Multiple sequence alignment - TraesCS3B01G590900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G590900 chr3B 100.000 6999 0 0 1 6999 815852890 815859888 0.000000e+00 12925.0
1 TraesCS3B01G590900 chr3D 90.313 3706 264 43 3326 6967 606316728 606313054 0.000000e+00 4767.0
2 TraesCS3B01G590900 chr3D 93.152 1139 77 1 828 1965 606317931 606316793 0.000000e+00 1670.0
3 TraesCS3B01G590900 chr3D 88.305 419 25 6 404 800 606318339 606317923 1.370000e-131 481.0
4 TraesCS3B01G590900 chr3D 84.532 278 38 3 6640 6917 411614359 411614631 3.220000e-68 270.0
5 TraesCS3B01G590900 chr3D 90.683 161 12 3 104 261 606319209 606319049 1.980000e-50 211.0
6 TraesCS3B01G590900 chr3A 88.568 3805 305 58 3250 6991 737894846 737898583 0.000000e+00 4497.0
7 TraesCS3B01G590900 chr3A 92.134 1373 101 5 587 1953 737893475 737894846 0.000000e+00 1930.0
8 TraesCS3B01G590900 chr3A 87.762 286 26 6 253 534 737892908 737893188 6.770000e-85 326.0
9 TraesCS3B01G590900 chr3A 91.925 161 10 3 104 261 737892711 737892871 9.140000e-54 222.0
10 TraesCS3B01G590900 chr4D 89.401 651 40 16 1955 2576 5278897 5278247 0.000000e+00 793.0
11 TraesCS3B01G590900 chr4D 92.308 429 31 2 2754 3182 5277462 5277036 6.000000e-170 608.0
12 TraesCS3B01G590900 chr4D 85.340 382 51 5 977 1355 348054828 348054449 2.370000e-104 390.0
13 TraesCS3B01G590900 chr4D 94.828 174 9 0 2582 2755 5278156 5277983 8.950000e-69 272.0
14 TraesCS3B01G590900 chr4D 86.957 115 15 0 1717 1831 348054103 348053989 5.700000e-26 130.0
15 TraesCS3B01G590900 chr4A 86.538 364 44 5 977 1337 117669475 117669836 5.090000e-106 396.0
16 TraesCS3B01G590900 chr4A 85.470 117 17 0 1717 1833 117670203 117670319 9.530000e-24 122.0
17 TraesCS3B01G590900 chr4B 84.856 383 51 7 977 1355 428211607 428211228 5.120000e-101 379.0
18 TraesCS3B01G590900 chr4B 86.325 117 16 0 1717 1833 428210884 428210768 2.050000e-25 128.0
19 TraesCS3B01G590900 chr7A 85.217 345 43 8 998 1337 78670637 78670296 1.440000e-91 348.0
20 TraesCS3B01G590900 chr7A 88.571 70 8 0 3182 3251 611911583 611911514 1.250000e-12 86.1
21 TraesCS3B01G590900 chr2A 85.971 278 38 1 6640 6917 750999595 750999871 5.310000e-76 296.0
22 TraesCS3B01G590900 chr2A 93.103 58 4 0 3125 3182 394798856 394798799 1.250000e-12 86.1
23 TraesCS3B01G590900 chr2A 93.103 58 4 0 3125 3182 406410670 406410727 1.250000e-12 86.1
24 TraesCS3B01G590900 chr7B 85.357 280 37 3 6640 6917 385923173 385922896 3.190000e-73 287.0
25 TraesCS3B01G590900 chr7B 80.997 321 52 8 2594 2910 3018344 3018029 5.420000e-61 246.0
26 TraesCS3B01G590900 chr7B 97.015 67 2 0 3185 3251 648472813 648472879 5.740000e-21 113.0
27 TraesCS3B01G590900 chr7B 89.773 88 8 1 1250 1337 19659131 19659045 2.060000e-20 111.0
28 TraesCS3B01G590900 chr6D 84.429 289 43 2 6630 6917 53605478 53605765 4.130000e-72 283.0
29 TraesCS3B01G590900 chr2D 86.694 248 30 2 6670 6917 48604964 48605208 8.950000e-69 272.0
30 TraesCS3B01G590900 chr2D 89.062 64 5 2 3120 3182 262587333 262587271 2.090000e-10 78.7
31 TraesCS3B01G590900 chr5B 84.364 275 41 2 6640 6914 126264576 126264304 1.160000e-67 268.0
32 TraesCS3B01G590900 chr5B 89.062 64 5 2 3120 3182 253770706 253770644 2.090000e-10 78.7
33 TraesCS3B01G590900 chr2B 84.173 278 34 5 6639 6916 118717303 118717036 1.940000e-65 261.0
34 TraesCS3B01G590900 chrUn 91.379 58 5 0 3125 3182 244074361 244074418 5.820000e-11 80.5
35 TraesCS3B01G590900 chrUn 91.379 58 5 0 3125 3182 256064456 256064399 5.820000e-11 80.5
36 TraesCS3B01G590900 chrUn 91.379 58 5 0 3125 3182 268675014 268674957 5.820000e-11 80.5
37 TraesCS3B01G590900 chrUn 82.143 84 14 1 3171 3254 333351945 333352027 3.500000e-08 71.3
38 TraesCS3B01G590900 chr1B 87.500 72 5 3 3112 3182 161549795 161549727 5.820000e-11 80.5
39 TraesCS3B01G590900 chr7D 79.268 82 16 1 3171 3252 193943091 193943171 1.000000e-03 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G590900 chr3B 815852890 815859888 6998 False 12925.000000 12925 100.00000 1 6999 1 chr3B.!!$F1 6998
1 TraesCS3B01G590900 chr3D 606313054 606319209 6155 True 1782.250000 4767 90.61325 104 6967 4 chr3D.!!$R1 6863
2 TraesCS3B01G590900 chr3A 737892711 737898583 5872 False 1743.750000 4497 90.09725 104 6991 4 chr3A.!!$F1 6887
3 TraesCS3B01G590900 chr4D 5277036 5278897 1861 True 557.666667 793 92.17900 1955 3182 3 chr4D.!!$R1 1227
4 TraesCS3B01G590900 chr4D 348053989 348054828 839 True 260.000000 390 86.14850 977 1831 2 chr4D.!!$R2 854
5 TraesCS3B01G590900 chr4A 117669475 117670319 844 False 259.000000 396 86.00400 977 1833 2 chr4A.!!$F1 856
6 TraesCS3B01G590900 chr4B 428210768 428211607 839 True 253.500000 379 85.59050 977 1833 2 chr4B.!!$R1 856

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
84 85 0.175989 GTTCTGGGCTTACTCTCGGG 59.824 60.0 0.00 0.0 0.00 5.14 F
101 102 0.744874 GGGCGCATGACTCACTAGTA 59.255 55.0 10.83 0.0 35.56 1.82 F
1239 2054 0.108377 CTGCGCCCAAAATTTACCCC 60.108 55.0 4.18 0.0 0.00 4.95 F
2403 3287 0.324614 TGTGTCCATTCAGACGCCAT 59.675 50.0 3.06 0.0 44.84 4.40 F
2434 3318 0.451383 GCACAATGATGCGGTTGCTA 59.549 50.0 0.00 0.0 43.34 3.49 F
2821 4312 0.532862 CCAAGCAGGTTGTGTCTCGT 60.533 55.0 11.38 0.0 33.87 4.18 F
