Multiple sequence alignment - TraesCS3B01G595800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G595800 chr3B 100.000 4139 0 0 1 4139 818850911 818846773 0.000000e+00 7644.0
1 TraesCS3B01G595800 chr3D 93.147 1649 68 22 38 1665 608666967 608668591 0.000000e+00 2377.0
2 TraesCS3B01G595800 chr3D 91.600 1738 91 23 1768 3489 608668589 608670287 0.000000e+00 2350.0
3 TraesCS3B01G595800 chr3D 97.500 40 1 0 3490 3529 608670307 608670346 7.420000e-08 69.4
4 TraesCS3B01G595800 chr3A 90.112 1426 100 20 1768 3178 741754788 741756187 0.000000e+00 1814.0
5 TraesCS3B01G595800 chr3A 91.967 971 56 10 702 1665 741753835 741754790 0.000000e+00 1341.0
6 TraesCS3B01G595800 chr3A 86.892 473 28 14 192 664 741753395 741753833 2.220000e-137 499.0
7 TraesCS3B01G595800 chr3A 87.458 295 22 7 3204 3493 741756183 741756467 3.990000e-85 326.0
8 TraesCS3B01G595800 chr3A 93.264 193 11 2 4 194 741753138 741753330 2.440000e-72 283.0
9 TraesCS3B01G595800 chr2A 96.460 113 3 1 1664 1775 36744531 36744643 7.070000e-43 185.0
10 TraesCS3B01G595800 chr2A 93.333 120 8 0 1660 1779 685627218 685627337 1.180000e-40 178.0
11 TraesCS3B01G595800 chr6B 96.364 110 4 0 1663 1772 136452677 136452568 9.140000e-42 182.0
12 TraesCS3B01G595800 chrUn 95.536 112 5 0 1663 1774 267451403 267451514 3.290000e-41 180.0
13 TraesCS3B01G595800 chrUn 95.536 112 5 0 1663 1774 340254771 340254882 3.290000e-41 180.0
14 TraesCS3B01G595800 chr5B 95.536 112 5 0 1663 1774 392086302 392086413 3.290000e-41 180.0
15 TraesCS3B01G595800 chr5B 95.536 112 5 0 1663 1774 392126339 392126450 3.290000e-41 180.0
16 TraesCS3B01G595800 chr5A 95.370 108 5 0 1663 1770 368170798 368170691 5.500000e-39 172.0
17 TraesCS3B01G595800 chr2B 85.000 160 18 6 1616 1770 682910621 682910779 1.540000e-34 158.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G595800 chr3B 818846773 818850911 4138 True 7644.0 7644 100.000000 1 4139 1 chr3B.!!$R1 4138
1 TraesCS3B01G595800 chr3D 608666967 608670346 3379 False 1598.8 2377 94.082333 38 3529 3 chr3D.!!$F1 3491
2 TraesCS3B01G595800 chr3A 741753138 741756467 3329 False 852.6 1814 89.938600 4 3493 5 chr3A.!!$F1 3489

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
520 600 1.301401 TGAGTGTGCGTGCCCTAAC 60.301 57.895 0.00 0.00 0.00 2.34 F
1596 1694 0.034767 GCCCCAACCCAAGGTAGTAC 60.035 60.000 0.00 0.00 33.12 2.73 F
1678 1782 0.172803 CTTGTACTCCCTCCGTTCGG 59.827 60.000 4.74 4.74 0.00 4.30 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1752 1856 0.038744 ACTACTCCCTCCGTTCGGAA 59.961 55.0 14.79 0.04 33.41 4.30 R
3102 3230 0.033504 GGACGGCCATGTCGATGTAT 59.966 55.0 0.00 0.00 39.83 2.29 R
3588 3744 0.689623 ACAGTGCCCCTGAAGAGAAG 59.310 55.0 7.43 0.00 44.49 2.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
43 44 8.532977 TTTAATGGATTTTTGTTGAAGCTAGC 57.467 30.769 6.62 6.62 0.00 3.42
117 118 7.770433 TCAGTAGTAGCATTACATGAATTTGCT 59.230 33.333 16.78 16.78 32.89 3.91
172 185 9.841880 GATTTTAACCTTTCAAGTATTCACCTC 57.158 33.333 0.00 0.00 0.00 3.85
251 330 5.537188 GAACTCTAGATGGGCAGTAGATTG 58.463 45.833 0.00 0.00 0.00 2.67
414 494 4.742167 TGGTTGACAATTGCATTTGTTACG 59.258 37.500 23.63 2.00 39.85 3.18
422 502 6.074569 ACAATTGCATTTGTTACGTACTTTGC 60.075 34.615 18.74 1.64 36.43 3.68
434 514 2.031191 CGTACTTTGCGTCAGTTGGTTT 59.969 45.455 0.00 0.00 0.00 3.27
442 522 2.766313 CGTCAGTTGGTTTGATCCTCA 58.234 47.619 0.00 0.00 0.00 3.86
458 538 6.738114 TGATCCTCAATTGTTCTTTGTCAAC 58.262 36.000 5.13 0.00 0.00 3.18
520 600 1.301401 TGAGTGTGCGTGCCCTAAC 60.301 57.895 0.00 0.00 0.00 2.34
529 609 2.421775 TGCGTGCCCTAACATAAACATG 59.578 45.455 0.00 0.00 0.00 3.21
530 610 2.794631 GCGTGCCCTAACATAAACATGC 60.795 50.000 0.00 0.00 33.45 4.06
531 611 2.421775 CGTGCCCTAACATAAACATGCA 59.578 45.455 0.00 0.00 0.00 3.96
532 612 3.066621 CGTGCCCTAACATAAACATGCAT 59.933 43.478 0.00 0.00 0.00 3.96
655 735 8.085296 CCTGCTACTACTACTATTTGATCCTTG 58.915 40.741 0.00 0.00 0.00 3.61
656 736 8.762481 TGCTACTACTACTATTTGATCCTTGA 57.238 34.615 0.00 0.00 0.00 3.02
657 737 8.851145 TGCTACTACTACTATTTGATCCTTGAG 58.149 37.037 0.00 0.00 0.00 3.02
658 738 7.810759 GCTACTACTACTATTTGATCCTTGAGC 59.189 40.741 0.00 0.00 0.00 4.26
659 739 7.906199 ACTACTACTATTTGATCCTTGAGCT 57.094 36.000 0.00 0.00 0.00 4.09
716 803 4.521130 TGTCCAGCAGAAGTAAGTAGTG 57.479 45.455 0.00 0.00 0.00 2.74
742 829 3.705072 ACACTGGAGTAGTTACCATAGCC 59.295 47.826 0.00 0.00 37.60 3.93
761 848 4.729868 AGCCAGGGTGAATATACAATTCC 58.270 43.478 0.00 0.00 0.00 3.01
788 876 3.349927 GTGTGGTAATTAGTCAACCCCC 58.650 50.000 0.00 0.00 31.97 5.40
960 1048 6.550108 ACACACCCCAGATATAGTTAGTAGTG 59.450 42.308 0.00 0.00 0.00 2.74
1123 1217 4.170062 CAACGCCATCGCCAGCAG 62.170 66.667 0.00 0.00 39.84 4.24
1127 1221 3.524606 GCCATCGCCAGCAGCAAT 61.525 61.111 0.00 0.00 44.04 3.56
1155 1249 3.989595 GCCGCGAGCGCTGATAAC 61.990 66.667 18.48 0.00 39.32 1.89
1179 1273 4.589374 TCTTCTTCTTCCGATAAGGGGATC 59.411 45.833 0.00 0.00 41.52 3.36
1224 1318 3.781307 CGCCGGGAGTCCATGGAA 61.781 66.667 18.20 0.00 0.00 3.53
1370 1464 2.882876 CCCAGTGTACGTCCCTCG 59.117 66.667 0.00 0.00 46.00 4.63
1383 1477 2.607282 CGTCCCTCGTATCTATGCCAAC 60.607 54.545 0.00 0.00 34.52 3.77
1393 1487 5.525745 CGTATCTATGCCAACAACAACCATA 59.474 40.000 0.00 0.00 0.00 2.74
1441 1539 5.539574 TCAATTTGGACATCTGTGTGGAAAT 59.460 36.000 0.00 0.00 39.09 2.17
1593 1691 1.000896 CAGCCCCAACCCAAGGTAG 60.001 63.158 0.00 0.00 33.12 3.18
1596 1694 0.034767 GCCCCAACCCAAGGTAGTAC 60.035 60.000 0.00 0.00 33.12 2.73
1597 1695 1.665137 CCCCAACCCAAGGTAGTACT 58.335 55.000 0.00 0.00 33.12 2.73
1598 1696 2.836667 CCCCAACCCAAGGTAGTACTA 58.163 52.381 0.00 0.00 33.12 1.82
1599 1697 3.390819 CCCCAACCCAAGGTAGTACTAT 58.609 50.000 5.75 0.00 33.12 2.12
1600 1698 3.784202 CCCCAACCCAAGGTAGTACTATT 59.216 47.826 5.75 0.00 33.12 1.73
1601 1699 4.228895 CCCCAACCCAAGGTAGTACTATTT 59.771 45.833 5.75 1.54 33.12 1.40
1602 1700 5.434408 CCCAACCCAAGGTAGTACTATTTC 58.566 45.833 5.75 0.00 33.12 2.17
1618 1722 7.881751 AGTACTATTTCTTTACAGTTTCACCCC 59.118 37.037 0.00 0.00 0.00 4.95
1628 1732 3.075283 ACAGTTTCACCCCATATCAACCA 59.925 43.478 0.00 0.00 0.00 3.67
1647 1751 2.037641 CCAATCTCTCATGGCCGACATA 59.962 50.000 0.00 0.00 37.84 2.29
1657 1761 6.260050 TCTCATGGCCGACATAACTTTTAATC 59.740 38.462 0.00 0.00 37.84 1.75
1662 1766 6.027749 GGCCGACATAACTTTTAATCACTTG 58.972 40.000 0.00 0.00 0.00 3.16
1663 1767 6.349033 GGCCGACATAACTTTTAATCACTTGT 60.349 38.462 0.00 0.00 0.00 3.16
1664 1768 7.148373 GGCCGACATAACTTTTAATCACTTGTA 60.148 37.037 0.00 0.00 0.00 2.41
1665 1769 7.691050 GCCGACATAACTTTTAATCACTTGTAC 59.309 37.037 0.00 0.00 0.00 2.90
1666 1770 8.932791 CCGACATAACTTTTAATCACTTGTACT 58.067 33.333 0.00 0.00 0.00 2.73
1667 1771 9.953825 CGACATAACTTTTAATCACTTGTACTC 57.046 33.333 0.00 0.00 0.00 2.59
1669 1773 9.227777 ACATAACTTTTAATCACTTGTACTCCC 57.772 33.333 0.00 0.00 0.00 4.30
1670 1774 9.449719 CATAACTTTTAATCACTTGTACTCCCT 57.550 33.333 0.00 0.00 0.00 4.20
1671 1775 7.981102 AACTTTTAATCACTTGTACTCCCTC 57.019 36.000 0.00 0.00 0.00 4.30
1672 1776 6.473758 ACTTTTAATCACTTGTACTCCCTCC 58.526 40.000 0.00 0.00 0.00 4.30
1673 1777 4.730949 TTAATCACTTGTACTCCCTCCG 57.269 45.455 0.00 0.00 0.00 4.63
1674 1778 2.233305 ATCACTTGTACTCCCTCCGT 57.767 50.000 0.00 0.00 0.00 4.69
1675 1779 2.005370 TCACTTGTACTCCCTCCGTT 57.995 50.000 0.00 0.00 0.00 4.44
1676 1780 1.891150 TCACTTGTACTCCCTCCGTTC 59.109 52.381 0.00 0.00 0.00 3.95
1677 1781 0.886563 ACTTGTACTCCCTCCGTTCG 59.113 55.000 0.00 0.00 0.00 3.95
1678 1782 0.172803 CTTGTACTCCCTCCGTTCGG 59.827 60.000 4.74 4.74 0.00 4.30
1679 1783 0.251297 TTGTACTCCCTCCGTTCGGA 60.251 55.000 13.34 13.34 0.00 4.55
1680 1784 0.251297 TGTACTCCCTCCGTTCGGAA 60.251 55.000 14.79 0.04 33.41 4.30
1681 1785 1.109609 GTACTCCCTCCGTTCGGAAT 58.890 55.000 14.79 2.09 33.41 3.01
1682 1786 1.479730 GTACTCCCTCCGTTCGGAATT 59.520 52.381 14.79 0.00 33.41 2.17
1683 1787 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
