Multiple sequence alignment - TraesCS3D01G000400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G000400 chr3D 100.000 2924 0 0 1 2924 358339 355416 0.000000e+00 5400
1 TraesCS3D01G000400 chr3D 99.525 632 3 0 3 634 364575 365206 0.000000e+00 1151
2 TraesCS3D01G000400 chr3D 98.140 645 10 2 1 644 554682534 554681891 0.000000e+00 1123
3 TraesCS3D01G000400 chr3D 83.310 713 98 12 1245 1945 391337 390634 3.180000e-179 638
4 TraesCS3D01G000400 chr3D 96.463 311 11 0 2611 2921 539699192 539699502 5.590000e-142 514
5 TraesCS3D01G000400 chr3D 96.166 313 12 0 2612 2924 10276108 10275796 2.010000e-141 512
6 TraesCS3D01G000400 chr3D 85.830 247 31 3 870 1112 391819 391573 2.890000e-65 259
7 TraesCS3D01G000400 chr3D 77.049 366 54 17 1565 1929 575726541 575726877 1.790000e-42 183
8 TraesCS3D01G000400 chr3A 92.850 1063 55 9 1012 2060 9185697 9186752 0.000000e+00 1522
9 TraesCS3D01G000400 chr3A 83.799 716 104 4 1236 1939 9111470 9112185 0.000000e+00 669
10 TraesCS3D01G000400 chr3A 86.979 192 21 3 1248 1437 711218311 711218500 2.280000e-51 213
11 TraesCS3D01G000400 chr3B 90.638 972 69 8 1095 2060 6126720 6127675 0.000000e+00 1271
12 TraesCS3D01G000400 chr3B 82.479 702 95 22 1236 1933 6118115 6118792 9.030000e-165 590
13 TraesCS3D01G000400 chr3B 86.609 463 57 4 636 1095 6126101 6126561 9.350000e-140 507
14 TraesCS3D01G000400 chr3B 86.087 345 44 3 691 1033 6144721 6145063 4.600000e-98 368
15 TraesCS3D01G000400 chr3B 90.500 200 19 0 870 1069 6117642 6117841 6.210000e-67 265
16 TraesCS3D01G000400 chr3B 85.830 247 31 3 870 1112 5802913 5802667 2.890000e-65 259
17 TraesCS3D01G000400 chr1D 98.915 645 5 2 1 643 460293530 460294174 0.000000e+00 1151
18 TraesCS3D01G000400 chr2D 98.896 634 7 0 1 634 600615048 600615681 0.000000e+00 1133
19 TraesCS3D01G000400 chr2D 98.273 637 8 1 1 637 580790488 580791121 0.000000e+00 1112
20 TraesCS3D01G000400 chr2D 98.107 634 12 0 1 634 580460809 580461442 0.000000e+00 1105
21 TraesCS3D01G000400 chr2D 95.886 316 13 0 2609 2924 487070077 487069762 2.010000e-141 512
22 TraesCS3D01G000400 chr7D 98.273 637 8 2 1 634 227550133 227550769 0.000000e+00 1112
23 TraesCS3D01G000400 chr7D 98.107 634 12 0 1 634 232368649 232368016 0.000000e+00 1105
24 TraesCS3D01G000400 chr7D 96.486 313 11 0 2612 2924 16290759 16290447 4.320000e-143 518
25 TraesCS3D01G000400 chr7D 96.474 312 10 1 2612 2923 115112362 115112672 5.590000e-142 514
26 TraesCS3D01G000400 chr7D 96.178 314 11 1 2612 2924 606104800 606104487 2.010000e-141 512
27 TraesCS3D01G000400 chr4D 98.268 635 10 1 1 634 12092985 12093619 0.000000e+00 1110
28 TraesCS3D01G000400 chr4D 82.337 368 57 5 1562 1925 508431695 508431332 2.190000e-81 313
29 TraesCS3D01G000400 chr4D 90.857 175 16 0 891 1065 508432680 508432506 4.870000e-58 235
30 TraesCS3D01G000400 chr4D 89.143 175 19 0 1273 1447 508432386 508432212 4.910000e-53 219
31 TraesCS3D01G000400 chr6D 95.925 319 10 3 2605 2921 391285121 391285438 5.590000e-142 514
32 TraesCS3D01G000400 chr5D 96.166 313 12 0 2612 2924 42972867 42972555 2.010000e-141 512
33 TraesCS3D01G000400 chrUn 96.166 313 11 1 2612 2924 45706466 45706155 7.230000e-141 510
34 TraesCS3D01G000400 chr4B 82.880 368 58 3 1562 1925 659521367 659521733 2.810000e-85 326
35 TraesCS3D01G000400 chr4B 90.857 175 16 0 891 1065 659520314 659520488 4.870000e-58 235
36 TraesCS3D01G000400 chr4B 86.207 203 26 2 1246 1447 659520584 659520785 4.910000e-53 219
37 TraesCS3D01G000400 chr5A 82.787 366 55 5 1562 1923 693673783 693673422 1.310000e-83 320
38 TraesCS3D01G000400 chr5A 90.857 175 16 0 891 1065 693674754 693674580 4.870000e-58 235
39 TraesCS3D01G000400 chr5A 89.143 175 19 0 1273 1447 693674473 693674299 4.910000e-53 219
40 TraesCS3D01G000400 chr6A 88.000 175 21 0 891 1065 399722185 399722359 1.060000e-49 207


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G000400 chr3D 355416 358339 2923 True 5400.000000 5400 100.000000 1 2924 1 chr3D.!!$R1 2923
1 TraesCS3D01G000400 chr3D 364575 365206 631 False 1151.000000 1151 99.525000 3 634 1 chr3D.!!$F1 631
2 TraesCS3D01G000400 chr3D 554681891 554682534 643 True 1123.000000 1123 98.140000 1 644 1 chr3D.!!$R3 643
3 TraesCS3D01G000400 chr3D 390634 391819 1185 True 448.500000 638 84.570000 870 1945 2 chr3D.!!$R4 1075
4 TraesCS3D01G000400 chr3A 9185697 9186752 1055 False 1522.000000 1522 92.850000 1012 2060 1 chr3A.!!$F2 1048
5 TraesCS3D01G000400 chr3A 9111470 9112185 715 False 669.000000 669 83.799000 1236 1939 1 chr3A.!!$F1 703
6 TraesCS3D01G000400 chr3B 6126101 6127675 1574 False 889.000000 1271 88.623500 636 2060 2 chr3B.!!$F3 1424
7 TraesCS3D01G000400 chr3B 6117642 6118792 1150 False 427.500000 590 86.489500 870 1933 2 chr3B.!!$F2 1063
8 TraesCS3D01G000400 chr1D 460293530 460294174 644 False 1151.000000 1151 98.915000 1 643 1 chr1D.!!$F1 642
9 TraesCS3D01G000400 chr2D 600615048 600615681 633 False 1133.000000 1133 98.896000 1 634 1 chr2D.!!$F3 633
10 TraesCS3D01G000400 chr2D 580790488 580791121 633 False 1112.000000 1112 98.273000 1 637 1 chr2D.!!$F2 636
11 TraesCS3D01G000400 chr2D 580460809 580461442 633 False 1105.000000 1105 98.107000 1 634 1 chr2D.!!$F1 633
12 TraesCS3D01G000400 chr7D 227550133 227550769 636 False 1112.000000 1112 98.273000 1 634 1 chr7D.!!$F2 633
13 TraesCS3D01G000400 chr7D 232368016 232368649 633 True 1105.000000 1105 98.107000 1 634 1 chr7D.!!$R2 633
14 TraesCS3D01G000400 chr4D 12092985 12093619 634 False 1110.000000 1110 98.268000 1 634 1 chr4D.!!$F1 633
15 TraesCS3D01G000400 chr4D 508431332 508432680 1348 True 255.666667 313 87.445667 891 1925 3 chr4D.!!$R1 1034
16 TraesCS3D01G000400 chr4B 659520314 659521733 1419 False 260.000000 326 86.648000 891 1925 3 chr4B.!!$F1 1034
17 TraesCS3D01G000400 chr5A 693673422 693674754 1332 True 258.000000 320 87.595667 891 1923 3 chr5A.!!$R1 1032

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
739 747 0.037975 GGCACAAGAGGCAACAATGG 60.038 55.0 0.0 0.0 41.41 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2495 3411 0.032678 CTATGCTAGCCACTCCACCG 59.967 60.0 13.29 0.0 0.0 4.94 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
572 580 2.582052 ACGCTTTTGAAACCATGAGGA 58.418 42.857 0.00 0.00 38.69 3.71
648 656 6.239487 CGGAGGGAGTACATTAATATTGGTCA 60.239 42.308 0.00 0.00 0.00 4.02
651 659 7.509546 AGGGAGTACATTAATATTGGTCACTG 58.490 38.462 0.00 0.00 0.00 3.66
652 660 7.127339 AGGGAGTACATTAATATTGGTCACTGT 59.873 37.037 0.00 0.00 0.00 3.55
653 661 7.773690 GGGAGTACATTAATATTGGTCACTGTT 59.226 37.037 0.00 0.00 0.00 3.16
699 707 3.952811 GCCCCGCGCTCTAAATAG 58.047 61.111 5.56 0.00 0.00 1.73
701 709 1.004918 CCCCGCGCTCTAAATAGGG 60.005 63.158 5.56 5.71 38.59 3.53
733 741 1.675310 CATCGGGCACAAGAGGCAA 60.675 57.895 0.00 0.00 35.46 4.52
734 742 1.675641 ATCGGGCACAAGAGGCAAC 60.676 57.895 0.00 0.00 35.46 4.17
739 747 0.037975 GGCACAAGAGGCAACAATGG 60.038 55.000 0.00 0.00 41.41 3.16
750 758 0.967380 CAACAATGGCACCCTCCTCC 60.967 60.000 0.00 0.00 0.00 4.30
751 759 2.124570 CAATGGCACCCTCCTCCG 60.125 66.667 0.00 0.00 0.00 4.63
754 762 1.789576 AATGGCACCCTCCTCCGTTT 61.790 55.000 0.00 0.00 0.00 3.60
761 769 2.506438 CTCCTCCGTTTCCGTCGC 60.506 66.667 0.00 0.00 0.00 5.19
779 787 1.732917 CGGCTGCTCTACTCCTCTG 59.267 63.158 0.00 0.00 0.00 3.35
850 858 3.789290 ATCCCCCGGCCGTAACAC 61.789 66.667 26.12 0.00 0.00 3.32
856 864 4.668118 CGGCCGTAACACCACCGT 62.668 66.667 19.50 0.00 39.05 4.83
862 870 0.454957 CGTAACACCACCGTCCTACG 60.455 60.000 0.00 0.00 42.11 3.51
899 907 2.768492 CCAATTCCAGCTGGCTCGC 61.768 63.158 28.91 0.00 34.44 5.03
987 995 1.305201 TCAAGAACGTCAACTTGCCC 58.695 50.000 18.61 0.00 41.91 5.36
1014 1022 4.101448 GCCATGACCTCCTGCGGT 62.101 66.667 0.00 0.00 40.80 5.68
1095 1105 1.327460 CGCCGTACGTTAGCACTACTA 59.673 52.381 15.21 0.00 36.87 1.82
1097 1107 2.352960 GCCGTACGTTAGCACTACTACT 59.647 50.000 15.21 0.00 0.00 2.57
1098 1108 3.555956 GCCGTACGTTAGCACTACTACTA 59.444 47.826 15.21 0.00 0.00 1.82
1100 1110 4.566759 CCGTACGTTAGCACTACTACTACA 59.433 45.833 15.21 0.00 0.00 2.74
1101 1111 5.484958 CGTACGTTAGCACTACTACTACAC 58.515 45.833 7.22 0.00 0.00 2.90
1102 1112 5.062183 CGTACGTTAGCACTACTACTACACA 59.938 44.000 7.22 0.00 0.00 3.72
1103 1113 5.288543 ACGTTAGCACTACTACTACACAC 57.711 43.478 0.00 0.00 0.00 3.82
1104 1114 4.999950 ACGTTAGCACTACTACTACACACT 59.000 41.667 0.00 0.00 0.00 3.55
