
413 414 9.730705 AAATCTTCAAACTAGATCTCATGTTGA 57.269 29.630 0.00 2.78 31.28 3.18
414 415 9.770503 CAAATCTTCAAACTAGATCTCATGTTG 57.229 33.333 0.00 0.22 31.28 3.33
415 416 8.954350 CCAAATCTTCAAACTAGATCTCATGTT 58.046 33.333 0.00 0.43 31.28 2.71
416 417 8.324306 TCCAAATCTTCAAACTAGATCTCATGT 58.676 33.333 0.00 0.00 31.28 3.21
417 418 8.610896 GTCCAAATCTTCAAACTAGATCTCATG 58.389 37.037 0.00 0.00 31.28 3.07
418 419 7.493971 CGTCCAAATCTTCAAACTAGATCTCAT 59.506 37.037 0.00 0.00 31.28 2.90
419 420 6.813649 CGTCCAAATCTTCAAACTAGATCTCA 59.186 38.462 0.00 0.00 31.28 3.27
420 421 6.814146 ACGTCCAAATCTTCAAACTAGATCTC 59.186 38.462 0.00 0.00 31.28 2.75
421 422 6.591834 CACGTCCAAATCTTCAAACTAGATCT 59.408 38.462 0.00 0.00 31.28 2.75
422 423 6.590292 TCACGTCCAAATCTTCAAACTAGATC 59.410 38.462 0.00 0.00 31.28 2.75
423 424 6.464222 TCACGTCCAAATCTTCAAACTAGAT 58.536 36.000 0.00 0.00 33.87 1.98
424 425 5.849510 TCACGTCCAAATCTTCAAACTAGA 58.150 37.500 0.00 0.00 0.00 2.43
425 426 5.120830 CCTCACGTCCAAATCTTCAAACTAG 59.879 44.000 0.00 0.00 0.00 2.57
426 427 4.994852 CCTCACGTCCAAATCTTCAAACTA 59.005 41.667 0.00 0.00 0.00 2.24
427 428 3.815401 CCTCACGTCCAAATCTTCAAACT 59.185 43.478 0.00 0.00 0.00 2.66
428 429 3.813166 TCCTCACGTCCAAATCTTCAAAC 59.187 43.478 0.00 0.00 0.00 2.93
429 430 4.079980 TCCTCACGTCCAAATCTTCAAA 57.920 40.909 0.00 0.00 0.00 2.69
430 431 3.762407 TCCTCACGTCCAAATCTTCAA 57.238 42.857 0.00 0.00 0.00 2.69
431 432 3.762407 TTCCTCACGTCCAAATCTTCA 57.238 42.857 0.00 0.00 0.00 3.02
432 433 3.623510 GGATTCCTCACGTCCAAATCTTC 59.376 47.826 0.00 0.00 32.23 2.87
433 434 3.009033 TGGATTCCTCACGTCCAAATCTT 59.991 43.478 3.95 0.00 38.99 2.40
434 435 2.571653 TGGATTCCTCACGTCCAAATCT 59.428 45.455 3.95 0.00 38.99 2.40
435 436 2.985896 TGGATTCCTCACGTCCAAATC 58.014 47.619 3.95 0.00 38.99 2.17
436 437 3.433306 TTGGATTCCTCACGTCCAAAT 57.567 42.857 3.95 0.00 46.07 2.32
437 438 2.940994 TTGGATTCCTCACGTCCAAA 57.059 45.000 3.95 0.00 46.07 3.28
439 440 1.905894 TCATTGGATTCCTCACGTCCA 59.094 47.619 3.95 0.00 40.13 4.02
440 441 2.691409 TCATTGGATTCCTCACGTCC 57.309 50.000 3.95 0.00 0.00 4.79
441 442 3.797039 TCATCATTGGATTCCTCACGTC 58.203 45.455 3.95 0.00 0.00 4.34
442 443 3.912496 TCATCATTGGATTCCTCACGT 57.088 42.857 3.95 0.00 0.00 4.49
443 444 5.565592 TTTTCATCATTGGATTCCTCACG 57.434 39.130 3.95 0.00 0.00 4.35
444 445 6.127253 ACCATTTTCATCATTGGATTCCTCAC 60.127 38.462 3.95 0.00 33.36 3.51
445 446 5.959594 ACCATTTTCATCATTGGATTCCTCA 59.040 36.000 3.95 0.00 33.36 3.86
446 447 6.475596 ACCATTTTCATCATTGGATTCCTC 57.524 37.500 3.95 0.00 33.36 3.71
447 448 6.879367 AACCATTTTCATCATTGGATTCCT 57.121 33.333 3.95 0.00 33.36 3.36
448 449 9.101655 CTTTAACCATTTTCATCATTGGATTCC 57.898 33.333 0.00 0.00 33.36 3.01
449 450 9.874205 TCTTTAACCATTTTCATCATTGGATTC 57.126 29.630 0.00 0.00 33.36 2.52
456 457 9.657419 GTCCAATTCTTTAACCATTTTCATCAT 57.343 29.630 0.00 0.00 0.00 2.45
457 458 7.812191 CGTCCAATTCTTTAACCATTTTCATCA 59.188 33.333 0.00 0.00 0.00 3.07
458 459 7.201435 GCGTCCAATTCTTTAACCATTTTCATC 60.201 37.037 0.00 0.00 0.00 2.92
459 460 6.589907 GCGTCCAATTCTTTAACCATTTTCAT 59.410 34.615 0.00 0.00 0.00 2.57
460 461 5.923684 GCGTCCAATTCTTTAACCATTTTCA 59.076 36.000 0.00 0.00 0.00 2.69
461 462 5.923684 TGCGTCCAATTCTTTAACCATTTTC 59.076 36.000 0.00 0.00 0.00 2.29
462 463 5.694458 GTGCGTCCAATTCTTTAACCATTTT 59.306 36.000 0.00 0.00 0.00 1.82
463 464 5.227152 GTGCGTCCAATTCTTTAACCATTT 58.773 37.500 0.00 0.00 0.00 2.32
464 465 4.614993 CGTGCGTCCAATTCTTTAACCATT 60.615 41.667 0.00 0.00 0.00 3.16
465 466 3.119990 CGTGCGTCCAATTCTTTAACCAT 60.120 43.478 0.00 0.00 0.00 3.55
466 467 2.224549 CGTGCGTCCAATTCTTTAACCA 59.775 45.455 0.00 0.00 0.00 3.67
