Multiple sequence alignment - TraesCS3B01G595600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G595600 chr3B 100.000 5126 0 0 1 5126 818748122 818753247 0.000000e+00 9467.0
1 TraesCS3B01G595600 chr3B 89.981 519 34 3 1221 1739 56218951 56218451 0.000000e+00 654.0
2 TraesCS3B01G595600 chr3B 91.946 149 12 0 4547 4695 672783817 672783965 5.200000e-50 209.0
3 TraesCS3B01G595600 chr3B 93.182 88 6 0 2081 2168 546379688 546379601 4.170000e-26 130.0
4 TraesCS3B01G595600 chr3D 90.299 2206 131 34 1 2170 608779274 608777116 0.000000e+00 2811.0
5 TraesCS3B01G595600 chr3D 90.829 796 41 7 2779 3567 608776468 608775698 0.000000e+00 1037.0
6 TraesCS3B01G595600 chr3D 96.113 566 19 3 3988 4552 608775302 608774739 0.000000e+00 920.0
7 TraesCS3B01G595600 chr3D 94.552 569 22 7 2187 2751 608777030 608776467 0.000000e+00 870.0
8 TraesCS3B01G595600 chr3D 93.850 439 24 1 3554 3992 608775765 608775330 0.000000e+00 658.0
9 TraesCS3B01G595600 chr3D 85.993 307 29 10 4830 5124 608774610 608774306 2.980000e-82 316.0
10 TraesCS3B01G595600 chr3D 87.121 264 31 3 6 268 608779942 608779681 3.880000e-76 296.0
11 TraesCS3B01G595600 chr3D 97.403 77 1 1 4757 4833 608774714 608774639 4.170000e-26 130.0
12 TraesCS3B01G595600 chr3D 93.421 76 2 2 4669 4741 610017628 610017553 5.430000e-20 110.0
13 TraesCS3B01G595600 chr3A 87.744 2203 152 44 1 2170 741975565 741973448 0.000000e+00 2464.0
14 TraesCS3B01G595600 chr3A 89.209 1390 84 24 2187 3567 741973361 741972029 0.000000e+00 1676.0
15 TraesCS3B01G595600 chr3A 94.068 708 35 3 1362 2063 108577215 108577921 0.000000e+00 1068.0
16 TraesCS3B01G595600 chr3A 88.917 794 66 8 1281 2063 626512504 626511722 0.000000e+00 959.0
17 TraesCS3B01G595600 chr3A 94.925 532 23 4 3988 4518 741971630 741971102 0.000000e+00 830.0
18 TraesCS3B01G595600 chr3A 93.622 439 28 0 3554 3992 741972096 741971658 0.000000e+00 656.0
19 TraesCS3B01G595600 chr3A 81.731 520 84 9 1 513 741976270 741975755 1.710000e-114 424.0
20 TraesCS3B01G595600 chr3A 76.613 744 131 26 4 722 741978053 741977328 2.250000e-98 370.0
21 TraesCS3B01G595600 chr3A 87.987 308 19 8 4835 5124 741970954 741970647 1.060000e-91 348.0
22 TraesCS3B01G595600 chr3A 88.235 68 4 2 4675 4742 550395276 550395339 1.530000e-10 78.7
23 TraesCS3B01G595600 chr4A 92.500 840 47 5 1229 2063 363135770 363136598 0.000000e+00 1188.0
24 TraesCS3B01G595600 chr4A 89.362 94 6 1 2081 2170 363138000 363138093 1.170000e-21 115.0
25 TraesCS3B01G595600 chr4A 100.000 28 0 0 4543 4570 388226243 388226216 9.000000e-03 52.8
26 TraesCS3B01G595600 chr7D 91.873 849 52 6 1221 2063 7980530 7979693 0.000000e+00 1170.0
27 TraesCS3B01G595600 chr7D 91.489 94 4 1 2081 2170 7978064 7977971 5.390000e-25 126.0
28 TraesCS3B01G595600 chr7D 93.902 82 5 0 1221 1302 590893714 590893795 1.940000e-24 124.0
29 TraesCS3B01G595600 chr7D 88.235 68 5 3 4694 4760 92212933 92212998 1.530000e-10 78.7
30 TraesCS3B01G595600 chr1A 93.952 711 33 3 1362 2063 416018815 416019524 0.000000e+00 1066.0
31 TraesCS3B01G595600 chr7A 93.812 711 34 3 1362 2063 731415442 731414733 0.000000e+00 1061.0
32 TraesCS3B01G595600 chr7A 96.923 130 4 0 4566 4695 78506266 78506137 8.640000e-53 219.0
33 TraesCS3B01G595600 chr5B 87.324 781 65 6 1221 1992 689259529 689258774 0.000000e+00 863.0
34 TraesCS3B01G595600 chr5B 93.919 148 8 1 4548 4695 318403655 318403801 6.680000e-54 222.0
35 TraesCS3B01G595600 chr5B 93.617 141 7 1 4568 4706 671328846 671328706 5.200000e-50 209.0
36 TraesCS3B01G595600 chr5B 94.444 90 5 0 2081 2170 28670067 28670156 6.920000e-29 139.0
37 TraesCS3B01G595600 chr5B 93.333 90 6 0 2081 2170 689257195 689257106 3.220000e-27 134.0
38 TraesCS3B01G595600 chr5B 100.000 34 0 0 4549 4582 69131866 69131899 4.280000e-06 63.9
39 TraesCS3B01G595600 chr7B 94.545 550 20 3 1362 1902 526033742 526034290 0.000000e+00 841.0
40 TraesCS3B01G595600 chr7B 89.552 67 4 2 4675 4741 32466960 32466897 1.180000e-11 82.4
41 TraesCS3B01G595600 chr7B 87.143 70 6 3 4692 4759 154681559 154681491 5.500000e-10 76.8
42 TraesCS3B01G595600 chrUn 94.364 550 21 2 1362 1902 241177810 241177262 0.000000e+00 835.0
43 TraesCS3B01G595600 chrUn 100.000 30 0 0 4541 4570 356159685 356159656 7.170000e-04 56.5
44 TraesCS3B01G595600 chr1B 89.776 313 23 5 1979 2290 60957417 60957113 4.810000e-105 392.0
45 TraesCS3B01G595600 chr1B 91.781 146 12 0 4550 4695 390879118 390878973 2.420000e-48 204.0
46 TraesCS3B01G595600 chr1B 91.935 62 2 3 4694 4754 240502134 240502193 3.290000e-12 84.2
47 TraesCS3B01G595600 chr5D 93.878 147 6 3 4569 4714 231736780 231736924 8.640000e-53 219.0
48 TraesCS3B01G595600 chr1D 96.899 129 4 0 4567 4695 368091099 368090971 3.110000e-52 217.0
49 TraesCS3B01G595600 chr2B 93.151 146 9 1 4550 4695 578606357 578606501 4.020000e-51 213.0
50 TraesCS3B01G595600 chr2A 91.275 149 13 0 4547 4695 53918106 53918254 2.420000e-48 204.0
51 TraesCS3B01G595600 chr2A 94.737 57 2 1 4701 4756 438726389 438726445 2.540000e-13 87.9
52 TraesCS3B01G595600 chr6D 84.360 211 8 5 1221 1431 380599363 380599178 3.150000e-42 183.0
53 TraesCS3B01G595600 chr6D 89.362 94 6 1 2081 2170 380598566 380598473 1.170000e-21 115.0
54 TraesCS3B01G595600 chr4B 89.552 67 5 2 4675 4741 286072563 286072627 3.290000e-12 84.2
55 TraesCS3B01G595600 chr4B 100.000 31 0 0 4550 4580 64396064 64396034 1.990000e-04 58.4
56 TraesCS3B01G595600 chr5A 92.982 57 2 2 4694 4750 686412857 686412911 1.180000e-11 82.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G595600 chr3B 818748122 818753247 5125 False 9467.000000 9467 100.000000 1 5126 1 chr3B.!!$F2 5125
1 TraesCS3B01G595600 chr3B 56218451 56218951 500 True 654.000000 654 89.981000 1221 1739 1 chr3B.!!$R1 518
2 TraesCS3B01G595600 chr3D 608774306 608779942 5636 True 879.750000 2811 92.020000 1 5124 8 chr3D.!!$R2 5123
3 TraesCS3B01G595600 chr3A 108577215 108577921 706 False 1068.000000 1068 94.068000 1362 2063 1 chr3A.!!$F1 701
4 TraesCS3B01G595600 chr3A 741970647 741978053 7406 True 966.857143 2464 87.404429 1 5124 7 chr3A.!!$R2 5123
5 TraesCS3B01G595600 chr3A 626511722 626512504 782 True 959.000000 959 88.917000 1281 2063 1 chr3A.!!$R1 782
6 TraesCS3B01G595600 chr4A 363135770 363138093 2323 False 651.500000 1188 90.931000 1229 2170 2 chr4A.!!$F1 941
7 TraesCS3B01G595600 chr7D 7977971 7980530 2559 True 648.000000 1170 91.681000 1221 2170 2 chr7D.!!$R1 949
8 TraesCS3B01G595600 chr1A 416018815 416019524 709 False 1066.000000 1066 93.952000 1362 2063 1 chr1A.!!$F1 701
9 TraesCS3B01G595600 chr7A 731414733 731415442 709 True 1061.000000 1061 93.812000 1362 2063 1 chr7A.!!$R2 701
10 TraesCS3B01G595600 chr5B 689257106 689259529 2423 True 498.500000 863 90.328500 1221 2170 2 chr5B.!!$R2 949
11 TraesCS3B01G595600 chr7B 526033742 526034290 548 False 841.000000 841 94.545000 1362 1902 1 chr7B.!!$F1 540
12 TraesCS3B01G595600 chrUn 241177262 241177810 548 True 835.000000 835 94.364000 1362 1902 1 chrUn.!!$R1 540

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
978 3520 1.152735 CGGGAGAGGCTAGGCTACA 60.153 63.158 20.27 0.0 0.00 2.74 F
2770 7083 0.625316 AGGCATAACATCCCTGCACA 59.375 50.000 0.00 0.0 37.64 4.57 F
2890 7203 0.111253 CTTTCCAGGTCTGTGGGCTT 59.889 55.000 0.00 0.0 38.26 4.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2773 7086 0.235665 CGTGCGCAAGTGAGTTGATT 59.764 50.0 14.00 0.0 38.60 2.57 R
4107 8458 0.036010 CTCACCGGATGTGGCTTCTT 60.036 55.0 9.46 0.0 45.48 2.52 R
4140 8491 0.519077 CTTCTTCTGCTTTGGTCGGC 59.481 55.0 0.00 0.0 0.00 5.54 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
57 1876 4.970662 AATATGGGCATATCGATTGTGC 57.029 40.909 20.85 20.85 33.13 4.57