1105 1115 5.106791 ACGTTAGCACTACTACTACACACTG 60.107 44.000 0.00 0.00 0.00 3.66
1106 1116 3.851976 AGCACTACTACTACACACTGC 57.148 47.619 0.00 0.00 0.00 4.40
1287 1623 3.120086 AAACCACCCTGCGTGCTCT 62.120 57.895 0.00 0.00 41.53 4.09
1465 1832 4.040095 GGTACCACACCCACCTATCTATTC 59.960 50.000 7.15 0.00 42.07 1.75
1466 1833 3.046374 ACCACACCCACCTATCTATTCC 58.954 50.000 0.00 0.00 0.00 3.01
1470 1837 0.246635 CCCACCTATCTATTCCGCCG 59.753 60.000 0.00 0.00 0.00 6.46
1491 1858 3.243602 CGGTCACCATCATAACCATCGTA 60.244 47.826 0.00 0.00 0.00 3.43
1549 2444 2.412089 GACATTTACTGACACTGGCGAC 59.588 50.000 0.00 0.00 0.00 5.19
1743 2659 3.699134 GATGGCTCCAACGGGGGAC 62.699 68.421 0.00 0.00 46.47 4.46
1794 2710 2.040988 TGGAGGATGGATGCCCGA 60.041 61.111 0.00 0.00 34.29 5.14
1856 2772 2.125552 TGGCAAGATGCTCGTCGG 60.126 61.111 2.00 0.00 44.28 4.79
1887 2803 4.020617 CCCGCTGACTGGAAGCCA 62.021 66.667 0.00 0.00 37.60 4.75
1953 2869 5.050091 GGATCGACCATTTATGTGATGTCAC 60.050 44.000 6.21 6.21 41.77 3.67
2020 2936 9.684702 AATAATGGAAAGAGGAGTAGGGTTATA 57.315 33.333 0.00 0.00 0.00 0.98
2053 2969 7.444183 CCTCATGAGACGGGCTTTAAAATTATA 59.556 37.037 24.62 0.00 0.00 0.98
2060 2976 8.890718 AGACGGGCTTTAAAATTATAGAAAGAC 58.109 33.333 0.00 0.00 36.39 3.01
2061 2977 8.570068 ACGGGCTTTAAAATTATAGAAAGACA 57.430 30.769 1.83 0.00 38.45 3.41
2062 2978 9.185680 ACGGGCTTTAAAATTATAGAAAGACAT 57.814 29.630 1.83 0.00 38.45 3.06
2258 3174 9.685276 ACATGAATATTCTCAAAGGTACATGAA 57.315 29.630 16.24 0.00 36.37 2.57
2259 3175 9.941664 CATGAATATTCTCAAAGGTACATGAAC 57.058 33.333 16.24 0.00 35.09 3.18
2260 3176 9.685276 ATGAATATTCTCAAAGGTACATGAACA 57.315 29.630 16.24 0.00 0.00 3.18
2261 3177 9.685276 TGAATATTCTCAAAGGTACATGAACAT 57.315 29.630 16.24 0.00 0.00 2.71
2404 3320 8.885494 TTAAATATGAACAATGCTAAATGGGC 57.115 30.769 0.00 0.00 0.00 5.36
2405 3321 3.825143 ATGAACAATGCTAAATGGGCC 57.175 42.857 0.00 0.00 0.00 5.80
2406 3322 1.476085 TGAACAATGCTAAATGGGCCG 59.524 47.619 0.00 0.00 0.00 6.13
2407 3323 0.175531 AACAATGCTAAATGGGCCGC 59.824 50.000 0.00 0.00 0.00 6.53
2408 3324 0.969917 ACAATGCTAAATGGGCCGCA 60.970 50.000 5.51 5.51 36.75 5.69
2409 3325 0.528249 CAATGCTAAATGGGCCGCAC 60.528 55.000 5.15 0.00 34.93 5.34
2410 3326 0.684153 AATGCTAAATGGGCCGCACT 60.684 50.000 5.15 0.00 34.93 4.40
2411 3327 1.386525 ATGCTAAATGGGCCGCACTG 61.387 55.000 5.15 0.00 34.93 3.66
2412 3328 2.774799 GCTAAATGGGCCGCACTGG 61.775 63.158 0.00 0.00 42.50 4.00
2413 3329 1.378514 CTAAATGGGCCGCACTGGT 60.379 57.895 0.00 0.00 41.21 4.00
2414 3330 0.965363 CTAAATGGGCCGCACTGGTT 60.965 55.000 0.00 0.00 41.21 3.67
2415 3331 0.963355 TAAATGGGCCGCACTGGTTC 60.963 55.000 0.00 0.00 41.21 3.62
2416 3332 4.740822 ATGGGCCGCACTGGTTCC 62.741 66.667 0.00 0.00 41.21 3.62
2418 3334 4.966787 GGGCCGCACTGGTTCCAA 62.967 66.667 0.00 0.00 41.21 3.53
2419 3335 3.670377 GGCCGCACTGGTTCCAAC 61.670 66.667 0.00 0.00 41.21 3.77
2435 3351 5.537188 GTTCCAACCAATTTGAATAGCACA 58.463 37.500 0.00 0.00 37.39 4.57
2436 3352 5.798125 TCCAACCAATTTGAATAGCACAA 57.202 34.783 0.00 0.00 37.39 3.33
2437 3353 5.782047 TCCAACCAATTTGAATAGCACAAG 58.218 37.500 0.00 0.00 37.39 3.16
2438 3354 4.389687 CCAACCAATTTGAATAGCACAAGC 59.610 41.667 0.00 0.00 37.39 4.01
2439 3355 5.232463 CAACCAATTTGAATAGCACAAGCT 58.768 37.500 0.00 0.00 45.67 3.74
2440 3356 5.697633 CAACCAATTTGAATAGCACAAGCTT 59.302 36.000 0.00 0.00 42.87 3.74
2441 3357 6.203338 CAACCAATTTGAATAGCACAAGCTTT 59.797 34.615 0.00 0.00 42.87 3.51
2442 3358 7.254863 CAACCAATTTGAATAGCACAAGCTTTT 60.255 33.333 0.00 0.00 42.87 2.27
2451 3367 3.708563 GCACAAGCTTTTAGTTCCACA 57.291 42.857 0.00 0.00 37.91 4.17
2452 3368 3.632189 GCACAAGCTTTTAGTTCCACAG 58.368 45.455 0.00 0.00 37.91 3.66
2453 3369 3.066760 GCACAAGCTTTTAGTTCCACAGT 59.933 43.478 0.00 0.00 37.91 3.55
2454 3370 4.274950 GCACAAGCTTTTAGTTCCACAGTA 59.725 41.667 0.00 0.00 37.91 2.74
2455 3371 5.748592 CACAAGCTTTTAGTTCCACAGTAC 58.251 41.667 0.00 0.00 0.00 2.73
2456 3372 5.295787 CACAAGCTTTTAGTTCCACAGTACA 59.704 40.000 0.00 0.00 0.00 2.90
2457 3373 6.017109 CACAAGCTTTTAGTTCCACAGTACAT 60.017 38.462 0.00 0.00 0.00 2.29
2458 3374 6.546034 ACAAGCTTTTAGTTCCACAGTACATT 59.454 34.615 0.00 0.00 0.00 2.71
2459 3375 7.717875 ACAAGCTTTTAGTTCCACAGTACATTA 59.282 33.333 0.00 0.00 0.00 1.90
2460 3376 8.564574 CAAGCTTTTAGTTCCACAGTACATTAA 58.435 33.333 0.00 0.00 0.00 1.40
2461 3377 8.685838 AGCTTTTAGTTCCACAGTACATTAAA 57.314 30.769 0.00 0.00 0.00 1.52
2462 3378 9.127277 AGCTTTTAGTTCCACAGTACATTAAAA 57.873 29.630 0.00 0.00 0.00 1.52
2463 3379 9.177304 GCTTTTAGTTCCACAGTACATTAAAAC 57.823 33.333 0.00 0.00 0.00 2.43
2468 3384 8.617290 AGTTCCACAGTACATTAAAACTAAGG 57.383 34.615 0.00 0.00 0.00 2.69
2469 3385 7.664318 AGTTCCACAGTACATTAAAACTAAGGG 59.336 37.037 0.00 0.00 0.00 3.95
2470 3386 6.478129 TCCACAGTACATTAAAACTAAGGGG 58.522 40.000 0.00 0.00 0.00 4.79
2471 3387 5.124936 CCACAGTACATTAAAACTAAGGGGC 59.875 44.000 0.00 0.00 0.00 5.80
2472 3388 5.124936 CACAGTACATTAAAACTAAGGGGCC 59.875 44.000 0.00 0.00 0.00 5.80
2473 3389 5.222171 ACAGTACATTAAAACTAAGGGGCCA 60.222 40.000 4.39 0.00 0.00 5.36
2474 3390 5.712917 CAGTACATTAAAACTAAGGGGCCAA 59.287 40.000 4.39 0.00 0.00 4.52
2475 3391 6.209788 CAGTACATTAAAACTAAGGGGCCAAA 59.790 38.462 4.39 0.00 0.00 3.28
2476 3392 5.738619 ACATTAAAACTAAGGGGCCAAAG 57.261 39.130 4.39 1.10 0.00 2.77
2477 3393 5.152193 ACATTAAAACTAAGGGGCCAAAGT 58.848 37.500 4.39 1.84 0.00 2.66
2478 3394 6.316513 ACATTAAAACTAAGGGGCCAAAGTA 58.683 36.000 4.39 0.00 0.00 2.24
2479 3395 6.436218 ACATTAAAACTAAGGGGCCAAAGTAG 59.564 38.462 4.39 2.60 0.00 2.57
2480 3396 3.451402 AAACTAAGGGGCCAAAGTAGG 57.549 47.619 4.39 0.00 0.00 3.18
2496 3412 8.425577 CCAAAGTAGGCATATAAATCTATCCG 57.574 38.462 0.00 0.00 0.00 4.18
2497 3413 7.495934 CCAAAGTAGGCATATAAATCTATCCGG 59.504 40.741 0.00 0.00 0.00 5.14
2498 3414 7.735326 AAGTAGGCATATAAATCTATCCGGT 57.265 36.000 0.00 0.00 0.00 5.28
2499 3415 7.113658 AGTAGGCATATAAATCTATCCGGTG 57.886 40.000 0.00 0.00 0.00 4.94
2500 3416 5.359194 AGGCATATAAATCTATCCGGTGG 57.641 43.478 0.00 0.00 0.00 4.61
2501 3417 5.030147 AGGCATATAAATCTATCCGGTGGA 58.970 41.667 0.00 0.00 35.55 4.02
2502 3418 5.129485 AGGCATATAAATCTATCCGGTGGAG 59.871 44.000 0.00 0.00 34.05 3.86
2503 3419 5.104900 GGCATATAAATCTATCCGGTGGAGT 60.105 44.000 0.00 0.00 34.05 3.85
2504 3420 5.812642 GCATATAAATCTATCCGGTGGAGTG 59.187 44.000 0.00 0.00 34.05 3.51
2505 3421 4.891992 ATAAATCTATCCGGTGGAGTGG 57.108 45.455 0.00 0.00 34.05 4.00
2506 3422 0.759346 AATCTATCCGGTGGAGTGGC 59.241 55.000 0.00 0.00 34.05 5.01
2507 3423 0.105453 ATCTATCCGGTGGAGTGGCT 60.105 55.000 0.00 0.00 34.05 4.75
2508 3424 0.554305 TCTATCCGGTGGAGTGGCTA 59.446 55.000 0.00 0.00 34.05 3.93
2509 3425 0.962489 CTATCCGGTGGAGTGGCTAG 59.038 60.000 0.00 0.00 34.05 3.42
2510 3426 1.113517 TATCCGGTGGAGTGGCTAGC 61.114 60.000 6.04 6.04 34.05 3.42
2511 3427 3.390521 CCGGTGGAGTGGCTAGCA 61.391 66.667 18.24 0.00 0.00 3.49
2512 3428 2.735772 CCGGTGGAGTGGCTAGCAT 61.736 63.158 18.24 0.89 0.00 3.79
2513 3429 1.399744 CCGGTGGAGTGGCTAGCATA 61.400 60.000 18.24 1.35 0.00 3.14
2514 3430 0.032678 CGGTGGAGTGGCTAGCATAG 59.967 60.000 18.24 0.00 43.09 2.23
2524 3440 3.463574 CTAGCATAGCTCGACCACG 57.536 57.895 0.00 0.00 40.44 4.94
2525 3441 0.661780 CTAGCATAGCTCGACCACGC 60.662 60.000 0.00 0.00 40.44 5.34
2526 3442 1.101635 TAGCATAGCTCGACCACGCT 61.102 55.000 2.26 2.26 40.44 5.07
2527 3443 1.101635 AGCATAGCTCGACCACGCTA 61.102 55.000 6.57 6.57 42.33 4.26
2529 3445 1.603172 GCATAGCTCGACCACGCTATT 60.603 52.381 12.73 0.00 44.63 1.73
2530 3446 2.054363 CATAGCTCGACCACGCTATTG 58.946 52.381 12.73 6.75 44.63 1.90
2531 3447 1.385528 TAGCTCGACCACGCTATTGA 58.614 50.000 0.00 0.00 37.68 2.57
2532 3448 0.101399 AGCTCGACCACGCTATTGAG 59.899 55.000 0.00 0.00 39.58 3.02
2533 3449 0.179134 GCTCGACCACGCTATTGAGT 60.179 55.000 0.00 0.00 39.58 3.41
2534 3450 1.736032 GCTCGACCACGCTATTGAGTT 60.736 52.381 0.00 0.00 39.58 3.01
2535 3451 2.186076 CTCGACCACGCTATTGAGTTC 58.814 52.381 0.00 0.00 39.58 3.01
2536 3452 1.542472 TCGACCACGCTATTGAGTTCA 59.458 47.619 0.00 0.00 39.58 3.18
2537 3453 1.654105 CGACCACGCTATTGAGTTCAC 59.346 52.381 0.00 0.00 0.00 3.18
2538 3454 2.683968 GACCACGCTATTGAGTTCACA 58.316 47.619 0.00 0.00 0.00 3.58
2539 3455 2.412089 GACCACGCTATTGAGTTCACAC 59.588 50.000 0.00 0.00 0.00 3.82
2540 3456 2.037251 ACCACGCTATTGAGTTCACACT 59.963 45.455 0.00 0.00 35.17 3.55