467 468 2.481185 TCGTGCGTCCAATTCTTTAACC 59.519 45.455 0.00 0.00 0.00 2.85
468 469 3.799137 TCGTGCGTCCAATTCTTTAAC 57.201 42.857 0.00 0.00 0.00 2.01
469 470 5.365403 AAATCGTGCGTCCAATTCTTTAA 57.635 34.783 0.00 0.00 0.00 1.52
470 471 6.483385 TTAAATCGTGCGTCCAATTCTTTA 57.517 33.333 0.00 0.00 0.00 1.85
471 472 3.915437 AAATCGTGCGTCCAATTCTTT 57.085 38.095 0.00 0.00 0.00 2.52
472 473 5.365403 TTTAAATCGTGCGTCCAATTCTT 57.635 34.783 0.00 0.00 0.00 2.52
473 474 5.180492 TCTTTTAAATCGTGCGTCCAATTCT 59.820 36.000 0.00 0.00 0.00 2.40
474 475 5.387279 TCTTTTAAATCGTGCGTCCAATTC 58.613 37.500 0.00 0.00 0.00 2.17
475 476 5.365403 TCTTTTAAATCGTGCGTCCAATT 57.635 34.783 0.00 0.00 0.00 2.32
476 477 5.560966 ATCTTTTAAATCGTGCGTCCAAT 57.439 34.783 0.00 0.00 0.00 3.16
477 478 6.483385 TTATCTTTTAAATCGTGCGTCCAA 57.517 33.333 0.00 0.00 0.00 3.53
478 479 6.483385 TTTATCTTTTAAATCGTGCGTCCA 57.517 33.333 0.00 0.00 0.00 4.02
479 480 6.797995 TGTTTTATCTTTTAAATCGTGCGTCC 59.202 34.615 0.00 0.00 0.00 4.79
480 481 7.532884 ACTGTTTTATCTTTTAAATCGTGCGTC 59.467 33.333 0.00 0.00 0.00 5.19
481 482 7.357303 ACTGTTTTATCTTTTAAATCGTGCGT 58.643 30.769 0.00 0.00 0.00 5.24
482 483 7.775729 ACTGTTTTATCTTTTAAATCGTGCG 57.224 32.000 0.00 0.00 0.00 5.34
483 484 8.355806 CGAACTGTTTTATCTTTTAAATCGTGC 58.644 33.333 0.00 0.00 0.00 5.34
484 485 9.588774 TCGAACTGTTTTATCTTTTAAATCGTG 57.411 29.630 0.00 0.00 0.00 4.35
499 500 8.388103 CGTAGATCCATTTATTCGAACTGTTTT 58.612 33.333 0.00 0.00 0.00 2.43
500 501 7.762615 TCGTAGATCCATTTATTCGAACTGTTT 59.237 33.333 0.00 0.00 0.00 2.83
501 502 7.262772 TCGTAGATCCATTTATTCGAACTGTT 58.737 34.615 0.00 0.00 0.00 3.16
502 503 6.802608 TCGTAGATCCATTTATTCGAACTGT 58.197 36.000 0.00 0.00 0.00 3.55
503 504 7.139392 TCTCGTAGATCCATTTATTCGAACTG 58.861 38.462 0.00 0.00 33.89 3.16
504 505 7.273320 TCTCGTAGATCCATTTATTCGAACT 57.727 36.000 0.00 0.00 33.89 3.01
505 506 7.925703 TTCTCGTAGATCCATTTATTCGAAC 57.074 36.000 0.00 0.00 33.89 3.95
506 507 8.936070 TTTTCTCGTAGATCCATTTATTCGAA 57.064 30.769 0.00 0.00 33.89 3.71
507 508 7.652105 CCTTTTCTCGTAGATCCATTTATTCGA 59.348 37.037 0.00 0.00 33.89 3.71
508 509 7.652105 TCCTTTTCTCGTAGATCCATTTATTCG 59.348 37.037 0.00 0.00 33.89 3.34
509 510 8.888579 TCCTTTTCTCGTAGATCCATTTATTC 57.111 34.615 0.00 0.00 33.89 1.75
510 511 9.681062 TTTCCTTTTCTCGTAGATCCATTTATT 57.319 29.630 0.00 0.00 33.89 1.40
511 512 9.110502 GTTTCCTTTTCTCGTAGATCCATTTAT 57.889 33.333 0.00 0.00 33.89 1.40
512 513 8.319146 AGTTTCCTTTTCTCGTAGATCCATTTA 58.681 33.333 0.00 0.00 33.89 1.40
513 514 7.168905 AGTTTCCTTTTCTCGTAGATCCATTT 58.831 34.615 0.00 0.00 33.89 2.32
514 515 6.712276 AGTTTCCTTTTCTCGTAGATCCATT 58.288 36.000 0.00 0.00 33.89 3.16
515 516 6.301169 AGTTTCCTTTTCTCGTAGATCCAT 57.699 37.500 0.00 0.00 33.89 3.41
516 517 5.740290 AGTTTCCTTTTCTCGTAGATCCA 57.260 39.130 0.00 0.00 33.89 3.41
517 518 5.581479 GGAAGTTTCCTTTTCTCGTAGATCC 59.419 44.000 3.63 0.00 44.11 3.36
518 519 6.650239 GGAAGTTTCCTTTTCTCGTAGATC 57.350 41.667 3.63 0.00 44.11 2.75
533 534 1.398692 TGTGGCAACCTGGAAGTTTC 58.601 50.000 0.00 0.00 0.00 2.78
534 535 1.859302 TTGTGGCAACCTGGAAGTTT 58.141 45.000 0.00 0.00 0.00 2.66
535 536 1.859302 TTTGTGGCAACCTGGAAGTT 58.141 45.000 0.00 0.00 0.00 2.66
536 537 1.688197 CATTTGTGGCAACCTGGAAGT 59.312 47.619 0.00 0.00 0.00 3.01
537 538 1.962807 TCATTTGTGGCAACCTGGAAG 59.037 47.619 0.00 0.00 0.00 3.46
538 539 1.686052 GTCATTTGTGGCAACCTGGAA 59.314 47.619 0.00 0.00 0.00 3.53
539 540 1.327303 GTCATTTGTGGCAACCTGGA 58.673 50.000 0.00 0.00 0.00 3.86
540 541 1.039068 TGTCATTTGTGGCAACCTGG 58.961 50.000 0.00 0.00 0.00 4.45
541 542 1.600164 CGTGTCATTTGTGGCAACCTG 60.600 52.381 0.00 0.00 0.00 4.00