3199 4690 0.604780 AGCTGATGTGGACAGTGTGC 60.605 55.0 8.00 8.0 37.64 4.57 F
3200 4691 0.886043 GCTGATGTGGACAGTGTGCA 60.886 55.0 14.10 14.1 37.64 4.57 F
4960 6472 0.830648 TGGAGCTTGGTATTCCTCCG 59.169 55.0 0.00 0.0 45.36 4.63 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1107 1921 0.475475 TGACCCCCATCATGAGCATC 59.525 55.000 0.09 0.0 0.00 3.91 R
1454 2270 0.733150 GCCGCCTCCTGAAATGTTAC 59.267 55.000 0.00 0.0 0.00 2.50 R
2540 3424 0.332632 TTAAAGGCTGGGATGCTGCT 59.667 50.000 0.00 0.0 0.00 4.24 R
3213 4704 1.646977 AGTTGCTCCCTACTACTCCCT 59.353 52.381 0.00 0.0 0.00 4.20 R
3509 5009 2.808543 CCACTGACAAACTGAGGCTAAC 59.191 50.000 0.00 0.0 0.00 2.34 R
4777 6289 0.250901 CCTGCACCAAACCTACTGCT 60.251 55.000 0.00 0.0 0.00 4.24 R
4801 6313 2.785269 TGCCCTTGATGATATCACCCTT 59.215 45.455 7.78 0.0 39.39 3.95 R
5113 6626 2.989909 TGTCCATCTCAATTGCATCGT 58.010 42.857 0.00 0.0 0.00 3.73 R
6283 7838 1.002888 CATGAAGGTGTCAGAGGCAGT 59.997 52.381 0.00 0.0 40.43 4.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 6.983906 ACTCATTTTTCCAGGAGAATTTGT 57.016 33.333 0.00 0.00 33.44 2.83
25 26 6.752168 ACTCATTTTTCCAGGAGAATTTGTG 58.248 36.000 0.00 0.00 33.44 3.33
26 27 6.324770 ACTCATTTTTCCAGGAGAATTTGTGT 59.675 34.615 0.00 0.39 33.44 3.72
27 28 7.123355 TCATTTTTCCAGGAGAATTTGTGTT 57.877 32.000 0.00 0.00 33.44 3.32
28 29 6.985645 TCATTTTTCCAGGAGAATTTGTGTTG 59.014 34.615 0.00 0.00 33.44 3.33
29 30 5.930837 TTTTCCAGGAGAATTTGTGTTGT 57.069 34.783 0.00 0.00 33.44 3.32
30 31 7.411486 TTTTTCCAGGAGAATTTGTGTTGTA 57.589 32.000 0.00 0.00 33.44 2.41
31 32 6.633500 TTTCCAGGAGAATTTGTGTTGTAG 57.367 37.500 0.00 0.00 33.44 2.74
32 33 4.072131 TCCAGGAGAATTTGTGTTGTAGC 58.928 43.478 0.00 0.00 0.00 3.58
33 34 4.074970 CCAGGAGAATTTGTGTTGTAGCT 58.925 43.478 0.00 0.00 0.00 3.32
34 35 5.012664 TCCAGGAGAATTTGTGTTGTAGCTA 59.987 40.000 0.00 0.00 0.00 3.32
35 36 5.705441 CCAGGAGAATTTGTGTTGTAGCTAA 59.295 40.000 0.00 0.00 0.00 3.09
36 37 6.206634 CCAGGAGAATTTGTGTTGTAGCTAAA 59.793 38.462 0.00 0.00 0.00 1.85
37 38 7.255451 CCAGGAGAATTTGTGTTGTAGCTAAAA 60.255 37.037 0.00 0.00 0.00 1.52
38 39 8.134895 CAGGAGAATTTGTGTTGTAGCTAAAAA 58.865 33.333 0.00 0.00 0.00 1.94
39 40 8.860088 AGGAGAATTTGTGTTGTAGCTAAAAAT 58.140 29.630 0.00 0.00 0.00 1.82
40 41 8.915654 GGAGAATTTGTGTTGTAGCTAAAAATG 58.084 33.333 0.00 0.00 0.00 2.32
41 42 8.816640 AGAATTTGTGTTGTAGCTAAAAATGG 57.183 30.769 0.00 0.00 0.00 3.16
42 43 8.637986 AGAATTTGTGTTGTAGCTAAAAATGGA 58.362 29.630 0.00 0.00 0.00 3.41
43 44 8.587952 AATTTGTGTTGTAGCTAAAAATGGAC 57.412 30.769 0.00 0.00 0.00 4.02
44 45 6.701145 TTGTGTTGTAGCTAAAAATGGACA 57.299 33.333 0.00 0.00 0.00 4.02
45 46 6.701145 TGTGTTGTAGCTAAAAATGGACAA 57.299 33.333 0.00 0.00 0.00 3.18
46 47 7.101652 TGTGTTGTAGCTAAAAATGGACAAA 57.898 32.000 0.00 0.00 0.00 2.83
47 48 7.721402 TGTGTTGTAGCTAAAAATGGACAAAT 58.279 30.769 0.00 0.00 0.00 2.32
48 49 8.200792 TGTGTTGTAGCTAAAAATGGACAAATT 58.799 29.630 0.00 0.00 0.00 1.82
49 50 8.699749 GTGTTGTAGCTAAAAATGGACAAATTC 58.300 33.333 0.00 0.00 0.00 2.17
50 51 8.637986 TGTTGTAGCTAAAAATGGACAAATTCT 58.362 29.630 0.00 0.00 0.00 2.40
51 52 9.476202 GTTGTAGCTAAAAATGGACAAATTCTT 57.524 29.630 0.00 0.00 0.00 2.52
52 53 9.474920 TTGTAGCTAAAAATGGACAAATTCTTG 57.525 29.630 0.00 0.00 38.61 3.02
53 54 8.855110 TGTAGCTAAAAATGGACAAATTCTTGA 58.145 29.630 0.00 0.00 36.33 3.02
54 55 9.129209 GTAGCTAAAAATGGACAAATTCTTGAC 57.871 33.333 0.00 0.00 36.33 3.18
55 56 6.863126 AGCTAAAAATGGACAAATTCTTGACG 59.137 34.615 0.00 0.00 36.33 4.35
56 57 6.640907 GCTAAAAATGGACAAATTCTTGACGT 59.359 34.615 0.00 0.00 36.33 4.34
57 58 7.148967 GCTAAAAATGGACAAATTCTTGACGTC 60.149 37.037 9.11 9.11 36.33 4.34
58 59 4.404507 AATGGACAAATTCTTGACGTCG 57.595 40.909 11.62 0.00 36.33 5.12
59 60 2.828877 TGGACAAATTCTTGACGTCGT 58.171 42.857 11.62 0.00 36.33 4.34
60 61 2.542178 TGGACAAATTCTTGACGTCGTG 59.458 45.455 11.62 6.17 36.33 4.35
61 62 2.096417 GGACAAATTCTTGACGTCGTGG 60.096 50.000 11.62 3.52 36.33 4.94
62 63 1.263217 ACAAATTCTTGACGTCGTGGC 59.737 47.619 11.62 0.00 36.33 5.01
63 64 0.872388 AAATTCTTGACGTCGTGGCC 59.128 50.000 11.62 0.00 0.00 5.36
64 65 0.953960 AATTCTTGACGTCGTGGCCC 60.954 55.000 11.62 0.00 0.00 5.80
65 66 3.851845 TTCTTGACGTCGTGGCCCG 62.852 63.158 11.62 3.30 38.13 6.13
66 67 4.657824 CTTGACGTCGTGGCCCGT 62.658 66.667 11.62 4.34 40.54 5.28
67 68 4.224274 TTGACGTCGTGGCCCGTT 62.224 61.111 11.62 0.50 37.44 4.44
68 69 4.651008 TGACGTCGTGGCCCGTTC 62.651 66.667 11.62 8.77 37.44 3.95
69 70 4.353437 GACGTCGTGGCCCGTTCT 62.353 66.667 0.63 0.00 37.44 3.01
70 71 4.657824 ACGTCGTGGCCCGTTCTG 62.658 66.667 12.46 5.10 37.94 3.02
81 82 3.742983 CCGTTCTGGGCTTACTCTC 57.257 57.895 0.00 0.00 0.00 3.20
82 83 0.179134 CCGTTCTGGGCTTACTCTCG 60.179 60.000 0.00 0.00 0.00 4.04
83 84 0.179134 CGTTCTGGGCTTACTCTCGG 60.179 60.000 0.00 0.00 0.00 4.63
84 85 0.175989 GTTCTGGGCTTACTCTCGGG 59.824 60.000 0.00 0.00 0.00 5.14
85 86 1.614241 TTCTGGGCTTACTCTCGGGC 61.614 60.000 0.00 0.00 0.00 6.13
86 87 3.432051 CTGGGCTTACTCTCGGGCG 62.432 68.421 0.00 0.00 0.00 6.13
87 88 4.893601 GGGCTTACTCTCGGGCGC 62.894 72.222 0.00 0.00 0.00 6.53