2541 3457 3.067106 CCACGCTATTGAGTTCACACTT 58.933 45.455 0.00 0.00 31.22 3.16
2542 3458 3.123621 CCACGCTATTGAGTTCACACTTC 59.876 47.826 0.00 0.00 31.22 3.01
2543 3459 2.987149 ACGCTATTGAGTTCACACTTCG 59.013 45.455 0.00 0.00 31.22 3.79
2544 3460 3.242518 CGCTATTGAGTTCACACTTCGA 58.757 45.455 0.00 0.00 31.22 3.71
2545 3461 3.673338 CGCTATTGAGTTCACACTTCGAA 59.327 43.478 0.00 0.00 31.22 3.71
2546 3462 4.433022 CGCTATTGAGTTCACACTTCGAAC 60.433 45.833 0.00 0.00 42.52 3.95
2547 3463 4.143094 GCTATTGAGTTCACACTTCGAACC 60.143 45.833 0.00 0.00 43.07 3.62
2548 3464 3.536956 TTGAGTTCACACTTCGAACCT 57.463 42.857 0.00 0.00 43.07 3.50
2549 3465 3.536956 TGAGTTCACACTTCGAACCTT 57.463 42.857 0.00 0.00 43.07 3.50
2550 3466 3.194861 TGAGTTCACACTTCGAACCTTG 58.805 45.455 0.00 0.00 43.07 3.61
2551 3467 2.544267 GAGTTCACACTTCGAACCTTGG 59.456 50.000 0.00 0.00 43.07 3.61
2552 3468 1.002792 GTTCACACTTCGAACCTTGGC 60.003 52.381 0.00 0.00 37.40 4.52
2553 3469 0.878523 TCACACTTCGAACCTTGGCG 60.879 55.000 0.00 0.00 0.00 5.69
2554 3470 1.145377 ACACTTCGAACCTTGGCGT 59.855 52.632 0.00 0.00 0.00 5.68
2555 3471 0.463116 ACACTTCGAACCTTGGCGTT 60.463 50.000 0.00 0.00 0.00 4.84
2556 3472 0.661020 CACTTCGAACCTTGGCGTTT 59.339 50.000 0.00 0.00 0.00 3.60
2557 3473 1.868498 CACTTCGAACCTTGGCGTTTA 59.132 47.619 0.00 0.00 0.00 2.01
2558 3474 1.869132 ACTTCGAACCTTGGCGTTTAC 59.131 47.619 0.00 0.00 0.00 2.01
2559 3475 1.196127 CTTCGAACCTTGGCGTTTACC 59.804 52.381 0.00 0.00 0.00 2.85
2560 3476 0.106335 TCGAACCTTGGCGTTTACCA 59.894 50.000 0.00 0.00 38.16 3.25
2561 3477 1.161843 CGAACCTTGGCGTTTACCAT 58.838 50.000 0.00 0.00 40.13 3.55
2562 3478 1.538075 CGAACCTTGGCGTTTACCATT 59.462 47.619 0.00 0.00 40.13 3.16
2563 3479 2.030628 CGAACCTTGGCGTTTACCATTT 60.031 45.455 0.00 0.00 40.13 2.32
2564 3480 3.551250 CGAACCTTGGCGTTTACCATTTT 60.551 43.478 0.00 0.00 40.13 1.82
2565 3481 4.373527 GAACCTTGGCGTTTACCATTTTT 58.626 39.130 0.00 0.00 40.13 1.94
2592 3508 8.594881 ACTTAAGTTTTCTCATGTACTGACAG 57.405 34.615 1.12 0.00 39.50 3.51
2593 3509 8.421784 ACTTAAGTTTTCTCATGTACTGACAGA 58.578 33.333 10.08 0.00 39.50 3.41
2594 3510 8.589335 TTAAGTTTTCTCATGTACTGACAGAC 57.411 34.615 10.08 3.89 39.50 3.51
2595 3511 6.161855 AGTTTTCTCATGTACTGACAGACA 57.838 37.500 10.08 9.58 39.50 3.41
2596 3512 5.986135 AGTTTTCTCATGTACTGACAGACAC 59.014 40.000 10.08 7.20 39.50 3.67
2597 3513 3.831715 TCTCATGTACTGACAGACACG 57.168 47.619 10.08 2.35 39.50 4.49
2598 3514 3.408634 TCTCATGTACTGACAGACACGA 58.591 45.455 10.08 6.56 39.50 4.35
2599 3515 3.188667 TCTCATGTACTGACAGACACGAC 59.811 47.826 10.08 0.00 39.50 4.34
2600 3516 3.146847 TCATGTACTGACAGACACGACT 58.853 45.455 10.08 0.00 39.50 4.18
2601 3517 3.188667 TCATGTACTGACAGACACGACTC 59.811 47.826 10.08 0.00 39.50 3.36
2602 3518 2.567985 TGTACTGACAGACACGACTCA 58.432 47.619 10.08 0.00 0.00 3.41
2603 3519 2.289820 TGTACTGACAGACACGACTCAC 59.710 50.000 10.08 0.00 0.00 3.51
2604 3520 1.681538 ACTGACAGACACGACTCACT 58.318 50.000 10.08 0.00 0.00 3.41
2605 3521 2.025155 ACTGACAGACACGACTCACTT 58.975 47.619 10.08 0.00 0.00 3.16
2606 3522 2.223595 ACTGACAGACACGACTCACTTG 60.224 50.000 10.08 0.00 0.00 3.16
2607 3523 1.749063 TGACAGACACGACTCACTTGT 59.251 47.619 0.00 0.00 33.69 3.16
2608 3524 2.223502 TGACAGACACGACTCACTTGTC 60.224 50.000 0.00 0.00 44.59 3.18
2609 3525 1.749063 ACAGACACGACTCACTTGTCA 59.251 47.619 0.00 0.00 45.97 3.58
2610 3526 2.362397 ACAGACACGACTCACTTGTCAT 59.638 45.455 0.00 0.00 45.97 3.06
2611 3527 2.983136 CAGACACGACTCACTTGTCATC 59.017 50.000 0.00 0.00 45.97 2.92
2612 3528 2.623416 AGACACGACTCACTTGTCATCA 59.377 45.455 0.00 0.00 45.97 3.07
2613 3529 2.726760 GACACGACTCACTTGTCATCAC 59.273 50.000 0.00 0.00 43.97 3.06
2614 3530 2.362397 ACACGACTCACTTGTCATCACT 59.638 45.455 0.00 0.00 36.82 3.41
2615 3531 3.568430 ACACGACTCACTTGTCATCACTA 59.432 43.478 0.00 0.00 36.82 2.74
2616 3532 4.162072 CACGACTCACTTGTCATCACTAG 58.838 47.826 0.00 0.00 36.82 2.57
2617 3533 3.821600 ACGACTCACTTGTCATCACTAGT 59.178 43.478 0.00 0.00 38.93 2.57
2618 3534 5.001874 ACGACTCACTTGTCATCACTAGTA 58.998 41.667 0.00 0.00 36.58 1.82
2619 3535 5.122554 ACGACTCACTTGTCATCACTAGTAG 59.877 44.000 0.00 0.00 36.58 2.57
2620 3536 5.351740 CGACTCACTTGTCATCACTAGTAGA 59.648 44.000 3.59 0.00 36.58 2.59
2621 3537 6.128254 CGACTCACTTGTCATCACTAGTAGAA 60.128 42.308 3.59 0.00 36.58 2.10
2622 3538 7.526142 ACTCACTTGTCATCACTAGTAGAAA 57.474 36.000 3.59 0.00 36.58 2.52
2623 3539 7.952671 ACTCACTTGTCATCACTAGTAGAAAA 58.047 34.615 3.59 0.00 36.58 2.29
2624 3540 8.421784 ACTCACTTGTCATCACTAGTAGAAAAA 58.578 33.333 3.59 0.00 36.58 1.94
2625 3541 8.818141 TCACTTGTCATCACTAGTAGAAAAAG 57.182 34.615 3.59 5.04 36.58 2.27
2626 3542 7.872993 TCACTTGTCATCACTAGTAGAAAAAGG 59.127 37.037 3.59 0.00 36.58 3.11
2627 3543 7.872993 CACTTGTCATCACTAGTAGAAAAAGGA 59.127 37.037 3.59 0.00 36.58 3.36
2628 3544 8.598041 ACTTGTCATCACTAGTAGAAAAAGGAT 58.402 33.333 3.59 0.00 36.90 3.24
2629 3545 9.092876 CTTGTCATCACTAGTAGAAAAAGGATC 57.907 37.037 3.59 0.00 0.00 3.36
2630 3546 8.134202 TGTCATCACTAGTAGAAAAAGGATCA 57.866 34.615 3.59 0.00 0.00 2.92
2631 3547 8.762645 TGTCATCACTAGTAGAAAAAGGATCAT 58.237 33.333 3.59 0.00 0.00 2.45
2632 3548 9.255304 GTCATCACTAGTAGAAAAAGGATCATC 57.745 37.037 3.59 0.00 0.00 2.92
2633 3549 9.206690 TCATCACTAGTAGAAAAAGGATCATCT 57.793 33.333 3.59 0.00 0.00 2.90
2634 3550 9.258826 CATCACTAGTAGAAAAAGGATCATCTG 57.741 37.037 3.59 0.00 0.00 2.90
2635 3551 8.367660 TCACTAGTAGAAAAAGGATCATCTGT 57.632 34.615 3.59 0.00 0.00 3.41
2636 3552 8.470805 TCACTAGTAGAAAAAGGATCATCTGTC 58.529 37.037 3.59 0.00 0.00 3.51
2637 3553 7.708752 CACTAGTAGAAAAAGGATCATCTGTCC 59.291 40.741 3.59 0.00 35.94 4.02
2638 3554 5.995446 AGTAGAAAAAGGATCATCTGTCCC 58.005 41.667 0.00 0.00 36.36 4.46
2639 3555 3.878778 AGAAAAAGGATCATCTGTCCCG 58.121 45.455 0.00 0.00 36.36 5.14
2640 3556 2.717639 AAAAGGATCATCTGTCCCGG 57.282 50.000 0.00 0.00 36.36 5.73
2641 3557 1.584724 AAAGGATCATCTGTCCCGGT 58.415 50.000 0.00 0.00 36.36 5.28
2642 3558 1.584724 AAGGATCATCTGTCCCGGTT 58.415 50.000 0.00 0.00 36.36 4.44
2643 3559 0.833287 AGGATCATCTGTCCCGGTTG 59.167 55.000 0.00 0.00 36.36 3.77
2644 3560 0.179045 GGATCATCTGTCCCGGTTGG 60.179 60.000 0.00 0.00 0.00 3.77
2645 3561 0.541863 GATCATCTGTCCCGGTTGGT 59.458 55.000 0.00 0.00 34.77 3.67
2646 3562 1.760613 GATCATCTGTCCCGGTTGGTA 59.239 52.381 0.00 0.00 34.77 3.25
2647 3563 1.646912 TCATCTGTCCCGGTTGGTAA 58.353 50.000 0.00 0.00 34.77 2.85
2648 3564 1.553248 TCATCTGTCCCGGTTGGTAAG 59.447 52.381 0.00 0.00 34.77 2.34
2649 3565 0.909623 ATCTGTCCCGGTTGGTAAGG 59.090 55.000 0.00 0.00 34.77 2.69
2650 3566 1.196104 TCTGTCCCGGTTGGTAAGGG 61.196 60.000 0.00 0.00 46.40 3.95
2651 3567 2.045634 GTCCCGGTTGGTAAGGGC 60.046 66.667 0.00 0.00 44.70 5.19
2652 3568 3.332385 TCCCGGTTGGTAAGGGCC 61.332 66.667 0.00 0.00 44.70 5.80
2653 3569 3.335729 CCCGGTTGGTAAGGGCCT 61.336 66.667 0.00 0.00 38.51 5.19
2654 3570 2.761160 CCGGTTGGTAAGGGCCTT 59.239 61.111 24.44 24.44 0.00 4.35
2655 3571 1.076014 CCGGTTGGTAAGGGCCTTT 59.924 57.895 26.29 5.08 0.00 3.11
2656 3572 0.541063 CCGGTTGGTAAGGGCCTTTT 60.541 55.000 26.29 2.86 0.00 2.27
2657 3573 0.601057 CGGTTGGTAAGGGCCTTTTG 59.399 55.000 26.29 3.03 0.00 2.44
2658 3574 1.712056 GGTTGGTAAGGGCCTTTTGT 58.288 50.000 26.29 1.50 0.00 2.83
2659 3575 1.616865 GGTTGGTAAGGGCCTTTTGTC 59.383 52.381 26.29 12.32 0.00 3.18
2660 3576 1.616865 GTTGGTAAGGGCCTTTTGTCC 59.383 52.381 26.29 20.31 0.00 4.02
2661 3577 0.113580 TGGTAAGGGCCTTTTGTCCC 59.886 55.000 26.29 16.23 42.94 4.46
2665 3581 2.203582 GGGCCTTTTGTCCCGGTT 60.204 61.111 0.84 0.00 32.00 4.44
2666 3582 2.570284 GGGCCTTTTGTCCCGGTTG 61.570 63.158 0.84 0.00 32.00 3.77
2667 3583 1.830847 GGCCTTTTGTCCCGGTTGT 60.831 57.895 0.00 0.00 0.00 3.32
2668 3584 1.396607 GGCCTTTTGTCCCGGTTGTT 61.397 55.000 0.00 0.00 0.00 2.83
2669 3585 0.249280 GCCTTTTGTCCCGGTTGTTG 60.249 55.000 0.00 0.00 0.00 3.33
2670 3586 1.394618 CCTTTTGTCCCGGTTGTTGA 58.605 50.000 0.00 0.00 0.00 3.18
2671 3587 1.751924 CCTTTTGTCCCGGTTGTTGAA 59.248 47.619 0.00 0.00 0.00 2.69
2672 3588 2.364002 CCTTTTGTCCCGGTTGTTGAAT 59.636 45.455 0.00 0.00 0.00 2.57
2673 3589 3.552068 CCTTTTGTCCCGGTTGTTGAATC 60.552 47.826 0.00 0.00 0.00 2.52
2674 3590 1.231221 TTGTCCCGGTTGTTGAATCG 58.769 50.000 0.00 0.00 35.31 3.34
2678 3594 2.874751 CGGTTGTTGAATCGGGGC 59.125 61.111 0.00 0.00 31.64 5.80