138 1957 2.227149 ACGAATACAGTCTGTGTGCGTA 59.773 45.455 28.50 3.75 40.69 4.42
145 1964 2.163613 CAGTCTGTGTGCGTAGATACCA 59.836 50.000 0.00 0.00 0.00 3.25
159 1978 8.402472 TGCGTAGATACCATTATTTTTGGAAAG 58.598 33.333 0.00 0.00 37.69 2.62
161 1980 9.716507 CGTAGATACCATTATTTTTGGAAAGTG 57.283 33.333 0.00 0.00 37.69 3.16
171 1990 8.844441 TTATTTTTGGAAAGTGTACTCAAACG 57.156 30.769 0.00 0.00 0.00 3.60
211 2030 3.339253 GGTCGGTACCAATACAAAGGT 57.661 47.619 13.54 0.00 45.98 3.50
248 2067 3.924013 ATGCGGGGACAGAGGGTGA 62.924 63.158 0.00 0.00 0.00 4.02
249 2068 3.083997 GCGGGGACAGAGGGTGAT 61.084 66.667 0.00 0.00 0.00 3.06
268 2087 4.719369 GAAGTCTGGGCGTCGCGT 62.719 66.667 11.75 0.00 0.00 6.01
281 2121 4.742201 CGCGTGTGTGGAGGGGAG 62.742 72.222 0.00 0.00 0.00 4.30
282 2122 4.394712 GCGTGTGTGGAGGGGAGG 62.395 72.222 0.00 0.00 0.00 4.30
283 2123 4.394712 CGTGTGTGGAGGGGAGGC 62.395 72.222 0.00 0.00 0.00 4.70
284 2124 4.394712 GTGTGTGGAGGGGAGGCG 62.395 72.222 0.00 0.00 0.00 5.52
287 2127 4.649705 TGTGGAGGGGAGGCGGAA 62.650 66.667 0.00 0.00 0.00 4.30
288 2128 3.787001 GTGGAGGGGAGGCGGAAG 61.787 72.222 0.00 0.00 0.00 3.46
367 2207 2.529389 AAGGGTTGGCGGGAGAGT 60.529 61.111 0.00 0.00 0.00 3.24
368 2208 1.229400 AAGGGTTGGCGGGAGAGTA 60.229 57.895 0.00 0.00 0.00 2.59
530 3069 4.187694 GGCAACAGATTTTGTCAAAACCA 58.812 39.130 12.86 0.00 39.73 3.67
555 3094 4.382362 GCCCTTTTGATCTGGAAAGATTGG 60.382 45.833 14.36 10.07 35.41 3.16
618 3157 5.163893 GCTCCAAAATTGATGTGCAAAGATG 60.164 40.000 0.00 0.00 40.48 2.90
638 3177 1.450312 CATCCGGTGGAGGCTTGTC 60.450 63.158 0.00 0.00 34.05 3.18
833 3375 2.033602 AGGTTACCGTTGCAGCCC 59.966 61.111 0.00 0.00 0.00 5.19
836 3378 1.677633 GTTACCGTTGCAGCCCCAT 60.678 57.895 0.00 0.00 0.00 4.00
844 3386 4.962836 GCAGCCCCATCCCCATCG 62.963 72.222 0.00 0.00 0.00 3.84
850 3392 2.359107 CCATCCCCATCGCCATCG 60.359 66.667 0.00 0.00 0.00 3.84
851 3393 3.052082 CATCCCCATCGCCATCGC 61.052 66.667 0.00 0.00 35.26 4.58
852 3394 4.335647 ATCCCCATCGCCATCGCC 62.336 66.667 0.00 0.00 35.26 5.54
854 3396 4.648626 CCCCATCGCCATCGCCAT 62.649 66.667 0.00 0.00 35.26 4.40
855 3397 3.052082 CCCATCGCCATCGCCATC 61.052 66.667 0.00 0.00 35.26 3.51
856 3398 3.417224 CCATCGCCATCGCCATCG 61.417 66.667 0.00 0.00 35.26 3.84
978 3520 1.152735 CGGGAGAGGCTAGGCTACA 60.153 63.158 20.27 0.00 0.00 2.74
979 3521 1.175983 CGGGAGAGGCTAGGCTACAG 61.176 65.000 20.27 9.55 0.00 2.74
1772 4346 4.204799 TCTTTCTTGCATCCATGGATCAG 58.795 43.478 24.93 19.07 31.62 2.90
1773 4347 2.651382 TCTTGCATCCATGGATCAGG 57.349 50.000 24.93 22.18 31.62 3.86
2063 4680 5.213891 TCTCACAGCACACAAGATTAGAA 57.786 39.130 0.00 0.00 0.00 2.10
2064 4681 4.991056 TCTCACAGCACACAAGATTAGAAC 59.009 41.667 0.00 0.00 0.00 3.01
2135 6369 1.401552 TCACAACACAGAGCTGTTTGC 59.598 47.619 17.43 0.00 42.83 3.68
2159 6393 6.293190 GCTTGTTTTACTGTAGCACATACACA 60.293 38.462 0.00 0.00 39.52 3.72
2196 6506 6.363167 TGGAAGGCTGATTTGATTTGATTT 57.637 33.333 0.00 0.00 0.00 2.17
2197 6507 6.167685 TGGAAGGCTGATTTGATTTGATTTG 58.832 36.000 0.00 0.00 0.00 2.32
2198 6508 6.014413 TGGAAGGCTGATTTGATTTGATTTGA 60.014 34.615 0.00 0.00 0.00 2.69
2199 6509 7.046033 GGAAGGCTGATTTGATTTGATTTGAT 58.954 34.615 0.00 0.00 0.00 2.57
2201 6511 8.488651 AAGGCTGATTTGATTTGATTTGATTC 57.511 30.769 0.00 0.00 0.00 2.52
2202 6512 7.617225 AGGCTGATTTGATTTGATTTGATTCA 58.383 30.769 0.00 0.00 0.00 2.57
2203 6513 7.764443 AGGCTGATTTGATTTGATTTGATTCAG 59.236 33.333 0.00 0.00 0.00 3.02
2204 6514 7.762615 GGCTGATTTGATTTGATTTGATTCAGA 59.237 33.333 0.00 0.00 0.00 3.27
2205 6515 9.314321 GCTGATTTGATTTGATTTGATTCAGAT 57.686 29.630 0.00 0.00 0.00 2.90
2248 6558 6.205658 ACTTTCAGACTATTTTCCACTTGAGC 59.794 38.462 0.00 0.00 0.00 4.26
2288 6599 5.233225 TCAGCAAACACTCTGAAGTAGATG 58.767 41.667 0.00 0.00 36.50 2.90
2290 6601 4.993584 AGCAAACACTCTGAAGTAGATGTG 59.006 41.667 0.00 0.00 38.94 3.21
2291 6602 4.991056 GCAAACACTCTGAAGTAGATGTGA 59.009 41.667 0.00 0.00 37.67 3.58
2305 6616 6.705302 AGTAGATGTGATCAATCTTGTGTGT 58.295 36.000 19.01 3.73 0.00 3.72
2327 6640 6.946229 GTCAAGAACATGACGTATAACTGT 57.054 37.500 0.00 0.00 40.23 3.55
2331 6644 5.103000 AGAACATGACGTATAACTGTCTGC 58.897 41.667 0.00 0.00 36.10 4.26
2353 6666 4.327087 GCACTTTCAAACTGTTTTCCACTG 59.673 41.667 2.41 0.00 0.00 3.66
2354 6667 5.708948 CACTTTCAAACTGTTTTCCACTGA 58.291 37.500 2.41 0.00 0.00 3.41
2355 6668 5.801947 CACTTTCAAACTGTTTTCCACTGAG 59.198 40.000 2.41 0.00 0.00 3.35
2356 6669 5.476945 ACTTTCAAACTGTTTTCCACTGAGT 59.523 36.000 2.41 0.00 0.00 3.41
2358 6671 7.175990 ACTTTCAAACTGTTTTCCACTGAGTTA 59.824 33.333 2.41 0.00 0.00 2.24
2359 6672 6.677781 TCAAACTGTTTTCCACTGAGTTAG 57.322 37.500 2.41 0.00 0.00 2.34
2360 6673 5.065988 TCAAACTGTTTTCCACTGAGTTAGC 59.934 40.000 2.41 0.00 0.00 3.09
2361 6674 4.423625 ACTGTTTTCCACTGAGTTAGCT 57.576 40.909 0.00 0.00 0.00 3.32
2363 6676 5.925509 ACTGTTTTCCACTGAGTTAGCTTA 58.074 37.500 0.00 0.00 0.00 3.09
2370 6683 6.150396 TCCACTGAGTTAGCTTATAAGAGC 57.850 41.667 16.85 2.23 43.02 4.09
2647 6960 3.008485 GGAACTCAACCATCTTGTCCTCT 59.992 47.826 0.00 0.00 0.00 3.69
2751 7064 3.309296 AGGTGAGACTTCTTCTTCCACA 58.691 45.455 0.00 0.00 32.84 4.17
2752 7065 3.323403 AGGTGAGACTTCTTCTTCCACAG 59.677 47.826 0.00 0.00 32.84 3.66
2753 7066 3.556004 GGTGAGACTTCTTCTTCCACAGG 60.556 52.174 0.00 0.00 32.84 4.00
2755 7068 2.037772 GAGACTTCTTCTTCCACAGGCA 59.962 50.000 0.00 0.00 33.22 4.75
2757 7070 3.840666 AGACTTCTTCTTCCACAGGCATA 59.159 43.478 0.00 0.00 0.00 3.14
2758 7071 4.287067 AGACTTCTTCTTCCACAGGCATAA 59.713 41.667 0.00 0.00 0.00 1.90
2759 7072 4.327680 ACTTCTTCTTCCACAGGCATAAC 58.672 43.478 0.00 0.00 0.00 1.89
2760 7073 4.202461 ACTTCTTCTTCCACAGGCATAACA 60.202 41.667 0.00 0.00 0.00 2.41
2761 7074 4.574674 TCTTCTTCCACAGGCATAACAT 57.425 40.909 0.00 0.00 0.00 2.71
2762 7075 4.517285 TCTTCTTCCACAGGCATAACATC 58.483 43.478 0.00 0.00 0.00 3.06
2763 7076 3.281727 TCTTCCACAGGCATAACATCC 57.718 47.619 0.00 0.00 0.00 3.51
2764 7077 2.092429 TCTTCCACAGGCATAACATCCC 60.092 50.000 0.00 0.00 0.00 3.85
2765 7078 1.595311 TCCACAGGCATAACATCCCT 58.405 50.000 0.00 0.00 0.00 4.20
2768 7081 3.500331 CAGGCATAACATCCCTGCA 57.500 52.632 0.00 0.00 39.64 4.41
2769 7082 1.027357 CAGGCATAACATCCCTGCAC 58.973 55.000 0.00 0.00 39.64 4.57
2770 7083 0.625316 AGGCATAACATCCCTGCACA 59.375 50.000 0.00 0.00 37.64 4.57
2771 7084 1.005805 AGGCATAACATCCCTGCACAA 59.994 47.619 0.00 0.00 37.64 3.33
2772 7085 2.034124 GGCATAACATCCCTGCACAAT 58.966 47.619 0.00 0.00 37.64 2.71
2773 7086 3.117550 AGGCATAACATCCCTGCACAATA 60.118 43.478 0.00 0.00 37.64 1.90
2774 7087 3.636300 GGCATAACATCCCTGCACAATAA 59.364 43.478 0.00 0.00 37.64 1.40
2775 7088 4.281688 GGCATAACATCCCTGCACAATAAT 59.718 41.667 0.00 0.00 37.64 1.28
2776 7089 5.464168 GCATAACATCCCTGCACAATAATC 58.536 41.667 0.00 0.00 35.96 1.75
2777 7090 5.009911 GCATAACATCCCTGCACAATAATCA 59.990 40.000 0.00 0.00 35.96 2.57
2778 7091 6.461370 GCATAACATCCCTGCACAATAATCAA 60.461 38.462 0.00 0.00 35.96 2.57
2779 7092 4.989279 ACATCCCTGCACAATAATCAAC 57.011 40.909 0.00 0.00 0.00 3.18
2780 7093 4.603131 ACATCCCTGCACAATAATCAACT 58.397 39.130 0.00 0.00 0.00 3.16
2781 7094 4.641989 ACATCCCTGCACAATAATCAACTC 59.358 41.667 0.00 0.00 0.00 3.01
2782 7095 4.299586 TCCCTGCACAATAATCAACTCA 57.700 40.909 0.00 0.00 0.00 3.41
2783 7096 4.009675 TCCCTGCACAATAATCAACTCAC 58.990 43.478 0.00 0.00 0.00 3.51
2784 7097 4.012374 CCCTGCACAATAATCAACTCACT 58.988 43.478 0.00 0.00 0.00 3.41
2785 7098 4.460382 CCCTGCACAATAATCAACTCACTT 59.540 41.667 0.00 0.00 0.00 3.16
2786 7099 5.396484 CCTGCACAATAATCAACTCACTTG 58.604 41.667 0.00 0.00 0.00 3.16
2787 7100 4.797471 TGCACAATAATCAACTCACTTGC 58.203 39.130 0.00 0.00 0.00 4.01