1684 1788 1.479730 ACTCCCTCCGTTCGGAATTAC 59.520 52.381 14.79 0.00 33.41 1.89
1685 1789 1.755380 CTCCCTCCGTTCGGAATTACT 59.245 52.381 14.79 0.00 33.41 2.24
1686 1790 2.167900 CTCCCTCCGTTCGGAATTACTT 59.832 50.000 14.79 0.00 33.41 2.24
1687 1791 2.093869 TCCCTCCGTTCGGAATTACTTG 60.094 50.000 14.79 1.97 33.41 3.16
1688 1792 2.354403 CCCTCCGTTCGGAATTACTTGT 60.354 50.000 14.79 0.00 33.41 3.16
1689 1793 2.928116 CCTCCGTTCGGAATTACTTGTC 59.072 50.000 14.79 0.00 33.41 3.18
1690 1794 3.368116 CCTCCGTTCGGAATTACTTGTCT 60.368 47.826 14.79 0.00 33.41 3.41
1691 1795 3.841643 TCCGTTCGGAATTACTTGTCTC 58.158 45.455 11.66 0.00 0.00 3.36
1692 1796 2.597305 CCGTTCGGAATTACTTGTCTCG 59.403 50.000 5.19 0.00 0.00 4.04
1693 1797 3.495193 CGTTCGGAATTACTTGTCTCGA 58.505 45.455 0.00 0.00 0.00 4.04
1694 1798 3.542704 CGTTCGGAATTACTTGTCTCGAG 59.457 47.826 5.93 5.93 0.00 4.04
1695 1799 4.670992 CGTTCGGAATTACTTGTCTCGAGA 60.671 45.833 12.08 12.08 0.00 4.04
1696 1800 5.159209 GTTCGGAATTACTTGTCTCGAGAA 58.841 41.667 18.55 0.91 0.00 2.87
1697 1801 5.578005 TCGGAATTACTTGTCTCGAGAAT 57.422 39.130 18.55 2.59 0.00 2.40
1698 1802 5.340803 TCGGAATTACTTGTCTCGAGAATG 58.659 41.667 18.55 12.40 0.00 2.67
1699 1803 4.504461 CGGAATTACTTGTCTCGAGAATGG 59.496 45.833 18.55 11.99 0.00 3.16
1700 1804 5.661458 GGAATTACTTGTCTCGAGAATGGA 58.339 41.667 18.55 3.96 0.00 3.41
1701 1805 6.284459 GGAATTACTTGTCTCGAGAATGGAT 58.716 40.000 18.55 4.74 0.00 3.41
1702 1806 6.201806 GGAATTACTTGTCTCGAGAATGGATG 59.798 42.308 18.55 7.09 0.00 3.51
1703 1807 5.661056 TTACTTGTCTCGAGAATGGATGT 57.339 39.130 18.55 12.31 0.00 3.06
1704 1808 6.769134 TTACTTGTCTCGAGAATGGATGTA 57.231 37.500 18.55 11.38 0.00 2.29
1705 1809 5.860941 ACTTGTCTCGAGAATGGATGTAT 57.139 39.130 18.55 0.00 0.00 2.29
1706 1810 5.837437 ACTTGTCTCGAGAATGGATGTATC 58.163 41.667 18.55 0.74 0.00 2.24
1707 1811 5.596361 ACTTGTCTCGAGAATGGATGTATCT 59.404 40.000 18.55 0.00 0.00 1.98
1708 1812 6.773200 ACTTGTCTCGAGAATGGATGTATCTA 59.227 38.462 18.55 0.00 0.00 1.98
1709 1813 6.809630 TGTCTCGAGAATGGATGTATCTAG 57.190 41.667 18.55 0.00 0.00 2.43
1710 1814 6.534634 TGTCTCGAGAATGGATGTATCTAGA 58.465 40.000 18.55 0.00 0.00 2.43
1711 1815 6.998673 TGTCTCGAGAATGGATGTATCTAGAA 59.001 38.462 18.55 0.00 0.00 2.10
1712 1816 7.041030 TGTCTCGAGAATGGATGTATCTAGAAC 60.041 40.741 18.55 0.00 0.00 3.01
1713 1817 7.174253 GTCTCGAGAATGGATGTATCTAGAACT 59.826 40.741 18.55 0.00 0.00 3.01
1714 1818 8.376270 TCTCGAGAATGGATGTATCTAGAACTA 58.624 37.037 14.01 0.00 0.00 2.24
1715 1819 8.919777 TCGAGAATGGATGTATCTAGAACTAA 57.080 34.615 0.00 0.00 0.00 2.24
1716 1820 9.350951 TCGAGAATGGATGTATCTAGAACTAAA 57.649 33.333 0.00 0.00 0.00 1.85
1717 1821 9.967346 CGAGAATGGATGTATCTAGAACTAAAA 57.033 33.333 0.00 0.00 0.00 1.52
1754 1858 8.895932 ACATCTATTTTTGCGACAAGTAATTC 57.104 30.769 0.00 0.00 0.00 2.17
1755 1859 7.968405 ACATCTATTTTTGCGACAAGTAATTCC 59.032 33.333 0.00 0.00 0.00 3.01
1756 1860 6.539324 TCTATTTTTGCGACAAGTAATTCCG 58.461 36.000 0.00 0.00 0.00 4.30
1757 1861 4.815040 TTTTTGCGACAAGTAATTCCGA 57.185 36.364 0.00 0.00 0.00 4.55
1758 1862 4.815040 TTTTGCGACAAGTAATTCCGAA 57.185 36.364 0.00 0.00 0.00 4.30
1759 1863 3.799137 TTGCGACAAGTAATTCCGAAC 57.201 42.857 0.00 0.00 0.00 3.95
1760 1864 1.722464 TGCGACAAGTAATTCCGAACG 59.278 47.619 0.00 0.00 0.00 3.95
1761 1865 1.060122 GCGACAAGTAATTCCGAACGG 59.940 52.381 6.94 6.94 0.00 4.44
1762 1866 2.598589 CGACAAGTAATTCCGAACGGA 58.401 47.619 12.04 12.04 43.52 4.69
1763 1867 2.597305 CGACAAGTAATTCCGAACGGAG 59.403 50.000 15.34 5.60 46.06 4.63
1764 1868 2.928116 GACAAGTAATTCCGAACGGAGG 59.072 50.000 15.34 4.52 46.06 4.30
1765 1869 2.277084 CAAGTAATTCCGAACGGAGGG 58.723 52.381 15.34 0.00 46.06 4.30
1766 1870 1.856629 AGTAATTCCGAACGGAGGGA 58.143 50.000 15.34 2.49 46.06 4.20
1821 1925 9.881529 CAATTTTGCAAGCAATTTTACTTACAT 57.118 25.926 8.46 0.00 35.70 2.29
1849 1953 0.888736 TCACCATGGTGCAACTTCCG 60.889 55.000 35.73 12.95 45.04 4.30
1869 1973 3.381590 CCGGTTGACATATGAGAGACAGA 59.618 47.826 10.38 0.00 0.00 3.41
1871 1975 4.367450 GGTTGACATATGAGAGACAGAGC 58.633 47.826 10.38 0.00 0.00 4.09
1916 2024 1.047801 AAACATGGGTGGGTGAAAGC 58.952 50.000 0.00 0.00 0.00 3.51
1941 2049 1.066152 TGACATCGCAGCTAGCTAGTG 59.934 52.381 18.86 17.52 42.61 2.74
2050 2158 7.384932 CCTCACTTAATTCCACAACCAAAAATC 59.615 37.037 0.00 0.00 0.00 2.17
2140 2252 6.370442 AGTTAATCGTTGCATGCAAGTAAGTA 59.630 34.615 32.64 19.91 36.52 2.24
2141 2253 4.864916 ATCGTTGCATGCAAGTAAGTAG 57.135 40.909 32.64 16.89 36.52 2.57
2142 2254 3.659786 TCGTTGCATGCAAGTAAGTAGT 58.340 40.909 32.64 0.00 36.52 2.73
2143 2255 4.811908 TCGTTGCATGCAAGTAAGTAGTA 58.188 39.130 32.64 5.22 36.52 1.82
2145 2257 5.347635 TCGTTGCATGCAAGTAAGTAGTAAG 59.652 40.000 32.64 10.55 36.52 2.34
2172 2284 0.459489 CAGAGGTGGAGTAGCTGAGC 59.541 60.000 0.00 0.00 37.23 4.26
2250 2362 0.473501 ACCCCACAATTTGCCATGGT 60.474 50.000 14.67 0.00 0.00 3.55
2287 2399 2.763448 ACCTAGAGCTGTCTCCATGAAC 59.237 50.000 0.00 0.00 40.22 3.18
2312 2424 2.231235 ACCGGCTAATTTGGCAAGAAAG 59.769 45.455 13.40 0.30 0.00 2.62
2327 2439 4.371786 CAAGAAAGCGATAGTGGAGCATA 58.628 43.478 0.00 0.00 39.35 3.14
2339 2451 9.862371 CGATAGTGGAGCATAGTATAATTTCTT 57.138 33.333 0.00 0.00 0.00 2.52
2376 2500 6.719370 TGTAAATTCCAGTCACCTAAATTGCT 59.281 34.615 0.00 0.00 0.00 3.91
2379 2503 4.365514 TCCAGTCACCTAAATTGCTCAA 57.634 40.909 0.00 0.00 0.00 3.02
2380 2504 4.724399 TCCAGTCACCTAAATTGCTCAAA 58.276 39.130 0.00 0.00 0.00 2.69
2381 2505 5.324409 TCCAGTCACCTAAATTGCTCAAAT 58.676 37.500 0.00 0.00 0.00 2.32
2382 2506 5.183713 TCCAGTCACCTAAATTGCTCAAATG 59.816 40.000 0.00 0.00 0.00 2.32
2383 2507 4.860907 CAGTCACCTAAATTGCTCAAATGC 59.139 41.667 0.00 0.00 0.00 3.56
2385 2509 4.622740 GTCACCTAAATTGCTCAAATGCAC 59.377 41.667 0.00 0.00 43.20 4.57
2386 2510 4.280425 TCACCTAAATTGCTCAAATGCACA 59.720 37.500 0.00 0.00 43.20 4.57
2387 2511 4.386652 CACCTAAATTGCTCAAATGCACAC 59.613 41.667 0.00 0.00 43.20 3.82
2388 2512 4.281688 ACCTAAATTGCTCAAATGCACACT 59.718 37.500 0.00 0.00 43.20 3.55
2389 2513 5.221501 ACCTAAATTGCTCAAATGCACACTT 60.222 36.000 0.00 0.00 43.20 3.16
2390 2514 6.015519 ACCTAAATTGCTCAAATGCACACTTA 60.016 34.615 0.00 0.00 43.20 2.24
2428 2552 9.158233 GTGAATTAGTGTAAGGTAGCATGTAAA 57.842 33.333 0.00 0.00 0.00 2.01
2463 2591 5.545723 TGGATGAATTTTGGTGGTGGTAAAT 59.454 36.000 0.00 0.00 0.00 1.40
2488 2616 8.795842 TTGGTAATAACTAAATTGACGTGGAT 57.204 30.769 0.00 0.00 0.00 3.41
2508 2636 0.893447 GTGGCAGGAGTTACTACCGT 59.107 55.000 0.00 0.00 0.00 4.83
2639 2767 1.418097 TTCCTCCAGCAGCAGACCAA 61.418 55.000 0.00 0.00 0.00 3.67
2763 2891 3.670377 GTGCCAACAACCTCGCCC 61.670 66.667 0.00 0.00 0.00 6.13
2883 3011 0.872021 CCAACTGCTCGCCGTATCTC 60.872 60.000 0.00 0.00 0.00 2.75
2901 3029 4.980805 TTCGACGGCGGCTTGCTT 62.981 61.111 12.58 0.00 45.43 3.91
3060 3188 4.148825 GCACCGATGTCCTCGCCT 62.149 66.667 0.00 0.00 46.25 5.52
3063 3191 1.682684 ACCGATGTCCTCGCCTTCT 60.683 57.895 0.00 0.00 46.25 2.85
3118 3246 2.532186 CCATACATCGACATGGCCG 58.468 57.895 9.01 0.00 35.60 6.13
3190 3318 2.620251 TGATCGATCGGGAGCAATTT 57.380 45.000 20.03 0.00 27.81 1.82
3207 3335 1.544724 TTTGGCTCCAGGAAAATCGG 58.455 50.000 0.00 0.00 0.00 4.18
3211 3339 2.507886 TGGCTCCAGGAAAATCGGATTA 59.492 45.455 3.22 0.00 0.00 1.75
3213 3341 3.753797 GGCTCCAGGAAAATCGGATTATC 59.246 47.826 3.22 0.00 0.00 1.75
3253 3385 3.104766 CAAGATGCGCGCAGGAAT 58.895 55.556 38.44 23.03 0.00 3.01
3266 3398 2.352651 CGCAGGAATGGTGTGTGATTAG 59.647 50.000 0.00 0.00 0.00 1.73
3275 3407 8.136165 GGAATGGTGTGTGATTAGTAGTAGTAG 58.864 40.741 0.00 0.00 0.00 2.57
3278 3410 8.728337 TGGTGTGTGATTAGTAGTAGTAGTAG 57.272 38.462 0.00 0.00 0.00 2.57
3279 3411 8.324306 TGGTGTGTGATTAGTAGTAGTAGTAGT 58.676 37.037 0.00 0.00 0.00 2.73
3280 3412 9.823647 GGTGTGTGATTAGTAGTAGTAGTAGTA 57.176 37.037 0.00 0.00 0.00 1.82
3357 3492 7.896383 TCCCAAAATAAGGAGGATTTGTATG 57.104 36.000 0.00 0.00 32.29 2.39