2679 3595 1.674322 CGGTTGTTGAATCGGGGCT 60.674 57.895 0.00 0.00 31.64 5.19
2680 3596 0.391927 CGGTTGTTGAATCGGGGCTA 60.392 55.000 0.00 0.00 31.64 3.93
2681 3597 1.828979 GGTTGTTGAATCGGGGCTAA 58.171 50.000 0.00 0.00 0.00 3.09
2682 3598 2.164338 GGTTGTTGAATCGGGGCTAAA 58.836 47.619 0.00 0.00 0.00 1.85
2683 3599 2.163613 GGTTGTTGAATCGGGGCTAAAG 59.836 50.000 0.00 0.00 0.00 1.85
2684 3600 2.122783 TGTTGAATCGGGGCTAAAGG 57.877 50.000 0.00 0.00 0.00 3.11
2685 3601 1.340600 TGTTGAATCGGGGCTAAAGGG 60.341 52.381 0.00 0.00 0.00 3.95
2686 3602 0.996583 TTGAATCGGGGCTAAAGGGT 59.003 50.000 0.00 0.00 0.00 4.34
2687 3603 0.544697 TGAATCGGGGCTAAAGGGTC 59.455 55.000 0.00 0.00 0.00 4.46
2688 3604 0.532196 GAATCGGGGCTAAAGGGTCG 60.532 60.000 0.00 0.00 0.00 4.79
2689 3605 1.269703 AATCGGGGCTAAAGGGTCGT 61.270 55.000 0.00 0.00 0.00 4.34
2690 3606 1.269703 ATCGGGGCTAAAGGGTCGTT 61.270 55.000 0.00 0.00 0.00 3.85
2691 3607 0.614415 TCGGGGCTAAAGGGTCGTTA 60.614 55.000 0.00 0.00 0.00 3.18
2692 3608 0.460811 CGGGGCTAAAGGGTCGTTAC 60.461 60.000 0.00 0.00 0.00 2.50
2693 3609 0.907486 GGGGCTAAAGGGTCGTTACT 59.093 55.000 0.00 0.00 0.00 2.24
2694 3610 2.110578 GGGGCTAAAGGGTCGTTACTA 58.889 52.381 0.00 0.00 0.00 1.82
2695 3611 2.501316 GGGGCTAAAGGGTCGTTACTAA 59.499 50.000 0.00 0.00 0.00 2.24
2696 3612 3.135348 GGGGCTAAAGGGTCGTTACTAAT 59.865 47.826 0.00 0.00 0.00 1.73
2697 3613 4.124970 GGGCTAAAGGGTCGTTACTAATG 58.875 47.826 0.00 0.00 0.00 1.90
2698 3614 3.558829 GGCTAAAGGGTCGTTACTAATGC 59.441 47.826 0.00 0.00 0.00 3.56
2699 3615 3.558829 GCTAAAGGGTCGTTACTAATGCC 59.441 47.826 0.00 0.00 0.00 4.40
2700 3616 2.704464 AAGGGTCGTTACTAATGCCC 57.296 50.000 10.40 10.40 35.35 5.36
2701 3617 1.875488 AGGGTCGTTACTAATGCCCT 58.125 50.000 13.37 13.37 38.46 5.19
2702 3618 3.036452 AGGGTCGTTACTAATGCCCTA 57.964 47.619 15.90 0.00 40.21 3.53
2703 3619 2.963782 AGGGTCGTTACTAATGCCCTAG 59.036 50.000 15.90 0.00 40.21 3.02
2704 3620 2.547430 GGGTCGTTACTAATGCCCTAGC 60.547 54.545 10.85 0.00 40.48 3.42
2705 3621 2.547430 GGTCGTTACTAATGCCCTAGCC 60.547 54.545 0.00 0.00 38.69 3.93
2706 3622 1.690352 TCGTTACTAATGCCCTAGCCC 59.310 52.381 0.00 0.00 38.69 5.19
2707 3623 1.692519 CGTTACTAATGCCCTAGCCCT 59.307 52.381 0.00 0.00 38.69 5.19
2708 3624 2.104281 CGTTACTAATGCCCTAGCCCTT 59.896 50.000 0.00 0.00 38.69 3.95
2709 3625 3.433173 CGTTACTAATGCCCTAGCCCTTT 60.433 47.826 0.00 0.00 38.69 3.11
2710 3626 4.202284 CGTTACTAATGCCCTAGCCCTTTA 60.202 45.833 0.00 0.00 38.69 1.85
2711 3627 5.306394 GTTACTAATGCCCTAGCCCTTTAG 58.694 45.833 9.81 9.81 38.69 1.85
2712 3628 3.394645 ACTAATGCCCTAGCCCTTTAGT 58.605 45.455 10.64 10.64 38.69 2.24
2713 3629 3.391626 ACTAATGCCCTAGCCCTTTAGTC 59.608 47.826 10.64 0.00 35.19 2.59
2714 3630 1.141185 ATGCCCTAGCCCTTTAGTCC 58.859 55.000 0.00 0.00 38.69 3.85
2715 3631 0.986550 TGCCCTAGCCCTTTAGTCCC 60.987 60.000 0.00 0.00 38.69 4.46
2716 3632 2.041206 GCCCTAGCCCTTTAGTCCCG 62.041 65.000 0.00 0.00 0.00 5.14
2717 3633 1.408453 CCCTAGCCCTTTAGTCCCGG 61.408 65.000 0.00 0.00 0.00 5.73
2718 3634 0.690077 CCTAGCCCTTTAGTCCCGGT 60.690 60.000 0.00 0.00 0.00 5.28
2719 3635 1.201424 CTAGCCCTTTAGTCCCGGTT 58.799 55.000 0.00 0.00 0.00 4.44
2720 3636 1.138464 CTAGCCCTTTAGTCCCGGTTC 59.862 57.143 0.00 0.00 0.00 3.62
2721 3637 0.546988 AGCCCTTTAGTCCCGGTTCT 60.547 55.000 0.00 0.15 0.00 3.01
2722 3638 0.327259 GCCCTTTAGTCCCGGTTCTT 59.673 55.000 0.00 0.00 0.00 2.52
2723 3639 1.556451 GCCCTTTAGTCCCGGTTCTTA 59.444 52.381 0.00 0.00 0.00 2.10
2724 3640 2.679059 GCCCTTTAGTCCCGGTTCTTAC 60.679 54.545 0.00 0.00 0.00 2.34
2725 3641 2.568509 CCCTTTAGTCCCGGTTCTTACA 59.431 50.000 0.00 0.00 0.00 2.41
2726 3642 3.593096 CCTTTAGTCCCGGTTCTTACAC 58.407 50.000 0.00 0.00 0.00 2.90
2727 3643 3.248266 CTTTAGTCCCGGTTCTTACACG 58.752 50.000 0.00 0.00 0.00 4.49
2728 3644 2.198827 TAGTCCCGGTTCTTACACGA 57.801 50.000 0.00 0.00 0.00 4.35
2729 3645 1.331214 AGTCCCGGTTCTTACACGAA 58.669 50.000 0.00 0.00 0.00 3.85
2730 3646 1.000171 AGTCCCGGTTCTTACACGAAC 60.000 52.381 0.00 0.00 41.91 3.95
2735 3651 3.892200 GTTCTTACACGAACCGGGA 57.108 52.632 6.32 0.00 37.82 5.14
2736 3652 1.422388 GTTCTTACACGAACCGGGAC 58.578 55.000 6.32 0.00 37.82 4.46
2737 3653 1.039068 TTCTTACACGAACCGGGACA 58.961 50.000 6.32 0.00 32.98 4.02
2738 3654 1.039068 TCTTACACGAACCGGGACAA 58.961 50.000 6.32 0.00 32.98 3.18
2739 3655 1.411977 TCTTACACGAACCGGGACAAA 59.588 47.619 6.32 0.00 32.98 2.83
2740 3656 2.037511 TCTTACACGAACCGGGACAAAT 59.962 45.455 6.32 0.00 32.98 2.32
2741 3657 1.798283 TACACGAACCGGGACAAATG 58.202 50.000 6.32 0.00 32.98 2.32
2742 3658 0.887387 ACACGAACCGGGACAAATGG 60.887 55.000 6.32 0.00 32.98 3.16
2743 3659 1.302993 ACGAACCGGGACAAATGGG 60.303 57.895 6.32 0.00 0.00 4.00
2744 3660 2.696759 CGAACCGGGACAAATGGGC 61.697 63.158 6.32 0.00 0.00 5.36
2745 3661 2.283604 AACCGGGACAAATGGGCC 60.284 61.111 6.32 0.00 0.00 5.80
2746 3662 2.781431 GAACCGGGACAAATGGGCCT 62.781 60.000 6.32 0.00 0.00 5.19
2747 3663 2.440247 CCGGGACAAATGGGCCTC 60.440 66.667 4.53 0.00 0.00 4.70
2748 3664 2.440247 CGGGACAAATGGGCCTCC 60.440 66.667 4.53 2.00 0.00 4.30
2790 3706 2.361737 GCAGGAGGGCCTTTGGTC 60.362 66.667 7.89 0.00 43.90 4.02
2796 3712 4.295199 GGGCCTTTGGTCCCGGTT 62.295 66.667 0.84 0.00 42.67 4.44
2797 3713 2.989253 GGCCTTTGGTCCCGGTTG 60.989 66.667 0.00 0.00 0.00 3.77
2798 3714 2.989253 GCCTTTGGTCCCGGTTGG 60.989 66.667 0.00 0.00 0.00 3.77
2799 3715 2.518933 CCTTTGGTCCCGGTTGGT 59.481 61.111 0.00 0.00 34.77 3.67
2800 3716 1.901464 CCTTTGGTCCCGGTTGGTG 60.901 63.158 0.00 0.00 34.77 4.17
2801 3717 1.149627 CTTTGGTCCCGGTTGGTGA 59.850 57.895 0.00 0.00 34.77 4.02
2802 3718 1.152922 TTTGGTCCCGGTTGGTGAC 60.153 57.895 0.00 0.00 35.74 3.67
2803 3719 1.923006 TTTGGTCCCGGTTGGTGACA 61.923 55.000 0.00 0.00 37.25 3.58
2804 3720 2.281276 GGTCCCGGTTGGTGACAC 60.281 66.667 0.00 0.00 42.67 3.67
2805 3721 2.281276 GTCCCGGTTGGTGACACC 60.281 66.667 18.28 18.28 42.67 4.16
2814 3730 2.281276 GGTGACACCAACCGGGAC 60.281 66.667 20.14 0.00 38.42 4.46
2815 3731 2.281276 GTGACACCAACCGGGACC 60.281 66.667 6.32 0.00 41.15 4.46
2816 3732 2.768769 TGACACCAACCGGGACCA 60.769 61.111 6.32 0.00 41.15 4.02
2817 3733 2.376165 TGACACCAACCGGGACCAA 61.376 57.895 6.32 0.00 41.15 3.67
2818 3734 1.152922 GACACCAACCGGGACCAAA 60.153 57.895 6.32 0.00 41.15 3.28
2819 3735 0.752376 GACACCAACCGGGACCAAAA 60.752 55.000 6.32 0.00 41.15 2.44
2820 3736 0.753848 ACACCAACCGGGACCAAAAG 60.754 55.000 6.32 0.00 41.15 2.27
2821 3737 1.152631 ACCAACCGGGACCAAAAGG 60.153 57.895 6.32 0.00 41.15 3.11
2822 3738 2.570284 CCAACCGGGACCAAAAGGC 61.570 63.158 6.32 0.00 40.01 4.35
2823 3739 1.830408 CAACCGGGACCAAAAGGCA 60.830 57.895 6.32 0.00 0.00 4.75
2824 3740 1.155155 AACCGGGACCAAAAGGCAT 59.845 52.632 6.32 0.00 0.00 4.40
2825 3741 0.898326 AACCGGGACCAAAAGGCATC 60.898 55.000 6.32 0.00 0.00 3.91
2826 3742 2.052104 CCGGGACCAAAAGGCATCC 61.052 63.158 0.00 0.00 0.00 3.51
2827 3743 1.304052 CGGGACCAAAAGGCATCCA 60.304 57.895 0.00 0.00 32.45 3.41
2828 3744 0.684153 CGGGACCAAAAGGCATCCAT 60.684 55.000 0.00 0.00 32.45 3.41
2829 3745 0.826062 GGGACCAAAAGGCATCCATG 59.174 55.000 0.00 0.00 32.45 3.66
2847 3763 3.340727 GCATCAGCATTTCAGTGGC 57.659 52.632 0.00 0.00 41.58 5.01
2848 3764 0.815734 GCATCAGCATTTCAGTGGCT 59.184 50.000 0.00 0.00 41.58 4.75
2852 3768 3.261250 AGCATTTCAGTGGCTGAGG 57.739 52.632 0.00 0.00 41.75 3.86
2853 3769 0.403271 AGCATTTCAGTGGCTGAGGT 59.597 50.000 0.00 0.00 41.75 3.85
2854 3770 1.202976 AGCATTTCAGTGGCTGAGGTT 60.203 47.619 0.00 0.00 41.75 3.50
2855 3771 1.615392 GCATTTCAGTGGCTGAGGTTT 59.385 47.619 0.00 0.00 41.75 3.27
2856 3772 2.036346 GCATTTCAGTGGCTGAGGTTTT 59.964 45.455 0.00 0.00 41.75 2.43
2857 3773 3.493176 GCATTTCAGTGGCTGAGGTTTTT 60.493 43.478 0.00 0.00 41.75 1.94
2858 3774 3.799281 TTTCAGTGGCTGAGGTTTTTG 57.201 42.857 0.00 0.00 41.75 2.44
2859 3775 2.435372 TCAGTGGCTGAGGTTTTTGT 57.565 45.000 0.00 0.00 35.39 2.83
2860 3776 2.733956 TCAGTGGCTGAGGTTTTTGTT 58.266 42.857 0.00 0.00 35.39 2.83
2861 3777 3.096092 TCAGTGGCTGAGGTTTTTGTTT 58.904 40.909 0.00 0.00 35.39 2.83
2862 3778 3.513515 TCAGTGGCTGAGGTTTTTGTTTT 59.486 39.130 0.00 0.00 35.39 2.43
2863 3779 4.020662 TCAGTGGCTGAGGTTTTTGTTTTT 60.021 37.500 0.00 0.00 35.39 1.94
2888 3804 3.726206 GGGGGAGGGTATAGGGGA 58.274 66.667 0.00 0.00 0.00 4.81
2889 3805 2.204037 GGGGGAGGGTATAGGGGAT 58.796 63.158 0.00 0.00 0.00 3.85
2890 3806 1.411741 GGGGGAGGGTATAGGGGATA 58.588 60.000 0.00 0.00 0.00 2.59