542 543 0.667993 CGTGTCATTTGTGGCAACCT 59.332 50.000 0.00 0.00 0.00 3.50
543 544 0.939106 GCGTGTCATTTGTGGCAACC 60.939 55.000 0.00 0.00 0.00 3.77
544 545 1.268113 CGCGTGTCATTTGTGGCAAC 61.268 55.000 0.00 0.00 0.00 4.17
545 546 1.009108 CGCGTGTCATTTGTGGCAA 60.009 52.632 0.00 0.00 0.00 4.52
546 547 2.111932 GACGCGTGTCATTTGTGGCA 62.112 55.000 20.70 0.00 44.82 4.92
547 548 1.440353 GACGCGTGTCATTTGTGGC 60.440 57.895 20.70 0.00 44.82 5.01
548 549 4.818417 GACGCGTGTCATTTGTGG 57.182 55.556 20.70 0.00 44.82 4.17
557 558 0.738063 TTGTGACAAGTGACGCGTGT 60.738 50.000 20.70 8.02 42.31 4.49
558 559 0.315059 GTTGTGACAAGTGACGCGTG 60.315 55.000 20.70 3.72 0.00 5.34
559 560 1.426041 GGTTGTGACAAGTGACGCGT 61.426 55.000 13.85 13.85 0.00 6.01
560 561 1.151777 AGGTTGTGACAAGTGACGCG 61.152 55.000 3.53 3.53 0.00 6.01
561 562 0.304705 CAGGTTGTGACAAGTGACGC 59.695 55.000 0.00 0.00 0.00 5.19
562 563 1.860950 CTCAGGTTGTGACAAGTGACG 59.139 52.381 0.00 0.00 0.00 4.35
563 564 3.179443 TCTCAGGTTGTGACAAGTGAC 57.821 47.619 0.00 0.00 0.00 3.67
564 565 3.450817 TCTTCTCAGGTTGTGACAAGTGA 59.549 43.478 0.00 4.21 33.90 3.41
565 566 3.797039 TCTTCTCAGGTTGTGACAAGTG 58.203 45.455 0.00 0.00 33.90 3.16
566 567 4.696479 ATCTTCTCAGGTTGTGACAAGT 57.304 40.909 0.00 0.00 33.90 3.16
567 568 4.623167 CGTATCTTCTCAGGTTGTGACAAG 59.377 45.833 0.00 0.00 33.58 3.16
568 569 4.279922 TCGTATCTTCTCAGGTTGTGACAA 59.720 41.667 0.00 0.00 0.00 3.18
569 570 3.824443 TCGTATCTTCTCAGGTTGTGACA 59.176 43.478 0.00 0.00 0.00 3.58
570 571 4.436242 TCGTATCTTCTCAGGTTGTGAC 57.564 45.455 0.00 0.00 0.00 3.67
571 572 5.185056 TCAATCGTATCTTCTCAGGTTGTGA 59.815 40.000 0.00 0.00 0.00 3.58
572 573 5.410924 TCAATCGTATCTTCTCAGGTTGTG 58.589 41.667 0.00 0.00 0.00 3.33
573 574 5.661056 TCAATCGTATCTTCTCAGGTTGT 57.339 39.130 0.00 0.00 0.00 3.32
574 575 8.824159 AATATCAATCGTATCTTCTCAGGTTG 57.176 34.615 0.00 0.00 0.00 3.77
575 576 9.265901 CAAATATCAATCGTATCTTCTCAGGTT 57.734 33.333 0.00 0.00 0.00 3.50
576 577 8.642432 TCAAATATCAATCGTATCTTCTCAGGT 58.358 33.333 0.00 0.00 0.00 4.00
577 578 9.138062 CTCAAATATCAATCGTATCTTCTCAGG 57.862 37.037 0.00 0.00 0.00 3.86
578 579 9.905171 TCTCAAATATCAATCGTATCTTCTCAG 57.095 33.333 0.00 0.00 0.00 3.35
579 580 9.905171 CTCTCAAATATCAATCGTATCTTCTCA 57.095 33.333 0.00 0.00 0.00 3.27
580 581 9.352784 CCTCTCAAATATCAATCGTATCTTCTC 57.647 37.037 0.00 0.00 0.00 2.87
581 582 8.865090 ACCTCTCAAATATCAATCGTATCTTCT 58.135 33.333 0.00 0.00 0.00 2.85
583 584 9.915629 GTACCTCTCAAATATCAATCGTATCTT 57.084 33.333 0.00 0.00 0.00 2.40
584 585 9.303116 AGTACCTCTCAAATATCAATCGTATCT 57.697 33.333 0.00 0.00 0.00 1.98
585 586 9.562583 GAGTACCTCTCAAATATCAATCGTATC 57.437 37.037 0.00 0.00 42.34 2.24
601 602 9.255304 GAAATCACTAATTGATGAGTACCTCTC 57.745 37.037 0.00 0.00 44.86 3.20
602 603 7.923344 CGAAATCACTAATTGATGAGTACCTCT 59.077 37.037 0.00 0.00 44.86 3.69
603 604 7.306866 GCGAAATCACTAATTGATGAGTACCTC 60.307 40.741 0.00 0.00 44.86 3.85
604 605 6.480320 GCGAAATCACTAATTGATGAGTACCT 59.520 38.462 0.00 0.00 44.86 3.08
605 606 6.292919 GGCGAAATCACTAATTGATGAGTACC 60.293 42.308 0.00 0.00 44.86 3.34
606 607 6.292919 GGGCGAAATCACTAATTGATGAGTAC 60.293 42.308 0.00 0.00 44.86 2.73
607 608 5.758296 GGGCGAAATCACTAATTGATGAGTA 59.242 40.000 0.00 0.00 44.86 2.59
608 609 4.576463 GGGCGAAATCACTAATTGATGAGT 59.424 41.667 0.00 0.00 44.86 3.41
609 610 4.023707 GGGGCGAAATCACTAATTGATGAG 60.024 45.833 0.00 0.00 44.86 2.90
610 611 3.882888 GGGGCGAAATCACTAATTGATGA 59.117 43.478 0.00 0.00 44.86 2.92
611 612 3.885297 AGGGGCGAAATCACTAATTGATG 59.115 43.478 0.00 0.00 44.86 3.07
613 614 3.644966 AGGGGCGAAATCACTAATTGA 57.355 42.857 0.00 0.00 39.11 2.57
614 615 5.357032 AGTTTAGGGGCGAAATCACTAATTG 59.643 40.000 0.00 0.00 0.00 2.32
