Multiple sequence alignment - TraesCS3D01G002500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G002500 chr3D 100.000 8205 0 0 1 8205 1146797 1138593 0.000000e+00 15152.0
1 TraesCS3D01G002500 chr3D 82.895 228 18 11 7467 7674 1122743 1122969 1.410000e-42 185.0
2 TraesCS3D01G002500 chr3D 94.872 78 3 1 7700 7776 612690846 612690923 4.020000e-23 121.0
3 TraesCS3D01G002500 chr3D 89.362 94 8 2 1349 1441 607875576 607875668 5.200000e-22 117.0
4 TraesCS3D01G002500 chr3D 85.714 112 11 4 1334 1441 341550664 341550554 6.730000e-21 113.0
5 TraesCS3D01G002500 chr3D 95.349 43 0 2 8143 8183 523783518 523783560 5.310000e-07 67.6
6 TraesCS3D01G002500 chr3D 87.500 56 6 1 3465 3520 535407665 535407719 6.870000e-06 63.9
7 TraesCS3D01G002500 chrUn 90.466 3346 280 22 3889 7210 34001657 34004987 0.000000e+00 4375.0
8 TraesCS3D01G002500 chrUn 89.117 2968 285 25 4347 7287 314575339 314578295 0.000000e+00 3657.0
9 TraesCS3D01G002500 chrUn 85.473 3490 444 35 3832 7287 34271127 34267667 0.000000e+00 3578.0
10 TraesCS3D01G002500 chrUn 88.675 2755 273 21 3881 6608 34458673 34455931 0.000000e+00 3323.0
11 TraesCS3D01G002500 chrUn 92.565 1856 121 9 5450 7290 308123162 308121309 0.000000e+00 2647.0
12 TraesCS3D01G002500 chrUn 84.202 2437 331 28 4877 7287 272978884 272976476 0.000000e+00 2318.0
13 TraesCS3D01G002500 chrUn 84.202 2437 331 28 4877 7287 292019345 292016937 0.000000e+00 2318.0
14 TraesCS3D01G002500 chrUn 87.090 1526 167 17 3892 5401 296986165 296984654 0.000000e+00 1700.0
15 TraesCS3D01G002500 chrUn 95.267 993 20 3 506 1497 246984683 246985649 0.000000e+00 1548.0
16 TraesCS3D01G002500 chrUn 82.883 1630 238 28 3889 5492 34435205 34433591 0.000000e+00 1426.0
17 TraesCS3D01G002500 chrUn 82.883 1630 238 28 3889 5492 35978080 35976466 0.000000e+00 1426.0
18 TraesCS3D01G002500 chrUn 88.374 1144 120 8 6155 7287 34277258 34276117 0.000000e+00 1363.0
19 TraesCS3D01G002500 chrUn 86.207 841 73 15 6608 7407 34452480 34451642 0.000000e+00 870.0
20 TraesCS3D01G002500 chrUn 92.578 512 20 2 1 504 246984131 246984632 0.000000e+00 719.0
21 TraesCS3D01G002500 chrUn 92.578 512 20 2 1 504 375954201 375954702 0.000000e+00 719.0
22 TraesCS3D01G002500 chrUn 87.652 494 39 8 2369 2857 246985641 246986117 9.300000e-154 555.0
23 TraesCS3D01G002500 chrUn 89.524 420 25 9 6878 7287 358006290 358006700 1.580000e-141 514.0
24 TraesCS3D01G002500 chrUn 88.931 262 25 3 7414 7672 34275898 34275638 3.690000e-83 320.0
25 TraesCS3D01G002500 chrUn 88.235 238 13 8 7448 7672 272976227 272975992 3.770000e-68 270.0
26 TraesCS3D01G002500 chrUn 88.235 238 13 8 7448 7672 292016688 292016453 3.770000e-68 270.0
27 TraesCS3D01G002500 chrUn 90.541 148 11 2 3202 3349 246986113 246986257 8.400000e-45 193.0
28 TraesCS3D01G002500 chrUn 85.632 174 12 8 7976 8147 272974836 272974674 3.940000e-38 171.0
29 TraesCS3D01G002500 chrUn 85.632 174 12 8 7976 8147 292015297 292015135 3.940000e-38 171.0
30 TraesCS3D01G002500 chrUn 92.222 90 4 3 7588 7674 34214145 34214056 3.110000e-24 124.0
31 TraesCS3D01G002500 chrUn 92.135 89 5 1 7586 7672 34236572 34236660 3.110000e-24 124.0
32 TraesCS3D01G002500 chrUn 89.796 98 6 4 1348 1443 76787435 76787340 1.120000e-23 122.0
33 TraesCS3D01G002500 chrUn 94.118 51 3 0 7295 7345 34276085 34276035 2.460000e-10 78.7
34 TraesCS3D01G002500 chrUn 91.379 58 3 2 7610 7665 246206084 246206027 2.460000e-10 78.7
35 TraesCS3D01G002500 chrUn 94.118 51 3 0 7295 7345 308121277 308121227 2.460000e-10 78.7
36 TraesCS3D01G002500 chrUn 94.118 51 3 0 7295 7345 314578330 314578380 2.460000e-10 78.7
37 TraesCS3D01G002500 chr3A 88.799 3473 301 31 3848 7290 7999614 8003028 0.000000e+00 4178.0
38 TraesCS3D01G002500 chr3A 87.178 3494 379 31 3828 7290 8036212 8039667 0.000000e+00 3906.0
39 TraesCS3D01G002500 chr3A 87.794 1827 171 24 5488 7292 8059857 8061653 0.000000e+00 2091.0
40 TraesCS3D01G002500 chr3A 87.739 1827 172 26 5488 7292 8062579 8064375 0.000000e+00 2085.0
41 TraesCS3D01G002500 chr3A 87.739 1827 169 28 5488 7290 8046854 8048649 0.000000e+00 2082.0
42 TraesCS3D01G002500 chr3A 87.739 1827 169 28 5488 7290 8065301 8067096 0.000000e+00 2082.0
43 TraesCS3D01G002500 chr3A 87.466 1827 177 23 5488 7292 8057124 8058920 0.000000e+00 2058.0
44 TraesCS3D01G002500 chr3A 86.992 1822 185 23 5488 7287 8054389 8056180 0.000000e+00 2004.0
45 TraesCS3D01G002500 chr3A 86.553 1465 162 15 3852 5304 8144368 8145809 0.000000e+00 1581.0
46 TraesCS3D01G002500 chr3A 97.664 856 17 2 7352 8205 8146090 8146944 0.000000e+00 1467.0
47 TraesCS3D01G002500 chr3A 91.083 785 58 7 578 1350 7994694 7995478 0.000000e+00 1051.0
48 TraesCS3D01G002500 chr3A 88.438 493 40 5 2369 2857 7995533 7996012 5.520000e-161 579.0
49 TraesCS3D01G002500 chr3A 88.818 313 20 5 2051 2351 742893408 742893099 3.620000e-98 370.0
50 TraesCS3D01G002500 chr3A 87.868 272 6 7 7123 7367 8145807 8146078 2.240000e-75 294.0
51 TraesCS3D01G002500 chr3A 88.500 200 15 3 7481 7672 8082116 8082315 1.380000e-57 235.0
52 TraesCS3D01G002500 chr3A 90.854 164 15 0 3519 3682 728118488 728118651 3.860000e-53 220.0
53 TraesCS3D01G002500 chr3A 92.157 153 12 0 3203 3355 7996009 7996161 4.990000e-52 217.0
54 TraesCS3D01G002500 chr3A 86.916 107 9 4 7976 8079 8120368 8120472 1.870000e-21 115.0
55 TraesCS3D01G002500 chr3A 95.652 69 2 1 7700 7768 12447918 12447851 8.710000e-20 110.0
56 TraesCS3D01G002500 chr3A 88.636 88 10 0 7862 7949 8083090 8083177 3.130000e-19 108.0
57 TraesCS3D01G002500 chr3A 94.231 52 2 1 7295 7345 8003059 8003110 2.460000e-10 78.7
58 TraesCS3D01G002500 chr3A 94.231 52 2 1 7295 7345 8058950 8059001 2.460000e-10 78.7
59 TraesCS3D01G002500 chr3A 97.561 41 1 0 8143 8183 658702360 658702400 4.110000e-08 71.3
60 TraesCS3D01G002500 chr1B 82.087 1859 270 32 4913 6759 683516205 683514398 0.000000e+00 1530.0
61 TraesCS3D01G002500 chr1B 87.539 321 20 8 1974 2281 287826143 287826456 3.640000e-93 353.0
62 TraesCS3D01G002500 chr1B 92.308 52 2 2 3473 3523 4051126 4051076 1.140000e-08 73.1
63 TraesCS3D01G002500 chr2B 91.078 863 41 7 1497 2351 705670944 705670110 0.000000e+00 1134.0
64 TraesCS3D01G002500 chr2B 94.783 345 18 0 2858 3202 173474452 173474108 9.370000e-149 538.0
65 TraesCS3D01G002500 chr2B 90.769 130 11 1 2220 2349 26512678 26512550 1.090000e-38 172.0
66 TraesCS3D01G002500 chr2B 90.769 130 11 1 2220 2349 26524259 26524131 1.090000e-38 172.0
67 TraesCS3D01G002500 chr2B 93.617 47 3 0 3474 3520 742453559 742453513 4.110000e-08 71.3
68 TraesCS3D01G002500 chr6D 84.058 897 66 29 1503 2351 453731985 453732852 0.000000e+00 793.0
69 TraesCS3D01G002500 chr6D 83.945 872 68 26 1506 2351 453653771 453652946 0.000000e+00 769.0
70 TraesCS3D01G002500 chr6D 79.713 488 65 16 1495 1973 7253009 7253471 1.030000e-83 322.0
71 TraesCS3D01G002500 chr6D 90.323 93 8 1 1343 1435 411210168 411210077 4.020000e-23 121.0
72 TraesCS3D01G002500 chr6D 92.405 79 4 2 7700 7777 161861 161784 2.420000e-20 111.0
73 TraesCS3D01G002500 chr4A 83.038 902 69 27 1514 2351 613684234 613683353 0.000000e+00 741.0
74 TraesCS3D01G002500 chr4A 96.512 344 12 0 2858 3201 744006164 744006507 3.320000e-158 569.0
75 TraesCS3D01G002500 chr4A 92.593 162 12 0 3519 3680 47406268 47406429 4.950000e-57 233.0
76 TraesCS3D01G002500 chr7B 91.250 480 28 4 1498 1976 41060603 41061069 6.940000e-180 641.0
77 TraesCS3D01G002500 chr7B 89.462 465 26 9 1898 2351 683756138 683755686 4.300000e-157 566.0
78 TraesCS3D01G002500 chr7B 88.498 313 23 8 1974 2281 41060994 41061298 4.680000e-97 366.0
79 TraesCS3D01G002500 chr7B 93.151 73 4 1 7700 7772 463474217 463474288 1.130000e-18 106.0
80 TraesCS3D01G002500 chr7B 94.286 70 3 1 7708 7776 622618144 622618075 1.130000e-18 106.0
81 TraesCS3D01G002500 chr7A 90.625 480 31 4 1498 1976 668785944 668785478 6.990000e-175 625.0
82 TraesCS3D01G002500 chr7A 87.107 318 21 10 1977 2281 668785550 668785240 7.890000e-90 342.0
83 TraesCS3D01G002500 chr7A 92.500 160 12 0 3519 3678 329488438 329488279 6.410000e-56 230.0
84 TraesCS3D01G002500 chr7A 90.588 170 14 2 3519 3686 232743963 232743794 2.980000e-54 224.0
85 TraesCS3D01G002500 chr7A 95.238 84 4 0 2268 2351 668785219 668785136 5.170000e-27 134.0
86 TraesCS3D01G002500 chr7D 90.229 481 31 6 1498 1976 625346339 625345873 1.510000e-171 614.0
87 TraesCS3D01G002500 chr7D 87.107 318 21 7 1977 2281 625345945 625345635 7.890000e-90 342.0
88 TraesCS3D01G002500 chr7D 94.340 159 9 0 3519 3677 597671656 597671814 2.290000e-60 244.0
89 TraesCS3D01G002500 chr7D 96.429 84 3 0 2268 2351 625345615 625345532 1.110000e-28 139.0
90 TraesCS3D01G002500 chr7D 94.000 50 2 1 3475 3523 3095011 3095060 3.180000e-09 75.0
91 TraesCS3D01G002500 chr7D 94.000 50 2 1 3475 3523 3168741 3168692 3.180000e-09 75.0
92 TraesCS3D01G002500 chr1A 90.583 446 32 3 1498 1941 16309834 16309397 4.270000e-162 582.0
93 TraesCS3D01G002500 chr1A 95.058 344 16 1 2858 3201 479829877 479830219 2.610000e-149 540.0
94 TraesCS3D01G002500 chr1A 82.917 480 50 16 1898 2350 565122686 565122212 3.570000e-108 403.0
95 TraesCS3D01G002500 chr1A 86.792 318 22 11 1977 2281 16309439 16309129 3.670000e-88 337.0
96 TraesCS3D01G002500 chr1A 96.429 84 3 0 2268 2351 16309108 16309025 1.110000e-28 139.0
97 TraesCS3D01G002500 chr2A 95.665 346 15 0 2858 3203 530353219 530352874 2.590000e-154 556.0
98 TraesCS3D01G002500 chr2A 95.376 346 16 0 2857 3202 401204611 401204956 1.200000e-152 551.0
99 TraesCS3D01G002500 chr2A 95.376 346 16 0 2857 3202 403172262 403172607 1.200000e-152 551.0
100 TraesCS3D01G002500 chr2A 91.209 91 7 1 1345 1435 712971381 712971470 1.120000e-23 122.0
101 TraesCS3D01G002500 chr2A 93.750 48 3 0 3473 3520 585818879 585818926 1.140000e-08 73.1
102 TraesCS3D01G002500 chr4B 95.640 344 15 0 2858 3201 492208318 492208661 3.350000e-153 553.0
103 TraesCS3D01G002500 chr4B 94.633 354 19 0 2857 3210 206806368 206806015 4.330000e-152 549.0
104 TraesCS3D01G002500 chr3B 95.652 345 13 1 2858 3202 801196770 801197112 3.350000e-153 553.0
105 TraesCS3D01G002500 chr3B 95.122 41 2 0 8143 8183 690877557 690877597 1.910000e-06 65.8
106 TraesCS3D01G002500 chr6B 92.373 354 20 3 1624 1976 101698351 101698698 1.590000e-136 497.0
107 TraesCS3D01G002500 chr6B 87.227 321 21 8 1974 2281 101698623 101698936 1.690000e-91 348.0
108 TraesCS3D01G002500 chr6B 95.238 84 4 0 2268 2351 101698957 101699040 5.170000e-27 134.0
109 TraesCS3D01G002500 chr6B 93.590 78 5 0 1664 1741 80040319 80040242 5.200000e-22 117.0
110 TraesCS3D01G002500 chr2D 92.442 172 11 2 3506 3677 357894925 357895094 2.290000e-60 244.0
111 TraesCS3D01G002500 chr2D 88.660 97 10 1 1340 1436 15682993 15682898 5.200000e-22 117.0
112 TraesCS3D01G002500 chr2D 97.619 42 1 0 3479 3520 638884450 638884409 1.140000e-08 73.1
113 TraesCS3D01G002500 chr5A 93.082 159 11 0 3519 3677 597832188 597832030 4.950000e-57 233.0
114 TraesCS3D01G002500 chr5A 90.116 172 15 2 3519 3688 618310178 618310007 1.070000e-53 222.0
115 TraesCS3D01G002500 chr5A 87.931 58 4 3 3465 3520 672373930 672373986 1.910000e-06 65.8
116 TraesCS3D01G002500 chr5D 90.698 172 14 2 3506 3677 42063454 42063623 2.300000e-55 228.0
117 TraesCS3D01G002500 chr1D 91.111 90 7 1 1349 1438 337065189 337065277 4.020000e-23 121.0
118 TraesCS3D01G002500 chr1D 89.474 95 6 4 1346 1438 80001399 80001491 5.200000e-22 117.0
119 TraesCS3D01G002500 chr5B 94.521 73 3 1 7700 7772 535045952 535046023 2.420000e-20 111.0
120 TraesCS3D01G002500 chr5B 96.970 66 2 0 7700 7765 686204570 686204505 2.420000e-20 111.0
121 TraesCS3D01G002500 chr4D 94.444 72 4 0 7700 7771 29396888 29396817 2.420000e-20 111.0
122 TraesCS3D01G002500 chr4D 85.849 106 14 1 1329 1434 236940107 236940211 2.420000e-20 111.0
123 TraesCS3D01G002500 chr6A 97.778 45 1 0 3476 3520 24080642 24080686 2.460000e-10 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G002500 chr3D 1138593 1146797 8204 True 15152.000000 15152 100.000000 1 8205 1 chr3D.!!$R1 8204
1 TraesCS3D01G002500 chrUn 34001657 34004987 3330 False 4375.000000 4375 90.466000 3889 7210 1 chrUn.!!$F1 3321
2 TraesCS3D01G002500 chrUn 34267667 34271127 3460 True 3578.000000 3578 85.473000 3832 7287 1 chrUn.!!$R2 3455
3 TraesCS3D01G002500 chrUn 34451642 34458673 7031 True 2096.500000 3323 87.441000 3881 7407 2 chrUn.!!$R9 3526
4 TraesCS3D01G002500 chrUn 314575339 314578380 3041 False 1867.850000 3657 91.617500 4347 7345 2 chrUn.!!$F6 2998
5 TraesCS3D01G002500 chrUn 296984654 296986165 1511 True 1700.000000 1700 87.090000 3892 5401 1 chrUn.!!$R7 1509
6 TraesCS3D01G002500 chrUn 34433591 34435205 1614 True 1426.000000 1426 82.883000 3889 5492 1 chrUn.!!$R3 1603
7 TraesCS3D01G002500 chrUn 35976466 35978080 1614 True 1426.000000 1426 82.883000 3889 5492 1 chrUn.!!$R4 1603
8 TraesCS3D01G002500 chrUn 308121227 308123162 1935 True 1362.850000 2647 93.341500 5450 7345 2 chrUn.!!$R12 1895
9 TraesCS3D01G002500 chrUn 272974674 272978884 4210 True 919.666667 2318 86.023000 4877 8147 3 chrUn.!!$R10 3270
10 TraesCS3D01G002500 chrUn 292015135 292019345 4210 True 919.666667 2318 86.023000 4877 8147 3 chrUn.!!$R11 3270
11 TraesCS3D01G002500 chrUn 246984131 246986257 2126 False 753.750000 1548 91.509500 1 3349 4 chrUn.!!$F5 3348
12 TraesCS3D01G002500 chrUn 375954201 375954702 501 False 719.000000 719 92.578000 1 504 1 chrUn.!!$F4 503
13 TraesCS3D01G002500 chrUn 34275638 34277258 1620 True 587.233333 1363 90.474333 6155 7672 3 chrUn.!!$R8 1517
14 TraesCS3D01G002500 chr3A 8036212 8039667 3455 False 3906.000000 3906 87.178000 3828 7290 1 chr3A.!!$F1 3462
15 TraesCS3D01G002500 chr3A 8046854 8048649 1795 False 2082.000000 2082 87.739000 5488 7290 1 chr3A.!!$F2 1802
16 TraesCS3D01G002500 chr3A 8054389 8067096 12707 False 1733.116667 2091 88.660167 5488 7345 6 chr3A.!!$F7 1857
17 TraesCS3D01G002500 chr3A 7994694 8003110 8416 False 1220.740000 4178 90.941600 578 7345 5 chr3A.!!$F6 6767