2891 3807 1.732247 GGGGGAGGGTATAGGGGATAA 59.268 57.143 0.00 0.00 0.00 1.75
2892 3808 2.324424 GGGGGAGGGTATAGGGGATAAT 59.676 54.545 0.00 0.00 0.00 1.28
2893 3809 3.247134 GGGGGAGGGTATAGGGGATAATT 60.247 52.174 0.00 0.00 0.00 1.40
2894 3810 4.455161 GGGGAGGGTATAGGGGATAATTT 58.545 47.826 0.00 0.00 0.00 1.82
2895 3811 5.525108 GGGGGAGGGTATAGGGGATAATTTA 60.525 48.000 0.00 0.00 0.00 1.40
2896 3812 5.670818 GGGGAGGGTATAGGGGATAATTTAG 59.329 48.000 0.00 0.00 0.00 1.85
2897 3813 5.670818 GGGAGGGTATAGGGGATAATTTAGG 59.329 48.000 0.00 0.00 0.00 2.69
2898 3814 5.670818 GGAGGGTATAGGGGATAATTTAGGG 59.329 48.000 0.00 0.00 0.00 3.53
2899 3815 6.270286 AGGGTATAGGGGATAATTTAGGGT 57.730 41.667 0.00 0.00 0.00 4.34
2900 3816 6.036631 AGGGTATAGGGGATAATTTAGGGTG 58.963 44.000 0.00 0.00 0.00 4.61
2901 3817 5.794289 GGGTATAGGGGATAATTTAGGGTGT 59.206 44.000 0.00 0.00 0.00 4.16
2902 3818 6.296836 GGGTATAGGGGATAATTTAGGGTGTG 60.297 46.154 0.00 0.00 0.00 3.82
2903 3819 6.273965 GGTATAGGGGATAATTTAGGGTGTGT 59.726 42.308 0.00 0.00 0.00 3.72
2904 3820 7.458806 GGTATAGGGGATAATTTAGGGTGTGTA 59.541 40.741 0.00 0.00 0.00 2.90
2905 3821 7.957929 ATAGGGGATAATTTAGGGTGTGTAA 57.042 36.000 0.00 0.00 0.00 2.41
2906 3822 6.262056 AGGGGATAATTTAGGGTGTGTAAG 57.738 41.667 0.00 0.00 0.00 2.34
2907 3823 4.825634 GGGGATAATTTAGGGTGTGTAAGC 59.174 45.833 0.00 0.00 0.00 3.09
2908 3824 5.398695 GGGGATAATTTAGGGTGTGTAAGCT 60.399 44.000 0.00 0.00 0.00 3.74
2909 3825 6.183361 GGGGATAATTTAGGGTGTGTAAGCTA 60.183 42.308 0.00 0.00 0.00 3.32
2910 3826 6.935208 GGGATAATTTAGGGTGTGTAAGCTAG 59.065 42.308 0.00 0.00 0.00 3.42
2911 3827 6.427242 GGATAATTTAGGGTGTGTAAGCTAGC 59.573 42.308 6.62 6.62 0.00 3.42
2912 3828 5.437191 AATTTAGGGTGTGTAAGCTAGCT 57.563 39.130 12.68 12.68 0.00 3.32
2913 3829 6.555463 AATTTAGGGTGTGTAAGCTAGCTA 57.445 37.500 19.70 0.00 0.00 3.32
2914 3830 6.555463 ATTTAGGGTGTGTAAGCTAGCTAA 57.445 37.500 19.70 4.02 0.00 3.09
2915 3831 3.889520 AGGGTGTGTAAGCTAGCTAAC 57.110 47.619 19.70 16.76 0.00 2.34
2916 3832 3.170717 AGGGTGTGTAAGCTAGCTAACA 58.829 45.455 19.70 19.12 0.00 2.41
2917 3833 3.195825 AGGGTGTGTAAGCTAGCTAACAG 59.804 47.826 19.70 0.00 0.00 3.16
2918 3834 3.194968 GGGTGTGTAAGCTAGCTAACAGA 59.805 47.826 19.70 1.96 0.00 3.41
2919 3835 4.425520 GGTGTGTAAGCTAGCTAACAGAG 58.574 47.826 19.70 0.00 0.00 3.35
2920 3836 4.158025 GGTGTGTAAGCTAGCTAACAGAGA 59.842 45.833 19.70 0.65 0.00 3.10
2921 3837 5.163499 GGTGTGTAAGCTAGCTAACAGAGAT 60.163 44.000 19.70 1.60 0.00 2.75
2922 3838 6.039493 GGTGTGTAAGCTAGCTAACAGAGATA 59.961 42.308 19.70 0.48 0.00 1.98
2923 3839 7.416438 GGTGTGTAAGCTAGCTAACAGAGATAA 60.416 40.741 19.70 0.00 0.00 1.75
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
580 588 3.187022 GCGTAGTTCACCGGTAATTTTGT 59.813 43.478 6.87 0.00 0.00 2.83
689 697 1.610363 GGCCTTGCCCTATTTAGAGC 58.390 55.000 0.00 0.00 44.06 4.09
719 727 0.037975 CATTGTTGCCTCTTGTGCCC 60.038 55.000 0.00 0.00 0.00 5.36
733 741 2.971598 CGGAGGAGGGTGCCATTGT 61.972 63.158 0.00 0.00 0.00 2.71
734 742 2.124570 CGGAGGAGGGTGCCATTG 60.125 66.667 0.00 0.00 0.00 2.82
739 747 2.046217 GGAAACGGAGGAGGGTGC 60.046 66.667 0.00 0.00 0.00 5.01
761 769 1.732917 CAGAGGAGTAGAGCAGCCG 59.267 63.158 0.00 0.00 0.00 5.52
766 774 1.613437 GAGGATGCAGAGGAGTAGAGC 59.387 57.143 0.00 0.00 0.00 4.09
771 779 1.380403 CGACGAGGATGCAGAGGAGT 61.380 60.000 0.00 0.00 0.00 3.85
779 787 2.969238 CATGGGCGACGAGGATGC 60.969 66.667 0.00 0.00 0.00 3.91
833 841 3.789290 GTGTTACGGCCGGGGGAT 61.789 66.667 31.76 10.73 0.00 3.85
844 852 3.406682 CGTAGGACGGTGGTGTTAC 57.593 57.895 0.00 0.00 38.08 2.50
863 871 4.106925 CTGCAGGAGGAGTGGCCC 62.107 72.222 5.57 0.00 37.37 5.80
899 907 1.078497 TACCATGTCGCCTTGGCAG 60.078 57.895 12.45 4.96 39.04 4.85
960 968 0.462225 TGACGTTCTTGAACCCGCAA 60.462 50.000 7.78 0.00 0.00 4.85
987 995 2.190578 GTCATGGCGGAGAAGGGG 59.809 66.667 0.00 0.00 0.00 4.79
1014 1022 0.108804 CCTTGAAGAGCGGCTCGTTA 60.109 55.000 23.15 14.85 35.36 3.18
1106 1116 1.650825 TGTAGTGGTACGCATGCATG 58.349 50.000 22.70 22.70 44.14 4.06
1175 1487 3.563508 CTGCACATACACATTCGCAAAA 58.436 40.909 0.00 0.00 0.00 2.44
1410 1746 2.049888 TGTCAATGATGCCCGCATTA 57.950 45.000 3.24 0.00 36.70 1.90
1459 1826 1.046472 ATGGTGACCGGCGGAATAGA 61.046 55.000 35.78 13.61 0.00 1.98
1465 1832 1.145156 TTATGATGGTGACCGGCGG 59.855 57.895 27.06 27.06 0.00 6.13
1466 1833 1.157870 GGTTATGATGGTGACCGGCG 61.158 60.000 0.00 0.00 0.00 6.46
1470 1837 3.194005 ACGATGGTTATGATGGTGACC 57.806 47.619 0.00 0.00 0.00 4.02
1549 2444 1.147824 CCCTGCAGAGCCATACCAG 59.852 63.158 17.39 0.00 0.00 4.00
1794 2710 4.722700 GACCCCTGCATGCGGTGT 62.723 66.667 24.56 20.16 0.00 4.16
1810 2726 0.721154 GTGATGCGCAACGAGAATGA 59.279 50.000 17.11 0.00 0.00 2.57
1856 2772 4.530857 CGGGGATGACCTGGTCGC 62.531 72.222 21.15 15.26 42.34 5.19
1887 2803 3.321111 TGACGGAGCTGTAGACTTTTTCT 59.679 43.478 0.00 0.00 38.51 2.52
1995 2911 9.860393 ATATAACCCTACTCCTCTTTCCATTAT 57.140 33.333 0.00 0.00 0.00 1.28
2020 2936 2.037772 GCCCGTCTCATGAGGTCATTAT 59.962 50.000 22.42 0.00 33.61 1.28
2232 3148 9.685276 TTCATGTACCTTTGAGAATATTCATGT 57.315 29.630 17.56 7.31 33.27 3.21
2233 3149 9.941664 GTTCATGTACCTTTGAGAATATTCATG 57.058 33.333 17.56 8.71 0.00 3.07
2234 3150 9.685276 TGTTCATGTACCTTTGAGAATATTCAT 57.315 29.630 17.56 2.94 0.00 2.57
2235 3151 9.685276 ATGTTCATGTACCTTTGAGAATATTCA 57.315 29.630 17.56 0.00 0.00 2.57
2378 3294 9.323985 GCCCATTTAGCATTGTTCATATTTAAA 57.676 29.630 0.00 0.00 0.00 1.52
2379 3295 7.930865 GGCCCATTTAGCATTGTTCATATTTAA 59.069 33.333 0.00 0.00 0.00 1.52
2380 3296 7.441017 GGCCCATTTAGCATTGTTCATATTTA 58.559 34.615 0.00 0.00 0.00 1.40
2381 3297 6.290605 GGCCCATTTAGCATTGTTCATATTT 58.709 36.000 0.00 0.00 0.00 1.40
2382 3298 5.509501 CGGCCCATTTAGCATTGTTCATATT 60.510 40.000 0.00 0.00 0.00 1.28
2383 3299 4.022068 CGGCCCATTTAGCATTGTTCATAT 60.022 41.667 0.00 0.00 0.00 1.78
2384 3300 3.317711 CGGCCCATTTAGCATTGTTCATA 59.682 43.478 0.00 0.00 0.00 2.15
2385 3301 2.101249 CGGCCCATTTAGCATTGTTCAT 59.899 45.455 0.00 0.00 0.00 2.57
2386 3302 1.476085 CGGCCCATTTAGCATTGTTCA 59.524 47.619 0.00 0.00 0.00 3.18
2387 3303 1.802508 GCGGCCCATTTAGCATTGTTC 60.803 52.381 0.00 0.00 0.00 3.18
2388 3304 0.175531 GCGGCCCATTTAGCATTGTT 59.824 50.000 0.00 0.00 0.00 2.83
2389 3305 0.969917 TGCGGCCCATTTAGCATTGT 60.970 50.000 0.00 0.00 34.39 2.71
2390 3306 0.528249 GTGCGGCCCATTTAGCATTG 60.528 55.000 3.99 0.00 41.88 2.82
2391 3307 0.684153 AGTGCGGCCCATTTAGCATT 60.684 50.000 3.99 0.00 41.88 3.56
2392 3308 1.076777 AGTGCGGCCCATTTAGCAT 60.077 52.632 3.99 0.00 41.88 3.79
2393 3309 2.045708 CAGTGCGGCCCATTTAGCA 61.046 57.895 0.00 0.00 37.26 3.49
2394 3310 2.774799 CCAGTGCGGCCCATTTAGC 61.775 63.158 0.00 0.00 0.00 3.09
2395 3311 0.965363 AACCAGTGCGGCCCATTTAG 60.965 55.000 0.00 0.00 39.03 1.85
2396 3312 0.963355 GAACCAGTGCGGCCCATTTA 60.963 55.000 0.00 0.00 39.03 1.40
2397 3313 2.203625 AACCAGTGCGGCCCATTT 60.204 55.556 0.00 0.00 39.03 2.32
2398 3314 2.676471 GAACCAGTGCGGCCCATT 60.676 61.111 0.00 0.00 39.03 3.16
2399 3315 4.740822 GGAACCAGTGCGGCCCAT 62.741 66.667 0.00 0.00 39.03 4.00
2401 3317 4.966787 TTGGAACCAGTGCGGCCC 62.967 66.667 0.00 0.00 39.03 5.80
2402 3318 3.670377 GTTGGAACCAGTGCGGCC 61.670 66.667 0.00 0.00 39.03 6.13
2412 3328 5.537188 TGTGCTATTCAAATTGGTTGGAAC 58.463 37.500 0.00 0.00 37.85 3.62
2413 3329 5.798125 TGTGCTATTCAAATTGGTTGGAA 57.202 34.783 0.00 0.00 37.85 3.53
2414 3330 5.782047 CTTGTGCTATTCAAATTGGTTGGA 58.218 37.500 0.00 0.00 37.85 3.53
2415 3331 4.389687 GCTTGTGCTATTCAAATTGGTTGG 59.610 41.667 0.00 0.00 35.58 3.77
2416 3332 5.520022 GCTTGTGCTATTCAAATTGGTTG 57.480 39.130 0.00 0.00 35.93 3.77
2425 3341 8.601352 TGTGGAACTAAAAGCTTGTGCTATTCA 61.601 37.037 0.00 0.00 43.86 2.57
2426 3342 6.293955 TGTGGAACTAAAAGCTTGTGCTATTC 60.294 38.462 0.00 0.00 43.86 1.75
2427 3343 5.534654 TGTGGAACTAAAAGCTTGTGCTATT 59.465 36.000 0.00 0.00 43.86 1.73
2428 3344 5.070001 TGTGGAACTAAAAGCTTGTGCTAT 58.930 37.500 0.00 0.00 43.86 2.97
2429 3345 4.456535 TGTGGAACTAAAAGCTTGTGCTA 58.543 39.130 0.00 0.00 43.86 3.49
2430 3346 3.287222 TGTGGAACTAAAAGCTTGTGCT 58.713 40.909 0.00 0.00 45.78 4.40
2431 3347 3.066760 ACTGTGGAACTAAAAGCTTGTGC 59.933 43.478 0.00 0.00 38.04 4.57
2432 3348 4.900635 ACTGTGGAACTAAAAGCTTGTG 57.099 40.909 0.00 0.00 38.04 3.33
2433 3349 5.433526 TGTACTGTGGAACTAAAAGCTTGT 58.566 37.500 0.00 0.00 38.04 3.16