3358 3493 7.418378 TCCCAAAATAAGGAGGATTTGTATGT 58.582 34.615 0.00 0.00 32.29 2.29
3382 3517 7.973944 TGTGTGTTGTGTGAGTATAGTATGATC 59.026 37.037 0.00 0.00 0.00 2.92
3471 3608 1.958579 CATCCTTATGGTGTGCATGGG 59.041 52.381 0.00 0.00 34.23 4.00
3495 3651 5.464722 GTGGCAGATGTATATGTGAGTGAAG 59.535 44.000 0.45 0.00 29.42 3.02
3557 3713 5.373812 TTTTCAGTTGGACCTTTCTCTCT 57.626 39.130 0.00 0.00 0.00 3.10
3558 3714 4.608948 TTCAGTTGGACCTTTCTCTCTC 57.391 45.455 0.00 0.00 0.00 3.20
3559 3715 3.850752 TCAGTTGGACCTTTCTCTCTCT 58.149 45.455 0.00 0.00 0.00 3.10
3560 3716 3.576118 TCAGTTGGACCTTTCTCTCTCTG 59.424 47.826 0.00 0.00 0.00 3.35
3561 3717 3.323403 CAGTTGGACCTTTCTCTCTCTGT 59.677 47.826 0.00 0.00 0.00 3.41
3562 3718 3.970640 AGTTGGACCTTTCTCTCTCTGTT 59.029 43.478 0.00 0.00 0.00 3.16
3563 3719 4.410555 AGTTGGACCTTTCTCTCTCTGTTT 59.589 41.667 0.00 0.00 0.00 2.83
3564 3720 5.104318 AGTTGGACCTTTCTCTCTCTGTTTT 60.104 40.000 0.00 0.00 0.00 2.43
3565 3721 6.099845 AGTTGGACCTTTCTCTCTCTGTTTTA 59.900 38.462 0.00 0.00 0.00 1.52
3566 3722 5.855045 TGGACCTTTCTCTCTCTGTTTTAC 58.145 41.667 0.00 0.00 0.00 2.01
3567 3723 5.221661 TGGACCTTTCTCTCTCTGTTTTACC 60.222 44.000 0.00 0.00 0.00 2.85
3568 3724 5.012251 GGACCTTTCTCTCTCTGTTTTACCT 59.988 44.000 0.00 0.00 0.00 3.08
3569 3725 6.464607 GGACCTTTCTCTCTCTGTTTTACCTT 60.465 42.308 0.00 0.00 0.00 3.50
3570 3726 6.901300 ACCTTTCTCTCTCTGTTTTACCTTT 58.099 36.000 0.00 0.00 0.00 3.11
3571 3727 8.030913 ACCTTTCTCTCTCTGTTTTACCTTTA 57.969 34.615 0.00 0.00 0.00 1.85
3572 3728 7.932491 ACCTTTCTCTCTCTGTTTTACCTTTAC 59.068 37.037 0.00 0.00 0.00 2.01
3573 3729 7.931948 CCTTTCTCTCTCTGTTTTACCTTTACA 59.068 37.037 0.00 0.00 0.00 2.41
3574 3730 8.658499 TTTCTCTCTCTGTTTTACCTTTACAC 57.342 34.615 0.00 0.00 0.00 2.90
3575 3731 7.598759 TCTCTCTCTGTTTTACCTTTACACT 57.401 36.000 0.00 0.00 0.00 3.55
3576 3732 7.434492 TCTCTCTCTGTTTTACCTTTACACTG 58.566 38.462 0.00 0.00 0.00 3.66
3577 3733 6.522054 TCTCTCTGTTTTACCTTTACACTGG 58.478 40.000 0.00 0.00 0.00 4.00
3578 3734 6.325545 TCTCTCTGTTTTACCTTTACACTGGA 59.674 38.462 0.00 0.00 0.00 3.86
3579 3735 6.285990 TCTCTGTTTTACCTTTACACTGGAC 58.714 40.000 0.00 0.00 0.00 4.02
3580 3736 5.991861 TCTGTTTTACCTTTACACTGGACA 58.008 37.500 0.00 0.00 0.00 4.02
3581 3737 6.597562 TCTGTTTTACCTTTACACTGGACAT 58.402 36.000 0.00 0.00 0.00 3.06
3582 3738 7.737869 TCTGTTTTACCTTTACACTGGACATA 58.262 34.615 0.00 0.00 0.00 2.29
3583 3739 8.212312 TCTGTTTTACCTTTACACTGGACATAA 58.788 33.333 0.00 0.00 0.00 1.90
3584 3740 8.385898 TGTTTTACCTTTACACTGGACATAAG 57.614 34.615 0.00 0.00 0.00 1.73
3585 3741 7.994334 TGTTTTACCTTTACACTGGACATAAGT 59.006 33.333 0.00 0.00 0.00 2.24
3586 3742 8.843262 GTTTTACCTTTACACTGGACATAAGTT 58.157 33.333 0.00 0.00 0.00 2.66
3587 3743 8.983702 TTTACCTTTACACTGGACATAAGTTT 57.016 30.769 0.00 0.00 0.00 2.66
3588 3744 8.611654 TTACCTTTACACTGGACATAAGTTTC 57.388 34.615 0.00 0.00 0.00 2.78
3589 3745 6.838382 ACCTTTACACTGGACATAAGTTTCT 58.162 36.000 0.00 0.00 0.00 2.52
3590 3746 7.287810 ACCTTTACACTGGACATAAGTTTCTT 58.712 34.615 0.00 0.00 0.00 2.52
3591 3747 7.444487 ACCTTTACACTGGACATAAGTTTCTTC 59.556 37.037 0.00 0.00 0.00 2.87
3592 3748 7.661847 CCTTTACACTGGACATAAGTTTCTTCT 59.338 37.037 0.00 0.00 0.00 2.85
3593 3749 8.603242 TTTACACTGGACATAAGTTTCTTCTC 57.397 34.615 0.00 0.00 0.00 2.87
3594 3750 6.426646 ACACTGGACATAAGTTTCTTCTCT 57.573 37.500 0.00 0.00 0.00 3.10
3595 3751 6.831976 ACACTGGACATAAGTTTCTTCTCTT 58.168 36.000 0.00 0.00 0.00 2.85
3596 3752 6.931840 ACACTGGACATAAGTTTCTTCTCTTC 59.068 38.462 0.00 0.00 0.00 2.87
3597 3753 6.931281 CACTGGACATAAGTTTCTTCTCTTCA 59.069 38.462 0.00 0.00 0.00 3.02
3598 3754 7.117523 CACTGGACATAAGTTTCTTCTCTTCAG 59.882 40.741 0.00 0.00 0.00 3.02
3599 3755 6.467677 TGGACATAAGTTTCTTCTCTTCAGG 58.532 40.000 0.00 0.00 0.00 3.86
3600 3756 5.877564 GGACATAAGTTTCTTCTCTTCAGGG 59.122 44.000 0.00 0.00 0.00 4.45
3601 3757 5.810095 ACATAAGTTTCTTCTCTTCAGGGG 58.190 41.667 0.00 0.00 0.00 4.79
3602 3758 2.869101 AGTTTCTTCTCTTCAGGGGC 57.131 50.000 0.00 0.00 0.00 5.80
3603 3759 2.057922 AGTTTCTTCTCTTCAGGGGCA 58.942 47.619 0.00 0.00 0.00 5.36
3604 3760 2.155279 GTTTCTTCTCTTCAGGGGCAC 58.845 52.381 0.00 0.00 0.00 5.01
3605 3761 1.734655 TTCTTCTCTTCAGGGGCACT 58.265 50.000 0.00 0.00 0.00 4.40
3614 3770 3.551259 CAGGGGCACTGTTAATCGT 57.449 52.632 9.07 0.00 42.42 3.73
3615 3771 1.086696 CAGGGGCACTGTTAATCGTG 58.913 55.000 9.07 3.50 42.42 4.35
3616 3772 0.690762 AGGGGCACTGTTAATCGTGT 59.309 50.000 0.00 0.00 33.78 4.49
3617 3773 1.073284 AGGGGCACTGTTAATCGTGTT 59.927 47.619 0.00 0.00 33.78 3.32
3618 3774 1.199097 GGGGCACTGTTAATCGTGTTG 59.801 52.381 8.34 0.00 33.78 3.33
3619 3775 1.877443 GGGCACTGTTAATCGTGTTGT 59.123 47.619 8.34 0.00 33.78 3.32
3620 3776 2.292292 GGGCACTGTTAATCGTGTTGTT 59.708 45.455 8.34 0.00 33.78 2.83
3621 3777 3.551551 GGCACTGTTAATCGTGTTGTTC 58.448 45.455 8.34 0.00 33.78 3.18
3622 3778 3.002862 GGCACTGTTAATCGTGTTGTTCA 59.997 43.478 8.34 0.00 33.78 3.18
3623 3779 4.211389 GCACTGTTAATCGTGTTGTTCAG 58.789 43.478 8.34 0.00 33.78 3.02
3624 3780 4.260620 GCACTGTTAATCGTGTTGTTCAGT 60.261 41.667 8.34 0.00 35.69 3.41
3625 3781 5.729454 GCACTGTTAATCGTGTTGTTCAGTT 60.729 40.000 8.34 0.00 33.54 3.16
3626 3782 6.510478 GCACTGTTAATCGTGTTGTTCAGTTA 60.510 38.462 8.34 0.00 33.54 2.24
3627 3783 7.572759 CACTGTTAATCGTGTTGTTCAGTTAT 58.427 34.615 0.00 0.00 33.54 1.89
3628 3784 8.067784 CACTGTTAATCGTGTTGTTCAGTTATT 58.932 33.333 0.00 0.00 33.54 1.40
3629 3785 8.280497 ACTGTTAATCGTGTTGTTCAGTTATTC 58.720 33.333 0.00 0.00 32.15 1.75
3630 3786 8.373048 TGTTAATCGTGTTGTTCAGTTATTCT 57.627 30.769 0.00 0.00 0.00 2.40
3631 3787 8.832521 TGTTAATCGTGTTGTTCAGTTATTCTT 58.167 29.630 0.00 0.00 0.00 2.52
3632 3788 9.103048 GTTAATCGTGTTGTTCAGTTATTCTTG 57.897 33.333 0.00 0.00 0.00 3.02
3633 3789 7.490962 AATCGTGTTGTTCAGTTATTCTTGA 57.509 32.000 0.00 0.00 0.00 3.02
3634 3790 6.912203 TCGTGTTGTTCAGTTATTCTTGAA 57.088 33.333 0.00 0.00 0.00 2.69
3635 3791 7.490962 TCGTGTTGTTCAGTTATTCTTGAAT 57.509 32.000 1.35 1.35 0.00 2.57
3636 3792 7.351981 TCGTGTTGTTCAGTTATTCTTGAATG 58.648 34.615 6.15 0.00 0.00 2.67
3637 3793 7.225734 TCGTGTTGTTCAGTTATTCTTGAATGA 59.774 33.333 6.15 0.00 0.00 2.57
3638 3794 7.855409 CGTGTTGTTCAGTTATTCTTGAATGAA 59.145 33.333 6.15 0.60 0.00 2.57
3639 3795 9.515020 GTGTTGTTCAGTTATTCTTGAATGAAA 57.485 29.630 6.15 0.00 0.00 2.69
3700 3856 8.455903 TGATAAAAGAATGCTTTCCTAGATGG 57.544 34.615 0.00 0.00 43.32 3.51
3701 3857 8.055181 TGATAAAAGAATGCTTTCCTAGATGGT 58.945 33.333 0.00 0.00 43.32 3.55
3702 3858 9.561069 GATAAAAGAATGCTTTCCTAGATGGTA 57.439 33.333 0.00 0.00 43.32 3.25
3703 3859 7.631717 AAAAGAATGCTTTCCTAGATGGTAC 57.368 36.000 0.00 0.00 43.32 3.34
3704 3860 5.297569 AGAATGCTTTCCTAGATGGTACC 57.702 43.478 4.43 4.43 37.07 3.34
3705 3861 4.721776 AGAATGCTTTCCTAGATGGTACCA 59.278 41.667 18.99 18.99 37.07 3.25
3706 3862 5.370880 AGAATGCTTTCCTAGATGGTACCAT 59.629 40.000 27.70 27.70 34.27 3.55
3707 3863 4.422073 TGCTTTCCTAGATGGTACCATG 57.578 45.455 32.07 17.10 36.70 3.66
3708 3864 3.142174 GCTTTCCTAGATGGTACCATGC 58.858 50.000 32.07 20.93 36.70 4.06
3709 3865 3.181450 GCTTTCCTAGATGGTACCATGCT 60.181 47.826 32.07 26.10 36.70 3.79
3710 3866 4.636249 CTTTCCTAGATGGTACCATGCTC 58.364 47.826 32.07 18.46 36.70 4.26
3711 3867 2.239400 TCCTAGATGGTACCATGCTCG 58.761 52.381 32.07 20.80 36.70 5.03
3712 3868 2.158519 TCCTAGATGGTACCATGCTCGA 60.159 50.000 32.07 20.30 36.70 4.04
3713 3869 2.828520 CCTAGATGGTACCATGCTCGAT 59.171 50.000 32.07 6.90 36.70 3.59
3714 3870 4.017126 CCTAGATGGTACCATGCTCGATA 58.983 47.826 32.07 12.71 36.70 2.92
3715 3871 4.646945 CCTAGATGGTACCATGCTCGATAT 59.353 45.833 32.07 5.20 36.70 1.63
3716 3872 5.127845 CCTAGATGGTACCATGCTCGATATT 59.872 44.000 32.07 4.35 36.70 1.28
3717 3873 4.825422 AGATGGTACCATGCTCGATATTG 58.175 43.478 32.07 0.00 36.70 1.90
3718 3874 4.284490 AGATGGTACCATGCTCGATATTGT 59.716 41.667 32.07 3.52 36.70 2.71