615 616 5.357032 CAGTTTAGGGGCGAAATCACTAATT 59.643 40.000 0.00 0.00 0.00 1.40
616 617 4.881850 CAGTTTAGGGGCGAAATCACTAAT 59.118 41.667 0.00 0.00 0.00 1.73
617 618 4.020039 TCAGTTTAGGGGCGAAATCACTAA 60.020 41.667 0.00 0.00 0.00 2.24
618 619 3.516300 TCAGTTTAGGGGCGAAATCACTA 59.484 43.478 0.00 0.00 0.00 2.74
619 620 2.304761 TCAGTTTAGGGGCGAAATCACT 59.695 45.455 0.00 0.00 0.00 3.41
620 621 2.706890 TCAGTTTAGGGGCGAAATCAC 58.293 47.619 0.00 0.00 0.00 3.06
621 622 3.054728 TGATCAGTTTAGGGGCGAAATCA 60.055 43.478 0.00 0.00 0.00 2.57
622 623 3.541632 TGATCAGTTTAGGGGCGAAATC 58.458 45.455 0.00 0.00 0.00 2.17
623 624 3.644966 TGATCAGTTTAGGGGCGAAAT 57.355 42.857 0.00 0.00 0.00 2.17
624 625 3.343617 CTTGATCAGTTTAGGGGCGAAA 58.656 45.455 0.00 0.00 0.00 3.46
625 626 2.939640 GCTTGATCAGTTTAGGGGCGAA 60.940 50.000 0.00 0.00 0.00 4.70
626 627 1.406887 GCTTGATCAGTTTAGGGGCGA 60.407 52.381 0.00 0.00 0.00 5.54
627 628 1.017387 GCTTGATCAGTTTAGGGGCG 58.983 55.000 0.00 0.00 0.00 6.13
628 629 2.293170 GAGCTTGATCAGTTTAGGGGC 58.707 52.381 0.00 0.00 0.00 5.80
629 630 3.539604 CTGAGCTTGATCAGTTTAGGGG 58.460 50.000 7.63 0.00 41.52 4.79
638 639 4.192429 TCGATTTCACTGAGCTTGATCA 57.808 40.909 0.00 0.00 0.00 2.92
639 640 5.404968 CCTATCGATTTCACTGAGCTTGATC 59.595 44.000 1.71 0.00 0.00 2.92
640 641 5.295950 CCTATCGATTTCACTGAGCTTGAT 58.704 41.667 1.71 0.00 0.00 2.57
641 642 4.686972 CCTATCGATTTCACTGAGCTTGA 58.313 43.478 1.71 0.00 0.00 3.02
642 643 3.247173 GCCTATCGATTTCACTGAGCTTG 59.753 47.826 1.71 0.00 0.00 4.01
643 644 3.462021 GCCTATCGATTTCACTGAGCTT 58.538 45.455 1.71 0.00 0.00 3.74
644 645 2.224161 GGCCTATCGATTTCACTGAGCT 60.224 50.000 1.71 0.00 0.00 4.09
645 646 2.139118 GGCCTATCGATTTCACTGAGC 58.861 52.381 1.71 0.00 0.00 4.26
646 647 2.760374 GGGCCTATCGATTTCACTGAG 58.240 52.381 1.71 0.00 0.00 3.35
647 648 1.068588 CGGGCCTATCGATTTCACTGA 59.931 52.381 1.71 0.00 0.00 3.41
648 649 1.202533 ACGGGCCTATCGATTTCACTG 60.203 52.381 1.71 0.13 0.00 3.66
649 650 1.068741 GACGGGCCTATCGATTTCACT 59.931 52.381 1.71 0.00 0.00 3.41
650 651 1.068741 AGACGGGCCTATCGATTTCAC 59.931 52.381 1.71 0.00 0.00 3.18
651 652 1.410004 AGACGGGCCTATCGATTTCA 58.590 50.000 1.71 0.00 0.00 2.69
652 653 2.557490 AGTAGACGGGCCTATCGATTTC 59.443 50.000 1.71 0.00 0.00 2.17
653 654 2.296471 CAGTAGACGGGCCTATCGATTT 59.704 50.000 1.71 0.00 0.00 2.17
654 655 1.887198 CAGTAGACGGGCCTATCGATT 59.113 52.381 1.71 0.00 0.00 3.34
655 656 1.535833 CAGTAGACGGGCCTATCGAT 58.464 55.000 0.84 2.16 0.00 3.59
656 657 0.536687 CCAGTAGACGGGCCTATCGA 60.537 60.000 0.84 0.00 0.00 3.59
657 658 0.536687 TCCAGTAGACGGGCCTATCG 60.537 60.000 0.84 0.00 0.00 2.92
658 659 1.614413 CTTCCAGTAGACGGGCCTATC 59.386 57.143 0.84 0.00 0.00 2.08
659 660 1.705873 CTTCCAGTAGACGGGCCTAT 58.294 55.000 0.84 0.00 0.00 2.57
660 661 1.041447 GCTTCCAGTAGACGGGCCTA 61.041 60.000 0.84 0.00 0.00 3.93
661 662 2.359967 GCTTCCAGTAGACGGGCCT 61.360 63.158 0.84 0.00 0.00 5.19
662 663 2.180159 TTGCTTCCAGTAGACGGGCC 62.180 60.000 0.00 0.00 0.00 5.80
663 664 1.019805 GTTGCTTCCAGTAGACGGGC 61.020 60.000 0.00 0.00 0.00 6.13
664 665 0.391263 GGTTGCTTCCAGTAGACGGG 60.391 60.000 0.00 0.00 0.00 5.28
665 666 0.608640 AGGTTGCTTCCAGTAGACGG 59.391 55.000 0.00 0.00 0.00 4.79
666 667 1.714794 CAGGTTGCTTCCAGTAGACG 58.285 55.000 1.12 0.00 0.00 4.18
667 668 1.443802 GCAGGTTGCTTCCAGTAGAC 58.556 55.000 0.00 0.00 40.96 2.59
668 669 0.037326 CGCAGGTTGCTTCCAGTAGA 60.037 55.000 0.00 0.00 42.25 2.59
669 670 1.639298 GCGCAGGTTGCTTCCAGTAG 61.639 60.000 0.30 0.00 42.25 2.57
670 671 1.671054 GCGCAGGTTGCTTCCAGTA 60.671 57.895 0.30 0.00 42.25 2.74
671 672 2.980233 GCGCAGGTTGCTTCCAGT 60.980 61.111 0.30 0.00 42.25 4.00
