Multiple sequence alignment - TraesCS3B01G594200

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G594200 chr3B 100.000 6371 0 0 2652 9022 817519304 817525674 0.000000e+00 11766.0
1 TraesCS3B01G594200 chr3B 100.000 2339 0 0 1 2339 817516653 817518991 0.000000e+00 4320.0
2 TraesCS3B01G594200 chr3B 90.372 3064 231 23 2652 5665 817638709 817635660 0.000000e+00 3965.0
3 TraesCS3B01G594200 chr3B 91.345 2461 204 7 6017 8473 817633405 817630950 0.000000e+00 3356.0
4 TraesCS3B01G594200 chr3B 91.969 523 35 4 1819 2339 817639243 817638726 0.000000e+00 726.0
5 TraesCS3B01G594200 chr3B 84.219 621 38 25 922 1540 817640237 817639675 4.760000e-152 549.0
6 TraesCS3B01G594200 chr3B 93.017 358 24 1 5665 6022 817635752 817635396 1.040000e-143 521.0
7 TraesCS3B01G594200 chr3B 90.000 240 10 8 449 688 817640480 817640255 1.900000e-76 298.0
8 TraesCS3B01G594200 chr3B 100.000 93 0 0 5665 5757 817522225 817522317 1.200000e-38 172.0
9 TraesCS3B01G594200 chr3B 100.000 93 0 0 5573 5665 817522317 817522409 1.200000e-38 172.0
10 TraesCS3B01G594200 chr3B 95.000 40 1 1 3534 3572 817637742 817637703 2.720000e-05 62.1
11 TraesCS3B01G594200 chr3D 91.635 2941 189 22 2763 5665 607983365 607980444 0.000000e+00 4015.0
12 TraesCS3B01G594200 chr3D 91.514 2899 210 18 5665 8547 607980536 607977658 0.000000e+00 3958.0
13 TraesCS3B01G594200 chr3D 92.381 525 33 3 1819 2339 607984282 607983761 0.000000e+00 741.0
14 TraesCS3B01G594200 chr3D 86.667 330 38 5 8696 9022 607977472 607977146 2.390000e-95 361.0
15 TraesCS3B01G594200 chr3D 83.623 403 32 11 722 1092 607985390 607984990 1.860000e-91 348.0
16 TraesCS3B01G594200 chr3D 85.366 287 11 5 1255 1540 607984995 607984739 1.490000e-67 268.0
17 TraesCS3B01G594200 chr3D 77.462 457 62 22 1854 2280 469493080 469492635 1.510000e-57 235.0
18 TraesCS3B01G594200 chr3D 86.058 208 15 7 449 653 607986220 607986024 2.550000e-50 211.0
19 TraesCS3B01G594200 chr3D 74.951 515 65 27 1821 2280 7579366 7579871 2.590000e-40 178.0
20 TraesCS3B01G594200 chr3A 90.890 1899 161 8 5665 7557 740193726 740191834 0.000000e+00 2538.0
21 TraesCS3B01G594200 chr3A 90.754 995 91 1 7554 8547 740165519 740164525 0.000000e+00 1327.0
22 TraesCS3B01G594200 chr3A 91.632 729 59 2 4938 5665 740194361 740193634 0.000000e+00 1007.0
23 TraesCS3B01G594200 chr3A 81.313 396 25 15 693 1056 740157719 740157341 8.920000e-70 276.0
24 TraesCS3B01G594200 chr3A 86.452 155 16 4 8544 8693 740164491 740164337 2.020000e-36 165.0
25 TraesCS3B01G594200 chr3A 87.037 108 10 2 162 269 746096335 746096232 1.590000e-22 119.0
26 TraesCS3B01G594200 chr3A 92.537 67 3 2 449 514 740158235 740158170 2.680000e-15 95.3
27 TraesCS3B01G594200 chr4D 82.546 1524 202 34 5664 7170 414620480 414621956 0.000000e+00 1282.0
28 TraesCS3B01G594200 chr4D 78.764 1813 290 62 3789 5581 414618456 414620193 0.000000e+00 1127.0
29 TraesCS3B01G594200 chr4D 81.753 970 143 21 4702 5665 414619632 414620573 0.000000e+00 780.0
30 TraesCS3B01G594200 chr4D 76.464 854 140 41 2993 3811 414617548 414618375 3.030000e-109 407.0
31 TraesCS3B01G594200 chr4D 79.718 567 83 22 7715 8250 414623154 414623719 1.840000e-101 381.0
32 TraesCS3B01G594200 chr4D 80.495 323 54 5 8696 9012 414624128 414624447 1.170000e-58 239.0
33 TraesCS3B01G594200 chr4D 77.014 422 65 20 1829 2231 503413578 503413986 7.100000e-51 213.0
34 TraesCS3B01G594200 chr4D 77.607 326 34 20 506 801 415005414 415005098 2.610000e-35 161.0
35 TraesCS3B01G594200 chr4A 81.956 1513 212 31 5665 7162 48896029 48894563 0.000000e+00 1225.0
36 TraesCS3B01G594200 chr4A 77.464 1806 312 65 3794 5581 48898037 48896309 0.000000e+00 992.0
37 TraesCS3B01G594200 chr4A 81.718 908 124 25 4781 5677 48896799 48895923 0.000000e+00 719.0
38 TraesCS3B01G594200 chr4A 77.315 864 120 35 2993 3814 48898951 48898122 2.990000e-119 440.0
39 TraesCS3B01G594200 chr4A 80.860 465 65 18 7809 8250 48891804 48891341 2.410000e-90 344.0
40 TraesCS3B01G594200 chr4A 79.819 332 57 9 8696 9021 48890922 48890595 5.450000e-57 233.0
41 TraesCS3B01G594200 chr4A 82.828 198 32 2 927 1122 48902911 48902714 9.310000e-40 176.0
42 TraesCS3B01G594200 chr4B 79.510 1469 234 47 3789 5250 510838341 510839749 0.000000e+00 983.0
43 TraesCS3B01G594200 chr4B 80.778 1311 188 33 5875 7170 510840545 510841806 0.000000e+00 966.0
44 TraesCS3B01G594200 chr4B 77.083 816 115 34 3035 3811 510837478 510838260 1.090000e-108 405.0
45 TraesCS3B01G594200 chr4B 84.039 307 40 6 7729 8027 510844038 510844343 4.120000e-73 287.0
46 TraesCS3B01G594200 chr4B 90.860 186 17 0 5665 5850 510840365 510840550 5.410000e-62 250.0
47 TraesCS3B01G594200 chr4B 79.679 374 50 11 7167 7539 511163272 511162924 7.000000e-61 246.0
48 TraesCS3B01G594200 chr4B 73.274 782 101 61 506 1213 511169531 511168784 4.300000e-43 187.0
49 TraesCS3B01G594200 chr4B 83.673 196 28 2 927 1122 510831448 510831639 2.000000e-41 182.0
50 TraesCS3B01G594200 chr4B 85.806 155 20 2 1854 2006 590141632 590141786 7.250000e-36 163.0
51 TraesCS3B01G594200 chr4B 90.385 104 7 1 162 265 522436834 522436934 5.680000e-27 134.0
52 TraesCS3B01G594200 chr4B 85.950 121 15 2 8892 9012 510845203 510845321 2.640000e-25 128.0
53 TraesCS3B01G594200 chr4B 88.235 102 8 2 165 265 406462368 406462466 1.590000e-22 119.0
54 TraesCS3B01G594200 chr4B 85.714 98 11 1 168 265 575761596 575761690 5.760000e-17 100.0
55 TraesCS3B01G594200 chr2D 75.538 511 58 34 1821 2280 203456978 203456484 1.200000e-43 189.0
56 TraesCS3B01G594200 chr2D 83.838 99 13 1 162 260 602715017 602714922 3.470000e-14 91.6
57 TraesCS3B01G594200 chr7D 80.729 192 26 7 1821 2006 70900889 70900703 1.220000e-28 139.0
58 TraesCS3B01G594200 chr7D 100.000 29 0 0 242 270 11919037 11919065 5.000000e-03 54.7
59 TraesCS3B01G594200 chr1B 75.000 352 61 17 1954 2280 608350973 608350624 4.390000e-28 137.0
60 TraesCS3B01G594200 chr6B 92.222 90 7 0 162 251 712095978 712096067 2.640000e-25 128.0
61 TraesCS3B01G594200 chr1D 88.462 104 9 1 162 265 295841941 295841841 1.230000e-23 122.0
62 TraesCS3B01G594200 chr1D 86.066 122 6 9 1880 2001 339304120 339304230 4.420000e-23 121.0
63 TraesCS3B01G594200 chr1A 86.667 105 11 1 162 266 95051951 95051850 7.400000e-21 113.0
64 TraesCS3B01G594200 chr5D 84.211 95 11 2 164 257 42231746 42231837 1.250000e-13 89.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G594200 chr3B 817516653 817525674 9021 False 4107.500000 11766 100.000000 1 9022 4 chr3B.!!$F1 9021
1 TraesCS3B01G594200 chr3B 817630950 817640480 9530 True 1353.871429 3965 90.846000 449 8473 7 chr3B.!!$R1 8024
2 TraesCS3B01G594200 chr3D 607977146 607986220 9074 True 1414.571429 4015 88.177714 449 9022 7 chr3D.!!$R2 8573
3 TraesCS3B01G594200 chr3A 740191834 740194361 2527 True 1772.500000 2538 91.261000 4938 7557 2 chr3A.!!$R4 2619
4 TraesCS3B01G594200 chr3A 740164337 740165519 1182 True 746.000000 1327 88.603000 7554 8693 2 chr3A.!!$R3 1139
5 TraesCS3B01G594200 chr4D 414617548 414624447 6899 False 702.666667 1282 79.956667 2993 9012 6 chr4D.!!$F2 6019
6 TraesCS3B01G594200 chr4A 48890595 48902911 12316 True 589.857143 1225 80.280000 927 9021 7 chr4A.!!$R1 8094
7 TraesCS3B01G594200 chr4B 510837478 510845321 7843 False 503.166667 983 83.036667 3035 9012 6 chr4B.!!$F6 5977

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
73 74 0.101759 TAGGTGCGACGCCATTACTC 59.898 55.000 18.69 3.23 36.32 2.59 F
86 87 0.178843 ATTACTCCTGGTGGGTGGGT 60.179 55.000 0.33 0.00 36.25 4.51 F
194 195 0.179121 ACGACACACGAGCTGTTTGA 60.179 50.000 0.00 0.00 45.77 2.69 F
371 372 0.179197 GAGCGCCGTTTTTAAGAGGC 60.179 55.000 2.29 0.00 45.67 4.70 F
640 644 0.249489 CGCTTCCGAAGATACCCCTG 60.249 60.000 12.54 0.00 36.29 4.45 F
734 1307 0.256464 TCTCCTTCCTCTCCGTCTCC 59.744 60.000 0.00 0.00 0.00 3.71 F
866 1460 0.324943 GGAGTTGCTGGCTGACCTTA 59.675 55.000 0.00 0.00 36.63 2.69 F
867 1461 1.271379 GGAGTTGCTGGCTGACCTTAA 60.271 52.381 0.00 0.00 36.63 1.85 F
2856 4525 1.047002 TGGGGGTTGCAATTTGTCAG 58.953 50.000 0.59 0.00 0.00 3.51 F
3534 7030 0.032952 TGAACCTGGTCGAAGTTCGG 59.967 55.000 24.18 10.77 42.22 4.30 F
3671 7167 0.468226 TCGAAGACCACCTGCAAAGT 59.532 50.000 0.00 0.00 0.00 2.66 F
4943 8586 0.916086 AGGTTCCCGTGCCATATTCA 59.084 50.000 0.00 0.00 0.00 2.57 F
5707 9664 0.033228 CAAAGATTTGGGTTGCCGCA 59.967 50.000 0.00 0.00 34.59 5.69 F
6753 12721 0.112995 AAGCTTGGCAAGGATGTCCA 59.887 50.000 27.25 0.00 38.89 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1126 1733 1.226888 CGAAGTCGAACCGATCCCC 60.227 63.158 0.00 0.00 43.02 4.81 R
1705 2497 1.922369 ATGCCACAGGGACAGAGCT 60.922 57.895 0.00 0.00 35.59 4.09 R
1738 2578 3.876198 GCCGCTAACATGTGGGCG 61.876 66.667 27.64 27.64 45.97 6.13 R
2286 3687 1.754803 CTCAACTAGTCCCGTATGCCA 59.245 52.381 0.00 0.00 0.00 4.92 R
2313 3714 7.581476 ACACACAAGTTAAATACATACACTGC 58.419 34.615 0.00 0.00 0.00 4.40 R
2653 4054 1.005423 TGCCTCCATGACCCCCATA 59.995 57.895 0.00 0.00 33.31 2.74 R
2780 4449 1.107114 ACACAGTGGCGGATCTAGAG 58.893 55.000 5.31 0.00 0.00 2.43 R
2872 4541 1.340697 ACTTCTTTATTCACCGGCCCC 60.341 52.381 0.00 0.00 0.00 5.80 R
3670 7166 0.100682 TCATTGCTCTCTCGGCGTAC 59.899 55.000 6.85 0.00 0.00 3.67 R
4410 8050 0.392863 TCATTACCGACGGACCTCGA 60.393 55.000 23.38 7.27 42.43 4.04 R
5350 9306 0.830648 ATGGACGATGGTGTTCCGAT 59.169 50.000 0.00 0.00 36.30 4.18 R
6576 12543 0.816018 TGTTGAACGTCGTGGCCATT 60.816 50.000 9.72 0.00 0.00 3.16 R
7540 16420 0.462047 AATAAGAGCCAACCGCCTCG 60.462 55.000 0.00 0.00 38.78 4.63 R
8044 16974 0.036164 ATTAACGCTGAGGCCACACA 59.964 50.000 5.01 0.71 34.44 3.72 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.774351 GAGGGATGGGGTGGGAGG 60.774 72.222 0.00 0.00 0.00 4.30
18 19 3.300962 AGGGATGGGGTGGGAGGA 61.301 66.667 0.00 0.00 0.00 3.71
19 20 2.774351 GGGATGGGGTGGGAGGAG 60.774 72.222 0.00 0.00 0.00 3.69
20 21 2.774351 GGATGGGGTGGGAGGAGG 60.774 72.222 0.00 0.00 0.00 4.30
21 22 2.774351 GATGGGGTGGGAGGAGGG 60.774 72.222 0.00 0.00 0.00 4.30
22 23 4.455137 ATGGGGTGGGAGGAGGGG 62.455 72.222 0.00 0.00 0.00 4.79
24 25 4.124126 GGGGTGGGAGGAGGGGAT 62.124 72.222 0.00 0.00 0.00 3.85
25 26 2.733666 GGGGTGGGAGGAGGGGATA 61.734 68.421 0.00 0.00 0.00 2.59
26 27 1.152008 GGGTGGGAGGAGGGGATAG 60.152 68.421 0.00 0.00 0.00 2.08
27 28 1.675936 GGGTGGGAGGAGGGGATAGA 61.676 65.000 0.00 0.00 0.00 1.98
28 29 0.494095 GGTGGGAGGAGGGGATAGAT 59.506 60.000 0.00 0.00 0.00 1.98
29 30 1.722851 GGTGGGAGGAGGGGATAGATA 59.277 57.143 0.00 0.00 0.00 1.98
30 31 2.113777 GGTGGGAGGAGGGGATAGATAA 59.886 54.545 0.00 0.00 0.00 1.75
31 32 3.445987 GTGGGAGGAGGGGATAGATAAG 58.554 54.545 0.00 0.00 0.00 1.73
32 33 2.225650 TGGGAGGAGGGGATAGATAAGC 60.226 54.545 0.00 0.00 0.00 3.09
33 34 2.473070 GGAGGAGGGGATAGATAAGCC 58.527 57.143 0.00 0.00 0.00 4.35
34 35 2.473070 GAGGAGGGGATAGATAAGCCC 58.527 57.143 0.00 0.00 41.28 5.19
35 36 2.045186 GAGGAGGGGATAGATAAGCCCT 59.955 54.545 0.00 0.00 41.72 5.19
36 37 2.045186 AGGAGGGGATAGATAAGCCCTC 59.955 54.545 0.04 0.04 41.72 4.30
