Multiple sequence alignment - TraesCS3B01G611700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G611700 chr3B 100.000 5156 0 0 1 5156 829282466 829287621 0.000000e+00 9522.0
1 TraesCS3B01G611700 chr3A 95.260 1772 64 6 2496 4254 746355806 746354042 0.000000e+00 2789.0
2 TraesCS3B01G611700 chr3A 86.858 974 73 23 1560 2494 746356887 746355930 0.000000e+00 1038.0
3 TraesCS3B01G611700 chr3A 95.645 597 25 1 4255 4851 746353981 746353386 0.000000e+00 957.0
4 TraesCS3B01G611700 chr3A 83.585 926 67 37 595 1470 746357808 746356918 0.000000e+00 789.0
5 TraesCS3B01G611700 chr3A 87.000 300 39 0 303 602 746358130 746357831 6.390000e-89 339.0
6 TraesCS3B01G611700 chr3A 90.500 200 19 0 1 200 746360598 746360399 1.100000e-66 265.0
7 TraesCS3B01G611700 chr3A 89.535 86 6 1 202 287 746358521 746358439 7.060000e-19 106.0
8 TraesCS3B01G611700 chr3D 95.847 1517 41 5 2756 4252 611564488 611566002 0.000000e+00 2433.0
9 TraesCS3B01G611700 chr3D 94.983 598 28 2 4255 4851 611566065 611566661 0.000000e+00 937.0
10 TraesCS3B01G611700 chr3D 85.419 775 68 21 685 1453 611562699 611563434 0.000000e+00 763.0
11 TraesCS3B01G611700 chr3D 91.618 513 43 0 1 513 611562008 611562520 0.000000e+00 710.0
12 TraesCS3B01G611700 chr3D 87.371 388 40 6 2374 2756 611564069 611564452 2.200000e-118 436.0
13 TraesCS3B01G611700 chr3D 90.323 155 14 1 1451 1605 280386973 280387126 8.750000e-48 202.0
14 TraesCS3B01G611700 chr3D 90.323 155 14 1 1451 1605 365000958 365000805 8.750000e-48 202.0
15 TraesCS3B01G611700 chr3D 88.000 150 18 0 1577 1726 611563433 611563582 1.480000e-40 178.0
16 TraesCS3B01G611700 chr4A 90.203 1480 126 8 2770 4239 13758631 13757161 0.000000e+00 1912.0
17 TraesCS3B01G611700 chr4A 75.505 396 49 22 1959 2330 13759523 13759152 3.220000e-32 150.0
18 TraesCS3B01G611700 chr4A 86.022 93 12 1 4384 4476 13756769 13756678 1.180000e-16 99.0
19 TraesCS3B01G611700 chr4D 90.999 1411 114 4 2770 4170 453319788 453321195 0.000000e+00 1890.0
20 TraesCS3B01G611700 chr4D 95.652 138 6 0 1451 1588 15801150 15801013 6.720000e-54 222.0
21 TraesCS3B01G611700 chr4B 90.125 1438 128 10 2819 4253 566979203 566980629 0.000000e+00 1857.0
22 TraesCS3B01G611700 chr4B 90.246 1343 119 9 2912 4253 566981810 566983141 0.000000e+00 1744.0
23 TraesCS3B01G611700 chr4B 88.889 90 9 1 4384 4473 566980859 566980947 5.460000e-20 110.0
24 TraesCS3B01G611700 chr4B 88.889 90 9 1 4384 4473 566983371 566983459 5.460000e-20 110.0
25 TraesCS3B01G611700 chr4B 89.091 55 6 0 1672 1726 566977824 566977878 9.260000e-08 69.4
26 TraesCS3B01G611700 chr5A 96.212 132 5 0 1451 1582 131187622 131187491 3.130000e-52 217.0
27 TraesCS3B01G611700 chr1A 81.923 260 40 4 202 456 153291865 153291608 4.040000e-51 213.0
28 TraesCS3B01G611700 chr1D 93.662 142 8 1 1447 1588 255827752 255827892 1.450000e-50 211.0
29 TraesCS3B01G611700 chr7D 93.571 140 9 0 1439 1578 161488719 161488858 5.230000e-50 209.0
30 TraesCS3B01G611700 chr7B 93.571 140 8 1 1451 1590 685050172 685050034 1.880000e-49 207.0
31 TraesCS3B01G611700 chr6A 92.908 141 9 1 1452 1592 32749188 32749049 2.430000e-48 204.0
32 TraesCS3B01G611700 chr5D 89.937 159 14 2 1431 1587 290643663 290643821 2.430000e-48 204.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G611700 chr3B 829282466 829287621 5155 False 9522.000000 9522 100.000000 1 5156 1 chr3B.!!$F1 5155
1 TraesCS3B01G611700 chr3A 746353386 746360598 7212 True 897.571429 2789 89.769000 1 4851 7 chr3A.!!$R1 4850
2 TraesCS3B01G611700 chr3D 611562008 611566661 4653 False 909.500000 2433 90.539667 1 4851 6 chr3D.!!$F2 4850
3 TraesCS3B01G611700 chr4A 13756678 13759523 2845 True 720.333333 1912 83.910000 1959 4476 3 chr4A.!!$R1 2517
4 TraesCS3B01G611700 chr4D 453319788 453321195 1407 False 1890.000000 1890 90.999000 2770 4170 1 chr4D.!!$F1 1400
5 TraesCS3B01G611700 chr4B 566977824 566983459 5635 False 778.080000 1857 89.448000 1672 4473 5 chr4B.!!$F1 2801

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
397 2568 0.032267 TGCGTTGTACACATGGTCGA 59.968 50.0 0.00 0.00 0.00 4.20 F
1058 3312 0.040603 CCGTACGGCCGTTCTATCTC 60.041 60.0 38.94 16.12 0.00 2.75 F
1331 3590 0.179034 CTAAGGAGCTCACCATGGCC 60.179 60.0 17.19 3.33 0.00 5.36 F
2370 4775 0.462225 CTGCATGGTCCTCTGCTCTG 60.462 60.0 15.28 5.30 39.16 3.35 F
2600 5163 0.969149 TCTCATGCGGAGTTCAGTGT 59.031 50.0 5.26 0.00 44.40 3.55 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1733 3996 0.033796 ATGTCTCCACATGCCCCAAG 60.034 55.000 0.00 0.00 42.05 3.61 R
2891 5778 0.034059 AGACTCTCCCTGCAAACACG 59.966 55.000 0.00 0.00 0.00 4.49 R
3264 6151 1.135721 GGATCAAAGGCATGCCAAGAC 59.864 52.381 37.18 21.42 38.92 3.01 R
4018 6905 0.813610 CACACACGGGCACTCTCAAA 60.814 55.000 0.00 0.00 0.00 2.69 R
4434 7574 1.826720 ACACATCCATGGACATTTGGC 59.173 47.619 18.99 0.00 32.80 4.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
41 42 7.178712 ACAAAACGAAGACAATCAAGTAGAG 57.821 36.000 0.00 0.00 0.00 2.43
60 61 5.489792 AGAGCACTTTTTCATCTGAGGTA 57.510 39.130 0.00 0.00 0.00 3.08
157 158 4.314522 TGGAGGTAAGCAAATGAATGGA 57.685 40.909 0.00 0.00 0.00 3.41
191 192 1.884579 CACCCCATTCAGCTATGCATC 59.115 52.381 0.19 0.00 0.00 3.91
272 2149 8.806146 TGATGATGATAATCTCGATTACAAGGA 58.194 33.333 1.73 0.00 36.24 3.36
282 2159 8.682936 ATCTCGATTACAAGGATGCTATTTTT 57.317 30.769 0.00 0.00 0.00 1.94
290 2461 7.158099 ACAAGGATGCTATTTTTCTACCAAC 57.842 36.000 0.00 0.00 0.00 3.77
292 2463 5.497474 AGGATGCTATTTTTCTACCAACGT 58.503 37.500 0.00 0.00 0.00 3.99
293 2464 5.944007 AGGATGCTATTTTTCTACCAACGTT 59.056 36.000 0.00 0.00 0.00 3.99
295 2466 7.039993 AGGATGCTATTTTTCTACCAACGTTTT 60.040 33.333 0.00 0.00 0.00 2.43
300 2471 8.021396 GCTATTTTTCTACCAACGTTTTGAGAT 58.979 33.333 0.00 0.00 34.24 2.75
360 2531 6.792977 ACTTTATATAATAGCCAGGTCCCTGT 59.207 38.462 12.20 0.00 42.15 4.00
377 2548 5.048294 GTCCCTGTGGTTTACAATAGGTTTG 60.048 44.000 0.14 0.00 39.20 2.93
384 2555 4.677832 GGTTTACAATAGGTTTGTGCGTTG 59.322 41.667 1.39 0.00 34.11 4.10
388 2559 3.878103 ACAATAGGTTTGTGCGTTGTACA 59.122 39.130 0.00 0.00 0.00 2.90
392 2563 2.032799 AGGTTTGTGCGTTGTACACATG 59.967 45.455 0.00 0.00 46.72 3.21
397 2568 0.032267 TGCGTTGTACACATGGTCGA 59.968 50.000 0.00 0.00 0.00 4.20
457 2628 3.544698 AGTTAGGTGGACTCCTTCTGA 57.455 47.619 0.00 0.00 38.86 3.27
466 2637 1.767681 GACTCCTTCTGATGCTGGGAT 59.232 52.381 0.00 0.00 0.00 3.85
469 2640 2.438763 CTCCTTCTGATGCTGGGATTCT 59.561 50.000 0.00 0.00 0.00 2.40
472 2643 1.883678 TCTGATGCTGGGATTCTGGA 58.116 50.000 0.00 0.00 0.00 3.86
498 2669 2.603776 GGTCCACTCTCCACCGGT 60.604 66.667 0.00 0.00 0.00 5.28
517 2688 2.108970 GTCGGGTCTTATCTTCCTGGT 58.891 52.381 0.00 0.00 0.00 4.00
533 2704 2.669240 GTCGGGTTCCTTCCAGGG 59.331 66.667 0.00 0.00 35.59 4.45
539 2710 1.214992 GGTTCCTTCCAGGGTCCCAT 61.215 60.000 11.55 0.00 35.59 4.00
540 2711 0.256177 GTTCCTTCCAGGGTCCCATC 59.744 60.000 11.55 0.00 35.59 3.51
627 2829 1.213678 GTAATTCCCCCTACACCCACC 59.786 57.143 0.00 0.00 0.00 4.61
631 2833 0.701659 TCCCCCTACACCCACCAAAA 60.702 55.000 0.00 0.00 0.00 2.44
632 2834 0.251608 CCCCCTACACCCACCAAAAG 60.252 60.000 0.00 0.00 0.00 2.27
707 2943 5.593909 CAGATTCCATATTTTAGTGGTGCCA 59.406 40.000 0.00 0.00 36.84 4.92
708 2944 5.594317 AGATTCCATATTTTAGTGGTGCCAC 59.406 40.000 13.13 13.13 46.50 5.01
778 3015 3.080121 CTTCCCCGCTGCTCTCCT 61.080 66.667 0.00 0.00 0.00 3.69
899 3149 1.425412 GGCGCTCGAGTTGTTTTCTA 58.575 50.000 15.13 0.00 0.00 2.10
1032 3282 2.202676 CTCGCCGAGCAAGAGGTC 60.203 66.667 0.00 0.00 38.87 3.85
1058 3312 0.040603 CCGTACGGCCGTTCTATCTC 60.041 60.000 38.94 16.12 0.00 2.75
1155 3413 4.142665 GGGCGTCTCTAGGTTTTCATTTTC 60.143 45.833 0.00 0.00 0.00 2.29
1249 3508 5.365605 ACACCATTATCCTCAGGTTCGATTA 59.634 40.000 0.00 0.00 30.44 1.75