2788 7101 3.848019 GCACAATAATCAACTCACTTGCG 59.152 43.478 0.00 0.00 0.00 4.85
2789 7102 3.848019 CACAATAATCAACTCACTTGCGC 59.152 43.478 0.00 0.00 0.00 6.09
2790 7103 3.501828 ACAATAATCAACTCACTTGCGCA 59.498 39.130 5.66 5.66 0.00 6.09
2814 7127 2.341846 TTACAAAGCATCCCGATCCC 57.658 50.000 0.00 0.00 0.00 3.85
2839 7152 6.293190 CGTGTAACACTTGGATTTCTTAAGCA 60.293 38.462 0.00 0.00 35.74 3.91
2850 7163 8.181904 TGGATTTCTTAAGCACTTTCTGAATT 57.818 30.769 0.00 0.00 0.00 2.17
2862 7175 6.361748 GCACTTTCTGAATTTGAGTTGATGAC 59.638 38.462 0.00 0.00 0.00 3.06
2890 7203 0.111253 CTTTCCAGGTCTGTGGGCTT 59.889 55.000 0.00 0.00 38.26 4.35
3094 7407 3.751698 GGTGTATCAAGTTCTGGAACACC 59.248 47.826 14.67 17.26 45.63 4.16
3174 7487 9.884814 ATAGTTCTGGACAAGACCTATATAAGT 57.115 33.333 0.00 0.00 38.49 2.24
3175 7488 8.611051 AGTTCTGGACAAGACCTATATAAGTT 57.389 34.615 0.00 0.00 33.46 2.66
3176 7489 8.697292 AGTTCTGGACAAGACCTATATAAGTTC 58.303 37.037 0.00 0.00 33.46 3.01
3177 7490 8.697292 GTTCTGGACAAGACCTATATAAGTTCT 58.303 37.037 0.00 0.00 33.46 3.01
3178 7491 8.239038 TCTGGACAAGACCTATATAAGTTCTG 57.761 38.462 0.00 0.00 0.00 3.02
3179 7492 7.287927 TCTGGACAAGACCTATATAAGTTCTGG 59.712 40.741 0.00 0.00 0.00 3.86
3180 7493 7.130099 TGGACAAGACCTATATAAGTTCTGGA 58.870 38.462 0.00 0.00 0.00 3.86
3181 7494 7.069578 TGGACAAGACCTATATAAGTTCTGGAC 59.930 40.741 0.00 0.00 0.00 4.02
3182 7495 7.069578 GGACAAGACCTATATAAGTTCTGGACA 59.930 40.741 0.00 0.00 0.00 4.02
3183 7496 8.375493 ACAAGACCTATATAAGTTCTGGACAA 57.625 34.615 0.00 0.00 0.00 3.18
3184 7497 8.478877 ACAAGACCTATATAAGTTCTGGACAAG 58.521 37.037 0.00 0.00 0.00 3.16
3185 7498 8.696374 CAAGACCTATATAAGTTCTGGACAAGA 58.304 37.037 0.00 0.00 0.00 3.02
3186 7499 8.240267 AGACCTATATAAGTTCTGGACAAGAC 57.760 38.462 0.00 0.00 33.46 3.01
3187 7500 7.288158 AGACCTATATAAGTTCTGGACAAGACC 59.712 40.741 0.00 0.00 33.46 3.85
3188 7501 7.133483 ACCTATATAAGTTCTGGACAAGACCT 58.867 38.462 0.00 0.00 33.46 3.85
3189 7502 8.287350 ACCTATATAAGTTCTGGACAAGACCTA 58.713 37.037 0.00 0.00 33.46 3.08
3190 7503 9.315363 CCTATATAAGTTCTGGACAAGACCTAT 57.685 37.037 0.00 0.00 33.46 2.57
3195 7508 5.337788 AGTTCTGGACAAGACCTATCTCTT 58.662 41.667 0.00 0.00 33.46 2.85
3225 7538 9.008965 TGTATGTTGCTCTAAATAAATGTGTGT 57.991 29.630 0.00 0.00 0.00 3.72
3227 7540 8.746922 ATGTTGCTCTAAATAAATGTGTGTTG 57.253 30.769 0.00 0.00 0.00 3.33
3367 7680 7.272978 TCCATCTATGTCAAAGGTAAGCTTAC 58.727 38.462 25.52 25.52 0.00 2.34
3368 7681 6.201044 CCATCTATGTCAAAGGTAAGCTTACG 59.799 42.308 26.17 14.86 34.50 3.18
3369 7682 6.519679 TCTATGTCAAAGGTAAGCTTACGA 57.480 37.500 26.17 16.70 34.50 3.43
3378 7693 4.901868 AGGTAAGCTTACGAATTTGGTGA 58.098 39.130 26.17 0.00 34.50 4.02
3380 7695 5.944007 AGGTAAGCTTACGAATTTGGTGAAT 59.056 36.000 26.17 0.91 34.50 2.57
3387 7702 4.822036 ACGAATTTGGTGAATCGTTCAA 57.178 36.364 0.00 0.00 42.15 2.69
3422 7737 8.974060 ATTTGTAAACTGGTTCACGGATATAT 57.026 30.769 0.00 0.00 0.00 0.86
3431 7746 5.047306 TGGTTCACGGATATATTAGCTGGAG 60.047 44.000 0.00 0.00 0.00 3.86
3435 7750 6.688578 TCACGGATATATTAGCTGGAGAAAC 58.311 40.000 0.00 0.00 0.00 2.78
3436 7751 5.869888 CACGGATATATTAGCTGGAGAAACC 59.130 44.000 0.00 0.00 39.54 3.27
3438 7753 5.187967 CGGATATATTAGCTGGAGAAACCCT 59.812 44.000 0.00 0.00 38.00 4.34
3472 7790 3.882288 TCATTCTGCAAGTTAACTGTGCA 59.118 39.130 28.03 28.03 45.62 4.57
3480 7798 4.913924 GCAAGTTAACTGTGCATTCTCTTG 59.086 41.667 25.06 12.13 38.19 3.02
3491 7809 2.415625 GCATTCTCTTGGCTTGCTTCTG 60.416 50.000 0.00 0.00 0.00 3.02
3496 7815 1.133823 TCTTGGCTTGCTTCTGGACAA 60.134 47.619 0.00 0.00 0.00 3.18
3497 7816 1.000938 CTTGGCTTGCTTCTGGACAAC 60.001 52.381 0.00 0.00 0.00 3.32
3502 7821 2.310538 CTTGCTTCTGGACAACCCTTT 58.689 47.619 0.00 0.00 35.38 3.11
3528 7847 1.470979 CCTGTCGGCGCTATAACAGTT 60.471 52.381 19.86 0.00 37.92 3.16
3529 7848 1.588404 CTGTCGGCGCTATAACAGTTG 59.412 52.381 15.16 0.00 35.51 3.16
3530 7849 0.300789 GTCGGCGCTATAACAGTTGC 59.699 55.000 7.64 0.00 0.00 4.17
3531 7850 0.174845 TCGGCGCTATAACAGTTGCT 59.825 50.000 7.64 0.00 0.00 3.91
3532 7851 1.006832 CGGCGCTATAACAGTTGCTT 58.993 50.000 7.64 0.00 0.00 3.91
3533 7852 1.396996 CGGCGCTATAACAGTTGCTTT 59.603 47.619 7.64 0.00 0.00 3.51
3534 7853 2.605818 CGGCGCTATAACAGTTGCTTTA 59.394 45.455 7.64 0.00 0.00 1.85
3535 7854 3.302480 CGGCGCTATAACAGTTGCTTTAG 60.302 47.826 7.64 0.00 0.00 1.85
3536 7855 3.621715 GGCGCTATAACAGTTGCTTTAGT 59.378 43.478 7.64 0.00 0.00 2.24
3537 7856 4.094442 GGCGCTATAACAGTTGCTTTAGTT 59.906 41.667 7.64 0.00 0.00 2.24
3538 7857 5.292589 GGCGCTATAACAGTTGCTTTAGTTA 59.707 40.000 7.64 0.00 0.00 2.24
3539 7858 6.183324 GCGCTATAACAGTTGCTTTAGTTAC 58.817 40.000 0.00 0.00 30.19 2.50
3540 7859 6.035758 GCGCTATAACAGTTGCTTTAGTTACT 59.964 38.462 0.00 0.00 30.19 2.24
3541 7860 7.391786 CGCTATAACAGTTGCTTTAGTTACTG 58.608 38.462 0.00 0.00 42.75 2.74
3542 7861 7.274904 CGCTATAACAGTTGCTTTAGTTACTGA 59.725 37.037 15.45 0.00 40.24 3.41
3543 7862 8.932791 GCTATAACAGTTGCTTTAGTTACTGAA 58.067 33.333 15.45 0.00 40.24 3.02
3546 7865 6.002062 ACAGTTGCTTTAGTTACTGAATGC 57.998 37.500 15.45 0.28 40.24 3.56
3547 7866 5.765182 ACAGTTGCTTTAGTTACTGAATGCT 59.235 36.000 15.45 0.00 40.24 3.79
3548 7867 6.263168 ACAGTTGCTTTAGTTACTGAATGCTT 59.737 34.615 15.45 0.00 40.24 3.91
3549 7868 6.798959 CAGTTGCTTTAGTTACTGAATGCTTC 59.201 38.462 0.00 0.00 40.24 3.86
3550 7869 6.486657 AGTTGCTTTAGTTACTGAATGCTTCA 59.513 34.615 0.00 0.00 38.17 3.02
3551 7870 6.875948 TGCTTTAGTTACTGAATGCTTCAA 57.124 33.333 0.00 0.00 39.58 2.69
3552 7871 7.270757 TGCTTTAGTTACTGAATGCTTCAAA 57.729 32.000 0.00 0.00 39.58 2.69
3553 7872 7.138736 TGCTTTAGTTACTGAATGCTTCAAAC 58.861 34.615 0.00 3.84 39.58 2.93
3554 7873 7.013274 TGCTTTAGTTACTGAATGCTTCAAACT 59.987 33.333 14.66 14.66 41.27 2.66
3555 7874 7.862873 GCTTTAGTTACTGAATGCTTCAAACTT 59.137 33.333 15.12 6.26 39.85 2.66
3556 7875 9.736023 CTTTAGTTACTGAATGCTTCAAACTTT 57.264 29.630 15.12 3.22 39.85 2.66
3581 7900 9.944376 TTTTTAATCTGTCAGAGCTATAACAGT 57.056 29.630 11.37 0.00 40.01 3.55
3652 7971 7.555965 TCATGCTGAGCTTACTTTTGATACTA 58.444 34.615 5.83 0.00 0.00 1.82
3703 8022 4.309933 TCAGTGCACTACTTCAATGACAG 58.690 43.478 21.20 2.06 37.60 3.51
3963 8282 1.032114 AATGAAAGCGCAGGTAGGCC 61.032 55.000 11.47 0.00 37.06 5.19
3974 8293 1.208293 CAGGTAGGCCTCCTTGAAGAC 59.792 57.143 9.68 0.00 44.97 3.01
3976 8295 0.542333 GTAGGCCTCCTTGAAGACCC 59.458 60.000 9.68 0.00 34.61 4.46
3998 8349 2.417107 GGAATCATTTCAATGCGTGCCA 60.417 45.455 0.00 0.00 36.36 4.92
3999 8350 3.450578 GAATCATTTCAATGCGTGCCAT 58.549 40.909 0.00 0.00 36.36 4.40
4003 8354 3.432592 TCATTTCAATGCGTGCCATTTTG 59.567 39.130 0.00 0.00 42.15 2.44
4004 8355 2.522836 TTCAATGCGTGCCATTTTGT 57.477 40.000 0.00 0.00 42.15 2.83
4007 8358 2.543012 TCAATGCGTGCCATTTTGTTTG 59.457 40.909 0.00 0.00 42.15 2.93
4008 8359 2.237393 ATGCGTGCCATTTTGTTTGT 57.763 40.000 0.00 0.00 0.00 2.83
4027 8378 9.495572 TTGTTTGTTTTAGAACATGAACCTTTT 57.504 25.926 0.00 0.00 44.71 2.27
4038 8389 9.057089 AGAACATGAACCTTTTAACTACTTCTG 57.943 33.333 0.00 0.00 0.00 3.02
4107 8458 3.030291 TGCTGGGCTCTTTTCTTTTTCA 58.970 40.909 0.00 0.00 0.00 2.69
4140 8491 1.216710 GTGAGAAGTCGCAGAGGGG 59.783 63.158 0.00 0.00 36.95 4.79
4189 8540 5.119931 TGTGACTGTGCCAAACATATTTC 57.880 39.130 0.00 0.00 38.39 2.17
4190 8541 4.826733 TGTGACTGTGCCAAACATATTTCT 59.173 37.500 0.00 0.00 38.39 2.52
4306 8657 8.029522 TGTAGTAGAAACTCATAAACTCTGCAG 58.970 37.037 7.63 7.63 37.15 4.41
4307 8658 5.872070 AGTAGAAACTCATAAACTCTGCAGC 59.128 40.000 9.47 0.00 0.00 5.25
4326 8677 3.802139 CAGCTGTAAGTCTTGTTCGACAA 59.198 43.478 5.25 0.00 36.38 3.18