3719 3875 4.415881 TGGTACCATGCTCGATATTGTT 57.584 40.909 11.60 0.00 0.00 2.83
3720 3876 4.377021 TGGTACCATGCTCGATATTGTTC 58.623 43.478 11.60 0.00 0.00 3.18
3721 3877 4.100963 TGGTACCATGCTCGATATTGTTCT 59.899 41.667 11.60 0.00 0.00 3.01
3722 3878 5.057149 GGTACCATGCTCGATATTGTTCTT 58.943 41.667 7.15 0.00 0.00 2.52
3723 3879 5.177696 GGTACCATGCTCGATATTGTTCTTC 59.822 44.000 7.15 0.00 0.00 2.87
3724 3880 5.028549 ACCATGCTCGATATTGTTCTTCT 57.971 39.130 0.00 0.00 0.00 2.85
3725 3881 5.431765 ACCATGCTCGATATTGTTCTTCTT 58.568 37.500 0.00 0.00 0.00 2.52
3726 3882 5.882557 ACCATGCTCGATATTGTTCTTCTTT 59.117 36.000 0.00 0.00 0.00 2.52
3727 3883 6.375455 ACCATGCTCGATATTGTTCTTCTTTT 59.625 34.615 0.00 0.00 0.00 2.27
3728 3884 6.909357 CCATGCTCGATATTGTTCTTCTTTTC 59.091 38.462 0.00 0.00 0.00 2.29
3729 3885 7.414429 CCATGCTCGATATTGTTCTTCTTTTCA 60.414 37.037 0.00 0.00 0.00 2.69
3730 3886 7.065216 TGCTCGATATTGTTCTTCTTTTCAG 57.935 36.000 0.00 0.00 0.00 3.02
3731 3887 6.650807 TGCTCGATATTGTTCTTCTTTTCAGT 59.349 34.615 0.00 0.00 0.00 3.41
3732 3888 6.958193 GCTCGATATTGTTCTTCTTTTCAGTG 59.042 38.462 0.00 0.00 0.00 3.66
3733 3889 7.148573 GCTCGATATTGTTCTTCTTTTCAGTGA 60.149 37.037 0.00 0.00 0.00 3.41
3734 3890 8.601845 TCGATATTGTTCTTCTTTTCAGTGAA 57.398 30.769 0.08 0.08 0.00 3.18
3735 3891 8.712363 TCGATATTGTTCTTCTTTTCAGTGAAG 58.288 33.333 5.56 0.00 40.53 3.02
3736 3892 8.712363 CGATATTGTTCTTCTTTTCAGTGAAGA 58.288 33.333 5.56 0.30 44.51 2.87
3738 3894 9.784531 ATATTGTTCTTCTTTTCAGTGAAGAGA 57.215 29.630 19.36 19.36 46.01 3.10
3739 3895 7.921786 TTGTTCTTCTTTTCAGTGAAGAGAA 57.078 32.000 27.82 27.82 46.01 2.87
3744 3900 5.282055 TCTTTTCAGTGAAGAGAAGAGCA 57.718 39.130 20.60 0.70 34.84 4.26
3745 3901 5.053145 TCTTTTCAGTGAAGAGAAGAGCAC 58.947 41.667 20.60 0.00 34.84 4.40
3746 3902 4.406648 TTTCAGTGAAGAGAAGAGCACA 57.593 40.909 5.56 0.00 33.85 4.57
3747 3903 4.406648 TTCAGTGAAGAGAAGAGCACAA 57.593 40.909 0.08 0.00 33.85 3.33
3748 3904 4.613925 TCAGTGAAGAGAAGAGCACAAT 57.386 40.909 0.00 0.00 33.85 2.71
3749 3905 4.965814 TCAGTGAAGAGAAGAGCACAATT 58.034 39.130 0.00 0.00 33.85 2.32
3750 3906 4.753610 TCAGTGAAGAGAAGAGCACAATTG 59.246 41.667 3.24 3.24 33.85 2.32
3751 3907 4.753610 CAGTGAAGAGAAGAGCACAATTGA 59.246 41.667 13.59 0.00 33.85 2.57
3752 3908 4.996122 AGTGAAGAGAAGAGCACAATTGAG 59.004 41.667 13.59 5.31 33.85 3.02
3753 3909 4.993584 GTGAAGAGAAGAGCACAATTGAGA 59.006 41.667 13.59 0.00 0.00 3.27
3754 3910 5.642919 GTGAAGAGAAGAGCACAATTGAGAT 59.357 40.000 13.59 1.99 0.00 2.75
3755 3911 6.815641 GTGAAGAGAAGAGCACAATTGAGATA 59.184 38.462 13.59 0.00 0.00 1.98
3756 3912 7.332926 GTGAAGAGAAGAGCACAATTGAGATAA 59.667 37.037 13.59 0.00 0.00 1.75
3757 3913 7.332926 TGAAGAGAAGAGCACAATTGAGATAAC 59.667 37.037 13.59 0.00 0.00 1.89
3758 3914 6.705302 AGAGAAGAGCACAATTGAGATAACA 58.295 36.000 13.59 0.00 0.00 2.41
3759 3915 6.817641 AGAGAAGAGCACAATTGAGATAACAG 59.182 38.462 13.59 0.00 0.00 3.16
3760 3916 5.353678 AGAAGAGCACAATTGAGATAACAGC 59.646 40.000 13.59 3.09 0.00 4.40
3761 3917 3.620374 AGAGCACAATTGAGATAACAGCG 59.380 43.478 13.59 0.00 0.00 5.18
3762 3918 2.679837 AGCACAATTGAGATAACAGCGG 59.320 45.455 13.59 0.00 0.00 5.52
3763 3919 2.420022 GCACAATTGAGATAACAGCGGT 59.580 45.455 13.59 0.00 0.00 5.68
3764 3920 3.728864 GCACAATTGAGATAACAGCGGTG 60.729 47.826 13.59 14.13 0.00 4.94
3765 3921 3.436704 CACAATTGAGATAACAGCGGTGT 59.563 43.478 15.81 15.81 39.19 4.16
3766 3922 3.436704 ACAATTGAGATAACAGCGGTGTG 59.563 43.478 22.63 7.00 36.84 3.82
3767 3923 1.438651 TTGAGATAACAGCGGTGTGC 58.561 50.000 22.63 13.66 46.98 4.57
3785 3941 2.284263 GCTTTGGGCATTGAGTTAGC 57.716 50.000 0.00 0.00 41.35 3.09
3786 3942 1.468054 GCTTTGGGCATTGAGTTAGCG 60.468 52.381 0.00 0.00 41.35 4.26
3787 3943 1.812571 CTTTGGGCATTGAGTTAGCGT 59.187 47.619 0.00 0.00 0.00 5.07
3788 3944 1.448985 TTGGGCATTGAGTTAGCGTC 58.551 50.000 0.00 0.00 0.00 5.19
3789 3945 0.323302 TGGGCATTGAGTTAGCGTCA 59.677 50.000 0.00 0.00 0.00 4.35
3790 3946 1.271108 TGGGCATTGAGTTAGCGTCAA 60.271 47.619 0.00 0.00 38.28 3.18
3791 3947 2.017049 GGGCATTGAGTTAGCGTCAAT 58.983 47.619 0.00 0.00 43.90 2.57
3792 3948 3.202906 GGGCATTGAGTTAGCGTCAATA 58.797 45.455 6.39 0.00 41.69 1.90
3793 3949 3.625764 GGGCATTGAGTTAGCGTCAATAA 59.374 43.478 6.39 0.00 41.69 1.40
3794 3950 4.495844 GGGCATTGAGTTAGCGTCAATAAC 60.496 45.833 6.39 0.00 41.69 1.89
3795 3951 4.094294 GGCATTGAGTTAGCGTCAATAACA 59.906 41.667 6.39 0.00 41.69 2.41
3796 3952 5.258622 GCATTGAGTTAGCGTCAATAACAG 58.741 41.667 6.39 0.00 41.69 3.16
3797 3953 4.921470 TTGAGTTAGCGTCAATAACAGC 57.079 40.909 0.00 0.00 35.92 4.40
3798 3954 3.259064 TGAGTTAGCGTCAATAACAGCC 58.741 45.455 0.00 0.00 35.92 4.85
3799 3955 3.259064 GAGTTAGCGTCAATAACAGCCA 58.741 45.455 0.00 0.00 35.92 4.75
3800 3956 3.670625 AGTTAGCGTCAATAACAGCCAA 58.329 40.909 0.00 0.00 35.92 4.52
3801 3957 3.684788 AGTTAGCGTCAATAACAGCCAAG 59.315 43.478 0.00 0.00 35.92 3.61
3802 3958 2.472695 AGCGTCAATAACAGCCAAGA 57.527 45.000 0.00 0.00 0.00 3.02
3803 3959 2.778299 AGCGTCAATAACAGCCAAGAA 58.222 42.857 0.00 0.00 0.00 2.52
3804 3960 2.744202 AGCGTCAATAACAGCCAAGAAG 59.256 45.455 0.00 0.00 0.00 2.85
3805 3961 2.484264 GCGTCAATAACAGCCAAGAAGT 59.516 45.455 0.00 0.00 0.00 3.01
3806 3962 3.667960 GCGTCAATAACAGCCAAGAAGTG 60.668 47.826 0.00 0.00 0.00 3.16
3807 3963 3.498397 CGTCAATAACAGCCAAGAAGTGT 59.502 43.478 0.00 0.00 0.00 3.55
3808 3964 4.024048 CGTCAATAACAGCCAAGAAGTGTT 60.024 41.667 0.00 0.00 38.04 3.32
3809 3965 5.178623 CGTCAATAACAGCCAAGAAGTGTTA 59.821 40.000 0.00 0.00 40.11 2.41
3810 3966 6.293190 CGTCAATAACAGCCAAGAAGTGTTAA 60.293 38.462 0.00 0.00 39.46 2.01
3811 3967 7.573096 CGTCAATAACAGCCAAGAAGTGTTAAT 60.573 37.037 0.00 0.00 39.46 1.40
3812 3968 7.538678 GTCAATAACAGCCAAGAAGTGTTAATG 59.461 37.037 0.00 0.00 39.46 1.90
3813 3969 4.853924 AACAGCCAAGAAGTGTTAATGG 57.146 40.909 0.00 0.00 32.63 3.16
3818 3974 3.578688 CCAAGAAGTGTTAATGGCTTGC 58.421 45.455 0.00 0.00 33.33 4.01
3819 3975 3.005684 CCAAGAAGTGTTAATGGCTTGCA 59.994 43.478 0.00 0.00 33.33 4.08
3820 3976 4.322198 CCAAGAAGTGTTAATGGCTTGCAT 60.322 41.667 0.00 0.00 33.33 3.96
3821 3977 4.445452 AGAAGTGTTAATGGCTTGCATG 57.555 40.909 0.00 0.00 0.00 4.06
3822 3978 3.828451 AGAAGTGTTAATGGCTTGCATGT 59.172 39.130 1.14 0.00 0.00 3.21
3823 3979 4.281688 AGAAGTGTTAATGGCTTGCATGTT 59.718 37.500 1.14 0.00 0.00 2.71
3824 3980 3.916761 AGTGTTAATGGCTTGCATGTTG 58.083 40.909 1.14 0.00 0.00 3.33
3825 3981 3.573538 AGTGTTAATGGCTTGCATGTTGA 59.426 39.130 1.14 0.00 0.00 3.18
3826 3982 4.221262 AGTGTTAATGGCTTGCATGTTGAT 59.779 37.500 1.14 0.00 0.00 2.57
3827 3983 4.327898 GTGTTAATGGCTTGCATGTTGATG 59.672 41.667 1.14 0.00 0.00 3.07
3828 3984 4.021280 TGTTAATGGCTTGCATGTTGATGT 60.021 37.500 1.14 0.00 31.50 3.06
3829 3985 3.688694 AATGGCTTGCATGTTGATGTT 57.311 38.095 1.14 0.00 31.50 2.71
3830 3986 2.442212 TGGCTTGCATGTTGATGTTG 57.558 45.000 1.14 0.00 31.50 3.33
3831 3987 1.687660 TGGCTTGCATGTTGATGTTGT 59.312 42.857 1.14 0.00 31.50 3.32
3832 3988 2.063266 GGCTTGCATGTTGATGTTGTG 58.937 47.619 1.14 0.00 31.50 3.33
3833 3989 2.546373 GGCTTGCATGTTGATGTTGTGT 60.546 45.455 1.14 0.00 31.50 3.72
3834 3990 2.727798 GCTTGCATGTTGATGTTGTGTC 59.272 45.455 1.14 0.00 31.50 3.67
3835 3991 3.311106 CTTGCATGTTGATGTTGTGTCC 58.689 45.455 0.00 0.00 31.50 4.02
3836 3992 1.612950 TGCATGTTGATGTTGTGTCCC 59.387 47.619 0.00 0.00 31.50 4.46
3837 3993 1.612950 GCATGTTGATGTTGTGTCCCA 59.387 47.619 0.00 0.00 31.50 4.37
3838 3994 2.231964 GCATGTTGATGTTGTGTCCCAT 59.768 45.455 0.00 0.00 31.50 4.00
3839 3995 3.306225 GCATGTTGATGTTGTGTCCCATT 60.306 43.478 0.00 0.00 31.50 3.16
3840 3996 4.082300 GCATGTTGATGTTGTGTCCCATTA 60.082 41.667 0.00 0.00 31.50 1.90
3841 3997 5.643664 CATGTTGATGTTGTGTCCCATTAG 58.356 41.667 0.00 0.00 0.00 1.73
3842 3998 3.505680 TGTTGATGTTGTGTCCCATTAGC 59.494 43.478 0.00 0.00 0.00 3.09
3843 3999 3.431673 TGATGTTGTGTCCCATTAGCA 57.568 42.857 0.00 0.00 0.00 3.49
3844 4000 3.346315 TGATGTTGTGTCCCATTAGCAG 58.654 45.455 0.00 0.00 0.00 4.24