672 673 4.093952 CGCGCAGGTTGCTTCCAG 62.094 66.667 8.75 0.00 42.25 3.86
673 674 2.796483 ATACGCGCAGGTTGCTTCCA 62.796 55.000 5.73 0.00 42.25 3.53
674 675 2.106683 ATACGCGCAGGTTGCTTCC 61.107 57.895 5.73 0.00 42.25 3.46
675 676 1.060937 CATACGCGCAGGTTGCTTC 59.939 57.895 5.73 0.00 42.25 3.86
676 677 3.039202 GCATACGCGCAGGTTGCTT 62.039 57.895 5.73 0.00 42.25 3.91
677 678 2.572095 TAGCATACGCGCAGGTTGCT 62.572 55.000 22.22 22.22 45.10 3.91
678 679 2.094126 CTAGCATACGCGCAGGTTGC 62.094 60.000 5.73 10.86 45.49 4.17
679 680 1.490693 CCTAGCATACGCGCAGGTTG 61.491 60.000 5.73 2.74 45.49 3.77
680 681 1.227263 CCTAGCATACGCGCAGGTT 60.227 57.895 5.73 0.00 45.49 3.50
681 682 2.417516 CCTAGCATACGCGCAGGT 59.582 61.111 5.73 4.25 45.49 4.00
682 683 3.038417 GCCTAGCATACGCGCAGG 61.038 66.667 5.73 5.66 45.49 4.85
683 684 3.398134 CGCCTAGCATACGCGCAG 61.398 66.667 5.73 2.42 45.49 5.18
684 685 3.824117 CTCGCCTAGCATACGCGCA 62.824 63.158 5.73 0.00 43.96 6.09
685 686 3.100191 CTCGCCTAGCATACGCGC 61.100 66.667 5.73 0.00 43.96 6.86
686 687 2.402282 TTCCTCGCCTAGCATACGCG 62.402 60.000 3.53 3.53 45.29 6.01
687 688 0.038159 ATTCCTCGCCTAGCATACGC 60.038 55.000 0.00 0.00 38.99 4.42
688 689 2.159366 CCTATTCCTCGCCTAGCATACG 60.159 54.545 0.00 0.00 0.00 3.06
689 690 3.090037 TCCTATTCCTCGCCTAGCATAC 58.910 50.000 0.00 0.00 0.00 2.39
690 691 3.090037 GTCCTATTCCTCGCCTAGCATA 58.910 50.000 0.00 0.00 0.00 3.14
691 692 1.896465 GTCCTATTCCTCGCCTAGCAT 59.104 52.381 0.00 0.00 0.00 3.79
692 693 1.329256 GTCCTATTCCTCGCCTAGCA 58.671 55.000 0.00 0.00 0.00 3.49
693 694 0.241481 CGTCCTATTCCTCGCCTAGC 59.759 60.000 0.00 0.00 0.00 3.42
694 695 1.536331 GTCGTCCTATTCCTCGCCTAG 59.464 57.143 0.00 0.00 0.00 3.02
695 696 1.142465 AGTCGTCCTATTCCTCGCCTA 59.858 52.381 0.00 0.00 0.00 3.93
696 697 0.106619 AGTCGTCCTATTCCTCGCCT 60.107 55.000 0.00 0.00 0.00 5.52
697 698 0.311477 GAGTCGTCCTATTCCTCGCC 59.689 60.000 0.00 0.00 0.00 5.54
698 699 0.041135 CGAGTCGTCCTATTCCTCGC 60.041 60.000 3.82 0.00 38.61 5.03
700 701 2.220593 CGTACGAGTCGTCCTATTCCTC 59.779 54.545 23.66 2.21 41.54 3.71
701 702 2.208431 CGTACGAGTCGTCCTATTCCT 58.792 52.381 23.66 0.00 41.54 3.36
702 703 1.936547 ACGTACGAGTCGTCCTATTCC 59.063 52.381 23.66 1.86 41.54 3.01
703 704 4.108886 GTACGTACGAGTCGTCCTATTC 57.891 50.000 23.66 6.22 41.54 1.75
717 718 0.665369 ACAGGCAAGCACGTACGTAC 60.665 55.000 22.34 16.33 0.00 3.67
718 719 0.665068 CACAGGCAAGCACGTACGTA 60.665 55.000 22.34 0.00 0.00 3.57
719 720 1.954146 CACAGGCAAGCACGTACGT 60.954 57.895 16.72 16.72 0.00 3.57
720 721 2.853210 CACAGGCAAGCACGTACG 59.147 61.111 15.01 15.01 0.00 3.67
721 722 1.901650 GAGCACAGGCAAGCACGTAC 61.902 60.000 0.00 0.00 44.61 3.67
722 723 1.667830 GAGCACAGGCAAGCACGTA 60.668 57.895 0.00 0.00 44.61 3.57
723 724 2.947938 AAGAGCACAGGCAAGCACGT 62.948 55.000 0.00 0.00 44.61 4.49
724 725 2.256591 AAGAGCACAGGCAAGCACG 61.257 57.895 0.00 0.00 44.61 5.34
725 726 1.285023 CAAGAGCACAGGCAAGCAC 59.715 57.895 0.00 0.00 44.61 4.40
726 727 1.900016 CCAAGAGCACAGGCAAGCA 60.900 57.895 0.00 0.00 44.61 3.91
727 728 1.900498 ACCAAGAGCACAGGCAAGC 60.900 57.895 0.00 0.00 44.61 4.01
728 729 0.820891 ACACCAAGAGCACAGGCAAG 60.821 55.000 0.00 0.00 44.61 4.01
729 730 0.819259 GACACCAAGAGCACAGGCAA 60.819 55.000 0.00 0.00 44.61 4.52
730 731 1.227943 GACACCAAGAGCACAGGCA 60.228 57.895 0.00 0.00 44.61 4.75
731 732 1.968540 GGACACCAAGAGCACAGGC 60.969 63.158 0.00 0.00 41.61 4.85
732 733 1.669115 CGGACACCAAGAGCACAGG 60.669 63.158 0.00 0.00 0.00 4.00
733 734 1.069765 ACGGACACCAAGAGCACAG 59.930 57.895 0.00 0.00 0.00 3.66
734 735 1.227527 CACGGACACCAAGAGCACA 60.228 57.895 0.00 0.00 0.00 4.57