88 89 4.143333 GGCTTACTCTCGGGCGCA 62.143 66.667 10.83 0.00 0.00 6.09
89 90 2.107141 GCTTACTCTCGGGCGCAT 59.893 61.111 10.83 0.00 0.00 4.73
90 91 2.240500 GCTTACTCTCGGGCGCATG 61.241 63.158 10.83 0.00 0.00 4.06
91 92 1.437573 CTTACTCTCGGGCGCATGA 59.562 57.895 10.83 4.99 0.00 3.07
92 93 0.872021 CTTACTCTCGGGCGCATGAC 60.872 60.000 10.83 0.00 0.00 3.06
93 94 1.320344 TTACTCTCGGGCGCATGACT 61.320 55.000 10.83 0.00 0.00 3.41
94 95 1.725557 TACTCTCGGGCGCATGACTC 61.726 60.000 10.83 0.00 0.00 3.36
95 96 3.068064 TCTCGGGCGCATGACTCA 61.068 61.111 10.83 0.00 0.00 3.41
96 97 2.887568 CTCGGGCGCATGACTCAC 60.888 66.667 10.83 0.00 0.00 3.51
97 98 3.362399 CTCGGGCGCATGACTCACT 62.362 63.158 10.83 0.00 0.00 3.41
98 99 2.004808 CTCGGGCGCATGACTCACTA 62.005 60.000 10.83 0.00 0.00 2.74
99 100 1.589993 CGGGCGCATGACTCACTAG 60.590 63.158 10.83 0.00 0.00 2.57
100 101 1.517832 GGGCGCATGACTCACTAGT 59.482 57.895 10.83 0.00 39.21 2.57
101 102 0.744874 GGGCGCATGACTCACTAGTA 59.255 55.000 10.83 0.00 35.56 1.82
102 103 1.136305 GGGCGCATGACTCACTAGTAA 59.864 52.381 10.83 0.00 35.56 2.24
181 182 1.660560 AATGCTGGATGGCGAACTGC 61.661 55.000 0.00 0.00 45.38 4.40
207 209 2.352960 GGTCAGTCATTGGATTCTTCGC 59.647 50.000 0.00 0.00 0.00 4.70
255 304 1.062810 AGGTGGAGGTGGGATCTACTC 60.063 57.143 0.00 0.00 0.00 2.59
300 349 8.401046 TGCAGTTCATTTTTACTTTACAACAC 57.599 30.769 0.00 0.00 0.00 3.32
302 351 9.030301 GCAGTTCATTTTTACTTTACAACACAT 57.970 29.630 0.00 0.00 0.00 3.21
358 408 6.785488 TGTAACATTTGCAACTAGTCTCTG 57.215 37.500 0.00 0.00 0.00 3.35
361 411 3.499918 ACATTTGCAACTAGTCTCTGCAC 59.500 43.478 18.08 0.00 45.31 4.57
374 424 5.174395 AGTCTCTGCACATCTGTCATTTAC 58.826 41.667 0.00 0.00 0.00 2.01
479 1053 7.395772 TGATGTTTTAGGGACTTGCATGATTTA 59.604 33.333 6.60 0.00 41.75 1.40
482 1056 7.178274 TGTTTTAGGGACTTGCATGATTTACAT 59.822 33.333 6.60 0.00 41.75 2.29
589 1383 8.403236 GGTACATTTCCACCACAATAATCTAAC 58.597 37.037 0.00 0.00 34.77 2.34
590 1384 7.083875 ACATTTCCACCACAATAATCTAACG 57.916 36.000 0.00 0.00 0.00 3.18
591 1385 6.657541 ACATTTCCACCACAATAATCTAACGT 59.342 34.615 0.00 0.00 0.00 3.99
592 1386 7.175990 ACATTTCCACCACAATAATCTAACGTT 59.824 33.333 5.88 5.88 0.00 3.99
593 1387 6.730960 TTCCACCACAATAATCTAACGTTC 57.269 37.500 2.82 0.00 0.00 3.95
594 1388 5.795972 TCCACCACAATAATCTAACGTTCA 58.204 37.500 2.82 0.00 0.00 3.18
629 1439 2.423926 AGTCTGTAGCAAGTCGTGTG 57.576 50.000 0.00 0.00 0.00 3.82
681 1491 5.712152 ATGGTTTGAGATGTTCTCCAAAC 57.288 39.130 16.03 16.03 42.73 2.93
819 1629 5.666462 TGCCGTAGCAGTTAGATCAAAATA 58.334 37.500 0.00 0.00 46.52 1.40
914 1724 6.529220 TGGATTTTCCCCACACAAAAATTAG 58.471 36.000 0.00 0.00 35.03 1.73
918 1728 5.523438 TTCCCCACACAAAAATTAGACAC 57.477 39.130 0.00 0.00 0.00 3.67
928 1739 8.626526 ACACAAAAATTAGACACGGATTTACTT 58.373 29.630 0.00 0.00 0.00 2.24
1107 1921 0.464036 TAGCCCTGCTCATACAACCG 59.536 55.000 0.00 0.00 40.44 4.44
1205 2019 5.300539 TCATCATCCTTTCTCTAGGTTCTCG 59.699 44.000 0.00 0.00 36.63 4.04
1211 2025 5.132312 TCCTTTCTCTAGGTTCTCGGATCTA 59.868 44.000 0.00 0.00 36.63 1.98
1212 2026 5.239963 CCTTTCTCTAGGTTCTCGGATCTAC 59.760 48.000 0.00 0.00 0.00 2.59
1227 2041 1.745489 CTACCCTGAAACTGCGCCC 60.745 63.158 4.18 0.00 0.00 6.13
1239 2054 0.108377 CTGCGCCCAAAATTTACCCC 60.108 55.000 4.18 0.00 0.00 4.95
1240 2055 0.832135 TGCGCCCAAAATTTACCCCA 60.832 50.000 4.18 0.00 0.00 4.96
1308 2123 8.967664 TCCAGTTACTTCAACTAAAGCTTTTA 57.032 30.769 18.47 2.75 46.04 1.52
1337 2152 5.163457 GGGTGTTGAAACATGGAAGAAAGAA 60.163 40.000 0.00 0.00 41.59 2.52
1344 2159 5.948992 AACATGGAAGAAAGAAGCACTAC 57.051 39.130 0.00 0.00 0.00 2.73
1391 2206 3.858877 GCATCCTCTCGCTAGTACCATTG 60.859 52.174 0.00 0.00 0.00 2.82
1471 2287 2.972625 TCTGTAACATTTCAGGAGGCG 58.027 47.619 0.00 0.00 33.13 5.52
1474 2290 0.326595 TAACATTTCAGGAGGCGGCA 59.673 50.000 13.08 0.00 0.00 5.69
1524 2340 7.715265 ACATCAATAAACCTATAAGTCAGCG 57.285 36.000 0.00 0.00 0.00 5.18
1535 2351 9.826574 AACCTATAAGTCAGCGTTCATAAAATA 57.173 29.630 0.00 0.00 0.00 1.40
1548 2364 9.037737 GCGTTCATAAAATACATAGAACTACCA 57.962 33.333 0.00 0.00 34.71 3.25
1611 2430 2.265904 CGCCTACCGGATCCGATGA 61.266 63.158 35.42 17.88 42.83 2.92
1617 2436 1.996798 ACCGGATCCGATGACATAGT 58.003 50.000 35.42 18.39 42.83 2.12
1721 2574 4.133013 AGAGTTCGGTTGTTGTTGTAGT 57.867 40.909 0.00 0.00 0.00 2.73
1874 2728 6.423905 TCTGTTGCTTTACTTAGACATGTCAC 59.576 38.462 27.02 12.23 0.00 3.67
1940 2794 3.261643 TGTGCTCTGCTTTTCCTATCTCA 59.738 43.478 0.00 0.00 0.00 3.27
1942 2796 4.880696 GTGCTCTGCTTTTCCTATCTCATT 59.119 41.667 0.00 0.00 0.00 2.57
1946 2800 7.776969 TGCTCTGCTTTTCCTATCTCATTATTT 59.223 33.333 0.00 0.00 0.00 1.40
1990 2844 1.477105 GTTGCAGCGGAACTTTTGTC 58.523 50.000 5.87 0.00 0.00 3.18
1991 2845 1.065551 GTTGCAGCGGAACTTTTGTCT 59.934 47.619 5.87 0.00 0.00 3.41
2074 2929 2.517959 AGGCAGCAGCAAAATACTTCA 58.482 42.857 2.65 0.00 44.61 3.02
2083 2938 5.390991 GCAGCAAAATACTTCAGACACCTAC 60.391 44.000 0.00 0.00 0.00 3.18
2088 2943 5.683876 AATACTTCAGACACCTACAGCAT 57.316 39.130 0.00 0.00 0.00 3.79
2198 3082 2.885388 AGAAGATGGGTGAGGGAGAT 57.115 50.000 0.00 0.00 0.00 2.75