37 38 2.104170 GAGGGGATAGATAAGCCCTCG 58.896 57.143 0.00 0.00 41.72 4.63
38 39 0.537653 GGGGATAGATAAGCCCTCGC 59.462 60.000 0.00 0.00 41.72 5.03
47 48 2.998097 AGCCCTCGCTGCCATTAA 59.002 55.556 0.00 0.00 46.19 1.40
48 49 1.533711 AGCCCTCGCTGCCATTAAT 59.466 52.632 0.00 0.00 46.19 1.40
49 50 0.820891 AGCCCTCGCTGCCATTAATG 60.821 55.000 8.58 8.58 46.19 1.90
60 61 0.951558 CCATTAATGGCGGTAGGTGC 59.048 55.000 21.32 0.00 41.75 5.01
61 62 0.586319 CATTAATGGCGGTAGGTGCG 59.414 55.000 7.62 0.00 0.00 5.34
62 63 0.466543 ATTAATGGCGGTAGGTGCGA 59.533 50.000 0.00 0.00 0.00 5.10
63 64 0.460635 TTAATGGCGGTAGGTGCGAC 60.461 55.000 0.00 0.00 0.00 5.19
64 65 2.616786 TAATGGCGGTAGGTGCGACG 62.617 60.000 0.00 0.00 0.00 5.12
68 69 4.508128 CGGTAGGTGCGACGCCAT 62.508 66.667 18.69 8.99 36.32 4.40
69 70 2.125269 GGTAGGTGCGACGCCATT 60.125 61.111 18.69 4.82 36.32 3.16
70 71 1.142314 GGTAGGTGCGACGCCATTA 59.858 57.895 18.69 3.78 36.32 1.90
71 72 1.149964 GGTAGGTGCGACGCCATTAC 61.150 60.000 18.69 15.28 36.32 1.89
72 73 0.179119 GTAGGTGCGACGCCATTACT 60.179 55.000 18.69 10.32 36.32 2.24
73 74 0.101759 TAGGTGCGACGCCATTACTC 59.898 55.000 18.69 3.23 36.32 2.59
74 75 2.171725 GGTGCGACGCCATTACTCC 61.172 63.158 18.69 4.74 33.65 3.85
75 76 1.153628 GTGCGACGCCATTACTCCT 60.154 57.895 18.69 0.00 0.00 3.69
76 77 1.153647 TGCGACGCCATTACTCCTG 60.154 57.895 18.69 0.00 0.00 3.86
77 78 1.883084 GCGACGCCATTACTCCTGG 60.883 63.158 9.14 0.00 36.81 4.45
78 79 1.515954 CGACGCCATTACTCCTGGT 59.484 57.895 0.00 0.00 36.10 4.00
80 81 0.462047 GACGCCATTACTCCTGGTGG 60.462 60.000 7.70 0.00 46.37 4.61
81 82 1.153168 CGCCATTACTCCTGGTGGG 60.153 63.158 0.33 0.00 39.99 4.61
82 83 1.910580 CGCCATTACTCCTGGTGGGT 61.911 60.000 0.33 0.00 39.99 4.51
83 84 0.394352 GCCATTACTCCTGGTGGGTG 60.394 60.000 0.33 0.00 36.10 4.61
84 85 0.255890 CCATTACTCCTGGTGGGTGG 59.744 60.000 0.33 2.03 36.25 4.61
85 86 0.255890 CATTACTCCTGGTGGGTGGG 59.744 60.000 0.33 0.00 36.25 4.61
86 87 0.178843 ATTACTCCTGGTGGGTGGGT 60.179 55.000 0.33 0.00 36.25 4.51
87 88 0.402272 TTACTCCTGGTGGGTGGGTT 60.402 55.000 0.33 0.00 36.25 4.11
88 89 1.131303 TACTCCTGGTGGGTGGGTTG 61.131 60.000 0.33 0.00 36.25 3.77
89 90 3.182263 TCCTGGTGGGTGGGTTGG 61.182 66.667 0.00 0.00 36.25 3.77
90 91 4.299796 CCTGGTGGGTGGGTTGGG 62.300 72.222 0.00 0.00 0.00 4.12
91 92 3.507713 CTGGTGGGTGGGTTGGGT 61.508 66.667 0.00 0.00 0.00 4.51
92 93 3.030611 TGGTGGGTGGGTTGGGTT 61.031 61.111 0.00 0.00 0.00 4.11
93 94 2.203582 GGTGGGTGGGTTGGGTTC 60.204 66.667 0.00 0.00 0.00 3.62
94 95 2.596338 GTGGGTGGGTTGGGTTCG 60.596 66.667 0.00 0.00 0.00 3.95
95 96 4.589675 TGGGTGGGTTGGGTTCGC 62.590 66.667 0.00 0.00 0.00 4.70
125 126 5.333566 TTTTTCACCCTCCATTACTCCTT 57.666 39.130 0.00 0.00 0.00 3.36
126 127 4.301072 TTTCACCCTCCATTACTCCTTG 57.699 45.455 0.00 0.00 0.00 3.61
127 128 1.559682 TCACCCTCCATTACTCCTTGC 59.440 52.381 0.00 0.00 0.00 4.01
128 129 1.561542 CACCCTCCATTACTCCTTGCT 59.438 52.381 0.00 0.00 0.00 3.91
129 130 1.840635 ACCCTCCATTACTCCTTGCTC 59.159 52.381 0.00 0.00 0.00 4.26
130 131 1.202580 CCCTCCATTACTCCTTGCTCG 60.203 57.143 0.00 0.00 0.00 5.03
131 132 1.757118 CCTCCATTACTCCTTGCTCGA 59.243 52.381 0.00 0.00 0.00 4.04
132 133 2.168521 CCTCCATTACTCCTTGCTCGAA 59.831 50.000 0.00 0.00 0.00 3.71
133 134 3.181461 CCTCCATTACTCCTTGCTCGAAT 60.181 47.826 0.00 0.00 0.00 3.34
134 135 4.446371 CTCCATTACTCCTTGCTCGAATT 58.554 43.478 0.00 0.00 0.00 2.17
135 136 4.843728 TCCATTACTCCTTGCTCGAATTT 58.156 39.130 0.00 0.00 0.00 1.82
136 137 5.253330 TCCATTACTCCTTGCTCGAATTTT 58.747 37.500 0.00 0.00 0.00 1.82
137 138 5.123820 TCCATTACTCCTTGCTCGAATTTTG 59.876 40.000 0.00 0.00 0.00 2.44
138 139 5.123820 CCATTACTCCTTGCTCGAATTTTGA 59.876 40.000 0.00 0.00 0.00 2.69
139 140 5.862924 TTACTCCTTGCTCGAATTTTGAG 57.137 39.130 9.02 9.02 36.53 3.02
140 141 3.744660 ACTCCTTGCTCGAATTTTGAGT 58.255 40.909 13.90 1.90 35.85 3.41
141 142 3.499918 ACTCCTTGCTCGAATTTTGAGTG 59.500 43.478 13.90 6.16 35.85 3.51
142 143 3.738982 TCCTTGCTCGAATTTTGAGTGA 58.261 40.909 13.90 4.95 35.85 3.41
143 144 3.748048 TCCTTGCTCGAATTTTGAGTGAG 59.252 43.478 13.90 11.46 35.85 3.51
144 145 3.120060 CCTTGCTCGAATTTTGAGTGAGG 60.120 47.826 13.90 15.36 35.85 3.86
145 146 1.806542 TGCTCGAATTTTGAGTGAGGC 59.193 47.619 13.90 2.51 35.85 4.70
146 147 1.131315 GCTCGAATTTTGAGTGAGGCC 59.869 52.381 13.90 0.00 35.85 5.19
147 148 1.394917 CTCGAATTTTGAGTGAGGCCG 59.605 52.381 0.00 0.00 0.00 6.13
148 149 1.001520 TCGAATTTTGAGTGAGGCCGA 59.998 47.619 0.00 0.00 0.00 5.54
149 150 1.128692 CGAATTTTGAGTGAGGCCGAC 59.871 52.381 0.00 0.00 0.00 4.79
150 151 1.128692 GAATTTTGAGTGAGGCCGACG 59.871 52.381 0.00 0.00 0.00 5.12
151 152 0.673644 ATTTTGAGTGAGGCCGACGG 60.674 55.000 10.29 10.29 0.00 4.79
162 163 3.487202 CCGACGGCGACAATGGTG 61.487 66.667 15.16 0.00 40.82 4.17
163 164 3.487202 CGACGGCGACAATGGTGG 61.487 66.667 16.62 0.00 40.82 4.61
164 165 2.047655 GACGGCGACAATGGTGGA 60.048 61.111 16.62 0.00 0.00 4.02
165 166 1.669760 GACGGCGACAATGGTGGAA 60.670 57.895 16.62 0.00 0.00 3.53
166 167 1.908066 GACGGCGACAATGGTGGAAC 61.908 60.000 16.62 0.00 0.00 3.62
177 178 3.315796 GTGGAACCACACACGACG 58.684 61.111 17.69 0.00 45.53 5.12
178 179 1.227031 GTGGAACCACACACGACGA 60.227 57.895 17.69 0.00 45.53 4.20
179 180 1.227031 TGGAACCACACACGACGAC 60.227 57.895 0.00 0.00 0.00 4.34
180 181 1.227031 GGAACCACACACGACGACA 60.227 57.895 0.00 0.00 0.00 4.35
181 182 1.485032 GGAACCACACACGACGACAC 61.485 60.000 0.00 0.00 0.00 3.67
182 183 0.802994 GAACCACACACGACGACACA 60.803 55.000 0.00 0.00 0.00 3.72
183 184 1.079875 AACCACACACGACGACACAC 61.080 55.000 0.00 0.00 0.00 3.82
185 186 1.584225 CACACACGACGACACACGA 60.584 57.895 0.00 0.00 45.77 4.35
186 187 1.298116 ACACACGACGACACACGAG 60.298 57.895 0.00 0.00 45.77 4.18
187 188 2.353145 ACACGACGACACACGAGC 60.353 61.111 0.00 0.00 45.77 5.03
188 189 2.051256 CACGACGACACACGAGCT 60.051 61.111 0.00 0.00 45.77 4.09
189 190 2.051256 ACGACGACACACGAGCTG 60.051 61.111 0.00 0.00 45.77 4.24
190 191 2.051256 CGACGACACACGAGCTGT 60.051 61.111 0.00 0.00 45.77 4.40
191 192 1.657487 CGACGACACACGAGCTGTT 60.657 57.895 0.00 0.00 45.77 3.16
192 193 1.206745 CGACGACACACGAGCTGTTT 61.207 55.000 0.00 0.00 45.77 2.83
193 194 0.229753 GACGACACACGAGCTGTTTG 59.770 55.000 0.00 0.00 45.77 2.93
194 195 0.179121 ACGACACACGAGCTGTTTGA 60.179 50.000 0.00 0.00 45.77 2.69
195 196 0.229753 CGACACACGAGCTGTTTGAC 59.770 55.000 0.00 0.00 45.77 3.18
196 197 0.582005 GACACACGAGCTGTTTGACC 59.418 55.000 0.00 0.00 32.50 4.02
197 198 0.814010 ACACACGAGCTGTTTGACCC 60.814 55.000 0.00 0.00 32.50 4.46
198 199 0.813610 CACACGAGCTGTTTGACCCA 60.814 55.000 0.00 0.00 29.42 4.51
199 200 0.532862 ACACGAGCTGTTTGACCCAG 60.533 55.000 0.00 0.00 0.00 4.45
204 205 4.779475 CTGTTTGACCCAGCTCGT 57.221 55.556 0.00 0.00 0.00 4.18
205 206 2.238353 CTGTTTGACCCAGCTCGTG 58.762 57.895 0.00 0.00 0.00 4.35
206 207 0.532862 CTGTTTGACCCAGCTCGTGT 60.533 55.000 0.00 0.00 0.00 4.49
207 208 0.531974 TGTTTGACCCAGCTCGTGTC 60.532 55.000 0.00 0.00 0.00 3.67
208 209 1.300620 TTTGACCCAGCTCGTGTCG 60.301 57.895 0.00 0.00 0.00 4.35
209 210 2.023414 TTTGACCCAGCTCGTGTCGT 62.023 55.000 0.00 0.00 0.00 4.34
210 211 2.430921 GACCCAGCTCGTGTCGTG 60.431 66.667 0.00 0.00 0.00 4.35
211 212 3.916392 GACCCAGCTCGTGTCGTGG 62.916 68.421 0.00 0.00 0.00 4.94
229 230 4.863707 CGGAGCCATGTGCAGTAT 57.136 55.556 8.58 0.00 44.83 2.12
230 231 2.314256 CGGAGCCATGTGCAGTATG 58.686 57.895 8.58 4.30 44.83 2.39
246 247 4.414852 CAGTATGCACATTTAGCAACACC 58.585 43.478 0.00 0.00 46.27 4.16
247 248 4.078537 AGTATGCACATTTAGCAACACCA 58.921 39.130 0.00 0.00 46.27 4.17
248 249 4.522405 AGTATGCACATTTAGCAACACCAA 59.478 37.500 0.00 0.00 46.27 3.67
249 250 3.808466 TGCACATTTAGCAACACCAAA 57.192 38.095 0.00 0.00 39.39 3.28
250 251 4.128925 TGCACATTTAGCAACACCAAAA 57.871 36.364 0.00 0.00 39.39 2.44
251 252 4.507710 TGCACATTTAGCAACACCAAAAA 58.492 34.783 0.00 0.00 39.39 1.94
252 253 5.121811 TGCACATTTAGCAACACCAAAAAT 58.878 33.333 0.00 0.00 39.39 1.82
253 254 5.007430 TGCACATTTAGCAACACCAAAAATG 59.993 36.000 0.00 0.00 41.23 2.32
254 255 5.007528 GCACATTTAGCAACACCAAAAATGT 59.992 36.000 6.04 6.04 46.33 2.71
255 256 6.458070 GCACATTTAGCAACACCAAAAATGTT 60.458 34.615 8.56 0.00 44.25 2.71
267 268 8.503458 ACACCAAAAATGTTGAATCAAAATCA 57.497 26.923 0.00 0.00 0.00 2.57
268 269 8.954350 ACACCAAAAATGTTGAATCAAAATCAA 58.046 25.926 0.00 0.00 34.56 2.57
269 270 9.784680 CACCAAAAATGTTGAATCAAAATCAAA 57.215 25.926 0.00 0.00 38.44 2.69
271 272 8.960075 CCAAAAATGTTGAATCAAAATCAAAGC 58.040 29.630 0.00 0.00 38.44 3.51
272 273 9.724839 CAAAAATGTTGAATCAAAATCAAAGCT 57.275 25.926 0.00 0.00 38.44 3.74
273 274 9.724839 AAAAATGTTGAATCAAAATCAAAGCTG 57.275 25.926 0.00 0.00 38.44 4.24
274 275 8.665643 AAATGTTGAATCAAAATCAAAGCTGA 57.334 26.923 0.00 0.00 38.44 4.26
275 276 8.842358 AATGTTGAATCAAAATCAAAGCTGAT 57.158 26.923 0.00 0.00 44.54 2.90
283 284 2.927553 ATCAAAGCTGATTCAACCGC 57.072 45.000 0.00 0.00 39.36 5.68
284 285 1.603456 TCAAAGCTGATTCAACCGCA 58.397 45.000 0.00 0.00 0.00 5.69
285 286 1.952990 TCAAAGCTGATTCAACCGCAA 59.047 42.857 0.00 0.00 0.00 4.85
286 287 2.360483 TCAAAGCTGATTCAACCGCAAA 59.640 40.909 0.00 0.00 0.00 3.68
287 288 3.122297 CAAAGCTGATTCAACCGCAAAA 58.878 40.909 0.00 0.00 0.00 2.44
288 289 3.451141 AAGCTGATTCAACCGCAAAAA 57.549 38.095 0.00 0.00 0.00 1.94
339 340 6.986904 AAAATAGAGTAGCCGAAAAAGGAG 57.013 37.500 0.00 0.00 0.00 3.69
340 341 5.678955 AATAGAGTAGCCGAAAAAGGAGT 57.321 39.130 0.00 0.00 0.00 3.85
341 342 3.596310 AGAGTAGCCGAAAAAGGAGTC 57.404 47.619 0.00 0.00 0.00 3.36
342 343 2.897969 AGAGTAGCCGAAAAAGGAGTCA 59.102 45.455 0.00 0.00 0.00 3.41
343 344 3.056465 AGAGTAGCCGAAAAAGGAGTCAG 60.056 47.826 0.00 0.00 0.00 3.51
344 345 2.897969 AGTAGCCGAAAAAGGAGTCAGA 59.102 45.455 0.00 0.00 0.00 3.27
345 346 2.171341 AGCCGAAAAAGGAGTCAGAC 57.829 50.000 0.00 0.00 0.00 3.51
346 347 1.416401 AGCCGAAAAAGGAGTCAGACA 59.584 47.619 2.66 0.00 0.00 3.41
347 348 2.158813 AGCCGAAAAAGGAGTCAGACAA 60.159 45.455 2.66 0.00 0.00 3.18
348 349 2.616842 GCCGAAAAAGGAGTCAGACAAA 59.383 45.455 2.66 0.00 0.00 2.83
349 350 3.066203 GCCGAAAAAGGAGTCAGACAAAA 59.934 43.478 2.66 0.00 0.00 2.44
350 351 4.439563 GCCGAAAAAGGAGTCAGACAAAAA 60.440 41.667 2.66 0.00 0.00 1.94
368 369 3.974871 AAAAGAGCGCCGTTTTTAAGA 57.025 38.095 2.29 0.00 0.00 2.10
369 370 3.537793 AAAGAGCGCCGTTTTTAAGAG 57.462 42.857 2.29 0.00 0.00 2.85
370 371 1.439679 AGAGCGCCGTTTTTAAGAGG 58.560 50.000 2.29 0.00 0.00 3.69
371 372 0.179197 GAGCGCCGTTTTTAAGAGGC 60.179 55.000 2.29 0.00 45.67 4.70
372 373 0.605589 AGCGCCGTTTTTAAGAGGCT 60.606 50.000 2.29 0.00 46.85 4.58
373 374 1.081094 GCGCCGTTTTTAAGAGGCTA 58.919 50.000 0.00 0.00 46.85 3.93
374 375 1.062148 GCGCCGTTTTTAAGAGGCTAG 59.938 52.381 0.00 0.00 46.85 3.42
375 376 2.613691 CGCCGTTTTTAAGAGGCTAGA 58.386 47.619 0.00 0.00 46.85 2.43
376 377 2.347755 CGCCGTTTTTAAGAGGCTAGAC 59.652 50.000 0.00 0.00 46.85 2.59