2434 3350 6.560253 ATGTACTGTGGAACTAAAAGCTTG 57.440 37.500 0.00 0.00 38.04 4.01
2435 3351 8.685838 TTAATGTACTGTGGAACTAAAAGCTT 57.314 30.769 0.00 0.00 38.04 3.74
2436 3352 8.685838 TTTAATGTACTGTGGAACTAAAAGCT 57.314 30.769 0.00 0.00 38.04 3.74
2437 3353 9.177304 GTTTTAATGTACTGTGGAACTAAAAGC 57.823 33.333 0.00 0.00 38.04 3.51
2442 3358 9.715121 CCTTAGTTTTAATGTACTGTGGAACTA 57.285 33.333 0.00 1.63 38.04 2.24
2443 3359 7.664318 CCCTTAGTTTTAATGTACTGTGGAACT 59.336 37.037 0.00 2.54 38.04 3.01
2444 3360 7.094506 CCCCTTAGTTTTAATGTACTGTGGAAC 60.095 40.741 0.00 0.00 37.35 3.62
2445 3361 6.943718 CCCCTTAGTTTTAATGTACTGTGGAA 59.056 38.462 0.00 0.00 0.00 3.53
2446 3362 6.478129 CCCCTTAGTTTTAATGTACTGTGGA 58.522 40.000 0.00 0.00 0.00 4.02
2447 3363 5.124936 GCCCCTTAGTTTTAATGTACTGTGG 59.875 44.000 0.00 0.00 0.00 4.17
2448 3364 5.124936 GGCCCCTTAGTTTTAATGTACTGTG 59.875 44.000 0.00 0.00 0.00 3.66
2449 3365 5.222171 TGGCCCCTTAGTTTTAATGTACTGT 60.222 40.000 0.00 0.00 0.00 3.55
2450 3366 5.258051 TGGCCCCTTAGTTTTAATGTACTG 58.742 41.667 0.00 0.00 0.00 2.74
2451 3367 5.523883 TGGCCCCTTAGTTTTAATGTACT 57.476 39.130 0.00 0.00 0.00 2.73
2452 3368 6.209986 ACTTTGGCCCCTTAGTTTTAATGTAC 59.790 38.462 0.00 0.00 0.00 2.90
2453 3369 6.316513 ACTTTGGCCCCTTAGTTTTAATGTA 58.683 36.000 0.00 0.00 0.00 2.29
2454 3370 5.152193 ACTTTGGCCCCTTAGTTTTAATGT 58.848 37.500 0.00 0.00 0.00 2.71
2455 3371 5.738619 ACTTTGGCCCCTTAGTTTTAATG 57.261 39.130 0.00 0.00 0.00 1.90
2456 3372 5.955959 CCTACTTTGGCCCCTTAGTTTTAAT 59.044 40.000 0.00 0.00 0.00 1.40
2457 3373 5.326900 CCTACTTTGGCCCCTTAGTTTTAA 58.673 41.667 0.00 0.00 0.00 1.52
2458 3374 4.811752 GCCTACTTTGGCCCCTTAGTTTTA 60.812 45.833 0.00 0.00 46.82 1.52
2459 3375 3.774734 CCTACTTTGGCCCCTTAGTTTT 58.225 45.455 0.00 0.00 0.00 2.43
2460 3376 2.556782 GCCTACTTTGGCCCCTTAGTTT 60.557 50.000 0.00 0.00 46.82 2.66
2461 3377 1.005569 GCCTACTTTGGCCCCTTAGTT 59.994 52.381 0.00 0.00 46.82 2.24
2462 3378 0.624254 GCCTACTTTGGCCCCTTAGT 59.376 55.000 0.00 0.44 46.82 2.24
2463 3379 3.496675 GCCTACTTTGGCCCCTTAG 57.503 57.895 0.00 0.00 46.82 2.18
2471 3387 7.495934 CCGGATAGATTTATATGCCTACTTTGG 59.504 40.741 0.00 0.00 0.00 3.28
2472 3388 8.041323 ACCGGATAGATTTATATGCCTACTTTG 58.959 37.037 9.46 0.00 0.00 2.77
2473 3389 8.041323 CACCGGATAGATTTATATGCCTACTTT 58.959 37.037 9.46 0.00 0.00 2.66
2474 3390 7.364762 CCACCGGATAGATTTATATGCCTACTT 60.365 40.741 9.46 0.00 0.00 2.24
2475 3391 6.098409 CCACCGGATAGATTTATATGCCTACT 59.902 42.308 9.46 0.00 0.00 2.57
2476 3392 6.097839 TCCACCGGATAGATTTATATGCCTAC 59.902 42.308 9.46 0.00 0.00 3.18
2477 3393 6.199376 TCCACCGGATAGATTTATATGCCTA 58.801 40.000 9.46 0.00 0.00 3.93
2478 3394 5.030147 TCCACCGGATAGATTTATATGCCT 58.970 41.667 9.46 0.00 0.00 4.75
2479 3395 5.104900 ACTCCACCGGATAGATTTATATGCC 60.105 44.000 9.46 0.00 0.00 4.40
2480 3396 5.812642 CACTCCACCGGATAGATTTATATGC 59.187 44.000 9.46 0.00 0.00 3.14
2481 3397 6.341316 CCACTCCACCGGATAGATTTATATG 58.659 44.000 9.46 0.00 0.00 1.78
2482 3398 5.104900 GCCACTCCACCGGATAGATTTATAT 60.105 44.000 9.46 0.00 0.00 0.86
2483 3399 4.222145 GCCACTCCACCGGATAGATTTATA 59.778 45.833 9.46 0.00 0.00 0.98
2484 3400 3.008049 GCCACTCCACCGGATAGATTTAT 59.992 47.826 9.46 0.00 0.00 1.40
2485 3401 2.367567 GCCACTCCACCGGATAGATTTA 59.632 50.000 9.46 0.00 0.00 1.40
2486 3402 1.141053 GCCACTCCACCGGATAGATTT 59.859 52.381 9.46 0.00 0.00 2.17
2487 3403 0.759346 GCCACTCCACCGGATAGATT 59.241 55.000 9.46 0.00 0.00 2.40
2488 3404 0.105453 AGCCACTCCACCGGATAGAT 60.105 55.000 9.46 0.00 0.00 1.98
2489 3405 0.554305 TAGCCACTCCACCGGATAGA 59.446 55.000 9.46 0.00 0.00 1.98
2490 3406 0.962489 CTAGCCACTCCACCGGATAG 59.038 60.000 9.46 4.49 35.13 2.08
2491 3407 1.113517 GCTAGCCACTCCACCGGATA 61.114 60.000 9.46 0.00 0.00 2.59
2492 3408 2.435693 GCTAGCCACTCCACCGGAT 61.436 63.158 9.46 0.00 0.00 4.18
2493 3409 3.075005 GCTAGCCACTCCACCGGA 61.075 66.667 9.46 0.00 0.00 5.14
2494 3410 1.399744 TATGCTAGCCACTCCACCGG 61.400 60.000 13.29 0.00 0.00 5.28
2495 3411 0.032678 CTATGCTAGCCACTCCACCG 59.967 60.000 13.29 0.00 0.00 4.94
2496 3412 0.250081 GCTATGCTAGCCACTCCACC 60.250 60.000 13.29 0.00 45.95 4.61
2497 3413 3.297391 GCTATGCTAGCCACTCCAC 57.703 57.895 13.29 0.00 45.95 4.02
2506 3422 0.661780 GCGTGGTCGAGCTATGCTAG 60.662 60.000 16.64 0.00 39.88 3.42
2507 3423 1.101635 AGCGTGGTCGAGCTATGCTA 61.102 55.000 23.13 0.00 46.96 3.49
2508 3424 2.105128 GCGTGGTCGAGCTATGCT 59.895 61.111 16.64 0.00 43.88 3.79
2509 3425 1.359117 TAGCGTGGTCGAGCTATGC 59.641 57.895 16.64 17.30 44.15 3.14
2513 3429 0.101399 CTCAATAGCGTGGTCGAGCT 59.899 55.000 16.64 9.17 46.53 4.09
2514 3430 0.179134 ACTCAATAGCGTGGTCGAGC 60.179 55.000 7.89 7.89 39.71 5.03
2515 3431 2.186076 GAACTCAATAGCGTGGTCGAG 58.814 52.381 0.00 0.00 39.71 4.04
2516 3432 1.542472 TGAACTCAATAGCGTGGTCGA 59.458 47.619 0.00 0.00 39.71 4.20
2517 3433 1.654105 GTGAACTCAATAGCGTGGTCG 59.346 52.381 0.00 0.00 40.37 4.79
2518 3434 2.412089 GTGTGAACTCAATAGCGTGGTC 59.588 50.000 0.00 0.00 0.00 4.02
2519 3435 2.037251 AGTGTGAACTCAATAGCGTGGT 59.963 45.455 0.00 0.00 0.00 4.16
2520 3436 2.688507 AGTGTGAACTCAATAGCGTGG 58.311 47.619 0.00 0.00 0.00 4.94
2521 3437 3.181540 CGAAGTGTGAACTCAATAGCGTG 60.182 47.826 0.00 0.00 0.00 5.34
2522 3438 2.987149 CGAAGTGTGAACTCAATAGCGT 59.013 45.455 0.00 0.00 0.00 5.07
2523 3439 3.242518 TCGAAGTGTGAACTCAATAGCG 58.757 45.455 0.00 0.00 0.00 4.26
2524 3440 4.143094 GGTTCGAAGTGTGAACTCAATAGC 60.143 45.833 0.00 0.00 44.02 2.97
2525 3441 5.230942 AGGTTCGAAGTGTGAACTCAATAG 58.769 41.667 0.00 0.00 44.02 1.73
2526 3442 5.209818 AGGTTCGAAGTGTGAACTCAATA 57.790 39.130 0.00 0.00 44.02 1.90
2527 3443 4.073293 AGGTTCGAAGTGTGAACTCAAT 57.927 40.909 0.00 0.00 44.02 2.57
2528 3444 3.536956 AGGTTCGAAGTGTGAACTCAA 57.463 42.857 0.00 0.00 44.02 3.02
2529 3445 3.194861 CAAGGTTCGAAGTGTGAACTCA 58.805 45.455 0.00 0.00 44.02 3.41
2530 3446 2.544267 CCAAGGTTCGAAGTGTGAACTC 59.456 50.000 0.00 0.00 44.02 3.01
2531 3447 2.561569 CCAAGGTTCGAAGTGTGAACT 58.438 47.619 0.00 0.00 44.02 3.01
2532 3448 1.002792 GCCAAGGTTCGAAGTGTGAAC 60.003 52.381 0.00 0.00 43.87 3.18
2533 3449 1.305201 GCCAAGGTTCGAAGTGTGAA 58.695 50.000 0.00 0.00 0.00 3.18
2534 3450 0.878523 CGCCAAGGTTCGAAGTGTGA 60.879 55.000 0.00 0.00 0.00 3.58
2535 3451 1.157870 ACGCCAAGGTTCGAAGTGTG 61.158 55.000 0.00 0.00 0.00 3.82
2536 3452 0.463116 AACGCCAAGGTTCGAAGTGT 60.463 50.000 0.00 0.00 0.00 3.55
2537 3453 0.661020 AAACGCCAAGGTTCGAAGTG 59.339 50.000 0.00 0.00 0.00 3.16
2538 3454 1.869132 GTAAACGCCAAGGTTCGAAGT 59.131 47.619 0.00 0.00 0.00 3.01
2539 3455 1.196127 GGTAAACGCCAAGGTTCGAAG 59.804 52.381 0.00 0.00 0.00 3.79
2540 3456 1.228533 GGTAAACGCCAAGGTTCGAA 58.771 50.000 0.00 0.00 0.00 3.71
2541 3457 0.106335 TGGTAAACGCCAAGGTTCGA 59.894 50.000 0.00 0.00 35.25 3.71
2542 3458 1.161843 ATGGTAAACGCCAAGGTTCG 58.838 50.000 0.00 0.00 42.48 3.95
2543 3459 3.653539 AAATGGTAAACGCCAAGGTTC 57.346 42.857 0.00 0.00 42.48 3.62
2544 3460 4.409718 AAAAATGGTAAACGCCAAGGTT 57.590 36.364 0.00 0.00 42.48 3.50
2566 3482 9.692749 CTGTCAGTACATGAGAAAACTTAAGTA 57.307 33.333 8.92 0.00 39.07 2.24
2567 3483 8.421784 TCTGTCAGTACATGAGAAAACTTAAGT 58.578 33.333 1.12 1.12 39.07 2.24
2568 3484 8.704234 GTCTGTCAGTACATGAGAAAACTTAAG 58.296 37.037 0.00 0.00 39.07 1.85
2569 3485 8.201464 TGTCTGTCAGTACATGAGAAAACTTAA 58.799 33.333 0.00 0.00 39.07 1.85
2570 3486 7.652105 GTGTCTGTCAGTACATGAGAAAACTTA 59.348 37.037 0.00 0.00 39.07 2.24
2571 3487 6.480320 GTGTCTGTCAGTACATGAGAAAACTT 59.520 38.462 0.00 0.00 39.07 2.66
2572 3488 5.986135 GTGTCTGTCAGTACATGAGAAAACT 59.014 40.000 0.00 0.00 39.07 2.66
2573 3489 5.107837 CGTGTCTGTCAGTACATGAGAAAAC 60.108 44.000 14.54 0.00 39.07 2.43
2574 3490 4.982295 CGTGTCTGTCAGTACATGAGAAAA 59.018 41.667 14.54 0.00 39.07 2.29
2575 3491 4.277423 TCGTGTCTGTCAGTACATGAGAAA 59.723 41.667 16.75 3.30 39.07 2.52
2576 3492 3.818773 TCGTGTCTGTCAGTACATGAGAA 59.181 43.478 16.75 3.54 39.07 2.87
2577 3493 3.188667 GTCGTGTCTGTCAGTACATGAGA 59.811 47.826 19.26 11.96 41.12 3.27
2578 3494 3.189495 AGTCGTGTCTGTCAGTACATGAG 59.811 47.826 19.26 10.58 41.12 2.90
2579 3495 3.146847 AGTCGTGTCTGTCAGTACATGA 58.853 45.455 16.75 16.75 38.87 3.07
2580 3496 3.058224 TGAGTCGTGTCTGTCAGTACATG 60.058 47.826 13.93 13.93 34.37 3.21
2581 3497 3.058155 GTGAGTCGTGTCTGTCAGTACAT 60.058 47.826 0.00 0.00 34.37 2.29