1251 3510 4.923871 CCATTATCCTCAGGTTCGATTACG 59.076 45.833 0.00 0.00 41.26 3.18
1284 3543 1.033746 CAGCGGCCATGGTGAGAAAT 61.034 55.000 14.67 0.00 39.68 2.17
1285 3544 0.546122 AGCGGCCATGGTGAGAAATA 59.454 50.000 14.67 0.00 0.00 1.40
1286 3545 0.663153 GCGGCCATGGTGAGAAATAC 59.337 55.000 14.67 0.00 0.00 1.89
1287 3546 2.016604 GCGGCCATGGTGAGAAATACA 61.017 52.381 14.67 0.00 0.00 2.29
1288 3547 1.942657 CGGCCATGGTGAGAAATACAG 59.057 52.381 14.67 0.00 0.00 2.74
1289 3548 2.419990 CGGCCATGGTGAGAAATACAGA 60.420 50.000 14.67 0.00 0.00 3.41
1291 3550 3.370953 GGCCATGGTGAGAAATACAGAGT 60.371 47.826 14.67 0.00 0.00 3.24
1293 3552 4.446371 CCATGGTGAGAAATACAGAGTCC 58.554 47.826 2.57 0.00 0.00 3.85
1294 3553 4.080919 CCATGGTGAGAAATACAGAGTCCA 60.081 45.833 2.57 0.00 0.00 4.02
1295 3554 5.491070 CATGGTGAGAAATACAGAGTCCAA 58.509 41.667 0.00 0.00 0.00 3.53
1296 3555 5.762179 TGGTGAGAAATACAGAGTCCAAT 57.238 39.130 0.00 0.00 0.00 3.16
1297 3556 5.491070 TGGTGAGAAATACAGAGTCCAATG 58.509 41.667 0.00 0.00 0.00 2.82
1298 3557 5.013079 TGGTGAGAAATACAGAGTCCAATGT 59.987 40.000 0.00 0.00 0.00 2.71
1299 3558 5.582665 GGTGAGAAATACAGAGTCCAATGTC 59.417 44.000 0.00 0.00 0.00 3.06
1300 3559 5.582665 GTGAGAAATACAGAGTCCAATGTCC 59.417 44.000 0.00 0.00 0.00 4.02
1301 3560 5.485353 TGAGAAATACAGAGTCCAATGTCCT 59.515 40.000 0.00 0.00 0.00 3.85
1302 3561 6.667848 TGAGAAATACAGAGTCCAATGTCCTA 59.332 38.462 0.00 0.00 0.00 2.94
1303 3562 7.180229 TGAGAAATACAGAGTCCAATGTCCTAA 59.820 37.037 0.00 0.00 0.00 2.69
1304 3563 7.331791 AGAAATACAGAGTCCAATGTCCTAAC 58.668 38.462 0.00 0.00 0.00 2.34
1305 3564 3.983044 ACAGAGTCCAATGTCCTAACC 57.017 47.619 0.00 0.00 0.00 2.85
1306 3565 3.248024 ACAGAGTCCAATGTCCTAACCA 58.752 45.455 0.00 0.00 0.00 3.67
1307 3566 3.008049 ACAGAGTCCAATGTCCTAACCAC 59.992 47.826 0.00 0.00 0.00 4.16
1308 3567 3.261897 CAGAGTCCAATGTCCTAACCACT 59.738 47.826 0.00 0.00 0.00 4.00
1309 3568 4.466370 CAGAGTCCAATGTCCTAACCACTA 59.534 45.833 0.00 0.00 0.00 2.74
1310 3569 4.466726 AGAGTCCAATGTCCTAACCACTAC 59.533 45.833 0.00 0.00 0.00 2.73
1311 3570 4.164981 AGTCCAATGTCCTAACCACTACA 58.835 43.478 0.00 0.00 0.00 2.74
1312 3571 4.020485 AGTCCAATGTCCTAACCACTACAC 60.020 45.833 0.00 0.00 0.00 2.90
1313 3572 4.020485 GTCCAATGTCCTAACCACTACACT 60.020 45.833 0.00 0.00 0.00 3.55
1331 3590 0.179034 CTAAGGAGCTCACCATGGCC 60.179 60.000 17.19 3.33 0.00 5.36
1393 3652 6.808704 ACTACATGATTAGCATACACATAGCG 59.191 38.462 0.00 0.00 34.82 4.26
1397 3656 4.280929 TGATTAGCATACACATAGCGGTCT 59.719 41.667 0.00 0.00 0.00 3.85
1404 3663 5.508489 GCATACACATAGCGGTCTAACCTAA 60.508 44.000 0.00 0.00 35.66 2.69
1411 3670 6.208994 ACATAGCGGTCTAACCTAAGGATAAG 59.791 42.308 0.00 0.00 35.66 1.73
1415 3674 5.139001 CGGTCTAACCTAAGGATAAGGAGT 58.861 45.833 0.00 0.00 37.57 3.85
1431 3691 5.763876 AAGGAGTGTAGTAATTCAGGCTT 57.236 39.130 0.00 0.00 0.00 4.35
1434 3694 4.508662 GAGTGTAGTAATTCAGGCTTGCT 58.491 43.478 0.00 0.00 0.00 3.91
1453 3713 6.458888 GCTTGCTTGGTGGAATTCTTAGATAC 60.459 42.308 5.23 0.00 0.00 2.24
1465 3725 2.107901 TCTTAGATACTCCCTCCGTCCC 59.892 54.545 0.00 0.00 0.00 4.46
1470 3730 1.961133 TACTCCCTCCGTCCCAAAAT 58.039 50.000 0.00 0.00 0.00 1.82
1471 3731 1.073098 ACTCCCTCCGTCCCAAAATT 58.927 50.000 0.00 0.00 0.00 1.82
1474 3734 1.708551 TCCCTCCGTCCCAAAATTCTT 59.291 47.619 0.00 0.00 0.00 2.52
1476 3736 2.514803 CCTCCGTCCCAAAATTCTTGT 58.485 47.619 0.00 0.00 0.00 3.16
1477 3737 2.488153 CCTCCGTCCCAAAATTCTTGTC 59.512 50.000 0.00 0.00 0.00 3.18
1478 3738 3.412386 CTCCGTCCCAAAATTCTTGTCT 58.588 45.455 0.00 0.00 0.00 3.41
1479 3739 3.821033 CTCCGTCCCAAAATTCTTGTCTT 59.179 43.478 0.00 0.00 0.00 3.01
1481 3741 5.001232 TCCGTCCCAAAATTCTTGTCTTAG 58.999 41.667 0.00 0.00 0.00 2.18
1482 3742 5.001232 CCGTCCCAAAATTCTTGTCTTAGA 58.999 41.667 0.00 0.00 0.00 2.10
1483 3743 5.648092 CCGTCCCAAAATTCTTGTCTTAGAT 59.352 40.000 0.00 0.00 0.00 1.98
1484 3744 6.151144 CCGTCCCAAAATTCTTGTCTTAGATT 59.849 38.462 0.00 0.00 0.00 2.40
1486 3746 7.538678 CGTCCCAAAATTCTTGTCTTAGATTTG 59.461 37.037 0.00 0.00 29.84 2.32
1488 3748 8.576442 TCCCAAAATTCTTGTCTTAGATTTGTC 58.424 33.333 0.00 0.00 28.79 3.18
1489 3749 8.579863 CCCAAAATTCTTGTCTTAGATTTGTCT 58.420 33.333 0.00 0.00 28.79 3.41
1493 3753 9.566432 AAATTCTTGTCTTAGATTTGTCTGACT 57.434 29.630 9.51 0.00 0.00 3.41
1496 3756 9.645059 TTCTTGTCTTAGATTTGTCTGACTATG 57.355 33.333 9.51 0.00 0.00 2.23
1497 3757 8.253810 TCTTGTCTTAGATTTGTCTGACTATGG 58.746 37.037 9.51 0.00 0.00 2.74
1498 3758 7.718334 TGTCTTAGATTTGTCTGACTATGGA 57.282 36.000 9.51 0.00 0.00 3.41
1499 3759 8.311395 TGTCTTAGATTTGTCTGACTATGGAT 57.689 34.615 9.51 0.00 0.00 3.41
1500 3760 8.200120 TGTCTTAGATTTGTCTGACTATGGATG 58.800 37.037 9.51 0.00 0.00 3.51
1501 3761 8.200792 GTCTTAGATTTGTCTGACTATGGATGT 58.799 37.037 9.51 0.00 0.00 3.06
1502 3762 9.421399 TCTTAGATTTGTCTGACTATGGATGTA 57.579 33.333 9.51 0.00 0.00 2.29
1505 3765 8.255111 AGATTTGTCTGACTATGGATGTATCA 57.745 34.615 9.51 0.00 0.00 2.15
1506 3766 8.708378 AGATTTGTCTGACTATGGATGTATCAA 58.292 33.333 9.51 0.00 0.00 2.57
1507 3767 8.899427 ATTTGTCTGACTATGGATGTATCAAG 57.101 34.615 9.51 0.00 0.00 3.02
1508 3768 7.423844 TTGTCTGACTATGGATGTATCAAGT 57.576 36.000 9.51 0.00 0.00 3.16
1509 3769 7.043961 TGTCTGACTATGGATGTATCAAGTC 57.956 40.000 9.51 11.32 35.22 3.01
1510 3770 6.607198 TGTCTGACTATGGATGTATCAAGTCA 59.393 38.462 9.51 16.32 38.80 3.41
1511 3771 6.920758 GTCTGACTATGGATGTATCAAGTCAC 59.079 42.308 14.60 7.42 37.52 3.67
1512 3772 5.831997 TGACTATGGATGTATCAAGTCACG 58.168 41.667 14.60 0.00 37.52 4.35
1513 3773 5.359860 TGACTATGGATGTATCAAGTCACGT 59.640 40.000 14.60 0.00 37.52 4.49
1514 3774 6.127451 TGACTATGGATGTATCAAGTCACGTT 60.127 38.462 14.60 0.00 37.52 3.99
1515 3775 6.640518 ACTATGGATGTATCAAGTCACGTTT 58.359 36.000 0.00 0.00 0.00 3.60
1516 3776 7.103641 ACTATGGATGTATCAAGTCACGTTTT 58.896 34.615 0.00 0.00 0.00 2.43
1517 3777 8.255206 ACTATGGATGTATCAAGTCACGTTTTA 58.745 33.333 0.00 0.00 0.00 1.52
1518 3778 6.961359 TGGATGTATCAAGTCACGTTTTAG 57.039 37.500 0.00 0.00 0.00 1.85
1519 3779 6.460781 TGGATGTATCAAGTCACGTTTTAGT 58.539 36.000 0.00 0.00 0.00 2.24
1520 3780 7.604549 TGGATGTATCAAGTCACGTTTTAGTA 58.395 34.615 0.00 0.00 0.00 1.82
1521 3781 8.255206 TGGATGTATCAAGTCACGTTTTAGTAT 58.745 33.333 0.00 0.00 0.00 2.12
1522 3782 9.095065 GGATGTATCAAGTCACGTTTTAGTATT 57.905 33.333 0.00 0.00 0.00 1.89
1532 3792 9.962783 AGTCACGTTTTAGTATTAGATACATCC 57.037 33.333 0.00 0.00 38.21 3.51
1533 3793 8.899776 GTCACGTTTTAGTATTAGATACATCCG 58.100 37.037 0.00 0.00 38.21 4.18
1534 3794 8.623903 TCACGTTTTAGTATTAGATACATCCGT 58.376 33.333 0.00 0.00 38.21 4.69
1535 3795 9.882996 CACGTTTTAGTATTAGATACATCCGTA 57.117 33.333 0.00 0.00 38.21 4.02
1551 3811 7.131498 ACATCCGTATCTAGACGAATCTAAC 57.869 40.000 5.60 0.00 45.82 2.34
1552 3812 6.709397 ACATCCGTATCTAGACGAATCTAACA 59.291 38.462 5.60 0.00 45.82 2.41
1553 3813 6.536731 TCCGTATCTAGACGAATCTAACAC 57.463 41.667 5.60 0.00 45.82 3.32
1557 3817 7.254692 CCGTATCTAGACGAATCTAACACAAGA 60.255 40.741 5.60 0.00 45.82 3.02
1558 3818 8.121086 CGTATCTAGACGAATCTAACACAAGAA 58.879 37.037 0.00 0.00 45.82 2.52
1563 3823 9.746711 CTAGACGAATCTAACACAAGAATTTTG 57.253 33.333 0.00 0.00 36.98 2.44
1573 3833 1.818674 CAAGAATTTTGGGACGGAGGG 59.181 52.381 0.00 0.00 0.00 4.30
1588 3851 6.013984 GGGACGGAGGGAGTATTTTATAATGA 60.014 42.308 0.00 0.00 0.00 2.57
1612 3875 3.119849 AGTCGTGCTGAATTGTTTATGCC 60.120 43.478 0.00 0.00 0.00 4.40
1718 3981 6.824305 AGTGTTGTTTTGATCTAAGGGATG 57.176 37.500 0.00 0.00 34.33 3.51
1730 3993 4.922206 TCTAAGGGATGTTGTGCAGAATT 58.078 39.130 0.00 0.00 0.00 2.17
1733 3996 4.525912 AGGGATGTTGTGCAGAATTTTC 57.474 40.909 0.00 0.00 0.00 2.29
1735 3998 4.590222 AGGGATGTTGTGCAGAATTTTCTT 59.410 37.500 0.00 0.00 34.74 2.52