4549 8900 4.289672 TCCTCTGCTTTGGATTTAGGTTCT 59.710 41.667 0.00 0.00 0.00 3.01
4550 8901 5.487488 TCCTCTGCTTTGGATTTAGGTTCTA 59.513 40.000 0.00 0.00 0.00 2.10
4551 8902 5.586643 CCTCTGCTTTGGATTTAGGTTCTAC 59.413 44.000 0.00 0.00 0.00 2.59
4552 8903 6.374417 TCTGCTTTGGATTTAGGTTCTACT 57.626 37.500 0.00 0.00 0.00 2.57
4553 8904 6.407202 TCTGCTTTGGATTTAGGTTCTACTC 58.593 40.000 0.00 0.00 0.00 2.59
4554 8905 5.497474 TGCTTTGGATTTAGGTTCTACTCC 58.503 41.667 0.00 0.00 0.00 3.85
4555 8906 4.882427 GCTTTGGATTTAGGTTCTACTCCC 59.118 45.833 0.00 0.00 0.00 4.30
4556 8907 5.339282 GCTTTGGATTTAGGTTCTACTCCCT 60.339 44.000 0.00 0.00 34.74 4.20
4557 8908 5.952347 TTGGATTTAGGTTCTACTCCCTC 57.048 43.478 0.00 0.00 32.08 4.30
4558 8909 4.296056 TGGATTTAGGTTCTACTCCCTCC 58.704 47.826 0.00 0.00 32.08 4.30
4559 8910 3.321396 GGATTTAGGTTCTACTCCCTCCG 59.679 52.174 0.00 0.00 32.08 4.63
4560 8911 3.463048 TTTAGGTTCTACTCCCTCCGT 57.537 47.619 0.00 0.00 32.08 4.69
4561 8912 3.463048 TTAGGTTCTACTCCCTCCGTT 57.537 47.619 0.00 0.00 32.08 4.44
4562 8913 1.849977 AGGTTCTACTCCCTCCGTTC 58.150 55.000 0.00 0.00 0.00 3.95
4563 8914 0.822811 GGTTCTACTCCCTCCGTTCC 59.177 60.000 0.00 0.00 0.00 3.62
4564 8915 1.553706 GTTCTACTCCCTCCGTTCCA 58.446 55.000 0.00 0.00 0.00 3.53
4565 8916 1.897802 GTTCTACTCCCTCCGTTCCAA 59.102 52.381 0.00 0.00 0.00 3.53
4566 8917 2.301009 GTTCTACTCCCTCCGTTCCAAA 59.699 50.000 0.00 0.00 0.00 3.28
4567 8918 2.612000 TCTACTCCCTCCGTTCCAAAA 58.388 47.619 0.00 0.00 0.00 2.44
4568 8919 3.178865 TCTACTCCCTCCGTTCCAAAAT 58.821 45.455 0.00 0.00 0.00 1.82
4569 8920 4.355549 TCTACTCCCTCCGTTCCAAAATA 58.644 43.478 0.00 0.00 0.00 1.40
4570 8921 3.345508 ACTCCCTCCGTTCCAAAATAC 57.654 47.619 0.00 0.00 0.00 1.89
4571 8922 2.910977 ACTCCCTCCGTTCCAAAATACT 59.089 45.455 0.00 0.00 0.00 2.12
4572 8923 3.055312 ACTCCCTCCGTTCCAAAATACTC 60.055 47.826 0.00 0.00 0.00 2.59
4573 8924 2.237893 TCCCTCCGTTCCAAAATACTCC 59.762 50.000 0.00 0.00 0.00 3.85
4574 8925 2.640184 CCTCCGTTCCAAAATACTCCC 58.360 52.381 0.00 0.00 0.00 4.30
4575 8926 2.238898 CCTCCGTTCCAAAATACTCCCT 59.761 50.000 0.00 0.00 0.00 4.20
4576 8927 3.532542 CTCCGTTCCAAAATACTCCCTC 58.467 50.000 0.00 0.00 0.00 4.30
4577 8928 2.237893 TCCGTTCCAAAATACTCCCTCC 59.762 50.000 0.00 0.00 0.00 4.30
4578 8929 2.277084 CGTTCCAAAATACTCCCTCCG 58.723 52.381 0.00 0.00 0.00 4.63
4579 8930 2.354403 CGTTCCAAAATACTCCCTCCGT 60.354 50.000 0.00 0.00 0.00 4.69
4580 8931 3.268330 GTTCCAAAATACTCCCTCCGTC 58.732 50.000 0.00 0.00 0.00 4.79
4581 8932 1.835531 TCCAAAATACTCCCTCCGTCC 59.164 52.381 0.00 0.00 0.00 4.79
4582 8933 1.557832 CCAAAATACTCCCTCCGTCCA 59.442 52.381 0.00 0.00 0.00 4.02
4583 8934 2.420129 CCAAAATACTCCCTCCGTCCAG 60.420 54.545 0.00 0.00 0.00 3.86
4584 8935 2.500098 CAAAATACTCCCTCCGTCCAGA 59.500 50.000 0.00 0.00 0.00 3.86
4585 8936 2.544844 AATACTCCCTCCGTCCAGAA 57.455 50.000 0.00 0.00 0.00 3.02
4586 8937 2.544844 ATACTCCCTCCGTCCAGAAA 57.455 50.000 0.00 0.00 0.00 2.52
4587 8938 2.544844 TACTCCCTCCGTCCAGAAAT 57.455 50.000 0.00 0.00 0.00 2.17
4588 8939 2.544844 ACTCCCTCCGTCCAGAAATA 57.455 50.000 0.00 0.00 0.00 1.40
4589 8940 2.108970 ACTCCCTCCGTCCAGAAATAC 58.891 52.381 0.00 0.00 0.00 1.89
4590 8941 2.292323 ACTCCCTCCGTCCAGAAATACT 60.292 50.000 0.00 0.00 0.00 2.12
4591 8942 2.766828 CTCCCTCCGTCCAGAAATACTT 59.233 50.000 0.00 0.00 0.00 2.24
4592 8943 2.500098 TCCCTCCGTCCAGAAATACTTG 59.500 50.000 0.00 0.00 0.00 3.16
4593 8944 2.236395 CCCTCCGTCCAGAAATACTTGT 59.764 50.000 0.00 0.00 0.00 3.16
4594 8945 3.522553 CCTCCGTCCAGAAATACTTGTC 58.477 50.000 0.00 0.00 0.00 3.18
4595 8946 3.056107 CCTCCGTCCAGAAATACTTGTCA 60.056 47.826 0.00 0.00 0.00 3.58
4596 8947 4.383118 CCTCCGTCCAGAAATACTTGTCAT 60.383 45.833 0.00 0.00 0.00 3.06
4597 8948 4.755411 TCCGTCCAGAAATACTTGTCATC 58.245 43.478 0.00 0.00 0.00 2.92
4598 8949 4.221924 TCCGTCCAGAAATACTTGTCATCA 59.778 41.667 0.00 0.00 0.00 3.07
4599 8950 4.935205 CCGTCCAGAAATACTTGTCATCAA 59.065 41.667 0.00 0.00 0.00 2.57
4600 8951 5.411361 CCGTCCAGAAATACTTGTCATCAAA 59.589 40.000 0.00 0.00 32.87 2.69
4601 8952 6.072728 CCGTCCAGAAATACTTGTCATCAAAA 60.073 38.462 0.00 0.00 32.87 2.44
4602 8953 7.362056 CCGTCCAGAAATACTTGTCATCAAAAT 60.362 37.037 0.00 0.00 32.87 1.82
4603 8954 7.482743 CGTCCAGAAATACTTGTCATCAAAATG 59.517 37.037 0.00 0.00 32.87 2.32
4604 8955 7.756722 GTCCAGAAATACTTGTCATCAAAATGG 59.243 37.037 0.00 0.00 33.42 3.16
4605 8956 7.669304 TCCAGAAATACTTGTCATCAAAATGGA 59.331 33.333 0.00 0.00 33.42 3.41
4606 8957 8.472413 CCAGAAATACTTGTCATCAAAATGGAT 58.528 33.333 0.00 0.00 33.42 3.41
4613 8964 7.614494 ACTTGTCATCAAAATGGATAAAAGGG 58.386 34.615 0.00 0.00 33.42 3.95
4614 8965 6.543430 TGTCATCAAAATGGATAAAAGGGG 57.457 37.500 0.00 0.00 33.42 4.79
4615 8966 6.259893 TGTCATCAAAATGGATAAAAGGGGA 58.740 36.000 0.00 0.00 33.42 4.81
4616 8967 6.902416 TGTCATCAAAATGGATAAAAGGGGAT 59.098 34.615 0.00 0.00 33.42 3.85
4617 8968 7.147689 TGTCATCAAAATGGATAAAAGGGGATG 60.148 37.037 0.00 0.00 33.42 3.51
4618 8969 6.327104 TCATCAAAATGGATAAAAGGGGATGG 59.673 38.462 0.00 0.00 33.42 3.51
4619 8970 5.848004 TCAAAATGGATAAAAGGGGATGGA 58.152 37.500 0.00 0.00 0.00 3.41
4620 8971 6.451714 TCAAAATGGATAAAAGGGGATGGAT 58.548 36.000 0.00 0.00 0.00 3.41
4621 8972 6.554605 TCAAAATGGATAAAAGGGGATGGATC 59.445 38.462 0.00 0.00 0.00 3.36
4622 8973 5.955850 AATGGATAAAAGGGGATGGATCT 57.044 39.130 0.00 0.00 0.00 2.75
4623 8974 7.420624 AAATGGATAAAAGGGGATGGATCTA 57.579 36.000 0.00 0.00 0.00 1.98
4624 8975 6.649041 ATGGATAAAAGGGGATGGATCTAG 57.351 41.667 0.00 0.00 0.00 2.43
4625 8976 5.737318 TGGATAAAAGGGGATGGATCTAGA 58.263 41.667 0.00 0.00 0.00 2.43
4626 8977 6.342520 TGGATAAAAGGGGATGGATCTAGAT 58.657 40.000 4.47 4.47 0.00 1.98
4627 8978 6.216251 TGGATAAAAGGGGATGGATCTAGATG 59.784 42.308 10.74 0.00 0.00 2.90
4628 8979 6.216456 GGATAAAAGGGGATGGATCTAGATGT 59.784 42.308 10.74 0.00 0.00 3.06
4629 8980 7.403231 GGATAAAAGGGGATGGATCTAGATGTA 59.597 40.741 10.74 0.00 0.00 2.29
4630 8981 8.940012 ATAAAAGGGGATGGATCTAGATGTAT 57.060 34.615 10.74 3.97 0.00 2.29
4631 8982 7.654287 AAAAGGGGATGGATCTAGATGTATT 57.346 36.000 10.74 0.00 0.00 1.89
4632 8983 7.654287 AAAGGGGATGGATCTAGATGTATTT 57.346 36.000 10.74 0.00 0.00 1.40
4633 8984 7.654287 AAGGGGATGGATCTAGATGTATTTT 57.346 36.000 10.74 0.00 0.00 1.82
4634 8985 8.757307 AAGGGGATGGATCTAGATGTATTTTA 57.243 34.615 10.74 0.00 0.00 1.52
4635 8986 8.386012 AGGGGATGGATCTAGATGTATTTTAG 57.614 38.462 10.74 0.00 0.00 1.85
4636 8987 7.964293 AGGGGATGGATCTAGATGTATTTTAGT 59.036 37.037 10.74 0.00 0.00 2.24
4637 8988 8.606830 GGGGATGGATCTAGATGTATTTTAGTT 58.393 37.037 10.74 0.00 0.00 2.24
4638 8989 9.660180 GGGATGGATCTAGATGTATTTTAGTTC 57.340 37.037 10.74 0.00 0.00 3.01
4683 9034 9.527157 TCTATTTTGATGACAAGTATTTTGGGA 57.473 29.630 0.00 0.00 37.32 4.37
4684 9035 9.573133 CTATTTTGATGACAAGTATTTTGGGAC 57.427 33.333 0.00 0.00 37.32 4.46
4685 9036 5.621197 TTGATGACAAGTATTTTGGGACG 57.379 39.130 0.00 0.00 0.00 4.79
4686 9037 4.006989 TGATGACAAGTATTTTGGGACGG 58.993 43.478 0.00 0.00 0.00 4.79
4687 9038 3.773418 TGACAAGTATTTTGGGACGGA 57.227 42.857 0.00 0.00 0.00 4.69
4688 9039 3.670625 TGACAAGTATTTTGGGACGGAG 58.329 45.455 0.00 0.00 0.00 4.63
4689 9040 3.007635 GACAAGTATTTTGGGACGGAGG 58.992 50.000 0.00 0.00 0.00 4.30
4690 9041 2.290705 ACAAGTATTTTGGGACGGAGGG 60.291 50.000 0.00 0.00 0.00 4.30
4691 9042 1.961133 AGTATTTTGGGACGGAGGGA 58.039 50.000 0.00 0.00 0.00 4.20
4692 9043 1.838077 AGTATTTTGGGACGGAGGGAG 59.162 52.381 0.00 0.00 0.00 4.30
4693 9044 1.558294 GTATTTTGGGACGGAGGGAGT 59.442 52.381 0.00 0.00 0.00 3.85
4694 9045 1.961133 ATTTTGGGACGGAGGGAGTA 58.039 50.000 0.00 0.00 0.00 2.59