18 TraesCS3D01G002500 chr3A 8144368 8146944 2576 False 1114.000000 1581 90.695000 3852 8205 3 chr3A.!!$F9 4353
19 TraesCS3D01G002500 chr1B 683514398 683516205 1807 True 1530.000000 1530 82.087000 4913 6759 1 chr1B.!!$R2 1846
20 TraesCS3D01G002500 chr2B 705670110 705670944 834 True 1134.000000 1134 91.078000 1497 2351 1 chr2B.!!$R4 854
21 TraesCS3D01G002500 chr6D 453731985 453732852 867 False 793.000000 793 84.058000 1503 2351 1 chr6D.!!$F2 848
22 TraesCS3D01G002500 chr6D 453652946 453653771 825 True 769.000000 769 83.945000 1506 2351 1 chr6D.!!$R3 845
23 TraesCS3D01G002500 chr4A 613683353 613684234 881 True 741.000000 741 83.038000 1514 2351 1 chr4A.!!$R1 837
24 TraesCS3D01G002500 chr7B 41060603 41061298 695 False 503.500000 641 89.874000 1498 2281 2 chr7B.!!$F2 783
25 TraesCS3D01G002500 chr7A 668785136 668785944 808 True 367.000000 625 90.990000 1498 2351 3 chr7A.!!$R3 853
26 TraesCS3D01G002500 chr7D 625345532 625346339 807 True 365.000000 614 91.255000 1498 2351 3 chr7D.!!$R2 853
27 TraesCS3D01G002500 chr1A 16309025 16309834 809 True 352.666667 582 91.268000 1498 2351 3 chr1A.!!$R2 853
28 TraesCS3D01G002500 chr6B 101698351 101699040 689 False 326.333333 497 91.612667 1624 2351 3 chr6B.!!$F1 727

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
336 345 0.102481 CCGACGGGTTAGACTGATGG 59.898 60.0 5.81 0.0 0.00 3.51 F
1528 1598 0.250684 TCATGGGCGAAAAGTGAGCA 60.251 50.0 0.00 0.0 0.00 4.26 F
2879 3140 0.038021 TAAGCTTCATGCACCAGCCA 59.962 50.0 0.00 0.0 45.94 4.75 F
3045 3306 0.034337 GGCCTCTACGTGGACACAAA 59.966 55.0 0.00 0.0 31.53 2.83 F
3141 3402 0.038021 TAAGCTTCATGCACCAGCCA 59.962 50.0 0.00 0.0 45.94 4.75 F
3156 3417 0.102300 AGCCAACGCAACCAAAAGTC 59.898 50.0 0.00 0.0 37.52 3.01 F
3425 6991 0.250727 CCTCTTCCCGCCAACAAAGA 60.251 55.0 0.00 0.0 0.00 2.52 F
3801 7368 0.469705 ACCACCTCATGCAAGCCAAA 60.470 50.0 0.00 0.0 0.00 3.28 F
4062 7634 0.739462 CGGCGCCACAGAGACAATAA 60.739 55.0 28.98 0.0 0.00 1.40 F
5072 8669 1.188863 CCAATCCCCCAAGAGCTTTG 58.811 55.0 0.00 0.0 0.00 2.77 F
6230 15310 0.099436 GCCTGCAGCTTATTCCAACG 59.901 55.0 8.66 0.0 38.99 4.10 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2325 2582 0.521291 GGCTCATGCAAACGCTACAA 59.479 50.000 0.00 0.00 41.91 2.41 R
2947 3208 0.030235 TGTCTTCTCCGTCACACGTG 59.970 55.000 15.48 15.48 40.58 4.49 R
3782 7349 0.469705 TTTGGCTTGCATGAGGTGGT 60.470 50.000 3.33 0.00 0.00 4.16 R
3971 7542 1.210155 GCCTTTGGTAGCTGCAACG 59.790 57.895 3.61 0.00 0.00 4.10 R
4029 7601 1.501741 CGCCGTCAACATCTTTGGG 59.498 57.895 0.00 0.00 0.00 4.12 R
4228 7816 1.682257 GCCCTCTGCACTCCTCTTT 59.318 57.895 0.00 0.00 40.77 2.52 R
4327 7915 3.141398 TCACACCTTGAGCTTTCATCAC 58.859 45.455 0.00 0.00 0.00 3.06 R
5381 8978 3.385755 GGTTAGGTAATCGCCCTTGTAGA 59.614 47.826 0.00 0.00 33.35 2.59 R
5929 14994 1.004277 GTCAGGAACACTCTCGTGCG 61.004 60.000 0.00 0.00 45.10 5.34 R
6561 15668 0.466189 AAAATCGAGCGGGCCATCAT 60.466 50.000 4.39 0.00 0.00 2.45 R
7423 25558 0.403271 AGGCAGCTGTGACAATTCCT 59.597 50.000 16.64 7.52 31.79 3.36 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 0.543749 CTCCTGTCCCTGTCCCAATC 59.456 60.000 0.00 0.00 0.00 2.67
31 32 0.178876 TCCTGTCCCTGTCCCAATCA 60.179 55.000 0.00 0.00 0.00 2.57
120 121 0.590195 CCATCGCTAGCATGCTTTCC 59.410 55.000 28.02 13.25 0.00 3.13
121 122 0.590195 CATCGCTAGCATGCTTTCCC 59.410 55.000 28.02 10.71 0.00 3.97
122 123 0.536006 ATCGCTAGCATGCTTTCCCC 60.536 55.000 28.02 8.91 0.00 4.81
123 124 1.153086 CGCTAGCATGCTTTCCCCT 60.153 57.895 28.02 1.31 0.00 4.79
124 125 1.442526 CGCTAGCATGCTTTCCCCTG 61.443 60.000 28.02 8.65 0.00 4.45
125 126 1.732417 GCTAGCATGCTTTCCCCTGC 61.732 60.000 28.02 14.33 34.85 4.85
126 127 0.106819 CTAGCATGCTTTCCCCTGCT 60.107 55.000 28.02 0.00 46.16 4.24
127 128 0.332632 TAGCATGCTTTCCCCTGCTT 59.667 50.000 28.02 0.00 42.03 3.91
128 129 0.543646 AGCATGCTTTCCCCTGCTTT 60.544 50.000 16.30 0.00 42.03 3.51
129 130 1.185315 GCATGCTTTCCCCTGCTTTA 58.815 50.000 11.37 0.00 0.00 1.85
150 151 0.741574 CCAAAGCGTGCCACCGTATA 60.742 55.000 0.00 0.00 0.00 1.47
208 209 3.397613 GAGCTCAGCCCTCGCCAAT 62.398 63.158 9.40 0.00 34.57 3.16
213 214 0.960364 TCAGCCCTCGCCAATGTTTC 60.960 55.000 0.00 0.00 34.57 2.78
224 225 6.655003 CCTCGCCAATGTTTCCTTATATATGT 59.345 38.462 0.00 0.00 0.00 2.29
263 272 3.638627 TGGTTAACAATGGTGATGCACAA 59.361 39.130 8.10 0.00 35.86 3.33
318 327 2.079925 GTGGTGCTGAGATCTTGAACC 58.920 52.381 16.03 16.03 0.00 3.62
323 332 1.914634 CTGAGATCTTGAACCGACGG 58.085 55.000 13.61 13.61 0.00 4.79
335 344 3.642901 CCGACGGGTTAGACTGATG 57.357 57.895 5.81 0.00 0.00 3.07
336 345 0.102481 CCGACGGGTTAGACTGATGG 59.898 60.000 5.81 0.00 0.00 3.51
340 349 3.430374 CGACGGGTTAGACTGATGGAATT 60.430 47.826 0.00 0.00 0.00 2.17
353 362 3.630769 TGATGGAATTTGCAGAGCAGATC 59.369 43.478 0.00 0.00 40.61 2.75
417 426 6.564709 TCTCCTCAGTTGAACATTGATTTG 57.435 37.500 0.00 0.00 0.00 2.32
433 442 3.882888 TGATTTGAGTCTTTCGGTTGCTT 59.117 39.130 0.00 0.00 0.00 3.91
437 446 2.070028 GAGTCTTTCGGTTGCTTCTCC 58.930 52.381 0.00 0.00 0.00 3.71
446 455 0.459411 GTTGCTTCTCCCTCGCTCTC 60.459 60.000 0.00 0.00 0.00 3.20
486 495 2.355716 GGAATTCATCACGTCTCCCCAA 60.356 50.000 7.93 0.00 0.00 4.12
487 496 3.545703 GAATTCATCACGTCTCCCCAAT 58.454 45.455 0.00 0.00 0.00 3.16
499 508 4.993584 CGTCTCCCCAATAGATGAAGATTG 59.006 45.833 0.00 0.00 32.68 2.67
508 566 3.548745 AGATGAAGATTGGATCGTGCA 57.451 42.857 0.00 0.00 0.00 4.57
577 635 0.252467 AAGCCTCCTACTCCTGCAGT 60.252 55.000 13.81 0.00 39.41 4.40
958 1026 8.810427 CCGGTTGAGATTGATTGATTTAATTTG 58.190 33.333 0.00 0.00 0.00 2.32
1003 1071 1.661341 AGCAGAGGAATTCGTCATGC 58.339 50.000 27.06 27.06 36.31 4.06
1019 1087 2.101415 TCATGCGTAGTCCTCTTCCATG 59.899 50.000 0.00 0.00 0.00 3.66
1043 1111 6.821665 TGGGTAATACTCTTTGTGCATCTTAC 59.178 38.462 0.00 0.00 0.00 2.34
1102 1171 3.018856 CTGTCATGGTTGTGTATGGCAT 58.981 45.455 4.88 4.88 38.15 4.40
1282 1352 8.379457 ACAAAAGTAAGTTCTAACTCCATGTC 57.621 34.615 0.00 0.00 38.57 3.06
1374 1444 6.437793 ACTTCCTCCGTCCCATAATATAAGAG 59.562 42.308 0.00 0.00 0.00 2.85
1375 1445 5.900437 TCCTCCGTCCCATAATATAAGAGT 58.100 41.667 0.00 0.00 0.00 3.24
1376 1446 5.715279 TCCTCCGTCCCATAATATAAGAGTG 59.285 44.000 0.00 0.00 0.00 3.51
1377 1447 5.480772 CCTCCGTCCCATAATATAAGAGTGT 59.519 44.000 0.00 0.00 0.00 3.55
1382 1452 8.557029 CCGTCCCATAATATAAGAGTGTTTTTC 58.443 37.037 0.00 0.00 0.00 2.29
1384 1454 8.068380 GTCCCATAATATAAGAGTGTTTTTCGC 58.932 37.037 0.00 0.00 0.00 4.70
1385 1455 7.771361 TCCCATAATATAAGAGTGTTTTTCGCA 59.229 33.333 0.00 0.00 0.00 5.10
1386 1456 7.855904 CCCATAATATAAGAGTGTTTTTCGCAC 59.144 37.037 0.00 0.00 37.13 5.34
1390 1460 8.773404 AATATAAGAGTGTTTTTCGCACTAGT 57.227 30.769 0.00 0.00 45.99 2.57
1391 1461 9.865321 AATATAAGAGTGTTTTTCGCACTAGTA 57.135 29.630 0.00 0.00 45.99 1.82
1394 1464 7.813852 AAGAGTGTTTTTCGCACTAGTATAG 57.186 36.000 0.00 0.00 45.99 1.31
1492 1562 6.753913 ATGAGGCTCTGGTTAAATAGATCA 57.246 37.500 16.72 0.00 0.00 2.92
1493 1563 5.918608 TGAGGCTCTGGTTAAATAGATCAC 58.081 41.667 16.72 0.00 0.00 3.06
1494 1564 5.425217 TGAGGCTCTGGTTAAATAGATCACA 59.575 40.000 16.72 0.00 0.00 3.58
1495 1565 6.070251 TGAGGCTCTGGTTAAATAGATCACAA 60.070 38.462 16.72 0.00 0.00 3.33
1504 1574 8.296713 TGGTTAAATAGATCACAAGCAAAGTTC 58.703 33.333 0.00 0.00 0.00 3.01
1511 1581 6.705302 AGATCACAAGCAAAGTTCTAGATCA 58.295 36.000 3.70 0.00 33.61 2.92
1512 1582 7.337167 AGATCACAAGCAAAGTTCTAGATCAT 58.663 34.615 3.70 0.00 33.61 2.45
1528 1598 0.250684 TCATGGGCGAAAAGTGAGCA 60.251 50.000 0.00 0.00 0.00 4.26
1567 1637 2.849646 GGAGGCCTCCCCGCTAAT 60.850 66.667 38.25 0.00 43.94 1.73
1568 1638 2.452937 GGAGGCCTCCCCGCTAATT 61.453 63.158 38.25 0.00 43.94 1.40
1607 1678 1.734163 AACGCTAACTGCCGCTAATT 58.266 45.000 0.00 0.00 38.78 1.40
1610 1681 0.732571 GCTAACTGCCGCTAATTGCA 59.267 50.000 0.00 0.00 43.06 4.08
1671 1743 1.750399 CAGTTTCGCTGGGATGGGG 60.750 63.158 0.00 0.00 41.42 4.96
1747 1820 0.468226 AGCACTTCCTCCACGAAACA 59.532 50.000 0.00 0.00 0.00 2.83
1960 2129 1.913317 CATCTCTGCATGACGACGAA 58.087 50.000 0.00 0.00 0.00 3.85
1998 2167 2.970324 GCAAGGCAACGACCACGA 60.970 61.111 0.00 0.00 46.39 4.35
2027 2196 3.902086 GCGACGAGGGGCCTCTAC 61.902 72.222 4.16 0.00 40.69 2.59
2028 2197 2.439701 CGACGAGGGGCCTCTACA 60.440 66.667 4.16 0.00 40.69 2.74
2029 2198 2.772691 CGACGAGGGGCCTCTACAC 61.773 68.421 4.16 0.00 40.69 2.90
2030 2199 2.754658 ACGAGGGGCCTCTACACG 60.755 66.667 4.16 8.17 40.69 4.49
2031 2200 2.439701 CGAGGGGCCTCTACACGA 60.440 66.667 4.16 0.00 40.69 4.35
2032 2201 2.772691 CGAGGGGCCTCTACACGAC 61.773 68.421 4.16 0.00 40.69 4.34
2033 2202 2.754658 AGGGGCCTCTACACGACG 60.755 66.667 0.94 0.00 0.00 5.12
2034 2203 2.753043 GGGGCCTCTACACGACGA 60.753 66.667 0.84 0.00 0.00 4.20
2035 2204 2.488820 GGGCCTCTACACGACGAC 59.511 66.667 0.84 0.00 0.00 4.34
2036 2205 2.099831 GGCCTCTACACGACGACG 59.900 66.667 5.58 5.58 45.75 5.12
2037 2206 2.099831 GCCTCTACACGACGACGG 59.900 66.667 12.58 3.35 44.46 4.79
2116 2327 2.835764 TCAGGTATAGCGGTTCAGGTTT 59.164 45.455 0.00 0.00 0.00 3.27
2271 2528 7.093377 ACCCTGCTTTTTGAGATAAATATGCAA 60.093 33.333 0.00 0.00 0.00 4.08
2325 2582 1.752683 CTATCTCCGGCTATAGCGGT 58.247 55.000 25.34 13.05 43.26 5.68
2361 2618 4.585526 CAGCCGCCCGCGATCTTA 62.586 66.667 8.23 0.00 44.76 2.10
2362 2619 3.845259 AGCCGCCCGCGATCTTAA 61.845 61.111 8.23 0.00 44.76 1.85
2363 2620 2.893404 GCCGCCCGCGATCTTAAA 60.893 61.111 8.23 0.00 42.83 1.52
2364 2621 2.466140 GCCGCCCGCGATCTTAAAA 61.466 57.895 8.23 0.00 42.83 1.52
2365 2622 1.782028 GCCGCCCGCGATCTTAAAAT 61.782 55.000 8.23 0.00 42.83 1.82
2366 2623 0.661020 CCGCCCGCGATCTTAAAATT 59.339 50.000 8.23 0.00 42.83 1.82
2367 2624 1.064952 CCGCCCGCGATCTTAAAATTT 59.935 47.619 8.23 0.00 42.83 1.82
2368 2625 2.108700 CGCCCGCGATCTTAAAATTTG 58.891 47.619 8.23 0.00 42.83 2.32
2435 2692 5.392767 TCTCTGAGCTCGTGTTTCTTAAT 57.607 39.130 9.64 0.00 0.00 1.40
2496 2753 3.193267 TCTGGAATGTAAAAGCACCATGC 59.807 43.478 0.00 0.00 45.46 4.06
2563 2820 4.336713 AGTTTCTTGCAAACTGGAGTCTTC 59.663 41.667 0.00 0.00 38.88 2.87
2564 2821 3.845781 TCTTGCAAACTGGAGTCTTCT 57.154 42.857 0.00 0.00 0.00 2.85
2565 2822 3.733337 TCTTGCAAACTGGAGTCTTCTC 58.267 45.455 0.00 0.00 39.76 2.87
2566 2823 3.134623 TCTTGCAAACTGGAGTCTTCTCA 59.865 43.478 0.00 0.00 42.05 3.27
2567 2824 2.838736 TGCAAACTGGAGTCTTCTCAC 58.161 47.619 0.00 0.00 42.05 3.51
2568 2825 2.435805 TGCAAACTGGAGTCTTCTCACT 59.564 45.455 0.00 0.00 42.05 3.41
2569 2826 3.063485 GCAAACTGGAGTCTTCTCACTC 58.937 50.000 0.00 0.00 42.05 3.51
2570 2827 3.493350 GCAAACTGGAGTCTTCTCACTCA 60.493 47.826 3.17 0.00 44.18 3.41
2571 2828 4.802248 GCAAACTGGAGTCTTCTCACTCAT 60.802 45.833 3.17 0.00 44.18 2.90
2572 2829 4.533919 AACTGGAGTCTTCTCACTCATG 57.466 45.455 3.17 0.00 44.18 3.07
2573 2830 2.830923 ACTGGAGTCTTCTCACTCATGG 59.169 50.000 3.17 0.00 44.18 3.66
2574 2831 2.830923 CTGGAGTCTTCTCACTCATGGT 59.169 50.000 3.17 0.00 44.18 3.55
2575 2832 4.019858 CTGGAGTCTTCTCACTCATGGTA 58.980 47.826 3.17 0.00 44.18 3.25
2644 2901 7.010923 GCCACAAACAGAACACAAATGATAAAA 59.989 33.333 0.00 0.00 0.00 1.52
2654 2911 8.593492 AACACAAATGATAAAAAGAAAGCTCC 57.407 30.769 0.00 0.00 0.00 4.70
2692 2949 7.284489 TGGGAGTATCTAATAATGCACCAAAAC 59.716 37.037 0.00 0.00 33.73 2.43
2697 2954 4.941263 TCTAATAATGCACCAAAACGCTCT 59.059 37.500 0.00 0.00 0.00 4.09
2716 2973 4.990426 GCTCTGGAAGATAGAAGCTTCATC 59.010 45.833 27.57 23.95 45.62 2.92
2723 2980 8.366401 TGGAAGATAGAAGCTTCATCTAATCAG 58.634 37.037 27.18 0.00 42.68 2.90
2727 2984 1.876322 AGCTTCATCTAATCAGGCGC 58.124 50.000 0.00 0.00 0.00 6.53
2743 3000 1.265568 GCGCATTGAATGTTGAGCTG 58.734 50.000 0.30 0.00 36.00 4.24
2757 3014 3.272031 GCTGCTGCTGGTTCTTCC 58.728 61.111 8.53 0.00 36.03 3.46
2758 3015 2.684843 GCTGCTGCTGGTTCTTCCG 61.685 63.158 8.53 0.00 39.52 4.30
2761 3018 0.179032 TGCTGCTGGTTCTTCCGAAA 60.179 50.000 0.00 0.00 39.52 3.46
2797 3054 3.959535 ATTCGTTGGGAAATTGCACAT 57.040 38.095 0.00 0.00 38.36 3.21
2813 3070 4.030216 TGCACATGATTAGGAGGTAGTCA 58.970 43.478 0.00 0.00 32.34 3.41
2815 3072 5.838521 TGCACATGATTAGGAGGTAGTCATA 59.161 40.000 0.00 0.00 36.26 2.15
2816 3073 6.498303 TGCACATGATTAGGAGGTAGTCATAT 59.502 38.462 0.00 0.00 36.26 1.78
2817 3074 7.038659 GCACATGATTAGGAGGTAGTCATATC 58.961 42.308 0.00 0.00 36.26 1.63
2818 3075 7.093552 GCACATGATTAGGAGGTAGTCATATCT 60.094 40.741 0.00 0.00 36.26 1.98
2820 3077 8.173412 ACATGATTAGGAGGTAGTCATATCTCA 58.827 37.037 0.00 0.00 40.43 3.27
2822 3083 8.815565 TGATTAGGAGGTAGTCATATCTCATC 57.184 38.462 0.00 0.00 40.43 2.92
2825 3086 6.073447 AGGAGGTAGTCATATCTCATCGAT 57.927 41.667 0.00 0.00 40.43 3.59
2833 3094 3.584406 TCATATCTCATCGATGCCCCTTT 59.416 43.478 20.81 4.71 33.48 3.11
2835 3096 1.500474 TCTCATCGATGCCCCTTTCT 58.500 50.000 20.81 0.00 0.00 2.52
2838 3099 3.019564 CTCATCGATGCCCCTTTCTTTT 58.980 45.455 20.81 0.00 0.00 2.27
2841 3102 5.013547 TCATCGATGCCCCTTTCTTTTAAA 58.986 37.500 20.81 0.00 0.00 1.52
2848 3109 4.141390 TGCCCCTTTCTTTTAAAATTGCCA 60.141 37.500 0.09 0.00 0.00 4.92
2853 3114 6.765512 CCCTTTCTTTTAAAATTGCCACAGAA 59.234 34.615 0.09 0.00 0.00 3.02
2854 3115 7.254761 CCCTTTCTTTTAAAATTGCCACAGAAC 60.255 37.037 0.09 0.00 0.00 3.01
2855 3116 7.279758 CCTTTCTTTTAAAATTGCCACAGAACA 59.720 33.333 0.09 0.00 0.00 3.18
2856 3117 7.769272 TTCTTTTAAAATTGCCACAGAACAG 57.231 32.000 0.09 0.00 0.00 3.16
2857 3118 6.872920 TCTTTTAAAATTGCCACAGAACAGT 58.127 32.000 0.09 0.00 0.00 3.55
2858 3119 6.756074 TCTTTTAAAATTGCCACAGAACAGTG 59.244 34.615 0.09 0.00 39.21 3.66
2859 3120 5.590530 TTAAAATTGCCACAGAACAGTGT 57.409 34.783 0.00 0.00 37.82 3.55
2860 3121 4.470334 AAAATTGCCACAGAACAGTGTT 57.530 36.364 8.61 8.61 37.82 3.32
2861 3122 5.590530 AAAATTGCCACAGAACAGTGTTA 57.409 34.783 8.88 0.00 37.82 2.41
2862 3123 5.590530 AAATTGCCACAGAACAGTGTTAA 57.409 34.783 8.88 0.00 37.82 2.01