377 378 3.332034 GCCGTTTTTAAGAGGCTAGACA 58.668 45.455 0.00 0.00 45.67 3.41
378 379 3.371285 GCCGTTTTTAAGAGGCTAGACAG 59.629 47.826 0.00 0.00 45.67 3.51
379 380 4.817517 CCGTTTTTAAGAGGCTAGACAGA 58.182 43.478 0.00 0.00 0.00 3.41
380 381 4.626172 CCGTTTTTAAGAGGCTAGACAGAC 59.374 45.833 0.00 0.00 0.00 3.51
381 382 5.227908 CGTTTTTAAGAGGCTAGACAGACA 58.772 41.667 0.00 0.00 28.86 3.41
382 383 5.346281 CGTTTTTAAGAGGCTAGACAGACAG 59.654 44.000 0.00 0.00 28.86 3.51
383 384 6.456501 GTTTTTAAGAGGCTAGACAGACAGA 58.543 40.000 0.00 0.00 28.86 3.41
384 385 6.859112 TTTTAAGAGGCTAGACAGACAGAT 57.141 37.500 0.00 0.00 28.86 2.90
385 386 7.956328 TTTTAAGAGGCTAGACAGACAGATA 57.044 36.000 0.00 0.00 28.86 1.98
386 387 7.956328 TTTAAGAGGCTAGACAGACAGATAA 57.044 36.000 0.00 0.00 28.86 1.75
387 388 7.956328 TTAAGAGGCTAGACAGACAGATAAA 57.044 36.000 0.00 0.00 28.86 1.40
388 389 6.859112 AAGAGGCTAGACAGACAGATAAAA 57.141 37.500 0.00 0.00 28.86 1.52
389 390 6.463995 AGAGGCTAGACAGACAGATAAAAG 57.536 41.667 0.00 0.00 28.86 2.27
390 391 6.191315 AGAGGCTAGACAGACAGATAAAAGA 58.809 40.000 0.00 0.00 28.86 2.52
391 392 6.321181 AGAGGCTAGACAGACAGATAAAAGAG 59.679 42.308 0.00 0.00 28.86 2.85
392 393 6.191315 AGGCTAGACAGACAGATAAAAGAGA 58.809 40.000 0.00 0.00 28.86 3.10
393 394 6.838612 AGGCTAGACAGACAGATAAAAGAGAT 59.161 38.462 0.00 0.00 28.86 2.75
394 395 8.001875 AGGCTAGACAGACAGATAAAAGAGATA 58.998 37.037 0.00 0.00 28.86 1.98
395 396 8.296713 GGCTAGACAGACAGATAAAAGAGATAG 58.703 40.741 0.00 0.00 0.00 2.08
396 397 9.062524 GCTAGACAGACAGATAAAAGAGATAGA 57.937 37.037 0.00 0.00 0.00 1.98
399 400 9.866655 AGACAGACAGATAAAAGAGATAGAGAT 57.133 33.333 0.00 0.00 0.00 2.75
411 412 8.450578 AAAGAGATAGAGATAGATAGGCATCG 57.549 38.462 0.00 0.00 36.20 3.84
412 413 7.136822 AGAGATAGAGATAGATAGGCATCGT 57.863 40.000 0.00 0.00 36.20 3.73
413 414 7.217200 AGAGATAGAGATAGATAGGCATCGTC 58.783 42.308 0.00 0.00 36.20 4.20
414 415 6.894682 AGATAGAGATAGATAGGCATCGTCA 58.105 40.000 0.00 0.00 36.20 4.35
415 416 7.517320 AGATAGAGATAGATAGGCATCGTCAT 58.483 38.462 0.00 0.00 36.20 3.06
416 417 7.661437 AGATAGAGATAGATAGGCATCGTCATC 59.339 40.741 0.00 0.00 36.20 2.92
417 418 5.504853 AGAGATAGATAGGCATCGTCATCA 58.495 41.667 0.00 0.00 36.20 3.07
418 419 5.356751 AGAGATAGATAGGCATCGTCATCAC 59.643 44.000 0.00 0.00 36.20 3.06
420 421 1.063806 GATAGGCATCGTCATCACGC 58.936 55.000 0.00 0.00 46.28 5.34
421 422 0.319900 ATAGGCATCGTCATCACGCC 60.320 55.000 0.00 0.00 46.28 5.68
422 423 2.363711 TAGGCATCGTCATCACGCCC 62.364 60.000 0.00 0.00 46.28 6.13
423 424 3.272334 GCATCGTCATCACGCCCC 61.272 66.667 0.00 0.00 46.28 5.80
424 425 2.961721 CATCGTCATCACGCCCCG 60.962 66.667 0.00 0.00 46.28 5.73
425 426 4.891727 ATCGTCATCACGCCCCGC 62.892 66.667 0.00 0.00 46.28 6.13
434 435 4.868116 ACGCCCCGCACACAGTTT 62.868 61.111 0.00 0.00 0.00 2.66
435 436 4.025401 CGCCCCGCACACAGTTTC 62.025 66.667 0.00 0.00 0.00 2.78
436 437 4.025401 GCCCCGCACACAGTTTCG 62.025 66.667 0.00 0.00 0.00 3.46
437 438 4.025401 CCCCGCACACAGTTTCGC 62.025 66.667 0.00 0.00 0.00 4.70
438 439 4.368808 CCCGCACACAGTTTCGCG 62.369 66.667 0.00 0.00 46.96 5.87
441 442 3.625232 GCACACAGTTTCGCGAGA 58.375 55.556 9.59 0.43 39.20 4.04
442 443 1.488957 GCACACAGTTTCGCGAGAG 59.511 57.895 9.59 3.16 43.69 3.20
443 444 0.939577 GCACACAGTTTCGCGAGAGA 60.940 55.000 9.59 0.00 43.69 3.10
444 445 1.487482 CACACAGTTTCGCGAGAGAA 58.513 50.000 9.59 0.00 43.69 2.87
445 446 1.190323 CACACAGTTTCGCGAGAGAAC 59.810 52.381 9.59 11.65 43.69 3.01
446 447 1.202371 ACACAGTTTCGCGAGAGAACA 60.202 47.619 20.70 0.00 43.69 3.18
447 448 1.453524 CACAGTTTCGCGAGAGAACAG 59.546 52.381 20.70 16.12 43.69 3.16
462 463 3.699894 CAGGCCACTGGTCGAGCT 61.700 66.667 16.64 0.00 41.13 4.09
640 644 0.249489 CGCTTCCGAAGATACCCCTG 60.249 60.000 12.54 0.00 36.29 4.45
660 664 2.047274 TCCGAGAGCAAAAGGGCG 60.047 61.111 0.00 0.00 39.27 6.13
691 862 4.456806 GCGGTGAGGGCGAATTAT 57.543 55.556 0.00 0.00 0.00 1.28
703 874 3.612423 GGGCGAATTATTTCAGTTGCAAC 59.388 43.478 22.17 22.17 0.00 4.17
731 1304 1.995646 GCGTCTCCTTCCTCTCCGTC 61.996 65.000 0.00 0.00 0.00 4.79
732 1305 0.393267 CGTCTCCTTCCTCTCCGTCT 60.393 60.000 0.00 0.00 0.00 4.18
733 1306 1.385528 GTCTCCTTCCTCTCCGTCTC 58.614 60.000 0.00 0.00 0.00 3.36
734 1307 0.256464 TCTCCTTCCTCTCCGTCTCC 59.744 60.000 0.00 0.00 0.00 3.71
735 1308 1.077644 TCCTTCCTCTCCGTCTCCG 60.078 63.158 0.00 0.00 0.00 4.63
736 1309 1.378778 CCTTCCTCTCCGTCTCCGT 60.379 63.158 0.00 0.00 0.00 4.69
741 1314 3.102107 CTCTCCGTCTCCGTGCGAG 62.102 68.421 0.00 0.00 40.30 5.03
776 1349 1.597854 CCAGAGCGGAACAGCACAA 60.598 57.895 0.00 0.00 40.15 3.33
783 1359 1.380403 CGGAACAGCACAACACCCAA 61.380 55.000 0.00 0.00 0.00 4.12
794 1370 1.619827 CAACACCCAACATCAATGGCT 59.380 47.619 0.00 0.00 36.58 4.75
860 1454 1.030488 CATGGAGGAGTTGCTGGCTG 61.030 60.000 0.00 0.00 0.00 4.85
864 1458 1.835927 GAGGAGTTGCTGGCTGACCT 61.836 60.000 0.00 0.00 36.63 3.85
865 1459 1.073897 GGAGTTGCTGGCTGACCTT 59.926 57.895 0.00 0.00 36.63 3.50
866 1460 0.324943 GGAGTTGCTGGCTGACCTTA 59.675 55.000 0.00 0.00 36.63 2.69
867 1461 1.271379 GGAGTTGCTGGCTGACCTTAA 60.271 52.381 0.00 0.00 36.63 1.85
868 1462 2.619074 GGAGTTGCTGGCTGACCTTAAT 60.619 50.000 0.00 0.00 36.63 1.40
869 1463 3.084786 GAGTTGCTGGCTGACCTTAATT 58.915 45.455 0.00 0.00 36.63 1.40
871 1465 2.558359 GTTGCTGGCTGACCTTAATTGT 59.442 45.455 0.00 0.00 36.63 2.71
872 1466 2.161855 TGCTGGCTGACCTTAATTGTG 58.838 47.619 0.00 0.00 36.63 3.33
874 1468 2.095059 GCTGGCTGACCTTAATTGTGTG 60.095 50.000 0.00 0.00 36.63 3.82
875 1469 1.885887 TGGCTGACCTTAATTGTGTGC 59.114 47.619 0.00 0.00 36.63 4.57
876 1470 2.162681 GGCTGACCTTAATTGTGTGCT 58.837 47.619 0.00 0.00 0.00 4.40
878 1472 3.568538 GCTGACCTTAATTGTGTGCTTG 58.431 45.455 0.00 0.00 0.00 4.01
893 1498 1.492993 GCTTGGTTCCTGTCCCTCCT 61.493 60.000 0.00 0.00 0.00 3.69
945 1550 1.336755 GCACCAATTGACGAACCAGTT 59.663 47.619 7.12 0.00 0.00 3.16
1056 1663 3.823330 GGTGGAGACGACGGCGAT 61.823 66.667 22.49 4.82 41.64 4.58
1057 1664 2.579787 GTGGAGACGACGGCGATG 60.580 66.667 22.49 7.88 41.64 3.84
1086 1693 3.564027 CGCTTGGATTCGCGGACC 61.564 66.667 6.13 8.26 45.17 4.46
1152 1759 4.771356 TTCGACTTCGGCGCGGAG 62.771 66.667 17.51 11.47 38.61 4.63
1206 1813 3.842923 CGCGCTGATCCAGGAGGT 61.843 66.667 5.56 0.00 35.89 3.85
1373 2097 9.772973 TCTACTTCTGTATTTGTCTTTTGCTAA 57.227 29.630 0.00 0.00 0.00 3.09
1448 2172 5.974108 TGGAGTAGTATTTAGAACAGCACC 58.026 41.667 0.00 0.00 0.00 5.01
1486 2210 3.103742 TGTGCATACATCTCACTGGGTA 58.896 45.455 0.00 0.00 0.00 3.69
1487 2211 3.118775 TGTGCATACATCTCACTGGGTAC 60.119 47.826 0.00 0.00 0.00 3.34
1488 2212 3.103742 TGCATACATCTCACTGGGTACA 58.896 45.455 0.00 0.00 0.00 2.90
1489 2213 3.711190 TGCATACATCTCACTGGGTACAT 59.289 43.478 0.00 0.00 0.00 2.29
1490 2214 4.898861 TGCATACATCTCACTGGGTACATA 59.101 41.667 0.00 0.00 0.00 2.29
1524 2248 7.472945 GCCAGTTAGGTCAGGTGTATGTATAAT 60.473 40.741 0.00 0.00 40.61 1.28
1530 2254 6.385759 AGGTCAGGTGTATGTATAATGGACAA 59.614 38.462 0.00 0.00 0.00 3.18
1532 2256 6.202954 GTCAGGTGTATGTATAATGGACAAGC 59.797 42.308 0.00 0.00 0.00 4.01
1533 2257 6.054941 CAGGTGTATGTATAATGGACAAGCA 58.945 40.000 0.00 0.00 0.00 3.91
1535 2259 7.229306 CAGGTGTATGTATAATGGACAAGCATT 59.771 37.037 0.00 0.00 0.00 3.56
1562 2353 7.995463 TTAATTGTTTGTAAGACTGGTTTGC 57.005 32.000 0.00 0.00 0.00 3.68
1612 2404 1.795768 CCTCAACTAGCTTGTCGCAA 58.204 50.000 0.07 0.00 42.61 4.85
1678 2470 5.344884 ACTTGTCCAAACGTAAAAATGTGG 58.655 37.500 0.00 0.00 0.00 4.17
1679 2471 4.985538 TGTCCAAACGTAAAAATGTGGT 57.014 36.364 0.00 0.00 0.00 4.16
1698 2490 2.474816 GTGTGCCTCCGTTCATATCTC 58.525 52.381 0.00 0.00 0.00 2.75
1705 2497 3.004419 CCTCCGTTCATATCTCAGCGTAA 59.996 47.826 0.00 0.00 0.00 3.18
1788 2715 4.969196 CGCTGGCTCCGTGTGTGT 62.969 66.667 0.00 0.00 0.00 3.72
1921 3274 9.001542 CATATGTTCAACATGTTTTGGGAAAAT 57.998 29.630 13.65 11.93 39.53 1.82
1981 3334 8.523523 TTGAAAGATGTTTGTCATGCATTTAG 57.476 30.769 0.00 0.00 36.83 1.85
1988 3341 9.962759 GATGTTTGTCATGCATTTAGAAAATTC 57.037 29.630 0.00 0.00 36.83 2.17
2046 3402 8.301252 ACCTTACATTTCTACAAACACCTTTT 57.699 30.769 0.00 0.00 0.00 2.27
2101 3493 9.777297 ACAAAATTTTAATACAAGGCTGTCAAT 57.223 25.926 2.44 0.00 36.96 2.57
2182 3576 1.808945 GTGCTTGTGGTCCTGAATGAG 59.191 52.381 0.00 0.00 0.00 2.90
2242 3636 8.960075 CGTTAAACTGTTTTAAACCCACATAAG 58.040 33.333 11.48 0.00 38.60 1.73
2286 3687 9.654663 GTTTACCTCTTCAAACTACATAGTCAT 57.345 33.333 0.00 0.00 34.99 3.06
2332 3733 7.290857 CACTCGCAGTGTATGTATTTAACTT 57.709 36.000 7.80 0.00 41.19 2.66
2695 4096 7.651808 CAGAAACATTTTCCAGAGCTTCTTTA 58.348 34.615 0.00 0.00 0.00 1.85
2712 4140 9.050601 AGCTTCTTTAACTAGTGCATTCATATC 57.949 33.333 0.00 0.00 0.00 1.63
2856 4525 1.047002 TGGGGGTTGCAATTTGTCAG 58.953 50.000 0.59 0.00 0.00 3.51
2889 5924 1.222387 CGGGGCCGGTGAATAAAGA 59.778 57.895 1.90 0.00 35.56 2.52
2916 5951 2.092049 TCCGTATGGAGTAAGGCTCTCA 60.092 50.000 0.00 0.00 43.62 3.27
2970 6005 7.753309 TTTAGGTGTATTTTGCAAGCTAAGA 57.247 32.000 0.00 0.00 34.96 2.10
2976 6011 5.943416 TGTATTTTGCAAGCTAAGAGCCTAA 59.057 36.000 0.00 0.00 43.77 2.69
2977 6012 6.603201 TGTATTTTGCAAGCTAAGAGCCTAAT 59.397 34.615 0.00 0.00 43.77 1.73
3162 6642 1.486211 TTAGGGTGTGAGAGCTAGCC 58.514 55.000 12.13 2.81 0.00 3.93
3257 6740 5.450965 GGCCAAATCCATGTATTGAAGTGAG 60.451 44.000 0.00 0.00 0.00 3.51
3288 6771 7.017651 CCCATATAGGACCATCCTTAAAGAACT 59.982 40.741 1.99 0.00 46.91 3.01
3331 6814 4.239428 TCAGGAAATTGATGCCATGAGA 57.761 40.909 0.00 0.00 0.00 3.27
3372 6855 2.325082 CCTTCGAAGCAACACCGGG 61.325 63.158 19.99 0.00 0.00 5.73
3406 6891 0.389296 TGATGTAGTGGCCGTGAACG 60.389 55.000 0.00 0.00 39.44 3.95
3408 6893 0.034337 ATGTAGTGGCCGTGAACGTT 59.966 50.000 0.00 0.00 37.74 3.99
3422 6907 1.104577 AACGTTTTGGTCGGTGCCAT 61.105 50.000 0.00 0.00 38.48 4.40
3454 6939 5.310409 AGGAAAACAGATTGTCTCTCCAA 57.690 39.130 0.00 0.00 29.61 3.53
3481 6977 1.822371 TGACGAAGATGGATCGGTTCA 59.178 47.619 0.00 0.00 44.32 3.18
3534 7030 0.032952 TGAACCTGGTCGAAGTTCGG 59.967 55.000 24.18 10.77 42.22 4.30
3601 7097 2.239907 GGTTGGCTGGTAGAAGAAGGAT 59.760 50.000 0.00 0.00 0.00 3.24
3636 7132 5.872963 AGACATGAAGCATGCCATCTATTA 58.127 37.500 15.66 0.00 44.80 0.98
3650 7146 4.537015 CATCTATTACACTCGATGACGCA 58.463 43.478 0.00 0.00 36.29 5.24
3670 7166 1.593196 TTCGAAGACCACCTGCAAAG 58.407 50.000 0.00 0.00 34.32 2.77
3671 7167 0.468226 TCGAAGACCACCTGCAAAGT 59.532 50.000 0.00 0.00 0.00 2.66
3696 7216 2.158986 CCGAGAGAGCAATGACCAGAAT 60.159 50.000 0.00 0.00 0.00 2.40
3697 7217 3.529533 CGAGAGAGCAATGACCAGAATT 58.470 45.455 0.00 0.00 0.00 2.17
3783 7303 1.378911 GCTGCCACCACCATCATCA 60.379 57.895 0.00 0.00 0.00 3.07
3822 7447 7.982761 ACAAACCATAAATACAACTCGGTAA 57.017 32.000 0.00 0.00 0.00 2.85
3904 7529 1.476085 CGGCATAGAAATTTGGGCACA 59.524 47.619 0.00 0.00 0.00 4.57
3919 7545 1.812571 GGCACAAAGGATACCACTGTG 59.187 52.381 13.93 13.93 39.65 3.66
3920 7546 2.552155 GGCACAAAGGATACCACTGTGA 60.552 50.000 19.19 0.00 39.28 3.58