2199 3083 3.142579 AGAAGATGGGTGAGGGAGATT 57.857 47.619 0.00 0.00 0.00 2.40
2235 3119 1.825474 AGGCTCCCGTGATATATTCGG 59.175 52.381 17.66 17.66 43.30 4.30
2243 3127 3.256383 CCGTGATATATTCGGTGTACCCA 59.744 47.826 16.84 0.00 39.51 4.51
2269 3153 2.880268 TGGCGTCATCATGATTTCCATC 59.120 45.455 5.16 0.00 31.94 3.51
2297 3181 8.359060 TGAAAAACAGAAAACCCAATAAATCG 57.641 30.769 0.00 0.00 0.00 3.34
2317 3201 5.128992 TCGTGCGCCTATAATTAAGATGA 57.871 39.130 4.18 0.00 0.00 2.92
2324 3208 6.102663 CGCCTATAATTAAGATGAGTGAGGG 58.897 44.000 0.00 0.00 0.00 4.30
2331 3215 5.916661 TTAAGATGAGTGAGGGACAGTAC 57.083 43.478 0.00 0.00 31.63 2.73
2338 3222 2.096248 GTGAGGGACAGTACAGAGGAG 58.904 57.143 0.00 0.00 0.00 3.69
2361 3245 2.609459 CACCAAGATACCTGATGCGTTC 59.391 50.000 0.00 0.00 0.00 3.95
2372 3256 4.759693 ACCTGATGCGTTCATGTTAGAAAA 59.240 37.500 0.00 0.00 29.95 2.29
2399 3283 3.861840 ACCTTATGTGTCCATTCAGACG 58.138 45.455 0.00 0.00 39.77 4.18
2403 3287 0.324614 TGTGTCCATTCAGACGCCAT 59.675 50.000 3.06 0.00 44.84 4.40
2409 3293 3.057596 GTCCATTCAGACGCCATTGAAAA 60.058 43.478 0.00 0.00 36.93 2.29
2434 3318 0.451383 GCACAATGATGCGGTTGCTA 59.549 50.000 0.00 0.00 43.34 3.49
2461 3345 2.517609 GGAATGCCCCTCGTCTACT 58.482 57.895 0.00 0.00 0.00 2.57
2497 3381 0.888736 CACCCGCTGTGTTTCCATCA 60.889 55.000 0.00 0.00 40.26 3.07
2504 3388 1.808945 CTGTGTTTCCATCACTCTGGC 59.191 52.381 0.00 0.00 36.16 4.85
2506 3390 0.684535 TGTTTCCATCACTCTGGCGA 59.315 50.000 0.00 0.00 36.16 5.54
2555 3439 2.691623 AGAGCAGCATCCCAGCCT 60.692 61.111 0.00 0.00 34.23 4.58
2567 3451 1.106285 CCCAGCCTTTAACAGCCATC 58.894 55.000 0.00 0.00 0.00 3.51
2576 3460 4.214545 CCTTTAACAGCCATCACACGTTAA 59.785 41.667 0.00 0.00 31.94 2.01
2578 3462 2.248280 ACAGCCATCACACGTTAACA 57.752 45.000 6.39 0.00 0.00 2.41
2579 3463 2.143122 ACAGCCATCACACGTTAACAG 58.857 47.619 6.39 0.00 0.00 3.16
2580 3464 2.224185 ACAGCCATCACACGTTAACAGA 60.224 45.455 6.39 0.00 0.00 3.41
2599 3568 4.965532 ACAGATCATCCTACTTAGGCACTT 59.034 41.667 0.00 0.00 43.31 3.16
2631 3600 0.981183 TTATGCCCCGTCTGTGACTT 59.019 50.000 0.00 0.00 0.00 3.01
2669 3638 2.125912 GTCATCAGCACGGCGAGT 60.126 61.111 16.62 0.00 0.00 4.18
2711 3680 1.811860 GGCAACCATGGACATGAGC 59.188 57.895 21.47 11.95 41.20 4.26
2738 3707 2.375110 CTCACACGCATGTCAAACAAC 58.625 47.619 0.00 0.00 36.72 3.32
2739 3708 2.013400 TCACACGCATGTCAAACAACT 58.987 42.857 0.00 0.00 36.72 3.16
2773 4264 0.970937 TGGCGAGCAAGCTACCTAGT 60.971 55.000 13.01 0.00 37.29 2.57
2792 4283 1.153086 GGAGTGATGGATGCGGCTT 60.153 57.895 0.00 0.00 0.00 4.35
2801 4292 4.349503 ATGCGGCTTGGACCTGCA 62.350 61.111 0.00 0.00 41.24 4.41
2821 4312 0.532862 CCAAGCAGGTTGTGTCTCGT 60.533 55.000 11.38 0.00 33.87 4.18
2829 4320 1.337823 GGTTGTGTCTCGTACCTGCAT 60.338 52.381 0.00 0.00 0.00 3.96
2830 4321 1.726791 GTTGTGTCTCGTACCTGCATG 59.273 52.381 0.00 0.00 0.00 4.06
2852 4343 2.202987 GAGCCAGAGGACGCATGG 60.203 66.667 0.00 0.00 37.15 3.66
2872 4363 3.947841 TGCACGCAGGTTTGACGC 61.948 61.111 0.00 0.00 0.00 5.19
2873 4364 3.947841 GCACGCAGGTTTGACGCA 61.948 61.111 0.00 0.00 0.00 5.24
2885 4376 2.736721 GTTTGACGCACTGCTAGAATCA 59.263 45.455 0.00 0.00 0.00 2.57
2891 4382 3.806521 ACGCACTGCTAGAATCAATGATC 59.193 43.478 0.00 0.00 0.00 2.92
2923 4414 0.998145 AAGCAGGGCCTGAGAAAGAT 59.002 50.000 37.07 4.12 32.44 2.40
2951 4442 8.519526 AGAAGACAGAACACTTGAAGATAGTAG 58.480 37.037 0.00 0.00 0.00 2.57
2973 4464 1.211709 CGATGGGGCGTTTGGAAAC 59.788 57.895 0.00 0.00 35.59 2.78
2980 4471 1.407618 GGGCGTTTGGAAACAGAAGTT 59.592 47.619 3.31 0.00 44.54 2.66
2982 4473 1.852280 GCGTTTGGAAACAGAAGTTGC 59.148 47.619 3.31 0.00 44.54 4.17
2985 4476 3.486841 CGTTTGGAAACAGAAGTTGCATG 59.513 43.478 3.31 0.00 44.54 4.06
2993 4484 2.361610 AAGTTGCATGCGGGAGGG 60.362 61.111 14.09 0.00 0.00 4.30
3003 4494 2.343426 GCGGGAGGGAAAAAGGCAG 61.343 63.158 0.00 0.00 0.00 4.85
3008 4499 1.881903 GAGGGAAAAAGGCAGCTGGC 61.882 60.000 31.58 31.58 43.74 4.85
3021 4512 2.273449 CTGGCCCATGGACCACTC 59.727 66.667 17.04 0.00 0.00 3.51
3043 4534 2.128035 CATGCCTCGTCGGAGTTAATC 58.872 52.381 0.00 0.00 38.70 1.75
3089 4580 5.419542 CGGAGAGAATGTGGTCTTTGATAA 58.580 41.667 0.00 0.00 0.00 1.75
3098 4589 9.132521 GAATGTGGTCTTTGATAATTTGTTCAG 57.867 33.333 0.00 0.00 0.00 3.02
3135 4626 9.531942 TTATTAACATGAAAATGATGATGTGGC 57.468 29.630 0.00 0.00 0.00 5.01
3168 4659 1.945394 GTGGATAGGCTGCATGTCAAG 59.055 52.381 12.84 0.00 0.00 3.02
3169 4660 1.839354 TGGATAGGCTGCATGTCAAGA 59.161 47.619 12.84 0.00 0.00 3.02
3170 4661 2.158856 TGGATAGGCTGCATGTCAAGAG 60.159 50.000 12.84 0.00 0.00 2.85
3171 4662 2.103771 GGATAGGCTGCATGTCAAGAGA 59.896 50.000 12.84 0.00 0.00 3.10
3172 4663 3.432749 GGATAGGCTGCATGTCAAGAGAA 60.433 47.826 12.84 0.00 0.00 2.87
3173 4664 2.574006 AGGCTGCATGTCAAGAGAAA 57.426 45.000 0.50 0.00 0.00 2.52
3174 4665 3.083122 AGGCTGCATGTCAAGAGAAAT 57.917 42.857 0.50 0.00 0.00 2.17
3175 4666 2.753452 AGGCTGCATGTCAAGAGAAATG 59.247 45.455 0.50 0.00 41.59 2.32
3176 4667 2.751259 GGCTGCATGTCAAGAGAAATGA 59.249 45.455 0.50 0.00 41.24 2.57