2863 3124 4.836125 ATTGCCACAGAACAGTGTTAAG 57.164 40.909 8.88 7.05 37.82 1.85
2864 3125 1.946768 TGCCACAGAACAGTGTTAAGC 59.053 47.619 8.88 8.17 37.82 3.09
2865 3126 2.222027 GCCACAGAACAGTGTTAAGCT 58.778 47.619 8.88 0.00 37.82 3.74
2866 3127 2.618709 GCCACAGAACAGTGTTAAGCTT 59.381 45.455 8.88 3.48 37.82 3.74
2867 3128 3.304057 GCCACAGAACAGTGTTAAGCTTC 60.304 47.826 8.88 0.00 37.82 3.86
2868 3129 3.876914 CCACAGAACAGTGTTAAGCTTCA 59.123 43.478 8.88 0.00 37.82 3.02
2869 3130 4.516698 CCACAGAACAGTGTTAAGCTTCAT 59.483 41.667 8.88 0.00 37.82 2.57
2870 3131 5.446709 CACAGAACAGTGTTAAGCTTCATG 58.553 41.667 8.88 0.00 34.83 3.07
2871 3132 4.023707 ACAGAACAGTGTTAAGCTTCATGC 60.024 41.667 8.88 0.00 43.29 4.06
2872 3133 4.023792 CAGAACAGTGTTAAGCTTCATGCA 60.024 41.667 8.88 0.00 45.94 3.96
2873 3134 3.904136 ACAGTGTTAAGCTTCATGCAC 57.096 42.857 0.00 8.27 45.94 4.57
2874 3135 2.554032 ACAGTGTTAAGCTTCATGCACC 59.446 45.455 0.00 0.00 45.94 5.01
2875 3136 2.553602 CAGTGTTAAGCTTCATGCACCA 59.446 45.455 0.00 0.00 45.94 4.17
2876 3137 2.816087 AGTGTTAAGCTTCATGCACCAG 59.184 45.455 0.00 0.00 45.94 4.00
2877 3138 1.541147 TGTTAAGCTTCATGCACCAGC 59.459 47.619 0.00 5.62 45.94 4.85
2878 3139 1.135286 GTTAAGCTTCATGCACCAGCC 60.135 52.381 0.00 0.00 45.94 4.85
2879 3140 0.038021 TAAGCTTCATGCACCAGCCA 59.962 50.000 0.00 0.00 45.94 4.75
2880 3141 0.828762 AAGCTTCATGCACCAGCCAA 60.829 50.000 9.44 0.00 45.94 4.52
2881 3142 1.080298 GCTTCATGCACCAGCCAAC 60.080 57.895 0.00 0.00 42.31 3.77
2882 3143 1.210931 CTTCATGCACCAGCCAACG 59.789 57.895 0.00 0.00 41.13 4.10
2883 3144 2.807631 CTTCATGCACCAGCCAACGC 62.808 60.000 0.00 0.00 41.13 4.84
2884 3145 3.672447 CATGCACCAGCCAACGCA 61.672 61.111 0.00 0.00 41.13 5.24
2885 3146 2.911509 ATGCACCAGCCAACGCAA 60.912 55.556 0.00 0.00 41.13 4.85
2886 3147 3.211564 ATGCACCAGCCAACGCAAC 62.212 57.895 0.00 0.00 41.13 4.17
2887 3148 4.645921 GCACCAGCCAACGCAACC 62.646 66.667 0.00 0.00 37.52 3.77
2888 3149 3.215568 CACCAGCCAACGCAACCA 61.216 61.111 0.00 0.00 37.52 3.67
2889 3150 2.441164 ACCAGCCAACGCAACCAA 60.441 55.556 0.00 0.00 37.52 3.67
2890 3151 2.055042 ACCAGCCAACGCAACCAAA 61.055 52.632 0.00 0.00 37.52 3.28
2891 3152 1.142748 CCAGCCAACGCAACCAAAA 59.857 52.632 0.00 0.00 37.52 2.44
2892 3153 0.875474 CCAGCCAACGCAACCAAAAG 60.875 55.000 0.00 0.00 37.52 2.27
2893 3154 0.179113 CAGCCAACGCAACCAAAAGT 60.179 50.000 0.00 0.00 37.52 2.66
2894 3155 1.066303 CAGCCAACGCAACCAAAAGTA 59.934 47.619 0.00 0.00 37.52 2.24
2895 3156 1.066454 AGCCAACGCAACCAAAAGTAC 59.934 47.619 0.00 0.00 37.52 2.73
2896 3157 1.749153 CCAACGCAACCAAAAGTACG 58.251 50.000 0.00 0.00 35.04 3.67
2897 3158 1.331138 CCAACGCAACCAAAAGTACGA 59.669 47.619 0.00 0.00 33.57 3.43
2898 3159 2.223294 CCAACGCAACCAAAAGTACGAA 60.223 45.455 0.00 0.00 33.57 3.85
2899 3160 2.742954 ACGCAACCAAAAGTACGAAC 57.257 45.000 0.00 0.00 33.57 3.95
2900 3161 2.008329 ACGCAACCAAAAGTACGAACA 58.992 42.857 0.00 0.00 33.57 3.18
2901 3162 2.031191 ACGCAACCAAAAGTACGAACAG 59.969 45.455 0.00 0.00 33.57 3.16
2902 3163 2.285756 CGCAACCAAAAGTACGAACAGA 59.714 45.455 0.00 0.00 31.56 3.41
2903 3164 3.059188 CGCAACCAAAAGTACGAACAGAT 60.059 43.478 0.00 0.00 31.56 2.90
2904 3165 4.150980 CGCAACCAAAAGTACGAACAGATA 59.849 41.667 0.00 0.00 31.56 1.98
2905 3166 5.618561 GCAACCAAAAGTACGAACAGATAG 58.381 41.667 0.00 0.00 0.00 2.08
2906 3167 5.407387 GCAACCAAAAGTACGAACAGATAGA 59.593 40.000 0.00 0.00 0.00 1.98
2907 3168 6.073440 GCAACCAAAAGTACGAACAGATAGAA 60.073 38.462 0.00 0.00 0.00 2.10
2908 3169 7.519328 GCAACCAAAAGTACGAACAGATAGAAA 60.519 37.037 0.00 0.00 0.00 2.52
2909 3170 7.653767 ACCAAAAGTACGAACAGATAGAAAG 57.346 36.000 0.00 0.00 0.00 2.62
2910 3171 6.649557 ACCAAAAGTACGAACAGATAGAAAGG 59.350 38.462 0.00 0.00 0.00 3.11
2911 3172 6.092259 CCAAAAGTACGAACAGATAGAAAGGG 59.908 42.308 0.00 0.00 0.00 3.95
2912 3173 4.388378 AGTACGAACAGATAGAAAGGGC 57.612 45.455 0.00 0.00 0.00 5.19
2913 3174 4.024670 AGTACGAACAGATAGAAAGGGCT 58.975 43.478 0.00 0.00 0.00 5.19
2914 3175 5.198965 AGTACGAACAGATAGAAAGGGCTA 58.801 41.667 0.00 0.00 0.00 3.93
2915 3176 4.657436 ACGAACAGATAGAAAGGGCTAG 57.343 45.455 0.00 0.00 0.00 3.42
2916 3177 4.024670 ACGAACAGATAGAAAGGGCTAGT 58.975 43.478 0.00 0.00 0.00 2.57
2917 3178 5.198965 ACGAACAGATAGAAAGGGCTAGTA 58.801 41.667 0.00 0.00 0.00 1.82
2918 3179 5.067544 ACGAACAGATAGAAAGGGCTAGTAC 59.932 44.000 0.00 0.00 0.00 2.73
2919 3180 5.067413 CGAACAGATAGAAAGGGCTAGTACA 59.933 44.000 0.00 0.00 0.00 2.90
2920 3181 6.405508 CGAACAGATAGAAAGGGCTAGTACAA 60.406 42.308 0.00 0.00 0.00 2.41
2921 3182 7.439108 AACAGATAGAAAGGGCTAGTACAAT 57.561 36.000 0.00 0.00 0.00 2.71
2922 3183 7.056844 ACAGATAGAAAGGGCTAGTACAATC 57.943 40.000 0.00 0.00 0.00 2.67
2923 3184 6.042208 ACAGATAGAAAGGGCTAGTACAATCC 59.958 42.308 0.00 0.00 0.00 3.01
2924 3185 6.042093 CAGATAGAAAGGGCTAGTACAATCCA 59.958 42.308 0.00 0.00 0.00 3.41
2925 3186 4.489306 AGAAAGGGCTAGTACAATCCAC 57.511 45.455 0.00 0.00 0.00 4.02
2926 3187 3.844211 AGAAAGGGCTAGTACAATCCACA 59.156 43.478 0.00 0.00 0.00 4.17
2927 3188 4.475016 AGAAAGGGCTAGTACAATCCACAT 59.525 41.667 0.00 0.00 0.00 3.21
2928 3189 5.665812 AGAAAGGGCTAGTACAATCCACATA 59.334 40.000 0.00 0.00 0.00 2.29
2929 3190 6.330250 AGAAAGGGCTAGTACAATCCACATAT 59.670 38.462 0.00 0.00 0.00 1.78
2930 3191 7.512746 AGAAAGGGCTAGTACAATCCACATATA 59.487 37.037 0.00 0.00 0.00 0.86
2931 3192 6.607004 AGGGCTAGTACAATCCACATATAC 57.393 41.667 0.00 0.00 0.00 1.47
2932 3193 6.323737 AGGGCTAGTACAATCCACATATACT 58.676 40.000 0.00 0.00 0.00 2.12
2933 3194 6.211584 AGGGCTAGTACAATCCACATATACTG 59.788 42.308 0.00 0.00 0.00 2.74
2934 3195 6.014499 GGGCTAGTACAATCCACATATACTGT 60.014 42.308 0.00 0.00 39.20 3.55
2935 3196 7.177921 GGGCTAGTACAATCCACATATACTGTA 59.822 40.741 0.00 0.00 35.91 2.74
2936 3197 8.582437 GGCTAGTACAATCCACATATACTGTAA 58.418 37.037 0.00 0.00 35.91 2.41
2937 3198 9.408069 GCTAGTACAATCCACATATACTGTAAC 57.592 37.037 0.00 0.00 35.91 2.50
2940 3201 8.202137 AGTACAATCCACATATACTGTAACACC 58.798 37.037 0.00 0.00 35.91 4.16
2941 3202 6.354130 ACAATCCACATATACTGTAACACCC 58.646 40.000 0.00 0.00 35.91 4.61
2942 3203 5.562298 ATCCACATATACTGTAACACCCC 57.438 43.478 0.00 0.00 35.91 4.95
2943 3204 3.712733 TCCACATATACTGTAACACCCCC 59.287 47.826 0.00 0.00 35.91 5.40
2944 3205 3.714798 CCACATATACTGTAACACCCCCT 59.285 47.826 0.00 0.00 35.91 4.79
2945 3206 4.202326 CCACATATACTGTAACACCCCCTC 60.202 50.000 0.00 0.00 35.91 4.30
2946 3207 4.654262 CACATATACTGTAACACCCCCTCT 59.346 45.833 0.00 0.00 35.91 3.69
2947 3208 4.900054 ACATATACTGTAACACCCCCTCTC 59.100 45.833 0.00 0.00 35.91 3.20
2948 3209 3.484953 ATACTGTAACACCCCCTCTCA 57.515 47.619 0.00 0.00 0.00 3.27
2949 3210 1.349067 ACTGTAACACCCCCTCTCAC 58.651 55.000 0.00 0.00 0.00 3.51
2950 3211 0.246635 CTGTAACACCCCCTCTCACG 59.753 60.000 0.00 0.00 0.00 4.35
2951 3212 0.470456 TGTAACACCCCCTCTCACGT 60.470 55.000 0.00 0.00 0.00 4.49
2952 3213 0.037605 GTAACACCCCCTCTCACGTG 60.038 60.000 9.94 9.94 0.00 4.49
2953 3214 0.470456 TAACACCCCCTCTCACGTGT 60.470 55.000 16.51 0.00 41.07 4.49
2954 3215 2.040009 AACACCCCCTCTCACGTGTG 62.040 60.000 16.51 13.78 39.33 3.82
2955 3216 2.200370 ACCCCCTCTCACGTGTGA 59.800 61.111 18.43 18.43 38.06 3.58
2956 3217 2.207924 ACCCCCTCTCACGTGTGAC 61.208 63.158 16.51 0.00 35.46 3.67
2967 3228 3.562639 CGTGTGACGGAGAAGACAA 57.437 52.632 0.00 0.00 38.08 3.18
2968 3229 1.409412 CGTGTGACGGAGAAGACAAG 58.591 55.000 0.00 0.00 38.08 3.16
2969 3230 1.269102 CGTGTGACGGAGAAGACAAGT 60.269 52.381 0.00 0.00 38.08 3.16
2970 3231 2.395654 GTGTGACGGAGAAGACAAGTC 58.604 52.381 0.00 0.00 0.00 3.01
2971 3232 2.028876 TGTGACGGAGAAGACAAGTCA 58.971 47.619 2.72 0.00 39.21 3.41
2972 3233 2.429250 TGTGACGGAGAAGACAAGTCAA 59.571 45.455 2.72 0.00 42.47 3.18
2973 3234 2.795470 GTGACGGAGAAGACAAGTCAAC 59.205 50.000 2.72 0.00 42.47 3.18
2974 3235 2.429250 TGACGGAGAAGACAAGTCAACA 59.571 45.455 2.72 0.00 38.66 3.33
2975 3236 2.795470 GACGGAGAAGACAAGTCAACAC 59.205 50.000 2.72 0.00 32.57 3.32
2976 3237 1.787155 CGGAGAAGACAAGTCAACACG 59.213 52.381 2.72 2.36 0.00 4.49
2977 3238 2.798499 CGGAGAAGACAAGTCAACACGT 60.798 50.000 2.72 0.00 0.00 4.49
2978 3239 2.540101 GGAGAAGACAAGTCAACACGTG 59.460 50.000 15.48 15.48 37.95 4.49
2979 3240 1.933853 AGAAGACAAGTCAACACGTGC 59.066 47.619 17.22 0.00 35.56 5.34
2980 3241 1.663643 GAAGACAAGTCAACACGTGCA 59.336 47.619 17.22 0.00 35.56 4.57
2981 3242 1.732941 AGACAAGTCAACACGTGCAA 58.267 45.000 17.22 0.00 35.56 4.08
2982 3243 1.396996 AGACAAGTCAACACGTGCAAC 59.603 47.619 17.22 11.35 35.56 4.17
2983 3244 1.396996 GACAAGTCAACACGTGCAACT 59.603 47.619 17.22 13.56 35.56 3.16
2984 3245 1.130373 ACAAGTCAACACGTGCAACTG 59.870 47.619 17.22 8.29 35.56 3.16
2985 3246 0.732571 AAGTCAACACGTGCAACTGG 59.267 50.000 17.22 0.00 31.75 4.00
2986 3247 0.107897 AGTCAACACGTGCAACTGGA 60.108 50.000 17.22 0.00 31.75 3.86
2987 3248 0.730265 GTCAACACGTGCAACTGGAA 59.270 50.000 17.22 0.00 31.75 3.53
2988 3249 1.013596 TCAACACGTGCAACTGGAAG 58.986 50.000 17.22 0.00 42.29 3.46
2989 3250 1.013596 CAACACGTGCAACTGGAAGA 58.986 50.000 17.22 0.00 37.43 2.87
2990 3251 1.003545 CAACACGTGCAACTGGAAGAG 60.004 52.381 17.22 0.00 37.43 2.85
2991 3252 0.464036 ACACGTGCAACTGGAAGAGA 59.536 50.000 17.22 0.00 37.43 3.10
2992 3253 1.143305 CACGTGCAACTGGAAGAGAG 58.857 55.000 0.82 0.00 37.43 3.20
2993 3254 0.601311 ACGTGCAACTGGAAGAGAGC 60.601 55.000 0.00 0.00 37.43 4.09
2994 3255 1.621301 CGTGCAACTGGAAGAGAGCG 61.621 60.000 0.00 0.00 37.43 5.03
2995 3256 0.319900 GTGCAACTGGAAGAGAGCGA 60.320 55.000 0.00 0.00 37.43 4.93
2996 3257 0.319900 TGCAACTGGAAGAGAGCGAC 60.320 55.000 0.00 0.00 37.43 5.19
2997 3258 1.347817 GCAACTGGAAGAGAGCGACG 61.348 60.000 0.00 0.00 37.43 5.12
2998 3259 0.734253 CAACTGGAAGAGAGCGACGG 60.734 60.000 0.00 0.00 37.43 4.79
2999 3260 2.202676 CTGGAAGAGAGCGACGGC 60.203 66.667 0.00 0.00 34.07 5.68
3000 3261 4.116328 TGGAAGAGAGCGACGGCG 62.116 66.667 6.12 6.12 46.35 6.46
3022 3283 1.891178 CGAAACTCGCGTATGACTCA 58.109 50.000 5.77 0.00 31.14 3.41
3023 3284 1.840741 CGAAACTCGCGTATGACTCAG 59.159 52.381 5.77 0.00 31.14 3.35
3024 3285 2.186076 GAAACTCGCGTATGACTCAGG 58.814 52.381 5.77 0.00 0.00 3.86
3025 3286 1.460504 AACTCGCGTATGACTCAGGA 58.539 50.000 5.77 0.00 0.00 3.86
3026 3287 1.018148 ACTCGCGTATGACTCAGGAG 58.982 55.000 5.77 0.00 0.00 3.69
3027 3288 0.309302 CTCGCGTATGACTCAGGAGG 59.691 60.000 5.77 0.00 0.00 4.30
3028 3289 1.299468 CGCGTATGACTCAGGAGGC 60.299 63.158 0.00 0.00 36.85 4.70
3029 3290 1.068250 GCGTATGACTCAGGAGGCC 59.932 63.158 0.00 0.00 34.90 5.19
3030 3291 1.395826 GCGTATGACTCAGGAGGCCT 61.396 60.000 3.86 3.86 34.90 5.19
3031 3292 0.671251 CGTATGACTCAGGAGGCCTC 59.329 60.000 25.59 25.59 34.90 4.70
3032 3293 1.752436 CGTATGACTCAGGAGGCCTCT 60.752 57.143 31.36 15.27 34.90 3.69
3033 3294 2.487445 CGTATGACTCAGGAGGCCTCTA 60.487 54.545 31.36 16.43 34.90 2.43
3034 3295 2.080654 ATGACTCAGGAGGCCTCTAC 57.919 55.000 31.36 16.52 34.90 2.59
3035 3296 0.394488 TGACTCAGGAGGCCTCTACG 60.394 60.000 31.36 19.48 34.90 3.51
3036 3297 0.394625 GACTCAGGAGGCCTCTACGT 60.395 60.000 31.36 21.74 0.00 3.57
3037 3298 0.681564 ACTCAGGAGGCCTCTACGTG 60.682 60.000 31.36 21.88 0.00 4.49
3038 3299 1.379977 TCAGGAGGCCTCTACGTGG 60.380 63.158 31.36 14.56 0.00 4.94
3039 3300 1.379977 CAGGAGGCCTCTACGTGGA 60.380 63.158 31.36 0.34 0.00 4.02
3040 3301 1.380112 AGGAGGCCTCTACGTGGAC 60.380 63.158 31.36 12.73 0.00 4.02
3041 3302 1.681327 GGAGGCCTCTACGTGGACA 60.681 63.158 31.36 0.00 34.31 4.02
3042 3303 1.511768 GAGGCCTCTACGTGGACAC 59.488 63.158 26.25 0.00 34.31 3.67
3043 3304 1.228769 AGGCCTCTACGTGGACACA 60.229 57.895 0.00 0.00 34.31 3.72
3044 3305 0.830444 AGGCCTCTACGTGGACACAA 60.830 55.000 0.00 0.00 34.31 3.33
3045 3306 0.034337 GGCCTCTACGTGGACACAAA 59.966 55.000 0.00 0.00 31.53 2.83
3046 3307 1.429463 GCCTCTACGTGGACACAAAG 58.571 55.000 0.00 0.00 0.00 2.77
3047 3308 1.939838 GCCTCTACGTGGACACAAAGG 60.940 57.143 0.00 0.00 0.00 3.11
3048 3309 1.337823 CCTCTACGTGGACACAAAGGG 60.338 57.143 0.00 0.00 0.00 3.95
3049 3310 0.682852 TCTACGTGGACACAAAGGGG 59.317 55.000 0.00 0.00 0.00 4.79
3050 3311 0.321298 CTACGTGGACACAAAGGGGG 60.321 60.000 0.00 0.00 0.00 5.40
3069 3330 5.351948 GGGGGCTATCAGCAATTTTTAAA 57.648 39.130 0.00 0.00 44.75 1.52
3070 3331 5.928976 GGGGGCTATCAGCAATTTTTAAAT 58.071 37.500 0.00 0.00 44.75 1.40
3071 3332 7.061566 GGGGGCTATCAGCAATTTTTAAATA 57.938 36.000 0.00 0.00 44.75 1.40
3072 3333 7.505258 GGGGGCTATCAGCAATTTTTAAATAA 58.495 34.615 0.00 0.00 44.75 1.40
3073 3334 7.990314 GGGGGCTATCAGCAATTTTTAAATAAA 59.010 33.333 0.00 0.00 44.75 1.40
3074 3335 9.559732 GGGGCTATCAGCAATTTTTAAATAAAT 57.440 29.630 0.00 0.00 44.75 1.40
3085 3346 9.173939 CAATTTTTAAATAAATTGCGCAAACCA 57.826 25.926 28.81 14.89 44.08 3.67
3086 3347 8.947304 ATTTTTAAATAAATTGCGCAAACCAG 57.053 26.923 28.81 0.00 0.00 4.00
3087 3348 6.473397 TTTAAATAAATTGCGCAAACCAGG 57.527 33.333 28.81 0.00 0.00 4.45
3088 3349 3.951775 AATAAATTGCGCAAACCAGGA 57.048 38.095 28.81 9.81 0.00 3.86
3089 3350 2.715737 TAAATTGCGCAAACCAGGAC 57.284 45.000 28.81 0.00 0.00 3.85
3090 3351 1.039856 AAATTGCGCAAACCAGGACT 58.960 45.000 28.81 4.60 0.00 3.85
3091 3352 1.039856 AATTGCGCAAACCAGGACTT 58.960 45.000 28.81 11.35 0.00 3.01
3092 3353 0.314935 ATTGCGCAAACCAGGACTTG 59.685 50.000 28.81 0.00 0.00 3.16
3093 3354 0.749818 TTGCGCAAACCAGGACTTGA 60.750 50.000 22.78 0.00 0.00 3.02
3094 3355 0.749818 TGCGCAAACCAGGACTTGAA 60.750 50.000 8.16 0.00 0.00 2.69
3095 3356 0.317854 GCGCAAACCAGGACTTGAAC 60.318 55.000 0.30 0.00 0.00 3.18
3096 3357 1.308998 CGCAAACCAGGACTTGAACT 58.691 50.000 9.48 0.00 0.00 3.01
3097 3358 1.264288 CGCAAACCAGGACTTGAACTC 59.736 52.381 9.48 0.00 0.00 3.01
3098 3359 2.297701 GCAAACCAGGACTTGAACTCA 58.702 47.619 9.48 0.00 0.00 3.41
3099 3360 2.687935 GCAAACCAGGACTTGAACTCAA 59.312 45.455 9.48 0.00 0.00 3.02
3112 3373 4.527509 TGAACTCAAGACCTTAGCTCTG 57.472 45.455 0.00 0.00 0.00 3.35