3945 7571 8.140112 AGACTATAGAAATGAAGTTGGACACT 57.860 34.615 6.78 0.00 37.30 3.55
4006 7635 1.954382 CCATGATGCTCTCCATGTTGG 59.046 52.381 0.00 0.00 38.69 3.77
4007 7636 2.651455 CATGATGCTCTCCATGTTGGT 58.349 47.619 0.00 0.00 39.03 3.67
4008 7637 2.118313 TGATGCTCTCCATGTTGGTG 57.882 50.000 0.00 0.00 39.03 4.17
4019 7648 1.745087 CATGTTGGTGTACCCATGCTC 59.255 52.381 4.19 0.00 44.74 4.26
4033 7662 1.171308 ATGCTCCACATGTGTGCTTC 58.829 50.000 28.78 14.54 44.34 3.86
4053 7682 8.573885 GTGCTTCCTAACCTAGTTTAACATTTT 58.426 33.333 0.00 0.00 0.00 1.82
4156 7787 1.073125 TGACATGGATTTGGGTGTCGT 59.927 47.619 0.00 0.00 42.86 4.34
4260 7900 6.756074 TCCATTTGTTTGTGTCTTGTGAATTC 59.244 34.615 0.00 0.00 0.00 2.17
4262 7902 7.043192 CCATTTGTTTGTGTCTTGTGAATTCTC 60.043 37.037 7.05 3.61 0.00 2.87
4282 7922 5.976458 TCTCATGCACATGACACTTACATA 58.024 37.500 9.23 0.00 42.42 2.29
4406 8046 8.690884 TCATATTCAACAACAAAAGTTGGAGAA 58.309 29.630 12.36 13.93 44.84 2.87
4410 8050 6.696411 TCAACAACAAAAGTTGGAGAATTGT 58.304 32.000 12.36 0.00 44.84 2.71
4455 8095 2.046285 CGAAGTTGGTGCCCATCCC 61.046 63.158 0.00 0.00 31.53 3.85
4510 8150 3.687212 CGATGCCATTGTGGTTACTTACA 59.313 43.478 0.00 0.00 40.46 2.41
4547 8187 7.503521 TTACTCATCTGTAGAGTAGCATCAG 57.496 40.000 0.00 0.00 46.05 2.90
4553 8193 3.696548 CTGTAGAGTAGCATCAGTGGTCA 59.303 47.826 0.00 0.00 37.28 4.02
4603 8243 1.095228 CGCCCATGGATGTGGTGTAC 61.095 60.000 15.22 0.00 37.57 2.90
4654 8296 7.543947 TTGTCAAACATGAGATATAGCACTG 57.456 36.000 0.00 0.00 0.00 3.66
4666 8308 9.230122 TGAGATATAGCACTGAAATTCAAAACA 57.770 29.630 0.00 0.00 0.00 2.83
4704 8346 9.773328 TCATATTCGTAAATGAAAGCTTGAAAG 57.227 29.630 0.00 0.00 0.00 2.62
4742 8384 3.244770 ACCAAGGAACAATTCGGAAGCTA 60.245 43.478 0.00 0.00 0.00 3.32
4887 8530 5.469373 TTATCTGTATCTTGCAAAGCACG 57.531 39.130 0.00 0.00 45.70 5.34
4931 8574 1.134491 CGGAGGTGATACAAGGTTCCC 60.134 57.143 0.00 0.00 0.00 3.97
4943 8586 0.916086 AGGTTCCCGTGCCATATTCA 59.084 50.000 0.00 0.00 0.00 2.57
4980 8623 6.039616 GGCAAATAACGCTCAAATCCAATTA 58.960 36.000 0.00 0.00 0.00 1.40
4989 8632 6.379988 ACGCTCAAATCCAATTAAAATAGGGT 59.620 34.615 0.00 0.00 0.00 4.34
4990 8633 6.697019 CGCTCAAATCCAATTAAAATAGGGTG 59.303 38.462 0.00 0.00 0.00 4.61
4991 8634 7.555965 GCTCAAATCCAATTAAAATAGGGTGT 58.444 34.615 0.00 0.00 0.00 4.16
4993 8636 9.586435 CTCAAATCCAATTAAAATAGGGTGTTC 57.414 33.333 0.00 0.00 0.00 3.18
5069 8714 8.461222 CAAGTCAAAAGTCATTATCCATGCTAA 58.539 33.333 0.00 0.00 32.13 3.09
5082 8727 2.669781 CATGCTAATGGGGATGGTTGT 58.330 47.619 0.00 0.00 32.58 3.32
5131 8776 7.362662 CAATGTGCTTGTTTAACTAGTGTGAT 58.637 34.615 8.18 0.00 0.00 3.06
5133 8778 5.820423 TGTGCTTGTTTAACTAGTGTGATGT 59.180 36.000 8.18 0.00 0.00 3.06
5230 9186 2.027469 ACATTTCTTCGGAGGTGGTACC 60.027 50.000 4.43 4.43 38.99 3.34
5241 9197 1.640670 AGGTGGTACCCGGTTCTAGTA 59.359 52.381 10.07 0.00 39.75 1.82
5313 9269 2.775384 TCAGGCGGTCCTATTTGGTAAT 59.225 45.455 0.00 0.00 41.93 1.89
5350 9306 9.177608 CATAAAGGTCTATCATTGAGGAACAAA 57.822 33.333 9.22 0.00 42.03 2.83
5419 9375 1.061411 CTTGCGATGGTGATGTGCG 59.939 57.895 0.00 0.00 0.00 5.34
5454 9410 8.800231 TGTATGACATTCAATTGTTTGACAAG 57.200 30.769 14.46 0.00 41.94 3.16
5490 9446 7.285566 ACACATGCCATTTCTCTATATCTTGT 58.714 34.615 0.00 0.00 0.00 3.16
5563 9520 6.317789 TCAGTGCCTTATTTGACAAGAAAG 57.682 37.500 5.16 5.16 0.00 2.62
5589 9546 2.762327 GGACATGGAAAATGGCACTCAT 59.238 45.455 0.00 0.00 37.79 2.90
5672 9629 7.645058 CTATTGTGGAGGTACAATGGAAAAT 57.355 36.000 12.84 0.00 46.34 1.82
5673 9630 5.720371 TTGTGGAGGTACAATGGAAAATG 57.280 39.130 0.00 0.00 35.75 2.32
5674 9631 4.085733 TGTGGAGGTACAATGGAAAATGG 58.914 43.478 0.00 0.00 0.00 3.16
5675 9632 3.096092 TGGAGGTACAATGGAAAATGGC 58.904 45.455 0.00 0.00 0.00 4.40
5676 9633 3.096092 GGAGGTACAATGGAAAATGGCA 58.904 45.455 0.00 0.00 0.00 4.92
5677 9634 3.119137 GGAGGTACAATGGAAAATGGCAC 60.119 47.826 0.00 0.00 0.00 5.01
5678 9635 3.763897 GAGGTACAATGGAAAATGGCACT 59.236 43.478 0.00 0.00 0.00 4.40
5679 9636 3.763897 AGGTACAATGGAAAATGGCACTC 59.236 43.478 0.00 0.00 0.00 3.51
5680 9637 3.509575 GGTACAATGGAAAATGGCACTCA 59.490 43.478 0.00 0.00 0.00 3.41
5681 9638 4.160252 GGTACAATGGAAAATGGCACTCAT 59.840 41.667 0.00 0.00 37.79 2.90
5682 9639 4.196626 ACAATGGAAAATGGCACTCATG 57.803 40.909 0.00 0.00 35.99 3.07
5683 9640 3.579586 ACAATGGAAAATGGCACTCATGT 59.420 39.130 0.00 0.00 35.99 3.21
5684 9641 4.771577 ACAATGGAAAATGGCACTCATGTA 59.228 37.500 0.00 0.00 35.99 2.29
5685 9642 5.422970 ACAATGGAAAATGGCACTCATGTAT 59.577 36.000 0.00 0.00 35.99 2.29
5686 9643 4.987408 TGGAAAATGGCACTCATGTATG 57.013 40.909 0.00 0.00 35.99 2.39
5687 9644 4.598022 TGGAAAATGGCACTCATGTATGA 58.402 39.130 0.00 0.00 35.99 2.15
5688 9645 4.398988 TGGAAAATGGCACTCATGTATGAC 59.601 41.667 0.00 1.09 35.99 3.06
5689 9646 4.398988 GGAAAATGGCACTCATGTATGACA 59.601 41.667 9.47 9.47 38.50 3.58
5690 9647 5.105797 GGAAAATGGCACTCATGTATGACAA 60.106 40.000 10.83 0.00 37.40 3.18
5691 9648 5.981088 AAATGGCACTCATGTATGACAAA 57.019 34.783 10.83 0.00 37.40 2.83
5692 9649 5.571784 AATGGCACTCATGTATGACAAAG 57.428 39.130 10.83 0.00 37.40 2.77
5693 9650 4.284829 TGGCACTCATGTATGACAAAGA 57.715 40.909 5.19 0.00 28.30 2.52
5694 9651 4.847198 TGGCACTCATGTATGACAAAGAT 58.153 39.130 5.19 0.00 28.30 2.40
5695 9652 5.255687 TGGCACTCATGTATGACAAAGATT 58.744 37.500 5.19 0.00 28.30 2.40
5696 9653 5.711506 TGGCACTCATGTATGACAAAGATTT 59.288 36.000 5.19 0.00 28.30 2.17
5697 9654 6.032094 GGCACTCATGTATGACAAAGATTTG 58.968 40.000 3.79 3.79 43.62 2.32
5698 9655 6.032094 GCACTCATGTATGACAAAGATTTGG 58.968 40.000 9.91 0.00 42.34 3.28
5699 9656 6.558009 CACTCATGTATGACAAAGATTTGGG 58.442 40.000 9.91 0.00 42.34 4.12
5700 9657 6.151648 CACTCATGTATGACAAAGATTTGGGT 59.848 38.462 9.91 0.00 42.34 4.51
5701 9658 6.721208 ACTCATGTATGACAAAGATTTGGGTT 59.279 34.615 9.91 0.00 42.34 4.11
5702 9659 6.923012 TCATGTATGACAAAGATTTGGGTTG 58.077 36.000 9.91 0.00 42.34 3.77
5703 9660 5.132897 TGTATGACAAAGATTTGGGTTGC 57.867 39.130 9.91 0.00 42.34 4.17
5704 9661 3.683365 ATGACAAAGATTTGGGTTGCC 57.317 42.857 9.91 0.00 42.34 4.52
5705 9662 1.339610 TGACAAAGATTTGGGTTGCCG 59.660 47.619 9.91 0.00 42.34 5.69
5706 9663 0.033366 ACAAAGATTTGGGTTGCCGC 59.967 50.000 9.91 0.00 42.34 6.53
5707 9664 0.033228 CAAAGATTTGGGTTGCCGCA 59.967 50.000 0.00 0.00 34.59 5.69
5708 9665 0.975887 AAAGATTTGGGTTGCCGCAT 59.024 45.000 0.00 0.00 33.04 4.73
5709 9666 0.975887 AAGATTTGGGTTGCCGCATT 59.024 45.000 0.00 0.00 33.04 3.56
5710 9667 0.975887 AGATTTGGGTTGCCGCATTT 59.024 45.000 0.00 0.00 33.04 2.32
5711 9668 1.077915 GATTTGGGTTGCCGCATTTG 58.922 50.000 0.00 0.00 33.04 2.32
5712 9669 0.321475 ATTTGGGTTGCCGCATTTGG 60.321 50.000 0.00 0.00 33.04 3.28
5748 9705 2.586258 CCTGTCGAGGTCTATTGTGG 57.414 55.000 0.00 0.00 34.16 4.17
5749 9706 2.100197 CCTGTCGAGGTCTATTGTGGA 58.900 52.381 0.00 0.00 34.16 4.02
5750 9707 2.099921 CCTGTCGAGGTCTATTGTGGAG 59.900 54.545 0.00 0.00 34.16 3.86
5751 9708 2.099921 CTGTCGAGGTCTATTGTGGAGG 59.900 54.545 0.00 0.00 0.00 4.30
5752 9709 2.100989 GTCGAGGTCTATTGTGGAGGT 58.899 52.381 0.00 0.00 0.00 3.85
5753 9710 3.285484 GTCGAGGTCTATTGTGGAGGTA 58.715 50.000 0.00 0.00 0.00 3.08
5754 9711 3.066481 GTCGAGGTCTATTGTGGAGGTAC 59.934 52.174 0.00 0.00 0.00 3.34
5755 9712 3.021695 CGAGGTCTATTGTGGAGGTACA 58.978 50.000 0.00 0.00 0.00 2.90
5756 9713 3.446161 CGAGGTCTATTGTGGAGGTACAA 59.554 47.826 0.00 0.00 43.93 2.41
5759 9716 4.844655 AGGTCTATTGTGGAGGTACAAGTT 59.155 41.667 0.00 0.00 43.14 2.66
5827 9784 7.065803 GTGTACCTTGTATCACATATGTGCTTT 59.934 37.037 27.71 17.69 45.25 3.51
5887 9844 4.593597 CATCAATGCTTTGCCATTTCAC 57.406 40.909 7.44 0.00 33.35 3.18
5896 9853 4.084900 GCTTTGCCATTTCACTTTTTCTCG 60.085 41.667 0.00 0.00 0.00 4.04
5959 9916 5.874810 TGGTACATGTCTTCAGCAACTTATC 59.125 40.000 0.00 0.00 0.00 1.75
5971 9928 7.227049 TCAGCAACTTATCCGACATGATATA 57.773 36.000 0.00 0.00 0.00 0.86
6066 12019 9.113838 ACATAGTACATGATTTTTCTGCCTTAG 57.886 33.333 0.00 0.00 0.00 2.18
6100 12053 3.838244 TGGACTCTGCAAGTAACACTT 57.162 42.857 2.17 0.00 39.39 3.16
6103 12056 5.297547 TGGACTCTGCAAGTAACACTTAAG 58.702 41.667 0.00 0.00 36.03 1.85
6139 12092 4.094887 CGAATTTGGGCTATCATATTCGGG 59.905 45.833 20.45 6.22 45.59 5.14
6196 12158 5.707242 GATTGTCATCGACCATCCTAGTA 57.293 43.478 0.00 0.00 31.25 1.82
6202 12164 4.019950 TCATCGACCATCCTAGTACCGATA 60.020 45.833 0.00 0.00 34.15 2.92
6213 12175 5.895534 TCCTAGTACCGATAGTCACCATTTT 59.104 40.000 0.00 0.00 0.00 1.82
6231 12193 7.864108 CCATTTTGGTGTATCTTAGTGATGA 57.136 36.000 0.00 0.00 33.02 2.92
6324 12286 4.275196 CCGTAGAGGTCTAAATCATCACGA 59.725 45.833 0.00 0.00 34.51 4.35
6346 12308 5.413309 AAACAAGTTTGACATTGTTGGGA 57.587 34.783 6.45 0.00 46.16 4.37
6393 12356 0.940126 GTAGACCTTGCGATGCCATG 59.060 55.000 0.00 0.00 0.00 3.66
6570 12537 3.366724 CGAGTAACAAGCTAAATGACGCA 59.633 43.478 0.00 0.00 0.00 5.24
6576 12543 0.174845 AGCTAAATGACGCACGCCTA 59.825 50.000 0.00 0.00 0.00 3.93
6599 12566 1.127951 GGCCACGACGTTCAACATTAG 59.872 52.381 0.00 0.00 0.00 1.73
6605 12572 5.305812 CACGACGTTCAACATTAGATTGTC 58.694 41.667 0.00 0.00 0.00 3.18
6660 12627 7.221452 ACAGTATTCCGTTTTCGTGACATATAC 59.779 37.037 0.00 0.00 42.35 1.47
6729 12697 3.664240 GGGGGTGGTTTACTTGGAG 57.336 57.895 0.00 0.00 0.00 3.86
6731 12699 1.639108 GGGGGTGGTTTACTTGGAGAT 59.361 52.381 0.00 0.00 0.00 2.75
6737 12705 4.082733 GGTGGTTTACTTGGAGATCAAAGC 60.083 45.833 0.00 0.00 34.56 3.51
6753 12721 0.112995 AAGCTTGGCAAGGATGTCCA 59.887 50.000 27.25 0.00 38.89 4.02
6763 12731 0.327924 AGGATGTCCAATCAACGCCA 59.672 50.000 1.30 0.00 38.89 5.69
6764 12732 1.173043 GGATGTCCAATCAACGCCAA 58.827 50.000 0.00 0.00 35.64 4.52
6777 12745 1.851658 ACGCCAAAGATGTTTGTTGC 58.148 45.000 13.69 9.84 41.44 4.17
6820 12788 1.321474 CGCACCAAGGATGCCATATT 58.679 50.000 0.00 0.00 40.09 1.28
6827 12795 3.890756 CCAAGGATGCCATATTAAGCACA 59.109 43.478 0.00 0.00 42.84 4.57
6912 12880 2.665649 TAGCATTCGAATCCACACGT 57.334 45.000 7.92 0.00 0.00 4.49
6913 12881 1.078709 AGCATTCGAATCCACACGTG 58.921 50.000 15.48 15.48 0.00 4.49
6983 12970 9.988350 CCAAGTACACTTATATTGTGATTGTTC 57.012 33.333 13.28 0.00 38.65 3.18
7049 13039 2.504032 CACCACCACCACGTGTCT 59.496 61.111 15.65 0.00 31.47 3.41
7111 13101 2.800629 GCAAGTGAGCAAAGCAACACAT 60.801 45.455 16.65 6.66 39.21 3.21
7143 13133 1.003812 CGACCAGATACCCCCAAAACA 59.996 52.381 0.00 0.00 0.00 2.83
7263 13253 8.220755 TGTGTTACTCCTTGATAAATTATGCC 57.779 34.615 0.00 0.00 0.00 4.40
7425 14342 6.037172 CCATGCAGTTACAGTATTTGTCCTAC 59.963 42.308 0.00 0.00 41.29 3.18
7446 14363 6.551601 CCTACTGAATATGTCCTAGAACAGGT 59.448 42.308 0.00 0.00 45.71 4.00
7540 16420 7.173390 GGACTGTTCTATATATGCCTTTGTTCC 59.827 40.741 0.00 0.00 0.00 3.62
7664 16548 3.118629 TGTCATCAGCTATTGTGTCCTCC 60.119 47.826 0.00 0.00 0.00 4.30
7677 16561 1.006043 TGTCCTCCTCTCAGGGTACAG 59.994 57.143 0.00 0.00 35.59 2.74