735 736 1.222115 GACACGGACACCAAGAGCAC 61.222 60.000 0.00 0.00 0.00 4.40
736 737 1.069090 GACACGGACACCAAGAGCA 59.931 57.895 0.00 0.00 0.00 4.26
737 738 0.946221 CTGACACGGACACCAAGAGC 60.946 60.000 0.00 0.00 0.00 4.09
738 739 0.946221 GCTGACACGGACACCAAGAG 60.946 60.000 0.00 0.00 0.00 2.85
739 740 1.069090 GCTGACACGGACACCAAGA 59.931 57.895 0.00 0.00 0.00 3.02
740 741 2.310233 CGCTGACACGGACACCAAG 61.310 63.158 0.00 0.00 0.00 3.61
741 742 1.736365 TACGCTGACACGGACACCAA 61.736 55.000 0.00 0.00 37.37 3.67
742 743 2.137425 CTACGCTGACACGGACACCA 62.137 60.000 0.00 0.00 37.37 4.17
743 744 1.443872 CTACGCTGACACGGACACC 60.444 63.158 0.00 0.00 37.37 4.16
744 745 2.087009 GCTACGCTGACACGGACAC 61.087 63.158 0.00 0.00 37.37 3.67
745 746 0.956902 TAGCTACGCTGACACGGACA 60.957 55.000 0.00 0.00 40.10 4.02
746 747 0.169672 TTAGCTACGCTGACACGGAC 59.830 55.000 0.00 0.00 40.10 4.79
747 748 1.100510 ATTAGCTACGCTGACACGGA 58.899 50.000 0.00 0.00 40.10 4.69
748 749 1.922570 AATTAGCTACGCTGACACGG 58.077 50.000 0.00 0.00 40.10 4.94
749 750 3.366724 TGAAAATTAGCTACGCTGACACG 59.633 43.478 0.00 0.00 40.10 4.49
750 751 4.201724 CCTGAAAATTAGCTACGCTGACAC 60.202 45.833 0.00 0.00 40.10 3.67
751 752 3.932710 CCTGAAAATTAGCTACGCTGACA 59.067 43.478 0.00 0.00 40.10 3.58
752 753 3.242446 GCCTGAAAATTAGCTACGCTGAC 60.242 47.826 0.00 0.00 40.10 3.51
753 754 2.936498 GCCTGAAAATTAGCTACGCTGA 59.064 45.455 0.00 0.00 40.10 4.26
754 755 2.939103 AGCCTGAAAATTAGCTACGCTG 59.061 45.455 0.00 0.00 40.10 5.18
755 756 2.939103 CAGCCTGAAAATTAGCTACGCT 59.061 45.455 0.00 0.00 43.41 5.07
756 757 2.032178 CCAGCCTGAAAATTAGCTACGC 59.968 50.000 0.00 0.00 33.33 4.42
757 758 3.270877 ACCAGCCTGAAAATTAGCTACG 58.729 45.455 0.00 0.00 33.33 3.51
758 759 5.644977 AAACCAGCCTGAAAATTAGCTAC 57.355 39.130 0.00 0.00 33.33 3.58
759 760 7.768807 TTAAAACCAGCCTGAAAATTAGCTA 57.231 32.000 0.00 0.00 33.33 3.32
760 761 6.664428 TTAAAACCAGCCTGAAAATTAGCT 57.336 33.333 0.00 0.00 35.52 3.32
761 762 9.599866 AATATTAAAACCAGCCTGAAAATTAGC 57.400 29.630 0.00 0.00 0.00 3.09
764 765 9.791801 ACAAATATTAAAACCAGCCTGAAAATT 57.208 25.926 0.00 0.00 0.00 1.82
765 766 9.218440 CACAAATATTAAAACCAGCCTGAAAAT 57.782 29.630 0.00 0.00 0.00 1.82
766 767 7.172361 GCACAAATATTAAAACCAGCCTGAAAA 59.828 33.333 0.00 0.00 0.00 2.29
767 768 6.648725 GCACAAATATTAAAACCAGCCTGAAA 59.351 34.615 0.00 0.00 0.00 2.69
768 769 6.014669 AGCACAAATATTAAAACCAGCCTGAA 60.015 34.615 0.00 0.00 0.00 3.02
769 770 5.480073 AGCACAAATATTAAAACCAGCCTGA 59.520 36.000 0.00 0.00 0.00 3.86
770 771 5.577945 CAGCACAAATATTAAAACCAGCCTG 59.422 40.000 0.00 0.00 0.00 4.85
771 772 5.480073 TCAGCACAAATATTAAAACCAGCCT 59.520 36.000 0.00 0.00 0.00 4.58
772 773 5.719173 TCAGCACAAATATTAAAACCAGCC 58.281 37.500 0.00 0.00 0.00 4.85
773 774 7.384932 ACTTTCAGCACAAATATTAAAACCAGC 59.615 33.333 0.00 0.00 0.00 4.85
774 775 8.816640 ACTTTCAGCACAAATATTAAAACCAG 57.183 30.769 0.00 0.00 0.00 4.00
775 776 7.870445 GGACTTTCAGCACAAATATTAAAACCA 59.130 33.333 0.00 0.00 0.00 3.67
776 777 8.088365 AGGACTTTCAGCACAAATATTAAAACC 58.912 33.333 0.00 0.00 0.00 3.27
779 780 9.515226 AGTAGGACTTTCAGCACAAATATTAAA 57.485 29.630 0.00 0.00 0.00 1.52
780 781 8.946085 CAGTAGGACTTTCAGCACAAATATTAA 58.054 33.333 0.00 0.00 0.00 1.40
781 782 7.065803 GCAGTAGGACTTTCAGCACAAATATTA 59.934 37.037 0.00 0.00 0.00 0.98
782 783 6.127897 GCAGTAGGACTTTCAGCACAAATATT 60.128 38.462 0.00 0.00 0.00 1.28
783 784 5.355350 GCAGTAGGACTTTCAGCACAAATAT 59.645 40.000 0.00 0.00 0.00 1.28
784 785 4.695455 GCAGTAGGACTTTCAGCACAAATA 59.305 41.667 0.00 0.00 0.00 1.40
785 786 3.503748 GCAGTAGGACTTTCAGCACAAAT 59.496 43.478 0.00 0.00 0.00 2.32
786 787 2.878406 GCAGTAGGACTTTCAGCACAAA 59.122 45.455 0.00 0.00 0.00 2.83