3113 3374 4.152647 TGAACTCAAGACCTTAGCTCTGA 58.847 43.478 0.00 0.00 0.00 3.27
3114 3375 4.774726 TGAACTCAAGACCTTAGCTCTGAT 59.225 41.667 0.00 0.00 0.00 2.90
3115 3376 5.952347 TGAACTCAAGACCTTAGCTCTGATA 59.048 40.000 0.00 0.00 0.00 2.15
3116 3377 5.845391 ACTCAAGACCTTAGCTCTGATAC 57.155 43.478 0.00 0.00 0.00 2.24
3117 3378 4.647399 ACTCAAGACCTTAGCTCTGATACC 59.353 45.833 0.00 0.00 0.00 2.73
3118 3379 4.610333 TCAAGACCTTAGCTCTGATACCA 58.390 43.478 0.00 0.00 0.00 3.25
3119 3380 5.211973 TCAAGACCTTAGCTCTGATACCAT 58.788 41.667 0.00 0.00 0.00 3.55
3120 3381 5.069648 TCAAGACCTTAGCTCTGATACCATG 59.930 44.000 0.00 0.00 0.00 3.66
3121 3382 4.551671 AGACCTTAGCTCTGATACCATGT 58.448 43.478 0.00 0.00 0.00 3.21
3122 3383 4.965532 AGACCTTAGCTCTGATACCATGTT 59.034 41.667 0.00 0.00 0.00 2.71
3123 3384 6.136857 AGACCTTAGCTCTGATACCATGTTA 58.863 40.000 0.00 0.00 0.00 2.41
3124 3385 6.611642 AGACCTTAGCTCTGATACCATGTTAA 59.388 38.462 0.00 0.00 0.00 2.01
3125 3386 6.821388 ACCTTAGCTCTGATACCATGTTAAG 58.179 40.000 0.00 0.00 0.00 1.85
3126 3387 5.698545 CCTTAGCTCTGATACCATGTTAAGC 59.301 44.000 0.00 0.00 0.00 3.09
3127 3388 6.463614 CCTTAGCTCTGATACCATGTTAAGCT 60.464 42.308 0.00 0.66 41.41 3.74
3128 3389 5.365021 AGCTCTGATACCATGTTAAGCTT 57.635 39.130 3.48 3.48 35.42 3.74
3129 3390 5.363939 AGCTCTGATACCATGTTAAGCTTC 58.636 41.667 0.00 0.00 35.42 3.86
3130 3391 5.104776 AGCTCTGATACCATGTTAAGCTTCA 60.105 40.000 0.00 0.00 35.42 3.02
3131 3392 5.762218 GCTCTGATACCATGTTAAGCTTCAT 59.238 40.000 0.00 0.00 0.00 2.57
3132 3393 6.293298 GCTCTGATACCATGTTAAGCTTCATG 60.293 42.308 17.24 17.24 40.46 3.07
3133 3394 5.528690 TCTGATACCATGTTAAGCTTCATGC 59.471 40.000 18.30 8.69 39.74 4.06
3134 3395 5.192176 TGATACCATGTTAAGCTTCATGCA 58.808 37.500 18.30 10.61 45.94 3.96
3135 3396 3.855689 ACCATGTTAAGCTTCATGCAC 57.144 42.857 18.30 4.70 45.94 4.57
3136 3397 2.493278 ACCATGTTAAGCTTCATGCACC 59.507 45.455 18.30 0.00 45.94 5.01
3137 3398 2.492881 CCATGTTAAGCTTCATGCACCA 59.507 45.455 18.30 0.00 45.94 4.17
3138 3399 3.428452 CCATGTTAAGCTTCATGCACCAG 60.428 47.826 18.30 5.27 45.94 4.00
3139 3400 1.541147 TGTTAAGCTTCATGCACCAGC 59.459 47.619 0.00 5.62 45.94 4.85
3140 3401 1.135286 GTTAAGCTTCATGCACCAGCC 60.135 52.381 0.00 0.00 45.94 4.85
3141 3402 0.038021 TAAGCTTCATGCACCAGCCA 59.962 50.000 0.00 0.00 45.94 4.75
3142 3403 0.828762 AAGCTTCATGCACCAGCCAA 60.829 50.000 9.44 0.00 45.94 4.52
3143 3404 1.080298 GCTTCATGCACCAGCCAAC 60.080 57.895 0.00 0.00 42.31 3.77
3144 3405 1.210931 CTTCATGCACCAGCCAACG 59.789 57.895 0.00 0.00 41.13 4.10
3145 3406 2.807631 CTTCATGCACCAGCCAACGC 62.808 60.000 0.00 0.00 41.13 4.84
3146 3407 3.672447 CATGCACCAGCCAACGCA 61.672 61.111 0.00 0.00 41.13 5.24
3147 3408 2.911509 ATGCACCAGCCAACGCAA 60.912 55.556 0.00 0.00 41.13 4.85
3148 3409 3.211564 ATGCACCAGCCAACGCAAC 62.212 57.895 0.00 0.00 41.13 4.17
3149 3410 4.645921 GCACCAGCCAACGCAACC 62.646 66.667 0.00 0.00 37.52 3.77
3150 3411 3.215568 CACCAGCCAACGCAACCA 61.216 61.111 0.00 0.00 37.52 3.67
3151 3412 2.441164 ACCAGCCAACGCAACCAA 60.441 55.556 0.00 0.00 37.52 3.67
3152 3413 2.055042 ACCAGCCAACGCAACCAAA 61.055 52.632 0.00 0.00 37.52 3.28
3153 3414 1.142748 CCAGCCAACGCAACCAAAA 59.857 52.632 0.00 0.00 37.52 2.44
3154 3415 0.875474 CCAGCCAACGCAACCAAAAG 60.875 55.000 0.00 0.00 37.52 2.27
3155 3416 0.179113 CAGCCAACGCAACCAAAAGT 60.179 50.000 0.00 0.00 37.52 2.66
3156 3417 0.102300 AGCCAACGCAACCAAAAGTC 59.898 50.000 0.00 0.00 37.52 3.01
3157 3418 0.874175 GCCAACGCAACCAAAAGTCC 60.874 55.000 0.00 0.00 34.03 3.85
3158 3419 0.457851 CCAACGCAACCAAAAGTCCA 59.542 50.000 0.00 0.00 0.00 4.02
3159 3420 1.134965 CCAACGCAACCAAAAGTCCAA 60.135 47.619 0.00 0.00 0.00 3.53
3160 3421 2.611518 CAACGCAACCAAAAGTCCAAA 58.388 42.857 0.00 0.00 0.00 3.28
3161 3422 2.287393 ACGCAACCAAAAGTCCAAAC 57.713 45.000 0.00 0.00 0.00 2.93
3162 3423 1.822371 ACGCAACCAAAAGTCCAAACT 59.178 42.857 0.00 0.00 37.32 2.66
3163 3424 2.192624 CGCAACCAAAAGTCCAAACTG 58.807 47.619 0.00 0.00 35.36 3.16
3164 3425 2.159310 CGCAACCAAAAGTCCAAACTGA 60.159 45.455 0.00 0.00 35.36 3.41
3165 3426 3.490761 CGCAACCAAAAGTCCAAACTGAT 60.491 43.478 0.00 0.00 35.36 2.90
3166 3427 3.803778 GCAACCAAAAGTCCAAACTGATG 59.196 43.478 0.00 0.00 35.36 3.07
3167 3428 4.370917 CAACCAAAAGTCCAAACTGATGG 58.629 43.478 7.83 7.83 43.11 3.51
3174 3435 1.923356 TCCAAACTGATGGAAAGGGC 58.077 50.000 4.82 0.00 46.36 5.19
3175 3436 1.428912 TCCAAACTGATGGAAAGGGCT 59.571 47.619 4.82 0.00 46.36 5.19
3176 3437 2.647299 TCCAAACTGATGGAAAGGGCTA 59.353 45.455 4.82 0.00 46.36 3.93
3177 3438 3.019564 CCAAACTGATGGAAAGGGCTAG 58.980 50.000 0.00 0.00 43.54 3.42
3178 3439 3.562176 CCAAACTGATGGAAAGGGCTAGT 60.562 47.826 0.00 0.00 43.54 2.57
3179 3440 4.324254 CCAAACTGATGGAAAGGGCTAGTA 60.324 45.833 0.00 0.00 43.54 1.82
3180 3441 4.489306 AACTGATGGAAAGGGCTAGTAC 57.511 45.455 0.00 0.00 0.00 2.73
3181 3442 3.450904 ACTGATGGAAAGGGCTAGTACA 58.549 45.455 0.00 0.00 0.00 2.90
3182 3443 3.844211 ACTGATGGAAAGGGCTAGTACAA 59.156 43.478 0.00 0.00 0.00 2.41
3183 3444 4.475016 ACTGATGGAAAGGGCTAGTACAAT 59.525 41.667 0.00 0.00 0.00 2.71
3184 3445 5.036117 TGATGGAAAGGGCTAGTACAATC 57.964 43.478 0.00 0.00 0.00 2.67
3185 3446 3.926058 TGGAAAGGGCTAGTACAATCC 57.074 47.619 0.00 0.00 0.00 3.01
3186 3447 3.186283 TGGAAAGGGCTAGTACAATCCA 58.814 45.455 0.00 5.08 33.54 3.41
3187 3448 3.054655 TGGAAAGGGCTAGTACAATCCAC 60.055 47.826 0.00 0.00 31.12 4.02
3188 3449 3.054655 GGAAAGGGCTAGTACAATCCACA 60.055 47.826 0.00 0.00 0.00 4.17
3189 3450 4.385310 GGAAAGGGCTAGTACAATCCACAT 60.385 45.833 0.00 0.00 0.00 3.21
3190 3451 5.163237 GGAAAGGGCTAGTACAATCCACATA 60.163 44.000 0.00 0.00 0.00 2.29
3191 3452 6.465894 GGAAAGGGCTAGTACAATCCACATAT 60.466 42.308 0.00 0.00 0.00 1.78
3192 3453 7.256547 GGAAAGGGCTAGTACAATCCACATATA 60.257 40.741 0.00 0.00 0.00 0.86
3193 3454 6.607004 AGGGCTAGTACAATCCACATATAC 57.393 41.667 0.00 0.00 0.00 1.47
3194 3455 6.323737 AGGGCTAGTACAATCCACATATACT 58.676 40.000 0.00 0.00 0.00 2.12
3195 3456 6.211584 AGGGCTAGTACAATCCACATATACTG 59.788 42.308 0.00 0.00 0.00 2.74
3196 3457 6.014499 GGGCTAGTACAATCCACATATACTGT 60.014 42.308 0.00 0.00 39.20 3.55
3197 3458 7.177921 GGGCTAGTACAATCCACATATACTGTA 59.822 40.741 0.00 0.00 35.91 2.74
3198 3459 8.582437 GGCTAGTACAATCCACATATACTGTAA 58.418 37.037 0.00 0.00 35.91 2.41
3199 3460 9.408069 GCTAGTACAATCCACATATACTGTAAC 57.592 37.037 0.00 0.00 35.91 2.50
3230 3491 2.629617 CACCAAGCAAACCTGAAATCCT 59.370 45.455 0.00 0.00 0.00 3.24
3231 3492 3.070015 CACCAAGCAAACCTGAAATCCTT 59.930 43.478 0.00 0.00 0.00 3.36
3233 3494 3.321682 CCAAGCAAACCTGAAATCCTTCA 59.678 43.478 0.00 0.00 39.30 3.02
3342 3603 9.765795 AAGTCTAAATTCACTATAAAGGATCCG 57.234 33.333 5.98 0.00 0.00 4.18
3350 3611 4.747108 CACTATAAAGGATCCGAAGCACTG 59.253 45.833 5.98 0.00 0.00 3.66
3361 6927 5.545658 TCCGAAGCACTGAATGTATTTTC 57.454 39.130 0.00 0.00 0.00 2.29
3362 6928 4.092821 TCCGAAGCACTGAATGTATTTTCG 59.907 41.667 0.00 0.00 36.06 3.46
3386 6952 8.703336 TCGAGAAATAGAATATGCAAATCTTCG 58.297 33.333 0.00 1.27 0.00 3.79
3395 6961 1.879380 TGCAAATCTTCGGTTCCAGTG 59.121 47.619 0.00 0.00 0.00 3.66
3397 6963 1.200020 CAAATCTTCGGTTCCAGTGCC 59.800 52.381 0.00 0.00 0.00 5.01
3415 6981 1.589716 CCTTGCTTTGCCTCTTCCCG 61.590 60.000 0.00 0.00 0.00 5.14
3416 6982 2.205243 CTTGCTTTGCCTCTTCCCGC 62.205 60.000 0.00 0.00 0.00 6.13
3425 6991 0.250727 CCTCTTCCCGCCAACAAAGA 60.251 55.000 0.00 0.00 0.00 2.52
3427 6993 0.536460 TCTTCCCGCCAACAAAGACC 60.536 55.000 0.00 0.00 0.00 3.85
3428 6994 0.821711 CTTCCCGCCAACAAAGACCA 60.822 55.000 0.00 0.00 0.00 4.02
3429 6995 0.821711 TTCCCGCCAACAAAGACCAG 60.822 55.000 0.00 0.00 0.00 4.00
3447 7013 2.093288 CCAGAGCAGATCCAAAGCACTA 60.093 50.000 0.00 0.00 0.00 2.74
3482 7049 4.714802 TGTGCTTATCCACACATAGGTACT 59.285 41.667 0.00 0.00 41.67 2.73
3483 7050 5.188948 TGTGCTTATCCACACATAGGTACTT 59.811 40.000 0.00 0.00 41.67 2.24
3484 7051 5.753921 GTGCTTATCCACACATAGGTACTTC 59.246 44.000 0.00 0.00 36.95 3.01
3485 7052 5.661312 TGCTTATCCACACATAGGTACTTCT 59.339 40.000 0.00 0.00 41.75 2.85
3486 7053 6.156256 TGCTTATCCACACATAGGTACTTCTT 59.844 38.462 0.00 0.00 41.75 2.52
3487 7054 6.702282 GCTTATCCACACATAGGTACTTCTTC 59.298 42.308 0.00 0.00 41.75 2.87
3488 7055 5.615925 ATCCACACATAGGTACTTCTTCC 57.384 43.478 0.00 0.00 41.75 3.46
3489 7056 3.446161 TCCACACATAGGTACTTCTTCCG 59.554 47.826 0.00 0.00 41.75 4.30
3490 7057 3.194968 CCACACATAGGTACTTCTTCCGT 59.805 47.826 0.00 0.00 41.75 4.69
3491 7058 4.322499 CCACACATAGGTACTTCTTCCGTT 60.322 45.833 0.00 0.00 41.75 4.44
3492 7059 5.235516 CACACATAGGTACTTCTTCCGTTT 58.764 41.667 0.00 0.00 41.75 3.60
3493 7060 5.699458 CACACATAGGTACTTCTTCCGTTTT 59.301 40.000 0.00 0.00 41.75 2.43
3494 7061 6.204108 CACACATAGGTACTTCTTCCGTTTTT 59.796 38.462 0.00 0.00 41.75 1.94
3495 7062 7.385752 CACACATAGGTACTTCTTCCGTTTTTA 59.614 37.037 0.00 0.00 41.75 1.52
3496 7063 8.098912 ACACATAGGTACTTCTTCCGTTTTTAT 58.901 33.333 0.00 0.00 41.75 1.40
3497 7064 8.943002 CACATAGGTACTTCTTCCGTTTTTATT 58.057 33.333 0.00 0.00 41.75 1.40
3498 7065 9.511272 ACATAGGTACTTCTTCCGTTTTTATTT 57.489 29.630 0.00 0.00 41.75 1.40
3502 7069 9.212641 AGGTACTTCTTCCGTTTTTATTTACTC 57.787 33.333 0.00 0.00 27.25 2.59
3503 7070 8.446273 GGTACTTCTTCCGTTTTTATTTACTCC 58.554 37.037 0.00 0.00 0.00 3.85
3504 7071 7.125536 ACTTCTTCCGTTTTTATTTACTCCG 57.874 36.000 0.00 0.00 0.00 4.63
3505 7072 5.535043 TCTTCCGTTTTTATTTACTCCGC 57.465 39.130 0.00 0.00 0.00 5.54
3506 7073 4.996122 TCTTCCGTTTTTATTTACTCCGCA 59.004 37.500 0.00 0.00 0.00 5.69
3507 7074 5.644636 TCTTCCGTTTTTATTTACTCCGCAT 59.355 36.000 0.00 0.00 0.00 4.73
3508 7075 6.817641 TCTTCCGTTTTTATTTACTCCGCATA 59.182 34.615 0.00 0.00 0.00 3.14
3509 7076 7.496591 TCTTCCGTTTTTATTTACTCCGCATAT 59.503 33.333 0.00 0.00 0.00 1.78
3510 7077 7.556733 TCCGTTTTTATTTACTCCGCATATT 57.443 32.000 0.00 0.00 0.00 1.28
3511 7078 8.659925 TCCGTTTTTATTTACTCCGCATATTA 57.340 30.769 0.00 0.00 0.00 0.98
3512 7079 8.767085 TCCGTTTTTATTTACTCCGCATATTAG 58.233 33.333 0.00 0.00 0.00 1.73
3513 7080 8.767085 CCGTTTTTATTTACTCCGCATATTAGA 58.233 33.333 0.00 0.00 0.00 2.10
3514 7081 9.793245 CGTTTTTATTTACTCCGCATATTAGAG 57.207 33.333 0.00 0.00 0.00 2.43
3519 7086 7.948278 ATTTACTCCGCATATTAGAGTTGAC 57.052 36.000 4.78 0.00 41.09 3.18
3520 7087 6.459670 TTACTCCGCATATTAGAGTTGACA 57.540 37.500 4.78 0.00 41.09 3.58
3521 7088 5.339008 ACTCCGCATATTAGAGTTGACAA 57.661 39.130 0.00 0.00 37.60 3.18
3522 7089 5.730550 ACTCCGCATATTAGAGTTGACAAA 58.269 37.500 0.00 0.00 37.60 2.83
3523 7090 6.349300 ACTCCGCATATTAGAGTTGACAAAT 58.651 36.000 0.00 0.00 37.60 2.32
3524 7091 7.497595 ACTCCGCATATTAGAGTTGACAAATA 58.502 34.615 0.00 0.00 37.60 1.40
3525 7092 8.150945 ACTCCGCATATTAGAGTTGACAAATAT 58.849 33.333 0.00 0.00 37.60 1.28
3526 7093 9.639601 CTCCGCATATTAGAGTTGACAAATATA 57.360 33.333 0.00 0.00 0.00 0.86
3629 7196 6.573617 CTTGGTCAAAGTTTACAAAGCTTG 57.426 37.500 0.00 0.00 0.00 4.01
3630 7197 5.906113 TGGTCAAAGTTTACAAAGCTTGA 57.094 34.783 0.00 0.00 0.00 3.02
3631 7198 5.646606 TGGTCAAAGTTTACAAAGCTTGAC 58.353 37.500 0.00 14.67 38.59 3.18
3632 7199 5.417580 TGGTCAAAGTTTACAAAGCTTGACT 59.582 36.000 18.78 0.00 38.94 3.41
3633 7200 6.071616 TGGTCAAAGTTTACAAAGCTTGACTT 60.072 34.615 18.78 3.36 38.94 3.01
3654 7221 6.441093 CTTTGACCAAAGCTAATATGCAGA 57.559 37.500 9.25 0.00 40.94 4.26
3655 7222 5.818136 TTGACCAAAGCTAATATGCAGAC 57.182 39.130 0.00 0.00 34.99 3.51
3656 7223 5.102953 TGACCAAAGCTAATATGCAGACT 57.897 39.130 0.00 0.00 34.99 3.24
3657 7224 6.233905 TGACCAAAGCTAATATGCAGACTA 57.766 37.500 0.00 0.00 34.99 2.59
3658 7225 6.649155 TGACCAAAGCTAATATGCAGACTAA 58.351 36.000 0.00 0.00 34.99 2.24
3659 7226 7.109501 TGACCAAAGCTAATATGCAGACTAAA 58.890 34.615 0.00 0.00 34.99 1.85
3660 7227 7.775093 TGACCAAAGCTAATATGCAGACTAAAT 59.225 33.333 0.00 0.00 34.99 1.40
3661 7228 9.273016 GACCAAAGCTAATATGCAGACTAAATA 57.727 33.333 0.00 0.00 34.99 1.40
3662 7229 9.627123 ACCAAAGCTAATATGCAGACTAAATAA 57.373 29.630 0.00 0.00 34.99 1.40
3672 7239 6.773976 TGCAGACTAAATAAAAATGGAGGG 57.226 37.500 0.00 0.00 0.00 4.30
3673 7240 6.489603 TGCAGACTAAATAAAAATGGAGGGA 58.510 36.000 0.00 0.00 0.00 4.20
3674 7241 6.603201 TGCAGACTAAATAAAAATGGAGGGAG 59.397 38.462 0.00 0.00 0.00 4.30
3675 7242 6.603599 GCAGACTAAATAAAAATGGAGGGAGT 59.396 38.462 0.00 0.00 0.00 3.85
3676 7243 7.773690 GCAGACTAAATAAAAATGGAGGGAGTA 59.226 37.037 0.00 0.00 0.00 2.59
3677 7244 9.110502 CAGACTAAATAAAAATGGAGGGAGTAC 57.889 37.037 0.00 0.00 0.00 2.73
3678 7245 8.832735 AGACTAAATAAAAATGGAGGGAGTACA 58.167 33.333 0.00 0.00 0.00 2.90
3679 7246 9.457436 GACTAAATAAAAATGGAGGGAGTACAA 57.543 33.333 0.00 0.00 0.00 2.41
3680 7247 9.239551 ACTAAATAAAAATGGAGGGAGTACAAC 57.760 33.333 0.00 0.00 0.00 3.32
3681 7248 9.238368 CTAAATAAAAATGGAGGGAGTACAACA 57.762 33.333 0.00 0.00 0.00 3.33
3682 7249 8.485578 AAATAAAAATGGAGGGAGTACAACAA 57.514 30.769 0.00 0.00 0.00 2.83
3683 7250 8.664669 AATAAAAATGGAGGGAGTACAACAAT 57.335 30.769 0.00 0.00 0.00 2.71
3684 7251 9.762381 AATAAAAATGGAGGGAGTACAACAATA 57.238 29.630 0.00 0.00 0.00 1.90
3685 7252 7.703058 AAAAATGGAGGGAGTACAACAATAG 57.297 36.000 0.00 0.00 0.00 1.73
3686 7253 6.388619 AAATGGAGGGAGTACAACAATAGT 57.611 37.500 0.00 0.00 0.00 2.12
3712 7279 6.642707 CTAATCGATTAGGACCTCAAGTCT 57.357 41.667 29.74 0.00 45.54 3.24
3713 7280 4.927978 ATCGATTAGGACCTCAAGTCTG 57.072 45.455 0.00 0.00 45.54 3.51
3714 7281 3.964411 TCGATTAGGACCTCAAGTCTGA 58.036 45.455 0.00 0.00 45.54 3.27
3715 7282 4.341487 TCGATTAGGACCTCAAGTCTGAA 58.659 43.478 0.00 0.00 45.54 3.02
3716 7283 4.770531 TCGATTAGGACCTCAAGTCTGAAA 59.229 41.667 0.00 0.00 45.54 2.69
3717 7284 4.865365 CGATTAGGACCTCAAGTCTGAAAC 59.135 45.833 0.00 0.00 45.54 2.78
3718 7285 5.336849 CGATTAGGACCTCAAGTCTGAAACT 60.337 44.000 0.00 0.00 45.54 2.66
3719 7286 3.760580 AGGACCTCAAGTCTGAAACTG 57.239 47.619 0.00 0.00 45.54 3.16