7736 16620 0.250295 TGGCAACCACTTCTTCTCCG 60.250 55.000 0.00 0.00 0.00 4.63
7753 16640 1.440060 CGGCACCAGCGGTAATAGA 59.560 57.895 0.00 0.00 43.41 1.98
8044 16974 1.671054 CATCGCCCAAGTGTTCCGT 60.671 57.895 0.00 0.00 0.00 4.69
8063 16993 0.036164 TGTGTGGCCTCAGCGTTAAT 59.964 50.000 7.99 0.00 41.24 1.40
8077 17008 4.391830 CAGCGTTAATCTTAGCTTGGAACA 59.608 41.667 0.00 0.00 37.94 3.18
8110 17049 8.394971 TCATTGTGAGAATGTATCTGTGTTTT 57.605 30.769 2.11 0.00 38.96 2.43
8130 17069 9.672086 GTGTTTTAGACTTTACATTACAATGCA 57.328 29.630 1.84 0.00 40.04 3.96
8174 17149 0.109532 TGGGAGATTTGGTCGTGCAA 59.890 50.000 0.00 0.00 0.00 4.08
8259 17249 9.886132 GTTTCCTATACTGTTTTATCTTCCAGA 57.114 33.333 0.00 0.00 0.00 3.86
8281 17272 6.927936 CAGACAGCAGCTTATCATGTAAGTAT 59.072 38.462 0.00 4.31 0.00 2.12
8284 17275 5.699915 CAGCAGCTTATCATGTAAGTATGCT 59.300 40.000 23.99 23.99 43.57 3.79
8302 17293 2.094338 TGCTTGCATGACACACAAACAA 60.094 40.909 3.33 0.00 0.00 2.83
8322 17313 1.021968 AAAATTGGATACCGAGCGGC 58.978 50.000 9.14 0.00 39.32 6.53
8325 17316 0.108585 ATTGGATACCGAGCGGCATT 59.891 50.000 9.14 0.00 39.32 3.56
8413 17406 6.827727 ACGCTCAAGGTATACTAAAATGGAT 58.172 36.000 2.25 0.00 0.00 3.41
8456 17449 3.569194 ATCCGTAATTGTGGCATGGTA 57.431 42.857 0.00 0.00 0.00 3.25
8478 17471 4.860022 AGTAACCATCTATTGCTTGCCTT 58.140 39.130 0.00 0.00 0.00 4.35
8495 17488 2.553247 GCCTTGAGAGGTAGCTGGTTTT 60.553 50.000 0.00 0.00 45.44 2.43
8505 17498 4.786454 AGGTAGCTGGTTTTAGTCCCATTA 59.214 41.667 0.00 0.00 0.00 1.90
8547 17540 8.543774 ACTTTCCAGAATATGTAACTCATGACT 58.456 33.333 0.00 0.00 37.91 3.41
8550 17543 8.768501 TCCAGAATATGTAACTCATGACTAGT 57.231 34.615 0.00 0.00 37.91 2.57
8551 17544 9.862149 TCCAGAATATGTAACTCATGACTAGTA 57.138 33.333 0.00 0.00 37.91 1.82
8552 17545 9.900710 CCAGAATATGTAACTCATGACTAGTAC 57.099 37.037 0.00 0.00 37.91 2.73
8553 17546 9.900710 CAGAATATGTAACTCATGACTAGTACC 57.099 37.037 0.00 0.00 37.91 3.34
8554 17547 9.642343 AGAATATGTAACTCATGACTAGTACCA 57.358 33.333 0.00 0.00 37.91 3.25
8564 17595 4.267349 TGACTAGTACCACTTTTCTGGC 57.733 45.455 0.00 0.00 34.20 4.85
8568 17599 5.063880 ACTAGTACCACTTTTCTGGCAAAG 58.936 41.667 0.00 0.00 39.35 2.77
8671 17704 6.218746 GGTATTTCTCGATAACCGTGGTAAT 58.781 40.000 0.00 0.00 39.75 1.89
8742 18075 1.971167 GGTCATGGGAGCGCAAACA 60.971 57.895 11.47 5.10 0.00 2.83
8803 18138 2.478292 GTAGGGGGAGAGGAATGTTGA 58.522 52.381 0.00 0.00 0.00 3.18
8857 18192 4.578105 GGATTTTGATCTGATGGGTGAGAC 59.422 45.833 0.00 0.00 0.00 3.36
8874 18209 5.473039 GTGAGACTTCAATGGGGAAATTTG 58.527 41.667 0.00 0.00 34.49 2.32
8875 18210 5.011023 GTGAGACTTCAATGGGGAAATTTGT 59.989 40.000 0.00 0.00 34.49 2.83
8912 18250 3.054361 CCAGGTACCAGACAATTAGGCTT 60.054 47.826 15.94 0.00 27.44 4.35
8918 18256 2.379005 CAGACAATTAGGCTTTCCCCC 58.621 52.381 0.00 0.00 27.44 5.40
8919 18257 1.064685 AGACAATTAGGCTTTCCCCCG 60.065 52.381 0.00 0.00 20.59 5.73
8980 18318 0.465705 CTCGGCCTCTTCTTATGCCA 59.534 55.000 0.00 0.00 44.22 4.92
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.774351 CCTCCCACCCCATCCCTC 60.774 72.222 0.00 0.00 0.00 4.30
1 2 3.300962 TCCTCCCACCCCATCCCT 61.301 66.667 0.00 0.00 0.00 4.20
2 3 2.774351 CTCCTCCCACCCCATCCC 60.774 72.222 0.00 0.00 0.00 3.85
3 4 2.774351 CCTCCTCCCACCCCATCC 60.774 72.222 0.00 0.00 0.00 3.51
4 5 2.774351 CCCTCCTCCCACCCCATC 60.774 72.222 0.00 0.00 0.00 3.51
5 6 4.455137 CCCCTCCTCCCACCCCAT 62.455 72.222 0.00 0.00 0.00 4.00
7 8 2.697929 CTATCCCCTCCTCCCACCCC 62.698 70.000 0.00 0.00 0.00 4.95
8 9 1.152008 CTATCCCCTCCTCCCACCC 60.152 68.421 0.00 0.00 0.00 4.61
9 10 0.494095 ATCTATCCCCTCCTCCCACC 59.506 60.000 0.00 0.00 0.00 4.61
10 11 3.445987 CTTATCTATCCCCTCCTCCCAC 58.554 54.545 0.00 0.00 0.00 4.61
11 12 2.225650 GCTTATCTATCCCCTCCTCCCA 60.226 54.545 0.00 0.00 0.00 4.37
12 13 2.473070 GCTTATCTATCCCCTCCTCCC 58.527 57.143 0.00 0.00 0.00 4.30
13 14 2.473070 GGCTTATCTATCCCCTCCTCC 58.527 57.143 0.00 0.00 0.00 4.30
14 15 2.045186 AGGGCTTATCTATCCCCTCCTC 59.955 54.545 0.00 0.00 44.49 3.71
15 16 2.094171 AGGGCTTATCTATCCCCTCCT 58.906 52.381 0.00 0.00 44.49 3.69
16 17 2.651642 AGGGCTTATCTATCCCCTCC 57.348 55.000 0.00 0.00 44.49 4.30
19 20 0.537653 GCGAGGGCTTATCTATCCCC 59.462 60.000 0.00 0.00 40.97 4.81
31 32 1.656441 CATTAATGGCAGCGAGGGC 59.344 57.895 7.62 0.00 40.37 5.19
32 33 2.334307 CCATTAATGGCAGCGAGGG 58.666 57.895 21.32 0.00 41.75 4.30
42 43 0.586319 CGCACCTACCGCCATTAATG 59.414 55.000 8.58 8.58 0.00 1.90
43 44 0.466543 TCGCACCTACCGCCATTAAT 59.533 50.000 0.00 0.00 0.00 1.40
44 45 0.460635 GTCGCACCTACCGCCATTAA 60.461 55.000 0.00 0.00 0.00 1.40
45 46 1.142314 GTCGCACCTACCGCCATTA 59.858 57.895 0.00 0.00 0.00 1.90
46 47 2.125269 GTCGCACCTACCGCCATT 60.125 61.111 0.00 0.00 0.00 3.16
47 48 4.508128 CGTCGCACCTACCGCCAT 62.508 66.667 0.00 0.00 0.00 4.40
51 52 2.616786 TAATGGCGTCGCACCTACCG 62.617 60.000 20.50 0.00 0.00 4.02
52 53 1.142314 TAATGGCGTCGCACCTACC 59.858 57.895 20.50 0.28 0.00 3.18
53 54 0.179119 AGTAATGGCGTCGCACCTAC 60.179 55.000 20.50 15.19 0.00 3.18
54 55 0.101759 GAGTAATGGCGTCGCACCTA 59.898 55.000 20.50 3.43 0.00 3.08
55 56 1.153628 GAGTAATGGCGTCGCACCT 60.154 57.895 20.50 6.31 0.00 4.00
56 57 2.171725 GGAGTAATGGCGTCGCACC 61.172 63.158 20.50 2.72 0.00 5.01
57 58 1.153628 AGGAGTAATGGCGTCGCAC 60.154 57.895 20.50 8.48 0.00 5.34
58 59 1.153647 CAGGAGTAATGGCGTCGCA 60.154 57.895 20.50 5.66 0.00 5.10
59 60 1.883084 CCAGGAGTAATGGCGTCGC 60.883 63.158 9.22 9.22 0.00 5.19
60 61 0.806102 CACCAGGAGTAATGGCGTCG 60.806 60.000 0.00 0.00 41.87 5.12
61 62 0.462047 CCACCAGGAGTAATGGCGTC 60.462 60.000 0.00 0.00 41.87 5.19
62 63 1.602237 CCACCAGGAGTAATGGCGT 59.398 57.895 0.00 0.00 41.87 5.68
63 64 1.153168 CCCACCAGGAGTAATGGCG 60.153 63.158 0.00 0.00 41.87 5.69
64 65 0.394352 CACCCACCAGGAGTAATGGC 60.394 60.000 0.00 0.00 41.87 4.40
65 66 0.255890 CCACCCACCAGGAGTAATGG 59.744 60.000 0.00 0.00 43.87 3.16
66 67 0.255890 CCCACCCACCAGGAGTAATG 59.744 60.000 0.00 0.00 39.89 1.90
67 68 0.178843 ACCCACCCACCAGGAGTAAT 60.179 55.000 0.00 0.00 39.89 1.89
68 69 0.402272 AACCCACCCACCAGGAGTAA 60.402 55.000 0.00 0.00 39.89 2.24
69 70 1.131303 CAACCCACCCACCAGGAGTA 61.131 60.000 0.00 0.00 39.89 2.59
70 71 2.038762 AACCCACCCACCAGGAGT 60.039 61.111 0.00 0.00 39.89 3.85
71 72 2.436109 CAACCCACCCACCAGGAG 59.564 66.667 0.00 0.00 39.89 3.69
72 73 3.182263 CCAACCCACCCACCAGGA 61.182 66.667 0.00 0.00 39.89 3.86
73 74 4.299796 CCCAACCCACCCACCAGG 62.300 72.222 0.00 0.00 43.78 4.45
74 75 2.994643 GAACCCAACCCACCCACCAG 62.995 65.000 0.00 0.00 0.00 4.00
75 76 3.030611 AACCCAACCCACCCACCA 61.031 61.111 0.00 0.00 0.00 4.17
76 77 2.203582 GAACCCAACCCACCCACC 60.204 66.667 0.00 0.00 0.00 4.61
77 78 2.596338 CGAACCCAACCCACCCAC 60.596 66.667 0.00 0.00 0.00 4.61
78 79 4.589675 GCGAACCCAACCCACCCA 62.590 66.667 0.00 0.00 0.00 4.51
103 104 5.076873 CAAGGAGTAATGGAGGGTGAAAAA 58.923 41.667 0.00 0.00 0.00 1.94
104 105 4.662278 CAAGGAGTAATGGAGGGTGAAAA 58.338 43.478 0.00 0.00 0.00 2.29
105 106 3.561313 GCAAGGAGTAATGGAGGGTGAAA 60.561 47.826 0.00 0.00 0.00 2.69
106 107 2.026262 GCAAGGAGTAATGGAGGGTGAA 60.026 50.000 0.00 0.00 0.00 3.18
107 108 1.559682 GCAAGGAGTAATGGAGGGTGA 59.440 52.381 0.00 0.00 0.00 4.02
108 109 1.561542 AGCAAGGAGTAATGGAGGGTG 59.438 52.381 0.00 0.00 0.00 4.61
109 110 1.840635 GAGCAAGGAGTAATGGAGGGT 59.159 52.381 0.00 0.00 0.00 4.34
110 111 1.202580 CGAGCAAGGAGTAATGGAGGG 60.203 57.143 0.00 0.00 0.00 4.30
111 112 1.757118 TCGAGCAAGGAGTAATGGAGG 59.243 52.381 0.00 0.00 0.00 4.30
112 113 3.526931 TTCGAGCAAGGAGTAATGGAG 57.473 47.619 0.00 0.00 0.00 3.86
113 114 4.487714 AATTCGAGCAAGGAGTAATGGA 57.512 40.909 0.00 0.00 0.00 3.41
114 115 5.123820 TCAAAATTCGAGCAAGGAGTAATGG 59.876 40.000 0.00 0.00 0.00 3.16
115 116 6.128172 ACTCAAAATTCGAGCAAGGAGTAATG 60.128 38.462 8.70 0.00 33.01 1.90
116 117 5.940470 ACTCAAAATTCGAGCAAGGAGTAAT 59.060 36.000 8.70 0.00 33.01 1.89
117 118 5.179368 CACTCAAAATTCGAGCAAGGAGTAA 59.821 40.000 9.72 0.00 33.42 2.24
118 119 4.690748 CACTCAAAATTCGAGCAAGGAGTA 59.309 41.667 9.72 0.00 33.42 2.59
119 120 3.499918 CACTCAAAATTCGAGCAAGGAGT 59.500 43.478 5.05 5.60 34.93 3.85
120 121 3.748048 TCACTCAAAATTCGAGCAAGGAG 59.252 43.478 5.05 4.56 33.58 3.69
121 122 3.738982 TCACTCAAAATTCGAGCAAGGA 58.261 40.909 5.05 0.00 33.58 3.36
122 123 3.120060 CCTCACTCAAAATTCGAGCAAGG 60.120 47.826 5.05 7.76 33.58 3.61
123 124 3.669023 GCCTCACTCAAAATTCGAGCAAG 60.669 47.826 5.05 3.57 33.58 4.01
124 125 2.226437 GCCTCACTCAAAATTCGAGCAA 59.774 45.455 5.05 0.00 33.58 3.91
125 126 1.806542 GCCTCACTCAAAATTCGAGCA 59.193 47.619 5.05 0.00 33.58 4.26
126 127 1.131315 GGCCTCACTCAAAATTCGAGC 59.869 52.381 0.00 0.00 33.58 5.03
127 128 1.394917 CGGCCTCACTCAAAATTCGAG 59.605 52.381 0.00 3.83 36.53 4.04
128 129 1.001520 TCGGCCTCACTCAAAATTCGA 59.998 47.619 0.00 0.00 0.00 3.71
129 130 1.128692 GTCGGCCTCACTCAAAATTCG 59.871 52.381 0.00 0.00 0.00 3.34
130 131 1.128692 CGTCGGCCTCACTCAAAATTC 59.871 52.381 0.00 0.00 0.00 2.17
131 132 1.156736 CGTCGGCCTCACTCAAAATT 58.843 50.000 0.00 0.00 0.00 1.82
132 133 0.673644 CCGTCGGCCTCACTCAAAAT 60.674 55.000 0.00 0.00 0.00 1.82
133 134 1.301401 CCGTCGGCCTCACTCAAAA 60.301 57.895 0.00 0.00 0.00 2.44
134 135 2.342279 CCGTCGGCCTCACTCAAA 59.658 61.111 0.00 0.00 0.00 2.69
135 136 4.373116 GCCGTCGGCCTCACTCAA 62.373 66.667 26.23 0.00 44.06 3.02
145 146 3.487202 CACCATTGTCGCCGTCGG 61.487 66.667 6.99 6.99 36.13 4.79
146 147 3.487202 CCACCATTGTCGCCGTCG 61.487 66.667 0.00 0.00 0.00 5.12
147 148 1.669760 TTCCACCATTGTCGCCGTC 60.670 57.895 0.00 0.00 0.00 4.79
148 149 1.964373 GTTCCACCATTGTCGCCGT 60.964 57.895 0.00 0.00 0.00 5.68
149 150 2.686816 GGTTCCACCATTGTCGCCG 61.687 63.158 0.00 0.00 38.42 6.46
150 151 1.602323 TGGTTCCACCATTGTCGCC 60.602 57.895 0.00 0.00 44.79 5.54
151 152 4.073052 TGGTTCCACCATTGTCGC 57.927 55.556 0.00 0.00 44.79 5.19
159 160 2.241880 CGTCGTGTGTGGTTCCACC 61.242 63.158 17.78 10.48 39.22 4.61
160 161 1.227031 TCGTCGTGTGTGGTTCCAC 60.227 57.895 14.31 14.31 37.46 4.02
161 162 1.227031 GTCGTCGTGTGTGGTTCCA 60.227 57.895 0.00 0.00 0.00 3.53
162 163 1.227031 TGTCGTCGTGTGTGGTTCC 60.227 57.895 0.00 0.00 0.00 3.62
163 164 0.802994 TGTGTCGTCGTGTGTGGTTC 60.803 55.000 0.00 0.00 0.00 3.62
164 165 1.079875 GTGTGTCGTCGTGTGTGGTT 61.080 55.000 0.00 0.00 0.00 3.67
165 166 1.517694 GTGTGTCGTCGTGTGTGGT 60.518 57.895 0.00 0.00 0.00 4.16
166 167 2.573335 CGTGTGTCGTCGTGTGTGG 61.573 63.158 0.00 0.00 34.52 4.17
167 168 1.529065 CTCGTGTGTCGTCGTGTGTG 61.529 60.000 0.00 0.00 40.80 3.82
168 169 1.298116 CTCGTGTGTCGTCGTGTGT 60.298 57.895 0.00 0.00 40.80 3.72
169 170 2.636227 GCTCGTGTGTCGTCGTGTG 61.636 63.158 0.00 0.00 40.80 3.82
170 171 2.353145 GCTCGTGTGTCGTCGTGT 60.353 61.111 0.00 0.00 40.80 4.49
171 172 2.051256 AGCTCGTGTGTCGTCGTG 60.051 61.111 0.00 0.00 40.80 4.35
172 173 2.051256 CAGCTCGTGTGTCGTCGT 60.051 61.111 0.00 0.00 40.80 4.34
173 174 1.206745 AAACAGCTCGTGTGTCGTCG 61.207 55.000 0.00 0.00 40.26 5.12