2582 3498 2.289820 GTGAGTCGTGTCTGTCAGTACA 59.710 50.000 0.00 0.70 0.00 2.90
2583 3499 2.548904 AGTGAGTCGTGTCTGTCAGTAC 59.451 50.000 0.00 0.26 0.00 2.73
2584 3500 2.847441 AGTGAGTCGTGTCTGTCAGTA 58.153 47.619 0.00 0.00 0.00 2.74
2585 3501 1.681538 AGTGAGTCGTGTCTGTCAGT 58.318 50.000 0.00 0.00 0.00 3.41
2586 3502 2.223595 ACAAGTGAGTCGTGTCTGTCAG 60.224 50.000 0.00 0.00 33.86 3.51
2587 3503 1.749063 ACAAGTGAGTCGTGTCTGTCA 59.251 47.619 0.00 0.00 33.86 3.58
2588 3504 2.386249 GACAAGTGAGTCGTGTCTGTC 58.614 52.381 12.00 5.08 46.57 3.51
2589 3505 2.493713 GACAAGTGAGTCGTGTCTGT 57.506 50.000 12.00 0.05 46.57 3.41
2593 3509 2.362397 AGTGATGACAAGTGAGTCGTGT 59.638 45.455 0.00 0.00 41.41 4.49
2594 3510 3.018598 AGTGATGACAAGTGAGTCGTG 57.981 47.619 0.00 0.00 41.41 4.35
2595 3511 3.821600 ACTAGTGATGACAAGTGAGTCGT 59.178 43.478 0.00 0.00 41.41 4.34
2596 3512 4.427096 ACTAGTGATGACAAGTGAGTCG 57.573 45.455 0.00 0.00 41.41 4.18
2597 3513 6.745159 TCTACTAGTGATGACAAGTGAGTC 57.255 41.667 5.39 0.00 38.99 3.36
2598 3514 7.526142 TTTCTACTAGTGATGACAAGTGAGT 57.474 36.000 5.39 0.00 0.00 3.41
2599 3515 8.818141 TTTTTCTACTAGTGATGACAAGTGAG 57.182 34.615 5.39 0.00 0.00 3.51
2600 3516 7.872993 CCTTTTTCTACTAGTGATGACAAGTGA 59.127 37.037 5.39 0.00 0.00 3.41
2601 3517 7.872993 TCCTTTTTCTACTAGTGATGACAAGTG 59.127 37.037 5.39 2.44 0.00 3.16
2602 3518 7.963532 TCCTTTTTCTACTAGTGATGACAAGT 58.036 34.615 5.39 0.00 0.00 3.16
2603 3519 9.092876 GATCCTTTTTCTACTAGTGATGACAAG 57.907 37.037 5.39 6.20 0.00 3.16
2604 3520 8.593679 TGATCCTTTTTCTACTAGTGATGACAA 58.406 33.333 5.39 0.00 0.00 3.18
2605 3521 8.134202 TGATCCTTTTTCTACTAGTGATGACA 57.866 34.615 5.39 0.00 0.00 3.58
2606 3522 9.255304 GATGATCCTTTTTCTACTAGTGATGAC 57.745 37.037 5.39 0.00 0.00 3.06
2607 3523 9.206690 AGATGATCCTTTTTCTACTAGTGATGA 57.793 33.333 5.39 0.00 0.00 2.92
2608 3524 9.258826 CAGATGATCCTTTTTCTACTAGTGATG 57.741 37.037 5.39 0.00 0.00 3.07
2609 3525 8.986991 ACAGATGATCCTTTTTCTACTAGTGAT 58.013 33.333 5.39 0.00 0.00 3.06
2610 3526 8.367660 ACAGATGATCCTTTTTCTACTAGTGA 57.632 34.615 5.39 0.00 0.00 3.41
2611 3527 7.708752 GGACAGATGATCCTTTTTCTACTAGTG 59.291 40.741 5.39 0.00 33.03 2.74
2612 3528 7.147637 GGGACAGATGATCCTTTTTCTACTAGT 60.148 40.741 0.00 0.00 36.40 2.57
2613 3529 7.213678 GGGACAGATGATCCTTTTTCTACTAG 58.786 42.308 0.00 0.00 36.40 2.57
2614 3530 6.183360 CGGGACAGATGATCCTTTTTCTACTA 60.183 42.308 0.00 0.00 36.40 1.82
2615 3531 5.395768 CGGGACAGATGATCCTTTTTCTACT 60.396 44.000 0.00 0.00 36.40 2.57
2616 3532 4.811557 CGGGACAGATGATCCTTTTTCTAC 59.188 45.833 0.00 0.00 36.40 2.59
2617 3533 4.141711 CCGGGACAGATGATCCTTTTTCTA 60.142 45.833 0.00 0.00 36.40 2.10
2618 3534 3.370953 CCGGGACAGATGATCCTTTTTCT 60.371 47.826 0.00 0.00 36.40 2.52
2619 3535 2.945668 CCGGGACAGATGATCCTTTTTC 59.054 50.000 0.00 0.00 36.40 2.29
2620 3536 2.308866 ACCGGGACAGATGATCCTTTTT 59.691 45.455 6.32 0.00 36.40 1.94
2621 3537 1.916181 ACCGGGACAGATGATCCTTTT 59.084 47.619 6.32 0.00 36.40 2.27
2622 3538 1.584724 ACCGGGACAGATGATCCTTT 58.415 50.000 6.32 0.00 36.40 3.11
2623 3539 1.210478 CAACCGGGACAGATGATCCTT 59.790 52.381 6.32 0.00 36.40 3.36
2624 3540 0.833287 CAACCGGGACAGATGATCCT 59.167 55.000 6.32 0.00 36.40 3.24
2625 3541 0.179045 CCAACCGGGACAGATGATCC 60.179 60.000 6.32 0.00 40.01 3.36
2626 3542 0.541863 ACCAACCGGGACAGATGATC 59.458 55.000 6.32 0.00 41.15 2.92
2627 3543 1.874129 TACCAACCGGGACAGATGAT 58.126 50.000 6.32 0.00 41.15 2.45
2628 3544 1.553248 CTTACCAACCGGGACAGATGA 59.447 52.381 6.32 0.00 41.15 2.92
2629 3545 1.406887 CCTTACCAACCGGGACAGATG 60.407 57.143 6.32 0.00 41.15 2.90
2630 3546 0.909623 CCTTACCAACCGGGACAGAT 59.090 55.000 6.32 0.00 41.15 2.90
2631 3547 1.196104 CCCTTACCAACCGGGACAGA 61.196 60.000 6.32 0.00 40.55 3.41
2632 3548 1.298667 CCCTTACCAACCGGGACAG 59.701 63.158 6.32 0.00 40.55 3.51
2633 3549 2.897762 GCCCTTACCAACCGGGACA 61.898 63.158 6.32 0.00 40.55 4.02
2634 3550 2.045634 GCCCTTACCAACCGGGAC 60.046 66.667 6.32 0.00 40.55 4.46
2635 3551 3.332385 GGCCCTTACCAACCGGGA 61.332 66.667 6.32 0.00 40.55 5.14
2636 3552 2.435120 AAAGGCCCTTACCAACCGGG 62.435 60.000 6.32 0.00 44.81 5.73
2637 3553 0.541063 AAAAGGCCCTTACCAACCGG 60.541 55.000 0.00 0.00 38.77 5.28
2638 3554 0.601057 CAAAAGGCCCTTACCAACCG 59.399 55.000 0.00 0.00 0.00 4.44
2639 3555 1.616865 GACAAAAGGCCCTTACCAACC 59.383 52.381 0.00 0.00 0.00 3.77
2640 3556 1.616865 GGACAAAAGGCCCTTACCAAC 59.383 52.381 0.00 0.00 0.00 3.77
2641 3557 1.481615 GGGACAAAAGGCCCTTACCAA 60.482 52.381 0.00 0.00 41.31 3.67
2642 3558 0.113580 GGGACAAAAGGCCCTTACCA 59.886 55.000 0.00 0.00 41.31 3.25
2643 3559 0.963856 CGGGACAAAAGGCCCTTACC 60.964 60.000 4.64 0.00 42.40 2.85
2644 3560 0.963856 CCGGGACAAAAGGCCCTTAC 60.964 60.000 4.64 0.00 42.40 2.34
2645 3561 1.381076 CCGGGACAAAAGGCCCTTA 59.619 57.895 4.64 0.00 42.40 2.69
2646 3562 2.117423 CCGGGACAAAAGGCCCTT 59.883 61.111 4.64 0.00 42.40 3.95
2647 3563 2.774633 AACCGGGACAAAAGGCCCT 61.775 57.895 6.32 0.00 42.40 5.19
2648 3564 2.203582 AACCGGGACAAAAGGCCC 60.204 61.111 6.32 0.00 41.11 5.80
2649 3565 1.396607 AACAACCGGGACAAAAGGCC 61.397 55.000 6.32 0.00 0.00 5.19
2650 3566 0.249280 CAACAACCGGGACAAAAGGC 60.249 55.000 6.32 0.00 0.00 4.35
2651 3567 1.394618 TCAACAACCGGGACAAAAGG 58.605 50.000 6.32 0.00 0.00 3.11
2652 3568 3.638484 GATTCAACAACCGGGACAAAAG 58.362 45.455 6.32 0.00 0.00 2.27
2653 3569 2.033550 CGATTCAACAACCGGGACAAAA 59.966 45.455 6.32 0.00 0.00 2.44
2654 3570 1.604755 CGATTCAACAACCGGGACAAA 59.395 47.619 6.32 0.00 0.00 2.83
2655 3571 1.231221 CGATTCAACAACCGGGACAA 58.769 50.000 6.32 0.00 0.00 3.18
2656 3572 0.604243 CCGATTCAACAACCGGGACA 60.604 55.000 6.32 0.00 38.42 4.02
2657 3573 2.168054 CCGATTCAACAACCGGGAC 58.832 57.895 6.32 0.00 38.42 4.46
2658 3574 4.705746 CCGATTCAACAACCGGGA 57.294 55.556 6.32 0.00 38.42 5.14
2660 3576 2.696759 GCCCCGATTCAACAACCGG 61.697 63.158 0.00 0.00 41.47 5.28
2661 3577 0.391927 TAGCCCCGATTCAACAACCG 60.392 55.000 0.00 0.00 0.00 4.44
2662 3578 1.828979 TTAGCCCCGATTCAACAACC 58.171 50.000 0.00 0.00 0.00 3.77
2663 3579 2.163613 CCTTTAGCCCCGATTCAACAAC 59.836 50.000 0.00 0.00 0.00 3.32
2664 3580 2.442413 CCTTTAGCCCCGATTCAACAA 58.558 47.619 0.00 0.00 0.00 2.83
2665 3581 1.340600 CCCTTTAGCCCCGATTCAACA 60.341 52.381 0.00 0.00 0.00 3.33
2666 3582 1.340697 ACCCTTTAGCCCCGATTCAAC 60.341 52.381 0.00 0.00 0.00 3.18
2667 3583 0.996583 ACCCTTTAGCCCCGATTCAA 59.003 50.000 0.00 0.00 0.00 2.69
2668 3584 0.544697 GACCCTTTAGCCCCGATTCA 59.455 55.000 0.00 0.00 0.00 2.57
2669 3585 0.532196 CGACCCTTTAGCCCCGATTC 60.532 60.000 0.00 0.00 0.00 2.52
2670 3586 1.269703 ACGACCCTTTAGCCCCGATT 61.270 55.000 0.00 0.00 0.00 3.34
2671 3587 1.269703 AACGACCCTTTAGCCCCGAT 61.270 55.000 0.00 0.00 0.00 4.18
2672 3588 0.614415 TAACGACCCTTTAGCCCCGA 60.614 55.000 0.00 0.00 0.00 5.14
2673 3589 0.460811 GTAACGACCCTTTAGCCCCG 60.461 60.000 0.00 0.00 0.00 5.73
2674 3590 0.907486 AGTAACGACCCTTTAGCCCC 59.093 55.000 0.00 0.00 0.00 5.80
2675 3591 3.893326 TTAGTAACGACCCTTTAGCCC 57.107 47.619 0.00 0.00 0.00 5.19
2676 3592 3.558829 GCATTAGTAACGACCCTTTAGCC 59.441 47.826 0.00 0.00 0.00 3.93
2677 3593 3.558829 GGCATTAGTAACGACCCTTTAGC 59.441 47.826 0.00 0.00 0.00 3.09
2678 3594 4.124970 GGGCATTAGTAACGACCCTTTAG 58.875 47.826 8.75 0.00 34.34 1.85
2679 3595 3.776417 AGGGCATTAGTAACGACCCTTTA 59.224 43.478 11.72 0.00 45.55 1.85
2680 3596 2.574824 AGGGCATTAGTAACGACCCTTT 59.425 45.455 11.72 0.00 45.55 3.11
2681 3597 2.193993 AGGGCATTAGTAACGACCCTT 58.806 47.619 11.72 0.48 45.55 3.95
2682 3598 1.875488 AGGGCATTAGTAACGACCCT 58.125 50.000 11.72 11.72 42.97 4.34
2683 3599 2.547430 GCTAGGGCATTAGTAACGACCC 60.547 54.545 0.00 3.07 38.54 4.46
2684 3600 2.547430 GGCTAGGGCATTAGTAACGACC 60.547 54.545 0.00 0.00 40.87 4.79
2685 3601 2.547430 GGGCTAGGGCATTAGTAACGAC 60.547 54.545 0.00 0.00 40.87 4.34
2686 3602 1.690352 GGGCTAGGGCATTAGTAACGA 59.310 52.381 0.00 0.00 40.87 3.85
2687 3603 1.692519 AGGGCTAGGGCATTAGTAACG 59.307 52.381 0.00 0.00 40.87 3.18
2688 3604 3.859061 AAGGGCTAGGGCATTAGTAAC 57.141 47.619 0.00 0.00 40.87 2.50
2689 3605 4.973211 ACTAAAGGGCTAGGGCATTAGTAA 59.027 41.667 14.68 0.00 39.59 2.24
2690 3606 4.563782 ACTAAAGGGCTAGGGCATTAGTA 58.436 43.478 14.68 0.00 39.59 1.82
2691 3607 3.391626 GACTAAAGGGCTAGGGCATTAGT 59.608 47.826 15.56 15.56 41.69 2.24
2692 3608 3.244596 GGACTAAAGGGCTAGGGCATTAG 60.245 52.174 11.36 11.36 40.87 1.73
2693 3609 2.709397 GGACTAAAGGGCTAGGGCATTA 59.291 50.000 0.00 0.00 40.87 1.90