3177 4668 3.427233 GGCTGCATGTCAAGAGAAATGAC 60.427 47.826 0.50 0.00 41.24 3.06
3187 4678 6.946165 GTCAAGAGAAATGACATAGCTGATG 58.054 40.000 0.00 0.00 45.13 3.07
3197 4688 3.257469 CATAGCTGATGTGGACAGTGT 57.743 47.619 0.00 0.00 37.64 3.55
3198 4689 2.749280 TAGCTGATGTGGACAGTGTG 57.251 50.000 0.00 0.00 37.64 3.82
3199 4690 0.604780 AGCTGATGTGGACAGTGTGC 60.605 55.000 8.00 8.00 37.64 4.57
3200 4691 0.886043 GCTGATGTGGACAGTGTGCA 60.886 55.000 14.10 14.10 37.64 4.57
3201 4692 1.817357 CTGATGTGGACAGTGTGCAT 58.183 50.000 21.00 11.86 36.11 3.96
3202 4693 2.936553 GCTGATGTGGACAGTGTGCATA 60.937 50.000 21.00 18.48 36.11 3.14
3203 4694 3.337358 CTGATGTGGACAGTGTGCATAA 58.663 45.455 21.00 12.62 36.11 1.90
3204 4695 3.943381 CTGATGTGGACAGTGTGCATAAT 59.057 43.478 21.00 16.64 36.11 1.28
3205 4696 3.690628 TGATGTGGACAGTGTGCATAATG 59.309 43.478 21.00 9.47 36.11 1.90
3206 4697 3.415457 TGTGGACAGTGTGCATAATGA 57.585 42.857 21.00 0.47 36.11 2.57
3207 4698 3.337358 TGTGGACAGTGTGCATAATGAG 58.663 45.455 21.00 0.00 36.11 2.90
3208 4699 3.007831 TGTGGACAGTGTGCATAATGAGA 59.992 43.478 21.00 0.00 36.11 3.27
3209 4700 3.620374 GTGGACAGTGTGCATAATGAGAG 59.380 47.826 21.00 0.00 36.11 3.20
3210 4701 3.515104 TGGACAGTGTGCATAATGAGAGA 59.485 43.478 17.99 0.00 0.00 3.10
3211 4702 4.020307 TGGACAGTGTGCATAATGAGAGAA 60.020 41.667 17.99 0.00 0.00 2.87
3212 4703 5.121811 GGACAGTGTGCATAATGAGAGAAT 58.878 41.667 17.99 0.00 0.00 2.40
3213 4704 6.127083 TGGACAGTGTGCATAATGAGAGAATA 60.127 38.462 17.99 0.00 0.00 1.75
3214 4705 6.423302 GGACAGTGTGCATAATGAGAGAATAG 59.577 42.308 17.99 0.00 0.00 1.73
3215 4706 6.286758 ACAGTGTGCATAATGAGAGAATAGG 58.713 40.000 17.99 0.00 0.00 2.57
3216 4707 5.699915 CAGTGTGCATAATGAGAGAATAGGG 59.300 44.000 4.78 0.00 0.00 3.53
3217 4708 5.604231 AGTGTGCATAATGAGAGAATAGGGA 59.396 40.000 0.00 0.00 0.00 4.20
3218 4709 5.931146 GTGTGCATAATGAGAGAATAGGGAG 59.069 44.000 0.00 0.00 0.00 4.30
3219 4710 5.604231 TGTGCATAATGAGAGAATAGGGAGT 59.396 40.000 0.00 0.00 0.00 3.85
3220 4711 6.782494 TGTGCATAATGAGAGAATAGGGAGTA 59.218 38.462 0.00 0.00 0.00 2.59
3221 4712 7.039434 TGTGCATAATGAGAGAATAGGGAGTAG 60.039 40.741 0.00 0.00 0.00 2.57
3222 4713 7.013220 TGCATAATGAGAGAATAGGGAGTAGT 58.987 38.462 0.00 0.00 0.00 2.73
3223 4714 8.170730 TGCATAATGAGAGAATAGGGAGTAGTA 58.829 37.037 0.00 0.00 0.00 1.82
3224 4715 8.682710 GCATAATGAGAGAATAGGGAGTAGTAG 58.317 40.741 0.00 0.00 0.00 2.57
3225 4716 9.184523 CATAATGAGAGAATAGGGAGTAGTAGG 57.815 40.741 0.00 0.00 0.00 3.18
3226 4717 5.586155 TGAGAGAATAGGGAGTAGTAGGG 57.414 47.826 0.00 0.00 0.00 3.53
3227 4718 5.233143 TGAGAGAATAGGGAGTAGTAGGGA 58.767 45.833 0.00 0.00 0.00 4.20
3228 4719 5.311121 TGAGAGAATAGGGAGTAGTAGGGAG 59.689 48.000 0.00 0.00 0.00 4.30
3229 4720 4.043686 AGAGAATAGGGAGTAGTAGGGAGC 59.956 50.000 0.00 0.00 0.00 4.70
3230 4721 3.727923 AGAATAGGGAGTAGTAGGGAGCA 59.272 47.826 0.00 0.00 0.00 4.26
3231 4722 4.170251 AGAATAGGGAGTAGTAGGGAGCAA 59.830 45.833 0.00 0.00 0.00 3.91
3232 4723 2.162264 AGGGAGTAGTAGGGAGCAAC 57.838 55.000 0.00 0.00 0.00 4.17
3233 4724 1.646977 AGGGAGTAGTAGGGAGCAACT 59.353 52.381 0.00 0.00 0.00 3.16
3234 4725 2.044630 AGGGAGTAGTAGGGAGCAACTT 59.955 50.000 0.00 0.00 0.00 2.66
3235 4726 2.431419 GGGAGTAGTAGGGAGCAACTTC 59.569 54.545 0.00 0.00 0.00 3.01
3236 4727 3.367321 GGAGTAGTAGGGAGCAACTTCT 58.633 50.000 0.00 0.00 0.00 2.85
3237 4728 3.770388 GGAGTAGTAGGGAGCAACTTCTT 59.230 47.826 0.00 0.00 0.00 2.52
3238 4729 4.954826 GGAGTAGTAGGGAGCAACTTCTTA 59.045 45.833 0.00 0.00 0.00 2.10
3239 4730 5.421374 GGAGTAGTAGGGAGCAACTTCTTAA 59.579 44.000 0.00 0.00 0.00 1.85
3240 4731 6.406065 GGAGTAGTAGGGAGCAACTTCTTAAG 60.406 46.154 0.00 0.00 0.00 1.85
3241 4732 6.254522 AGTAGTAGGGAGCAACTTCTTAAGA 58.745 40.000 0.00 0.00 0.00 2.10
3242 4733 6.724905 AGTAGTAGGGAGCAACTTCTTAAGAA 59.275 38.462 16.85 16.85 0.00 2.52
3243 4734 6.435292 AGTAGGGAGCAACTTCTTAAGAAA 57.565 37.500 18.25 3.70 33.07 2.52
3244 4735 6.468543 AGTAGGGAGCAACTTCTTAAGAAAG 58.531 40.000 18.25 14.11 33.07 2.62
3245 4736 4.657013 AGGGAGCAACTTCTTAAGAAAGG 58.343 43.478 18.25 10.55 33.07 3.11
3246 4737 4.104897 AGGGAGCAACTTCTTAAGAAAGGT 59.895 41.667 18.25 15.44 33.07 3.50
3247 4738 5.309806 AGGGAGCAACTTCTTAAGAAAGGTA 59.690 40.000 18.25 0.00 33.07 3.08
3248 4739 5.644206 GGGAGCAACTTCTTAAGAAAGGTAG 59.356 44.000 18.25 9.16 33.07 3.18
3249 4740 6.465084 GGAGCAACTTCTTAAGAAAGGTAGA 58.535 40.000 18.25 0.00 33.07 2.59
3258 4750 9.308318 CTTCTTAAGAAAGGTAGATGAGTAAGC 57.692 37.037 18.25 0.00 33.07 3.09
3273 4765 5.312895 TGAGTAAGCAACCTTAATCTGCAA 58.687 37.500 10.85 0.00 44.67 4.08
3279 4771 3.055891 GCAACCTTAATCTGCAAATGGGT 60.056 43.478 0.00 0.00 36.09 4.51
3309 4801 7.856145 ATATTCAGAAATGTTGTGAGAGACC 57.144 36.000 0.00 0.00 34.20 3.85
3310 4802 3.653344 TCAGAAATGTTGTGAGAGACCG 58.347 45.455 0.00 0.00 0.00 4.79
3316 4808 3.469008 TGTTGTGAGAGACCGATGTTT 57.531 42.857 0.00 0.00 0.00 2.83
3317 4809 3.804036 TGTTGTGAGAGACCGATGTTTT 58.196 40.909 0.00 0.00 0.00 2.43
3410 4908 7.734924 ACATGCATCACGAGATTTATTACAT 57.265 32.000 0.00 0.00 30.20 2.29
3467 4967 8.948631 TGATAGATTTCTTGTCCACTAACATC 57.051 34.615 0.00 0.00 0.00 3.06