174 175 0.229753 CAAACAGCTCGTGTGTCGTC 59.770 55.000 0.00 0.00 40.26 4.20
175 176 0.179121 TCAAACAGCTCGTGTGTCGT 60.179 50.000 6.42 0.00 40.26 4.34
176 177 0.229753 GTCAAACAGCTCGTGTGTCG 59.770 55.000 6.42 0.00 40.26 4.35
177 178 0.582005 GGTCAAACAGCTCGTGTGTC 59.418 55.000 6.42 2.29 40.26 3.67
178 179 0.814010 GGGTCAAACAGCTCGTGTGT 60.814 55.000 6.42 0.00 40.26 3.72
179 180 0.813610 TGGGTCAAACAGCTCGTGTG 60.814 55.000 0.00 0.00 40.26 3.82
180 181 0.532862 CTGGGTCAAACAGCTCGTGT 60.533 55.000 0.00 0.00 43.24 4.49
181 182 2.238353 CTGGGTCAAACAGCTCGTG 58.762 57.895 0.00 0.00 0.00 4.35
182 183 4.779475 CTGGGTCAAACAGCTCGT 57.221 55.556 0.00 0.00 0.00 4.18
187 188 0.532862 ACACGAGCTGGGTCAAACAG 60.533 55.000 0.00 0.00 38.95 3.16
188 189 0.531974 GACACGAGCTGGGTCAAACA 60.532 55.000 12.04 0.00 0.00 2.83
189 190 1.557443 CGACACGAGCTGGGTCAAAC 61.557 60.000 15.70 0.00 0.00 2.93
190 191 1.300620 CGACACGAGCTGGGTCAAA 60.301 57.895 15.70 0.00 0.00 2.69
191 192 2.338620 CGACACGAGCTGGGTCAA 59.661 61.111 15.70 0.00 0.00 3.18
192 193 2.910479 ACGACACGAGCTGGGTCA 60.910 61.111 15.70 0.00 0.00 4.02
193 194 2.430921 CACGACACGAGCTGGGTC 60.431 66.667 0.00 4.65 0.00 4.46
194 195 3.991051 CCACGACACGAGCTGGGT 61.991 66.667 0.00 0.00 0.00 4.51
211 212 1.524621 ATACTGCACATGGCTCCGC 60.525 57.895 0.00 0.00 45.15 5.54
212 213 1.779025 GCATACTGCACATGGCTCCG 61.779 60.000 0.00 0.00 44.26 4.63
213 214 2.028130 GCATACTGCACATGGCTCC 58.972 57.895 0.00 0.00 44.26 4.70
223 224 3.853671 GTGTTGCTAAATGTGCATACTGC 59.146 43.478 0.00 0.00 45.29 4.40
224 225 4.082841 TGGTGTTGCTAAATGTGCATACTG 60.083 41.667 0.00 0.00 40.34 2.74
225 226 4.078537 TGGTGTTGCTAAATGTGCATACT 58.921 39.130 0.00 0.00 40.34 2.12
226 227 4.433186 TGGTGTTGCTAAATGTGCATAC 57.567 40.909 0.00 0.00 40.34 2.39
227 228 5.459536 TTTGGTGTTGCTAAATGTGCATA 57.540 34.783 0.00 0.00 40.34 3.14
228 229 4.333913 TTTGGTGTTGCTAAATGTGCAT 57.666 36.364 0.00 0.00 40.34 3.96
229 230 3.808466 TTTGGTGTTGCTAAATGTGCA 57.192 38.095 0.00 0.00 38.80 4.57
230 231 5.007528 ACATTTTTGGTGTTGCTAAATGTGC 59.992 36.000 9.83 0.00 43.73 4.57
231 232 6.601741 ACATTTTTGGTGTTGCTAAATGTG 57.398 33.333 9.83 0.00 43.73 3.21
232 233 7.014092 CAACATTTTTGGTGTTGCTAAATGT 57.986 32.000 6.12 0.00 46.64 2.71
241 242 8.954350 TGATTTTGATTCAACATTTTTGGTGTT 58.046 25.926 0.00 0.00 40.23 3.32
242 243 8.503458 TGATTTTGATTCAACATTTTTGGTGT 57.497 26.923 0.00 0.00 0.00 4.16
243 244 9.784680 TTTGATTTTGATTCAACATTTTTGGTG 57.215 25.926 0.00 0.00 33.03 4.17
245 246 8.960075 GCTTTGATTTTGATTCAACATTTTTGG 58.040 29.630 0.00 0.00 33.03 3.28
246 247 9.724839 AGCTTTGATTTTGATTCAACATTTTTG 57.275 25.926 0.00 0.00 33.03 2.44
247 248 9.724839 CAGCTTTGATTTTGATTCAACATTTTT 57.275 25.926 0.00 0.00 33.03 1.94
248 249 9.111613 TCAGCTTTGATTTTGATTCAACATTTT 57.888 25.926 0.00 0.00 33.03 1.82
249 250 8.665643 TCAGCTTTGATTTTGATTCAACATTT 57.334 26.923 0.00 0.00 33.03 2.32
250 251 8.842358 ATCAGCTTTGATTTTGATTCAACATT 57.158 26.923 0.00 0.00 33.03 2.71
251 252 8.842358 AATCAGCTTTGATTTTGATTCAACAT 57.158 26.923 0.00 0.00 35.91 2.71
257 258 6.366877 CGGTTGAATCAGCTTTGATTTTGATT 59.633 34.615 2.99 0.00 41.53 2.57
258 259 5.865552 CGGTTGAATCAGCTTTGATTTTGAT 59.134 36.000 2.99 0.00 38.50 2.57
259 260 5.221880 CGGTTGAATCAGCTTTGATTTTGA 58.778 37.500 2.99 0.00 38.50 2.69
260 261 4.143263 GCGGTTGAATCAGCTTTGATTTTG 60.143 41.667 2.99 0.00 38.50 2.44
261 262 3.989817 GCGGTTGAATCAGCTTTGATTTT 59.010 39.130 2.99 0.00 38.50 1.82
262 263 3.005684 TGCGGTTGAATCAGCTTTGATTT 59.994 39.130 2.99 0.00 38.50 2.17
263 264 2.557924 TGCGGTTGAATCAGCTTTGATT 59.442 40.909 1.05 1.05 40.81 2.57
264 265 2.161855 TGCGGTTGAATCAGCTTTGAT 58.838 42.857 0.00 0.00 0.00 2.57
265 266 1.603456 TGCGGTTGAATCAGCTTTGA 58.397 45.000 0.00 0.00 0.00 2.69
266 267 2.420628 TTGCGGTTGAATCAGCTTTG 57.579 45.000 0.00 0.00 0.00 2.77
267 268 3.451141 TTTTGCGGTTGAATCAGCTTT 57.549 38.095 0.00 0.00 0.00 3.51
268 269 3.451141 TTTTTGCGGTTGAATCAGCTT 57.549 38.095 0.00 0.00 0.00 3.74
315 316 6.940867 ACTCCTTTTTCGGCTACTCTATTTTT 59.059 34.615 0.00 0.00 0.00 1.94
316 317 6.473758 ACTCCTTTTTCGGCTACTCTATTTT 58.526 36.000 0.00 0.00 0.00 1.82
317 318 6.051179 ACTCCTTTTTCGGCTACTCTATTT 57.949 37.500 0.00 0.00 0.00 1.40
318 319 5.187186 TGACTCCTTTTTCGGCTACTCTATT 59.813 40.000 0.00 0.00 0.00 1.73
319 320 4.710375 TGACTCCTTTTTCGGCTACTCTAT 59.290 41.667 0.00 0.00 0.00 1.98
320 321 4.084287 TGACTCCTTTTTCGGCTACTCTA 58.916 43.478 0.00 0.00 0.00 2.43
321 322 2.897969 TGACTCCTTTTTCGGCTACTCT 59.102 45.455 0.00 0.00 0.00 3.24
322 323 3.056749 TCTGACTCCTTTTTCGGCTACTC 60.057 47.826 0.00 0.00 0.00 2.59
323 324 2.897969 TCTGACTCCTTTTTCGGCTACT 59.102 45.455 0.00 0.00 0.00 2.57
324 325 2.994578 GTCTGACTCCTTTTTCGGCTAC 59.005 50.000 0.00 0.00 0.00 3.58
325 326 2.631062 TGTCTGACTCCTTTTTCGGCTA 59.369 45.455 9.51 0.00 0.00 3.93
326 327 1.416401 TGTCTGACTCCTTTTTCGGCT 59.584 47.619 9.51 0.00 0.00 5.52
327 328 1.878953 TGTCTGACTCCTTTTTCGGC 58.121 50.000 9.51 0.00 0.00 5.54
328 329 4.893424 TTTTGTCTGACTCCTTTTTCGG 57.107 40.909 9.51 0.00 0.00 4.30
347 348 4.287720 CTCTTAAAAACGGCGCTCTTTTT 58.712 39.130 22.83 22.83 34.65 1.94
348 349 3.304458 CCTCTTAAAAACGGCGCTCTTTT 60.304 43.478 6.90 13.01 0.00 2.27
349 350 2.225727 CCTCTTAAAAACGGCGCTCTTT 59.774 45.455 6.90 6.75 0.00 2.52
350 351 1.804748 CCTCTTAAAAACGGCGCTCTT 59.195 47.619 6.90 0.00 0.00 2.85
351 352 1.439679 CCTCTTAAAAACGGCGCTCT 58.560 50.000 6.90 0.00 0.00 4.09
352 353 0.179197 GCCTCTTAAAAACGGCGCTC 60.179 55.000 6.90 0.00 32.22 5.03
353 354 0.605589 AGCCTCTTAAAAACGGCGCT 60.606 50.000 6.90 0.00 46.85 5.92
354 355 1.062148 CTAGCCTCTTAAAAACGGCGC 59.938 52.381 6.90 0.00 46.85 6.53
355 356 2.347755 GTCTAGCCTCTTAAAAACGGCG 59.652 50.000 4.80 4.80 46.85 6.46
356 357 3.332034 TGTCTAGCCTCTTAAAAACGGC 58.668 45.455 0.00 0.00 42.79 5.68
357 358 4.626172 GTCTGTCTAGCCTCTTAAAAACGG 59.374 45.833 0.00 0.00 0.00 4.44
358 359 5.227908 TGTCTGTCTAGCCTCTTAAAAACG 58.772 41.667 0.00 0.00 0.00 3.60
359 360 6.456501 TCTGTCTGTCTAGCCTCTTAAAAAC 58.543 40.000 0.00 0.00 0.00 2.43
360 361 6.665992 TCTGTCTGTCTAGCCTCTTAAAAA 57.334 37.500 0.00 0.00 0.00 1.94
361 362 6.859112 ATCTGTCTGTCTAGCCTCTTAAAA 57.141 37.500 0.00 0.00 0.00 1.52
362 363 7.956328 TTATCTGTCTGTCTAGCCTCTTAAA 57.044 36.000 0.00 0.00 0.00 1.52
363 364 7.956328 TTTATCTGTCTGTCTAGCCTCTTAA 57.044 36.000 0.00 0.00 0.00 1.85
364 365 7.834681 TCTTTTATCTGTCTGTCTAGCCTCTTA 59.165 37.037 0.00 0.00 0.00 2.10
365 366 6.665680 TCTTTTATCTGTCTGTCTAGCCTCTT 59.334 38.462 0.00 0.00 0.00 2.85
366 367 6.191315 TCTTTTATCTGTCTGTCTAGCCTCT 58.809 40.000 0.00 0.00 0.00 3.69
367 368 6.320164 TCTCTTTTATCTGTCTGTCTAGCCTC 59.680 42.308 0.00 0.00 0.00 4.70
368 369 6.191315 TCTCTTTTATCTGTCTGTCTAGCCT 58.809 40.000 0.00 0.00 0.00 4.58
369 370 6.458232 TCTCTTTTATCTGTCTGTCTAGCC 57.542 41.667 0.00 0.00 0.00 3.93
370 371 9.062524 TCTATCTCTTTTATCTGTCTGTCTAGC 57.937 37.037 0.00 0.00 0.00 3.42
373 374 9.866655 ATCTCTATCTCTTTTATCTGTCTGTCT 57.133 33.333 0.00 0.00 0.00 3.41
385 386 8.902806 CGATGCCTATCTATCTCTATCTCTTTT 58.097 37.037 0.00 0.00 0.00 2.27
386 387 8.052748 ACGATGCCTATCTATCTCTATCTCTTT 58.947 37.037 0.00 0.00 0.00 2.52
387 388 7.573710 ACGATGCCTATCTATCTCTATCTCTT 58.426 38.462 0.00 0.00 0.00 2.85
388 389 7.136822 ACGATGCCTATCTATCTCTATCTCT 57.863 40.000 0.00 0.00 0.00 3.10
389 390 6.989759 TGACGATGCCTATCTATCTCTATCTC 59.010 42.308 0.00 0.00 0.00 2.75
390 391 6.894682 TGACGATGCCTATCTATCTCTATCT 58.105 40.000 0.00 0.00 0.00 1.98
391 392 7.443879 TGATGACGATGCCTATCTATCTCTATC 59.556 40.741 0.00 0.00 0.00 2.08
392 393 7.228507 GTGATGACGATGCCTATCTATCTCTAT 59.771 40.741 0.00 0.00 0.00 1.98
393 394 6.540551 GTGATGACGATGCCTATCTATCTCTA 59.459 42.308 0.00 0.00 0.00 2.43
394 395 5.356751 GTGATGACGATGCCTATCTATCTCT 59.643 44.000 0.00 0.00 0.00 3.10
395 396 5.577835 GTGATGACGATGCCTATCTATCTC 58.422 45.833 0.00 0.00 0.00 2.75
396 397 5.574891 GTGATGACGATGCCTATCTATCT 57.425 43.478 0.00 0.00 0.00 1.98
417 418 4.868116 AAACTGTGTGCGGGGCGT 62.868 61.111 0.00 0.00 0.00 5.68
418 419 4.025401 GAAACTGTGTGCGGGGCG 62.025 66.667 0.00 0.00 0.00 6.13
419 420 4.025401 CGAAACTGTGTGCGGGGC 62.025 66.667 0.00 0.00 0.00 5.80
420 421 4.025401 GCGAAACTGTGTGCGGGG 62.025 66.667 0.00 0.00 0.00 5.73
421 422 4.368808 CGCGAAACTGTGTGCGGG 62.369 66.667 0.00 6.74 46.31 6.13
424 425 0.939577 TCTCTCGCGAAACTGTGTGC 60.940 55.000 11.33 0.00 0.00 4.57
425 426 1.190323 GTTCTCTCGCGAAACTGTGTG 59.810 52.381 11.33 0.00 0.00 3.82
426 427 1.202371 TGTTCTCTCGCGAAACTGTGT 60.202 47.619 19.57 0.00 0.00 3.72
427 428 1.453524 CTGTTCTCTCGCGAAACTGTG 59.546 52.381 19.57 4.28 0.00 3.66
428 429 1.603172 CCTGTTCTCTCGCGAAACTGT 60.603 52.381 19.57 0.00 0.00 3.55
429 430 1.063806 CCTGTTCTCTCGCGAAACTG 58.936 55.000 19.57 18.34 0.00 3.16
430 431 0.667792 GCCTGTTCTCTCGCGAAACT 60.668 55.000 19.57 0.00 0.00 2.66
431 432 1.627550 GGCCTGTTCTCTCGCGAAAC 61.628 60.000 11.33 12.84 0.00 2.78
432 433 1.374252 GGCCTGTTCTCTCGCGAAA 60.374 57.895 11.33 0.00 0.00 3.46
433 434 2.261671 GGCCTGTTCTCTCGCGAA 59.738 61.111 11.33 0.02 0.00 4.70
434 435 2.989253 TGGCCTGTTCTCTCGCGA 60.989 61.111 9.26 9.26 0.00 5.87
435 436 2.811317 GTGGCCTGTTCTCTCGCG 60.811 66.667 3.32 0.00 0.00 5.87
436 437 1.739562 CAGTGGCCTGTTCTCTCGC 60.740 63.158 3.32 0.00 33.80 5.03
437 438 1.079543 CCAGTGGCCTGTTCTCTCG 60.080 63.158 3.32 0.00 36.95 4.04
438 439 0.036858 GACCAGTGGCCTGTTCTCTC 60.037 60.000 9.78 0.00 36.95 3.20
439 440 1.821061 CGACCAGTGGCCTGTTCTCT 61.821 60.000 9.78 0.00 36.95 3.10
440 441 1.374758 CGACCAGTGGCCTGTTCTC 60.375 63.158 9.78 0.00 36.95 2.87
441 442 1.821061 CTCGACCAGTGGCCTGTTCT 61.821 60.000 9.78 0.00 36.95 3.01
442 443 1.374758 CTCGACCAGTGGCCTGTTC 60.375 63.158 9.78 0.00 36.95 3.18
443 444 2.743718 CTCGACCAGTGGCCTGTT 59.256 61.111 9.78 0.00 36.95 3.16
444 445 4.008933 GCTCGACCAGTGGCCTGT 62.009 66.667 9.78 0.00 36.95 4.00
445 446 1.888436 TTAGCTCGACCAGTGGCCTG 61.888 60.000 9.78 0.00 38.50 4.85
446 447 1.608717 CTTAGCTCGACCAGTGGCCT 61.609 60.000 9.78 0.64 0.00 5.19
447 448 1.153549 CTTAGCTCGACCAGTGGCC 60.154 63.158 9.78 0.00 0.00 5.36
462 463 6.018262 CCGTTTCACTTCACTCATTTGTCTTA 60.018 38.462 0.00 0.00 0.00 2.10
640 644 1.746991 CCCTTTTGCTCTCGGAGGC 60.747 63.158 4.96 8.21 0.00 4.70
691 862 3.470709 CTCTCCTCTGTTGCAACTGAAA 58.529 45.455 30.92 22.85 36.61 2.69
765 1338 0.102300 GTTGGGTGTTGTGCTGTTCC 59.898 55.000 0.00 0.00 0.00 3.62
776 1349 1.895131 GAAGCCATTGATGTTGGGTGT 59.105 47.619 0.00 0.00 43.93 4.16
783 1359 2.537633 ATGGTGGAAGCCATTGATGT 57.462 45.000 0.00 0.00 46.33 3.06
794 1370 2.559668 ACGACTTACGAGAATGGTGGAA 59.440 45.455 0.00 0.00 45.77 3.53
803 1397 3.367327 CGAGAGAGAAACGACTTACGAGA 59.633 47.826 0.00 0.00 45.77 4.04
860 1454 4.546570 GAACCAAGCACACAATTAAGGTC 58.453 43.478 0.00 0.00 0.00 3.85
864 1458 3.957497 ACAGGAACCAAGCACACAATTAA 59.043 39.130 0.00 0.00 0.00 1.40
865 1459 3.561143 ACAGGAACCAAGCACACAATTA 58.439 40.909 0.00 0.00 0.00 1.40