787 788 2.104792 AGCAGTAGGACTTTCAGCACAA 59.895 45.455 0.00 0.00 0.00 3.33
788 789 1.694150 AGCAGTAGGACTTTCAGCACA 59.306 47.619 0.00 0.00 0.00 4.57
789 790 2.464157 AGCAGTAGGACTTTCAGCAC 57.536 50.000 0.00 0.00 0.00 4.40
790 791 4.956700 AGTATAGCAGTAGGACTTTCAGCA 59.043 41.667 0.00 0.00 0.00 4.41
804 805 3.607310 CGGACGTAGCTGAAGTATAGCAG 60.607 52.174 0.00 0.00 43.53 4.24
833 834 1.074752 GCAGCTACTTGACTCACAGC 58.925 55.000 0.00 0.00 0.00 4.40
835 836 1.001293 CCAGCAGCTACTTGACTCACA 59.999 52.381 0.00 0.00 0.00 3.58
836 837 1.674221 CCCAGCAGCTACTTGACTCAC 60.674 57.143 0.00 0.00 0.00 3.51
853 854 0.537653 TTGTCACAGACGAACACCCA 59.462 50.000 0.00 0.00 34.95 4.51
856 857 1.859080 GTCCTTGTCACAGACGAACAC 59.141 52.381 0.00 0.00 34.95 3.32
861 862 1.202533 ACCTTGTCCTTGTCACAGACG 60.203 52.381 0.00 0.00 34.95 4.18
865 867 6.182507 AGTAATTACCTTGTCCTTGTCACA 57.817 37.500 12.05 0.00 0.00 3.58
869 871 8.890410 TCTAGTAGTAATTACCTTGTCCTTGT 57.110 34.615 12.05 0.00 32.37 3.16
885 887 4.753610 CGAATCCGTGTCCATCTAGTAGTA 59.246 45.833 0.00 0.00 0.00 1.82
888 890 3.812262 TCGAATCCGTGTCCATCTAGTA 58.188 45.455 0.00 0.00 37.05 1.82
889 891 2.651455 TCGAATCCGTGTCCATCTAGT 58.349 47.619 0.00 0.00 37.05 2.57
890 892 3.924918 ATCGAATCCGTGTCCATCTAG 57.075 47.619 0.00 0.00 37.05 2.43
891 893 5.977489 ATAATCGAATCCGTGTCCATCTA 57.023 39.130 0.00 0.00 37.05 1.98
892 894 4.873746 ATAATCGAATCCGTGTCCATCT 57.126 40.909 0.00 0.00 37.05 2.90
896 898 6.645415 AGAAACATATAATCGAATCCGTGTCC 59.355 38.462 0.00 0.00 37.05 4.02
932 934 5.873179 TTGATTCGATCAAACCCAACTAC 57.127 39.130 7.53 0.00 45.57 2.73
942 944 7.425606 TCGATCTATGTCTTTGATTCGATCAA 58.574 34.615 6.28 6.28 46.77 2.57
969 971 8.411683 GCAGCTAACTAGTAGTAATTACCTTGA 58.588 37.037 12.05 0.00 32.37 3.02
970 972 8.414778 AGCAGCTAACTAGTAGTAATTACCTTG 58.585 37.037 12.05 6.84 32.37 3.61
971 973 8.536340 AGCAGCTAACTAGTAGTAATTACCTT 57.464 34.615 12.05 1.18 32.37 3.50
972 974 7.231115 GGAGCAGCTAACTAGTAGTAATTACCT 59.769 40.741 12.05 5.88 32.37 3.08
973 975 7.014038 TGGAGCAGCTAACTAGTAGTAATTACC 59.986 40.741 12.05 0.00 32.37 2.85
974 976 7.938715 TGGAGCAGCTAACTAGTAGTAATTAC 58.061 38.462 7.57 7.57 31.78 1.89
975 977 8.529424 TTGGAGCAGCTAACTAGTAGTAATTA 57.471 34.615 2.50 0.00 31.78 1.40
976 978 7.419711 TTGGAGCAGCTAACTAGTAGTAATT 57.580 36.000 2.50 0.00 31.78 1.40
977 979 7.437748 CATTGGAGCAGCTAACTAGTAGTAAT 58.562 38.462 2.50 0.00 31.78 1.89
979 981 5.302059 CCATTGGAGCAGCTAACTAGTAGTA 59.698 44.000 2.50 0.00 31.78 1.82
980 982 4.100189 CCATTGGAGCAGCTAACTAGTAGT 59.900 45.833 0.00 0.00 31.78 2.73
981 983 4.626042 CCATTGGAGCAGCTAACTAGTAG 58.374 47.826 0.00 0.00 0.00 2.57
982 984 3.181465 GCCATTGGAGCAGCTAACTAGTA 60.181 47.826 6.95 0.00 0.00 1.82
1024 1054 3.857010 GCGTCCTCCAATTCCAAAAACTG 60.857 47.826 0.00 0.00 0.00 3.16
1048 1078 4.832248 TCCACAATCTTCATGTACCTCAC 58.168 43.478 0.00 0.00 0.00 3.51
1065 1095 2.668632 GGATGGCGGTTCTCCACA 59.331 61.111 0.00 0.00 36.26 4.17
1077 1107 2.028190 CTGTAGCTCGCCGGATGG 59.972 66.667 5.05 0.00 38.77 3.51
1098 1128 0.744414 CAACCATGACGCCGAGGAAT 60.744 55.000 0.00 0.00 0.00 3.01
1105 1135 3.006940 TCTTGTAATCAACCATGACGCC 58.993 45.455 0.00 0.00 38.69 5.68
1139 1173 8.023706 CGTTGATCGACATGGATATATATAGGG 58.976 40.741 13.58 0.00 42.86 3.53
1147 1181 9.653287 AATTTATACGTTGATCGACATGGATAT 57.347 29.630 13.58 5.34 42.86 1.63
1183 1217 0.174845 TGTTGGTCGGTCGATCCATC 59.825 55.000 12.68 12.32 35.57 3.51
1273 1315 2.417719 GTTGAAGCTGACGATGAGGTT 58.582 47.619 0.00 0.00 33.89 3.50
1285 1327 1.518903 GGCAAGAAGGCGTTGAAGCT 61.519 55.000 0.00 0.00 37.29 3.74
1401 1443 1.226888 GCGGAGAAACTCGCGGTAT 60.227 57.895 6.13 0.00 42.48 2.73