1745 4009 3.592059 CAGAATTTTCTTGGGGCATGTG 58.408 45.455 0.00 0.00 34.74 3.21
1766 4030 3.260884 TGGAGACATGACTTACTGGAACC 59.739 47.826 0.00 0.00 33.40 3.62
1775 4039 3.311091 ACTTACTGGAACCCACACACTA 58.689 45.455 0.00 0.00 0.00 2.74
1776 4040 3.712733 ACTTACTGGAACCCACACACTAA 59.287 43.478 0.00 0.00 0.00 2.24
1777 4041 4.349930 ACTTACTGGAACCCACACACTAAT 59.650 41.667 0.00 0.00 0.00 1.73
1778 4042 3.876309 ACTGGAACCCACACACTAATT 57.124 42.857 0.00 0.00 0.00 1.40
1779 4043 4.178956 ACTGGAACCCACACACTAATTT 57.821 40.909 0.00 0.00 0.00 1.82
1780 4044 3.888930 ACTGGAACCCACACACTAATTTG 59.111 43.478 0.00 0.00 0.00 2.32
1781 4045 3.888930 CTGGAACCCACACACTAATTTGT 59.111 43.478 0.00 0.00 0.00 2.83
1782 4046 4.282496 TGGAACCCACACACTAATTTGTT 58.718 39.130 0.00 0.00 0.00 2.83
1783 4047 4.098654 TGGAACCCACACACTAATTTGTTG 59.901 41.667 0.00 0.00 0.00 3.33
1784 4048 4.098807 GGAACCCACACACTAATTTGTTGT 59.901 41.667 0.00 0.00 0.00 3.32
1785 4049 4.911514 ACCCACACACTAATTTGTTGTC 57.088 40.909 0.00 0.00 0.00 3.18
1824 4088 9.613428 ATTATGTGTTTTGCTAGAGCTTGTATA 57.387 29.630 2.72 0.00 42.66 1.47
1848 4112 0.804364 GATGATGCCGTGTTCTGCAA 59.196 50.000 0.00 0.00 41.50 4.08
1849 4113 1.199789 GATGATGCCGTGTTCTGCAAA 59.800 47.619 0.00 0.00 41.50 3.68
1859 4123 4.984161 CCGTGTTCTGCAAATGATTTTCTT 59.016 37.500 0.00 0.00 0.00 2.52
1889 4157 2.806945 TCCCACCCAACATCAGAATC 57.193 50.000 0.00 0.00 0.00 2.52
1919 4197 8.499162 CAAGTGTACTTCTTTGGTTAGAATCAG 58.501 37.037 0.00 0.00 33.89 2.90
1958 4236 8.876275 TTTAATACGAGTGTTTGTCAGTTAGT 57.124 30.769 0.00 0.00 0.00 2.24
1987 4315 7.604545 AGCTTAGTGTTTCTTTTAGCTTAGAGG 59.395 37.037 0.00 0.00 33.58 3.69
2058 4393 9.725019 AGAATTCCGTATGCATATTGAATTAGA 57.275 29.630 28.25 10.59 33.81 2.10
2095 4432 3.068873 TCGGTGCTTAATGCTTTTGGTTT 59.931 39.130 0.00 0.00 43.37 3.27
2110 4448 9.995003 TGCTTTTGGTTTAAACATATGATCTTT 57.005 25.926 19.57 2.37 0.00 2.52
2185 4525 7.276438 GGCTGAGGTCAAAATTATGTTCATTTC 59.724 37.037 0.00 0.00 0.00 2.17
2238 4600 2.687935 GCTGTTTTTGGAGTTCAGGTGA 59.312 45.455 0.00 0.00 0.00 4.02
2254 4616 4.236527 AGGTGACTGGTCCAATATTTCC 57.763 45.455 0.00 0.00 41.13 3.13
2255 4617 3.591527 AGGTGACTGGTCCAATATTTCCA 59.408 43.478 0.00 0.00 41.13 3.53
2340 4702 6.805713 ACTTCTTTGGTTAGAAACACCATTG 58.194 36.000 0.00 0.00 44.05 2.82
2361 4766 2.077687 ATGGAATTCCTGCATGGTCC 57.922 50.000 24.73 0.00 34.26 4.46
2367 4772 1.203441 TTCCTGCATGGTCCTCTGCT 61.203 55.000 15.28 0.00 39.16 4.24
2368 4773 1.153208 CCTGCATGGTCCTCTGCTC 60.153 63.158 15.28 0.00 39.16 4.26
2369 4774 1.624479 CCTGCATGGTCCTCTGCTCT 61.624 60.000 15.28 0.00 39.16 4.09
2370 4775 0.462225 CTGCATGGTCCTCTGCTCTG 60.462 60.000 15.28 5.30 39.16 3.35
2371 4776 1.196766 TGCATGGTCCTCTGCTCTGT 61.197 55.000 15.28 0.00 39.16 3.41
2400 4805 7.782049 TGGAATAGTTATATAGCGAGGATTGG 58.218 38.462 0.00 0.00 0.00 3.16
2414 4819 4.615223 CGAGGATTGGCTGATGCATTTATG 60.615 45.833 0.00 0.00 41.91 1.90
2479 4885 9.227777 GTTAGGAATTAGTATCACAACCAAAGT 57.772 33.333 0.00 0.00 0.00 2.66
2480 4886 7.687941 AGGAATTAGTATCACAACCAAAGTG 57.312 36.000 0.00 0.00 38.32 3.16
2494 5022 3.194755 ACCAAAGTGAAAACCAACCTGTC 59.805 43.478 0.00 0.00 0.00 3.51
2503 5031 7.039270 GTGAAAACCAACCTGTCATAACTTTT 58.961 34.615 0.00 0.00 0.00 2.27
2598 5161 2.839486 TTTCTCATGCGGAGTTCAGT 57.161 45.000 5.26 0.00 44.40 3.41
2599 5162 2.084610 TTCTCATGCGGAGTTCAGTG 57.915 50.000 5.26 0.00 44.40 3.66
2600 5163 0.969149 TCTCATGCGGAGTTCAGTGT 59.031 50.000 5.26 0.00 44.40 3.55
2626 5189 5.875359 GGAACAAGAATAGTACTGGGTTCTG 59.125 44.000 16.05 13.24 35.17 3.02
2698 5269 8.840833 TCACATATTTTAAGTCAGCACAGTTA 57.159 30.769 0.00 0.00 0.00 2.24
2702 5273 9.760660 CATATTTTAAGTCAGCACAGTTAACTC 57.239 33.333 4.77 0.00 0.00 3.01
2891 5778 7.516198 AAGGCATCTTATATGATTGGTCAAC 57.484 36.000 0.00 0.00 38.01 3.18
3006 5893 1.271379 CTGTGCATGCAACCTGATGTT 59.729 47.619 24.58 0.00 37.80 2.71
3056 5943 1.302511 GCAAGGAGAGGTGCCGAAA 60.303 57.895 0.00 0.00 34.58 3.46
3264 6151 3.533606 AGGGATCGTGATCAGAAACTG 57.466 47.619 11.66 0.00 39.54 3.16
3287 6174 1.324740 TGGCATGCCTTTGATCCAGC 61.325 55.000 35.53 6.75 36.94 4.85
3354 6241 3.223589 GCCGTGGGCTTTGGTTGT 61.224 61.111 0.00 0.00 46.69 3.32
3540 6427 3.690685 CTATGTTGCCGGCGGGGAA 62.691 63.158 29.48 13.37 41.91 3.97
3675 6562 5.535783 TGTATATGATGGCAAATGGTTCCTG 59.464 40.000 0.00 0.00 0.00 3.86
3885 6772 2.421424 GTGGACAAGATTCATGGACAGC 59.579 50.000 0.00 0.00 0.00 4.40
3890 6777 3.244665 ACAAGATTCATGGACAGCAGACA 60.245 43.478 0.00 0.00 0.00 3.41
3954 6841 4.332268 GTCTCACTGAATGGAAAGATCTGC 59.668 45.833 0.00 0.00 0.00 4.26
4005 6892 1.531149 GTTGATGTCTGTGACCCAACG 59.469 52.381 13.12 0.00 36.36 4.10
4018 6905 3.070446 TGACCCAACGACAGTTATTGAGT 59.930 43.478 0.00 0.00 38.79 3.41
4194 7081 9.691362 GTTTAGTGGAAACATGTTCAAATGTAT 57.309 29.630 12.39 0.00 45.82 2.29
4285 7376 5.076182 TGGTTGCATTCCTACAAATTCTCA 58.924 37.500 9.35 0.00 0.00 3.27
4286 7377 5.538053 TGGTTGCATTCCTACAAATTCTCAA 59.462 36.000 9.35 0.00 0.00 3.02
4322 7413 6.311935 CCAAGTTGCATGATGTTTATGAAAGG 59.688 38.462 0.00 0.00 0.00 3.11
4329 7420 5.779241 TGATGTTTATGAAAGGGGAGACT 57.221 39.130 0.00 0.00 0.00 3.24
4430 7570 1.831580 AGGCAGCAGAAGATTTCACC 58.168 50.000 0.00 0.00 0.00 4.02
4434 7574 2.419324 GCAGCAGAAGATTTCACCTGAG 59.581 50.000 10.76 0.00 34.18 3.35
4437 7577 2.877300 GCAGAAGATTTCACCTGAGCCA 60.877 50.000 0.00 0.00 0.00 4.75
4438 7578 3.415212 CAGAAGATTTCACCTGAGCCAA 58.585 45.455 0.00 0.00 0.00 4.52
4490 7630 3.249986 GCAGATTAGGCATGCCAAAAA 57.750 42.857 37.18 26.65 38.92 1.94
4630 7801 5.366477 TGCACACCCTAGATCAATCTTATGA 59.634 40.000 0.00 0.00 38.32 2.15
4752 7934 0.461516 TCTCGTAGTGATCCGCTCGT 60.462 55.000 0.00 0.00 0.00 4.18
4764 7951 1.933181 TCCGCTCGTTGATGCTAATTG 59.067 47.619 0.00 0.00 0.00 2.32
4857 8044 8.187913 TGAAATAATTCACCAAATTCACAGGA 57.812 30.769 0.00 0.00 40.59 3.86
4860 8047 7.959658 ATAATTCACCAAATTCACAGGATGA 57.040 32.000 0.00 0.00 37.21 2.92
4875 8062 8.672823 TCACAGGATGAAAGAGATGAAATATG 57.327 34.615 0.00 0.00 39.69 1.78
4876 8063 8.270030 TCACAGGATGAAAGAGATGAAATATGT 58.730 33.333 0.00 0.00 39.69 2.29
4878 8065 7.501559 ACAGGATGAAAGAGATGAAATATGTGG 59.498 37.037 0.00 0.00 39.69 4.17
4880 8067 7.501559 AGGATGAAAGAGATGAAATATGTGGTG 59.498 37.037 0.00 0.00 0.00 4.17
4881 8068 7.500227 GGATGAAAGAGATGAAATATGTGGTGA 59.500 37.037 0.00 0.00 0.00 4.02
4882 8069 8.991783 ATGAAAGAGATGAAATATGTGGTGAT 57.008 30.769 0.00 0.00 0.00 3.06
4884 8071 6.630444 AAGAGATGAAATATGTGGTGATGC 57.370 37.500 0.00 0.00 0.00 3.91
4885 8072 5.938279 AGAGATGAAATATGTGGTGATGCT 58.062 37.500 0.00 0.00 0.00 3.79
4887 8074 7.512130 AGAGATGAAATATGTGGTGATGCTTA 58.488 34.615 0.00 0.00 0.00 3.09
4888 8075 8.162085 AGAGATGAAATATGTGGTGATGCTTAT 58.838 33.333 0.00 0.00 0.00 1.73
4890 8077 6.544038 TGAAATATGTGGTGATGCTTATCG 57.456 37.500 0.00 0.00 0.00 2.92
4891 8078 5.469760 TGAAATATGTGGTGATGCTTATCGG 59.530 40.000 0.00 0.00 0.00 4.18
4892 8079 4.623932 ATATGTGGTGATGCTTATCGGT 57.376 40.909 0.00 0.00 0.00 4.69
4893 8080 2.779755 TGTGGTGATGCTTATCGGTT 57.220 45.000 0.00 0.00 0.00 4.44
4895 8082 2.290008 TGTGGTGATGCTTATCGGTTGT 60.290 45.455 0.00 0.00 0.00 3.32
4896 8083 2.747446 GTGGTGATGCTTATCGGTTGTT 59.253 45.455 0.00 0.00 0.00 2.83
4897 8084 3.190535 GTGGTGATGCTTATCGGTTGTTT 59.809 43.478 0.00 0.00 0.00 2.83
4899 8086 3.438781 GGTGATGCTTATCGGTTGTTTGA 59.561 43.478 0.00 0.00 0.00 2.69
4900 8087 4.403453 GTGATGCTTATCGGTTGTTTGAC 58.597 43.478 0.00 0.00 0.00 3.18
4901 8088 4.068599 TGATGCTTATCGGTTGTTTGACA 58.931 39.130 0.00 0.00 0.00 3.58
4902 8089 4.154015 TGATGCTTATCGGTTGTTTGACAG 59.846 41.667 0.00 0.00 0.00 3.51
4903 8090 3.472652 TGCTTATCGGTTGTTTGACAGT 58.527 40.909 0.00 0.00 0.00 3.55