866 1460 2.362077 GACAGGAACCAAGCACACAATT 59.638 45.455 0.00 0.00 0.00 2.32
867 1461 1.956477 GACAGGAACCAAGCACACAAT 59.044 47.619 0.00 0.00 0.00 2.71
868 1462 1.388547 GACAGGAACCAAGCACACAA 58.611 50.000 0.00 0.00 0.00 3.33
869 1463 0.465460 GGACAGGAACCAAGCACACA 60.465 55.000 0.00 0.00 0.00 3.72
871 1465 1.150536 GGGACAGGAACCAAGCACA 59.849 57.895 0.00 0.00 0.00 4.57
872 1466 0.606673 GAGGGACAGGAACCAAGCAC 60.607 60.000 0.00 0.00 0.00 4.40
874 1468 1.002011 GGAGGGACAGGAACCAAGC 60.002 63.158 0.00 0.00 0.00 4.01
875 1469 1.003696 GAAGGAGGGACAGGAACCAAG 59.996 57.143 0.00 0.00 0.00 3.61
876 1470 1.064825 GAAGGAGGGACAGGAACCAA 58.935 55.000 0.00 0.00 0.00 3.67
878 1472 1.900545 CGGAAGGAGGGACAGGAACC 61.901 65.000 0.00 0.00 0.00 3.62
893 1498 0.321671 CAGAGAAGAACCTGCCGGAA 59.678 55.000 5.05 0.00 0.00 4.30
1056 1663 1.962822 CAAGCGCTGCACCTTCTCA 60.963 57.895 12.58 0.00 0.00 3.27
1057 1664 2.684843 CCAAGCGCTGCACCTTCTC 61.685 63.158 12.58 0.00 0.00 2.87
1086 1693 1.509923 GGTAAGGTCCACGTCCTCG 59.490 63.158 0.00 0.00 43.34 4.63
1092 1699 2.718073 CCCGAGGGTAAGGTCCACG 61.718 68.421 0.00 0.00 0.00 4.94
1126 1733 1.226888 CGAAGTCGAACCGATCCCC 60.227 63.158 0.00 0.00 43.02 4.81
1191 1798 2.503061 CCACCTCCTGGATCAGCG 59.497 66.667 0.00 0.00 43.95 5.18
1335 2059 4.910195 ACAGAAGTAGACATCCATGCAAA 58.090 39.130 0.00 0.00 0.00 3.68
1336 2060 4.558226 ACAGAAGTAGACATCCATGCAA 57.442 40.909 0.00 0.00 0.00 4.08
1337 2061 5.876651 ATACAGAAGTAGACATCCATGCA 57.123 39.130 0.00 0.00 32.86 3.96
1346 2070 8.089115 AGCAAAAGACAAATACAGAAGTAGAC 57.911 34.615 0.00 0.00 32.86 2.59
1388 2112 9.956640 ATGTGCATTTATATTTTCCCTCAAAAA 57.043 25.926 0.00 0.00 37.52 1.94
1390 2114 7.986320 CCATGTGCATTTATATTTTCCCTCAAA 59.014 33.333 0.00 0.00 0.00 2.69
1391 2115 7.125507 ACCATGTGCATTTATATTTTCCCTCAA 59.874 33.333 0.00 0.00 0.00 3.02
1392 2116 6.610830 ACCATGTGCATTTATATTTTCCCTCA 59.389 34.615 0.00 0.00 0.00 3.86
1393 2117 7.054491 ACCATGTGCATTTATATTTTCCCTC 57.946 36.000 0.00 0.00 0.00 4.30
1394 2118 8.725606 ATACCATGTGCATTTATATTTTCCCT 57.274 30.769 0.00 0.00 0.00 4.20
1410 2134 8.865420 ATACTACTCCAGTACTATACCATGTG 57.135 38.462 0.00 0.00 42.56 3.21
1486 2210 5.772672 TGACCTAACTGGCACAAATTTATGT 59.227 36.000 0.00 0.00 38.70 2.29
1487 2211 6.266168 TGACCTAACTGGCACAAATTTATG 57.734 37.500 0.00 0.00 38.70 1.90
1488 2212 5.418840 CCTGACCTAACTGGCACAAATTTAT 59.581 40.000 0.00 0.00 38.70 1.40
1489 2213 4.764823 CCTGACCTAACTGGCACAAATTTA 59.235 41.667 0.00 0.00 38.70 1.40
1490 2214 3.573967 CCTGACCTAACTGGCACAAATTT 59.426 43.478 0.00 0.00 38.70 1.82
1524 2248 6.820656 ACAAACAATTAAACAATGCTTGTCCA 59.179 30.769 2.65 0.00 44.59 4.02
1530 2254 9.248291 CAGTCTTACAAACAATTAAACAATGCT 57.752 29.630 0.00 0.00 0.00 3.79
1532 2256 9.528018 ACCAGTCTTACAAACAATTAAACAATG 57.472 29.630 0.00 0.00 0.00 2.82
1535 2259 9.360093 CAAACCAGTCTTACAAACAATTAAACA 57.640 29.630 0.00 0.00 0.00 2.83
1536 2260 8.325282 GCAAACCAGTCTTACAAACAATTAAAC 58.675 33.333 0.00 0.00 0.00 2.01
1540 2264 5.040635 CGCAAACCAGTCTTACAAACAATT 58.959 37.500 0.00 0.00 0.00 2.32
1562 2353 3.719924 TGTATTTAACCCCTCGCATACG 58.280 45.455 0.00 0.00 42.01 3.06
1573 2365 4.833390 AGGCACTCTCACTGTATTTAACC 58.167 43.478 0.00 0.00 0.00 2.85
1603 2395 4.481930 TTACCAAAGTGATTGCGACAAG 57.518 40.909 0.00 0.00 37.73 3.16
1647 2439 2.160813 ACGTTTGGACAAGTCACAACAC 59.839 45.455 2.29 5.24 0.00 3.32
1650 2442 5.624344 TTTTACGTTTGGACAAGTCACAA 57.376 34.783 0.00 1.91 0.00 3.33
1678 2470 2.159099 TGAGATATGAACGGAGGCACAC 60.159 50.000 0.00 0.00 0.00 3.82
1679 2471 2.101415 CTGAGATATGAACGGAGGCACA 59.899 50.000 0.00 0.00 0.00 4.57
1705 2497 1.922369 ATGCCACAGGGACAGAGCT 60.922 57.895 0.00 0.00 35.59 4.09
1715 2507 4.111016 CACGCTGGCATGCCACAG 62.111 66.667 35.59 30.22 41.89 3.66
1738 2578 3.876198 GCCGCTAACATGTGGGCG 61.876 66.667 27.64 27.64 45.97 6.13
1795 2729 9.681062 TTAAAATCCAGGAGGTTCTATGTAAAG 57.319 33.333 0.00 0.00 35.89 1.85
1799 2733 9.853177 CTTATTAAAATCCAGGAGGTTCTATGT 57.147 33.333 0.00 0.00 35.89 2.29
1804 2738 8.575649 TTGTCTTATTAAAATCCAGGAGGTTC 57.424 34.615 0.00 0.00 35.89 3.62
1897 3250 7.989741 ACATTTTCCCAAAACATGTTGAACATA 59.010 29.630 12.82 0.67 33.12 2.29
1914 3267 9.843334 TTTATAATACACGTGAAACATTTTCCC 57.157 29.630 25.01 0.00 35.74 3.97
1949 3302 7.412781 GCATGACAAACATCTTTCAAAAACACA 60.413 33.333 0.00 0.00 37.07 3.72
1988 3341 8.996988 ACACACTATTTTTAATACACGTTGTG 57.003 30.769 5.87 5.87 39.75 3.33
2286 3687 1.754803 CTCAACTAGTCCCGTATGCCA 59.245 52.381 0.00 0.00 0.00 4.92
2313 3714 7.581476 ACACACAAGTTAAATACATACACTGC 58.419 34.615 0.00 0.00 0.00 4.40
2651 4052 1.062488 GCCTCCATGACCCCCATAGT 61.062 60.000 0.00 0.00 33.31 2.12
2652 4053 1.061905 TGCCTCCATGACCCCCATAG 61.062 60.000 0.00 0.00 33.31 2.23
2653 4054 1.005423 TGCCTCCATGACCCCCATA 59.995 57.895 0.00 0.00 33.31 2.74
2654 4055 2.287117 TGCCTCCATGACCCCCAT 60.287 61.111 0.00 0.00 35.44 4.00
2667 4068 2.560105 GCTCTGGAAAATGTTTCTGCCT 59.440 45.455 1.11 0.00 0.00 4.75
2759 4413 1.906333 GACCAACACGGGGGCATTT 60.906 57.895 0.00 0.00 40.22 2.32
2760 4414 2.282887 GACCAACACGGGGGCATT 60.283 61.111 0.00 0.00 40.22 3.56
2761 4415 3.567579 CTGACCAACACGGGGGCAT 62.568 63.158 0.00 0.00 44.08 4.40
2769 4438 2.480416 CGGATCTAGAGCTGACCAACAC 60.480 54.545 11.54 0.00 0.00 3.32
2780 4449 1.107114 ACACAGTGGCGGATCTAGAG 58.893 55.000 5.31 0.00 0.00 2.43
2872 4541 1.340697 ACTTCTTTATTCACCGGCCCC 60.341 52.381 0.00 0.00 0.00 5.80
2995 6452 0.388134 GCGAACCGAGCTGAACACTA 60.388 55.000 0.00 0.00 0.00 2.74
3096 6575 7.943079 TCCTGAAATGATACACAAATCATGT 57.057 32.000 0.37 0.00 44.08 3.21
3144 6624 0.752009 CGGCTAGCTCTCACACCCTA 60.752 60.000 15.72 0.00 0.00 3.53
3181 6662 1.275666 TGCTTGTGAGGCTAAGGCTA 58.724 50.000 0.00 0.00 38.98 3.93
3257 6740 2.290960 GGATGGTCCTATATGGGTTGGC 60.291 54.545 4.86 0.00 36.20 4.52
3288 6771 7.311092 TGAAGGACCTGAGTGTAATTTTCTA 57.689 36.000 0.00 0.00 0.00 2.10
3301 6784 4.592942 CATCAATTTCCTGAAGGACCTGA 58.407 43.478 0.00 2.95 45.39 3.86
3331 6814 9.642343 AAGGTTTAGAAGGAGTATTGAGTTTTT 57.358 29.630 0.00 0.00 0.00 1.94
3372 6855 6.460123 CCACTACATCAATAATTTCCACAGGC 60.460 42.308 0.00 0.00 0.00 4.85
3406 6891 2.156098 TCTTATGGCACCGACCAAAAC 58.844 47.619 0.00 0.00 44.65 2.43
3408 6893 2.290641 ACATCTTATGGCACCGACCAAA 60.291 45.455 0.00 0.00 44.65 3.28
3422 6907 7.939039 AGACAATCTGTTTTCCTTGACATCTTA 59.061 33.333 0.00 0.00 0.00 2.10
3454 6939 4.500545 CCGATCCATCTTCGTCATCTTCTT 60.501 45.833 0.00 0.00 34.85 2.52
3481 6977 1.286553 CTAGTGAGGTGAGGTCTCCCT 59.713 57.143 7.44 7.44 46.66 4.20
3534 7030 1.204941 TCTAGCTCCTTCTTCAACCGC 59.795 52.381 0.00 0.00 0.00 5.68
3601 7097 2.325661 TCATGTCTTGGTCCTCTGGA 57.674 50.000 0.00 0.00 0.00 3.86
3636 7132 0.170339 TCGAATGCGTCATCGAGTGT 59.830 50.000 0.00 0.00 39.71 3.55
3650 7146 2.154462 CTTTGCAGGTGGTCTTCGAAT 58.846 47.619 0.00 0.00 0.00 3.34
3670 7166 0.100682 TCATTGCTCTCTCGGCGTAC 59.899 55.000 6.85 0.00 0.00 3.67
3671 7167 0.100682 GTCATTGCTCTCTCGGCGTA 59.899 55.000 6.85 0.00 0.00 4.42
3696 7216 2.176045 TGGAGACTATCTCAACGCCAA 58.824 47.619 8.06 0.00 45.12 4.52
3697 7217 1.847328 TGGAGACTATCTCAACGCCA 58.153 50.000 8.06 0.00 45.12 5.69
3805 7328 9.826574 ACATACATGTTACCGAGTTGTATTTAT 57.173 29.630 2.30 0.00 37.90 1.40
3822 7447 8.969260 ATCATTCTTACATCACACATACATGT 57.031 30.769 2.69 2.69 42.84 3.21
3904 7529 7.355101 TCTATAGTCTCACAGTGGTATCCTTT 58.645 38.462 0.00 0.00 0.00 3.11
3919 7545 8.254508 AGTGTCCAACTTCATTTCTATAGTCTC 58.745 37.037 0.00 0.00 34.57 3.36
3920 7546 8.140112 AGTGTCCAACTTCATTTCTATAGTCT 57.860 34.615 0.00 0.00 34.57 3.24
3945 7571 9.330063 GTTCATCAATGACATAGACCTCAATAA 57.670 33.333 0.00 0.00 36.36 1.40
4006 7635 3.882131 ATGTGGAGCATGGGTACAC 57.118 52.632 3.90 3.90 44.24 2.90
4019 7648 1.812571 GGTTAGGAAGCACACATGTGG 59.187 52.381 28.64 18.29 45.72 4.17
4033 7662 7.820872 TCCGAGAAAATGTTAAACTAGGTTAGG 59.179 37.037 0.00 0.00 0.00 2.69
4053 7682 5.111989 CAAAATCTGATAGCAAGTCCGAGA 58.888 41.667 0.00 0.00 0.00 4.04
4156 7787 3.570125 TGTCCAATTTTGATTGCCGTGTA 59.430 39.130 0.00 0.00 0.00 2.90
4162 7793 5.806502 TCGATTGATGTCCAATTTTGATTGC 59.193 36.000 0.00 0.00 45.00 3.56
4262 7902 6.610456 TGTTTATGTAAGTGTCATGTGCATG 58.390 36.000 5.86 5.86 40.09 4.06
4301 7941 2.561478 AAAGCACCGGAGTTATGTGT 57.439 45.000 9.46 0.00 32.62 3.72
4406 8046 0.677731 TACCGACGGACCTCGACAAT 60.678 55.000 23.38 0.00 42.43 2.71
4410 8050 0.392863 TCATTACCGACGGACCTCGA 60.393 55.000 23.38 7.27 42.43 4.04
4455 8095 4.250116 AGAATAGCGAGCATTAGGACTG 57.750 45.455 0.00 0.00 0.00 3.51
4510 8150 7.233389 ACAGATGAGTAAAGTGTCACACTAT 57.767 36.000 11.89 0.00 44.62 2.12
4547 8187 7.558161 TGAGATACAATGAAATGATGACCAC 57.442 36.000 0.00 0.00 0.00 4.16
4603 8243 2.095969 TGCCAAGTAAGTCGCAAAATCG 60.096 45.455 0.00 0.00 0.00 3.34
4654 8296 4.061596 TGCCCGGATTTGTTTTGAATTTC 58.938 39.130 0.73 0.00 0.00 2.17
4666 8308 3.486383 ACGAATATGATTGCCCGGATTT 58.514 40.909 0.73 0.00 0.00 2.17
4704 8346 0.952280 TGGTGATAGACCTCGATCGC 59.048 55.000 11.09 0.00 46.32 4.58
4742 8384 2.623418 TCCACACTAGGATGGTCAGT 57.377 50.000 12.80 0.00 37.27 3.41
4799 8442 5.423015 ACACTAGTTATCAAGCACATCAGG 58.577 41.667 0.00 0.00 0.00 3.86
4887 8530 5.220931 GGAGAAATGCATGACCAAGTATCAC 60.221 44.000 0.00 0.00 0.00 3.06
4931 8574 3.555956 GTCTAACCACTGAATATGGCACG 59.444 47.826 0.00 0.00 41.31 5.34
4943 8586 4.394920 CGTTATTTGCCATGTCTAACCACT 59.605 41.667 0.00 0.00 0.00 4.00
4985 8628 9.462606 CTTTTGTATTCCTTATAAGAACACCCT 57.537 33.333 14.28 0.00 0.00 4.34
4986 8629 9.239551 ACTTTTGTATTCCTTATAAGAACACCC 57.760 33.333 14.28 0.00 0.00 4.61
5037 8682 7.505585 TGGATAATGACTTTTGACTTGTTCCTT 59.494 33.333 0.00 0.00 0.00 3.36
5069 8714 1.834188 GAAACGACAACCATCCCCAT 58.166 50.000 0.00 0.00 0.00 4.00
5072 8717 1.918868 GCCGAAACGACAACCATCCC 61.919 60.000 0.00 0.00 0.00 3.85
5131 8776 8.784994 TGATACTTCGCCAAATAAGTAAAAACA 58.215 29.630 0.00 0.00 40.53 2.83
5159 9111 8.737175 CAAGATACATAGATATGGCAAGCATTT 58.263 33.333 4.93 0.00 38.00 2.32
5230 9186 5.981174 TGGAAAATAAGGTACTAGAACCGG 58.019 41.667 0.00 0.00 44.77 5.28
5241 9197 6.435904 TCCGACAATTTCATGGAAAATAAGGT 59.564 34.615 0.00 0.00 35.11 3.50
5290 9246 1.065418 ACCAAATAGGACCGCCTGAAG 60.065 52.381 0.00 0.00 46.45 3.02
5313 9269 6.608405 TGATAGACCTTTATGGGTTACTTCGA 59.392 38.462 0.00 0.00 40.06 3.71
5350 9306 0.830648 ATGGACGATGGTGTTCCGAT 59.169 50.000 0.00 0.00 36.30 4.18
5419 9375 9.128107 CAATTGAATGTCATACAAGGTAAACAC 57.872 33.333 0.00 0.00 0.00 3.32
5490 9446 0.885879 ACCGACTATCACGTGCTTCA 59.114 50.000 11.67 0.00 0.00 3.02
5563 9520 2.036992 TGCCATTTTCCATGTCCAACAC 59.963 45.455 0.00 0.00 0.00 3.32
5589 9546 4.021544 GGCAACCCAAATCTTTGTCATACA 60.022 41.667 2.29 0.00 36.45 2.29
5665 9622 4.398988 GTCATACATGAGTGCCATTTTCCA 59.601 41.667 0.00 0.00 37.51 3.53
5666 9623 4.398988 TGTCATACATGAGTGCCATTTTCC 59.601 41.667 0.00 0.00 37.51 3.13
5667 9624 5.565592 TGTCATACATGAGTGCCATTTTC 57.434 39.130 0.00 0.00 37.51 2.29