3477 4977 4.532126 TGTCCACTAACATCCAGAGAACAT 59.468 41.667 0.00 0.00 0.00 2.71
3479 4979 6.043411 GTCCACTAACATCCAGAGAACATAC 58.957 44.000 0.00 0.00 0.00 2.39
3509 5009 9.503399 AAATAGTAAAGGGTAGAAGTCTTTGTG 57.497 33.333 0.00 0.00 33.44 3.33
3520 5020 4.101741 AGAAGTCTTTGTGTTAGCCTCAGT 59.898 41.667 0.00 0.00 0.00 3.41
3521 5021 4.423625 AGTCTTTGTGTTAGCCTCAGTT 57.576 40.909 0.00 0.00 0.00 3.16
3536 5036 3.069586 CCTCAGTTTGTCAGTGGAGTGTA 59.930 47.826 0.00 0.00 0.00 2.90
3562 5062 5.678132 TGGCTTATTCATCAACATCATCG 57.322 39.130 0.00 0.00 0.00 3.84
3564 5064 5.007921 TGGCTTATTCATCAACATCATCGTG 59.992 40.000 0.00 0.00 0.00 4.35
3610 5110 4.448060 CCTTCTTGGTTGAAGTCGAAGTAC 59.552 45.833 0.00 0.00 41.17 2.73
3615 5115 5.728351 TGGTTGAAGTCGAAGTACAAAAG 57.272 39.130 0.00 0.00 0.00 2.27
3646 5146 6.321435 AGACCATACTCGATCAGTCATTTGTA 59.679 38.462 0.00 0.00 36.43 2.41
3650 5150 8.082242 CCATACTCGATCAGTCATTTGTATACA 58.918 37.037 0.08 0.08 36.43 2.29
3660 5160 3.631686 TCATTTGTATACACAGCATGCCC 59.368 43.478 15.66 0.00 42.53 5.36
3661 5161 2.051334 TTGTATACACAGCATGCCCC 57.949 50.000 15.66 0.00 42.53 5.80
3705 5205 7.099266 AGCACTAGTAATTAAATGCATGCAA 57.901 32.000 26.68 8.62 35.51 4.08
3706 5206 7.719483 AGCACTAGTAATTAAATGCATGCAAT 58.281 30.769 26.68 14.74 35.51 3.56
3715 5215 8.958119 AATTAAATGCATGCAATCTTGAGAAT 57.042 26.923 26.68 11.90 0.00 2.40
3727 5227 7.093640 TGCAATCTTGAGAATGAAAAGGCTATT 60.094 33.333 0.35 0.00 0.00 1.73
3733 5233 7.149569 TGAGAATGAAAAGGCTATTTGTCTG 57.850 36.000 0.00 0.00 0.00 3.51
3739 5239 7.575414 TGAAAAGGCTATTTGTCTGTGTTTA 57.425 32.000 0.00 0.00 0.00 2.01
3748 5248 7.591426 GCTATTTGTCTGTGTTTAAAGAAGTGG 59.409 37.037 0.00 0.00 0.00 4.00
3756 5256 8.296713 TCTGTGTTTAAAGAAGTGGCATATTTC 58.703 33.333 0.00 0.00 0.00 2.17
3768 5268 6.795399 AGTGGCATATTTCGTTGAAATTAGG 58.205 36.000 9.77 2.73 41.64 2.69
3842 5342 4.141711 TGTGCTATGGTTTCCCTATCTCAC 60.142 45.833 0.00 0.00 0.00 3.51
3845 5345 3.933861 ATGGTTTCCCTATCTCACCAC 57.066 47.619 0.00 0.00 40.33 4.16
3892 5392 2.948979 TCGGTGAGATTTGCACAAACTT 59.051 40.909 0.00 0.00 37.99 2.66
3941 5441 6.612456 AGAGATGAGATGAAGGAAATCACTCT 59.388 38.462 0.00 0.00 32.98 3.24
3953 5453 7.163001 AGGAAATCACTCTGGCTTTTTAATC 57.837 36.000 0.00 0.00 0.00 1.75
3954 5454 6.153510 AGGAAATCACTCTGGCTTTTTAATCC 59.846 38.462 0.00 0.00 0.00 3.01
3955 5455 6.071391 GGAAATCACTCTGGCTTTTTAATCCA 60.071 38.462 0.00 0.00 0.00 3.41
3960 5460 6.097554 TCACTCTGGCTTTTTAATCCACAAAA 59.902 34.615 0.00 0.00 0.00 2.44
3961 5461 6.930722 CACTCTGGCTTTTTAATCCACAAAAT 59.069 34.615 0.00 0.00 0.00 1.82
4001 5501 6.235231 TGGTAGGACATCTCACCTTTTATC 57.765 41.667 0.00 0.00 37.68 1.75
4131 5632 8.082672 TCATGAGATGAATGGTTTCTCTCTTA 57.917 34.615 0.00 3.31 37.22 2.10
4132 5633 8.712103 TCATGAGATGAATGGTTTCTCTCTTAT 58.288 33.333 0.00 4.77 37.22 1.73
4156 5658 6.688073 TTTTCCTCCTCTCTGAGTAACAAT 57.312 37.500 4.32 0.00 0.00 2.71
4188 5690 9.755804 TTCTGTAAACAATGCAATCAATACAAA 57.244 25.926 0.00 0.00 0.00 2.83
4229 5732 7.083858 ACTTGACGATAATCCACACAAAAATG 58.916 34.615 0.00 0.00 0.00 2.32
4268 5771 9.557061 GGAACCCTAGAAATACCTATGTTAAAG 57.443 37.037 0.00 0.00 0.00 1.85
4292 5795 8.488651 AGTTACTTTCCAGGTAAATCATAACG 57.511 34.615 0.00 0.00 32.06 3.18
4302 5805 7.173218 CCAGGTAAATCATAACGCTGACATTAT 59.827 37.037 0.00 0.00 0.00 1.28
4304 5807 9.772973 AGGTAAATCATAACGCTGACATTATAA 57.227 29.630 0.00 0.00 0.00 0.98
4327 5830 9.700831 ATAATTGGGCTTATGTTACTTCTTTCT 57.299 29.630 0.00 0.00 0.00 2.52
4362 5865 4.469657 TGGAAACTTGCTCCACTTTGTAT 58.530 39.130 0.00 0.00 38.07 2.29
4371 5874 4.407296 TGCTCCACTTTGTATTGGGTTTTT 59.593 37.500 0.00 0.00 33.25 1.94
4474 5983 4.639078 TGATTCCAGTGTTCAAGGATGA 57.361 40.909 0.00 0.00 0.00 2.92
4494 6003 7.067494 AGGATGATTTCATGCCACTAACTAAAC 59.933 37.037 8.26 0.00 44.46 2.01
4498 6007 4.014569 TCATGCCACTAACTAAACTGCA 57.985 40.909 0.00 0.00 0.00 4.41
4513 6022 9.777297 AACTAAACTGCATGAATAAAACCATTT 57.223 25.926 0.00 0.00 0.00 2.32
4610 6121 5.245531 ACAGGCATAATATGATTACCCACG 58.754 41.667 4.14 0.00 0.00 4.94
4685 6196 6.469782 TGACATACTAGCATCACTTCATCA 57.530 37.500 0.00 0.00 0.00 3.07
4733 6245 4.762289 ACATAGCTTCTTTCCTACTGGG 57.238 45.455 0.00 0.00 0.00 4.45
4801 6313 2.091555 AGTAGGTTTGGTGCAGGGAAAA 60.092 45.455 0.00 0.00 0.00 2.29
4831 6343 7.005902 TGATATCATCAAGGGCAAATACACAT 58.994 34.615 0.00 0.00 36.11 3.21
4960 6472 0.830648 TGGAGCTTGGTATTCCTCCG 59.169 55.000 0.00 0.00 45.36 4.63
5076 6589 8.850452 GTTTTATTTTGCTAAGTAGTGCACATC 58.150 33.333 21.04 11.31 39.05 3.06
5113 6626 5.935789 GTCTAGTAAATAGTGTGGTTGGCAA 59.064 40.000 0.00 0.00 32.85 4.52
5207 6720 6.990798 TGACAATGGTGCATTTGATAAAGAA 58.009 32.000 12.27 0.00 31.05 2.52
5209 6722 6.996509 ACAATGGTGCATTTGATAAAGAAGT 58.003 32.000 12.27 0.00 31.05 3.01
5233 6746 4.134563 GTTGACAAGGGTGTAGTTGACAT 58.865 43.478 0.00 0.00 41.14 3.06
5310 6823 6.579666 ATGCAGTTGACAATATGTTTCTGT 57.420 33.333 0.00 0.00 31.04 3.41
5328 6841 8.363390 TGTTTCTGTGGCATAATGTTTATCAAA 58.637 29.630 0.00 0.00 0.00 2.69
5330 6843 8.929827 TTCTGTGGCATAATGTTTATCAAATG 57.070 30.769 0.00 0.00 0.00 2.32