3845 4001 3.008923 TGATGTTGTGTCCCATTAGCAGA 59.991 43.478 0.00 0.00 0.00 4.26
3846 4002 3.719268 TGTTGTGTCCCATTAGCAGAT 57.281 42.857 0.00 0.00 0.00 2.90
3847 4003 4.835284 TGTTGTGTCCCATTAGCAGATA 57.165 40.909 0.00 0.00 0.00 1.98
3848 4004 5.372343 TGTTGTGTCCCATTAGCAGATAT 57.628 39.130 0.00 0.00 0.00 1.63
3849 4005 5.754782 TGTTGTGTCCCATTAGCAGATATT 58.245 37.500 0.00 0.00 0.00 1.28
3850 4006 6.186957 TGTTGTGTCCCATTAGCAGATATTT 58.813 36.000 0.00 0.00 0.00 1.40
3851 4007 6.663093 TGTTGTGTCCCATTAGCAGATATTTT 59.337 34.615 0.00 0.00 0.00 1.82
3852 4008 7.178274 TGTTGTGTCCCATTAGCAGATATTTTT 59.822 33.333 0.00 0.00 0.00 1.94
3853 4009 8.682710 GTTGTGTCCCATTAGCAGATATTTTTA 58.317 33.333 0.00 0.00 0.00 1.52
3854 4010 8.995027 TGTGTCCCATTAGCAGATATTTTTAT 57.005 30.769 0.00 0.00 0.00 1.40
3855 4011 9.066892 TGTGTCCCATTAGCAGATATTTTTATC 57.933 33.333 0.00 0.00 0.00 1.75
3856 4012 8.515414 GTGTCCCATTAGCAGATATTTTTATCC 58.485 37.037 0.00 0.00 0.00 2.59
3857 4013 8.448008 TGTCCCATTAGCAGATATTTTTATCCT 58.552 33.333 0.00 0.00 0.00 3.24
3858 4014 9.301897 GTCCCATTAGCAGATATTTTTATCCTT 57.698 33.333 0.00 0.00 0.00 3.36
3859 4015 9.881773 TCCCATTAGCAGATATTTTTATCCTTT 57.118 29.630 0.00 0.00 0.00 3.11
4013 4169 9.730420 ATACATGCGATTTAATAAAAAGTCCAC 57.270 29.630 0.00 0.00 0.00 4.02
4014 4170 7.033185 ACATGCGATTTAATAAAAAGTCCACC 58.967 34.615 0.00 0.00 0.00 4.61
4015 4171 6.827586 TGCGATTTAATAAAAAGTCCACCT 57.172 33.333 0.00 0.00 0.00 4.00
4016 4172 7.925043 TGCGATTTAATAAAAAGTCCACCTA 57.075 32.000 0.00 0.00 0.00 3.08
4017 4173 8.514330 TGCGATTTAATAAAAAGTCCACCTAT 57.486 30.769 0.00 0.00 0.00 2.57
4018 4174 8.962679 TGCGATTTAATAAAAAGTCCACCTATT 58.037 29.630 0.00 0.00 0.00 1.73
4019 4175 9.797556 GCGATTTAATAAAAAGTCCACCTATTT 57.202 29.630 0.00 0.00 0.00 1.40
4101 4257 9.802039 ATATAGTTCTAAAAAGTGTCCAAACCA 57.198 29.630 0.00 0.00 0.00 3.67
4102 4258 8.706322 ATAGTTCTAAAAAGTGTCCAAACCAT 57.294 30.769 0.00 0.00 0.00 3.55
4103 4259 9.802039 ATAGTTCTAAAAAGTGTCCAAACCATA 57.198 29.630 0.00 0.00 0.00 2.74
4104 4260 8.706322 AGTTCTAAAAAGTGTCCAAACCATAT 57.294 30.769 0.00 0.00 0.00 1.78
4105 4261 9.802039 AGTTCTAAAAAGTGTCCAAACCATATA 57.198 29.630 0.00 0.00 0.00 0.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
43 44 3.854784 GCAAAGCACAAAAGTGAGGCTAG 60.855 47.826 0.00 0.00 37.74 3.42
194 207 1.327690 ACTGCCCCATCGTGTCGTAT 61.328 55.000 0.00 0.00 0.00 3.06
195 208 1.940883 GACTGCCCCATCGTGTCGTA 61.941 60.000 0.00 0.00 0.00 3.43
346 426 9.524496 ACATATGATTGAACCAGTGCATATATT 57.476 29.630 10.38 0.00 30.33 1.28
414 494 3.064271 TCAAACCAACTGACGCAAAGTAC 59.936 43.478 0.00 0.00 0.00 2.73
422 502 2.766313 TGAGGATCAAACCAACTGACG 58.234 47.619 0.00 0.00 45.97 4.35
434 514 6.320926 TGTTGACAAAGAACAATTGAGGATCA 59.679 34.615 13.59 3.73 35.04 2.92
496 576 0.871722 GGCACGCACACTCACATTAA 59.128 50.000 0.00 0.00 0.00 1.40
497 577 0.953471 GGGCACGCACACTCACATTA 60.953 55.000 0.00 0.00 0.00 1.90
499 579 1.826340 TAGGGCACGCACACTCACAT 61.826 55.000 0.00 0.00 0.00 3.21
510 590 2.421775 TGCATGTTTATGTTAGGGCACG 59.578 45.455 0.00 0.00 36.65 5.34
532 612 0.111061 GGAGATATGCCCACCATGCA 59.889 55.000 0.00 0.00 43.97 3.96
716 803 2.038033 TGGTAACTACTCCAGTGTTGGC 59.962 50.000 0.00 0.00 40.47 4.52
724 811 3.305720 CCTGGCTATGGTAACTACTCCA 58.694 50.000 0.00 0.00 38.14 3.86
788 876 1.134098 AGAAATGACCAGTATGCCCCG 60.134 52.381 0.00 0.00 31.97 5.73
984 1072 1.246056 CCATGGACAACACCTGGCTG 61.246 60.000 5.56 0.00 31.36 4.85
1110 1198 3.524606 ATTGCTGCTGGCGATGGC 61.525 61.111 0.00 0.00 42.98 4.40
1179 1273 2.711922 CCCTTCCTCCTCGTCACCG 61.712 68.421 0.00 0.00 0.00 4.94
1223 1317 1.148310 CGTCGACATGAGCCTGTTTT 58.852 50.000 17.16 0.00 0.00 2.43
1224 1318 0.670546 CCGTCGACATGAGCCTGTTT 60.671 55.000 17.16 0.00 0.00 2.83
1370 1464 5.835113 ATGGTTGTTGTTGGCATAGATAC 57.165 39.130 0.00 0.00 0.00 2.24
1383 1477 6.677781 ACGGAGAATTGTATATGGTTGTTG 57.322 37.500 0.00 0.00 0.00 3.33
1393 1487 4.752101 GCTTGCATCTACGGAGAATTGTAT 59.248 41.667 0.00 0.00 34.61 2.29
1441 1539 1.302192 CCGGCGAGAAAACCCTGAA 60.302 57.895 9.30 0.00 0.00 3.02
1593 1691 7.662669 TGGGGTGAAACTGTAAAGAAATAGTAC 59.337 37.037 0.00 0.00 36.74 2.73
1596 1694 7.703058 ATGGGGTGAAACTGTAAAGAAATAG 57.297 36.000 0.00 0.00 36.74 1.73
1597 1695 9.403583 GATATGGGGTGAAACTGTAAAGAAATA 57.596 33.333 0.00 0.00 36.74 1.40
1598 1696 7.893302 TGATATGGGGTGAAACTGTAAAGAAAT 59.107 33.333 0.00 0.00 36.74 2.17
1599 1697 7.235079 TGATATGGGGTGAAACTGTAAAGAAA 58.765 34.615 0.00 0.00 36.74 2.52
1600 1698 6.785076 TGATATGGGGTGAAACTGTAAAGAA 58.215 36.000 0.00 0.00 36.74 2.52
1601 1699 6.381498 TGATATGGGGTGAAACTGTAAAGA 57.619 37.500 0.00 0.00 36.74 2.52
1602 1700 6.127730 GGTTGATATGGGGTGAAACTGTAAAG 60.128 42.308 0.00 0.00 36.74 1.85
1618 1722 4.458295 GGCCATGAGAGATTGGTTGATATG 59.542 45.833 0.00 0.00 35.34 1.78
1628 1732 3.389329 AGTTATGTCGGCCATGAGAGATT 59.611 43.478 2.24 0.00 34.86 2.40
1647 1751 6.940867 GGAGGGAGTACAAGTGATTAAAAGTT 59.059 38.462 0.00 0.00 0.00 2.66
1657 1761 1.402456 CGAACGGAGGGAGTACAAGTG 60.402 57.143 0.00 0.00 0.00 3.16
1662 1766 1.109609 ATTCCGAACGGAGGGAGTAC 58.890 55.000 15.34 0.00 46.06 2.73
1663 1767 1.856629 AATTCCGAACGGAGGGAGTA 58.143 50.000 15.34 1.05 46.06 2.59
1664 1768 1.479730 GTAATTCCGAACGGAGGGAGT 59.520 52.381 15.34 4.12 46.06 3.85
1665 1769 1.755380 AGTAATTCCGAACGGAGGGAG 59.245 52.381 15.34 0.00 46.06 4.30
1666 1770 1.856629 AGTAATTCCGAACGGAGGGA 58.143 50.000 15.34 2.49 46.06 4.20
1667 1771 2.277084 CAAGTAATTCCGAACGGAGGG 58.723 52.381 15.34 0.00 46.06 4.30
1668 1772 2.928116 GACAAGTAATTCCGAACGGAGG 59.072 50.000 15.34 4.52 46.06 4.30
1669 1773 3.846360 AGACAAGTAATTCCGAACGGAG 58.154 45.455 15.34 5.60 46.06 4.63
1670 1774 3.671433 CGAGACAAGTAATTCCGAACGGA 60.671 47.826 12.04 12.04 43.52 4.69
1671 1775 2.597305 CGAGACAAGTAATTCCGAACGG 59.403 50.000 6.94 6.94 0.00 4.44
1672 1776 3.495193 TCGAGACAAGTAATTCCGAACG 58.505 45.455 0.00 0.00 0.00 3.95
1673 1777 4.730657 TCTCGAGACAAGTAATTCCGAAC 58.269 43.478 12.08 0.00 0.00 3.95
1674 1778 5.381174 TTCTCGAGACAAGTAATTCCGAA 57.619 39.130 16.36 0.00 0.00 4.30
1675 1779 5.340803 CATTCTCGAGACAAGTAATTCCGA 58.659 41.667 16.36 0.00 0.00 4.55
1676 1780 4.504461 CCATTCTCGAGACAAGTAATTCCG 59.496 45.833 16.36 0.00 0.00 4.30
1677 1781 5.661458 TCCATTCTCGAGACAAGTAATTCC 58.339 41.667 16.36 0.00 0.00 3.01
1678 1782 6.758886 ACATCCATTCTCGAGACAAGTAATTC 59.241 38.462 16.36 0.00 0.00 2.17
1679 1783 6.644347 ACATCCATTCTCGAGACAAGTAATT 58.356 36.000 16.36 0.00 0.00 1.40
1680 1784 6.227298 ACATCCATTCTCGAGACAAGTAAT 57.773 37.500 16.36 1.38 0.00 1.89
1681 1785 5.661056 ACATCCATTCTCGAGACAAGTAA 57.339 39.130 16.36 0.00 0.00 2.24
1682 1786 6.773200 AGATACATCCATTCTCGAGACAAGTA 59.227 38.462 16.36 12.24 0.00 2.24
1683 1787 5.596361 AGATACATCCATTCTCGAGACAAGT 59.404 40.000 16.36 10.48 0.00 3.16
1684 1788 6.083098 AGATACATCCATTCTCGAGACAAG 57.917 41.667 16.36 7.79 0.00 3.16
1685 1789 6.998673 TCTAGATACATCCATTCTCGAGACAA 59.001 38.462 16.36 1.01 0.00 3.18
1686 1790 6.534634 TCTAGATACATCCATTCTCGAGACA 58.465 40.000 16.36 7.20 0.00 3.41
1687 1791 7.174253 AGTTCTAGATACATCCATTCTCGAGAC 59.826 40.741 16.36 0.00 0.00 3.36
1688 1792 7.227873 AGTTCTAGATACATCCATTCTCGAGA 58.772 38.462 12.08 12.08 0.00 4.04
1689 1793 7.447374 AGTTCTAGATACATCCATTCTCGAG 57.553 40.000 5.93 5.93 0.00 4.04
1690 1794 8.919777 TTAGTTCTAGATACATCCATTCTCGA 57.080 34.615 0.00 0.00 0.00 4.04
1691 1795 9.967346 TTTTAGTTCTAGATACATCCATTCTCG 57.033 33.333 0.00 0.00 0.00 4.04
1728 1832 9.982291 GAATTACTTGTCGCAAAAATAGATGTA 57.018 29.630 0.00 0.00 0.00 2.29
1729 1833 7.968405 GGAATTACTTGTCGCAAAAATAGATGT 59.032 33.333 0.00 0.00 0.00 3.06
1730 1834 7.164171 CGGAATTACTTGTCGCAAAAATAGATG 59.836 37.037 0.00 0.00 0.00 2.90
1731 1835 7.065324 TCGGAATTACTTGTCGCAAAAATAGAT 59.935 33.333 0.00 0.00 0.00 1.98
1732 1836 6.369340 TCGGAATTACTTGTCGCAAAAATAGA 59.631 34.615 0.00 0.00 0.00 1.98