4906 8093 2.519377 ATCGGTTGTTTGACAGTCGA 57.481 45.000 0.00 9.12 38.17 4.20
4908 8095 2.400399 TCGGTTGTTTGACAGTCGATC 58.600 47.619 0.00 0.00 32.53 3.69
4909 8096 1.124297 CGGTTGTTTGACAGTCGATCG 59.876 52.381 9.36 9.36 30.76 3.69
4910 8097 2.400399 GGTTGTTTGACAGTCGATCGA 58.600 47.619 15.15 15.15 0.00 3.59
4912 8099 3.060895 GGTTGTTTGACAGTCGATCGATC 59.939 47.826 22.50 15.68 0.00 3.69
4913 8100 3.569250 TGTTTGACAGTCGATCGATCA 57.431 42.857 22.50 17.84 0.00 2.92
4915 8102 4.105486 TGTTTGACAGTCGATCGATCATC 58.895 43.478 22.50 17.84 0.00 2.92
4916 8103 4.105486 GTTTGACAGTCGATCGATCATCA 58.895 43.478 22.50 20.07 0.00 3.07
4918 8105 2.682856 TGACAGTCGATCGATCATCACA 59.317 45.455 22.50 13.56 0.00 3.58
4919 8106 3.242870 TGACAGTCGATCGATCATCACAG 60.243 47.826 22.50 15.59 0.00 3.66
4920 8107 2.945668 ACAGTCGATCGATCATCACAGA 59.054 45.455 22.50 9.94 0.00 3.41
4921 8108 3.378427 ACAGTCGATCGATCATCACAGAA 59.622 43.478 22.50 0.00 0.00 3.02
4922 8109 3.973767 CAGTCGATCGATCATCACAGAAG 59.026 47.826 22.50 5.61 0.00 2.85
4924 8111 4.518590 AGTCGATCGATCATCACAGAAGAT 59.481 41.667 22.50 1.02 0.00 2.40
4925 8112 4.616381 GTCGATCGATCATCACAGAAGATG 59.384 45.833 22.50 4.21 45.28 2.90
4937 8124 7.856556 CATCACAGAAGATGAAAGAGATGATG 58.143 38.462 0.00 0.00 46.51 3.07
4938 8125 7.179076 TCACAGAAGATGAAAGAGATGATGA 57.821 36.000 0.00 0.00 0.00 2.92
4939 8126 7.793036 TCACAGAAGATGAAAGAGATGATGAT 58.207 34.615 0.00 0.00 0.00 2.45
4940 8127 7.711339 TCACAGAAGATGAAAGAGATGATGATG 59.289 37.037 0.00 0.00 0.00 3.07
4941 8128 7.711339 CACAGAAGATGAAAGAGATGATGATGA 59.289 37.037 0.00 0.00 0.00 2.92
4942 8129 8.265764 ACAGAAGATGAAAGAGATGATGATGAA 58.734 33.333 0.00 0.00 0.00 2.57
4943 8130 8.769891 CAGAAGATGAAAGAGATGATGATGAAG 58.230 37.037 0.00 0.00 0.00 3.02
4944 8131 8.706521 AGAAGATGAAAGAGATGATGATGAAGA 58.293 33.333 0.00 0.00 0.00 2.87
4945 8132 9.496873 GAAGATGAAAGAGATGATGATGAAGAT 57.503 33.333 0.00 0.00 0.00 2.40
4948 8135 8.780846 ATGAAAGAGATGATGATGAAGATAGC 57.219 34.615 0.00 0.00 0.00 2.97
4949 8136 6.867293 TGAAAGAGATGATGATGAAGATAGCG 59.133 38.462 0.00 0.00 0.00 4.26
4950 8137 6.587206 AAGAGATGATGATGAAGATAGCGA 57.413 37.500 0.00 0.00 0.00 4.93
4951 8138 5.953183 AGAGATGATGATGAAGATAGCGAC 58.047 41.667 0.00 0.00 0.00 5.19
4952 8139 4.731720 AGATGATGATGAAGATAGCGACG 58.268 43.478 0.00 0.00 0.00 5.12
4953 8140 4.457257 AGATGATGATGAAGATAGCGACGA 59.543 41.667 0.00 0.00 0.00 4.20
4954 8141 4.773323 TGATGATGAAGATAGCGACGAT 57.227 40.909 0.00 0.00 0.00 3.73
4967 8154 0.101219 CGACGATGATGAGCCACTGA 59.899 55.000 0.00 0.00 0.00 3.41
4968 8155 1.269465 CGACGATGATGAGCCACTGAT 60.269 52.381 0.00 0.00 0.00 2.90
4969 8156 2.030805 CGACGATGATGAGCCACTGATA 60.031 50.000 0.00 0.00 0.00 2.15
4970 8157 3.573598 GACGATGATGAGCCACTGATAG 58.426 50.000 0.00 0.00 0.00 2.08
4971 8158 2.288702 ACGATGATGAGCCACTGATAGC 60.289 50.000 0.00 0.00 0.00 2.97
4975 8162 4.160642 TGATGAGCCACTGATAGCATTT 57.839 40.909 0.00 0.00 0.00 2.32
4978 8165 4.226427 TGAGCCACTGATAGCATTTTCT 57.774 40.909 0.00 0.00 0.00 2.52
4979 8166 5.357742 TGAGCCACTGATAGCATTTTCTA 57.642 39.130 0.00 0.00 0.00 2.10
4981 8168 5.761726 TGAGCCACTGATAGCATTTTCTATG 59.238 40.000 0.00 0.00 29.93 2.23
4982 8169 5.688807 AGCCACTGATAGCATTTTCTATGT 58.311 37.500 0.00 0.00 29.93 2.29
4983 8170 6.125029 AGCCACTGATAGCATTTTCTATGTT 58.875 36.000 0.00 0.00 29.93 2.71
4984 8171 6.039047 AGCCACTGATAGCATTTTCTATGTTG 59.961 38.462 0.00 0.00 29.93 3.33
4985 8172 6.038603 GCCACTGATAGCATTTTCTATGTTGA 59.961 38.462 0.00 0.00 29.93 3.18
4986 8173 7.255381 GCCACTGATAGCATTTTCTATGTTGAT 60.255 37.037 0.00 0.00 29.93 2.57
4994 8181 8.854614 AGCATTTTCTATGTTGATAGATACCC 57.145 34.615 0.00 0.00 40.27 3.69
4995 8182 8.439971 AGCATTTTCTATGTTGATAGATACCCA 58.560 33.333 0.00 0.00 40.27 4.51
4998 8185 6.935240 TTCTATGTTGATAGATACCCAGGG 57.065 41.667 2.85 2.85 40.27 4.45
5002 8189 3.709653 TGTTGATAGATACCCAGGGACAC 59.290 47.826 14.54 2.25 0.00 3.67
5007 8882 2.402564 AGATACCCAGGGACACATCTG 58.597 52.381 14.54 0.00 0.00 2.90
5010 8885 1.377725 CCCAGGGACACATCTGCAC 60.378 63.158 0.00 0.00 0.00 4.57
5011 8886 1.377725 CCAGGGACACATCTGCACC 60.378 63.158 0.00 0.00 0.00 5.01
5012 8887 1.681666 CAGGGACACATCTGCACCT 59.318 57.895 0.00 0.00 0.00 4.00
5014 8889 1.130054 AGGGACACATCTGCACCTGT 61.130 55.000 0.00 0.00 0.00 4.00
5016 8891 0.957395 GGACACATCTGCACCTGTGG 60.957 60.000 21.69 9.11 45.53 4.17
5019 8894 0.250424 CACATCTGCACCTGTGGTCA 60.250 55.000 13.67 0.00 39.24 4.02
5020 8895 0.473755 ACATCTGCACCTGTGGTCAA 59.526 50.000 0.00 0.00 31.02 3.18
5023 8898 0.394192 TCTGCACCTGTGGTCAAGAG 59.606 55.000 0.00 0.00 31.02 2.85
5028 8903 0.683973 ACCTGTGGTCAAGAGCAGAG 59.316 55.000 16.65 16.65 45.99 3.35
5029 8904 0.673022 CCTGTGGTCAAGAGCAGAGC 60.673 60.000 17.79 1.99 45.35 4.09
5031 8906 0.034476 TGTGGTCAAGAGCAGAGCAG 59.966 55.000 1.67 0.00 43.32 4.24
5033 8908 0.607112 TGGTCAAGAGCAGAGCAGAG 59.393 55.000 0.00 0.00 38.45 3.35
5035 8910 0.037512 GTCAAGAGCAGAGCAGAGCA 60.038 55.000 0.00 0.00 0.00 4.26
5036 8911 0.246910 TCAAGAGCAGAGCAGAGCAG 59.753 55.000 0.00 0.00 0.00 4.24
5043 8918 1.993948 AGAGCAGAGCAGGGCATGA 60.994 57.895 1.99 0.00 0.00 3.07
5044 8919 1.077930 GAGCAGAGCAGGGCATGAA 60.078 57.895 1.99 0.00 0.00 2.57
5046 8921 0.752009 AGCAGAGCAGGGCATGAATG 60.752 55.000 1.99 0.00 0.00 2.67
5047 8922 1.735376 GCAGAGCAGGGCATGAATGG 61.735 60.000 1.99 0.00 0.00 3.16
5048 8923 0.106868 CAGAGCAGGGCATGAATGGA 60.107 55.000 1.99 0.00 0.00 3.41
5049 8924 0.851469 AGAGCAGGGCATGAATGGAT 59.149 50.000 1.99 0.00 0.00 3.41
5050 8925 1.202903 AGAGCAGGGCATGAATGGATC 60.203 52.381 1.99 0.00 0.00 3.36
5051 8926 0.554305 AGCAGGGCATGAATGGATCA 59.446 50.000 1.99 0.00 43.67 2.92
5052 8927 0.959553 GCAGGGCATGAATGGATCAG 59.040 55.000 1.99 0.00 42.53 2.90
5053 8928 1.478105 GCAGGGCATGAATGGATCAGA 60.478 52.381 1.99 0.00 42.53 3.27
5055 8930 2.105993 CAGGGCATGAATGGATCAGAGA 59.894 50.000 0.00 0.00 42.53 3.10
5056 8931 2.987437 AGGGCATGAATGGATCAGAGAT 59.013 45.455 0.00 0.00 42.53 2.75
5058 8933 3.009253 GGGCATGAATGGATCAGAGATCT 59.991 47.826 0.00 0.00 42.53 2.75
5059 8934 4.004314 GGCATGAATGGATCAGAGATCTG 58.996 47.826 0.00 3.33 42.53 2.90
5062 8937 4.765813 TGAATGGATCAGAGATCTGCAA 57.234 40.909 0.00 0.00 43.46 4.08
5063 8938 5.106876 TGAATGGATCAGAGATCTGCAAA 57.893 39.130 0.00 0.00 43.46 3.68
5064 8939 5.123936 TGAATGGATCAGAGATCTGCAAAG 58.876 41.667 0.00 0.00 43.46 2.77
5065 8940 5.104652 TGAATGGATCAGAGATCTGCAAAGA 60.105 40.000 0.00 0.00 43.46 2.52
5068 8943 4.163649 TGGATCAGAGATCTGCAAAGATGT 59.836 41.667 0.00 0.00 43.46 3.06
5070 8945 5.695816 GGATCAGAGATCTGCAAAGATGTAC 59.304 44.000 0.00 0.00 43.46 2.90
5072 8947 4.399303 TCAGAGATCTGCAAAGATGTACGA 59.601 41.667 0.00 0.00 43.46 3.43
5074 8949 4.400884 AGAGATCTGCAAAGATGTACGACT 59.599 41.667 0.00 0.00 0.00 4.18
5075 8950 5.078411 AGATCTGCAAAGATGTACGACTT 57.922 39.130 0.00 0.00 0.00 3.01
5076 8951 4.867047 AGATCTGCAAAGATGTACGACTTG 59.133 41.667 0.00 0.16 0.00 3.16
5077 8952 4.251543 TCTGCAAAGATGTACGACTTGA 57.748 40.909 5.38 0.00 0.00 3.02
5078 8953 4.820897 TCTGCAAAGATGTACGACTTGAT 58.179 39.130 5.38 0.00 0.00 2.57
5079 8954 4.627035 TCTGCAAAGATGTACGACTTGATG 59.373 41.667 5.38 3.31 0.00 3.07
5080 8955 3.684305 TGCAAAGATGTACGACTTGATGG 59.316 43.478 5.38 0.00 0.00 3.51
5082 8957 3.610040 AAGATGTACGACTTGATGGCA 57.390 42.857 0.00 0.00 0.00 4.92
5083 8958 3.827008 AGATGTACGACTTGATGGCAT 57.173 42.857 0.00 0.00 0.00 4.40
5085 8960 3.132824 AGATGTACGACTTGATGGCATGA 59.867 43.478 3.81 0.00 0.00 3.07
5086 8961 3.326836 TGTACGACTTGATGGCATGAA 57.673 42.857 3.81 0.63 0.00 2.57
5087 8962 3.669536 TGTACGACTTGATGGCATGAAA 58.330 40.909 3.81 0.00 0.00 2.69
5088 8963 4.260985 TGTACGACTTGATGGCATGAAAT 58.739 39.130 3.81 0.00 0.00 2.17