5332 6845 9.183368 TCTGTGGCATAATGTTTATCAAATGTA 57.817 29.630 0.00 0.00 0.00 2.29
5334 6847 9.964303 TGTGGCATAATGTTTATCAAATGTATC 57.036 29.630 0.00 0.00 0.00 2.24
5335 6848 9.964303 GTGGCATAATGTTTATCAAATGTATCA 57.036 29.630 0.00 0.00 0.00 2.15
5393 6906 3.762779 GCTTATTGCAACTCATGTGGTC 58.237 45.455 0.00 0.00 42.31 4.02
5395 6908 4.142315 GCTTATTGCAACTCATGTGGTCAT 60.142 41.667 0.00 0.00 42.31 3.06
5533 7050 0.819259 TGTTGCAGGTCTCAAGTGCC 60.819 55.000 0.00 0.00 36.31 5.01
5732 7253 0.109179 TCATTGCTGCAATCGTTGGC 60.109 50.000 24.04 0.00 31.05 4.52
5738 7259 1.870055 CTGCAATCGTTGGCCAGCTT 61.870 55.000 18.19 2.97 0.00 3.74
5765 7286 5.009610 TGCAAGGAAACTGATAAACTGGTTC 59.990 40.000 0.00 0.00 42.68 3.62
5789 7310 5.242393 CGGAAGGGCATCATTTATCATCTTT 59.758 40.000 0.00 0.00 0.00 2.52
5835 7356 2.361438 GGTGTGATTCCTCTAGGTACCG 59.639 54.545 6.18 0.00 36.34 4.02
5847 7368 5.435291 CTCTAGGTACCGGTTTCTCTCTTA 58.565 45.833 15.04 0.00 0.00 2.10
5862 7383 7.502060 TTCTCTCTTATGAATCCCTTCACTT 57.498 36.000 0.00 0.00 43.92 3.16
5869 7390 4.177537 TGAATCCCTTCACTTCAACCAA 57.822 40.909 0.00 0.00 36.46 3.67
5872 7393 1.850345 TCCCTTCACTTCAACCAACCT 59.150 47.619 0.00 0.00 0.00 3.50
5882 7403 2.698803 TCAACCAACCTCATCACATCG 58.301 47.619 0.00 0.00 0.00 3.84
5889 7410 4.509230 CCAACCTCATCACATCGTATCAAG 59.491 45.833 0.00 0.00 0.00 3.02
5947 7468 9.109393 GGTATCTTAAACATGAAGCACAAGATA 57.891 33.333 0.00 6.34 34.20 1.98
5988 7509 5.221682 TGGGATTTCATGACATTTGCAAGTT 60.222 36.000 0.00 0.00 0.00 2.66
6040 7562 5.639506 GCAAGTGACTAGTGTGATGTATGTT 59.360 40.000 0.00 0.00 0.00 2.71
6069 7591 4.105217 TGAGTGGATGGAATAGATGCCAAT 59.895 41.667 0.00 0.00 37.78 3.16
6106 7628 3.569701 TGGAAGATCAAAAGTTCAGCCAC 59.430 43.478 0.00 0.00 0.00 5.01
6156 7680 9.070179 CACCCAATGTAATCAATGATTAGATGA 57.930 33.333 21.37 6.45 37.47 2.92
6162 7686 8.452989 TGTAATCAATGATTAGATGACGATCG 57.547 34.615 15.28 14.88 35.54 3.69
6164 7688 7.573916 AATCAATGATTAGATGACGATCGTC 57.426 36.000 35.46 35.46 36.79 4.20
6180 7704 6.344500 ACGATCGTCCTTTAGTTACTAGAGA 58.656 40.000 16.60 0.00 0.00 3.10
6215 7770 3.249320 CCTACATCCAAACATGCTGATCG 59.751 47.826 0.00 0.00 0.00 3.69
6237 7792 6.387465 TCGTCCTTTCATACTTGACTAACTG 58.613 40.000 0.00 0.00 0.00 3.16
6283 7838 3.114668 TGTAAAAGGCTTGTCGCACTA 57.885 42.857 0.00 0.00 41.67 2.74
6291 7846 0.244994 CTTGTCGCACTACTGCCTCT 59.755 55.000 0.00 0.00 40.73 3.69
6443 8029 2.580589 CAACGCGGTAAAATCCAACAG 58.419 47.619 12.47 0.00 0.00 3.16
6454 8040 5.741388 AAAATCCAACAGAGCATATCGTC 57.259 39.130 0.00 0.00 0.00 4.20
6468 8054 6.288294 AGCATATCGTCTAGGCACAAAATAA 58.712 36.000 0.00 0.00 0.00 1.40
6523 8110 3.076032 ACTCATAAACTCCCCCAAGCTTT 59.924 43.478 0.00 0.00 0.00 3.51
6524 8111 4.089361 CTCATAAACTCCCCCAAGCTTTT 58.911 43.478 0.00 0.00 0.00 2.27
6528 8115 3.895704 AACTCCCCCAAGCTTTTAAGA 57.104 42.857 0.00 0.00 0.00 2.10
6530 8117 2.445525 ACTCCCCCAAGCTTTTAAGACA 59.554 45.455 0.00 0.00 0.00 3.41
6647 8234 7.121759 ACAAATCATGAAAACTCATACTCCCTG 59.878 37.037 0.00 0.00 0.00 4.45
6653 8240 4.820894 AAACTCATACTCCCTGTGTACC 57.179 45.455 0.00 0.00 0.00 3.34
6700 8287 8.533569 AAATCAAATAATCCCCGAACACTTAT 57.466 30.769 0.00 0.00 0.00 1.73
6748 8335 6.912051 TCGTTTCTTGTTTCTTGACATGAATG 59.088 34.615 0.00 0.00 40.85 2.67
6784 8371 3.444703 AAGAGATGTGAGGCGTGTATC 57.555 47.619 0.00 0.00 0.00 2.24
6814 8401 2.748532 GACTTGAGACTACCTAGCACGT 59.251 50.000 0.00 0.00 0.00 4.49
6831 8418 1.343142 ACGTCATGCAGTGGTCAGTTA 59.657 47.619 0.00 0.00 0.00 2.24
6899 8486 1.227249 TTTCCCCTTCACCTTGGTCA 58.773 50.000 0.00 0.00 0.00 4.02
6900 8487 1.455822 TTCCCCTTCACCTTGGTCAT 58.544 50.000 0.00 0.00 0.00 3.06
6931 8518 9.601217 CACAACCTAAGAGCAAGTATAATAAGT 57.399 33.333 0.00 0.00 0.00 2.24
6991 8584 5.529060 GTGGTGAGTTCAATGAAAGAGAAGT 59.471 40.000 0.00 0.00 0.00 3.01
6992 8585 6.706270 GTGGTGAGTTCAATGAAAGAGAAGTA 59.294 38.462 0.00 0.00 0.00 2.24
6993 8586 7.389053 GTGGTGAGTTCAATGAAAGAGAAGTAT 59.611 37.037 0.00 0.00 0.00 2.12
6994 8587 8.593679 TGGTGAGTTCAATGAAAGAGAAGTATA 58.406 33.333 0.00 0.00 0.00 1.47
6995 8588 9.092876 GGTGAGTTCAATGAAAGAGAAGTATAG 57.907 37.037 0.00 0.00 0.00 1.31
6996 8589 9.862371 GTGAGTTCAATGAAAGAGAAGTATAGA 57.138 33.333 0.00 0.00 0.00 1.98
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.505585 ACACAAATTCTCCTGGAAAAATGAGTA 59.494 33.333 0.00 0.00 37.49 2.59
1 2 6.324770 ACACAAATTCTCCTGGAAAAATGAGT 59.675 34.615 0.00 0.00 37.49 3.41
2 3 6.752168 ACACAAATTCTCCTGGAAAAATGAG 58.248 36.000 0.00 0.00 37.49 2.90
3 4 6.729690 ACACAAATTCTCCTGGAAAAATGA 57.270 33.333 0.00 0.00 37.49 2.57
4 5 6.762661 ACAACACAAATTCTCCTGGAAAAATG 59.237 34.615 0.00 0.00 37.49 2.32
5 6 6.888105 ACAACACAAATTCTCCTGGAAAAAT 58.112 32.000 0.00 0.00 37.49 1.82
6 7 6.293004 ACAACACAAATTCTCCTGGAAAAA 57.707 33.333 0.00 0.00 37.49 1.94
7 8 5.930837 ACAACACAAATTCTCCTGGAAAA 57.069 34.783 0.00 0.00 37.49 2.29
8 9 5.009610 GCTACAACACAAATTCTCCTGGAAA 59.990 40.000 0.00 0.00 37.49 3.13
9 10 4.518970 GCTACAACACAAATTCTCCTGGAA 59.481 41.667 0.00 0.00 38.41 3.53
10 11 4.072131 GCTACAACACAAATTCTCCTGGA 58.928 43.478 0.00 0.00 0.00 3.86