3720 7287 3.309296 AGGACCTCAAGTCTGAAACTGA 58.691 45.455 0.00 0.00 45.54 3.41
3721 7288 3.070302 AGGACCTCAAGTCTGAAACTGAC 59.930 47.826 0.00 0.00 45.54 3.51
3722 7289 3.070302 GGACCTCAAGTCTGAAACTGACT 59.930 47.826 0.00 0.00 45.54 3.41
3723 7290 4.303282 GACCTCAAGTCTGAAACTGACTC 58.697 47.826 10.64 0.00 40.75 3.36
3724 7291 3.070302 ACCTCAAGTCTGAAACTGACTCC 59.930 47.826 10.64 0.00 40.75 3.85
3725 7292 3.323403 CCTCAAGTCTGAAACTGACTCCT 59.677 47.826 10.64 0.00 40.75 3.69
3726 7293 4.524714 CCTCAAGTCTGAAACTGACTCCTA 59.475 45.833 10.64 1.70 40.75 2.94
3727 7294 5.455056 TCAAGTCTGAAACTGACTCCTAC 57.545 43.478 10.64 0.00 40.75 3.18
3728 7295 5.141182 TCAAGTCTGAAACTGACTCCTACT 58.859 41.667 10.64 0.00 40.75 2.57
3729 7296 5.241949 TCAAGTCTGAAACTGACTCCTACTC 59.758 44.000 10.64 0.00 40.75 2.59
3730 7297 4.730966 AGTCTGAAACTGACTCCTACTCA 58.269 43.478 0.00 0.00 38.01 3.41
3731 7298 5.141182 AGTCTGAAACTGACTCCTACTCAA 58.859 41.667 0.00 0.00 38.01 3.02
3732 7299 5.010213 AGTCTGAAACTGACTCCTACTCAAC 59.990 44.000 0.00 0.00 38.01 3.18
3733 7300 5.010213 GTCTGAAACTGACTCCTACTCAACT 59.990 44.000 0.00 0.00 31.22 3.16
3734 7301 6.207025 GTCTGAAACTGACTCCTACTCAACTA 59.793 42.308 0.00 0.00 31.22 2.24
3735 7302 6.431543 TCTGAAACTGACTCCTACTCAACTAG 59.568 42.308 0.00 0.00 0.00 2.57
3736 7303 6.069331 TGAAACTGACTCCTACTCAACTAGT 58.931 40.000 0.00 0.00 42.62 2.57
3737 7304 6.550108 TGAAACTGACTCCTACTCAACTAGTT 59.450 38.462 1.12 1.12 39.80 2.24
3738 7305 7.722728 TGAAACTGACTCCTACTCAACTAGTTA 59.277 37.037 8.04 0.00 39.80 2.24
3739 7306 7.690952 AACTGACTCCTACTCAACTAGTTAG 57.309 40.000 8.04 8.84 39.80 2.34
3740 7307 7.018487 ACTGACTCCTACTCAACTAGTTAGA 57.982 40.000 8.04 7.58 39.80 2.10
3741 7308 7.107542 ACTGACTCCTACTCAACTAGTTAGAG 58.892 42.308 22.70 22.70 39.93 2.43
3742 7309 7.018487 TGACTCCTACTCAACTAGTTAGAGT 57.982 40.000 28.06 28.06 45.19 3.24
3744 7311 7.261688 ACTCCTACTCAACTAGTTAGAGTCT 57.738 40.000 28.49 16.74 41.78 3.24
3745 7312 8.378115 ACTCCTACTCAACTAGTTAGAGTCTA 57.622 38.462 28.49 18.57 41.78 2.59
3746 7313 8.824783 ACTCCTACTCAACTAGTTAGAGTCTAA 58.175 37.037 28.49 18.11 41.78 2.10
3747 7314 9.669887 CTCCTACTCAACTAGTTAGAGTCTAAA 57.330 37.037 28.49 17.88 41.39 1.85
3751 7318 8.474710 ACTCAACTAGTTAGAGTCTAAAACCA 57.525 34.615 23.60 0.00 38.13 3.67
3752 7319 9.091220 ACTCAACTAGTTAGAGTCTAAAACCAT 57.909 33.333 23.60 0.00 38.13 3.55
3753 7320 9.575783 CTCAACTAGTTAGAGTCTAAAACCATC 57.424 37.037 14.20 1.38 0.00 3.51
3754 7321 8.242053 TCAACTAGTTAGAGTCTAAAACCATCG 58.758 37.037 14.20 1.93 0.00 3.84
3755 7322 6.562518 ACTAGTTAGAGTCTAAAACCATCGC 58.437 40.000 14.20 0.00 0.00 4.58
3756 7323 5.401531 AGTTAGAGTCTAAAACCATCGCA 57.598 39.130 14.20 0.00 0.00 5.10
3757 7324 5.169295 AGTTAGAGTCTAAAACCATCGCAC 58.831 41.667 14.20 0.00 0.00 5.34
3758 7325 3.678056 AGAGTCTAAAACCATCGCACA 57.322 42.857 0.00 0.00 0.00 4.57
3759 7326 4.002906 AGAGTCTAAAACCATCGCACAA 57.997 40.909 0.00 0.00 0.00 3.33
3760 7327 4.385825 AGAGTCTAAAACCATCGCACAAA 58.614 39.130 0.00 0.00 0.00 2.83
3761 7328 4.819630 AGAGTCTAAAACCATCGCACAAAA 59.180 37.500 0.00 0.00 0.00 2.44
3762 7329 5.298276 AGAGTCTAAAACCATCGCACAAAAA 59.702 36.000 0.00 0.00 0.00 1.94
3787 7354 5.725325 AACAGTAAGAGTCTAAGACCACC 57.275 43.478 0.00 0.00 32.18 4.61
3788 7355 5.000570 ACAGTAAGAGTCTAAGACCACCT 57.999 43.478 0.00 0.00 32.18 4.00
3789 7356 5.011586 ACAGTAAGAGTCTAAGACCACCTC 58.988 45.833 0.00 0.00 32.18 3.85
3790 7357 5.010933 CAGTAAGAGTCTAAGACCACCTCA 58.989 45.833 0.00 0.00 32.18 3.86
3791 7358 5.654650 CAGTAAGAGTCTAAGACCACCTCAT 59.345 44.000 0.00 0.00 32.18 2.90
3792 7359 5.654650 AGTAAGAGTCTAAGACCACCTCATG 59.345 44.000 0.00 0.00 32.18 3.07
3793 7360 2.763448 AGAGTCTAAGACCACCTCATGC 59.237 50.000 0.00 0.00 32.18 4.06
3794 7361 2.497675 GAGTCTAAGACCACCTCATGCA 59.502 50.000 0.00 0.00 32.18 3.96
3795 7362 2.906389 AGTCTAAGACCACCTCATGCAA 59.094 45.455 0.00 0.00 32.18 4.08
3796 7363 3.055530 AGTCTAAGACCACCTCATGCAAG 60.056 47.826 0.00 0.00 32.18 4.01
3797 7364 2.012673 CTAAGACCACCTCATGCAAGC 58.987 52.381 0.00 0.00 0.00 4.01
3798 7365 0.610232 AAGACCACCTCATGCAAGCC 60.610 55.000 0.00 0.00 0.00 4.35
3799 7366 1.303561 GACCACCTCATGCAAGCCA 60.304 57.895 0.00 0.00 0.00 4.75
3800 7367 0.895100 GACCACCTCATGCAAGCCAA 60.895 55.000 0.00 0.00 0.00 4.52
3801 7368 0.469705 ACCACCTCATGCAAGCCAAA 60.470 50.000 0.00 0.00 0.00 3.28
3802 7369 0.899720 CCACCTCATGCAAGCCAAAT 59.100 50.000 0.00 0.00 0.00 2.32
3803 7370 2.101783 CCACCTCATGCAAGCCAAATA 58.898 47.619 0.00 0.00 0.00 1.40
3804 7371 2.100252 CCACCTCATGCAAGCCAAATAG 59.900 50.000 0.00 0.00 0.00 1.73
3805 7372 1.753073 ACCTCATGCAAGCCAAATAGC 59.247 47.619 0.00 0.00 0.00 2.97
3806 7373 1.068127 CCTCATGCAAGCCAAATAGCC 59.932 52.381 0.00 0.00 0.00 3.93
3807 7374 2.029623 CTCATGCAAGCCAAATAGCCT 58.970 47.619 0.00 0.00 0.00 4.58
3808 7375 1.752498 TCATGCAAGCCAAATAGCCTG 59.248 47.619 0.00 0.00 0.00 4.85
3809 7376 1.479323 CATGCAAGCCAAATAGCCTGT 59.521 47.619 0.00 0.00 0.00 4.00
3810 7377 1.631405 TGCAAGCCAAATAGCCTGTT 58.369 45.000 0.00 0.00 0.00 3.16
3811 7378 1.969923 TGCAAGCCAAATAGCCTGTTT 59.030 42.857 0.00 0.00 0.00 2.83
3812 7379 3.161067 TGCAAGCCAAATAGCCTGTTTA 58.839 40.909 0.00 0.00 0.00 2.01
3813 7380 3.576118 TGCAAGCCAAATAGCCTGTTTAA 59.424 39.130 0.00 0.00 0.00 1.52
3814 7381 3.926527 GCAAGCCAAATAGCCTGTTTAAC 59.073 43.478 0.00 0.00 0.00 2.01
3815 7382 4.560513 GCAAGCCAAATAGCCTGTTTAACA 60.561 41.667 0.00 0.00 0.00 2.41
3816 7383 5.537188 CAAGCCAAATAGCCTGTTTAACAA 58.463 37.500 0.00 0.00 0.00 2.83
3817 7384 5.134202 AGCCAAATAGCCTGTTTAACAAC 57.866 39.130 0.00 0.00 0.00 3.32
3818 7385 3.917985 GCCAAATAGCCTGTTTAACAACG 59.082 43.478 0.00 0.00 35.40 4.10
3819 7386 4.320641 GCCAAATAGCCTGTTTAACAACGA 60.321 41.667 0.00 0.00 35.40 3.85
3820 7387 5.764131 CCAAATAGCCTGTTTAACAACGAA 58.236 37.500 0.00 0.00 35.40 3.85
3821 7388 6.210078 CCAAATAGCCTGTTTAACAACGAAA 58.790 36.000 0.00 0.00 35.40 3.46
3822 7389 6.143278 CCAAATAGCCTGTTTAACAACGAAAC 59.857 38.462 0.00 0.00 35.40 2.78
3823 7390 6.628919 AATAGCCTGTTTAACAACGAAACT 57.371 33.333 0.00 0.00 37.62 2.66
3824 7391 4.976224 AGCCTGTTTAACAACGAAACTT 57.024 36.364 0.00 0.00 37.62 2.66
3825 7392 4.668289 AGCCTGTTTAACAACGAAACTTG 58.332 39.130 0.00 0.00 37.62 3.16
3826 7393 3.242016 GCCTGTTTAACAACGAAACTTGC 59.758 43.478 0.00 0.00 37.62 4.01
3829 7396 4.795268 TGTTTAACAACGAAACTTGCACA 58.205 34.783 0.00 0.00 37.62 4.57
3842 7409 2.490115 ACTTGCACAGAACACGGAAAAA 59.510 40.909 0.00 0.00 0.00 1.94
3887 7454 3.214328 GACAACACTGTCCAACTCCAAT 58.786 45.455 0.00 0.00 45.41 3.16
4028 7600 1.296056 TTTTACTTCAGCGGCTCGGC 61.296 55.000 0.00 0.00 0.00 5.54
4029 7601 3.659089 TTACTTCAGCGGCTCGGCC 62.659 63.158 0.00 4.96 46.75 6.13
4057 7629 3.858868 TTGACGGCGCCACAGAGAC 62.859 63.158 28.98 10.54 0.00 3.36
4062 7634 0.739462 CGGCGCCACAGAGACAATAA 60.739 55.000 28.98 0.00 0.00 1.40
4063 7635 1.448985 GGCGCCACAGAGACAATAAA 58.551 50.000 24.80 0.00 0.00 1.40
4064 7636 2.017049 GGCGCCACAGAGACAATAAAT 58.983 47.619 24.80 0.00 0.00 1.40
4065 7637 2.032178 GGCGCCACAGAGACAATAAATC 59.968 50.000 24.80 0.00 0.00 2.17
4071 7643 7.348201 CGCCACAGAGACAATAAATCTTATTC 58.652 38.462 0.00 0.00 0.00 1.75
4073 7645 8.341173 GCCACAGAGACAATAAATCTTATTCTG 58.659 37.037 0.00 0.00 0.00 3.02
4074 7646 8.834465 CCACAGAGACAATAAATCTTATTCTGG 58.166 37.037 9.17 0.00 0.00 3.86
4076 7648 8.552296 ACAGAGACAATAAATCTTATTCTGGGT 58.448 33.333 9.17 0.00 0.00 4.51
4278 7866 3.254060 GAACTGCAACTTGATCGCTCTA 58.746 45.455 0.00 0.00 0.00 2.43
4327 7915 4.398988 TGAAGATGATGATTTTTGGGGACG 59.601 41.667 0.00 0.00 0.00 4.79
4344 7932 2.417719 GACGTGATGAAAGCTCAAGGT 58.582 47.619 0.00 0.00 34.49 3.50
4345 7933 2.146342 ACGTGATGAAAGCTCAAGGTG 58.854 47.619 0.00 0.00 34.49 4.00
5072 8669 1.188863 CCAATCCCCCAAGAGCTTTG 58.811 55.000 0.00 0.00 0.00 2.77
5381 8978 2.158755 GGGCTGGCAATACACTACTGAT 60.159 50.000 2.88 0.00 0.00 2.90
5460 9057 2.151502 GGAGACCTCAGAGGATGTCA 57.848 55.000 24.45 0.00 40.07 3.58
5470 9067 5.221422 CCTCAGAGGATGTCAATAACTCCTC 60.221 48.000 11.62 10.36 44.42 3.71
5783 9380 3.763897 GCACCCAGTTGGAGAATTTGTAT 59.236 43.478 0.00 0.00 37.39 2.29
5929 14994 4.226761 CACCTTCGTGCAATAACCTTTTC 58.773 43.478 0.00 0.00 32.04 2.29
6178 15258 6.878389 GGGATTATTCAATTTGAAGCAACCAA 59.122 34.615 16.34 5.23 40.05 3.67
6230 15310 0.099436 GCCTGCAGCTTATTCCAACG 59.901 55.000 8.66 0.00 38.99 4.10
6631 19195 5.012239 TGGTGAGATTGGATCCTTCAAAAG 58.988 41.667 14.23 0.00 0.00 2.27
6671 19235 2.546643 TTCATGCCCCAGCCTCCAA 61.547 57.895 0.00 0.00 38.69 3.53
6712 19276 2.234296 CCTCCTTCCCCAGCTTGGT 61.234 63.158 2.68 0.00 35.17 3.67
6788 19352 5.811100 CGAAGAGTACCCTGAAGAAATAACC 59.189 44.000 0.00 0.00 0.00 2.85
6825 19389 1.361668 CCCGAAGCTGACAACCATCG 61.362 60.000 0.00 0.00 0.00 3.84
6827 19391 1.645034 CGAAGCTGACAACCATCGAT 58.355 50.000 0.00 0.00 32.38 3.59
6828 19392 2.002586 CGAAGCTGACAACCATCGATT 58.997 47.619 0.00 0.00 32.38 3.34
6867 22153 1.412710 TGGAGAACATATGCGAGGTCC 59.587 52.381 1.58 3.20 0.00 4.46
7038 25046 3.637273 ACCGCCCTGTCCACTTCC 61.637 66.667 0.00 0.00 0.00 3.46
7094 25102 2.284699 CCCAGGGTCTCCGTCCTT 60.285 66.667 0.00 0.00 38.33 3.36
7218 25238 3.129638 CCTAGGTGAACTCTACACTCTGC 59.870 52.174 0.00 0.00 38.20 4.26
7287 25319 2.345876 GTTTGGTTTGCTTTGTGTGCT 58.654 42.857 0.00 0.00 0.00 4.40
7290 25322 2.344950 TGGTTTGCTTTGTGTGCTTTG 58.655 42.857 0.00 0.00 0.00 2.77
7292 25324 2.094099 GGTTTGCTTTGTGTGCTTTGTG 59.906 45.455 0.00 0.00 0.00 3.33
7293 25325 2.736192 GTTTGCTTTGTGTGCTTTGTGT 59.264 40.909 0.00 0.00 0.00 3.72
7420 25555 1.577328 GCCTGCTATGCGTGTGTGTT 61.577 55.000 0.00 0.00 0.00 3.32
7423 25558 1.530720 CTGCTATGCGTGTGTGTTTGA 59.469 47.619 0.00 0.00 0.00 2.69
7481 25616 3.491104 GCGTGTATCTACAAGGCTAGCTT 60.491 47.826 15.72 3.40 38.04 3.74
7697 25846 9.326413 GAACTCTATGCTTATTTTAGGTAGCAA 57.674 33.333 0.00 0.00 45.66 3.91
7698 25847 9.681062 AACTCTATGCTTATTTTAGGTAGCAAA 57.319 29.630 0.00 0.00 45.66 3.68
7803 25952 3.844640 AGCAGTTTGGGGTGTTAATTCT 58.155 40.909 0.00 0.00 0.00 2.40
7962 26707 5.180304 TGCAACGCTTTGTATATGAAGAACA 59.820 36.000 4.72 0.00 34.90 3.18
7981 26991 2.371841 ACACATGCTAGGTTCCAACAGA 59.628 45.455 0.00 0.00 0.00 3.41
8185 27196 5.708877 ATAACAGATCTAAGGTACCTCGC 57.291 43.478 16.64 3.18 0.00 5.03
8189 27200 1.945394 GATCTAAGGTACCTCGCGTCA 59.055 52.381 16.64 0.00 0.00 4.35
8195 27206 4.682334 TACCTCGCGTCACCCCCA 62.682 66.667 5.77 0.00 0.00 4.96
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 2.783275 GCAGCTGCAGTGACGATG 59.217 61.111 33.36 0.00 41.59 3.84
224 225 6.323482 TGTTAACCAGTACCAGTACACAACTA 59.677 38.462 10.41 0.00 35.76 2.24
263 272 7.548780 ACAAGAACAAGCACAACATGTTAAATT 59.451 29.630 11.53 1.42 40.15 1.82
318 327 1.100510 TCCATCAGTCTAACCCGTCG 58.899 55.000 0.00 0.00 0.00 5.12
323 332 4.943705 TCTGCAAATTCCATCAGTCTAACC 59.056 41.667 0.00 0.00 0.00 2.85
335 344 3.946558 AGAAGATCTGCTCTGCAAATTCC 59.053 43.478 0.00 0.00 38.41 3.01
336 345 4.877251 AGAGAAGATCTGCTCTGCAAATTC 59.123 41.667 29.50 3.57 39.86 2.17
340 349 3.098377 AGAGAGAAGATCTGCTCTGCAA 58.902 45.455 34.07 0.00 41.33 4.08
417 426 2.070028 GGAGAAGCAACCGAAAGACTC 58.930 52.381 0.00 0.00 0.00 3.36
433 442 0.843309 ATGAGAGAGAGCGAGGGAGA 59.157 55.000 0.00 0.00 0.00 3.71
437 446 0.667993 GACCATGAGAGAGAGCGAGG 59.332 60.000 0.00 0.00 0.00 4.63
446 455 4.720649 TCCTCGTTTAAGACCATGAGAG 57.279 45.455 0.00 0.00 0.00 3.20
486 495 4.993584 GTGCACGATCCAATCTTCATCTAT 59.006 41.667 0.00 0.00 0.00 1.98
487 496 4.100035 AGTGCACGATCCAATCTTCATCTA 59.900 41.667 12.01 0.00 0.00 1.98
499 508 2.673368 CCAACTAAAGAGTGCACGATCC 59.327 50.000 12.01 2.33 35.52 3.36
504 513 3.877508 AGTGAACCAACTAAAGAGTGCAC 59.122 43.478 9.40 9.40 35.52 4.57
508 566 3.883489 GCCAAGTGAACCAACTAAAGAGT 59.117 43.478 0.00 0.00 37.59 3.24
577 635 3.198068 GGAGCAGAAATGCAAGATACGA 58.802 45.455 2.73 0.00 37.25 3.43
814 882 0.037590 ATTTGTGCTTCGCCCCTGTA 59.962 50.000 0.00 0.00 0.00 2.74
1003 1071 1.486211 ACCCATGGAAGAGGACTACG 58.514 55.000 15.22 0.00 0.00 3.51
1019 1087 6.018994 CGTAAGATGCACAAAGAGTATTACCC 60.019 42.308 0.00 0.00 43.02 3.69
1282 1352 5.236047 GGTTGTATATCTTCTTGAGCAGCAG 59.764 44.000 0.00 0.00 0.00 4.24
1400 1470 9.635404 TCCGTCCCATAATATAAGAAACATTTT 57.365 29.630 0.00 0.00 0.00 1.82
1401 1471 9.284968 CTCCGTCCCATAATATAAGAAACATTT 57.715 33.333 0.00 0.00 0.00 2.32
1402 1472 7.883311 CCTCCGTCCCATAATATAAGAAACATT 59.117 37.037 0.00 0.00 0.00 2.71
1403 1473 7.394816 CCTCCGTCCCATAATATAAGAAACAT 58.605 38.462 0.00 0.00 0.00 2.71
1404 1474 6.239772 CCCTCCGTCCCATAATATAAGAAACA 60.240 42.308 0.00 0.00 0.00 2.83
1405 1475 6.013984 TCCCTCCGTCCCATAATATAAGAAAC 60.014 42.308 0.00 0.00 0.00 2.78
1406 1476 6.086095 TCCCTCCGTCCCATAATATAAGAAA 58.914 40.000 0.00 0.00 0.00 2.52
1407 1477 5.657446 TCCCTCCGTCCCATAATATAAGAA 58.343 41.667 0.00 0.00 0.00 2.52
1408 1478 5.222484 ACTCCCTCCGTCCCATAATATAAGA 60.222 44.000 0.00 0.00 0.00 2.10
1489 1559 6.318144 CCATGATCTAGAACTTTGCTTGTGAT 59.682 38.462 0.00 0.00 0.00 3.06
1490 1560 5.645067 CCATGATCTAGAACTTTGCTTGTGA 59.355 40.000 0.00 0.00 0.00 3.58
1491 1561 5.163683 CCCATGATCTAGAACTTTGCTTGTG 60.164 44.000 0.00 0.00 0.00 3.33
1492 1562 4.946157 CCCATGATCTAGAACTTTGCTTGT 59.054 41.667 0.00 0.00 0.00 3.16
1493 1563 4.201990 GCCCATGATCTAGAACTTTGCTTG 60.202 45.833 0.00 0.00 0.00 4.01
1494 1564 3.950395 GCCCATGATCTAGAACTTTGCTT 59.050 43.478 0.00 0.00 0.00 3.91
1495 1565 3.549794 GCCCATGATCTAGAACTTTGCT 58.450 45.455 0.00 0.00 0.00 3.91
1504 1574 3.797039 TCACTTTTCGCCCATGATCTAG 58.203 45.455 0.00 0.00 0.00 2.43
1511 1581 1.474077 GATTGCTCACTTTTCGCCCAT 59.526 47.619 0.00 0.00 0.00 4.00
1512 1582 0.881118 GATTGCTCACTTTTCGCCCA 59.119 50.000 0.00 0.00 0.00 5.36
1568 1638 0.593618 TTTTAAGGCATTGCGTCGCA 59.406 45.000 17.58 17.58 36.47 5.10