1475 1517 6.064060 CCACCACACCATGAATGAACTATAT 58.936 40.000 0.00 0.00 0.00 0.86
1486 1528 4.098654 CACTTTTTAACCACCACACCATGA 59.901 41.667 0.00 0.00 0.00 3.07
1487 1529 4.367450 CACTTTTTAACCACCACACCATG 58.633 43.478 0.00 0.00 0.00 3.66
1488 1530 3.386402 CCACTTTTTAACCACCACACCAT 59.614 43.478 0.00 0.00 0.00 3.55
1538 1587 2.429250 TGAATCCAAGCCATGCATCAAG 59.571 45.455 0.00 0.00 0.00 3.02
1541 1590 2.288825 CCATGAATCCAAGCCATGCATC 60.289 50.000 0.00 0.00 37.07 3.91
1553 1602 1.526917 CCGACCCTGCCATGAATCC 60.527 63.158 0.00 0.00 0.00 3.01
1554 1603 2.189499 GCCGACCCTGCCATGAATC 61.189 63.158 0.00 0.00 0.00 2.52
1555 1604 2.124151 GCCGACCCTGCCATGAAT 60.124 61.111 0.00 0.00 0.00 2.57
1556 1605 2.891941 GATGCCGACCCTGCCATGAA 62.892 60.000 0.00 0.00 0.00 2.57
1557 1606 3.405093 GATGCCGACCCTGCCATGA 62.405 63.158 0.00 0.00 0.00 3.07
1620 1675 3.371097 GAAGCCGGCGATGAGGTCA 62.371 63.158 23.20 0.00 0.00 4.02
1675 1730 3.550431 CTCATCCACCCCGCCGAT 61.550 66.667 0.00 0.00 0.00 4.18
1801 1862 5.968886 TATATACGCTCGCTCCACGTTGC 62.969 52.174 0.00 0.00 44.19 4.17
1808 1869 6.462073 TTGAAAAATATATACGCTCGCTCC 57.538 37.500 0.00 0.00 0.00 4.70
2014 2076 4.501071 ACAAAGGTAGTAGCATGTTACGG 58.499 43.478 13.26 2.80 0.00 4.02
2016 2078 6.164176 ACAGACAAAGGTAGTAGCATGTTAC 58.836 40.000 11.45 11.45 0.00 2.50
2073 2135 7.972832 ATGTAAGATCGTTTGACCACTAAAA 57.027 32.000 0.00 0.00 0.00 1.52
2107 2170 9.694520 CATCGTTTCACATTAGAAAATACTCTG 57.305 33.333 0.00 0.00 39.05 3.35
2124 2189 4.301505 GCAGGAGGCATCGTTTCA 57.698 55.556 0.00 0.00 43.97 2.69
2269 2339 6.767524 TGACTTTTTCTTTAGAAAGCACCA 57.232 33.333 5.20 1.79 43.90 4.17
2290 2361 2.359850 GGGTGAGCCACGCATTGA 60.360 61.111 14.57 0.00 44.84 2.57
2330 2401 2.967362 TGAATACGACCCACATGTCAC 58.033 47.619 0.00 0.00 34.88 3.67
2411 2483 5.584649 TGCAGTAACATAACTTGTCTATGCC 59.415 40.000 0.00 0.00 37.68 4.40
2438 2510 7.010091 GCTAAAACTTGCAAAATACGGCATTAT 59.990 33.333 0.00 0.00 40.17 1.28
2440 2512 5.120053 GCTAAAACTTGCAAAATACGGCATT 59.880 36.000 0.00 0.00 40.17 3.56
2441 2513 4.625311 GCTAAAACTTGCAAAATACGGCAT 59.375 37.500 0.00 0.00 40.17 4.40
2442 2514 3.984633 GCTAAAACTTGCAAAATACGGCA 59.015 39.130 0.00 0.00 38.46 5.69
2443 2515 3.984633 TGCTAAAACTTGCAAAATACGGC 59.015 39.130 0.00 2.52 36.15 5.68
2444 2516 5.219633 AGTGCTAAAACTTGCAAAATACGG 58.780 37.500 0.00 0.00 41.10 4.02
2473 2545 9.911788 ATAGAACCTGTATCTGATGTTCAATTT 57.088 29.630 16.26 3.73 38.17 1.82
2476 2548 7.981789 GTCATAGAACCTGTATCTGATGTTCAA 59.018 37.037 16.26 2.37 38.17 2.69
2477 2549 7.343057 AGTCATAGAACCTGTATCTGATGTTCA 59.657 37.037 16.26 6.60 38.17 3.18
2478 2550 7.651304 CAGTCATAGAACCTGTATCTGATGTTC 59.349 40.741 9.39 9.39 36.45 3.18
2479 2551 7.495901 CAGTCATAGAACCTGTATCTGATGTT 58.504 38.462 0.00 0.00 0.00 2.71
2480 2552 6.462207 GCAGTCATAGAACCTGTATCTGATGT 60.462 42.308 0.00 0.00 0.00 3.06
2481 2553 5.925397 GCAGTCATAGAACCTGTATCTGATG 59.075 44.000 0.00 0.00 0.00 3.07
2482 2554 5.011533 GGCAGTCATAGAACCTGTATCTGAT 59.988 44.000 0.00 0.00 0.00 2.90
2483 2555 4.342378 GGCAGTCATAGAACCTGTATCTGA 59.658 45.833 0.00 0.00 0.00 3.27
2484 2556 4.100035 TGGCAGTCATAGAACCTGTATCTG 59.900 45.833 0.00 0.00 0.00 2.90
2489 2561 2.027745 CAGTGGCAGTCATAGAACCTGT 60.028 50.000 0.00 0.00 0.00 4.00
2492 2564 3.550437 ATCAGTGGCAGTCATAGAACC 57.450 47.619 0.00 0.00 0.00 3.62
2525 2597 5.172934 ACGGCTTCGAAACTAATGAATACA 58.827 37.500 0.00 0.00 37.63 2.29
2554 2626 9.295825 AGAAATATATTTGTGTTGTGTCCTTCA 57.704 29.630 15.39 0.00 0.00 3.02
2672 2777 3.740128 ATCGCATGTGGAGGGTCGC 62.740 63.158 6.39 0.00 0.00 5.19
2742 2847 0.552848 TTCCATGGGATTGAGGGAGC 59.447 55.000 13.02 0.00 0.00 4.70


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.