5089 8964 4.332543 TGTACGACTTGATGGCATGAAATC 59.667 41.667 3.81 0.25 0.00 2.17
5090 8965 3.346315 ACGACTTGATGGCATGAAATCA 58.654 40.909 3.81 1.35 0.00 2.57
5091 8966 3.949754 ACGACTTGATGGCATGAAATCAT 59.050 39.130 3.81 0.00 36.96 2.45
5092 8967 4.400251 ACGACTTGATGGCATGAAATCATT 59.600 37.500 3.81 0.00 33.61 2.57
5093 8968 5.105635 ACGACTTGATGGCATGAAATCATTT 60.106 36.000 3.81 0.00 33.61 2.32
5094 8969 5.457799 CGACTTGATGGCATGAAATCATTTC 59.542 40.000 3.81 2.87 40.08 2.17
5095 8970 6.540438 ACTTGATGGCATGAAATCATTTCT 57.460 33.333 3.81 0.00 40.32 2.52
5097 8972 6.816640 ACTTGATGGCATGAAATCATTTCTTG 59.183 34.615 17.76 17.76 43.65 3.02
5098 8973 6.532988 TGATGGCATGAAATCATTTCTTGA 57.467 33.333 23.68 9.19 43.56 3.02
5099 8974 6.569780 TGATGGCATGAAATCATTTCTTGAG 58.430 36.000 23.68 8.21 43.56 3.02
5100 8975 5.988310 TGGCATGAAATCATTTCTTGAGT 57.012 34.783 23.68 0.10 43.56 3.41
5101 8976 6.349243 TGGCATGAAATCATTTCTTGAGTT 57.651 33.333 23.68 0.00 44.84 3.01
5111 8986 9.603921 AAATCATTTCTTGAGTTCACATTGTTT 57.396 25.926 0.00 0.00 38.17 2.83
5112 8987 8.807667 ATCATTTCTTGAGTTCACATTGTTTC 57.192 30.769 0.00 0.00 37.89 2.78
5113 8988 6.912051 TCATTTCTTGAGTTCACATTGTTTCG 59.088 34.615 0.00 0.00 0.00 3.46
5114 8989 4.209452 TCTTGAGTTCACATTGTTTCGC 57.791 40.909 0.00 0.00 0.00 4.70
5116 8991 3.607422 TGAGTTCACATTGTTTCGCTG 57.393 42.857 0.00 0.00 0.00 5.18
5117 8992 3.202097 TGAGTTCACATTGTTTCGCTGA 58.798 40.909 0.00 0.00 0.00 4.26
5118 8993 3.002246 TGAGTTCACATTGTTTCGCTGAC 59.998 43.478 0.00 0.00 0.00 3.51
5119 8994 2.290641 AGTTCACATTGTTTCGCTGACC 59.709 45.455 0.00 0.00 0.00 4.02
5120 8995 1.960417 TCACATTGTTTCGCTGACCA 58.040 45.000 0.00 0.00 0.00 4.02
5137 9012 1.893544 CCAGCTATGGCAAGAGGATG 58.106 55.000 3.10 0.00 40.52 3.51
5138 9013 1.419012 CCAGCTATGGCAAGAGGATGA 59.581 52.381 3.10 0.00 40.52 2.92
5139 9014 2.040012 CCAGCTATGGCAAGAGGATGAT 59.960 50.000 3.10 0.00 40.52 2.45
5146 9021 7.181665 AGCTATGGCAAGAGGATGATCTATTTA 59.818 37.037 3.10 0.00 41.70 1.40
5148 9023 9.902684 CTATGGCAAGAGGATGATCTATTTATT 57.097 33.333 0.00 0.00 0.00 1.40
5151 9026 9.071276 TGGCAAGAGGATGATCTATTTATTTTC 57.929 33.333 0.00 0.00 0.00 2.29
5152 9027 8.518702 GGCAAGAGGATGATCTATTTATTTTCC 58.481 37.037 0.00 0.00 0.00 3.13
5155 9030 8.860780 AGAGGATGATCTATTTATTTTCCTGC 57.139 34.615 0.00 0.00 32.64 4.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
16 17 7.548196 TCTACTTGATTGTCTTCGTTTTGTT 57.452 32.000 0.00 0.00 0.00 2.83
19 20 5.758296 TGCTCTACTTGATTGTCTTCGTTTT 59.242 36.000 0.00 0.00 0.00 2.43
21 22 4.686554 GTGCTCTACTTGATTGTCTTCGTT 59.313 41.667 0.00 0.00 0.00 3.85
41 42 5.241662 AGACTACCTCAGATGAAAAAGTGC 58.758 41.667 0.00 0.00 0.00 4.40
60 61 0.460311 CCGATTACGCCTCCAAGACT 59.540 55.000 0.00 0.00 38.29 3.24
157 158 0.468029 GGGGTGATGCCAAATCCGAT 60.468 55.000 0.00 0.00 39.65 4.18
191 192 1.146930 ATGAGGGGCATAGCACACG 59.853 57.895 0.00 0.00 34.82 4.49
272 2149 7.653647 TCAAAACGTTGGTAGAAAAATAGCAT 58.346 30.769 0.00 0.00 35.29 3.79
282 2159 9.362539 GTTAGAATATCTCAAAACGTTGGTAGA 57.637 33.333 0.00 5.36 35.29 2.59
290 2461 8.425577 AGGACATGTTAGAATATCTCAAAACG 57.574 34.615 0.00 0.00 0.00 3.60
293 2464 9.177608 CCAAAGGACATGTTAGAATATCTCAAA 57.822 33.333 0.00 0.00 0.00 2.69
295 2466 8.089625 TCCAAAGGACATGTTAGAATATCTCA 57.910 34.615 0.00 0.00 0.00 3.27
360 2531 3.884091 ACGCACAAACCTATTGTAAACCA 59.116 39.130 0.00 0.00 0.00 3.67
377 2548 0.162933 CGACCATGTGTACAACGCAC 59.837 55.000 0.00 0.00 41.87 5.34
384 2555 3.056749 AGAAGGACTTCGACCATGTGTAC 60.057 47.826 6.43 0.00 43.97 2.90
388 2559 2.530701 AGAGAAGGACTTCGACCATGT 58.469 47.619 6.43 0.00 43.97 3.21
392 2563 4.011698 AGACTTAGAGAAGGACTTCGACC 58.988 47.826 6.43 1.34 43.97 4.79
397 2568 7.290481 AGGTTTACAAGACTTAGAGAAGGACTT 59.710 37.037 0.00 0.00 36.95 3.01
457 2628 2.752154 GCAAGATCCAGAATCCCAGCAT 60.752 50.000 0.00 0.00 34.67 3.79
466 2637 1.602237 GACCCGGCAAGATCCAGAA 59.398 57.895 0.00 0.00 0.00 3.02
469 2640 2.609299 TGGACCCGGCAAGATCCA 60.609 61.111 0.00 0.20 38.94 3.41
472 2643 1.613630 AGAGTGGACCCGGCAAGAT 60.614 57.895 0.00 0.00 0.00 2.40
498 2669 2.385803 GACCAGGAAGATAAGACCCGA 58.614 52.381 0.00 0.00 0.00 5.14
533 2704 0.980423 GGCTCTCTATGGGATGGGAC 59.020 60.000 0.00 0.00 0.00 4.46
539 2710 2.524394 GGCCGGCTCTCTATGGGA 60.524 66.667 28.56 0.00 0.00 4.37
540 2711 3.631046 GGGCCGGCTCTCTATGGG 61.631 72.222 28.56 0.00 0.00 4.00
586 2757 2.726351 GCGGCTAGACCAGAAGGCT 61.726 63.158 0.00 0.00 39.03 4.58
588 2759 2.105128 CGCGGCTAGACCAGAAGG 59.895 66.667 0.00 0.00 39.03 3.46
618 2819 8.887264 ATAATACATTTCTTTTGGTGGGTGTA 57.113 30.769 0.00 0.00 0.00 2.90
687 2890 3.692101 CGTGGCACCACTAAAATATGGAA 59.308 43.478 17.34 0.00 44.16 3.53
707 2943 2.351276 GGCCCAATCTGTCCACGT 59.649 61.111 0.00 0.00 0.00 4.49
708 2944 2.438434 GGGCCCAATCTGTCCACG 60.438 66.667 19.95 0.00 0.00 4.94
778 3015 0.178903 AGAGTGGGGAGTTGGCTGTA 60.179 55.000 0.00 0.00 0.00 2.74
785 3022 1.081277 GGGGAGAGAGTGGGGAGTT 59.919 63.158 0.00 0.00 0.00 3.01
786 3023 2.781406 GGGGAGAGAGTGGGGAGT 59.219 66.667 0.00 0.00 0.00 3.85
837 3087 3.400419 GGATAAGGGGGAAAAGGGAGTA 58.600 50.000 0.00 0.00 0.00 2.59
838 3088 2.215093 GGATAAGGGGGAAAAGGGAGT 58.785 52.381 0.00 0.00 0.00 3.85
892 3142 2.095059 TCCGCCGACTGTAGTAGAAAAC 60.095 50.000 0.00 0.00 0.00 2.43
899 3149 3.450115 GCCTCCGCCGACTGTAGT 61.450 66.667 0.00 0.00 0.00 2.73
935 3185 2.827190 ACGCTCGCAGGATCCGTA 60.827 61.111 5.98 0.00 31.15 4.02
936 3186 4.498520 CACGCTCGCAGGATCCGT 62.499 66.667 5.98 0.00 32.48 4.69
980 3230 3.885521 GCTGCTTGATCTGCCCGC 61.886 66.667 8.39 7.51 0.00 6.13
1032 3282 0.738412 AACGGCCGTACGGAAATCTG 60.738 55.000 37.62 24.84 38.39 2.90
1058 3312 3.602317 CGAGCGAGCGAGAAAGCG 61.602 66.667 0.00 0.00 43.00 4.68
1249 3508 1.463674 GCTGAATTTGGTGGGATCGT 58.536 50.000 0.00 0.00 0.00 3.73
1251 3510 0.740737 CCGCTGAATTTGGTGGGATC 59.259 55.000 4.03 0.00 0.00 3.36
1284 3543 4.222145 GTGGTTAGGACATTGGACTCTGTA 59.778 45.833 0.00 0.00 0.00 2.74
1285 3544 3.008049 GTGGTTAGGACATTGGACTCTGT 59.992 47.826 0.00 0.00 0.00 3.41
1286 3545 3.261897 AGTGGTTAGGACATTGGACTCTG 59.738 47.826 0.00 0.00 0.00 3.35
1287 3546 3.521727 AGTGGTTAGGACATTGGACTCT 58.478 45.455 0.00 0.00 0.00 3.24
1288 3547 3.983044 AGTGGTTAGGACATTGGACTC 57.017 47.619 0.00 0.00 0.00 3.36
1289 3548 4.020485 GTGTAGTGGTTAGGACATTGGACT 60.020 45.833 0.00 0.00 0.00 3.85
1291 3550 4.164981 AGTGTAGTGGTTAGGACATTGGA 58.835 43.478 0.00 0.00 0.00 3.53
1293 3552 6.070995 TCCTTAGTGTAGTGGTTAGGACATTG 60.071 42.308 0.00 0.00 0.00 2.82
1294 3553 6.021030 TCCTTAGTGTAGTGGTTAGGACATT 58.979 40.000 0.00 0.00 0.00 2.71
1295 3554 5.586877 TCCTTAGTGTAGTGGTTAGGACAT 58.413 41.667 0.00 0.00 0.00 3.06
1296 3555 5.001833 TCCTTAGTGTAGTGGTTAGGACA 57.998 43.478 0.00 0.00 0.00 4.02
1297 3556 4.142204 GCTCCTTAGTGTAGTGGTTAGGAC 60.142 50.000 0.00 0.00 0.00 3.85
1298 3557 4.021916 GCTCCTTAGTGTAGTGGTTAGGA 58.978 47.826 0.00 0.00 0.00 2.94
1299 3558 4.024670 AGCTCCTTAGTGTAGTGGTTAGG 58.975 47.826 0.00 0.00 0.00 2.69
1300 3559 4.705507 TGAGCTCCTTAGTGTAGTGGTTAG 59.294 45.833 12.15 0.00 0.00 2.34
1301 3560 4.461781 GTGAGCTCCTTAGTGTAGTGGTTA 59.538 45.833 12.15 0.00 0.00 2.85
1302 3561 3.258622 GTGAGCTCCTTAGTGTAGTGGTT 59.741 47.826 12.15 0.00 0.00 3.67
1303 3562 2.826725 GTGAGCTCCTTAGTGTAGTGGT 59.173 50.000 12.15 0.00 0.00 4.16
1304 3563 2.166664 GGTGAGCTCCTTAGTGTAGTGG 59.833 54.545 12.15 0.00 0.00 4.00
1305 3564 2.826128 TGGTGAGCTCCTTAGTGTAGTG 59.174 50.000 12.15 0.00 0.00 2.74
1306 3565 3.170991 TGGTGAGCTCCTTAGTGTAGT 57.829 47.619 12.15 0.00 0.00 2.73
1307 3566 3.181471 CCATGGTGAGCTCCTTAGTGTAG 60.181 52.174 12.15 0.00 0.00 2.74
1308 3567 2.766263 CCATGGTGAGCTCCTTAGTGTA 59.234 50.000 12.15 0.00 0.00 2.90
1309 3568 1.556911 CCATGGTGAGCTCCTTAGTGT 59.443 52.381 12.15 0.00 0.00 3.55