5668 9625 5.981088 TTGTCATACATGAGTGCCATTTT 57.019 34.783 0.00 0.00 37.51 1.82
5669 9626 5.711506 TCTTTGTCATACATGAGTGCCATTT 59.288 36.000 0.00 0.00 37.51 2.32
5670 9627 5.255687 TCTTTGTCATACATGAGTGCCATT 58.744 37.500 0.00 0.00 37.51 3.16
5671 9628 4.847198 TCTTTGTCATACATGAGTGCCAT 58.153 39.130 0.00 0.00 37.51 4.40
5672 9629 4.284829 TCTTTGTCATACATGAGTGCCA 57.715 40.909 0.00 0.00 37.51 4.92
5673 9630 5.824904 AATCTTTGTCATACATGAGTGCC 57.175 39.130 0.00 0.00 37.51 5.01
5674 9631 6.032094 CCAAATCTTTGTCATACATGAGTGC 58.968 40.000 0.00 0.00 37.51 4.40
5675 9632 6.151648 ACCCAAATCTTTGTCATACATGAGTG 59.848 38.462 0.00 0.00 37.51 3.51
5676 9633 6.248433 ACCCAAATCTTTGTCATACATGAGT 58.752 36.000 0.00 0.00 37.51 3.41
5677 9634 6.764308 ACCCAAATCTTTGTCATACATGAG 57.236 37.500 0.00 0.00 37.51 2.90
5678 9635 6.572119 GCAACCCAAATCTTTGTCATACATGA 60.572 38.462 0.00 0.00 36.45 3.07
5679 9636 5.577945 GCAACCCAAATCTTTGTCATACATG 59.422 40.000 0.00 0.00 36.45 3.21
5680 9637 5.337491 GGCAACCCAAATCTTTGTCATACAT 60.337 40.000 2.29 0.00 36.45 2.29
5681 9638 4.021544 GGCAACCCAAATCTTTGTCATACA 60.022 41.667 2.29 0.00 36.45 2.29
5682 9639 4.494484 GGCAACCCAAATCTTTGTCATAC 58.506 43.478 2.29 0.00 36.45 2.39
5683 9640 3.192422 CGGCAACCCAAATCTTTGTCATA 59.808 43.478 2.29 0.00 36.45 2.15
5684 9641 2.029110 CGGCAACCCAAATCTTTGTCAT 60.029 45.455 2.29 0.00 36.45 3.06
5685 9642 1.339610 CGGCAACCCAAATCTTTGTCA 59.660 47.619 2.29 0.00 36.45 3.58
5686 9643 1.934849 GCGGCAACCCAAATCTTTGTC 60.935 52.381 0.00 0.00 36.45 3.18
5687 9644 0.033366 GCGGCAACCCAAATCTTTGT 59.967 50.000 0.00 0.00 36.45 2.83
5688 9645 0.033228 TGCGGCAACCCAAATCTTTG 59.967 50.000 0.00 0.00 37.90 2.77
5689 9646 0.975887 ATGCGGCAACCCAAATCTTT 59.024 45.000 6.82 0.00 0.00 2.52
5690 9647 0.975887 AATGCGGCAACCCAAATCTT 59.024 45.000 6.82 0.00 0.00 2.40
5691 9648 0.975887 AAATGCGGCAACCCAAATCT 59.024 45.000 6.82 0.00 0.00 2.40
5692 9649 1.077915 CAAATGCGGCAACCCAAATC 58.922 50.000 6.82 0.00 0.00 2.17
5693 9650 0.321475 CCAAATGCGGCAACCCAAAT 60.321 50.000 6.82 0.00 0.00 2.32
5694 9651 1.070445 CCAAATGCGGCAACCCAAA 59.930 52.632 6.82 0.00 0.00 3.28
5695 9652 2.739784 CCAAATGCGGCAACCCAA 59.260 55.556 6.82 0.00 0.00 4.12
5702 9659 1.596477 TTTGGTTGCCAAATGCGGC 60.596 52.632 9.05 0.00 46.92 6.53
5703 9660 4.766970 TTTGGTTGCCAAATGCGG 57.233 50.000 9.05 0.00 46.92 5.69
5716 9673 4.850932 CCTCGACAGGTTTCCAACTTTGG 61.851 52.174 1.13 1.13 41.38 3.28
5717 9674 2.290641 CCTCGACAGGTTTCCAACTTTG 59.709 50.000 0.00 0.00 34.60 2.77
5718 9675 2.572290 CCTCGACAGGTTTCCAACTTT 58.428 47.619 0.00 0.00 34.60 2.66
5719 9676 2.256117 CCTCGACAGGTTTCCAACTT 57.744 50.000 0.00 0.00 34.60 2.66
5729 9686 2.099921 CTCCACAATAGACCTCGACAGG 59.900 54.545 0.00 0.00 46.87 4.00
5730 9687 2.099921 CCTCCACAATAGACCTCGACAG 59.900 54.545 0.00 0.00 0.00 3.51
5731 9688 2.100197 CCTCCACAATAGACCTCGACA 58.900 52.381 0.00 0.00 0.00 4.35
5732 9689 2.100989 ACCTCCACAATAGACCTCGAC 58.899 52.381 0.00 0.00 0.00 4.20
5733 9690 2.526888 ACCTCCACAATAGACCTCGA 57.473 50.000 0.00 0.00 0.00 4.04
5734 9691 3.021695 TGTACCTCCACAATAGACCTCG 58.978 50.000 0.00 0.00 0.00 4.63
5735 9692 4.466726 ACTTGTACCTCCACAATAGACCTC 59.533 45.833 0.00 0.00 37.75 3.85
5736 9693 4.426704 ACTTGTACCTCCACAATAGACCT 58.573 43.478 0.00 0.00 37.75 3.85
5737 9694 4.820894 ACTTGTACCTCCACAATAGACC 57.179 45.455 0.00 0.00 37.75 3.85
5738 9695 5.790593 TCAACTTGTACCTCCACAATAGAC 58.209 41.667 0.00 0.00 37.75 2.59
5739 9696 6.183361 TGTTCAACTTGTACCTCCACAATAGA 60.183 38.462 0.00 0.00 37.75 1.98
5740 9697 5.995282 TGTTCAACTTGTACCTCCACAATAG 59.005 40.000 0.00 0.00 37.75 1.73
5741 9698 5.931294 TGTTCAACTTGTACCTCCACAATA 58.069 37.500 0.00 0.00 37.75 1.90
5742 9699 4.787551 TGTTCAACTTGTACCTCCACAAT 58.212 39.130 0.00 0.00 37.75 2.71
5743 9700 4.223556 TGTTCAACTTGTACCTCCACAA 57.776 40.909 0.00 0.00 36.94 3.33
5744 9701 3.916359 TGTTCAACTTGTACCTCCACA 57.084 42.857 0.00 0.00 0.00 4.17
5745 9702 4.578928 ACAATGTTCAACTTGTACCTCCAC 59.421 41.667 4.20 0.00 33.96 4.02
5746 9703 4.787551 ACAATGTTCAACTTGTACCTCCA 58.212 39.130 4.20 0.00 33.96 3.86
5747 9704 4.819630 TGACAATGTTCAACTTGTACCTCC 59.180 41.667 5.63 0.00 35.80 4.30
5748 9705 6.371809 TTGACAATGTTCAACTTGTACCTC 57.628 37.500 5.63 0.00 35.80 3.85
5759 9716 4.458989 GGCTAGGATTGTTGACAATGTTCA 59.541 41.667 13.64 0.00 45.72 3.18
5827 9784 9.927668 ACTAGCAAAACGTTATACTAGGTAAAA 57.072 29.630 23.93 0.92 33.10 1.52
5887 9844 4.472691 TCATGTGCTTCACGAGAAAAAG 57.527 40.909 0.00 0.00 37.14 2.27
5896 9853 3.947196 TGAATGGGTATCATGTGCTTCAC 59.053 43.478 0.00 0.00 35.99 3.18
5959 9916 9.807649 TCATCATGTCTAAATATATCATGTCGG 57.192 33.333 9.81 3.87 37.64 4.79
5986 9943 5.807011 GCTTCATGTTGGATTTGGATGTTAC 59.193 40.000 0.00 0.00 0.00 2.50
6057 12010 4.910195 ACAATCATGTTGTCTAAGGCAGA 58.090 39.130 7.56 0.00 35.91 4.26
6139 12092 5.615925 AGTGACATACCTCTATGGGTTTC 57.384 43.478 0.00 0.00 40.48 2.78
6213 12175 5.592688 TCATCGTCATCACTAAGATACACCA 59.407 40.000 0.00 0.00 34.43 4.17
6231 12193 5.717078 TGAGTAGGTAAACAACTCATCGT 57.283 39.130 11.40 0.00 43.45 3.73
6324 12286 5.413309 TCCCAACAATGTCAAACTTGTTT 57.587 34.783 1.15 0.00 42.16 2.83
6346 12308 1.185618 TGACCACCAGAGCTAGCGTT 61.186 55.000 9.55 0.00 0.00 4.84
6393 12356 2.260481 GTTGGACTAGTAAGCGAGCAC 58.740 52.381 0.00 0.00 0.00 4.40
6441 12404 4.398988 CCAACAAATGCTAGATAAGGCACA 59.601 41.667 0.00 0.00 41.39 4.57
6491 12458 2.866762 GAGTATGACATTCTGAACCCGC 59.133 50.000 0.00 0.00 0.00 6.13
6547 12514 3.241995 GCGTCATTTAGCTTGTTACTCGG 60.242 47.826 0.00 0.00 0.00 4.63
6552 12519 2.159761 GCGTGCGTCATTTAGCTTGTTA 60.160 45.455 0.00 0.00 0.00 2.41
6576 12543 0.816018 TGTTGAACGTCGTGGCCATT 60.816 50.000 9.72 0.00 0.00 3.16
6589 12556 8.676401 CACATATGTGGACAATCTAATGTTGAA 58.324 33.333 25.41 0.00 42.10 2.69
6599 12566 4.395854 TGTTGAGCACATATGTGGACAATC 59.604 41.667 31.63 16.91 45.72 2.67
6605 12572 3.065786 GTCCATGTTGAGCACATATGTGG 59.934 47.826 31.63 15.53 45.06 4.17
6729 12697 2.494870 ACATCCTTGCCAAGCTTTGATC 59.505 45.455 0.86 0.00 0.00 2.92
6731 12699 1.888512 GACATCCTTGCCAAGCTTTGA 59.111 47.619 0.86 0.00 0.00 2.69
6737 12705 2.449464 TGATTGGACATCCTTGCCAAG 58.551 47.619 0.00 0.00 40.17 3.61
6753 12721 4.320608 ACAAACATCTTTGGCGTTGATT 57.679 36.364 0.00 0.00 41.12 2.57
6763 12731 5.789643 ACTACCATGCAACAAACATCTTT 57.210 34.783 0.00 0.00 0.00 2.52
6764 12732 5.183140 GGTACTACCATGCAACAAACATCTT 59.817 40.000 0.00 0.00 38.42 2.40
6777 12745 4.094294 CCAAACAATCACGGTACTACCATG 59.906 45.833 6.06 0.28 38.47 3.66
6820 12788 8.574251 AGGTATCACAACATAAAATGTGCTTA 57.426 30.769 1.18 0.00 45.08 3.09
6827 12795 8.623903 CAGCACATAGGTATCACAACATAAAAT 58.376 33.333 0.00 0.00 0.00 1.82
6912 12880 3.843619 TCAATGTCCACACTCCTAATCCA 59.156 43.478 0.00 0.00 0.00 3.41
6913 12881 4.487714 TCAATGTCCACACTCCTAATCC 57.512 45.455 0.00 0.00 0.00 3.01
6983 12970 1.526575 AATGGCTTCCTTGGTGCACG 61.527 55.000 11.45 0.00 0.00 5.34
7018 13005 1.202891 GGTGGTGGTAAAGGAGTTGCT 60.203 52.381 0.00 0.00 0.00 3.91
7049 13039 3.017442 TGTGATTTGGTCGTTGGTCAAA 58.983 40.909 0.00 0.00 35.30 2.69
7111 13101 2.599281 TGGTCGCGGAGAAGGTGA 60.599 61.111 6.13 0.00 0.00 4.02
7308 13298 7.774134 TGGTACATAGTTCTAACGATAAAGCA 58.226 34.615 0.00 0.00 0.00 3.91
7506 16385 9.593134 GGCATATATAGAACAGTCCAAATCTAG 57.407 37.037 0.00 0.00 0.00 2.43
7540 16420 0.462047 AATAAGAGCCAACCGCCTCG 60.462 55.000 0.00 0.00 38.78 4.63
7664 16548 2.167281 CACACCATCTGTACCCTGAGAG 59.833 54.545 0.00 0.00 0.00 3.20
7713 16597 3.350833 GAGAAGAAGTGGTTGCCATGAT 58.649 45.455 0.00 0.00 35.28 2.45
7736 16620 0.249911 CCTCTATTACCGCTGGTGCC 60.250 60.000 10.01 0.00 36.19 5.01
7753 16640 2.437897 CAGAACCAAGGGCTGCCT 59.562 61.111 19.68 1.35 0.00 4.75
7986 16879 1.162800 GGCATGACGAAGATGCTCCC 61.163 60.000 14.52 0.01 44.75 4.30
8044 16974 0.036164 ATTAACGCTGAGGCCACACA 59.964 50.000 5.01 0.71 34.44 3.72
8063 16993 6.533730 TGAGATTTCTTGTTCCAAGCTAAGA 58.466 36.000 0.00 0.00 0.00 2.10
8130 17069 7.556275 CACCATGTCTACAGTTTTGGGTAATAT 59.444 37.037 5.67 0.00 0.00 1.28
8140 17079 3.248024 TCTCCCACCATGTCTACAGTTT 58.752 45.455 0.00 0.00 0.00 2.66
8259 17249 5.468072 GCATACTTACATGATAAGCTGCTGT 59.532 40.000 20.69 0.00 35.46 4.40
8281 17272 1.475682 TGTTTGTGTGTCATGCAAGCA 59.524 42.857 0.00 0.00 32.49 3.91
8302 17293 1.404035 GCCGCTCGGTATCCAATTTTT 59.596 47.619 10.24 0.00 37.65 1.94
8322 17313 1.295220 GCGACGAGAAACGCGAATG 60.295 57.895 15.93 0.00 46.94 2.67
8413 17406 9.914131 GGATATTTACATATGCGAGATGCTATA 57.086 33.333 1.58 0.00 46.63 1.31
8478 17471 3.514309 GGACTAAAACCAGCTACCTCTCA 59.486 47.826 0.00 0.00 0.00 3.27
8495 17488 4.650972 AAAGGTGCAGTTAATGGGACTA 57.349 40.909 0.00 0.00 0.00 2.59
8547 17540 5.043737 ACTTTGCCAGAAAAGTGGTACTA 57.956 39.130 2.85 0.00 46.16 1.82
8630 17663 6.924060 AGAAATACCGAATAGATTTCAGACGG 59.076 38.462 0.00 0.00 43.61 4.79
8691 17729 1.768077 CCCTCCCCTAGCCTCTTGG 60.768 68.421 0.00 0.00 0.00 3.61
8692 17730 1.003573 ACCCTCCCCTAGCCTCTTG 59.996 63.158 0.00 0.00 0.00 3.02
8693 17731 1.003573 CACCCTCCCCTAGCCTCTT 59.996 63.158 0.00 0.00 0.00 2.85
8694 17732 2.699496 CACCCTCCCCTAGCCTCT 59.301 66.667 0.00 0.00 0.00 3.69
8728 18061 3.064324 GGCTGTTTGCGCTCCCAT 61.064 61.111 9.73 0.00 44.05 4.00
8768 18101 1.224069 CCTACGTACCGCGCTAGCTA 61.224 60.000 13.93 0.00 46.11 3.32
8769 18102 2.541120 CCTACGTACCGCGCTAGCT 61.541 63.158 13.93 0.00 46.11 3.32
8771 18104 2.635899 CCCTACGTACCGCGCTAG 59.364 66.667 5.56 0.00 46.11 3.42
8772 18105 2.901840 CCCCTACGTACCGCGCTA 60.902 66.667 5.56 0.00 46.11 4.26
8776 18109 2.124151 TCTCCCCCTACGTACCGC 60.124 66.667 0.00 0.00 0.00 5.68
8777 18110 1.527844 CCTCTCCCCCTACGTACCG 60.528 68.421 0.00 0.00 0.00 4.02
8779 18112 1.962100 CATTCCTCTCCCCCTACGTAC 59.038 57.143 0.00 0.00 0.00 3.67
8780 18113 1.572415 ACATTCCTCTCCCCCTACGTA 59.428 52.381 0.00 0.00 0.00 3.57
8781 18114 0.338814 ACATTCCTCTCCCCCTACGT 59.661 55.000 0.00 0.00 0.00 3.57
8782 18115 1.139058 CAACATTCCTCTCCCCCTACG 59.861 57.143 0.00 0.00 0.00 3.51
8783 18116 2.478292 TCAACATTCCTCTCCCCCTAC 58.522 52.381 0.00 0.00 0.00 3.18
8784 18117 2.961536 TCAACATTCCTCTCCCCCTA 57.038 50.000 0.00 0.00 0.00 3.53
8785 18118 2.243221 CAATCAACATTCCTCTCCCCCT 59.757 50.000 0.00 0.00 0.00 4.79
8803 18138 2.715336 CCATCCATCTTCCTCCTCCAAT 59.285 50.000 0.00 0.00 0.00 3.16
8845 18180 2.025981 CCCATTGAAGTCTCACCCATCA 60.026 50.000 0.00 0.00 0.00 3.07
8848 18183 0.698238 CCCCATTGAAGTCTCACCCA 59.302 55.000 0.00 0.00 0.00 4.51
8851 18186 5.011023 ACAAATTTCCCCATTGAAGTCTCAC 59.989 40.000 0.00 0.00 0.00 3.51
8857 18192 6.369615 GTCATCAACAAATTTCCCCATTGAAG 59.630 38.462 0.00 0.00 30.46 3.02
8912 18250 3.007398 CCAAATGAAACATTTCGGGGGAA 59.993 43.478 6.73 0.00 40.01 3.97
8918 18256 6.046885 AGCAAAACCAAATGAAACATTTCG 57.953 33.333 6.73 4.04 40.01 3.46
8919 18257 7.967303 TCAAAGCAAAACCAAATGAAACATTTC 59.033 29.630 6.73 0.00 37.69 2.17


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.