1671 1743 2.003196 CCTCTCTTTCAGAACTCCGC 57.997 55.000 0.00 0.00 0.00 5.54
1674 1746 1.625818 TGGGCCTCTCTTTCAGAACTC 59.374 52.381 4.53 0.00 0.00 3.01
1676 1748 2.568623 TTGGGCCTCTCTTTCAGAAC 57.431 50.000 4.53 0.00 0.00 3.01
1747 1820 0.656785 GAACGGAGAGACGACGCTAT 59.343 55.000 0.00 0.00 37.61 2.97
1941 2104 1.913317 TTCGTCGTCATGCAGAGATG 58.087 50.000 0.00 0.00 0.00 2.90
1942 2105 2.544694 GGATTCGTCGTCATGCAGAGAT 60.545 50.000 0.00 0.00 0.00 2.75
1951 2120 2.202388 GTCGCGGATTCGTCGTCA 60.202 61.111 6.13 0.00 38.89 4.35
2058 2249 1.322442 GCAATCCCATAAGCCTGACC 58.678 55.000 0.00 0.00 0.00 4.02
2116 2327 2.666272 TCAACATTTGGCACCACCTA 57.334 45.000 0.00 0.00 40.22 3.08
2271 2528 2.172851 TTCGCGGGAACAGTAACATT 57.827 45.000 11.32 0.00 0.00 2.71
2325 2582 0.521291 GGCTCATGCAAACGCTACAA 59.479 50.000 0.00 0.00 41.91 2.41
2351 2608 5.568482 TGTGATCAAATTTTAAGATCGCGG 58.432 37.500 18.28 0.00 46.75 6.46
2352 2609 6.742718 ACTTGTGATCAAATTTTAAGATCGCG 59.257 34.615 18.28 0.00 46.75 5.87
2353 2610 8.452989 AACTTGTGATCAAATTTTAAGATCGC 57.547 30.769 17.38 17.38 45.04 4.58
2366 2623 9.897744 GATTGAATTCAGTTAACTTGTGATCAA 57.102 29.630 5.07 12.82 0.00 2.57
2367 2624 9.288576 AGATTGAATTCAGTTAACTTGTGATCA 57.711 29.630 5.07 4.76 0.00 2.92
2423 2680 5.560966 ATGTAGGGCAATTAAGAAACACG 57.439 39.130 0.00 0.00 0.00 4.49
2435 2692 3.053693 AGGATAGTTGCAATGTAGGGCAA 60.054 43.478 0.59 0.00 46.84 4.52
2465 2722 9.423061 GTGCTTTTACATTCCAGAAATATTTGT 57.577 29.630 5.17 0.00 0.00 2.83
2496 2753 7.869937 CCATCTACACACAAGATACTATCAAGG 59.130 40.741 0.00 0.00 32.40 3.61
2563 2820 4.441217 CCATGAGTGAGTACCATGAGTGAG 60.441 50.000 9.75 0.00 37.52 3.51
2564 2821 3.448660 CCATGAGTGAGTACCATGAGTGA 59.551 47.826 9.75 0.00 37.52 3.41
2565 2822 3.196469 ACCATGAGTGAGTACCATGAGTG 59.804 47.826 9.75 0.00 37.52 3.51
2566 2823 3.445008 ACCATGAGTGAGTACCATGAGT 58.555 45.455 9.75 0.00 37.52 3.41
2567 2824 4.889995 TCTACCATGAGTGAGTACCATGAG 59.110 45.833 9.75 2.49 37.52 2.90
2568 2825 4.867086 TCTACCATGAGTGAGTACCATGA 58.133 43.478 9.75 0.00 37.52 3.07
2569 2826 5.598416 TTCTACCATGAGTGAGTACCATG 57.402 43.478 0.00 0.00 36.28 3.66
2570 2827 5.721960 ACTTTCTACCATGAGTGAGTACCAT 59.278 40.000 0.00 0.00 0.00 3.55
2571 2828 5.047306 CACTTTCTACCATGAGTGAGTACCA 60.047 44.000 4.39 0.00 41.46 3.25
2572 2829 5.185249 TCACTTTCTACCATGAGTGAGTACC 59.815 44.000 8.22 0.00 42.42 3.34
2573 2830 6.268825 TCACTTTCTACCATGAGTGAGTAC 57.731 41.667 8.22 0.00 42.42 2.73
2644 2901 5.010012 CCATTTGTACACTTGGAGCTTTCTT 59.990 40.000 15.31 0.00 0.00 2.52
2654 2911 8.964476 ATTAGATACTCCCATTTGTACACTTG 57.036 34.615 0.00 0.00 0.00 3.16
2681 2938 0.537143 TCCAGAGCGTTTTGGTGCAT 60.537 50.000 8.69 0.00 35.89 3.96
2692 2949 3.181482 TGAAGCTTCTATCTTCCAGAGCG 60.181 47.826 26.09 0.00 39.24 5.03
2697 2954 8.255111 TGATTAGATGAAGCTTCTATCTTCCA 57.745 34.615 29.65 23.72 39.24 3.53
2716 2973 3.976793 ACATTCAATGCGCCTGATTAG 57.023 42.857 4.18 3.71 0.00 1.73
2723 2980 0.171903 AGCTCAACATTCAATGCGCC 59.828 50.000 4.18 0.00 0.00 6.53
2727 2984 2.259618 GCAGCAGCTCAACATTCAATG 58.740 47.619 0.00 0.00 37.91 2.82
2743 3000 4.379174 TTCGGAAGAACCAGCAGC 57.621 55.556 0.00 0.00 46.92 5.25
2757 3014 8.341477 ACGAATACTCTATTTCTCATGTTTCG 57.659 34.615 0.00 0.00 37.62 3.46
2758 3015 9.907576 CAACGAATACTCTATTTCTCATGTTTC 57.092 33.333 0.00 0.00 0.00 2.78
2761 3018 6.986817 CCCAACGAATACTCTATTTCTCATGT 59.013 38.462 0.00 0.00 0.00 3.21
2797 3054 7.554476 CGATGAGATATGACTACCTCCTAATCA 59.446 40.741 0.00 0.00 0.00 2.57
2813 3070 3.843027 AGAAAGGGGCATCGATGAGATAT 59.157 43.478 29.20 9.45 37.52 1.63
2815 3072 2.053244 AGAAAGGGGCATCGATGAGAT 58.947 47.619 29.20 8.22 41.01 2.75
2816 3073 1.500474 AGAAAGGGGCATCGATGAGA 58.500 50.000 29.20 0.00 0.00 3.27
2817 3074 2.338577 AAGAAAGGGGCATCGATGAG 57.661 50.000 29.20 3.74 0.00 2.90
2818 3075 2.806945 AAAGAAAGGGGCATCGATGA 57.193 45.000 29.20 0.00 0.00 2.92
2820 3077 5.993748 TTTTAAAAGAAAGGGGCATCGAT 57.006 34.783 0.00 0.00 0.00 3.59
2822 3083 5.163864 GCAATTTTAAAAGAAAGGGGCATCG 60.164 40.000 6.79 0.00 0.00 3.84
2825 3086 4.141390 TGGCAATTTTAAAAGAAAGGGGCA 60.141 37.500 6.79 7.40 32.56 5.36
2833 3094 6.756074 CACTGTTCTGTGGCAATTTTAAAAGA 59.244 34.615 6.79 0.00 34.56 2.52
2835 3096 6.402222 ACACTGTTCTGTGGCAATTTTAAAA 58.598 32.000 2.51 2.51 41.84 1.52
2838 3099 5.590530 AACACTGTTCTGTGGCAATTTTA 57.409 34.783 12.82 0.00 41.84 1.52
2841 3102 4.499696 GCTTAACACTGTTCTGTGGCAATT 60.500 41.667 12.82 3.02 41.84 2.32
2848 3109 4.023707 GCATGAAGCTTAACACTGTTCTGT 60.024 41.667 0.00 0.00 41.15 3.41
2853 3114 2.554032 GGTGCATGAAGCTTAACACTGT 59.446 45.455 15.83 0.00 45.94 3.55
2854 3115 2.553602 TGGTGCATGAAGCTTAACACTG 59.446 45.455 15.83 0.74 45.94 3.66
2855 3116 2.816087 CTGGTGCATGAAGCTTAACACT 59.184 45.455 15.83 0.00 45.94 3.55
2856 3117 2.669391 GCTGGTGCATGAAGCTTAACAC 60.669 50.000 4.14 5.53 45.94 3.32
2857 3118 1.541147 GCTGGTGCATGAAGCTTAACA 59.459 47.619 4.14 0.00 45.94 2.41
2858 3119 1.135286 GGCTGGTGCATGAAGCTTAAC 60.135 52.381 15.20 0.00 45.94 2.01
2859 3120 1.176527 GGCTGGTGCATGAAGCTTAA 58.823 50.000 15.20 0.00 45.94 1.85
2860 3121 0.038021 TGGCTGGTGCATGAAGCTTA 59.962 50.000 15.20 5.38 45.94 3.09
2861 3122 0.828762 TTGGCTGGTGCATGAAGCTT 60.829 50.000 15.20 0.00 45.94 3.74
2862 3123 1.228644 TTGGCTGGTGCATGAAGCT 60.229 52.632 15.20 0.00 45.94 3.74
2863 3124 1.080298 GTTGGCTGGTGCATGAAGC 60.080 57.895 0.00 9.13 45.96 3.86
2864 3125 1.210931 CGTTGGCTGGTGCATGAAG 59.789 57.895 0.00 0.00 41.91 3.02
2865 3126 2.918345 GCGTTGGCTGGTGCATGAA 61.918 57.895 0.00 0.00 41.91 2.57
2866 3127 3.364441 GCGTTGGCTGGTGCATGA 61.364 61.111 0.00 0.00 41.91 3.07
2867 3128 3.210223 TTGCGTTGGCTGGTGCATG 62.210 57.895 0.00 0.00 41.91 4.06
2868 3129 2.911509 TTGCGTTGGCTGGTGCAT 60.912 55.556 0.00 0.00 41.91 3.96
2869 3130 3.898509 GTTGCGTTGGCTGGTGCA 61.899 61.111 0.00 0.00 41.91 4.57
2870 3131 4.645921 GGTTGCGTTGGCTGGTGC 62.646 66.667 0.00 0.00 40.82 5.01
2871 3132 2.290122 TTTGGTTGCGTTGGCTGGTG 62.290 55.000 0.00 0.00 40.82 4.17
2872 3133 1.608717 TTTTGGTTGCGTTGGCTGGT 61.609 50.000 0.00 0.00 40.82 4.00
2873 3134 0.875474 CTTTTGGTTGCGTTGGCTGG 60.875 55.000 0.00 0.00 40.82 4.85
2874 3135 0.179113 ACTTTTGGTTGCGTTGGCTG 60.179 50.000 0.00 0.00 40.82 4.85
2875 3136 1.066454 GTACTTTTGGTTGCGTTGGCT 59.934 47.619 0.00 0.00 40.82 4.75
2876 3137 1.483316 GTACTTTTGGTTGCGTTGGC 58.517 50.000 0.00 0.00 40.52 4.52
2877 3138 1.331138 TCGTACTTTTGGTTGCGTTGG 59.669 47.619 0.00 0.00 0.00 3.77
2878 3139 2.741122 TCGTACTTTTGGTTGCGTTG 57.259 45.000 0.00 0.00 0.00 4.10
2879 3140 2.419324 TGTTCGTACTTTTGGTTGCGTT 59.581 40.909 0.00 0.00 0.00 4.84
2880 3141 2.008329 TGTTCGTACTTTTGGTTGCGT 58.992 42.857 0.00 0.00 0.00 5.24
2881 3142 2.285756 TCTGTTCGTACTTTTGGTTGCG 59.714 45.455 0.00 0.00 0.00 4.85
2882 3143 3.955771 TCTGTTCGTACTTTTGGTTGC 57.044 42.857 0.00 0.00 0.00 4.17
2883 3144 7.416154 TTCTATCTGTTCGTACTTTTGGTTG 57.584 36.000 0.00 0.00 0.00 3.77
2884 3145 7.172703 CCTTTCTATCTGTTCGTACTTTTGGTT 59.827 37.037 0.00 0.00 0.00 3.67
2885 3146 6.649557 CCTTTCTATCTGTTCGTACTTTTGGT 59.350 38.462 0.00 0.00 0.00 3.67
2886 3147 6.092259 CCCTTTCTATCTGTTCGTACTTTTGG 59.908 42.308 0.00 0.00 0.00 3.28
2887 3148 6.402226 GCCCTTTCTATCTGTTCGTACTTTTG 60.402 42.308 0.00 0.00 0.00 2.44
2888 3149 5.642491 GCCCTTTCTATCTGTTCGTACTTTT 59.358 40.000 0.00 0.00 0.00 2.27
2889 3150 5.046520 AGCCCTTTCTATCTGTTCGTACTTT 60.047 40.000 0.00 0.00 0.00 2.66
2890 3151 4.466726 AGCCCTTTCTATCTGTTCGTACTT 59.533 41.667 0.00 0.00 0.00 2.24
2891 3152 4.024670 AGCCCTTTCTATCTGTTCGTACT 58.975 43.478 0.00 0.00 0.00 2.73
2892 3153 4.388378 AGCCCTTTCTATCTGTTCGTAC 57.612 45.455 0.00 0.00 0.00 3.67
2893 3154 5.198965 ACTAGCCCTTTCTATCTGTTCGTA 58.801 41.667 0.00 0.00 0.00 3.43
2894 3155 4.024670 ACTAGCCCTTTCTATCTGTTCGT 58.975 43.478 0.00 0.00 0.00 3.85
2895 3156 4.657436 ACTAGCCCTTTCTATCTGTTCG 57.343 45.455 0.00 0.00 0.00 3.95
2896 3157 6.466885 TGTACTAGCCCTTTCTATCTGTTC 57.533 41.667 0.00 0.00 0.00 3.18
2897 3158 6.869206 TTGTACTAGCCCTTTCTATCTGTT 57.131 37.500 0.00 0.00 0.00 3.16
2898 3159 6.042208 GGATTGTACTAGCCCTTTCTATCTGT 59.958 42.308 0.00 0.00 0.00 3.41
2899 3160 6.042093 TGGATTGTACTAGCCCTTTCTATCTG 59.958 42.308 9.13 0.00 0.00 2.90
2900 3161 6.042208 GTGGATTGTACTAGCCCTTTCTATCT 59.958 42.308 9.13 0.00 0.00 1.98
2901 3162 6.183360 TGTGGATTGTACTAGCCCTTTCTATC 60.183 42.308 9.13 0.00 0.00 2.08
2902 3163 5.665812 TGTGGATTGTACTAGCCCTTTCTAT 59.334 40.000 9.13 0.00 0.00 1.98
2903 3164 5.027460 TGTGGATTGTACTAGCCCTTTCTA 58.973 41.667 9.13 0.00 0.00 2.10
2904 3165 3.844211 TGTGGATTGTACTAGCCCTTTCT 59.156 43.478 9.13 0.00 0.00 2.52
2905 3166 4.216411 TGTGGATTGTACTAGCCCTTTC 57.784 45.455 9.13 0.00 0.00 2.62
2906 3167 4.862641 ATGTGGATTGTACTAGCCCTTT 57.137 40.909 9.13 0.00 0.00 3.11
2907 3168 6.787957 AGTATATGTGGATTGTACTAGCCCTT 59.212 38.462 9.13 2.39 0.00 3.95
2908 3169 6.211584 CAGTATATGTGGATTGTACTAGCCCT 59.788 42.308 9.13 0.00 0.00 5.19
2909 3170 6.014499 ACAGTATATGTGGATTGTACTAGCCC 60.014 42.308 9.13 1.71 41.91 5.19
2910 3171 6.994221 ACAGTATATGTGGATTGTACTAGCC 58.006 40.000 4.54 4.54 41.91 3.93
2911 3172 9.408069 GTTACAGTATATGTGGATTGTACTAGC 57.592 37.037 0.00 0.00 43.80 3.42
2914 3175 8.202137 GGTGTTACAGTATATGTGGATTGTACT 58.798 37.037 0.00 0.00 43.80 2.73
2915 3176 7.440255 GGGTGTTACAGTATATGTGGATTGTAC 59.560 40.741 0.00 0.00 43.80 2.90
2916 3177 7.419287 GGGGTGTTACAGTATATGTGGATTGTA 60.419 40.741 0.00 0.00 43.80 2.41
2917 3178 6.354130 GGGTGTTACAGTATATGTGGATTGT 58.646 40.000 0.00 0.00 43.80 2.71
2918 3179 5.763204 GGGGTGTTACAGTATATGTGGATTG 59.237 44.000 0.00 0.00 43.80 2.67
2919 3180 5.163131 GGGGGTGTTACAGTATATGTGGATT 60.163 44.000 0.00 0.00 43.80 3.01
2920 3181 4.349930 GGGGGTGTTACAGTATATGTGGAT 59.650 45.833 0.00 0.00 43.80 3.41
2921 3182 3.712733 GGGGGTGTTACAGTATATGTGGA 59.287 47.826 0.00 0.00 43.80 4.02
2922 3183 3.714798 AGGGGGTGTTACAGTATATGTGG 59.285 47.826 0.00 0.00 43.80 4.17
2923 3184 4.654262 AGAGGGGGTGTTACAGTATATGTG 59.346 45.833 0.00 0.00 43.80 3.21
2924 3185 4.892198 AGAGGGGGTGTTACAGTATATGT 58.108 43.478 0.00 0.00 46.45 2.29
2925 3186 4.899457 TGAGAGGGGGTGTTACAGTATATG 59.101 45.833 0.00 0.00 0.00 1.78
2926 3187 4.900054 GTGAGAGGGGGTGTTACAGTATAT 59.100 45.833 0.00 0.00 0.00 0.86
2927 3188 4.284178 GTGAGAGGGGGTGTTACAGTATA 58.716 47.826 0.00 0.00 0.00 1.47
2928 3189 3.105283 GTGAGAGGGGGTGTTACAGTAT 58.895 50.000 0.00 0.00 0.00 2.12
2929 3190 2.532843 GTGAGAGGGGGTGTTACAGTA 58.467 52.381 0.00 0.00 0.00 2.74
2930 3191 1.349067 GTGAGAGGGGGTGTTACAGT 58.651 55.000 0.00 0.00 0.00 3.55
2931 3192 0.246635 CGTGAGAGGGGGTGTTACAG 59.753 60.000 0.00 0.00 0.00 2.74
2932 3193 0.470456 ACGTGAGAGGGGGTGTTACA 60.470 55.000 0.00 0.00 0.00 2.41
2933 3194 0.037605 CACGTGAGAGGGGGTGTTAC 60.038 60.000 10.90 0.00 0.00 2.50
2934 3195 0.470456 ACACGTGAGAGGGGGTGTTA 60.470 55.000 25.01 0.00 40.46 2.41
2935 3196 1.764854 ACACGTGAGAGGGGGTGTT 60.765 57.895 25.01 0.00 40.46 3.32
2936 3197 2.122989 ACACGTGAGAGGGGGTGT 60.123 61.111 25.01 0.00 38.69 4.16
2937 3198 2.207229 TCACACGTGAGAGGGGGTG 61.207 63.158 25.01 7.41 34.14 4.61
2938 3199 2.200370 TCACACGTGAGAGGGGGT 59.800 61.111 25.01 0.00 34.14 4.95
2939 3200 2.657237 GTCACACGTGAGAGGGGG 59.343 66.667 25.01 0.00 40.75 5.40
2940 3201 2.258591 CGTCACACGTGAGAGGGG 59.741 66.667 25.01 8.32 40.75 4.79
2941 3202 2.201436 CTCCGTCACACGTGAGAGGG 62.201 65.000 34.66 34.66 40.58 4.30
2942 3203 1.210413 CTCCGTCACACGTGAGAGG 59.790 63.158 25.01 23.93 40.58 3.69
2943 3204 0.591659 TTCTCCGTCACACGTGAGAG 59.408 55.000 25.01 17.87 43.38 3.20
2944 3205 0.591659 CTTCTCCGTCACACGTGAGA 59.408 55.000 25.01 18.14 42.08 3.27
2945 3206 0.591659 TCTTCTCCGTCACACGTGAG 59.408 55.000 25.01 15.63 40.58 3.51
2946 3207 0.309922 GTCTTCTCCGTCACACGTGA 59.690 55.000 25.01 0.00 40.58 4.35
2947 3208 0.030235 TGTCTTCTCCGTCACACGTG 59.970 55.000 15.48 15.48 40.58 4.49
2948 3209 0.742505 TTGTCTTCTCCGTCACACGT 59.257 50.000 0.00 0.00 40.58 4.49
2949 3210 1.269102 ACTTGTCTTCTCCGTCACACG 60.269 52.381 0.00 0.00 42.11 4.49
2950 3211 2.223735 TGACTTGTCTTCTCCGTCACAC 60.224 50.000 2.35 0.00 30.41 3.82
2951 3212 2.028876 TGACTTGTCTTCTCCGTCACA 58.971 47.619 2.35 0.00 30.41 3.58
2952 3213 2.795175 TGACTTGTCTTCTCCGTCAC 57.205 50.000 2.35 0.00 30.41 3.67
2953 3214 2.429250 TGTTGACTTGTCTTCTCCGTCA 59.571 45.455 2.35 0.00 33.25 4.35
2954 3215 2.795470 GTGTTGACTTGTCTTCTCCGTC 59.205 50.000 2.35 0.00 0.00 4.79
2955 3216 2.798499 CGTGTTGACTTGTCTTCTCCGT 60.798 50.000 2.35 0.00 0.00 4.69
2956 3217 1.787155 CGTGTTGACTTGTCTTCTCCG 59.213 52.381 2.35 0.00 0.00 4.63
2957 3218 2.540101 CACGTGTTGACTTGTCTTCTCC 59.460 50.000 7.58 0.00 0.00 3.71
2958 3219 2.033662 GCACGTGTTGACTTGTCTTCTC 60.034 50.000 18.38 0.00 0.00 2.87
2959 3220 1.933853 GCACGTGTTGACTTGTCTTCT 59.066 47.619 18.38 0.00 0.00 2.85
2960 3221 1.663643 TGCACGTGTTGACTTGTCTTC 59.336 47.619 18.38 0.00 0.00 2.87
2961 3222 1.732941 TGCACGTGTTGACTTGTCTT 58.267 45.000 18.38 0.00 0.00 3.01
2962 3223 1.396996 GTTGCACGTGTTGACTTGTCT 59.603 47.619 18.38 0.00 0.00 3.41
2963 3224 1.396996 AGTTGCACGTGTTGACTTGTC 59.603 47.619 18.38 0.00 0.00 3.18
2964 3225 1.130373 CAGTTGCACGTGTTGACTTGT 59.870 47.619 18.38 0.00 0.00 3.16
2965 3226 1.531677 CCAGTTGCACGTGTTGACTTG 60.532 52.381 18.38 10.41 0.00 3.16
2966 3227 0.732571 CCAGTTGCACGTGTTGACTT 59.267 50.000 18.38 0.00 0.00 3.01
2967 3228 0.107897 TCCAGTTGCACGTGTTGACT 60.108 50.000 18.38 14.97 0.00 3.41
2968 3229 0.730265 TTCCAGTTGCACGTGTTGAC 59.270 50.000 18.38 12.97 0.00 3.18
2969 3230 1.013596 CTTCCAGTTGCACGTGTTGA 58.986 50.000 18.38 0.13 0.00 3.18
2970 3231 1.003545 CTCTTCCAGTTGCACGTGTTG 60.004 52.381 18.38 10.46 0.00 3.33
2971 3232 1.134521 TCTCTTCCAGTTGCACGTGTT 60.135 47.619 18.38 0.00 0.00 3.32
2972 3233 0.464036 TCTCTTCCAGTTGCACGTGT 59.536 50.000 18.38 0.00 0.00 4.49
2973 3234 1.143305 CTCTCTTCCAGTTGCACGTG 58.857 55.000 12.28 12.28 0.00 4.49