1310 3569 1.745141 GCCATGGTGAGCTCCTTAGTG 60.745 57.143 14.67 3.89 0.00 2.74
1311 3570 0.543749 GCCATGGTGAGCTCCTTAGT 59.456 55.000 14.67 0.00 0.00 2.24
1312 3571 0.179034 GGCCATGGTGAGCTCCTTAG 60.179 60.000 14.67 0.00 0.00 2.18
1313 3572 0.913934 TGGCCATGGTGAGCTCCTTA 60.914 55.000 14.67 0.00 0.00 2.69
1331 3590 0.536260 CTCTCTGTCAGCCCTCCTTG 59.464 60.000 0.00 0.00 0.00 3.61
1393 3652 5.898397 ACACTCCTTATCCTTAGGTTAGACC 59.102 44.000 0.00 0.00 38.99 3.85
1404 3663 6.042208 GCCTGAATTACTACACTCCTTATCCT 59.958 42.308 0.00 0.00 0.00 3.24
1411 3670 3.623510 GCAAGCCTGAATTACTACACTCC 59.376 47.826 0.00 0.00 0.00 3.85
1415 3674 4.009675 CCAAGCAAGCCTGAATTACTACA 58.990 43.478 0.00 0.00 0.00 2.74
1431 3691 6.313519 AGTATCTAAGAATTCCACCAAGCA 57.686 37.500 0.65 0.00 0.00 3.91
1434 3694 5.970640 AGGGAGTATCTAAGAATTCCACCAA 59.029 40.000 0.65 0.00 33.73 3.67
1453 3713 1.282157 AGAATTTTGGGACGGAGGGAG 59.718 52.381 0.00 0.00 0.00 4.30
1470 3730 9.645059 CATAGTCAGACAAATCTAAGACAAGAA 57.355 33.333 2.66 0.00 32.65 2.52
1471 3731 8.253810 CCATAGTCAGACAAATCTAAGACAAGA 58.746 37.037 2.66 0.00 32.65 3.02
1474 3734 7.718334 TCCATAGTCAGACAAATCTAAGACA 57.282 36.000 2.66 0.00 32.65 3.41
1476 3736 8.311395 ACATCCATAGTCAGACAAATCTAAGA 57.689 34.615 2.66 0.00 32.25 2.10
1479 3739 9.367160 TGATACATCCATAGTCAGACAAATCTA 57.633 33.333 2.66 0.00 32.25 1.98
1481 3741 8.893219 TTGATACATCCATAGTCAGACAAATC 57.107 34.615 2.66 0.00 0.00 2.17
1482 3742 8.489489 ACTTGATACATCCATAGTCAGACAAAT 58.511 33.333 2.66 0.00 0.00 2.32
1483 3743 7.851228 ACTTGATACATCCATAGTCAGACAAA 58.149 34.615 2.66 0.00 0.00 2.83
1484 3744 7.124147 TGACTTGATACATCCATAGTCAGACAA 59.876 37.037 2.66 0.00 35.61 3.18
1486 3746 6.920758 GTGACTTGATACATCCATAGTCAGAC 59.079 42.308 14.24 0.00 38.35 3.51
1488 3748 5.917447 CGTGACTTGATACATCCATAGTCAG 59.083 44.000 14.24 8.61 38.35 3.51
1489 3749 5.359860 ACGTGACTTGATACATCCATAGTCA 59.640 40.000 11.66 11.66 36.88 3.41
1491 3751 5.854010 ACGTGACTTGATACATCCATAGT 57.146 39.130 0.00 0.00 0.00 2.12
1492 3752 7.539712 AAAACGTGACTTGATACATCCATAG 57.460 36.000 0.00 0.00 0.00 2.23
1493 3753 8.255206 ACTAAAACGTGACTTGATACATCCATA 58.745 33.333 0.00 0.00 0.00 2.74
1494 3754 7.103641 ACTAAAACGTGACTTGATACATCCAT 58.896 34.615 0.00 0.00 0.00 3.41
1495 3755 6.460781 ACTAAAACGTGACTTGATACATCCA 58.539 36.000 0.00 0.00 0.00 3.41
1496 3756 6.963049 ACTAAAACGTGACTTGATACATCC 57.037 37.500 0.00 0.00 0.00 3.51
1506 3766 9.962783 GGATGTATCTAATACTAAAACGTGACT 57.037 33.333 0.00 0.00 36.70 3.41
1507 3767 8.899776 CGGATGTATCTAATACTAAAACGTGAC 58.100 37.037 0.00 0.00 36.70 3.67
1508 3768 8.623903 ACGGATGTATCTAATACTAAAACGTGA 58.376 33.333 0.00 0.00 36.70 4.35
1509 3769 8.792831 ACGGATGTATCTAATACTAAAACGTG 57.207 34.615 0.00 0.00 36.70 4.49
1525 3785 8.881743 GTTAGATTCGTCTAGATACGGATGTAT 58.118 37.037 2.64 0.00 41.14 2.29
1526 3786 7.874528 TGTTAGATTCGTCTAGATACGGATGTA 59.125 37.037 2.64 1.02 41.14 2.29
1527 3787 6.709397 TGTTAGATTCGTCTAGATACGGATGT 59.291 38.462 2.64 1.92 41.14 3.06
1528 3788 7.016466 GTGTTAGATTCGTCTAGATACGGATG 58.984 42.308 2.64 0.00 41.14 3.51
1529 3789 6.709397 TGTGTTAGATTCGTCTAGATACGGAT 59.291 38.462 0.00 0.00 43.73 4.18
1530 3790 6.051074 TGTGTTAGATTCGTCTAGATACGGA 58.949 40.000 0.00 0.00 43.05 4.69
1531 3791 6.296365 TGTGTTAGATTCGTCTAGATACGG 57.704 41.667 0.00 0.00 43.05 4.02
1532 3792 7.628235 TCTTGTGTTAGATTCGTCTAGATACG 58.372 38.462 0.00 0.00 44.19 3.06
1533 3793 9.953697 ATTCTTGTGTTAGATTCGTCTAGATAC 57.046 33.333 0.00 0.00 0.00 2.24
1535 3795 9.877178 AAATTCTTGTGTTAGATTCGTCTAGAT 57.123 29.630 0.00 0.00 0.00 1.98
1536 3796 9.706691 AAAATTCTTGTGTTAGATTCGTCTAGA 57.293 29.630 0.00 0.00 0.00 2.43
1537 3797 9.746711 CAAAATTCTTGTGTTAGATTCGTCTAG 57.253 33.333 0.00 0.00 0.00 2.43
1538 3798 8.717821 CCAAAATTCTTGTGTTAGATTCGTCTA 58.282 33.333 0.00 0.00 0.00 2.59
1539 3799 7.308589 CCCAAAATTCTTGTGTTAGATTCGTCT 60.309 37.037 0.00 0.00 0.00 4.18
1540 3800 6.801862 CCCAAAATTCTTGTGTTAGATTCGTC 59.198 38.462 0.00 0.00 0.00 4.20
1541 3801 6.488683 TCCCAAAATTCTTGTGTTAGATTCGT 59.511 34.615 0.00 0.00 0.00 3.85
1542 3802 6.801862 GTCCCAAAATTCTTGTGTTAGATTCG 59.198 38.462 0.00 0.00 0.00 3.34
1543 3803 6.801862 CGTCCCAAAATTCTTGTGTTAGATTC 59.198 38.462 0.00 0.00 0.00 2.52
1544 3804 6.294508 CCGTCCCAAAATTCTTGTGTTAGATT 60.295 38.462 0.00 0.00 0.00 2.40
1545 3805 5.183140 CCGTCCCAAAATTCTTGTGTTAGAT 59.817 40.000 0.00 0.00 0.00 1.98
1546 3806 4.517453 CCGTCCCAAAATTCTTGTGTTAGA 59.483 41.667 0.00 0.00 0.00 2.10
1547 3807 4.517453 TCCGTCCCAAAATTCTTGTGTTAG 59.483 41.667 0.00 0.00 0.00 2.34
1548 3808 4.462133 TCCGTCCCAAAATTCTTGTGTTA 58.538 39.130 0.00 0.00 0.00 2.41
1549 3809 3.292460 TCCGTCCCAAAATTCTTGTGTT 58.708 40.909 0.00 0.00 0.00 3.32
1550 3810 2.884639 CTCCGTCCCAAAATTCTTGTGT 59.115 45.455 0.00 0.00 0.00 3.72
1551 3811 2.228822 CCTCCGTCCCAAAATTCTTGTG 59.771 50.000 0.00 0.00 0.00 3.33
1552 3812 2.514803 CCTCCGTCCCAAAATTCTTGT 58.485 47.619 0.00 0.00 0.00 3.16
1553 3813 1.818674 CCCTCCGTCCCAAAATTCTTG 59.181 52.381 0.00 0.00 0.00 3.02
1557 3817 1.073098 ACTCCCTCCGTCCCAAAATT 58.927 50.000 0.00 0.00 0.00 1.82
1558 3818 1.961133 TACTCCCTCCGTCCCAAAAT 58.039 50.000 0.00 0.00 0.00 1.82
1563 3823 5.813513 TTATAAAATACTCCCTCCGTCCC 57.186 43.478 0.00 0.00 0.00 4.46
1573 3833 8.269424 CAGCACGACTGTCATTATAAAATACTC 58.731 37.037 8.73 0.00 41.86 2.59
1718 3981 3.392882 CCCCAAGAAAATTCTGCACAAC 58.607 45.455 0.00 0.00 37.65 3.32
1730 3993 0.776810 TCTCCACATGCCCCAAGAAA 59.223 50.000 0.00 0.00 0.00 2.52
1733 3996 0.033796 ATGTCTCCACATGCCCCAAG 60.034 55.000 0.00 0.00 42.05 3.61
1735 3998 3.839589 ATGTCTCCACATGCCCCA 58.160 55.556 0.00 0.00 42.05 4.96
1745 4009 3.369576 GGGTTCCAGTAAGTCATGTCTCC 60.370 52.174 0.00 0.00 0.00 3.71
1758 4022 3.876309 AATTAGTGTGTGGGTTCCAGT 57.124 42.857 0.00 0.00 32.34 4.00
1766 4030 7.277539 ACAAATTGACAACAAATTAGTGTGTGG 59.722 33.333 0.00 0.00 39.54 4.17
1800 4064 9.443323 TTTATACAAGCTCTAGCAAAACACATA 57.557 29.630 4.54 0.00 45.16 2.29
1813 4077 6.072838 CGGCATCATCATTTTATACAAGCTCT 60.073 38.462 0.00 0.00 0.00 4.09
1824 4088 3.674138 GCAGAACACGGCATCATCATTTT 60.674 43.478 0.00 0.00 0.00 1.82
1859 4123 5.004361 TGTTGGGTGGGAATTAAATCTGA 57.996 39.130 0.00 0.00 0.00 3.27
1871 4139 1.005805 TGGATTCTGATGTTGGGTGGG 59.994 52.381 0.00 0.00 0.00 4.61
1872 4140 2.512692 TGGATTCTGATGTTGGGTGG 57.487 50.000 0.00 0.00 0.00 4.61
1889 4157 6.934645 TCTAACCAAAGAAGTACACTTGATGG 59.065 38.462 15.61 15.61 36.11 3.51
1956 4234 9.945904 AAGCTAAAAGAAACACTAAGCTATACT 57.054 29.630 0.00 0.00 37.92 2.12
1987 4315 6.455646 CCGAGAAAATAGCAGTTACACATCAC 60.456 42.308 0.00 0.00 0.00 3.06
2058 4393 3.133003 AGCACCGACTACAGAGCAATAAT 59.867 43.478 0.00 0.00 0.00 1.28
2140 4480 7.013369 CCTCAGCCTTGGAAGTTAATAATAACC 59.987 40.741 0.00 0.00 41.98 2.85
2151 4491 1.140312 TTGACCTCAGCCTTGGAAGT 58.860 50.000 0.00 0.00 0.00 3.01
2161 4501 9.350357 CAGAAATGAACATAATTTTGACCTCAG 57.650 33.333 2.69 0.00 0.00 3.35
2185 4525 5.711976 ACCCAGATCCAAACTCAAATTACAG 59.288 40.000 0.00 0.00 0.00 2.74
2238 4600 7.738437 AATTTCATGGAAATATTGGACCAGT 57.262 32.000 4.77 0.00 40.77 4.00
2340 4702 1.068127 GACCATGCAGGAATTCCATGC 59.932 52.381 28.06 28.06 41.22 4.06
2350 4755 1.153208 GAGCAGAGGACCATGCAGG 60.153 63.158 20.20 0.00 45.01 4.85
2367 4772 7.035612 CGCTATATAACTATTCCATGCACAGA 58.964 38.462 0.00 0.00 0.00 3.41
2368 4773 7.035612 TCGCTATATAACTATTCCATGCACAG 58.964 38.462 0.00 0.00 0.00 3.66
2369 4774 6.930731 TCGCTATATAACTATTCCATGCACA 58.069 36.000 0.00 0.00 0.00 4.57
2370 4775 6.477033 CCTCGCTATATAACTATTCCATGCAC 59.523 42.308 0.00 0.00 0.00 4.57
2371 4776 6.379988 TCCTCGCTATATAACTATTCCATGCA 59.620 38.462 0.00 0.00 0.00 3.96