4695 9046 1.732117 TTTTGGGACGGAGGGAGTAA 58.268 50.000 0.00 0.00 0.00 2.24
4696 9047 1.732117 TTTGGGACGGAGGGAGTAAA 58.268 50.000 0.00 0.00 0.00 2.01
4697 9048 1.961133 TTGGGACGGAGGGAGTAAAT 58.039 50.000 0.00 0.00 0.00 1.40
4698 9049 1.200519 TGGGACGGAGGGAGTAAATG 58.799 55.000 0.00 0.00 0.00 2.32
4699 9050 1.273381 TGGGACGGAGGGAGTAAATGA 60.273 52.381 0.00 0.00 0.00 2.57
4700 9051 2.047830 GGGACGGAGGGAGTAAATGAT 58.952 52.381 0.00 0.00 0.00 2.45
4701 9052 3.236896 GGGACGGAGGGAGTAAATGATA 58.763 50.000 0.00 0.00 0.00 2.15
4702 9053 3.258622 GGGACGGAGGGAGTAAATGATAG 59.741 52.174 0.00 0.00 0.00 2.08
4703 9054 3.896272 GGACGGAGGGAGTAAATGATAGT 59.104 47.826 0.00 0.00 0.00 2.12
4704 9055 5.075493 GGACGGAGGGAGTAAATGATAGTA 58.925 45.833 0.00 0.00 0.00 1.82
4705 9056 5.048154 GGACGGAGGGAGTAAATGATAGTAC 60.048 48.000 0.00 0.00 0.00 2.73
4706 9057 5.452255 ACGGAGGGAGTAAATGATAGTACA 58.548 41.667 0.00 0.00 0.00 2.90
4707 9058 5.895534 ACGGAGGGAGTAAATGATAGTACAA 59.104 40.000 0.00 0.00 0.00 2.41
4708 9059 6.381994 ACGGAGGGAGTAAATGATAGTACAAA 59.618 38.462 0.00 0.00 0.00 2.83
4709 9060 6.924060 CGGAGGGAGTAAATGATAGTACAAAG 59.076 42.308 0.00 0.00 0.00 2.77
4710 9061 7.417570 CGGAGGGAGTAAATGATAGTACAAAGT 60.418 40.741 0.00 0.00 0.00 2.66
4711 9062 8.265764 GGAGGGAGTAAATGATAGTACAAAGTT 58.734 37.037 0.00 0.00 0.00 2.66
4712 9063 9.099454 GAGGGAGTAAATGATAGTACAAAGTTG 57.901 37.037 0.00 0.00 0.00 3.16
4713 9064 8.047310 AGGGAGTAAATGATAGTACAAAGTTGG 58.953 37.037 0.00 0.00 0.00 3.77
4714 9065 7.282450 GGGAGTAAATGATAGTACAAAGTTGGG 59.718 40.741 0.00 0.00 0.00 4.12
4715 9066 7.827729 GGAGTAAATGATAGTACAAAGTTGGGT 59.172 37.037 0.00 0.00 0.00 4.51
4716 9067 8.788325 AGTAAATGATAGTACAAAGTTGGGTC 57.212 34.615 0.00 0.00 0.00 4.46
4717 9068 8.380099 AGTAAATGATAGTACAAAGTTGGGTCA 58.620 33.333 0.00 0.00 0.00 4.02
4718 9069 9.174166 GTAAATGATAGTACAAAGTTGGGTCAT 57.826 33.333 0.00 0.00 0.00 3.06
4719 9070 7.865706 AATGATAGTACAAAGTTGGGTCATC 57.134 36.000 0.00 0.00 0.00 2.92
4720 9071 6.620877 TGATAGTACAAAGTTGGGTCATCT 57.379 37.500 0.00 0.00 0.00 2.90
4721 9072 7.727578 TGATAGTACAAAGTTGGGTCATCTA 57.272 36.000 0.00 0.00 0.00 1.98
4722 9073 8.319057 TGATAGTACAAAGTTGGGTCATCTAT 57.681 34.615 0.00 0.00 0.00 1.98
4723 9074 8.768397 TGATAGTACAAAGTTGGGTCATCTATT 58.232 33.333 0.00 0.00 0.00 1.73
4724 9075 9.614792 GATAGTACAAAGTTGGGTCATCTATTT 57.385 33.333 0.00 0.00 0.00 1.40
4725 9076 9.975218 ATAGTACAAAGTTGGGTCATCTATTTT 57.025 29.630 0.00 0.00 0.00 1.82
4726 9077 8.110860 AGTACAAAGTTGGGTCATCTATTTTG 57.889 34.615 0.00 0.00 0.00 2.44
4727 9078 6.345096 ACAAAGTTGGGTCATCTATTTTGG 57.655 37.500 0.00 0.00 0.00 3.28
4728 9079 6.074648 ACAAAGTTGGGTCATCTATTTTGGA 58.925 36.000 0.00 0.00 0.00 3.53
4729 9080 6.553100 ACAAAGTTGGGTCATCTATTTTGGAA 59.447 34.615 0.00 0.00 0.00 3.53
4730 9081 6.590234 AAGTTGGGTCATCTATTTTGGAAC 57.410 37.500 0.00 0.00 0.00 3.62
4731 9082 4.700213 AGTTGGGTCATCTATTTTGGAACG 59.300 41.667 0.00 0.00 0.00 3.95
4732 9083 3.616219 TGGGTCATCTATTTTGGAACGG 58.384 45.455 0.00 0.00 0.00 4.44
4733 9084 3.264706 TGGGTCATCTATTTTGGAACGGA 59.735 43.478 0.00 0.00 0.00 4.69
4734 9085 3.877508 GGGTCATCTATTTTGGAACGGAG 59.122 47.826 0.00 0.00 0.00 4.63
4735 9086 3.877508 GGTCATCTATTTTGGAACGGAGG 59.122 47.826 0.00 0.00 0.00 4.30
4736 9087 3.877508 GTCATCTATTTTGGAACGGAGGG 59.122 47.826 0.00 0.00 0.00 4.30
4737 9088 3.778075 TCATCTATTTTGGAACGGAGGGA 59.222 43.478 0.00 0.00 0.00 4.20
4738 9089 3.906720 TCTATTTTGGAACGGAGGGAG 57.093 47.619 0.00 0.00 0.00 4.30
4889 9286 8.611257 TCAAGATAGACTTCCAGGGAAAAATTA 58.389 33.333 1.90 0.00 36.61 1.40
4892 9289 5.600669 AGACTTCCAGGGAAAAATTACCT 57.399 39.130 1.90 0.00 33.34 3.08
4893 9290 6.713731 AGACTTCCAGGGAAAAATTACCTA 57.286 37.500 1.90 0.00 33.34 3.08
4898 9318 4.357399 TCCAGGGAAAAATTACCTACCCAA 59.643 41.667 0.00 0.00 39.73 4.12
4963 9383 5.011586 ACAAGTAGTCTTACTGAGTCCCTC 58.988 45.833 0.00 0.00 40.02 4.30
5066 9486 3.304928 GCTTGTTCATTCCTGACACAAGG 60.305 47.826 19.85 0.00 42.70 3.61
5101 9521 5.016051 TCGGATCTTCTTTCCAGATCAAG 57.984 43.478 11.14 5.61 45.99 3.02
5124 9544 4.137543 AGGGCTAAGAAGTTGTGACAAAG 58.862 43.478 0.00 0.00 0.00 2.77
5125 9545 3.304726 GGGCTAAGAAGTTGTGACAAAGC 60.305 47.826 0.00 4.14 0.00 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 3.790089 TGATATCTCTAGGCGGAGACA 57.210 47.619 13.62 4.96 43.89 3.41
2 3 6.376018 AGTTAATGATATCTCTAGGCGGAGAC 59.624 42.308 13.62 4.68 43.89 3.36
3 4 6.375736 CAGTTAATGATATCTCTAGGCGGAGA 59.624 42.308 13.69 13.69 44.96 3.71
7 8 6.096036 CACCAGTTAATGATATCTCTAGGCG 58.904 44.000 3.98 0.00 0.00 5.52
8 9 6.998802 ACACCAGTTAATGATATCTCTAGGC 58.001 40.000 3.98 0.00 0.00 3.93
9 10 9.078990 TGTACACCAGTTAATGATATCTCTAGG 57.921 37.037 3.98 0.21 0.00 3.02
57 1876 4.776322 TGTCTTCGCCATGCCCGG 62.776 66.667 0.00 0.00 0.00 5.73
78 1897 8.798402 ACGATAAATTTACTCCCAAACATTCAA 58.202 29.630 0.00 0.00 0.00 2.69
81 1900 9.990360 AAAACGATAAATTTACTCCCAAACATT 57.010 25.926 0.00 0.00 0.00 2.71
83 1902 8.083462 GGAAAACGATAAATTTACTCCCAAACA 58.917 33.333 0.00 0.00 0.00 2.83
145 1964 9.458374 CGTTTGAGTACACTTTCCAAAAATAAT 57.542 29.630 0.00 0.00 0.00 1.28
159 1978 5.107220 CCTTATGTTGGTCGTTTGAGTACAC 60.107 44.000 0.00 0.00 0.00 2.90
161 1980 5.232463 TCCTTATGTTGGTCGTTTGAGTAC 58.768 41.667 0.00 0.00 0.00 2.73
201 2020 3.196254 ACGGTATCGGACACCTTTGTATT 59.804 43.478 3.63 0.00 41.39 1.89
202 2021 2.762327 ACGGTATCGGACACCTTTGTAT 59.238 45.455 3.63 0.00 41.39 2.29
211 2030 3.305131 GCATGATCTAACGGTATCGGACA 60.305 47.826 0.00 0.00 41.39 4.02
248 2067 2.579201 CGACGCCCAGACTTCCAT 59.421 61.111 0.00 0.00 0.00 3.41
249 2068 4.373116 GCGACGCCCAGACTTCCA 62.373 66.667 9.14 0.00 0.00 3.53
270 2089 4.649705 TTCCGCCTCCCCTCCACA 62.650 66.667 0.00 0.00 0.00 4.17
467 3006 1.441738 AATTTGAAAATGGCCTGCGC 58.558 45.000 3.32 0.00 0.00 6.09
470 3009 5.296283 TGTTGTGAAATTTGAAAATGGCCTG 59.704 36.000 3.32 0.00 0.00 4.85
472 3011 5.747951 TGTTGTGAAATTTGAAAATGGCC 57.252 34.783 0.00 0.00 0.00 5.36
530 3069 4.118168 TCTTTCCAGATCAAAAGGGCTT 57.882 40.909 12.52 0.00 34.08 4.35
575 3114 2.003301 GCGATCTTGTCTTCCTTCCAC 58.997 52.381 0.00 0.00 0.00 4.02
618 3157 4.115199 AAGCCTCCACCGGATGCC 62.115 66.667 9.46 0.00 42.88 4.40
744 3286 9.350951 GTATTATACCTGGCCTTTTTCTAATGT 57.649 33.333 3.32 0.00 0.00 2.71
804 3346 2.533232 TAACCTGGGGGTGGGGTG 60.533 66.667 0.00 0.00 46.67 4.61
805 3347 2.533492 GTAACCTGGGGGTGGGGT 60.533 66.667 0.00 0.00 46.67 4.95
806 3348 3.344176 GGTAACCTGGGGGTGGGG 61.344 72.222 0.00 0.00 46.67 4.96
807 3349 3.723922 CGGTAACCTGGGGGTGGG 61.724 72.222 0.00 0.00 46.67 4.61
808 3350 2.531601 AACGGTAACCTGGGGGTGG 61.532 63.158 0.00 0.00 46.67 4.61
809 3351 1.302993 CAACGGTAACCTGGGGGTG 60.303 63.158 0.00 0.00 46.67 4.61
811 3353 2.360726 GCAACGGTAACCTGGGGG 60.361 66.667 0.00 0.00 38.88 5.40
833 3375 2.359107 CGATGGCGATGGGGATGG 60.359 66.667 0.00 0.00 40.82 3.51
844 3386 3.730761 GATGGCGATGGCGATGGC 61.731 66.667 7.17 7.17 37.76 4.40
852 3394 4.889856 TCGGTGGCGATGGCGATG 62.890 66.667 0.00 0.00 41.24 3.84
853 3395 3.865929 GATCGGTGGCGATGGCGAT 62.866 63.158 0.00 0.00 41.24 4.58
854 3396 4.585526 GATCGGTGGCGATGGCGA 62.586 66.667 0.00 0.00 41.24 5.54
855 3397 4.592192 AGATCGGTGGCGATGGCG 62.592 66.667 0.00 0.00 41.24 5.69
856 3398 2.663188 GAGATCGGTGGCGATGGC 60.663 66.667 0.00 0.00 38.90 4.40
1215 3769 1.376037 GAAGTTGTGGAGGCGGGAG 60.376 63.158 0.00 0.00 0.00 4.30
1772 4346 2.113860 TAGCAATCTGACTTGTGCCC 57.886 50.000 0.00 0.00 37.73 5.36
1773 4347 3.181493 CCATTAGCAATCTGACTTGTGCC 60.181 47.826 0.00 0.00 37.73 5.01
1811 4387 1.364626 CCAGATCGCACAGCTTGGTC 61.365 60.000 0.00 0.00 0.00 4.02