2974 3235 0.601311 GCTCTCTTCCAGTTGCACGT 60.601 55.000 0.00 0.00 0.00 4.49
2975 3236 1.621301 CGCTCTCTTCCAGTTGCACG 61.621 60.000 0.00 0.00 0.00 5.34
2976 3237 0.319900 TCGCTCTCTTCCAGTTGCAC 60.320 55.000 0.00 0.00 0.00 4.57
2977 3238 0.319900 GTCGCTCTCTTCCAGTTGCA 60.320 55.000 0.00 0.00 0.00 4.08
2978 3239 1.347817 CGTCGCTCTCTTCCAGTTGC 61.348 60.000 0.00 0.00 0.00 4.17
2979 3240 0.734253 CCGTCGCTCTCTTCCAGTTG 60.734 60.000 0.00 0.00 0.00 3.16
2980 3241 1.587054 CCGTCGCTCTCTTCCAGTT 59.413 57.895 0.00 0.00 0.00 3.16
2981 3242 2.995872 GCCGTCGCTCTCTTCCAGT 61.996 63.158 0.00 0.00 0.00 4.00
2982 3243 2.202676 GCCGTCGCTCTCTTCCAG 60.203 66.667 0.00 0.00 0.00 3.86
2983 3244 4.116328 CGCCGTCGCTCTCTTCCA 62.116 66.667 0.00 0.00 0.00 3.53
3003 3264 1.840741 CTGAGTCATACGCGAGTTTCG 59.159 52.381 15.93 0.00 46.40 3.46
3004 3265 2.159421 TCCTGAGTCATACGCGAGTTTC 60.159 50.000 15.93 3.04 46.40 2.78
3005 3266 1.816835 TCCTGAGTCATACGCGAGTTT 59.183 47.619 15.93 0.00 46.40 2.66
3006 3267 1.402259 CTCCTGAGTCATACGCGAGTT 59.598 52.381 15.93 0.00 46.40 3.01
3008 3269 0.309302 CCTCCTGAGTCATACGCGAG 59.691 60.000 15.93 1.66 0.00 5.03
3009 3270 1.725557 GCCTCCTGAGTCATACGCGA 61.726 60.000 15.93 0.00 0.00 5.87
3010 3271 1.299468 GCCTCCTGAGTCATACGCG 60.299 63.158 3.53 3.53 0.00 6.01
3011 3272 1.068250 GGCCTCCTGAGTCATACGC 59.932 63.158 0.00 0.00 0.00 4.42
3012 3273 0.671251 GAGGCCTCCTGAGTCATACG 59.329 60.000 23.19 0.00 31.76 3.06
3013 3274 2.080654 AGAGGCCTCCTGAGTCATAC 57.919 55.000 29.54 0.00 31.76 2.39
3014 3275 2.487445 CGTAGAGGCCTCCTGAGTCATA 60.487 54.545 29.54 9.57 31.76 2.15
3015 3276 1.752436 CGTAGAGGCCTCCTGAGTCAT 60.752 57.143 29.54 10.66 31.76 3.06
3016 3277 0.394488 CGTAGAGGCCTCCTGAGTCA 60.394 60.000 29.54 3.09 31.76 3.41
3017 3278 0.394625 ACGTAGAGGCCTCCTGAGTC 60.395 60.000 29.54 11.91 31.76 3.36
3018 3279 0.681564 CACGTAGAGGCCTCCTGAGT 60.682 60.000 29.54 20.17 31.76 3.41
3019 3280 1.388065 CCACGTAGAGGCCTCCTGAG 61.388 65.000 29.54 19.52 31.76 3.35
3020 3281 1.379977 CCACGTAGAGGCCTCCTGA 60.380 63.158 29.54 12.41 31.76 3.86
3021 3282 1.379977 TCCACGTAGAGGCCTCCTG 60.380 63.158 29.54 20.56 38.46 3.86
3022 3283 1.380112 GTCCACGTAGAGGCCTCCT 60.380 63.158 29.54 18.26 38.46 3.69
3023 3284 1.681327 TGTCCACGTAGAGGCCTCC 60.681 63.158 29.54 14.03 38.46 4.30
3024 3285 1.248785 TGTGTCCACGTAGAGGCCTC 61.249 60.000 26.22 26.22 38.46 4.70
3025 3286 0.830444 TTGTGTCCACGTAGAGGCCT 60.830 55.000 3.86 3.86 38.46 5.19
3026 3287 0.034337 TTTGTGTCCACGTAGAGGCC 59.966 55.000 0.00 0.00 38.46 5.19
3027 3288 1.429463 CTTTGTGTCCACGTAGAGGC 58.571 55.000 0.00 0.00 38.46 4.70
3028 3289 1.337823 CCCTTTGTGTCCACGTAGAGG 60.338 57.143 0.00 0.00 40.53 3.69
3029 3290 1.337823 CCCCTTTGTGTCCACGTAGAG 60.338 57.143 0.00 0.00 0.00 2.43
3030 3291 0.682852 CCCCTTTGTGTCCACGTAGA 59.317 55.000 0.00 0.00 0.00 2.59
3031 3292 0.321298 CCCCCTTTGTGTCCACGTAG 60.321 60.000 0.00 0.00 0.00 3.51
3032 3293 1.756024 CCCCCTTTGTGTCCACGTA 59.244 57.895 0.00 0.00 0.00 3.57
3033 3294 2.513895 CCCCCTTTGTGTCCACGT 59.486 61.111 0.00 0.00 0.00 4.49
3047 3308 5.351948 TTTAAAAATTGCTGATAGCCCCC 57.648 39.130 0.00 0.00 41.51 5.40
3048 3309 8.956533 TTTATTTAAAAATTGCTGATAGCCCC 57.043 30.769 0.00 0.00 41.51 5.80
3060 3321 9.392021 CTGGTTTGCGCAATTTATTTAAAAATT 57.608 25.926 25.64 0.00 39.14 1.82
3061 3322 8.020244 CCTGGTTTGCGCAATTTATTTAAAAAT 58.980 29.630 25.64 0.00 0.00 1.82
3062 3323 7.226720 TCCTGGTTTGCGCAATTTATTTAAAAA 59.773 29.630 25.64 0.36 0.00 1.94
3063 3324 6.706270 TCCTGGTTTGCGCAATTTATTTAAAA 59.294 30.769 25.64 0.97 0.00 1.52
3064 3325 6.146347 GTCCTGGTTTGCGCAATTTATTTAAA 59.854 34.615 25.64 1.84 0.00 1.52
3065 3326 5.635700 GTCCTGGTTTGCGCAATTTATTTAA 59.364 36.000 25.64 2.70 0.00 1.52
3066 3327 5.047660 AGTCCTGGTTTGCGCAATTTATTTA 60.048 36.000 25.64 3.58 0.00 1.40
3067 3328 3.993736 GTCCTGGTTTGCGCAATTTATTT 59.006 39.130 25.64 0.00 0.00 1.40
3068 3329 3.258123 AGTCCTGGTTTGCGCAATTTATT 59.742 39.130 25.64 2.44 0.00 1.40
3069 3330 2.825532 AGTCCTGGTTTGCGCAATTTAT 59.174 40.909 25.64 2.07 0.00 1.40
3070 3331 2.235016 AGTCCTGGTTTGCGCAATTTA 58.765 42.857 25.64 6.23 0.00 1.40
3071 3332 1.039856 AGTCCTGGTTTGCGCAATTT 58.960 45.000 25.64 0.69 0.00 1.82
3072 3333 1.039856 AAGTCCTGGTTTGCGCAATT 58.960 45.000 25.64 9.71 0.00 2.32
3073 3334 0.314935 CAAGTCCTGGTTTGCGCAAT 59.685 50.000 25.64 2.70 0.00 3.56
3074 3335 0.749818 TCAAGTCCTGGTTTGCGCAA 60.750 50.000 21.02 21.02 0.00 4.85
3075 3336 0.749818 TTCAAGTCCTGGTTTGCGCA 60.750 50.000 5.66 5.66 0.00 6.09
3076 3337 0.317854 GTTCAAGTCCTGGTTTGCGC 60.318 55.000 0.00 0.00 0.00 6.09
3077 3338 1.264288 GAGTTCAAGTCCTGGTTTGCG 59.736 52.381 8.25 0.00 0.00 4.85
3078 3339 2.297701 TGAGTTCAAGTCCTGGTTTGC 58.702 47.619 8.25 0.00 0.00 3.68
3079 3340 4.558538 CTTGAGTTCAAGTCCTGGTTTG 57.441 45.455 12.61 0.53 46.11 2.93
3090 3351 4.588951 TCAGAGCTAAGGTCTTGAGTTCAA 59.411 41.667 0.00 0.00 38.40 2.69
3091 3352 4.152647 TCAGAGCTAAGGTCTTGAGTTCA 58.847 43.478 0.00 0.00 38.40 3.18
3092 3353 4.792521 TCAGAGCTAAGGTCTTGAGTTC 57.207 45.455 0.00 0.00 38.40 3.01
3093 3354 5.128008 GGTATCAGAGCTAAGGTCTTGAGTT 59.872 44.000 0.00 0.00 38.40 3.01
3094 3355 4.647399 GGTATCAGAGCTAAGGTCTTGAGT 59.353 45.833 0.00 0.00 38.40 3.41
3095 3356 4.646945 TGGTATCAGAGCTAAGGTCTTGAG 59.353 45.833 0.00 0.00 38.40 3.02
3096 3357 4.610333 TGGTATCAGAGCTAAGGTCTTGA 58.390 43.478 0.00 0.00 38.40 3.02
3097 3358 5.163364 ACATGGTATCAGAGCTAAGGTCTTG 60.163 44.000 0.00 0.00 38.40 3.02
3098 3359 4.965532 ACATGGTATCAGAGCTAAGGTCTT 59.034 41.667 0.00 0.00 38.40 3.01
3099 3360 4.551671 ACATGGTATCAGAGCTAAGGTCT 58.448 43.478 0.00 0.00 41.33 3.85
3100 3361 4.946478 ACATGGTATCAGAGCTAAGGTC 57.054 45.455 0.00 0.00 0.00 3.85
3101 3362 6.686632 GCTTAACATGGTATCAGAGCTAAGGT 60.687 42.308 5.14 0.00 0.00 3.50
3102 3363 5.698545 GCTTAACATGGTATCAGAGCTAAGG 59.301 44.000 5.14 0.00 0.00 2.69
3103 3364 6.520272 AGCTTAACATGGTATCAGAGCTAAG 58.480 40.000 12.07 0.00 37.45 2.18
3104 3365 6.485830 AGCTTAACATGGTATCAGAGCTAA 57.514 37.500 12.07 0.00 37.45 3.09
3105 3366 6.098266 TGAAGCTTAACATGGTATCAGAGCTA 59.902 38.462 13.71 0.00 38.19 3.32
3106 3367 5.104776 TGAAGCTTAACATGGTATCAGAGCT 60.105 40.000 8.58 8.58 40.64 4.09
3107 3368 5.118990 TGAAGCTTAACATGGTATCAGAGC 58.881 41.667 0.00 4.31 0.00 4.09
3108 3369 6.293298 GCATGAAGCTTAACATGGTATCAGAG 60.293 42.308 22.64 3.88 42.53 3.35
3109 3370 5.528690 GCATGAAGCTTAACATGGTATCAGA 59.471 40.000 22.64 0.00 42.53 3.27
3110 3371 5.297527 TGCATGAAGCTTAACATGGTATCAG 59.702 40.000 22.64 3.67 45.94 2.90
3111 3372 5.066375 GTGCATGAAGCTTAACATGGTATCA 59.934 40.000 22.64 13.05 45.94 2.15
3112 3373 5.506317 GGTGCATGAAGCTTAACATGGTATC 60.506 44.000 22.64 11.22 45.94 2.24
3113 3374 4.339247 GGTGCATGAAGCTTAACATGGTAT 59.661 41.667 22.64 0.00 45.94 2.73
3114 3375 3.694072 GGTGCATGAAGCTTAACATGGTA 59.306 43.478 22.64 0.00 45.94 3.25
3115 3376 2.493278 GGTGCATGAAGCTTAACATGGT 59.507 45.455 22.64 0.00 45.94 3.55
3116 3377 2.492881 TGGTGCATGAAGCTTAACATGG 59.507 45.455 22.64 10.07 45.94 3.66
3117 3378 3.766151 CTGGTGCATGAAGCTTAACATG 58.234 45.455 19.04 19.04 45.94 3.21
3118 3379 2.165030 GCTGGTGCATGAAGCTTAACAT 59.835 45.455 4.14 0.00 45.94 2.71
3119 3380 1.541147 GCTGGTGCATGAAGCTTAACA 59.459 47.619 4.14 0.00 45.94 2.41
3120 3381 1.135286 GGCTGGTGCATGAAGCTTAAC 60.135 52.381 15.20 0.00 45.94 2.01
3121 3382 1.176527 GGCTGGTGCATGAAGCTTAA 58.823 50.000 15.20 0.00 45.94 1.85
3122 3383 0.038021 TGGCTGGTGCATGAAGCTTA 59.962 50.000 15.20 5.38 45.94 3.09
3123 3384 0.828762 TTGGCTGGTGCATGAAGCTT 60.829 50.000 15.20 0.00 45.94 3.74
3124 3385 1.228644 TTGGCTGGTGCATGAAGCT 60.229 52.632 15.20 0.00 45.94 3.74
3125 3386 1.080298 GTTGGCTGGTGCATGAAGC 60.080 57.895 0.00 9.13 45.96 3.86
3126 3387 1.210931 CGTTGGCTGGTGCATGAAG 59.789 57.895 0.00 0.00 41.91 3.02
3127 3388 2.918345 GCGTTGGCTGGTGCATGAA 61.918 57.895 0.00 0.00 41.91 2.57
3128 3389 3.364441 GCGTTGGCTGGTGCATGA 61.364 61.111 0.00 0.00 41.91 3.07
3129 3390 3.210223 TTGCGTTGGCTGGTGCATG 62.210 57.895 0.00 0.00 41.91 4.06
3130 3391 2.911509 TTGCGTTGGCTGGTGCAT 60.912 55.556 0.00 0.00 41.91 3.96
3131 3392 3.898509 GTTGCGTTGGCTGGTGCA 61.899 61.111 0.00 0.00 41.91 4.57
3132 3393 4.645921 GGTTGCGTTGGCTGGTGC 62.646 66.667 0.00 0.00 40.82 5.01
3133 3394 2.290122 TTTGGTTGCGTTGGCTGGTG 62.290 55.000 0.00 0.00 40.82 4.17
3134 3395 1.608717 TTTTGGTTGCGTTGGCTGGT 61.609 50.000 0.00 0.00 40.82 4.00
3135 3396 0.875474 CTTTTGGTTGCGTTGGCTGG 60.875 55.000 0.00 0.00 40.82 4.85
3136 3397 0.179113 ACTTTTGGTTGCGTTGGCTG 60.179 50.000 0.00 0.00 40.82 4.85
3137 3398 0.102300 GACTTTTGGTTGCGTTGGCT 59.898 50.000 0.00 0.00 40.82 4.75
3138 3399 0.874175 GGACTTTTGGTTGCGTTGGC 60.874 55.000 0.00 0.00 40.52 4.52
3139 3400 0.457851 TGGACTTTTGGTTGCGTTGG 59.542 50.000 0.00 0.00 0.00 3.77
3140 3401 2.285827 TTGGACTTTTGGTTGCGTTG 57.714 45.000 0.00 0.00 0.00 4.10
3141 3402 2.232696 AGTTTGGACTTTTGGTTGCGTT 59.767 40.909 0.00 0.00 29.87 4.84
3142 3403 1.822371 AGTTTGGACTTTTGGTTGCGT 59.178 42.857 0.00 0.00 29.87 5.24
3143 3404 2.159310 TCAGTTTGGACTTTTGGTTGCG 60.159 45.455 0.00 0.00 32.54 4.85
3144 3405 3.518634 TCAGTTTGGACTTTTGGTTGC 57.481 42.857 0.00 0.00 32.54 4.17
3145 3406 4.099266 TCCATCAGTTTGGACTTTTGGTTG 59.901 41.667 0.00 0.00 40.90 3.77
3146 3407 4.285863 TCCATCAGTTTGGACTTTTGGTT 58.714 39.130 0.00 0.00 40.90 3.67
3147 3408 3.909732 TCCATCAGTTTGGACTTTTGGT 58.090 40.909 0.00 0.00 40.90 3.67
3148 3409 4.935352 TTCCATCAGTTTGGACTTTTGG 57.065 40.909 0.00 0.00 45.42 3.28
3149 3410 5.291971 CCTTTCCATCAGTTTGGACTTTTG 58.708 41.667 0.00 0.00 45.42 2.44
3150 3411 4.344968 CCCTTTCCATCAGTTTGGACTTTT 59.655 41.667 0.00 0.00 45.42 2.27
3151 3412 3.897505 CCCTTTCCATCAGTTTGGACTTT 59.102 43.478 0.00 0.00 45.42 2.66
3152 3413 3.500343 CCCTTTCCATCAGTTTGGACTT 58.500 45.455 0.00 0.00 45.42 3.01
3153 3414 2.819348 GCCCTTTCCATCAGTTTGGACT 60.819 50.000 0.00 0.00 45.42 3.85
3154 3415 1.546029 GCCCTTTCCATCAGTTTGGAC 59.454 52.381 0.00 0.00 45.42 4.02
3155 3416 1.428912 AGCCCTTTCCATCAGTTTGGA 59.571 47.619 0.00 0.00 44.08 3.53
3156 3417 1.928868 AGCCCTTTCCATCAGTTTGG 58.071 50.000 0.00 0.00 38.18 3.28
3157 3418 3.690460 ACTAGCCCTTTCCATCAGTTTG 58.310 45.455 0.00 0.00 0.00 2.93
3158 3419 4.288626 TGTACTAGCCCTTTCCATCAGTTT 59.711 41.667 0.00 0.00 0.00 2.66
3159 3420 3.844211 TGTACTAGCCCTTTCCATCAGTT 59.156 43.478 0.00 0.00 0.00 3.16
3160 3421 3.450904 TGTACTAGCCCTTTCCATCAGT 58.549 45.455 0.00 0.00 0.00 3.41
3161 3422 4.487714 TTGTACTAGCCCTTTCCATCAG 57.512 45.455 0.00 0.00 0.00 2.90
3162 3423 4.141482 GGATTGTACTAGCCCTTTCCATCA 60.141 45.833 0.00 0.00 0.00 3.07
3163 3424 4.141482 TGGATTGTACTAGCCCTTTCCATC 60.141 45.833 9.13 0.00 0.00 3.51
3164 3425 3.785887 TGGATTGTACTAGCCCTTTCCAT 59.214 43.478 9.13 0.00 0.00 3.41
3165 3426 3.054655 GTGGATTGTACTAGCCCTTTCCA 60.055 47.826 9.13 0.42 0.00 3.53
3166 3427 3.054655 TGTGGATTGTACTAGCCCTTTCC 60.055 47.826 9.13 0.00 0.00 3.13
3167 3428 4.216411 TGTGGATTGTACTAGCCCTTTC 57.784 45.455 9.13 0.00 0.00 2.62
3168 3429 4.862641 ATGTGGATTGTACTAGCCCTTT 57.137 40.909 9.13 0.00 0.00 3.11
3169 3430 6.787957 AGTATATGTGGATTGTACTAGCCCTT 59.212 38.462 9.13 2.39 0.00 3.95
3170 3431 6.211584 CAGTATATGTGGATTGTACTAGCCCT 59.788 42.308 9.13 0.00 0.00 5.19
3171 3432 6.014499 ACAGTATATGTGGATTGTACTAGCCC 60.014 42.308 9.13 1.71 41.91 5.19
3172 3433 6.994221 ACAGTATATGTGGATTGTACTAGCC 58.006 40.000 4.54 4.54 41.91 3.93
3173 3434 9.408069 GTTACAGTATATGTGGATTGTACTAGC 57.592 37.037 0.00 0.00 43.80 3.42
3178 3439 9.945904 TGTTTGTTACAGTATATGTGGATTGTA 57.054 29.630 0.00 0.00 43.80 2.41
3179 3440 8.856153 TGTTTGTTACAGTATATGTGGATTGT 57.144 30.769 0.00 0.00 43.80 2.71
3194 3455 3.568007 GCTTGGTGGATCTGTTTGTTACA 59.432 43.478 0.00 0.00 34.95 2.41
3195 3456 3.568007 TGCTTGGTGGATCTGTTTGTTAC 59.432 43.478 0.00 0.00 0.00 2.50
3196 3457 3.826524 TGCTTGGTGGATCTGTTTGTTA 58.173 40.909 0.00 0.00 0.00 2.41
3197 3458 2.665165 TGCTTGGTGGATCTGTTTGTT 58.335 42.857 0.00 0.00 0.00 2.83
3198 3459 2.363306 TGCTTGGTGGATCTGTTTGT 57.637 45.000 0.00 0.00 0.00 2.83
3199 3460 3.383761 GTTTGCTTGGTGGATCTGTTTG 58.616 45.455 0.00 0.00 0.00 2.93
3200 3461 2.365293 GGTTTGCTTGGTGGATCTGTTT 59.635 45.455 0.00 0.00 0.00 2.83
3201 3462 1.963515 GGTTTGCTTGGTGGATCTGTT 59.036 47.619 0.00 0.00 0.00 3.16
3316 3577 9.765795 CGGATCCTTTATAGTGAATTTAGACTT 57.234 33.333 10.75 0.00 0.00 3.01
3317 3578 9.144298 TCGGATCCTTTATAGTGAATTTAGACT 57.856 33.333 10.75 0.00 0.00 3.24
3342 3603 6.408858 TCTCGAAAATACATTCAGTGCTTC 57.591 37.500 0.00 0.00 0.00 3.86
3361 6927 7.954248 CCGAAGATTTGCATATTCTATTTCTCG 59.046 37.037 0.00 0.00 29.64 4.04
3362 6928 8.778358 ACCGAAGATTTGCATATTCTATTTCTC 58.222 33.333 0.00 0.00 29.64 2.87
3386 6952 0.032540 CAAAGCAAGGCACTGGAACC 59.967 55.000 0.00 0.00 40.86 3.62
3395 6961 1.588597 GGAAGAGGCAAAGCAAGGC 59.411 57.895 0.00 0.00 0.00 4.35
3397 6963 1.878775 CGGGAAGAGGCAAAGCAAG 59.121 57.895 0.00 0.00 0.00 4.01
3415 6981 0.595095 CTGCTCTGGTCTTTGTTGGC 59.405 55.000 0.00 0.00 0.00 4.52
3416 6982 2.260844 TCTGCTCTGGTCTTTGTTGG 57.739 50.000 0.00 0.00 0.00 3.77
3425 6991 0.694771 TGCTTTGGATCTGCTCTGGT 59.305 50.000 0.00 0.00 0.00 4.00
3427 6993 2.110901 AGTGCTTTGGATCTGCTCTG 57.889 50.000 0.00 0.00 0.00 3.35
3428 6994 2.417924 CGTAGTGCTTTGGATCTGCTCT 60.418 50.000 0.00 2.18 35.26 4.09
3429 6995 1.929836 CGTAGTGCTTTGGATCTGCTC 59.070 52.381 0.00 0.00 0.00 4.26
3466 7032 4.099573 CGGAAGAAGTACCTATGTGTGGAT 59.900 45.833 0.00 0.00 0.00 3.41
3467 7033 3.446161 CGGAAGAAGTACCTATGTGTGGA 59.554 47.826 0.00 0.00 0.00 4.02
3468 7034 3.194968 ACGGAAGAAGTACCTATGTGTGG 59.805 47.826 0.00 0.00 0.00 4.17
3469 7035 4.451629 ACGGAAGAAGTACCTATGTGTG 57.548 45.455 0.00 0.00 0.00 3.82
3482 7049 5.469421 TGCGGAGTAAATAAAAACGGAAGAA 59.531 36.000 0.00 0.00 0.00 2.52