2400 4805 4.036027 AGCTACACACATAAATGCATCAGC 59.964 41.667 0.00 0.00 42.57 4.26
2479 4885 6.783708 AAAGTTATGACAGGTTGGTTTTCA 57.216 33.333 0.00 0.00 0.00 2.69
2480 4886 6.019075 GCAAAAGTTATGACAGGTTGGTTTTC 60.019 38.462 0.00 0.00 0.00 2.29
2494 5022 7.542025 AGGAGAATTTAGCAGCAAAAGTTATG 58.458 34.615 0.00 0.00 0.00 1.90
2503 5031 8.807948 AATTAGTAAAGGAGAATTTAGCAGCA 57.192 30.769 0.00 0.00 0.00 4.41
2537 5084 8.611051 AAGATGGTAGACAAAGGAACTACTAT 57.389 34.615 0.00 0.00 38.49 2.12
2598 5161 5.072600 ACCCAGTACTATTCTTGTTCCAACA 59.927 40.000 0.00 0.00 37.08 3.33
2599 5162 5.557866 ACCCAGTACTATTCTTGTTCCAAC 58.442 41.667 0.00 0.00 0.00 3.77
2600 5163 5.836024 ACCCAGTACTATTCTTGTTCCAA 57.164 39.130 0.00 0.00 0.00 3.53
2626 5189 2.739379 GCTGTGACTTGGCTTAGAAGTC 59.261 50.000 8.14 8.14 46.45 3.01
2686 5257 2.668457 CGGATGAGTTAACTGTGCTGAC 59.332 50.000 14.14 0.00 0.00 3.51
2691 5262 3.000727 GGGAACGGATGAGTTAACTGTG 58.999 50.000 14.14 0.45 34.00 3.66
2698 5269 4.469945 TGAAATAGAGGGAACGGATGAGTT 59.530 41.667 0.00 0.00 36.99 3.01
2702 5273 6.701340 TCATATGAAATAGAGGGAACGGATG 58.299 40.000 1.98 0.00 28.50 3.51
2744 5315 6.250819 CCACTAGCAAATATGTTCAAACTCG 58.749 40.000 0.00 0.00 0.00 4.18
2825 5706 8.713271 GGAACAACAAAAGTATGAAACAAAACA 58.287 29.630 0.00 0.00 0.00 2.83
2891 5778 0.034059 AGACTCTCCCTGCAAACACG 59.966 55.000 0.00 0.00 0.00 4.49
3006 5893 1.262151 GTCTTGCGCTTGTTCGGTTTA 59.738 47.619 9.73 0.00 0.00 2.01
3264 6151 1.135721 GGATCAAAGGCATGCCAAGAC 59.864 52.381 37.18 21.42 38.92 3.01
3354 6241 1.598962 GCAGCCACTGAGAACAGCA 60.599 57.895 0.00 0.00 46.95 4.41
3540 6427 2.975489 AGTTCTCTGTGTCCCTTCACAT 59.025 45.455 0.09 0.00 45.38 3.21
3564 6451 3.402628 TTGTAAACCTCAGCAGACCTC 57.597 47.619 0.00 0.00 0.00 3.85
3675 6562 2.084546 CGGTGGGAATCAAGTCCTTTC 58.915 52.381 0.00 0.00 37.85 2.62
3690 6577 2.669569 CTCACAACCTGGCGGTGG 60.670 66.667 15.65 1.93 44.73 4.61
3890 6777 2.673523 GTGAGCTGCCCAGATGGT 59.326 61.111 0.00 0.00 36.04 3.55
4005 6892 5.106908 GGCACTCTCAAACTCAATAACTGTC 60.107 44.000 0.00 0.00 0.00 3.51
4018 6905 0.813610 CACACACGGGCACTCTCAAA 60.814 55.000 0.00 0.00 0.00 2.69
4285 7376 5.302568 TCATGCAACTTGGTCAAAATCTCTT 59.697 36.000 0.00 0.00 0.00 2.85
4286 7377 4.828939 TCATGCAACTTGGTCAAAATCTCT 59.171 37.500 0.00 0.00 0.00 3.10
4322 7413 2.716017 CCGTCAGCTCCAGTCTCCC 61.716 68.421 0.00 0.00 0.00 4.30
4329 7420 2.159819 GAAGACTGCCGTCAGCTCCA 62.160 60.000 11.07 0.00 44.10 3.86
4353 7445 2.622436 GGAAGGTTCCTGTTCATCTCG 58.378 52.381 1.16 0.00 44.11 4.04
4430 7570 2.133281 TCCATGGACATTTGGCTCAG 57.867 50.000 11.44 0.00 32.80 3.35
4434 7574 1.826720 ACACATCCATGGACATTTGGC 59.173 47.619 18.99 0.00 32.80 4.52
4437 7577 6.423776 AGAAAAACACATCCATGGACATTT 57.576 33.333 18.99 12.08 0.00 2.32
4438 7578 6.225318 CAAGAAAAACACATCCATGGACATT 58.775 36.000 18.99 6.19 0.00 2.71
4630 7801 9.485206 GCAAAGATGATTCCAAAGCATAATAAT 57.515 29.630 0.00 0.00 37.69 1.28
4764 7951 9.440773 TCCATTTGTCAGATATATGATGTTAGC 57.559 33.333 2.87 0.00 0.00 3.09
4851 8038 8.343366 CACATATTTCATCTCTTTCATCCTGTG 58.657 37.037 0.00 0.00 0.00 3.66
4853 8040 7.501559 ACCACATATTTCATCTCTTTCATCCTG 59.498 37.037 0.00 0.00 0.00 3.86
4857 8044 8.847196 CATCACCACATATTTCATCTCTTTCAT 58.153 33.333 0.00 0.00 0.00 2.57
4860 8047 6.832384 AGCATCACCACATATTTCATCTCTTT 59.168 34.615 0.00 0.00 0.00 2.52
4863 8050 6.630444 AAGCATCACCACATATTTCATCTC 57.370 37.500 0.00 0.00 0.00 2.75
4865 8052 7.239271 CGATAAGCATCACCACATATTTCATC 58.761 38.462 0.00 0.00 0.00 2.92
4867 8054 5.469760 CCGATAAGCATCACCACATATTTCA 59.530 40.000 0.00 0.00 0.00 2.69
4873 8060 2.945008 CAACCGATAAGCATCACCACAT 59.055 45.455 0.00 0.00 0.00 3.21
4874 8061 2.290008 ACAACCGATAAGCATCACCACA 60.290 45.455 0.00 0.00 0.00 4.17
4875 8062 2.356135 ACAACCGATAAGCATCACCAC 58.644 47.619 0.00 0.00 0.00 4.16
4876 8063 2.779755 ACAACCGATAAGCATCACCA 57.220 45.000 0.00 0.00 0.00 4.17
4878 8065 4.083537 TGTCAAACAACCGATAAGCATCAC 60.084 41.667 0.00 0.00 0.00 3.06
4880 8067 4.154195 ACTGTCAAACAACCGATAAGCATC 59.846 41.667 0.00 0.00 0.00 3.91
4881 8068 4.072131 ACTGTCAAACAACCGATAAGCAT 58.928 39.130 0.00 0.00 0.00 3.79
4882 8069 3.472652 ACTGTCAAACAACCGATAAGCA 58.527 40.909 0.00 0.00 0.00 3.91
4884 8071 3.985279 TCGACTGTCAAACAACCGATAAG 59.015 43.478 8.73 0.00 30.76 1.73
4885 8072 3.979948 TCGACTGTCAAACAACCGATAA 58.020 40.909 8.73 0.00 30.76 1.75
4887 8074 2.519377 TCGACTGTCAAACAACCGAT 57.481 45.000 8.73 0.00 30.76 4.18
4888 8075 2.400399 GATCGACTGTCAAACAACCGA 58.600 47.619 8.73 0.00 36.78 4.69
4890 8077 2.400399 TCGATCGACTGTCAAACAACC 58.600 47.619 15.15 0.00 0.00 3.77
4891 8078 3.673338 TGATCGATCGACTGTCAAACAAC 59.327 43.478 22.06 0.00 0.00 3.32
4892 8079 3.908213 TGATCGATCGACTGTCAAACAA 58.092 40.909 22.06 0.00 0.00 2.83
4893 8080 3.569250 TGATCGATCGACTGTCAAACA 57.431 42.857 22.06 7.79 0.00 2.83
4895 8082 4.105486 GTGATGATCGATCGACTGTCAAA 58.895 43.478 22.06 10.38 33.17 2.69
4896 8083 3.128589 TGTGATGATCGATCGACTGTCAA 59.871 43.478 22.06 11.55 33.17 3.18
4897 8084 2.682856 TGTGATGATCGATCGACTGTCA 59.317 45.455 22.06 20.30 33.17 3.58
4899 8086 2.945668 TCTGTGATGATCGATCGACTGT 59.054 45.455 22.06 8.87 33.17 3.55
4900 8087 3.615849 TCTGTGATGATCGATCGACTG 57.384 47.619 22.06 17.79 33.17 3.51
4901 8088 3.879892 TCTTCTGTGATGATCGATCGACT 59.120 43.478 22.06 9.86 33.17 4.18
4902 8089 4.216366 TCTTCTGTGATGATCGATCGAC 57.784 45.455 22.06 14.65 33.17 4.20
4903 8090 4.516698 TCATCTTCTGTGATGATCGATCGA 59.483 41.667 21.86 21.86 45.29 3.59
4912 8099 7.711339 TCATCATCTCTTTCATCTTCTGTGATG 59.289 37.037 0.00 0.00 43.66 3.07
4913 8100 7.793036 TCATCATCTCTTTCATCTTCTGTGAT 58.207 34.615 0.00 0.00 0.00 3.06
4915 8102 7.711339 TCATCATCATCTCTTTCATCTTCTGTG 59.289 37.037 0.00 0.00 0.00 3.66
4916 8103 7.793036 TCATCATCATCTCTTTCATCTTCTGT 58.207 34.615 0.00 0.00 0.00 3.41
4918 8105 8.706521 TCTTCATCATCATCTCTTTCATCTTCT 58.293 33.333 0.00 0.00 0.00 2.85
4919 8106 8.890124 TCTTCATCATCATCTCTTTCATCTTC 57.110 34.615 0.00 0.00 0.00 2.87
4922 8109 8.875803 GCTATCTTCATCATCATCTCTTTCATC 58.124 37.037 0.00 0.00 0.00 2.92
4924 8111 6.867293 CGCTATCTTCATCATCATCTCTTTCA 59.133 38.462 0.00 0.00 0.00 2.69
4925 8112 7.062138 GTCGCTATCTTCATCATCATCTCTTTC 59.938 40.741 0.00 0.00 0.00 2.62
4926 8113 6.867816 GTCGCTATCTTCATCATCATCTCTTT 59.132 38.462 0.00 0.00 0.00 2.52
4928 8115 5.391843 CGTCGCTATCTTCATCATCATCTCT 60.392 44.000 0.00 0.00 0.00 3.10
4931 8118 4.727475 TCGTCGCTATCTTCATCATCATC 58.273 43.478 0.00 0.00 0.00 2.92
4932 8119 4.773323 TCGTCGCTATCTTCATCATCAT 57.227 40.909 0.00 0.00 0.00 2.45
4933 8120 4.216257 TCATCGTCGCTATCTTCATCATCA 59.784 41.667 0.00 0.00 0.00 3.07
4934 8121 4.727475 TCATCGTCGCTATCTTCATCATC 58.273 43.478 0.00 0.00 0.00 2.92
4935 8122 4.773323 TCATCGTCGCTATCTTCATCAT 57.227 40.909 0.00 0.00 0.00 2.45
4936 8123 4.216257 TCATCATCGTCGCTATCTTCATCA 59.784 41.667 0.00 0.00 0.00 3.07
4937 8124 4.727475 TCATCATCGTCGCTATCTTCATC 58.273 43.478 0.00 0.00 0.00 2.92
4938 8125 4.731720 CTCATCATCGTCGCTATCTTCAT 58.268 43.478 0.00 0.00 0.00 2.57
4939 8126 3.610349 GCTCATCATCGTCGCTATCTTCA 60.610 47.826 0.00 0.00 0.00 3.02
4940 8127 2.914214 GCTCATCATCGTCGCTATCTTC 59.086 50.000 0.00 0.00 0.00 2.87
4941 8128 2.352225 GGCTCATCATCGTCGCTATCTT 60.352 50.000 0.00 0.00 0.00 2.40
4942 8129 1.201181 GGCTCATCATCGTCGCTATCT 59.799 52.381 0.00 0.00 0.00 1.98
4943 8130 1.068264 TGGCTCATCATCGTCGCTATC 60.068 52.381 0.00 0.00 0.00 2.08
4944 8131 0.961753 TGGCTCATCATCGTCGCTAT 59.038 50.000 0.00 0.00 0.00 2.97
4945 8132 0.030773 GTGGCTCATCATCGTCGCTA 59.969 55.000 0.00 0.00 0.00 4.26
4946 8133 1.227089 GTGGCTCATCATCGTCGCT 60.227 57.895 0.00 0.00 0.00 4.93
4947 8134 1.227089 AGTGGCTCATCATCGTCGC 60.227 57.895 0.00 0.00 0.00 5.19
4948 8135 0.101219 TCAGTGGCTCATCATCGTCG 59.899 55.000 0.00 0.00 0.00 5.12