1733 1837 6.539324 TCGGAATTACTTGTCGCAAAAATAG 58.461 36.000 0.00 0.00 0.00 1.73
1734 1838 6.483385 TCGGAATTACTTGTCGCAAAAATA 57.517 33.333 0.00 0.00 0.00 1.40
1735 1839 5.365403 TCGGAATTACTTGTCGCAAAAAT 57.635 34.783 0.00 0.00 0.00 1.82
1736 1840 4.815040 TCGGAATTACTTGTCGCAAAAA 57.185 36.364 0.00 0.00 0.00 1.94
1737 1841 4.529446 GTTCGGAATTACTTGTCGCAAAA 58.471 39.130 0.00 0.00 0.00 2.44
1738 1842 3.363182 CGTTCGGAATTACTTGTCGCAAA 60.363 43.478 0.00 0.00 0.00 3.68
1739 1843 2.156117 CGTTCGGAATTACTTGTCGCAA 59.844 45.455 0.00 0.00 0.00 4.85
1740 1844 1.722464 CGTTCGGAATTACTTGTCGCA 59.278 47.619 0.00 0.00 0.00 5.10
1741 1845 1.060122 CCGTTCGGAATTACTTGTCGC 59.940 52.381 5.19 0.00 0.00 5.19
1742 1846 2.597305 CTCCGTTCGGAATTACTTGTCG 59.403 50.000 14.79 0.00 33.41 4.35
1743 1847 2.928116 CCTCCGTTCGGAATTACTTGTC 59.072 50.000 14.79 0.00 33.41 3.18
1744 1848 2.354403 CCCTCCGTTCGGAATTACTTGT 60.354 50.000 14.79 0.00 33.41 3.16
1745 1849 2.093869 TCCCTCCGTTCGGAATTACTTG 60.094 50.000 14.79 1.97 33.41 3.16
1746 1850 2.167900 CTCCCTCCGTTCGGAATTACTT 59.832 50.000 14.79 0.00 33.41 2.24
1747 1851 1.755380 CTCCCTCCGTTCGGAATTACT 59.245 52.381 14.79 0.00 33.41 2.24
1748 1852 1.479730 ACTCCCTCCGTTCGGAATTAC 59.520 52.381 14.79 0.00 33.41 1.89
1749 1853 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
1750 1854 1.755380 CTACTCCCTCCGTTCGGAATT 59.245 52.381 14.79 0.00 33.41 2.17
1751 1855 1.341778 ACTACTCCCTCCGTTCGGAAT 60.342 52.381 14.79 2.09 33.41 3.01
1752 1856 0.038744 ACTACTCCCTCCGTTCGGAA 59.961 55.000 14.79 0.04 33.41 4.30
1753 1857 0.038744 AACTACTCCCTCCGTTCGGA 59.961 55.000 13.34 13.34 0.00 4.55
1754 1858 0.455005 GAACTACTCCCTCCGTTCGG 59.545 60.000 4.74 4.74 0.00 4.30
1755 1859 1.461559 AGAACTACTCCCTCCGTTCG 58.538 55.000 0.00 0.00 40.36 3.95
1756 1860 3.181488 GCTAAGAACTACTCCCTCCGTTC 60.181 52.174 0.00 0.00 36.81 3.95
1757 1861 2.759535 GCTAAGAACTACTCCCTCCGTT 59.240 50.000 0.00 0.00 0.00 4.44
1758 1862 2.377073 GCTAAGAACTACTCCCTCCGT 58.623 52.381 0.00 0.00 0.00 4.69
1759 1863 1.682323 GGCTAAGAACTACTCCCTCCG 59.318 57.143 0.00 0.00 0.00 4.63
1760 1864 2.748388 TGGCTAAGAACTACTCCCTCC 58.252 52.381 0.00 0.00 0.00 4.30
1761 1865 3.070302 CCATGGCTAAGAACTACTCCCTC 59.930 52.174 0.00 0.00 0.00 4.30
1762 1866 3.041946 CCATGGCTAAGAACTACTCCCT 58.958 50.000 0.00 0.00 0.00 4.20
1763 1867 2.772515 ACCATGGCTAAGAACTACTCCC 59.227 50.000 13.04 0.00 0.00 4.30
1764 1868 4.501743 GCTACCATGGCTAAGAACTACTCC 60.502 50.000 13.04 0.00 0.00 3.85
1765 1869 4.342665 AGCTACCATGGCTAAGAACTACTC 59.657 45.833 13.04 0.00 38.36 2.59
1766 1870 4.290942 AGCTACCATGGCTAAGAACTACT 58.709 43.478 13.04 0.00 38.36 2.57
1849 1953 4.142071 TGCTCTGTCTCTCATATGTCAACC 60.142 45.833 1.90 0.00 0.00 3.77
1916 2024 2.057316 GCTAGCTGCGATGTCATGTAG 58.943 52.381 7.70 0.00 0.00 2.74
2050 2158 1.766494 TTATTGCTGCTGTCATGGGG 58.234 50.000 0.00 0.00 0.00 4.96
2140 2252 1.073923 CACCTCTGCAAACCCCTTACT 59.926 52.381 0.00 0.00 0.00 2.24
2141 2253 1.534729 CACCTCTGCAAACCCCTTAC 58.465 55.000 0.00 0.00 0.00 2.34
2142 2254 0.404040 CCACCTCTGCAAACCCCTTA 59.596 55.000 0.00 0.00 0.00 2.69
2143 2255 1.153756 CCACCTCTGCAAACCCCTT 59.846 57.895 0.00 0.00 0.00 3.95
2145 2257 1.303643 CTCCACCTCTGCAAACCCC 60.304 63.158 0.00 0.00 0.00 4.95
2172 2284 1.229428 CAAGCACACACACCTACCTG 58.771 55.000 0.00 0.00 0.00 4.00
2250 2362 0.467384 AGGTAGCTAGCTCGACCGTA 59.533 55.000 23.26 0.00 37.04 4.02
2287 2399 0.600557 TGCCAAATTAGCCGGTTGTG 59.399 50.000 1.90 0.00 0.00 3.33
2312 2424 7.976734 AGAAATTATACTATGCTCCACTATCGC 59.023 37.037 0.00 0.00 0.00 4.58
2348 2460 9.927668 CAATTTAGGTGACTGGAATTTACATTT 57.072 29.630 0.00 0.00 43.88 2.32
2349 2461 8.034804 GCAATTTAGGTGACTGGAATTTACATT 58.965 33.333 0.00 0.00 43.88 2.71
2350 2462 7.397192 AGCAATTTAGGTGACTGGAATTTACAT 59.603 33.333 0.00 0.00 43.88 2.29
2353 2477 6.945435 TGAGCAATTTAGGTGACTGGAATTTA 59.055 34.615 0.00 0.00 43.88 1.40
2359 2483 5.404946 CATTTGAGCAATTTAGGTGACTGG 58.595 41.667 0.00 0.00 43.88 4.00
2428 2552 9.874205 CACCAAAATTCATCCAGTACAAAATAT 57.126 29.630 0.00 0.00 0.00 1.28
2435 2563 4.082245 CCACCACCAAAATTCATCCAGTAC 60.082 45.833 0.00 0.00 0.00 2.73
2438 2566 2.899256 ACCACCACCAAAATTCATCCAG 59.101 45.455 0.00 0.00 0.00 3.86
2444 2572 5.616270 ACCAATTTACCACCACCAAAATTC 58.384 37.500 0.00 0.00 31.05 2.17
2463 2591 8.670135 CATCCACGTCAATTTAGTTATTACCAA 58.330 33.333 0.00 0.00 0.00 3.67
2488 2616 0.892755 CGGTAGTAACTCCTGCCACA 59.107 55.000 0.00 0.00 37.08 4.17
2899 3027 1.592669 CCTCGCCGGCATCACTAAG 60.593 63.158 28.98 7.38 0.00 2.18
2901 3029 2.441348 TCCTCGCCGGCATCACTA 60.441 61.111 28.98 2.80 0.00 2.74
3049 3177 1.002274 AGGGAGAAGGCGAGGACAT 59.998 57.895 0.00 0.00 0.00 3.06
3054 3182 2.896443 GTGGAGGGAGAAGGCGAG 59.104 66.667 0.00 0.00 0.00 5.03
3060 3188 1.975407 GGACGACGTGGAGGGAGAA 60.975 63.158 4.58 0.00 0.00 2.87
3102 3230 0.033504 GGACGGCCATGTCGATGTAT 59.966 55.000 0.00 0.00 39.83 2.29
3118 3246 3.181470 GGCTAGAAGATGTTGGAGAGGAC 60.181 52.174 0.00 0.00 0.00 3.85
3184 3312 2.837532 TTTTCCTGGAGCCAAATTGC 57.162 45.000 0.00 0.00 0.00 3.56
3190 3318 0.918983 ATCCGATTTTCCTGGAGCCA 59.081 50.000 0.00 0.00 34.75 4.75
3196 3324 4.818546 AGCACAGATAATCCGATTTTCCTG 59.181 41.667 0.00 7.12 0.00 3.86
3244 3372 1.308069 ATCACACACCATTCCTGCGC 61.308 55.000 0.00 0.00 0.00 6.09
3249 3381 6.875076 ACTACTACTAATCACACACCATTCC 58.125 40.000 0.00 0.00 0.00 3.01
3253 3385 8.324306 ACTACTACTACTACTAATCACACACCA 58.676 37.037 0.00 0.00 0.00 4.17
3357 3492 7.165977 CGATCATACTATACTCACACAACACAC 59.834 40.741 0.00 0.00 0.00 3.82
3358 3493 7.148137 ACGATCATACTATACTCACACAACACA 60.148 37.037 0.00 0.00 0.00 3.72
3382 3517 7.390718 ACCGGTACCTTACCTATACTAATAACG 59.609 40.741 4.49 0.00 46.81 3.18
3399 3536 3.008594 TCATTCAACATCAACCGGTACCT 59.991 43.478 8.00 0.00 0.00 3.08
3400 3537 3.340034 TCATTCAACATCAACCGGTACC 58.660 45.455 8.00 0.16 0.00 3.34
3401 3538 5.560966 ATTCATTCAACATCAACCGGTAC 57.439 39.130 8.00 0.00 0.00 3.34
3402 3539 7.873719 ATTATTCATTCAACATCAACCGGTA 57.126 32.000 8.00 0.00 0.00 4.02
3403 3540 6.773976 ATTATTCATTCAACATCAACCGGT 57.226 33.333 0.00 0.00 0.00 5.28
3409 3546 7.376615 TGCACACAATTATTCATTCAACATCA 58.623 30.769 0.00 0.00 0.00 3.07
3454 3591 1.105457 CACCCATGCACACCATAAGG 58.895 55.000 0.00 0.00 42.21 2.69
3471 3608 4.948847 TCACTCACATATACATCTGCCAC 58.051 43.478 0.00 0.00 0.00 5.01
3495 3651 8.198109 AGTTAACACACTACATATCTCACCATC 58.802 37.037 8.61 0.00 0.00 3.51
3534 3690 5.755849 AGAGAGAAAGGTCCAACTGAAAAA 58.244 37.500 0.00 0.00 0.00 1.94
3535 3691 5.131142 AGAGAGAGAAAGGTCCAACTGAAAA 59.869 40.000 0.00 0.00 0.00 2.29
3536 3692 4.656112 AGAGAGAGAAAGGTCCAACTGAAA 59.344 41.667 0.00 0.00 0.00 2.69
3537 3693 4.039730 CAGAGAGAGAAAGGTCCAACTGAA 59.960 45.833 0.00 0.00 0.00 3.02
3538 3694 3.576118 CAGAGAGAGAAAGGTCCAACTGA 59.424 47.826 0.00 0.00 0.00 3.41
3539 3695 3.323403 ACAGAGAGAGAAAGGTCCAACTG 59.677 47.826 0.00 0.00 0.00 3.16
3540 3696 3.582164 ACAGAGAGAGAAAGGTCCAACT 58.418 45.455 0.00 0.00 0.00 3.16
3541 3697 4.344359 AACAGAGAGAGAAAGGTCCAAC 57.656 45.455 0.00 0.00 0.00 3.77
3542 3698 5.373812 AAAACAGAGAGAGAAAGGTCCAA 57.626 39.130 0.00 0.00 0.00 3.53
3543 3699 5.221661 GGTAAAACAGAGAGAGAAAGGTCCA 60.222 44.000 0.00 0.00 0.00 4.02
3544 3700 5.012251 AGGTAAAACAGAGAGAGAAAGGTCC 59.988 44.000 0.00 0.00 0.00 4.46
3545 3701 6.104146 AGGTAAAACAGAGAGAGAAAGGTC 57.896 41.667 0.00 0.00 0.00 3.85
3546 3702 6.502074 AAGGTAAAACAGAGAGAGAAAGGT 57.498 37.500 0.00 0.00 0.00 3.50
3547 3703 7.931948 TGTAAAGGTAAAACAGAGAGAGAAAGG 59.068 37.037 0.00 0.00 0.00 3.11
3548 3704 8.766151 GTGTAAAGGTAAAACAGAGAGAGAAAG 58.234 37.037 0.00 0.00 0.00 2.62
3549 3705 8.483758 AGTGTAAAGGTAAAACAGAGAGAGAAA 58.516 33.333 0.00 0.00 0.00 2.52
3550 3706 7.926555 CAGTGTAAAGGTAAAACAGAGAGAGAA 59.073 37.037 0.00 0.00 0.00 2.87
3551 3707 7.434492 CAGTGTAAAGGTAAAACAGAGAGAGA 58.566 38.462 0.00 0.00 0.00 3.10
3552 3708 6.647067 CCAGTGTAAAGGTAAAACAGAGAGAG 59.353 42.308 0.00 0.00 0.00 3.20