2694 3610 1.495148 GGACTAAAGGGCTAGGGCATT 59.505 52.381 0.00 0.00 40.87 3.56
2695 3611 1.141185 GGACTAAAGGGCTAGGGCAT 58.859 55.000 0.00 0.00 40.87 4.40
2696 3612 0.986550 GGGACTAAAGGGCTAGGGCA 60.987 60.000 0.00 0.00 40.87 5.36
2697 3613 1.837789 GGGACTAAAGGGCTAGGGC 59.162 63.158 0.00 0.00 37.82 5.19
2698 3614 1.408453 CCGGGACTAAAGGGCTAGGG 61.408 65.000 0.00 0.00 0.00 3.53
2699 3615 0.690077 ACCGGGACTAAAGGGCTAGG 60.690 60.000 6.32 0.00 0.00 3.02
2700 3616 1.138464 GAACCGGGACTAAAGGGCTAG 59.862 57.143 6.32 0.00 0.00 3.42
2701 3617 1.197812 GAACCGGGACTAAAGGGCTA 58.802 55.000 6.32 0.00 0.00 3.93
2702 3618 0.546988 AGAACCGGGACTAAAGGGCT 60.547 55.000 6.32 0.00 0.00 5.19
2703 3619 0.327259 AAGAACCGGGACTAAAGGGC 59.673 55.000 6.32 0.00 0.00 5.19
2704 3620 2.568509 TGTAAGAACCGGGACTAAAGGG 59.431 50.000 6.32 0.00 0.00 3.95
2705 3621 3.593096 GTGTAAGAACCGGGACTAAAGG 58.407 50.000 6.32 0.00 0.00 3.11
2706 3622 3.057315 TCGTGTAAGAACCGGGACTAAAG 60.057 47.826 6.32 0.00 0.00 1.85
2707 3623 2.890311 TCGTGTAAGAACCGGGACTAAA 59.110 45.455 6.32 0.00 0.00 1.85
2708 3624 2.513753 TCGTGTAAGAACCGGGACTAA 58.486 47.619 6.32 0.00 0.00 2.24
2709 3625 2.198827 TCGTGTAAGAACCGGGACTA 57.801 50.000 6.32 0.00 0.00 2.59
2710 3626 1.000171 GTTCGTGTAAGAACCGGGACT 60.000 52.381 6.32 0.73 43.33 3.85
2711 3627 1.422388 GTTCGTGTAAGAACCGGGAC 58.578 55.000 6.32 0.00 43.33 4.46
2712 3628 3.892200 GTTCGTGTAAGAACCGGGA 57.108 52.632 6.32 0.00 43.33 5.14
2718 3634 1.039068 TGTCCCGGTTCGTGTAAGAA 58.961 50.000 0.00 0.00 0.00 2.52
2719 3635 1.039068 TTGTCCCGGTTCGTGTAAGA 58.961 50.000 0.00 0.00 0.00 2.10
2720 3636 1.868469 TTTGTCCCGGTTCGTGTAAG 58.132 50.000 0.00 0.00 0.00 2.34
2721 3637 2.144730 CATTTGTCCCGGTTCGTGTAA 58.855 47.619 0.00 0.00 0.00 2.41
2722 3638 1.608542 CCATTTGTCCCGGTTCGTGTA 60.609 52.381 0.00 0.00 0.00 2.90
2723 3639 0.887387 CCATTTGTCCCGGTTCGTGT 60.887 55.000 0.00 0.00 0.00 4.49
2724 3640 1.582610 CCCATTTGTCCCGGTTCGTG 61.583 60.000 0.00 0.00 0.00 4.35
2725 3641 1.302993 CCCATTTGTCCCGGTTCGT 60.303 57.895 0.00 0.00 0.00 3.85
2726 3642 2.696759 GCCCATTTGTCCCGGTTCG 61.697 63.158 0.00 0.00 0.00 3.95
2727 3643 2.348104 GGCCCATTTGTCCCGGTTC 61.348 63.158 0.00 0.00 0.00 3.62
2728 3644 2.283604 GGCCCATTTGTCCCGGTT 60.284 61.111 0.00 0.00 0.00 4.44
2729 3645 3.264845 AGGCCCATTTGTCCCGGT 61.265 61.111 0.00 0.00 0.00 5.28
2730 3646 2.440247 GAGGCCCATTTGTCCCGG 60.440 66.667 0.00 0.00 0.00 5.73
2731 3647 2.440247 GGAGGCCCATTTGTCCCG 60.440 66.667 0.00 0.00 0.00 5.14
2732 3648 1.682344 GTGGAGGCCCATTTGTCCC 60.682 63.158 0.00 0.00 45.68 4.46
2733 3649 2.046285 CGTGGAGGCCCATTTGTCC 61.046 63.158 0.00 0.00 45.68 4.02
2734 3650 1.303317 ACGTGGAGGCCCATTTGTC 60.303 57.895 0.00 0.00 45.68 3.18
2735 3651 1.603455 CACGTGGAGGCCCATTTGT 60.603 57.895 7.95 0.00 45.68 2.83
2736 3652 2.342650 CCACGTGGAGGCCCATTTG 61.343 63.158 31.31 0.00 45.68 2.32
2737 3653 2.035626 CCACGTGGAGGCCCATTT 59.964 61.111 31.31 0.00 45.68 2.32
2738 3654 4.740822 GCCACGTGGAGGCCCATT 62.741 66.667 38.30 0.00 46.50 3.16
2773 3689 2.361737 GACCAAAGGCCCTCCTGC 60.362 66.667 0.00 0.00 43.40 4.85
2774 3690 2.356667 GGACCAAAGGCCCTCCTG 59.643 66.667 0.00 0.00 43.40 3.86
2776 3692 4.426313 CGGGACCAAAGGCCCTCC 62.426 72.222 0.00 0.00 37.05 4.30
2777 3693 4.426313 CCGGGACCAAAGGCCCTC 62.426 72.222 0.00 0.00 37.05 4.30
2779 3695 4.295199 AACCGGGACCAAAGGCCC 62.295 66.667 6.32 0.00 36.26 5.80
2780 3696 2.989253 CAACCGGGACCAAAGGCC 60.989 66.667 6.32 0.00 0.00 5.19
2781 3697 2.989253 CCAACCGGGACCAAAGGC 60.989 66.667 6.32 0.00 40.01 4.35
2782 3698 1.901464 CACCAACCGGGACCAAAGG 60.901 63.158 6.32 0.00 41.15 3.11
2783 3699 1.149627 TCACCAACCGGGACCAAAG 59.850 57.895 6.32 0.00 41.15 2.77
2784 3700 1.152922 GTCACCAACCGGGACCAAA 60.153 57.895 6.32 0.00 41.15 3.28
2785 3701 2.376165 TGTCACCAACCGGGACCAA 61.376 57.895 6.32 0.00 41.15 3.67
2786 3702 2.768769 TGTCACCAACCGGGACCA 60.769 61.111 6.32 0.00 41.15 4.02
2787 3703 2.281276 GTGTCACCAACCGGGACC 60.281 66.667 6.32 0.00 41.15 4.46
2788 3704 2.281276 GGTGTCACCAACCGGGAC 60.281 66.667 17.59 3.26 38.42 4.46
2797 3713 2.281276 GTCCCGGTTGGTGTCACC 60.281 66.667 15.64 15.64 39.22 4.02
2798 3714 2.281276 GGTCCCGGTTGGTGTCAC 60.281 66.667 0.00 0.00 34.77 3.67
2799 3715 1.923006 TTTGGTCCCGGTTGGTGTCA 61.923 55.000 0.00 0.00 34.77 3.58
2800 3716 0.752376 TTTTGGTCCCGGTTGGTGTC 60.752 55.000 0.00 0.00 34.77 3.67
2801 3717 0.753848 CTTTTGGTCCCGGTTGGTGT 60.754 55.000 0.00 0.00 34.77 4.16
2802 3718 1.460273 CCTTTTGGTCCCGGTTGGTG 61.460 60.000 0.00 0.00 34.77 4.17
2803 3719 1.152631 CCTTTTGGTCCCGGTTGGT 60.153 57.895 0.00 0.00 34.77 3.67
2804 3720 2.570284 GCCTTTTGGTCCCGGTTGG 61.570 63.158 0.00 0.00 42.99 3.77
2805 3721 1.184970 ATGCCTTTTGGTCCCGGTTG 61.185 55.000 0.00 0.00 42.99 3.77
2806 3722 0.898326 GATGCCTTTTGGTCCCGGTT 60.898 55.000 0.00 0.00 42.99 4.44
2807 3723 1.304134 GATGCCTTTTGGTCCCGGT 60.304 57.895 0.00 0.00 42.99 5.28
2808 3724 2.052104 GGATGCCTTTTGGTCCCGG 61.052 63.158 0.00 0.00 42.99 5.73
2809 3725 0.684153 ATGGATGCCTTTTGGTCCCG 60.684 55.000 0.00 0.00 42.99 5.14
2810 3726 0.826062 CATGGATGCCTTTTGGTCCC 59.174 55.000 0.00 0.00 42.99 4.46
2829 3745 0.815734 AGCCACTGAAATGCTGATGC 59.184 50.000 0.00 0.00 40.20 3.91
2834 3750 0.403271 ACCTCAGCCACTGAAATGCT 59.597 50.000 0.00 0.00 40.18 3.79
2835 3751 1.251251 AACCTCAGCCACTGAAATGC 58.749 50.000 0.00 0.00 40.18 3.56
2836 3752 4.053295 CAAAAACCTCAGCCACTGAAATG 58.947 43.478 0.00 0.00 40.18 2.32
2837 3753 3.706086 ACAAAAACCTCAGCCACTGAAAT 59.294 39.130 0.00 0.00 40.18 2.17
2838 3754 3.096092 ACAAAAACCTCAGCCACTGAAA 58.904 40.909 0.00 0.00 40.18 2.69
2839 3755 2.733956 ACAAAAACCTCAGCCACTGAA 58.266 42.857 0.00 0.00 40.18 3.02
2840 3756 2.435372 ACAAAAACCTCAGCCACTGA 57.565 45.000 0.00 0.00 38.25 3.41
2841 3757 3.525268 AAACAAAAACCTCAGCCACTG 57.475 42.857 0.00 0.00 0.00 3.66
2842 3758 4.551702 AAAAACAAAAACCTCAGCCACT 57.448 36.364 0.00 0.00 0.00 4.00
2871 3787 1.411741 TATCCCCTATACCCTCCCCC 58.588 60.000 0.00 0.00 0.00 5.40
2872 3788 3.816967 ATTATCCCCTATACCCTCCCC 57.183 52.381 0.00 0.00 0.00 4.81
2873 3789 5.670818 CCTAAATTATCCCCTATACCCTCCC 59.329 48.000 0.00 0.00 0.00 4.30
2874 3790 5.670818 CCCTAAATTATCCCCTATACCCTCC 59.329 48.000 0.00 0.00 0.00 4.30
2875 3791 6.158169 CACCCTAAATTATCCCCTATACCCTC 59.842 46.154 0.00 0.00 0.00 4.30
2876 3792 6.036631 CACCCTAAATTATCCCCTATACCCT 58.963 44.000 0.00 0.00 0.00 4.34
2877 3793 5.794289 ACACCCTAAATTATCCCCTATACCC 59.206 44.000 0.00 0.00 0.00 3.69
2878 3794 6.273965 ACACACCCTAAATTATCCCCTATACC 59.726 42.308 0.00 0.00 0.00 2.73
2879 3795 7.325725 ACACACCCTAAATTATCCCCTATAC 57.674 40.000 0.00 0.00 0.00 1.47
2880 3796 9.108111 CTTACACACCCTAAATTATCCCCTATA 57.892 37.037 0.00 0.00 0.00 1.31
2881 3797 7.475798 GCTTACACACCCTAAATTATCCCCTAT 60.476 40.741 0.00 0.00 0.00 2.57
2882 3798 6.183361 GCTTACACACCCTAAATTATCCCCTA 60.183 42.308 0.00 0.00 0.00 3.53
2883 3799 5.398695 GCTTACACACCCTAAATTATCCCCT 60.399 44.000 0.00 0.00 0.00 4.79
2884 3800 4.825634 GCTTACACACCCTAAATTATCCCC 59.174 45.833 0.00 0.00 0.00 4.81
2885 3801 5.691896 AGCTTACACACCCTAAATTATCCC 58.308 41.667 0.00 0.00 0.00 3.85
2886 3802 6.427242 GCTAGCTTACACACCCTAAATTATCC 59.573 42.308 7.70 0.00 0.00 2.59
2887 3803 7.217906 AGCTAGCTTACACACCCTAAATTATC 58.782 38.462 12.68 0.00 0.00 1.75
2888 3804 7.138054 AGCTAGCTTACACACCCTAAATTAT 57.862 36.000 12.68 0.00 0.00 1.28
2889 3805 6.555463 AGCTAGCTTACACACCCTAAATTA 57.445 37.500 12.68 0.00 0.00 1.40
2890 3806 5.437191 AGCTAGCTTACACACCCTAAATT 57.563 39.130 12.68 0.00 0.00 1.82
2891 3807 6.070424 TGTTAGCTAGCTTACACACCCTAAAT 60.070 38.462 27.88 0.07 31.75 1.40
2892 3808 5.246656 TGTTAGCTAGCTTACACACCCTAAA 59.753 40.000 27.88 8.11 31.75 1.85
2893 3809 4.773674 TGTTAGCTAGCTTACACACCCTAA 59.226 41.667 27.88 8.60 31.75 2.69
2894 3810 4.346730 TGTTAGCTAGCTTACACACCCTA 58.653 43.478 27.88 7.91 31.75 3.53
2895 3811 3.170717 TGTTAGCTAGCTTACACACCCT 58.829 45.455 27.88 1.88 31.75 4.34
2896 3812 3.194968 TCTGTTAGCTAGCTTACACACCC 59.805 47.826 27.88 6.20 33.00 4.61
2897 3813 4.158025 TCTCTGTTAGCTAGCTTACACACC 59.842 45.833 27.88 6.88 33.00 4.16
2898 3814 5.312120 TCTCTGTTAGCTAGCTTACACAC 57.688 43.478 27.88 15.38 33.00 3.82
2899 3815 7.640597 TTATCTCTGTTAGCTAGCTTACACA 57.359 36.000 27.88 22.50 33.00 3.72


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.