4949 8136 2.522836 ATCAGTGGCTCATCATCGTC 57.477 50.000 0.00 0.00 0.00 4.20
4950 8137 2.288702 GCTATCAGTGGCTCATCATCGT 60.289 50.000 0.00 0.00 0.00 3.73
4951 8138 2.288640 TGCTATCAGTGGCTCATCATCG 60.289 50.000 0.00 0.00 32.28 3.84
4952 8139 3.397849 TGCTATCAGTGGCTCATCATC 57.602 47.619 0.00 0.00 32.28 2.92
4953 8140 4.368565 AATGCTATCAGTGGCTCATCAT 57.631 40.909 0.00 0.00 32.28 2.45
4954 8141 3.851458 AATGCTATCAGTGGCTCATCA 57.149 42.857 0.00 0.00 32.28 3.07
4968 8155 9.944376 GGGTATCTATCAACATAGAAAATGCTA 57.056 33.333 0.00 0.00 43.55 3.49
4969 8156 8.439971 TGGGTATCTATCAACATAGAAAATGCT 58.560 33.333 0.00 0.00 43.55 3.79
4970 8157 8.621532 TGGGTATCTATCAACATAGAAAATGC 57.378 34.615 0.00 0.00 43.55 3.56
4971 8158 9.224267 CCTGGGTATCTATCAACATAGAAAATG 57.776 37.037 0.00 0.00 43.55 2.32
4975 8162 6.497259 GTCCCTGGGTATCTATCAACATAGAA 59.503 42.308 13.56 0.00 43.55 2.10
4978 8165 5.542635 GTGTCCCTGGGTATCTATCAACATA 59.457 44.000 13.56 0.00 0.00 2.29
4979 8166 4.348168 GTGTCCCTGGGTATCTATCAACAT 59.652 45.833 13.56 0.00 0.00 2.71
4981 8168 3.709653 TGTGTCCCTGGGTATCTATCAAC 59.290 47.826 13.56 0.23 0.00 3.18
4982 8169 4.002256 TGTGTCCCTGGGTATCTATCAA 57.998 45.455 13.56 0.00 0.00 2.57
4983 8170 3.699025 TGTGTCCCTGGGTATCTATCA 57.301 47.619 13.56 1.52 0.00 2.15
4984 8171 4.221703 CAGATGTGTCCCTGGGTATCTATC 59.778 50.000 13.56 11.21 0.00 2.08
4985 8172 4.163427 CAGATGTGTCCCTGGGTATCTAT 58.837 47.826 13.56 2.45 0.00 1.98
4986 8173 3.576861 CAGATGTGTCCCTGGGTATCTA 58.423 50.000 13.56 0.00 0.00 1.98
4988 8175 1.202698 GCAGATGTGTCCCTGGGTATC 60.203 57.143 13.56 12.18 0.00 2.24
4990 8177 0.546507 TGCAGATGTGTCCCTGGGTA 60.547 55.000 13.56 0.00 0.00 3.69
4992 8179 1.377725 GTGCAGATGTGTCCCTGGG 60.378 63.158 6.33 6.33 0.00 4.45
4993 8180 1.377725 GGTGCAGATGTGTCCCTGG 60.378 63.158 0.00 0.00 0.00 4.45
4994 8181 0.675837 CAGGTGCAGATGTGTCCCTG 60.676 60.000 13.08 13.08 37.35 4.45
4995 8182 1.130054 ACAGGTGCAGATGTGTCCCT 61.130 55.000 3.00 0.00 0.00 4.20
4998 8185 0.250467 ACCACAGGTGCAGATGTGTC 60.250 55.000 22.92 0.00 44.24 3.67
5002 8189 1.162698 CTTGACCACAGGTGCAGATG 58.837 55.000 0.00 0.00 35.25 2.90
5007 8882 1.227943 TGCTCTTGACCACAGGTGC 60.228 57.895 0.00 0.00 40.97 5.01
5010 8885 0.673022 GCTCTGCTCTTGACCACAGG 60.673 60.000 0.00 0.00 0.00 4.00
5011 8886 0.034476 TGCTCTGCTCTTGACCACAG 59.966 55.000 0.00 0.00 0.00 3.66
5012 8887 0.034476 CTGCTCTGCTCTTGACCACA 59.966 55.000 0.00 0.00 0.00 4.17
5014 8889 0.607112 CTCTGCTCTGCTCTTGACCA 59.393 55.000 0.00 0.00 0.00 4.02
5016 8891 0.037512 TGCTCTGCTCTGCTCTTGAC 60.038 55.000 0.00 0.00 0.00 3.18
5019 8894 1.597989 CCTGCTCTGCTCTGCTCTT 59.402 57.895 0.00 0.00 0.00 2.85
5020 8895 2.360767 CCCTGCTCTGCTCTGCTCT 61.361 63.158 0.00 0.00 0.00 4.09
5023 8898 3.700831 ATGCCCTGCTCTGCTCTGC 62.701 63.158 0.00 0.00 0.00 4.26
5028 8903 1.734137 CATTCATGCCCTGCTCTGC 59.266 57.895 0.00 0.00 0.00 4.26
5029 8904 0.106868 TCCATTCATGCCCTGCTCTG 60.107 55.000 0.00 0.00 0.00 3.35
5031 8906 1.245732 GATCCATTCATGCCCTGCTC 58.754 55.000 0.00 0.00 0.00 4.26
5033 8908 0.959553 CTGATCCATTCATGCCCTGC 59.040 55.000 0.00 0.00 32.72 4.85
5035 8910 2.415624 TCTCTGATCCATTCATGCCCT 58.584 47.619 0.00 0.00 32.72 5.19
5036 8911 2.945080 TCTCTGATCCATTCATGCCC 57.055 50.000 0.00 0.00 32.72 5.36
5043 8918 5.369409 TCTTTGCAGATCTCTGATCCATT 57.631 39.130 11.34 0.00 46.59 3.16
5044 8919 5.163184 ACATCTTTGCAGATCTCTGATCCAT 60.163 40.000 11.34 0.00 46.59 3.41
5046 8921 4.706035 ACATCTTTGCAGATCTCTGATCC 58.294 43.478 11.34 0.00 46.59 3.36
5047 8922 5.401972 CGTACATCTTTGCAGATCTCTGATC 59.598 44.000 11.34 0.00 46.59 2.92
5048 8923 5.068329 TCGTACATCTTTGCAGATCTCTGAT 59.932 40.000 11.34 0.00 46.59 2.90
5049 8924 4.399303 TCGTACATCTTTGCAGATCTCTGA 59.601 41.667 11.34 0.00 46.59 3.27
5050 8925 4.502282 GTCGTACATCTTTGCAGATCTCTG 59.498 45.833 2.75 2.75 46.40 3.35
5051 8926 4.400884 AGTCGTACATCTTTGCAGATCTCT 59.599 41.667 0.00 0.00 37.71 3.10
5052 8927 4.677584 AGTCGTACATCTTTGCAGATCTC 58.322 43.478 0.00 0.00 37.71 2.75
5053 8928 4.727507 AGTCGTACATCTTTGCAGATCT 57.272 40.909 0.00 0.00 37.71 2.75
5055 8930 4.820897 TCAAGTCGTACATCTTTGCAGAT 58.179 39.130 0.00 0.00 40.79 2.90
5056 8931 4.251543 TCAAGTCGTACATCTTTGCAGA 57.748 40.909 0.00 0.00 0.00 4.26
5058 8933 3.684305 CCATCAAGTCGTACATCTTTGCA 59.316 43.478 0.00 0.00 0.00 4.08
5059 8934 3.485877 GCCATCAAGTCGTACATCTTTGC 60.486 47.826 0.00 0.00 0.00 3.68
5062 8937 3.610040 TGCCATCAAGTCGTACATCTT 57.390 42.857 0.00 0.00 0.00 2.40
5063 8938 3.132824 TCATGCCATCAAGTCGTACATCT 59.867 43.478 0.00 0.00 0.00 2.90
5064 8939 3.457234 TCATGCCATCAAGTCGTACATC 58.543 45.455 0.00 0.00 0.00 3.06
5065 8940 3.541996 TCATGCCATCAAGTCGTACAT 57.458 42.857 0.00 0.00 0.00 2.29
5068 8943 4.512484 TGATTTCATGCCATCAAGTCGTA 58.488 39.130 4.60 0.00 0.00 3.43
5070 8945 4.563337 ATGATTTCATGCCATCAAGTCG 57.437 40.909 9.83 0.00 34.83 4.18
5072 8947 6.540438 AGAAATGATTTCATGCCATCAAGT 57.460 33.333 19.02 2.90 42.10 3.16
5074 8949 6.937392 TCAAGAAATGATTTCATGCCATCAA 58.063 32.000 19.02 0.00 42.10 2.57
5075 8950 6.153851 ACTCAAGAAATGATTTCATGCCATCA 59.846 34.615 19.02 8.57 42.10 3.07
5076 8951 6.570692 ACTCAAGAAATGATTTCATGCCATC 58.429 36.000 19.02 0.00 42.10 3.51
5077 8952 6.540438 ACTCAAGAAATGATTTCATGCCAT 57.460 33.333 19.02 4.70 42.10 4.40
5078 8953 5.988310 ACTCAAGAAATGATTTCATGCCA 57.012 34.783 19.02 3.12 42.10 4.92
5079 8954 6.392354 TGAACTCAAGAAATGATTTCATGCC 58.608 36.000 19.02 8.49 46.62 4.40
5085 8960 9.603921 AAACAATGTGAACTCAAGAAATGATTT 57.396 25.926 0.00 0.00 37.44 2.17
5086 8961 9.252962 GAAACAATGTGAACTCAAGAAATGATT 57.747 29.630 0.00 0.00 37.44 2.57
5087 8962 7.592533 CGAAACAATGTGAACTCAAGAAATGAT 59.407 33.333 0.00 0.00 37.44 2.45
5088 8963 6.912051 CGAAACAATGTGAACTCAAGAAATGA 59.088 34.615 0.00 0.00 36.38 2.57
5089 8964 6.345250 GCGAAACAATGTGAACTCAAGAAATG 60.345 38.462 0.00 0.00 0.00 2.32
5090 8965 5.687285 GCGAAACAATGTGAACTCAAGAAAT 59.313 36.000 0.00 0.00 0.00 2.17
5091 8966 5.034152 GCGAAACAATGTGAACTCAAGAAA 58.966 37.500 0.00 0.00 0.00 2.52
5092 8967 4.335315 AGCGAAACAATGTGAACTCAAGAA 59.665 37.500 0.00 0.00 0.00 2.52
5093 8968 3.876914 AGCGAAACAATGTGAACTCAAGA 59.123 39.130 0.00 0.00 0.00 3.02
5094 8969 3.970610 CAGCGAAACAATGTGAACTCAAG 59.029 43.478 0.00 0.00 0.00 3.02
5095 8970 3.625313 TCAGCGAAACAATGTGAACTCAA 59.375 39.130 0.00 0.00 0.00 3.02
5097 8972 3.545633 GTCAGCGAAACAATGTGAACTC 58.454 45.455 0.00 0.00 0.00 3.01
5098 8973 2.290641 GGTCAGCGAAACAATGTGAACT 59.709 45.455 0.00 0.00 0.00 3.01
5099 8974 2.032799 TGGTCAGCGAAACAATGTGAAC 59.967 45.455 0.00 0.00 0.00 3.18
5100 8975 2.290367 CTGGTCAGCGAAACAATGTGAA 59.710 45.455 0.00 0.00 0.00 3.18
5101 8976 1.872952 CTGGTCAGCGAAACAATGTGA 59.127 47.619 0.00 0.00 0.00 3.58
5102 8977 1.664016 GCTGGTCAGCGAAACAATGTG 60.664 52.381 7.23 0.00 45.29 3.21
5104 8979 3.389741 GCTGGTCAGCGAAACAATG 57.610 52.632 7.23 0.00 45.29 2.82
5114 8989 1.474677 CCTCTTGCCATAGCTGGTCAG 60.475 57.143 0.00 0.00 45.10 3.51
5116 8991 0.833287 TCCTCTTGCCATAGCTGGTC 59.167 55.000 0.00 0.00 45.10 4.02
5117 8992 1.142465 CATCCTCTTGCCATAGCTGGT 59.858 52.381 0.00 0.00 45.10 4.00
5118 8993 1.419012 TCATCCTCTTGCCATAGCTGG 59.581 52.381 0.00 0.00 46.17 4.85
5119 8994 2.924757 TCATCCTCTTGCCATAGCTG 57.075 50.000 0.00 0.00 40.80 4.24
5120 8995 3.249752 AGATCATCCTCTTGCCATAGCT 58.750 45.455 0.00 0.00 40.80 3.32
5124 8999 9.597681 AAAATAAATAGATCATCCTCTTGCCAT 57.402 29.630 0.00 0.00 0.00 4.40
5127 9002 9.294614 AGGAAAATAAATAGATCATCCTCTTGC 57.705 33.333 0.00 0.00 30.39 4.01
5129 9004 9.294614 GCAGGAAAATAAATAGATCATCCTCTT 57.705 33.333 0.00 0.00 33.91 2.85
5130 9005 8.860780 GCAGGAAAATAAATAGATCATCCTCT 57.139 34.615 0.00 0.00 33.91 3.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.