3553 3709 6.325545 TCCAGTGTAAAGGTAAAACAGAGAGA 59.674 38.462 0.00 0.00 0.00 3.10
3554 3710 6.424207 GTCCAGTGTAAAGGTAAAACAGAGAG 59.576 42.308 0.00 0.00 0.00 3.20
3555 3711 6.126997 TGTCCAGTGTAAAGGTAAAACAGAGA 60.127 38.462 0.00 0.00 0.00 3.10
3556 3712 6.053005 TGTCCAGTGTAAAGGTAAAACAGAG 58.947 40.000 0.00 0.00 0.00 3.35
3557 3713 5.991861 TGTCCAGTGTAAAGGTAAAACAGA 58.008 37.500 0.00 0.00 0.00 3.41
3558 3714 6.877611 ATGTCCAGTGTAAAGGTAAAACAG 57.122 37.500 0.00 0.00 0.00 3.16
3559 3715 7.994334 ACTTATGTCCAGTGTAAAGGTAAAACA 59.006 33.333 0.00 0.00 0.00 2.83
3560 3716 8.387190 ACTTATGTCCAGTGTAAAGGTAAAAC 57.613 34.615 0.00 0.00 0.00 2.43
3561 3717 8.983702 AACTTATGTCCAGTGTAAAGGTAAAA 57.016 30.769 0.00 0.00 0.00 1.52
3562 3718 8.983702 AAACTTATGTCCAGTGTAAAGGTAAA 57.016 30.769 0.00 0.00 0.00 2.01
3563 3719 8.434392 AGAAACTTATGTCCAGTGTAAAGGTAA 58.566 33.333 0.00 0.00 0.00 2.85
3564 3720 7.970102 AGAAACTTATGTCCAGTGTAAAGGTA 58.030 34.615 0.00 0.00 0.00 3.08
3565 3721 6.838382 AGAAACTTATGTCCAGTGTAAAGGT 58.162 36.000 0.00 0.00 0.00 3.50
3566 3722 7.661847 AGAAGAAACTTATGTCCAGTGTAAAGG 59.338 37.037 0.00 0.00 0.00 3.11
3567 3723 8.608844 AGAAGAAACTTATGTCCAGTGTAAAG 57.391 34.615 0.00 0.00 0.00 1.85
3568 3724 8.429641 AGAGAAGAAACTTATGTCCAGTGTAAA 58.570 33.333 0.00 0.00 0.00 2.01
3569 3725 7.963532 AGAGAAGAAACTTATGTCCAGTGTAA 58.036 34.615 0.00 0.00 0.00 2.41
3570 3726 7.540474 AGAGAAGAAACTTATGTCCAGTGTA 57.460 36.000 0.00 0.00 0.00 2.90
3571 3727 6.426646 AGAGAAGAAACTTATGTCCAGTGT 57.573 37.500 0.00 0.00 0.00 3.55
3572 3728 6.931281 TGAAGAGAAGAAACTTATGTCCAGTG 59.069 38.462 0.00 0.00 0.00 3.66
3573 3729 7.067496 TGAAGAGAAGAAACTTATGTCCAGT 57.933 36.000 0.00 0.00 0.00 4.00
3574 3730 6.593382 CCTGAAGAGAAGAAACTTATGTCCAG 59.407 42.308 0.00 0.00 0.00 3.86
3575 3731 6.467677 CCTGAAGAGAAGAAACTTATGTCCA 58.532 40.000 0.00 0.00 0.00 4.02
3576 3732 5.877564 CCCTGAAGAGAAGAAACTTATGTCC 59.122 44.000 0.00 0.00 0.00 4.02
3577 3733 5.877564 CCCCTGAAGAGAAGAAACTTATGTC 59.122 44.000 0.00 0.00 0.00 3.06
3578 3734 5.804771 GCCCCTGAAGAGAAGAAACTTATGT 60.805 44.000 0.00 0.00 0.00 2.29
3579 3735 4.637977 GCCCCTGAAGAGAAGAAACTTATG 59.362 45.833 0.00 0.00 0.00 1.90
3580 3736 4.289672 TGCCCCTGAAGAGAAGAAACTTAT 59.710 41.667 0.00 0.00 0.00 1.73
3581 3737 3.650942 TGCCCCTGAAGAGAAGAAACTTA 59.349 43.478 0.00 0.00 0.00 2.24
3582 3738 2.443255 TGCCCCTGAAGAGAAGAAACTT 59.557 45.455 0.00 0.00 0.00 2.66
3583 3739 2.057922 TGCCCCTGAAGAGAAGAAACT 58.942 47.619 0.00 0.00 0.00 2.66
3584 3740 2.155279 GTGCCCCTGAAGAGAAGAAAC 58.845 52.381 0.00 0.00 0.00 2.78
3585 3741 2.057922 AGTGCCCCTGAAGAGAAGAAA 58.942 47.619 0.00 0.00 0.00 2.52
3586 3742 1.349026 CAGTGCCCCTGAAGAGAAGAA 59.651 52.381 0.00 0.00 44.49 2.52
3587 3743 0.979665 CAGTGCCCCTGAAGAGAAGA 59.020 55.000 0.00 0.00 44.49 2.87
3588 3744 0.689623 ACAGTGCCCCTGAAGAGAAG 59.310 55.000 7.43 0.00 44.49 2.85
3589 3745 1.140312 AACAGTGCCCCTGAAGAGAA 58.860 50.000 7.43 0.00 44.49 2.87
3590 3746 2.024176 TAACAGTGCCCCTGAAGAGA 57.976 50.000 7.43 0.00 44.49 3.10
3591 3747 2.859165 TTAACAGTGCCCCTGAAGAG 57.141 50.000 7.43 0.00 44.49 2.85
3592 3748 2.354704 CGATTAACAGTGCCCCTGAAGA 60.355 50.000 7.43 0.00 44.49 2.87
3593 3749 2.009774 CGATTAACAGTGCCCCTGAAG 58.990 52.381 7.43 0.00 44.49 3.02
3594 3750 1.349688 ACGATTAACAGTGCCCCTGAA 59.650 47.619 7.43 0.00 44.49 3.02
3595 3751 0.981183 ACGATTAACAGTGCCCCTGA 59.019 50.000 7.43 0.00 44.49 3.86
3597 3753 0.690762 ACACGATTAACAGTGCCCCT 59.309 50.000 10.89 0.00 41.72 4.79
3598 3754 1.199097 CAACACGATTAACAGTGCCCC 59.801 52.381 10.89 0.00 41.72 5.80
3599 3755 1.877443 ACAACACGATTAACAGTGCCC 59.123 47.619 10.89 0.00 41.72 5.36
3600 3756 3.002862 TGAACAACACGATTAACAGTGCC 59.997 43.478 10.89 0.00 41.72 5.01
3601 3757 4.203950 TGAACAACACGATTAACAGTGC 57.796 40.909 10.89 0.00 41.72 4.40
3602 3758 5.403897 ACTGAACAACACGATTAACAGTG 57.596 39.130 9.75 9.75 43.46 3.66
3603 3759 7.724305 ATAACTGAACAACACGATTAACAGT 57.276 32.000 0.00 0.00 38.67 3.55
3604 3760 8.495949 AGAATAACTGAACAACACGATTAACAG 58.504 33.333 0.00 0.00 0.00 3.16
3605 3761 8.373048 AGAATAACTGAACAACACGATTAACA 57.627 30.769 0.00 0.00 0.00 2.41
3606 3762 9.103048 CAAGAATAACTGAACAACACGATTAAC 57.897 33.333 0.00 0.00 0.00 2.01
3607 3763 9.047371 TCAAGAATAACTGAACAACACGATTAA 57.953 29.630 0.00 0.00 0.00 1.40
3608 3764 8.596271 TCAAGAATAACTGAACAACACGATTA 57.404 30.769 0.00 0.00 0.00 1.75
3609 3765 7.490962 TCAAGAATAACTGAACAACACGATT 57.509 32.000 0.00 0.00 0.00 3.34
3610 3766 7.490962 TTCAAGAATAACTGAACAACACGAT 57.509 32.000 0.00 0.00 0.00 3.73
3611 3767 6.912203 TTCAAGAATAACTGAACAACACGA 57.088 33.333 0.00 0.00 0.00 4.35
3612 3768 7.351981 TCATTCAAGAATAACTGAACAACACG 58.648 34.615 0.00 0.00 0.00 4.49
3613 3769 9.515020 TTTCATTCAAGAATAACTGAACAACAC 57.485 29.630 0.00 0.00 0.00 3.32
3674 3830 8.906867 CCATCTAGGAAAGCATTCTTTTATCAA 58.093 33.333 1.19 0.00 42.24 2.57
3675 3831 8.055181 ACCATCTAGGAAAGCATTCTTTTATCA 58.945 33.333 1.19 0.00 42.24 2.15
3676 3832 8.457238 ACCATCTAGGAAAGCATTCTTTTATC 57.543 34.615 1.19 0.00 42.24 1.75
3677 3833 9.343539 GTACCATCTAGGAAAGCATTCTTTTAT 57.656 33.333 1.19 0.00 42.24 1.40
3678 3834 7.773690 GGTACCATCTAGGAAAGCATTCTTTTA 59.226 37.037 7.15 0.00 42.24 1.52
3679 3835 6.603599 GGTACCATCTAGGAAAGCATTCTTTT 59.396 38.462 7.15 0.00 42.24 2.27
3680 3836 6.122964 GGTACCATCTAGGAAAGCATTCTTT 58.877 40.000 7.15 0.00 44.67 2.52
3681 3837 5.191722 TGGTACCATCTAGGAAAGCATTCTT 59.808 40.000 11.60 0.00 41.22 2.52
3682 3838 4.721776 TGGTACCATCTAGGAAAGCATTCT 59.278 41.667 11.60 0.00 41.22 2.40
3683 3839 5.036117 TGGTACCATCTAGGAAAGCATTC 57.964 43.478 11.60 0.00 41.22 2.67
3684 3840 5.380043 CATGGTACCATCTAGGAAAGCATT 58.620 41.667 24.99 0.00 40.48 3.56
3685 3841 4.747931 GCATGGTACCATCTAGGAAAGCAT 60.748 45.833 24.99 0.00 41.94 3.79
3686 3842 3.433598 GCATGGTACCATCTAGGAAAGCA 60.434 47.826 24.99 0.00 41.22 3.91
3687 3843 3.142174 GCATGGTACCATCTAGGAAAGC 58.858 50.000 24.99 17.72 41.22 3.51
3688 3844 4.636249 GAGCATGGTACCATCTAGGAAAG 58.364 47.826 24.99 11.90 41.22 2.62
3689 3845 3.069586 CGAGCATGGTACCATCTAGGAAA 59.930 47.826 24.99 0.00 41.22 3.13
3690 3846 2.628178 CGAGCATGGTACCATCTAGGAA 59.372 50.000 24.99 0.00 41.22 3.36
3691 3847 2.158519 TCGAGCATGGTACCATCTAGGA 60.159 50.000 24.99 18.87 41.22 2.94
3692 3848 2.239400 TCGAGCATGGTACCATCTAGG 58.761 52.381 24.99 14.46 45.67 3.02
3693 3849 5.843673 ATATCGAGCATGGTACCATCTAG 57.156 43.478 24.99 21.30 33.90 2.43
3694 3850 5.480422 ACAATATCGAGCATGGTACCATCTA 59.520 40.000 24.99 7.53 33.90 1.98
3695 3851 4.284490 ACAATATCGAGCATGGTACCATCT 59.716 41.667 24.99 22.16 33.90 2.90
3696 3852 4.569943 ACAATATCGAGCATGGTACCATC 58.430 43.478 24.99 18.17 33.90 3.51
3697 3853 4.623932 ACAATATCGAGCATGGTACCAT 57.376 40.909 22.23 22.23 37.08 3.55
3698 3854 4.100963 AGAACAATATCGAGCATGGTACCA 59.899 41.667 18.99 18.99 0.00 3.25
3699 3855 4.632153 AGAACAATATCGAGCATGGTACC 58.368 43.478 4.43 4.43 0.00 3.34
3700 3856 5.986135 AGAAGAACAATATCGAGCATGGTAC 59.014 40.000 0.00 0.00 0.00 3.34
3701 3857 6.161855 AGAAGAACAATATCGAGCATGGTA 57.838 37.500 0.00 0.00 0.00 3.25
3702 3858 5.028549 AGAAGAACAATATCGAGCATGGT 57.971 39.130 0.00 0.00 0.00 3.55
3703 3859 5.998454 AAGAAGAACAATATCGAGCATGG 57.002 39.130 0.00 0.00 0.00 3.66
3704 3860 7.466805 TGAAAAGAAGAACAATATCGAGCATG 58.533 34.615 0.00 0.00 0.00 4.06
3705 3861 7.335422 ACTGAAAAGAAGAACAATATCGAGCAT 59.665 33.333 0.00 0.00 0.00 3.79
3706 3862 6.650807 ACTGAAAAGAAGAACAATATCGAGCA 59.349 34.615 0.00 0.00 0.00 4.26
3707 3863 6.958193 CACTGAAAAGAAGAACAATATCGAGC 59.042 38.462 0.00 0.00 0.00 5.03
3708 3864 8.244494 TCACTGAAAAGAAGAACAATATCGAG 57.756 34.615 0.00 0.00 0.00 4.04
3709 3865 8.601845 TTCACTGAAAAGAAGAACAATATCGA 57.398 30.769 0.00 0.00 0.00 3.59
3710 3866 8.712363 TCTTCACTGAAAAGAAGAACAATATCG 58.288 33.333 2.65 0.00 45.13 2.92
3712 3868 9.784531 TCTCTTCACTGAAAAGAAGAACAATAT 57.215 29.630 6.37 0.00 46.71 1.28