2114 6344 2.792542 GCAAACAGCTCTGTGTTGTGAC 60.793 50.000 17.55 6.29 44.13 3.67
2135 6369 7.184800 TGTGTATGTGCTACAGTAAAACAAG 57.815 36.000 0.30 0.00 40.99 3.16
2149 6383 7.330454 CCATACTGATCTTAGATGTGTATGTGC 59.670 40.741 25.08 4.91 36.04 4.57
2159 6393 6.080682 TCAGCCTTCCATACTGATCTTAGAT 58.919 40.000 0.00 0.00 35.58 1.98
2196 6506 5.421374 AGACAGAGATGTCACATCTGAATCA 59.579 40.000 25.48 0.00 42.48 2.57
2197 6507 5.749588 CAGACAGAGATGTCACATCTGAATC 59.250 44.000 25.48 17.11 42.48 2.52
2198 6508 5.662456 CAGACAGAGATGTCACATCTGAAT 58.338 41.667 25.48 9.36 42.48 2.57
2199 6509 4.620097 GCAGACAGAGATGTCACATCTGAA 60.620 45.833 25.48 0.00 42.48 3.02
2201 6511 3.188492 GCAGACAGAGATGTCACATCTG 58.812 50.000 25.48 15.51 44.81 2.90
2202 6512 2.830321 TGCAGACAGAGATGTCACATCT 59.170 45.455 20.78 20.78 41.02 2.90
2203 6513 2.928757 GTGCAGACAGAGATGTCACATC 59.071 50.000 10.05 10.05 41.02 3.06
2204 6514 2.566279 AGTGCAGACAGAGATGTCACAT 59.434 45.455 10.72 0.00 41.02 3.21
2205 6515 1.966354 AGTGCAGACAGAGATGTCACA 59.034 47.619 10.72 5.75 41.02 3.58
2206 6516 2.739885 AGTGCAGACAGAGATGTCAC 57.260 50.000 10.72 3.40 41.02 3.67
2248 6558 5.173774 TGCTGAAACTCTTAAGCAACTTG 57.826 39.130 0.00 0.00 42.42 3.16
2253 6563 4.640201 AGTGTTTGCTGAAACTCTTAAGCA 59.360 37.500 0.00 0.00 41.11 3.91
2258 6569 4.517285 TCAGAGTGTTTGCTGAAACTCTT 58.483 39.130 9.25 0.00 45.45 2.85
2273 6584 7.490840 AGATTGATCACATCTACTTCAGAGTG 58.509 38.462 14.80 0.00 36.48 3.51
2305 6616 6.806739 CAGACAGTTATACGTCATGTTCTTGA 59.193 38.462 0.00 0.00 34.48 3.02
2309 6620 4.862574 TGCAGACAGTTATACGTCATGTTC 59.137 41.667 0.00 0.00 34.48 3.18
2316 6629 4.878439 TGAAAGTGCAGACAGTTATACGT 58.122 39.130 0.00 0.00 38.53 3.57
2318 6631 7.072030 CAGTTTGAAAGTGCAGACAGTTATAC 58.928 38.462 0.00 0.00 38.53 1.47
2323 6636 3.347216 ACAGTTTGAAAGTGCAGACAGT 58.653 40.909 12.39 0.00 35.18 3.55
2327 6640 4.219507 TGGAAAACAGTTTGAAAGTGCAGA 59.780 37.500 12.39 0.00 35.18 4.26
2331 6644 5.708948 TCAGTGGAAAACAGTTTGAAAGTG 58.291 37.500 11.00 11.00 37.83 3.16
2359 6672 5.123027 AGTGTTTGCTGAAGCTCTTATAAGC 59.877 40.000 7.67 0.00 42.66 3.09
2360 6673 6.593382 AGAGTGTTTGCTGAAGCTCTTATAAG 59.407 38.462 6.11 6.11 42.66 1.73
2361 6674 6.369890 CAGAGTGTTTGCTGAAGCTCTTATAA 59.630 38.462 3.61 0.00 42.66 0.98
2363 6676 4.694509 CAGAGTGTTTGCTGAAGCTCTTAT 59.305 41.667 3.61 0.00 42.66 1.73
2380 6693 9.814899 AAGATTGATTACATCTACTTCAGAGTG 57.185 33.333 0.00 0.00 36.48 3.51
2647 6960 1.228245 GTTCTTGTCCCTGCTGCCA 60.228 57.895 0.00 0.00 0.00 4.92
2752 7065 1.473258 TTGTGCAGGGATGTTATGCC 58.527 50.000 0.00 0.00 41.75 4.40
2753 7066 4.916983 TTATTGTGCAGGGATGTTATGC 57.083 40.909 0.00 0.00 40.40 3.14
2755 7068 6.835488 AGTTGATTATTGTGCAGGGATGTTAT 59.165 34.615 0.00 0.00 0.00 1.89
2757 7070 5.018809 AGTTGATTATTGTGCAGGGATGTT 58.981 37.500 0.00 0.00 0.00 2.71
2758 7071 4.603131 AGTTGATTATTGTGCAGGGATGT 58.397 39.130 0.00 0.00 0.00 3.06
2759 7072 4.641541 TGAGTTGATTATTGTGCAGGGATG 59.358 41.667 0.00 0.00 0.00 3.51
2760 7073 4.641989 GTGAGTTGATTATTGTGCAGGGAT 59.358 41.667 0.00 0.00 0.00 3.85
2761 7074 4.009675 GTGAGTTGATTATTGTGCAGGGA 58.990 43.478 0.00 0.00 0.00 4.20
2762 7075 4.012374 AGTGAGTTGATTATTGTGCAGGG 58.988 43.478 0.00 0.00 0.00 4.45
2763 7076 5.396484 CAAGTGAGTTGATTATTGTGCAGG 58.604 41.667 0.00 0.00 38.60 4.85
2764 7077 4.855388 GCAAGTGAGTTGATTATTGTGCAG 59.145 41.667 3.80 0.00 38.60 4.41
2765 7078 4.613394 CGCAAGTGAGTTGATTATTGTGCA 60.613 41.667 3.80 0.00 38.60 4.57
2766 7079 3.848019 CGCAAGTGAGTTGATTATTGTGC 59.152 43.478 3.80 0.00 38.60 4.57
2767 7080 3.848019 GCGCAAGTGAGTTGATTATTGTG 59.152 43.478 0.30 0.00 38.60 3.33
2768 7081 3.501828 TGCGCAAGTGAGTTGATTATTGT 59.498 39.130 8.16 0.00 38.60 2.71
2769 7082 3.848019 GTGCGCAAGTGAGTTGATTATTG 59.152 43.478 14.00 0.00 38.60 1.90
2770 7083 3.424829 CGTGCGCAAGTGAGTTGATTATT 60.425 43.478 14.00 0.00 38.60 1.40
2771 7084 2.094258 CGTGCGCAAGTGAGTTGATTAT 59.906 45.455 14.00 0.00 38.60 1.28
2772 7085 1.459209 CGTGCGCAAGTGAGTTGATTA 59.541 47.619 14.00 0.00 38.60 1.75
2773 7086 0.235665 CGTGCGCAAGTGAGTTGATT 59.764 50.000 14.00 0.00 38.60 2.57
2774 7087 1.862123 CGTGCGCAAGTGAGTTGAT 59.138 52.632 14.00 0.00 38.60 2.57
2775 7088 2.881266 GCGTGCGCAAGTGAGTTGA 61.881 57.895 23.94 0.00 38.60 3.18
2776 7089 2.425773 GCGTGCGCAAGTGAGTTG 60.426 61.111 23.94 0.00 41.49 3.16
2786 7099 0.798009 ATGCTTTGTAATGCGTGCGC 60.798 50.000 9.85 9.85 42.35 6.09
2787 7100 1.182673 GATGCTTTGTAATGCGTGCG 58.817 50.000 2.42 0.00 32.27 5.34
2788 7101 1.548986 GGATGCTTTGTAATGCGTGC 58.451 50.000 2.42 2.01 31.46 5.34
2789 7102 1.531677 CGGGATGCTTTGTAATGCGTG 60.532 52.381 2.42 0.00 32.27 5.34
2790 7103 0.732571 CGGGATGCTTTGTAATGCGT 59.267 50.000 0.00 0.00 32.27 5.24
2814 7127 6.077838 GCTTAAGAAATCCAAGTGTTACACG 58.922 40.000 10.00 0.00 39.64 4.49
2839 7152 6.483307 TCGTCATCAACTCAAATTCAGAAAGT 59.517 34.615 0.00 0.00 0.00 2.66
2850 7163 7.307989 GGAAAGAAAGATTCGTCATCAACTCAA 60.308 37.037 1.13 0.00 33.75 3.02
2862 7175 4.153117 CACAGACCTGGAAAGAAAGATTCG 59.847 45.833 0.00 0.00 34.19 3.34
3094 7407 5.237127 TGAGTTGAGCATATTTCCATTAGCG 59.763 40.000 0.00 0.00 0.00 4.26
3173 7486 5.669164 AAGAGATAGGTCTTGTCCAGAAC 57.331 43.478 0.00 0.00 39.96 3.01
3174 7487 5.780282 TCAAAGAGATAGGTCTTGTCCAGAA 59.220 40.000 0.00 0.00 36.86 3.02
3175 7488 5.333581 TCAAAGAGATAGGTCTTGTCCAGA 58.666 41.667 0.00 0.00 36.86 3.86
3176 7489 5.667539 TCAAAGAGATAGGTCTTGTCCAG 57.332 43.478 0.00 0.00 36.86 3.86
3177 7490 5.485353 ACATCAAAGAGATAGGTCTTGTCCA 59.515 40.000 0.00 0.00 36.86 4.02
3178 7491 5.983540 ACATCAAAGAGATAGGTCTTGTCC 58.016 41.667 0.00 0.00 36.86 4.02
3179 7492 8.200792 ACATACATCAAAGAGATAGGTCTTGTC 58.799 37.037 0.00 0.00 36.86 3.18
3180 7493 8.083828 ACATACATCAAAGAGATAGGTCTTGT 57.916 34.615 0.00 0.00 36.86 3.16
3181 7494 8.824781 CAACATACATCAAAGAGATAGGTCTTG 58.175 37.037 0.00 0.00 36.86 3.02
3182 7495 7.497249 GCAACATACATCAAAGAGATAGGTCTT 59.503 37.037 0.00 0.00 38.48 3.01
3183 7496 6.989169 GCAACATACATCAAAGAGATAGGTCT 59.011 38.462 0.00 0.00 34.43 3.85
3184 7497 6.989169 AGCAACATACATCAAAGAGATAGGTC 59.011 38.462 0.00 0.00 34.43 3.85
3185 7498 6.893583 AGCAACATACATCAAAGAGATAGGT 58.106 36.000 0.00 0.00 34.43 3.08
3186 7499 7.215789 AGAGCAACATACATCAAAGAGATAGG 58.784 38.462 0.00 0.00 34.43 2.57
3187 7500 9.755804 TTAGAGCAACATACATCAAAGAGATAG 57.244 33.333 0.00 0.00 34.43 2.08
3189 7502 9.624373 ATTTAGAGCAACATACATCAAAGAGAT 57.376 29.630 0.00 0.00 37.48 2.75
3225 7538 4.517453 AGAAAGCGGCAATAAGTACAACAA 59.483 37.500 1.45 0.00 0.00 2.83
3227 7540 4.083484 ACAGAAAGCGGCAATAAGTACAAC 60.083 41.667 1.45 0.00 0.00 3.32
3235 7548 1.199789 CTGCAACAGAAAGCGGCAATA 59.800 47.619 1.45 0.00 33.58 1.90
3367 7680 7.969387 AATATTGAACGATTCACCAAATTCG 57.031 32.000 0.00 0.00 39.87 3.34
3398 7713 8.795842 AATATATCCGTGAACCAGTTTACAAA 57.204 30.769 6.30 0.00 0.00 2.83
3422 7737 1.279271 GCAGAGGGTTTCTCCAGCTAA 59.721 52.381 0.00 0.00 43.44 3.09
3431 7746 7.490402 CAGAATGAATTATTTGCAGAGGGTTTC 59.510 37.037 0.00 0.00 39.69 2.78
3435 7750 5.163488 TGCAGAATGAATTATTTGCAGAGGG 60.163 40.000 0.00 0.00 39.69 4.30
3436 7751 5.898174 TGCAGAATGAATTATTTGCAGAGG 58.102 37.500 0.00 0.00 39.69 3.69
3438 7753 6.927416 ACTTGCAGAATGAATTATTTGCAGA 58.073 32.000 2.26 0.00 40.45 4.26
3469 7787 1.542915 GAAGCAAGCCAAGAGAATGCA 59.457 47.619 0.00 0.00 39.42 3.96
3472 7790 2.040813 TCCAGAAGCAAGCCAAGAGAAT 59.959 45.455 0.00 0.00 0.00 2.40
3480 7798 1.959848 GGTTGTCCAGAAGCAAGCC 59.040 57.895 0.00 0.00 37.19 4.35
3502 7821 2.389962 ATAGCGCCGACAGGTTAAAA 57.610 45.000 2.29 0.00 40.50 1.52