3483 7050 4.996122 TGCGGAGTAAATAAAAACGGAAGA 59.004 37.500 0.00 0.00 0.00 2.87
3484 7051 5.285798 TGCGGAGTAAATAAAAACGGAAG 57.714 39.130 0.00 0.00 0.00 3.46
3485 7052 5.883503 ATGCGGAGTAAATAAAAACGGAA 57.116 34.783 0.00 0.00 0.00 4.30
3486 7053 7.556733 AATATGCGGAGTAAATAAAAACGGA 57.443 32.000 0.00 0.00 0.00 4.69
3487 7054 8.767085 TCTAATATGCGGAGTAAATAAAAACGG 58.233 33.333 0.00 0.00 0.00 4.44
3488 7055 9.793245 CTCTAATATGCGGAGTAAATAAAAACG 57.207 33.333 0.00 0.00 0.00 3.60
3493 7060 9.472361 GTCAACTCTAATATGCGGAGTAAATAA 57.528 33.333 6.10 0.00 39.09 1.40
3494 7061 8.635328 TGTCAACTCTAATATGCGGAGTAAATA 58.365 33.333 6.10 0.00 39.09 1.40
3495 7062 7.497595 TGTCAACTCTAATATGCGGAGTAAAT 58.502 34.615 6.10 0.00 39.09 1.40
3496 7063 6.869695 TGTCAACTCTAATATGCGGAGTAAA 58.130 36.000 6.10 0.00 39.09 2.01
3497 7064 6.459670 TGTCAACTCTAATATGCGGAGTAA 57.540 37.500 6.10 0.00 39.09 2.24
3498 7065 6.459670 TTGTCAACTCTAATATGCGGAGTA 57.540 37.500 6.10 0.00 39.09 2.59
3499 7066 5.339008 TTGTCAACTCTAATATGCGGAGT 57.661 39.130 0.00 0.00 41.37 3.85
3500 7067 6.851222 ATTTGTCAACTCTAATATGCGGAG 57.149 37.500 0.00 0.00 0.00 4.63
3606 7173 6.253512 GTCAAGCTTTGTAAACTTTGACCAAG 59.746 38.462 0.00 0.00 38.64 3.61
3607 7174 6.071616 AGTCAAGCTTTGTAAACTTTGACCAA 60.072 34.615 17.07 0.00 0.00 3.67
3608 7175 5.417580 AGTCAAGCTTTGTAAACTTTGACCA 59.582 36.000 17.07 0.00 0.00 4.02
3609 7176 5.891451 AGTCAAGCTTTGTAAACTTTGACC 58.109 37.500 17.07 7.41 0.00 4.02
3610 7177 7.812309 AAAGTCAAGCTTTGTAAACTTTGAC 57.188 32.000 14.76 14.88 45.00 3.18
3632 7199 5.945784 AGTCTGCATATTAGCTTTGGTCAAA 59.054 36.000 0.00 0.00 34.99 2.69
3633 7200 5.500234 AGTCTGCATATTAGCTTTGGTCAA 58.500 37.500 0.00 0.00 34.99 3.18
3634 7201 5.102953 AGTCTGCATATTAGCTTTGGTCA 57.897 39.130 0.00 0.00 34.99 4.02
3635 7202 7.553881 TTTAGTCTGCATATTAGCTTTGGTC 57.446 36.000 0.00 0.00 34.99 4.02
3636 7203 9.627123 TTATTTAGTCTGCATATTAGCTTTGGT 57.373 29.630 0.00 0.00 34.99 3.67
3646 7213 9.082313 CCCTCCATTTTTATTTAGTCTGCATAT 57.918 33.333 0.00 0.00 0.00 1.78
3647 7214 8.278639 TCCCTCCATTTTTATTTAGTCTGCATA 58.721 33.333 0.00 0.00 0.00 3.14
3648 7215 7.125391 TCCCTCCATTTTTATTTAGTCTGCAT 58.875 34.615 0.00 0.00 0.00 3.96
3649 7216 6.489603 TCCCTCCATTTTTATTTAGTCTGCA 58.510 36.000 0.00 0.00 0.00 4.41
3650 7217 6.603599 ACTCCCTCCATTTTTATTTAGTCTGC 59.396 38.462 0.00 0.00 0.00 4.26
3651 7218 9.110502 GTACTCCCTCCATTTTTATTTAGTCTG 57.889 37.037 0.00 0.00 0.00 3.51
3652 7219 8.832735 TGTACTCCCTCCATTTTTATTTAGTCT 58.167 33.333 0.00 0.00 0.00 3.24
3653 7220 9.457436 TTGTACTCCCTCCATTTTTATTTAGTC 57.543 33.333 0.00 0.00 0.00 2.59
3654 7221 9.239551 GTTGTACTCCCTCCATTTTTATTTAGT 57.760 33.333 0.00 0.00 0.00 2.24
3655 7222 9.238368 TGTTGTACTCCCTCCATTTTTATTTAG 57.762 33.333 0.00 0.00 0.00 1.85
3656 7223 9.589461 TTGTTGTACTCCCTCCATTTTTATTTA 57.411 29.630 0.00 0.00 0.00 1.40
3657 7224 8.485578 TTGTTGTACTCCCTCCATTTTTATTT 57.514 30.769 0.00 0.00 0.00 1.40
3658 7225 8.664669 ATTGTTGTACTCCCTCCATTTTTATT 57.335 30.769 0.00 0.00 0.00 1.40
3659 7226 9.408648 CTATTGTTGTACTCCCTCCATTTTTAT 57.591 33.333 0.00 0.00 0.00 1.40
3660 7227 8.387813 ACTATTGTTGTACTCCCTCCATTTTTA 58.612 33.333 0.00 0.00 0.00 1.52
3661 7228 7.238710 ACTATTGTTGTACTCCCTCCATTTTT 58.761 34.615 0.00 0.00 0.00 1.94
3662 7229 6.790319 ACTATTGTTGTACTCCCTCCATTTT 58.210 36.000 0.00 0.00 0.00 1.82
3663 7230 6.388619 ACTATTGTTGTACTCCCTCCATTT 57.611 37.500 0.00 0.00 0.00 2.32
3664 7231 6.126854 GGTACTATTGTTGTACTCCCTCCATT 60.127 42.308 0.00 0.00 39.89 3.16
3665 7232 5.365895 GGTACTATTGTTGTACTCCCTCCAT 59.634 44.000 0.00 0.00 39.89 3.41
3666 7233 4.713321 GGTACTATTGTTGTACTCCCTCCA 59.287 45.833 0.00 0.00 39.89 3.86
3667 7234 4.961099 AGGTACTATTGTTGTACTCCCTCC 59.039 45.833 0.00 0.00 39.89 4.30
3668 7235 7.651027 TTAGGTACTATTGTTGTACTCCCTC 57.349 40.000 0.00 0.00 42.38 4.30
3669 7236 7.014038 CGATTAGGTACTATTGTTGTACTCCCT 59.986 40.741 0.00 0.00 42.38 4.20
3670 7237 7.013655 TCGATTAGGTACTATTGTTGTACTCCC 59.986 40.741 0.00 0.00 42.38 4.30
3671 7238 7.934457 TCGATTAGGTACTATTGTTGTACTCC 58.066 38.462 0.00 0.00 42.38 3.85
3672 7239 9.962783 AATCGATTAGGTACTATTGTTGTACTC 57.037 33.333 9.39 0.00 42.38 2.59
3704 7271 4.599047 AGGAGTCAGTTTCAGACTTGAG 57.401 45.455 0.00 0.00 45.79 3.02
3706 7273 5.010112 TGAGTAGGAGTCAGTTTCAGACTTG 59.990 44.000 0.00 0.00 45.79 3.16
3707 7274 5.141182 TGAGTAGGAGTCAGTTTCAGACTT 58.859 41.667 0.00 0.00 45.79 3.01
3709 7276 5.010213 AGTTGAGTAGGAGTCAGTTTCAGAC 59.990 44.000 0.00 0.00 36.26 3.51
3710 7277 5.141182 AGTTGAGTAGGAGTCAGTTTCAGA 58.859 41.667 0.00 0.00 0.00 3.27
3711 7278 5.461032 AGTTGAGTAGGAGTCAGTTTCAG 57.539 43.478 0.00 0.00 0.00 3.02
3712 7279 6.069331 ACTAGTTGAGTAGGAGTCAGTTTCA 58.931 40.000 0.00 0.00 36.27 2.69
3713 7280 6.578163 ACTAGTTGAGTAGGAGTCAGTTTC 57.422 41.667 0.00 0.00 36.27 2.78
3714 7281 6.980416 AACTAGTTGAGTAGGAGTCAGTTT 57.020 37.500 7.48 0.00 37.44 2.66
3715 7282 7.460071 TCTAACTAGTTGAGTAGGAGTCAGTT 58.540 38.462 18.56 0.00 37.44 3.16
3716 7283 7.018487 TCTAACTAGTTGAGTAGGAGTCAGT 57.982 40.000 18.56 0.00 37.44 3.41
3717 7284 7.107542 ACTCTAACTAGTTGAGTAGGAGTCAG 58.892 42.308 25.94 11.25 41.94 3.51
3718 7285 7.018487 ACTCTAACTAGTTGAGTAGGAGTCA 57.982 40.000 25.94 3.44 41.94 3.41
3719 7286 7.543947 GACTCTAACTAGTTGAGTAGGAGTC 57.456 44.000 26.61 24.13 46.94 3.36
3720 7287 7.261688 AGACTCTAACTAGTTGAGTAGGAGT 57.738 40.000 26.61 21.88 45.15 3.85
3721 7288 9.669887 TTTAGACTCTAACTAGTTGAGTAGGAG 57.330 37.037 26.61 19.93 40.63 3.69
3725 7292 9.578576 TGGTTTTAGACTCTAACTAGTTGAGTA 57.421 33.333 26.61 16.81 40.63 2.59
3726 7293 8.474710 TGGTTTTAGACTCTAACTAGTTGAGT 57.525 34.615 26.75 26.75 42.87 3.41
3727 7294 9.575783 GATGGTTTTAGACTCTAACTAGTTGAG 57.424 37.037 18.56 21.17 0.00 3.02
3728 7295 8.242053 CGATGGTTTTAGACTCTAACTAGTTGA 58.758 37.037 18.56 11.96 0.00 3.18
3729 7296 7.009357 GCGATGGTTTTAGACTCTAACTAGTTG 59.991 40.741 18.56 8.35 0.00 3.16
3730 7297 7.034397 GCGATGGTTTTAGACTCTAACTAGTT 58.966 38.462 13.68 13.68 0.00 2.24
3731 7298 6.152323 TGCGATGGTTTTAGACTCTAACTAGT 59.848 38.462 0.00 0.00 0.00 2.57
3732 7299 6.472808 GTGCGATGGTTTTAGACTCTAACTAG 59.527 42.308 0.00 0.00 0.00 2.57
3733 7300 6.071784 TGTGCGATGGTTTTAGACTCTAACTA 60.072 38.462 0.00 0.00 0.00 2.24
3734 7301 5.169295 GTGCGATGGTTTTAGACTCTAACT 58.831 41.667 0.00 0.00 0.00 2.24
3735 7302 4.927425 TGTGCGATGGTTTTAGACTCTAAC 59.073 41.667 0.00 0.00 0.00 2.34
3736 7303 5.142061 TGTGCGATGGTTTTAGACTCTAA 57.858 39.130 0.00 0.00 0.00 2.10
3737 7304 4.794278 TGTGCGATGGTTTTAGACTCTA 57.206 40.909 0.00 0.00 0.00 2.43
3738 7305 3.678056 TGTGCGATGGTTTTAGACTCT 57.322 42.857 0.00 0.00 0.00 3.24
3739 7306 4.742438 TTTGTGCGATGGTTTTAGACTC 57.258 40.909 0.00 0.00 0.00 3.36
3740 7307 5.508200 TTTTTGTGCGATGGTTTTAGACT 57.492 34.783 0.00 0.00 0.00 3.24
3762 7329 6.990939 GGTGGTCTTAGACTCTTACTGTTTTT 59.009 38.462 12.41 0.00 32.47 1.94
3763 7330 6.326843 AGGTGGTCTTAGACTCTTACTGTTTT 59.673 38.462 12.41 0.00 32.47 2.43
3764 7331 5.839606 AGGTGGTCTTAGACTCTTACTGTTT 59.160 40.000 12.41 0.00 32.47 2.83
3765 7332 5.395611 AGGTGGTCTTAGACTCTTACTGTT 58.604 41.667 12.41 0.00 32.47 3.16
3766 7333 5.000570 AGGTGGTCTTAGACTCTTACTGT 57.999 43.478 12.41 0.00 32.47 3.55
3767 7334 5.010933 TGAGGTGGTCTTAGACTCTTACTG 58.989 45.833 12.41 0.00 32.47 2.74
3768 7335 5.258216 TGAGGTGGTCTTAGACTCTTACT 57.742 43.478 12.41 4.18 32.47 2.24
3769 7336 5.680151 GCATGAGGTGGTCTTAGACTCTTAC 60.680 48.000 12.41 6.68 32.47 2.34
3770 7337 4.402793 GCATGAGGTGGTCTTAGACTCTTA 59.597 45.833 12.41 5.35 32.47 2.10
3771 7338 3.196685 GCATGAGGTGGTCTTAGACTCTT 59.803 47.826 12.41 2.79 32.47 2.85
3772 7339 2.763448 GCATGAGGTGGTCTTAGACTCT 59.237 50.000 12.41 7.58 32.47 3.24
3773 7340 2.497675 TGCATGAGGTGGTCTTAGACTC 59.502 50.000 12.41 2.56 32.47 3.36
3774 7341 2.540383 TGCATGAGGTGGTCTTAGACT 58.460 47.619 12.41 0.00 32.47 3.24
3775 7342 3.265791 CTTGCATGAGGTGGTCTTAGAC 58.734 50.000 3.36 3.36 0.00 2.59
3776 7343 2.355108 GCTTGCATGAGGTGGTCTTAGA 60.355 50.000 3.33 0.00 0.00 2.10
3777 7344 2.012673 GCTTGCATGAGGTGGTCTTAG 58.987 52.381 3.33 0.00 0.00 2.18
3778 7345 1.340017 GGCTTGCATGAGGTGGTCTTA 60.340 52.381 3.33 0.00 0.00 2.10
3779 7346 0.610232 GGCTTGCATGAGGTGGTCTT 60.610 55.000 3.33 0.00 0.00 3.01
3780 7347 1.001641 GGCTTGCATGAGGTGGTCT 60.002 57.895 3.33 0.00 0.00 3.85
3781 7348 0.895100 TTGGCTTGCATGAGGTGGTC 60.895 55.000 3.33 0.00 0.00 4.02
3782 7349 0.469705 TTTGGCTTGCATGAGGTGGT 60.470 50.000 3.33 0.00 0.00 4.16
3783 7350 0.899720 ATTTGGCTTGCATGAGGTGG 59.100 50.000 3.33 0.00 0.00 4.61
3784 7351 2.480759 GCTATTTGGCTTGCATGAGGTG 60.481 50.000 3.33 0.00 0.00 4.00
3785 7352 1.753073 GCTATTTGGCTTGCATGAGGT 59.247 47.619 3.33 0.00 0.00 3.85
3786 7353 1.068127 GGCTATTTGGCTTGCATGAGG 59.932 52.381 3.33 0.00 38.32 3.86
3787 7354 2.503920 GGCTATTTGGCTTGCATGAG 57.496 50.000 3.33 0.00 38.32 2.90
3796 7363 3.917985 CGTTGTTAAACAGGCTATTTGGC 59.082 43.478 0.00 0.00 42.15 4.52
3797 7364 5.365403 TCGTTGTTAAACAGGCTATTTGG 57.635 39.130 0.00 0.00 35.94 3.28
3798 7365 6.915843 AGTTTCGTTGTTAAACAGGCTATTTG 59.084 34.615 0.00 0.00 38.92 2.32
3799 7366 7.034685 AGTTTCGTTGTTAAACAGGCTATTT 57.965 32.000 0.00 0.00 38.92 1.40
3800 7367 6.628919 AGTTTCGTTGTTAAACAGGCTATT 57.371 33.333 0.00 0.00 38.92 1.73
3801 7368 6.435428 CAAGTTTCGTTGTTAAACAGGCTAT 58.565 36.000 0.00 0.00 38.92 2.97
3802 7369 5.731126 GCAAGTTTCGTTGTTAAACAGGCTA 60.731 40.000 0.00 0.00 38.92 3.93
3803 7370 4.668289 CAAGTTTCGTTGTTAAACAGGCT 58.332 39.130 0.00 0.00 38.92 4.58
3804 7371 3.242016 GCAAGTTTCGTTGTTAAACAGGC 59.758 43.478 0.00 0.00 38.92 4.85
3805 7372 4.264380 GTGCAAGTTTCGTTGTTAAACAGG 59.736 41.667 0.00 0.00 38.92 4.00
3806 7373 4.854291 TGTGCAAGTTTCGTTGTTAAACAG 59.146 37.500 0.00 0.00 38.92 3.16
3807 7374 4.795268 TGTGCAAGTTTCGTTGTTAAACA 58.205 34.783 0.00 0.00 38.92 2.83
3808 7375 5.090083 TCTGTGCAAGTTTCGTTGTTAAAC 58.910 37.500 0.00 0.00 37.14 2.01
3809 7376 5.298197 TCTGTGCAAGTTTCGTTGTTAAA 57.702 34.783 0.00 0.00 0.00 1.52
3810 7377 4.948608 TCTGTGCAAGTTTCGTTGTTAA 57.051 36.364 0.00 0.00 0.00 2.01
3811 7378 4.154375 TGTTCTGTGCAAGTTTCGTTGTTA 59.846 37.500 0.00 0.00 0.00 2.41
3812 7379 3.057876 TGTTCTGTGCAAGTTTCGTTGTT 60.058 39.130 0.00 0.00 0.00 2.83
3813 7380 2.486203 TGTTCTGTGCAAGTTTCGTTGT 59.514 40.909 0.00 0.00 0.00 3.32
3814 7381 2.845967 GTGTTCTGTGCAAGTTTCGTTG 59.154 45.455 0.00 0.00 0.00 4.10
3815 7382 2.475519 CGTGTTCTGTGCAAGTTTCGTT 60.476 45.455 0.00 0.00 0.00 3.85
3816 7383 1.062002 CGTGTTCTGTGCAAGTTTCGT 59.938 47.619 0.00 0.00 0.00 3.85
3817 7384 1.594518 CCGTGTTCTGTGCAAGTTTCG 60.595 52.381 0.00 0.00 0.00 3.46
3818 7385 1.668751 TCCGTGTTCTGTGCAAGTTTC 59.331 47.619 0.00 0.00 0.00 2.78
3819 7386 1.745232 TCCGTGTTCTGTGCAAGTTT 58.255 45.000 0.00 0.00 0.00 2.66
3820 7387 1.745232 TTCCGTGTTCTGTGCAAGTT 58.255 45.000 0.00 0.00 0.00 2.66
3821 7388 1.745232 TTTCCGTGTTCTGTGCAAGT 58.255 45.000 0.00 0.00 0.00 3.16
3822 7389 2.842208 TTTTCCGTGTTCTGTGCAAG 57.158 45.000 0.00 0.00 0.00 4.01
3842 7409 5.453339 CCATGTCCGAGTGTGATAGGTATTT 60.453 44.000 0.00 0.00 0.00 1.40
3887 7454 6.032956 TCTTTGGTTAGATGCTTAGTCGAA 57.967 37.500 0.00 0.00 0.00 3.71
3971 7542 1.210155 GCCTTTGGTAGCTGCAACG 59.790 57.895 3.61 0.00 0.00 4.10
4028 7600 1.883021 GCCGTCAACATCTTTGGGG 59.117 57.895 0.00 0.00 0.00 4.96
4029 7601 1.501741 CGCCGTCAACATCTTTGGG 59.498 57.895 0.00 0.00 0.00 4.12
4085 7666 8.863086 CCATTCCAACCATCAAAATATATGACT 58.137 33.333 0.00 0.00 0.00 3.41
4125 7706 4.651045 TGCAGCTATGGATCTAAGAACAGA 59.349 41.667 0.00 0.00 0.00 3.41
4228 7816 1.682257 GCCCTCTGCACTCCTCTTT 59.318 57.895 0.00 0.00 40.77 2.52
4278 7866 8.143673 TCTTGCTCATCTAGAATAGCCATTAT 57.856 34.615 20.86 0.00 38.99 1.28
4327 7915 3.141398 TCACACCTTGAGCTTTCATCAC 58.859 45.455 0.00 0.00 0.00 3.06
4344 7932 8.678199 CACTTGACTAACACTATCTATCTCACA 58.322 37.037 0.00 0.00 0.00 3.58
4345 7933 8.894731 TCACTTGACTAACACTATCTATCTCAC 58.105 37.037 0.00 0.00 0.00 3.51
5381 8978 3.385755 GGTTAGGTAATCGCCCTTGTAGA 59.614 47.826 0.00 0.00 33.35 2.59
5929 14994 1.004277 GTCAGGAACACTCTCGTGCG 61.004 60.000 0.00 0.00 45.10 5.34
6178 15258 1.858910 TGGGGCCAATCATATCCTTGT 59.141 47.619 4.39 0.00 0.00 3.16
6230 15310 1.153429 GACATCACTGTACCGGCCC 60.153 63.158 0.00 0.00 35.14 5.80
6561 15668 0.466189 AAAATCGAGCGGGCCATCAT 60.466 50.000 4.39 0.00 0.00 2.45
6671 19235 1.603455 CCACACCGGGAGCACAAAT 60.603 57.895 6.32 0.00 0.00 2.32
6712 19276 2.974794 CAGTGGATGATATGGAGGGTCA 59.025 50.000 0.00 0.00 0.00 4.02
6849 19413 2.362397 TCTGGACCTCGCATATGTTCTC 59.638 50.000 4.29 0.00 0.00 2.87
6946 22232 1.206371 GCTTCTTCTTGCCATTGCCAT 59.794 47.619 0.00 0.00 36.33 4.40
7218 25238 0.599991 TGTAGCAACGGAGCACACAG 60.600 55.000 4.18 0.00 36.85 3.66
7287 25319 1.885887 GAGCCACCATAAGCACACAAA 59.114 47.619 0.00 0.00 0.00 2.83
7290 25322 1.339055 TGAGAGCCACCATAAGCACAC 60.339 52.381 0.00 0.00 0.00 3.82
7292 25324 1.373570 GTGAGAGCCACCATAAGCAC 58.626 55.000 0.00 0.00 39.86 4.40
7293 25325 3.861341 GTGAGAGCCACCATAAGCA 57.139 52.632 0.00 0.00 39.86 3.91
7339 25399 1.374758 CCGTCCACAGCAAGTCTCC 60.375 63.158 0.00 0.00 0.00 3.71
7420 25555 1.881973 GCAGCTGTGACAATTCCTCAA 59.118 47.619 16.64 0.00 0.00 3.02
7423 25558 0.403271 AGGCAGCTGTGACAATTCCT 59.597 50.000 16.64 7.52 31.79 3.36
7481 25616 4.157472 TCAAACAATTCACACTCACAAGCA 59.843 37.500 0.00 0.00 0.00 3.91
7697 25846 7.402862 AGGGAAAAGCTGTACATAGTAACATT 58.597 34.615 0.00 0.00 0.00 2.71
7698 25847 6.958767 AGGGAAAAGCTGTACATAGTAACAT 58.041 36.000 0.00 0.00 0.00 2.71
7944 26689 6.789262 AGCATGTGTTCTTCATATACAAAGC 58.211 36.000 0.00 0.00 0.00 3.51
7962 26707 4.265073 GAATCTGTTGGAACCTAGCATGT 58.735 43.478 0.00 0.00 0.00 3.21
7981 26991 5.221864 GGGGAAAACTCATATACCGAGGAAT 60.222 44.000 0.00 0.00 34.66 3.01
8154 27165 7.750947 ACCTTAGATCTGTTATAAGTTGGGT 57.249 36.000 5.18 0.00 0.00 4.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.