3713 3869 9.613428 TTCTCTTCACTGAAAAGAAGAACAATA 57.387 29.630 3.76 0.00 46.71 1.90
3714 3870 8.511604 TTCTCTTCACTGAAAAGAAGAACAAT 57.488 30.769 3.76 0.00 46.71 2.71
3715 3871 7.824289 TCTTCTCTTCACTGAAAAGAAGAACAA 59.176 33.333 25.63 10.77 46.71 2.83
3716 3872 7.331026 TCTTCTCTTCACTGAAAAGAAGAACA 58.669 34.615 25.63 11.04 46.71 3.18
3717 3873 7.518211 GCTCTTCTCTTCACTGAAAAGAAGAAC 60.518 40.741 26.76 21.93 46.68 3.01
3718 3874 6.481644 GCTCTTCTCTTCACTGAAAAGAAGAA 59.518 38.462 26.76 16.45 46.68 2.52
3719 3875 5.988561 GCTCTTCTCTTCACTGAAAAGAAGA 59.011 40.000 25.86 25.86 45.83 2.87
3720 3876 5.757320 TGCTCTTCTCTTCACTGAAAAGAAG 59.243 40.000 21.77 21.77 42.67 2.85
3721 3877 5.525378 GTGCTCTTCTCTTCACTGAAAAGAA 59.475 40.000 7.23 7.23 32.60 2.52
3722 3878 5.053145 GTGCTCTTCTCTTCACTGAAAAGA 58.947 41.667 4.90 4.90 0.00 2.52
3723 3879 4.813161 TGTGCTCTTCTCTTCACTGAAAAG 59.187 41.667 0.00 0.00 0.00 2.27
3724 3880 4.769688 TGTGCTCTTCTCTTCACTGAAAA 58.230 39.130 0.00 0.00 0.00 2.29
3725 3881 4.406648 TGTGCTCTTCTCTTCACTGAAA 57.593 40.909 0.00 0.00 0.00 2.69
3726 3882 4.406648 TTGTGCTCTTCTCTTCACTGAA 57.593 40.909 0.00 0.00 0.00 3.02
3727 3883 4.613925 ATTGTGCTCTTCTCTTCACTGA 57.386 40.909 0.00 0.00 0.00 3.41
3728 3884 4.753610 TCAATTGTGCTCTTCTCTTCACTG 59.246 41.667 5.13 0.00 0.00 3.66
3729 3885 4.965814 TCAATTGTGCTCTTCTCTTCACT 58.034 39.130 5.13 0.00 0.00 3.41
3730 3886 4.993584 TCTCAATTGTGCTCTTCTCTTCAC 59.006 41.667 5.13 0.00 0.00 3.18
3731 3887 5.219343 TCTCAATTGTGCTCTTCTCTTCA 57.781 39.130 5.13 0.00 0.00 3.02
3732 3888 7.332926 TGTTATCTCAATTGTGCTCTTCTCTTC 59.667 37.037 5.13 0.00 0.00 2.87
3733 3889 7.164122 TGTTATCTCAATTGTGCTCTTCTCTT 58.836 34.615 5.13 0.00 0.00 2.85
3734 3890 6.705302 TGTTATCTCAATTGTGCTCTTCTCT 58.295 36.000 5.13 0.00 0.00 3.10
3735 3891 6.456718 GCTGTTATCTCAATTGTGCTCTTCTC 60.457 42.308 5.13 0.00 0.00 2.87
3736 3892 5.353678 GCTGTTATCTCAATTGTGCTCTTCT 59.646 40.000 5.13 0.00 0.00 2.85
3737 3893 5.567552 GCTGTTATCTCAATTGTGCTCTTC 58.432 41.667 5.13 0.00 0.00 2.87
3738 3894 4.093998 CGCTGTTATCTCAATTGTGCTCTT 59.906 41.667 5.13 0.00 0.00 2.85
3739 3895 3.620374 CGCTGTTATCTCAATTGTGCTCT 59.380 43.478 5.13 0.00 0.00 4.09
3740 3896 3.242543 CCGCTGTTATCTCAATTGTGCTC 60.243 47.826 5.13 0.00 0.00 4.26
3741 3897 2.679837 CCGCTGTTATCTCAATTGTGCT 59.320 45.455 5.13 0.00 0.00 4.40
3742 3898 2.420022 ACCGCTGTTATCTCAATTGTGC 59.580 45.455 5.13 0.00 0.00 4.57
3743 3899 3.436704 ACACCGCTGTTATCTCAATTGTG 59.563 43.478 5.13 2.93 0.00 3.33
3744 3900 3.436704 CACACCGCTGTTATCTCAATTGT 59.563 43.478 5.13 0.00 0.00 2.71
3745 3901 3.728864 GCACACCGCTGTTATCTCAATTG 60.729 47.826 0.00 0.00 37.77 2.32
3746 3902 2.420022 GCACACCGCTGTTATCTCAATT 59.580 45.455 0.00 0.00 37.77 2.32
3747 3903 2.009774 GCACACCGCTGTTATCTCAAT 58.990 47.619 0.00 0.00 37.77 2.57
3748 3904 1.438651 GCACACCGCTGTTATCTCAA 58.561 50.000 0.00 0.00 37.77 3.02
3749 3905 3.137484 GCACACCGCTGTTATCTCA 57.863 52.632 0.00 0.00 37.77 3.27
3766 3922 1.468054 CGCTAACTCAATGCCCAAAGC 60.468 52.381 0.00 0.00 44.14 3.51
3767 3923 1.812571 ACGCTAACTCAATGCCCAAAG 59.187 47.619 0.00 0.00 0.00 2.77
3768 3924 1.810151 GACGCTAACTCAATGCCCAAA 59.190 47.619 0.00 0.00 0.00 3.28
3769 3925 1.271108 TGACGCTAACTCAATGCCCAA 60.271 47.619 0.00 0.00 0.00 4.12
3770 3926 0.323302 TGACGCTAACTCAATGCCCA 59.677 50.000 0.00 0.00 0.00 5.36
3771 3927 1.448985 TTGACGCTAACTCAATGCCC 58.551 50.000 0.00 0.00 0.00 5.36
3772 3928 4.094294 TGTTATTGACGCTAACTCAATGCC 59.906 41.667 8.10 0.97 38.53 4.40
3773 3929 5.216566 TGTTATTGACGCTAACTCAATGC 57.783 39.130 8.10 3.15 38.53 3.56
3774 3930 5.258622 GCTGTTATTGACGCTAACTCAATG 58.741 41.667 8.10 0.00 38.53 2.82
3775 3931 4.332819 GGCTGTTATTGACGCTAACTCAAT 59.667 41.667 3.98 3.98 40.64 2.57
3776 3932 3.682858 GGCTGTTATTGACGCTAACTCAA 59.317 43.478 0.00 0.00 31.71 3.02
3777 3933 3.259064 GGCTGTTATTGACGCTAACTCA 58.741 45.455 0.00 0.00 31.71 3.41
3778 3934 3.259064 TGGCTGTTATTGACGCTAACTC 58.741 45.455 0.00 0.00 31.71 3.01
3779 3935 3.328382 TGGCTGTTATTGACGCTAACT 57.672 42.857 0.00 0.00 31.71 2.24
3780 3936 3.682858 TCTTGGCTGTTATTGACGCTAAC 59.317 43.478 0.00 0.00 30.23 2.34
3781 3937 3.932822 TCTTGGCTGTTATTGACGCTAA 58.067 40.909 0.00 0.00 31.59 3.09
3782 3938 3.603158 TCTTGGCTGTTATTGACGCTA 57.397 42.857 0.00 0.00 0.00 4.26
3783 3939 2.472695 TCTTGGCTGTTATTGACGCT 57.527 45.000 0.00 0.00 0.00 5.07
3784 3940 2.484264 ACTTCTTGGCTGTTATTGACGC 59.516 45.455 0.00 0.00 0.00 5.19
3785 3941 3.498397 ACACTTCTTGGCTGTTATTGACG 59.502 43.478 0.00 0.00 0.00 4.35
3786 3942 5.438761 AACACTTCTTGGCTGTTATTGAC 57.561 39.130 0.00 0.00 0.00 3.18
3787 3943 7.309133 CCATTAACACTTCTTGGCTGTTATTGA 60.309 37.037 13.80 0.00 35.59 2.57
3788 3944 6.808212 CCATTAACACTTCTTGGCTGTTATTG 59.192 38.462 8.68 8.68 34.49 1.90
3789 3945 6.924111 CCATTAACACTTCTTGGCTGTTATT 58.076 36.000 0.00 0.00 31.96 1.40
3790 3946 6.515272 CCATTAACACTTCTTGGCTGTTAT 57.485 37.500 0.00 0.00 31.96 1.89
3791 3947 5.957842 CCATTAACACTTCTTGGCTGTTA 57.042 39.130 0.00 0.00 30.76 2.41
3792 3948 4.853924 CCATTAACACTTCTTGGCTGTT 57.146 40.909 0.00 0.00 32.85 3.16
3797 3953 3.005684 TGCAAGCCATTAACACTTCTTGG 59.994 43.478 0.00 0.00 33.53 3.61
3798 3954 4.241590 TGCAAGCCATTAACACTTCTTG 57.758 40.909 0.00 0.00 35.37 3.02
3799 3955 4.281688 ACATGCAAGCCATTAACACTTCTT 59.718 37.500 0.00 0.00 29.71 2.52
3800 3956 3.828451 ACATGCAAGCCATTAACACTTCT 59.172 39.130 0.00 0.00 29.71 2.85
3801 3957 4.178545 ACATGCAAGCCATTAACACTTC 57.821 40.909 0.00 0.00 29.71 3.01
3802 3958 4.039004 TCAACATGCAAGCCATTAACACTT 59.961 37.500 0.00 0.00 29.71 3.16
3803 3959 3.573538 TCAACATGCAAGCCATTAACACT 59.426 39.130 0.00 0.00 29.71 3.55
3804 3960 3.911868 TCAACATGCAAGCCATTAACAC 58.088 40.909 0.00 0.00 29.71 3.32
3805 3961 4.021280 ACATCAACATGCAAGCCATTAACA 60.021 37.500 0.00 0.00 32.57 2.41
3806 3962 4.497300 ACATCAACATGCAAGCCATTAAC 58.503 39.130 0.00 0.00 32.57 2.01
3807 3963 4.804868 ACATCAACATGCAAGCCATTAA 57.195 36.364 0.00 0.00 32.57 1.40
3808 3964 4.021280 ACAACATCAACATGCAAGCCATTA 60.021 37.500 0.00 0.00 32.57 1.90
3809 3965 3.244284 ACAACATCAACATGCAAGCCATT 60.244 39.130 0.00 0.00 32.57 3.16
3810 3966 2.300723 ACAACATCAACATGCAAGCCAT 59.699 40.909 0.00 0.00 32.57 4.40
3811 3967 1.687660 ACAACATCAACATGCAAGCCA 59.312 42.857 0.00 0.00 32.57 4.75
3812 3968 2.063266 CACAACATCAACATGCAAGCC 58.937 47.619 0.00 0.00 32.57 4.35
3813 3969 2.727798 GACACAACATCAACATGCAAGC 59.272 45.455 0.00 0.00 32.57 4.01
3814 3970 3.311106 GGACACAACATCAACATGCAAG 58.689 45.455 0.00 0.00 32.57 4.01
3815 3971 2.035704 GGGACACAACATCAACATGCAA 59.964 45.455 0.00 0.00 32.57 4.08
3816 3972 1.612950 GGGACACAACATCAACATGCA 59.387 47.619 0.00 0.00 32.57 3.96
3817 3973 1.612950 TGGGACACAACATCAACATGC 59.387 47.619 0.00 0.00 32.57 4.06
3832 3988 8.870075 AGGATAAAAATATCTGCTAATGGGAC 57.130 34.615 0.00 0.00 0.00 4.46
3833 3989 9.881773 AAAGGATAAAAATATCTGCTAATGGGA 57.118 29.630 0.00 0.00 0.00 4.37
3987 4143 9.730420 GTGGACTTTTTATTAAATCGCATGTAT 57.270 29.630 0.00 0.00 0.00 2.29
3988 4144 8.185505 GGTGGACTTTTTATTAAATCGCATGTA 58.814 33.333 0.00 0.00 0.00 2.29
3989 4145 7.033185 GGTGGACTTTTTATTAAATCGCATGT 58.967 34.615 0.00 0.00 0.00 3.21
3990 4146 7.257722 AGGTGGACTTTTTATTAAATCGCATG 58.742 34.615 0.00 0.00 0.00 4.06
3991 4147 7.404671 AGGTGGACTTTTTATTAAATCGCAT 57.595 32.000 0.00 0.00 0.00 4.73
3992 4148 6.827586 AGGTGGACTTTTTATTAAATCGCA 57.172 33.333 0.00 0.00 0.00 5.10
3993 4149 9.797556 AAATAGGTGGACTTTTTATTAAATCGC 57.202 29.630 0.00 0.00 30.06 4.58
4075 4231 9.802039 TGGTTTGGACACTTTTTAGAACTATAT 57.198 29.630 0.00 0.00 0.00 0.86
4076 4232 9.802039 ATGGTTTGGACACTTTTTAGAACTATA 57.198 29.630 0.00 0.00 0.00 1.31
4077 4233 8.706322 ATGGTTTGGACACTTTTTAGAACTAT 57.294 30.769 0.00 0.00 0.00 2.12
4078 4234 9.802039 ATATGGTTTGGACACTTTTTAGAACTA 57.198 29.630 0.00 0.00 0.00 2.24
4079 4235 8.706322 ATATGGTTTGGACACTTTTTAGAACT 57.294 30.769 0.00 0.00 0.00 3.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.