3517 7836 8.475331 TCAGTAACTAAAGCAACTGTTATAGC 57.525 34.615 10.43 0.00 40.18 2.97
3555 7874 9.944376 ACTGTTATAGCTCTGACAGATTAAAAA 57.056 29.630 24.84 0.00 41.46 1.94
3556 7875 9.944376 AACTGTTATAGCTCTGACAGATTAAAA 57.056 29.630 24.84 0.00 41.46 1.52
3557 7876 9.371136 CAACTGTTATAGCTCTGACAGATTAAA 57.629 33.333 24.84 0.00 41.46 1.52
3558 7877 7.492669 GCAACTGTTATAGCTCTGACAGATTAA 59.507 37.037 24.84 0.19 41.46 1.40
3559 7878 6.980978 GCAACTGTTATAGCTCTGACAGATTA 59.019 38.462 24.84 2.64 41.46 1.75
3560 7879 5.814705 GCAACTGTTATAGCTCTGACAGATT 59.185 40.000 24.84 14.72 41.46 2.40
3561 7880 5.128499 AGCAACTGTTATAGCTCTGACAGAT 59.872 40.000 24.84 14.07 41.46 2.90
3562 7881 4.464244 AGCAACTGTTATAGCTCTGACAGA 59.536 41.667 24.84 4.78 41.46 3.41
3563 7882 4.753233 AGCAACTGTTATAGCTCTGACAG 58.247 43.478 18.76 18.76 43.81 3.51
3564 7883 4.808414 AGCAACTGTTATAGCTCTGACA 57.192 40.909 0.00 0.00 30.05 3.58
3565 7884 6.814146 ACTAAAGCAACTGTTATAGCTCTGAC 59.186 38.462 4.58 0.00 36.07 3.51
3566 7885 6.936279 ACTAAAGCAACTGTTATAGCTCTGA 58.064 36.000 4.58 0.00 36.07 3.27
3567 7886 6.813649 TGACTAAAGCAACTGTTATAGCTCTG 59.186 38.462 4.58 2.12 36.07 3.35
3568 7887 6.814146 GTGACTAAAGCAACTGTTATAGCTCT 59.186 38.462 4.58 0.00 36.07 4.09
3569 7888 6.814146 AGTGACTAAAGCAACTGTTATAGCTC 59.186 38.462 4.58 0.00 36.07 4.09
3570 7889 6.591834 CAGTGACTAAAGCAACTGTTATAGCT 59.408 38.462 0.00 0.00 39.37 3.32
3571 7890 6.590292 TCAGTGACTAAAGCAACTGTTATAGC 59.410 38.462 10.67 0.00 0.00 2.97
3572 7891 8.534333 TTCAGTGACTAAAGCAACTGTTATAG 57.466 34.615 0.00 0.00 0.00 1.31
3573 7892 8.935844 CATTCAGTGACTAAAGCAACTGTTATA 58.064 33.333 0.00 0.00 0.00 0.98
3574 7893 7.573843 GCATTCAGTGACTAAAGCAACTGTTAT 60.574 37.037 0.00 5.52 0.00 1.89
3575 7894 6.293407 GCATTCAGTGACTAAAGCAACTGTTA 60.293 38.462 0.00 4.01 0.00 2.41
3576 7895 5.506317 GCATTCAGTGACTAAAGCAACTGTT 60.506 40.000 0.00 0.00 0.00 3.16
3577 7896 4.023707 GCATTCAGTGACTAAAGCAACTGT 60.024 41.667 0.00 0.00 0.00 3.55
3578 7897 4.214971 AGCATTCAGTGACTAAAGCAACTG 59.785 41.667 0.00 6.39 0.00 3.16
3579 7898 4.392940 AGCATTCAGTGACTAAAGCAACT 58.607 39.130 0.00 0.00 0.00 3.16
3580 7899 4.756084 AGCATTCAGTGACTAAAGCAAC 57.244 40.909 0.00 0.00 0.00 4.17
3581 7900 5.362556 GAAGCATTCAGTGACTAAAGCAA 57.637 39.130 0.00 0.00 46.62 3.91
3639 7958 8.941977 ACGAACATTTGCATAGTATCAAAAGTA 58.058 29.630 12.24 0.00 34.37 2.24
3652 7971 1.176527 CTCCCCACGAACATTTGCAT 58.823 50.000 0.00 0.00 0.00 3.96
3694 8013 3.578282 TCAGTAACTGAGGCTGTCATTGA 59.422 43.478 0.00 0.00 35.39 2.57
3703 8022 4.160626 AGTTCTATGGTCAGTAACTGAGGC 59.839 45.833 0.00 0.00 41.46 4.70
3864 8183 3.810941 TGTACAAAATGGAAGGACGTGTC 59.189 43.478 0.00 0.00 0.00 3.67
3963 8282 1.555075 TGATTCCGGGTCTTCAAGGAG 59.445 52.381 0.00 0.00 33.89 3.69
3974 8293 1.405105 ACGCATTGAAATGATTCCGGG 59.595 47.619 0.00 0.00 38.70 5.73
3976 8295 1.847999 GCACGCATTGAAATGATTCCG 59.152 47.619 7.21 3.69 38.70 4.30
4027 8378 4.502604 GGTGGCACAAGTCAGAAGTAGTTA 60.503 45.833 20.82 0.00 44.16 2.24
4028 8379 3.467803 GTGGCACAAGTCAGAAGTAGTT 58.532 45.455 13.86 0.00 44.16 2.24
4038 8389 0.249031 GCAAAGTGGTGGCACAAGTC 60.249 55.000 20.82 1.98 44.16 3.01
4080 8431 0.962356 AAAAGAGCCCAGCATCACGG 60.962 55.000 0.00 0.00 0.00 4.94
4107 8458 0.036010 CTCACCGGATGTGGCTTCTT 60.036 55.000 9.46 0.00 45.48 2.52
4140 8491 0.519077 CTTCTTCTGCTTTGGTCGGC 59.481 55.000 0.00 0.00 0.00 5.54
4206 8557 6.481976 ACACGAAATGTACAGAATCACTCAAA 59.518 34.615 0.33 0.00 40.88 2.69
4306 8657 4.789095 TTTGTCGAACAAGACTTACAGC 57.211 40.909 0.00 0.00 39.53 4.40
4326 8677 7.505585 TGGTCTCCATTTCACTCTAACATTTTT 59.494 33.333 0.00 0.00 0.00 1.94
4339 8690 1.075374 CCCTGGTTGGTCTCCATTTCA 59.925 52.381 0.00 0.00 34.26 2.69
4549 8900 4.098894 AGTATTTTGGAACGGAGGGAGTA 58.901 43.478 0.00 0.00 0.00 2.59
4550 8901 2.910977 AGTATTTTGGAACGGAGGGAGT 59.089 45.455 0.00 0.00 0.00 3.85
4551 8902 3.532542 GAGTATTTTGGAACGGAGGGAG 58.467 50.000 0.00 0.00 0.00 4.30
4552 8903 2.237893 GGAGTATTTTGGAACGGAGGGA 59.762 50.000 0.00 0.00 0.00 4.20
4553 8904 2.640184 GGAGTATTTTGGAACGGAGGG 58.360 52.381 0.00 0.00 0.00 4.30
4554 8905 2.238898 AGGGAGTATTTTGGAACGGAGG 59.761 50.000 0.00 0.00 0.00 4.30
4555 8906 3.532542 GAGGGAGTATTTTGGAACGGAG 58.467 50.000 0.00 0.00 0.00 4.63
4556 8907 2.237893 GGAGGGAGTATTTTGGAACGGA 59.762 50.000 0.00 0.00 0.00 4.69
4557 8908 2.640184 GGAGGGAGTATTTTGGAACGG 58.360 52.381 0.00 0.00 0.00 4.44
4558 8909 2.277084 CGGAGGGAGTATTTTGGAACG 58.723 52.381 0.00 0.00 0.00 3.95
4559 8910 3.268330 GACGGAGGGAGTATTTTGGAAC 58.732 50.000 0.00 0.00 0.00 3.62
4560 8911 2.237893 GGACGGAGGGAGTATTTTGGAA 59.762 50.000 0.00 0.00 0.00 3.53
4561 8912 1.835531 GGACGGAGGGAGTATTTTGGA 59.164 52.381 0.00 0.00 0.00 3.53
4562 8913 1.557832 TGGACGGAGGGAGTATTTTGG 59.442 52.381 0.00 0.00 0.00 3.28
4563 8914 2.500098 TCTGGACGGAGGGAGTATTTTG 59.500 50.000 0.00 0.00 0.00 2.44
4564 8915 2.829023 TCTGGACGGAGGGAGTATTTT 58.171 47.619 0.00 0.00 0.00 1.82
4565 8916 2.544844 TCTGGACGGAGGGAGTATTT 57.455 50.000 0.00 0.00 0.00 1.40
4566 8917 2.544844 TTCTGGACGGAGGGAGTATT 57.455 50.000 0.00 0.00 0.00 1.89
4567 8918 2.544844 TTTCTGGACGGAGGGAGTAT 57.455 50.000 0.00 0.00 0.00 2.12
4568 8919 2.544844 ATTTCTGGACGGAGGGAGTA 57.455 50.000 0.00 0.00 0.00 2.59
4569 8920 2.108970 GTATTTCTGGACGGAGGGAGT 58.891 52.381 0.00 0.00 0.00 3.85
4570 8921 2.389715 AGTATTTCTGGACGGAGGGAG 58.610 52.381 0.00 0.00 0.00 4.30
4571 8922 2.500098 CAAGTATTTCTGGACGGAGGGA 59.500 50.000 0.00 0.00 0.00 4.20
4572 8923 2.236395 ACAAGTATTTCTGGACGGAGGG 59.764 50.000 0.00 0.00 0.00 4.30
4573 8924 3.056107 TGACAAGTATTTCTGGACGGAGG 60.056 47.826 0.00 0.00 0.00 4.30
4574 8925 4.188247 TGACAAGTATTTCTGGACGGAG 57.812 45.455 0.00 0.00 0.00 4.63
4575 8926 4.221924 TGATGACAAGTATTTCTGGACGGA 59.778 41.667 0.00 0.00 0.00 4.69
4576 8927 4.503910 TGATGACAAGTATTTCTGGACGG 58.496 43.478 0.00 0.00 0.00 4.79
4577 8928 6.480524 TTTGATGACAAGTATTTCTGGACG 57.519 37.500 0.00 0.00 37.32 4.79
4578 8929 7.756722 CCATTTTGATGACAAGTATTTCTGGAC 59.243 37.037 0.00 0.00 37.32 4.02
4579 8930 7.669304 TCCATTTTGATGACAAGTATTTCTGGA 59.331 33.333 0.00 0.00 37.32 3.86
4580 8931 7.829725 TCCATTTTGATGACAAGTATTTCTGG 58.170 34.615 0.00 0.00 37.32 3.86
4587 8938 8.748412 CCCTTTTATCCATTTTGATGACAAGTA 58.252 33.333 0.00 0.00 37.32 2.24
4588 8939 7.310609 CCCCTTTTATCCATTTTGATGACAAGT 60.311 37.037 0.00 0.00 37.32 3.16
4589 8940 7.043565 CCCCTTTTATCCATTTTGATGACAAG 58.956 38.462 0.00 0.00 37.32 3.16
4590 8941 6.728164 TCCCCTTTTATCCATTTTGATGACAA 59.272 34.615 0.00 0.00 0.00 3.18
4591 8942 6.259893 TCCCCTTTTATCCATTTTGATGACA 58.740 36.000 0.00 0.00 0.00 3.58
4592 8943 6.790232 TCCCCTTTTATCCATTTTGATGAC 57.210 37.500 0.00 0.00 0.00 3.06
4593 8944 6.327104 CCATCCCCTTTTATCCATTTTGATGA 59.673 38.462 0.00 0.00 0.00 2.92
4594 8945 6.327104 TCCATCCCCTTTTATCCATTTTGATG 59.673 38.462 0.00 0.00 0.00 3.07
4595 8946 6.451714 TCCATCCCCTTTTATCCATTTTGAT 58.548 36.000 0.00 0.00 0.00 2.57
4596 8947 5.848004 TCCATCCCCTTTTATCCATTTTGA 58.152 37.500 0.00 0.00 0.00 2.69
4597 8948 6.556116 AGATCCATCCCCTTTTATCCATTTTG 59.444 38.462 0.00 0.00 0.00 2.44
4598 8949 6.696638 AGATCCATCCCCTTTTATCCATTTT 58.303 36.000 0.00 0.00 0.00 1.82
4599 8950 6.299227 AGATCCATCCCCTTTTATCCATTT 57.701 37.500 0.00 0.00 0.00 2.32
4600 8951 5.955850 AGATCCATCCCCTTTTATCCATT 57.044 39.130 0.00 0.00 0.00 3.16
4601 8952 6.342520 TCTAGATCCATCCCCTTTTATCCAT 58.657 40.000 0.00 0.00 0.00 3.41
4602 8953 5.737318 TCTAGATCCATCCCCTTTTATCCA 58.263 41.667 0.00 0.00 0.00 3.41
4603 8954 6.216456 ACATCTAGATCCATCCCCTTTTATCC 59.784 42.308 1.03 0.00 0.00 2.59
4604 8955 7.264294 ACATCTAGATCCATCCCCTTTTATC 57.736 40.000 1.03 0.00 0.00 1.75
4605 8956 8.940012 ATACATCTAGATCCATCCCCTTTTAT 57.060 34.615 1.03 0.00 0.00 1.40
4606 8957 8.757307 AATACATCTAGATCCATCCCCTTTTA 57.243 34.615 1.03 0.00 0.00 1.52
4607 8958 7.654287 AATACATCTAGATCCATCCCCTTTT 57.346 36.000 1.03 0.00 0.00 2.27
4608 8959 7.654287 AAATACATCTAGATCCATCCCCTTT 57.346 36.000 1.03 0.00 0.00 3.11
4609 8960 7.654287 AAAATACATCTAGATCCATCCCCTT 57.346 36.000 1.03 0.00 0.00 3.95
4610 8961 7.964293 ACTAAAATACATCTAGATCCATCCCCT 59.036 37.037 1.03 0.00 0.00 4.79
4611 8962 8.152023 ACTAAAATACATCTAGATCCATCCCC 57.848 38.462 1.03 0.00 0.00 4.81
4612 8963 9.660180 GAACTAAAATACATCTAGATCCATCCC 57.340 37.037 1.03 0.00 0.00 3.85
4657 9008 9.527157 TCCCAAAATACTTGTCATCAAAATAGA 57.473 29.630 0.00 0.00 32.87 1.98
4658 9009 9.573133 GTCCCAAAATACTTGTCATCAAAATAG 57.427 33.333 0.00 0.00 32.87 1.73
4659 9010 8.240682 CGTCCCAAAATACTTGTCATCAAAATA 58.759 33.333 0.00 0.00 32.87 1.40
4660 9011 7.090173 CGTCCCAAAATACTTGTCATCAAAAT 58.910 34.615 0.00 0.00 32.87 1.82
4661 9012 6.442952 CGTCCCAAAATACTTGTCATCAAAA 58.557 36.000 0.00 0.00 32.87 2.44
4662 9013 5.048364 CCGTCCCAAAATACTTGTCATCAAA 60.048 40.000 0.00 0.00 32.87 2.69
4663 9014 4.457603 CCGTCCCAAAATACTTGTCATCAA 59.542 41.667 0.00 0.00 0.00 2.57
4664 9015 4.006989 CCGTCCCAAAATACTTGTCATCA 58.993 43.478 0.00 0.00 0.00 3.07
4665 9016 4.258543 TCCGTCCCAAAATACTTGTCATC 58.741 43.478 0.00 0.00 0.00 2.92
4666 9017 4.261801 CTCCGTCCCAAAATACTTGTCAT 58.738 43.478 0.00 0.00 0.00 3.06
4667 9018 3.558321 CCTCCGTCCCAAAATACTTGTCA 60.558 47.826 0.00 0.00 0.00 3.58
4668 9019 3.007635 CCTCCGTCCCAAAATACTTGTC 58.992 50.000 0.00 0.00 0.00 3.18
4669 9020 2.290705 CCCTCCGTCCCAAAATACTTGT 60.291 50.000 0.00 0.00 0.00 3.16
4670 9021 2.026636 TCCCTCCGTCCCAAAATACTTG 60.027 50.000 0.00 0.00 0.00 3.16
4671 9022 2.238898 CTCCCTCCGTCCCAAAATACTT 59.761 50.000 0.00 0.00 0.00 2.24
4672 9023 1.838077 CTCCCTCCGTCCCAAAATACT 59.162 52.381 0.00 0.00 0.00 2.12
4673 9024 1.558294 ACTCCCTCCGTCCCAAAATAC 59.442 52.381 0.00 0.00 0.00 1.89
4674 9025 1.961133 ACTCCCTCCGTCCCAAAATA 58.039 50.000 0.00 0.00 0.00 1.40
4675 9026 1.961133 TACTCCCTCCGTCCCAAAAT 58.039 50.000 0.00 0.00 0.00 1.82
4676 9027 1.732117 TTACTCCCTCCGTCCCAAAA 58.268 50.000 0.00 0.00 0.00 2.44
4677 9028 1.732117 TTTACTCCCTCCGTCCCAAA 58.268 50.000 0.00 0.00 0.00 3.28
4678 9029 1.557832 CATTTACTCCCTCCGTCCCAA 59.442 52.381 0.00 0.00 0.00 4.12
4679 9030 1.200519 CATTTACTCCCTCCGTCCCA 58.799 55.000 0.00 0.00 0.00 4.37
4680 9031 1.492764 TCATTTACTCCCTCCGTCCC 58.507 55.000 0.00 0.00 0.00 4.46
4681 9032 3.896272 ACTATCATTTACTCCCTCCGTCC 59.104 47.826 0.00 0.00 0.00 4.79
4682 9033 5.533903 TGTACTATCATTTACTCCCTCCGTC 59.466 44.000 0.00 0.00 0.00 4.79
4683 9034 5.452255 TGTACTATCATTTACTCCCTCCGT 58.548 41.667 0.00 0.00 0.00 4.69
4684 9035 6.401047 TTGTACTATCATTTACTCCCTCCG 57.599 41.667 0.00 0.00 0.00 4.63
4685 9036 7.793036 ACTTTGTACTATCATTTACTCCCTCC 58.207 38.462 0.00 0.00 0.00 4.30
4686 9037 9.099454 CAACTTTGTACTATCATTTACTCCCTC 57.901 37.037 0.00 0.00 0.00 4.30
4687 9038 8.047310 CCAACTTTGTACTATCATTTACTCCCT 58.953 37.037 0.00 0.00 0.00 4.20
4688 9039 7.282450 CCCAACTTTGTACTATCATTTACTCCC 59.718 40.741 0.00 0.00 0.00 4.30
4689 9040 7.827729 ACCCAACTTTGTACTATCATTTACTCC 59.172 37.037 0.00 0.00 0.00 3.85
4690 9041 8.788325 ACCCAACTTTGTACTATCATTTACTC 57.212 34.615 0.00 0.00 0.00 2.59
4691 9042 8.380099 TGACCCAACTTTGTACTATCATTTACT 58.620 33.333 0.00 0.00 0.00 2.24
4692 9043 8.556213 TGACCCAACTTTGTACTATCATTTAC 57.444 34.615 0.00 0.00 0.00 2.01
4693 9044 9.391006 GATGACCCAACTTTGTACTATCATTTA 57.609 33.333 0.00 0.00 0.00 1.40
4694 9045 8.109634 AGATGACCCAACTTTGTACTATCATTT 58.890 33.333 0.00 0.00 0.00 2.32
4695 9046 7.633789 AGATGACCCAACTTTGTACTATCATT 58.366 34.615 0.00 0.00 0.00 2.57
4696 9047 7.200434 AGATGACCCAACTTTGTACTATCAT 57.800 36.000 0.00 0.00 0.00 2.45
4697 9048 6.620877 AGATGACCCAACTTTGTACTATCA 57.379 37.500 0.00 0.00 0.00 2.15
4698 9049 9.614792 AAATAGATGACCCAACTTTGTACTATC 57.385 33.333 0.00 0.00 0.00 2.08
4699 9050 9.975218 AAAATAGATGACCCAACTTTGTACTAT 57.025 29.630 0.00 0.00 0.00 2.12
4700 9051 9.226606 CAAAATAGATGACCCAACTTTGTACTA 57.773 33.333 0.00 0.00 0.00 1.82
4701 9052 7.176690 CCAAAATAGATGACCCAACTTTGTACT 59.823 37.037 0.00 0.00 0.00 2.73
4702 9053 7.175990 TCCAAAATAGATGACCCAACTTTGTAC 59.824 37.037 0.00 0.00 0.00 2.90
4703 9054 7.235079 TCCAAAATAGATGACCCAACTTTGTA 58.765 34.615 0.00 0.00 0.00 2.41
4704 9055 6.074648 TCCAAAATAGATGACCCAACTTTGT 58.925 36.000 0.00 0.00 0.00 2.83
4705 9056 6.588719 TCCAAAATAGATGACCCAACTTTG 57.411 37.500 0.00 0.00 0.00 2.77
4706 9057 6.294508 CGTTCCAAAATAGATGACCCAACTTT 60.295 38.462 0.00 0.00 0.00 2.66
4707 9058 5.183140 CGTTCCAAAATAGATGACCCAACTT 59.817 40.000 0.00 0.00 0.00 2.66
4708 9059 4.700213 CGTTCCAAAATAGATGACCCAACT 59.300 41.667 0.00 0.00 0.00 3.16
4709 9060 4.142469 CCGTTCCAAAATAGATGACCCAAC 60.142 45.833 0.00 0.00 0.00 3.77
4710 9061 4.013728 CCGTTCCAAAATAGATGACCCAA 58.986 43.478 0.00 0.00 0.00 4.12
4711 9062 3.264706 TCCGTTCCAAAATAGATGACCCA 59.735 43.478 0.00 0.00 0.00 4.51
4712 9063 3.877508 CTCCGTTCCAAAATAGATGACCC 59.122 47.826 0.00 0.00 0.00 4.46
4713 9064 3.877508 CCTCCGTTCCAAAATAGATGACC 59.122 47.826 0.00 0.00 0.00 4.02
4714 9065 3.877508 CCCTCCGTTCCAAAATAGATGAC 59.122 47.826 0.00 0.00 0.00 3.06
4715 9066 3.778075 TCCCTCCGTTCCAAAATAGATGA 59.222 43.478 0.00 0.00 0.00 2.92
4716 9067 4.130118 CTCCCTCCGTTCCAAAATAGATG 58.870 47.826 0.00 0.00 0.00 2.90
4717 9068 3.780850 ACTCCCTCCGTTCCAAAATAGAT 59.219 43.478 0.00 0.00 0.00 1.98
4718 9069 3.178865 ACTCCCTCCGTTCCAAAATAGA 58.821 45.455 0.00 0.00 0.00 1.98
4719 9070 3.629142 ACTCCCTCCGTTCCAAAATAG 57.371 47.619 0.00 0.00 0.00 1.73
4720 9071 3.839490 TGTACTCCCTCCGTTCCAAAATA 59.161 43.478 0.00 0.00 0.00 1.40
4721 9072 2.640826 TGTACTCCCTCCGTTCCAAAAT 59.359 45.455 0.00 0.00 0.00 1.82
4722 9073 2.048601 TGTACTCCCTCCGTTCCAAAA 58.951 47.619 0.00 0.00 0.00 2.44
4723 9074 1.719529 TGTACTCCCTCCGTTCCAAA 58.280 50.000 0.00 0.00 0.00 3.28
4724 9075 1.946984 ATGTACTCCCTCCGTTCCAA 58.053 50.000 0.00 0.00 0.00 3.53
4725 9076 1.829222 GAATGTACTCCCTCCGTTCCA 59.171 52.381 0.00 0.00 0.00 3.53
4726 9077 2.108970 AGAATGTACTCCCTCCGTTCC 58.891 52.381 0.00 0.00 0.00 3.62
4727 9078 2.758979 TCAGAATGTACTCCCTCCGTTC 59.241 50.000 0.00 0.00 37.40 3.95
4728 9079 2.761208 CTCAGAATGTACTCCCTCCGTT 59.239 50.000 0.00 0.00 37.40 4.44
4729 9080 2.379972 CTCAGAATGTACTCCCTCCGT 58.620 52.381 0.00 0.00 37.40 4.69
4730 9081 1.067821 GCTCAGAATGTACTCCCTCCG 59.932 57.143 0.00 0.00 37.40 4.63
4731 9082 2.102252 CTGCTCAGAATGTACTCCCTCC 59.898 54.545 0.00 0.00 37.40 4.30
4732 9083 2.102252 CCTGCTCAGAATGTACTCCCTC 59.898 54.545 0.00 0.00 37.40 4.30
4733 9084 2.114616 CCTGCTCAGAATGTACTCCCT 58.885 52.381 0.00 0.00 37.40 4.20
4734 9085 1.474143 GCCTGCTCAGAATGTACTCCC 60.474 57.143 0.00 0.00 37.40 4.30
4735 9086 1.484240 AGCCTGCTCAGAATGTACTCC 59.516 52.381 0.00 0.00 37.40 3.85
4736 9087 2.167281 TGAGCCTGCTCAGAATGTACTC 59.833 50.000 17.46 0.00 46.80 2.59
4737 9088 2.182827 TGAGCCTGCTCAGAATGTACT 58.817 47.619 17.46 0.00 46.80 2.73
4738 9089 2.680312 TGAGCCTGCTCAGAATGTAC 57.320 50.000 17.46 0.00 46.80 2.90
4898 9318 2.353406 GCTGGCTTGCAATCAACAAGAT 60.353 45.455 0.00 0.00 45.99 2.40
4934 9354 7.209471 ACTCAGTAAGACTACTTGTGAAGAG 57.791 40.000 0.00 0.00 36.14 2.85
4963 9383 4.035278 TGTTGTTAAGAAAACAAGGCGG 57.965 40.909 3.67 0.00 40.38 6.13
5066 9486 6.428385 AGAAGATCCGAACATTTCATCAAC 57.572 37.500 0.00 0.00 0.00 3.18
5101 9521 3.402628 TGTCACAACTTCTTAGCCCTC 57.597 47.619 0.00 0.00 0.00 4.30


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.