11 12 4.074970 AGCTACAACACAAATTCTCCTGG 58.925 43.478 0.00 0.00 0.00 4.45
12 13 6.801539 TTAGCTACAACACAAATTCTCCTG 57.198 37.500 0.00 0.00 0.00 3.86
13 14 7.817418 TTTTAGCTACAACACAAATTCTCCT 57.183 32.000 0.00 0.00 0.00 3.69
14 15 8.915654 CATTTTTAGCTACAACACAAATTCTCC 58.084 33.333 0.00 0.00 0.00 3.71
15 16 8.915654 CCATTTTTAGCTACAACACAAATTCTC 58.084 33.333 0.00 0.00 0.00 2.87
16 17 8.637986 TCCATTTTTAGCTACAACACAAATTCT 58.362 29.630 0.00 0.00 0.00 2.40
17 18 8.699749 GTCCATTTTTAGCTACAACACAAATTC 58.300 33.333 0.00 0.00 0.00 2.17
18 19 8.200792 TGTCCATTTTTAGCTACAACACAAATT 58.799 29.630 0.00 0.00 0.00 1.82
19 20 7.721402 TGTCCATTTTTAGCTACAACACAAAT 58.279 30.769 0.00 0.00 0.00 2.32
20 21 7.101652 TGTCCATTTTTAGCTACAACACAAA 57.898 32.000 0.00 0.00 0.00 2.83
21 22 6.701145 TGTCCATTTTTAGCTACAACACAA 57.299 33.333 0.00 0.00 0.00 3.33
22 23 6.701145 TTGTCCATTTTTAGCTACAACACA 57.299 33.333 0.00 0.00 0.00 3.72
23 24 8.587952 AATTTGTCCATTTTTAGCTACAACAC 57.412 30.769 0.00 0.00 0.00 3.32
24 25 8.637986 AGAATTTGTCCATTTTTAGCTACAACA 58.362 29.630 0.00 0.00 0.00 3.33
25 26 9.476202 AAGAATTTGTCCATTTTTAGCTACAAC 57.524 29.630 0.00 0.00 0.00 3.32
26 27 9.474920 CAAGAATTTGTCCATTTTTAGCTACAA 57.525 29.630 0.00 0.00 0.00 2.41
27 28 8.855110 TCAAGAATTTGTCCATTTTTAGCTACA 58.145 29.630 0.00 0.00 35.73 2.74
28 29 9.129209 GTCAAGAATTTGTCCATTTTTAGCTAC 57.871 33.333 0.00 0.00 35.73 3.58
29 30 8.020819 CGTCAAGAATTTGTCCATTTTTAGCTA 58.979 33.333 0.00 0.00 35.73 3.32
30 31 6.863126 CGTCAAGAATTTGTCCATTTTTAGCT 59.137 34.615 0.00 0.00 35.73 3.32
31 32 6.640907 ACGTCAAGAATTTGTCCATTTTTAGC 59.359 34.615 0.00 0.00 35.73 3.09
32 33 7.059488 CGACGTCAAGAATTTGTCCATTTTTAG 59.941 37.037 17.16 0.00 35.73 1.85
33 34 6.853872 CGACGTCAAGAATTTGTCCATTTTTA 59.146 34.615 17.16 0.00 35.73 1.52
34 35 5.685511 CGACGTCAAGAATTTGTCCATTTTT 59.314 36.000 17.16 0.00 35.73 1.94
35 36 5.212194 CGACGTCAAGAATTTGTCCATTTT 58.788 37.500 17.16 0.00 35.73 1.82
36 37 4.274950 ACGACGTCAAGAATTTGTCCATTT 59.725 37.500 17.16 0.00 35.73 2.32
37 38 3.813166 ACGACGTCAAGAATTTGTCCATT 59.187 39.130 17.16 0.00 35.73 3.16
38 39 3.186409 CACGACGTCAAGAATTTGTCCAT 59.814 43.478 17.16 0.00 35.73 3.41
39 40 2.542178 CACGACGTCAAGAATTTGTCCA 59.458 45.455 17.16 0.00 35.73 4.02
40 41 2.096417 CCACGACGTCAAGAATTTGTCC 60.096 50.000 17.16 0.00 35.73 4.02
41 42 2.661979 GCCACGACGTCAAGAATTTGTC 60.662 50.000 17.16 0.00 35.73 3.18
42 43 1.263217 GCCACGACGTCAAGAATTTGT 59.737 47.619 17.16 0.00 35.73 2.83
43 44 1.399727 GGCCACGACGTCAAGAATTTG 60.400 52.381 17.16 0.00 35.57 2.32
44 45 0.872388 GGCCACGACGTCAAGAATTT 59.128 50.000 17.16 0.00 0.00 1.82
45 46 0.953960 GGGCCACGACGTCAAGAATT 60.954 55.000 17.16 0.00 0.00 2.17
46 47 1.375523 GGGCCACGACGTCAAGAAT 60.376 57.895 17.16 0.00 0.00 2.40
47 48 2.029964 GGGCCACGACGTCAAGAA 59.970 61.111 17.16 0.00 0.00 2.52
63 64 0.179134 CGAGAGTAAGCCCAGAACGG 60.179 60.000 0.00 0.00 0.00 4.44
64 65 0.179134 CCGAGAGTAAGCCCAGAACG 60.179 60.000 0.00 0.00 0.00 3.95
65 66 0.175989 CCCGAGAGTAAGCCCAGAAC 59.824 60.000 0.00 0.00 0.00 3.01
66 67 1.614241 GCCCGAGAGTAAGCCCAGAA 61.614 60.000 0.00 0.00 0.00 3.02
67 68 2.058595 GCCCGAGAGTAAGCCCAGA 61.059 63.158 0.00 0.00 0.00 3.86
68 69 2.501610 GCCCGAGAGTAAGCCCAG 59.498 66.667 0.00 0.00 0.00 4.45
69 70 3.458163 CGCCCGAGAGTAAGCCCA 61.458 66.667 0.00 0.00 0.00 5.36
70 71 4.893601 GCGCCCGAGAGTAAGCCC 62.894 72.222 0.00 0.00 0.00 5.19
71 72 3.447025 ATGCGCCCGAGAGTAAGCC 62.447 63.158 4.18 0.00 0.00 4.35
72 73 2.107141 ATGCGCCCGAGAGTAAGC 59.893 61.111 4.18 0.00 0.00 3.09
73 74 0.872021 GTCATGCGCCCGAGAGTAAG 60.872 60.000 4.18 0.00 0.00 2.34
74 75 1.141019 GTCATGCGCCCGAGAGTAA 59.859 57.895 4.18 0.00 0.00 2.24
75 76 1.725557 GAGTCATGCGCCCGAGAGTA 61.726 60.000 4.18 0.00 0.00 2.59
76 77 3.069980 GAGTCATGCGCCCGAGAGT 62.070 63.158 4.18 0.00 0.00 3.24
77 78 2.279120 GAGTCATGCGCCCGAGAG 60.279 66.667 4.18 0.00 0.00 3.20
78 79 3.068064 TGAGTCATGCGCCCGAGA 61.068 61.111 4.18 0.00 0.00 4.04
79 80 2.004808 TAGTGAGTCATGCGCCCGAG 62.005 60.000 4.18 0.00 0.00 4.63
80 81 2.004808 CTAGTGAGTCATGCGCCCGA 62.005 60.000 4.18 0.00 0.00 5.14
81 82 1.589993 CTAGTGAGTCATGCGCCCG 60.590 63.158 4.18 0.00 0.00 6.13
82 83 0.744874 TACTAGTGAGTCATGCGCCC 59.255 55.000 4.18 0.00 37.10 6.13
83 84 2.579207 TTACTAGTGAGTCATGCGCC 57.421 50.000 4.18 0.00 37.10 6.53
84 85 4.112634 TCAATTACTAGTGAGTCATGCGC 58.887 43.478 5.39 0.00 37.10 6.09
85 86 7.596621 ACATATCAATTACTAGTGAGTCATGCG 59.403 37.037 5.39 0.00 37.10 4.73
86 87 8.706936 CACATATCAATTACTAGTGAGTCATGC 58.293 37.037 5.39 0.00 37.10 4.06
87 88 8.706936 GCACATATCAATTACTAGTGAGTCATG 58.293 37.037 5.39 2.94 37.10 3.07
88 89 7.875041 GGCACATATCAATTACTAGTGAGTCAT 59.125 37.037 5.39 0.00 37.10 3.06
89 90 7.210174 GGCACATATCAATTACTAGTGAGTCA 58.790 38.462 5.39 0.00 37.10 3.41
90 91 6.363626 CGGCACATATCAATTACTAGTGAGTC 59.636 42.308 5.39 0.00 37.10 3.36
91 92 6.183360 ACGGCACATATCAATTACTAGTGAGT 60.183 38.462 5.39 0.00 39.92 3.41
92 93 6.144563 CACGGCACATATCAATTACTAGTGAG 59.855 42.308 5.39 0.00 31.05 3.51
93 94 5.983118 CACGGCACATATCAATTACTAGTGA 59.017 40.000 5.39 0.00 32.24 3.41
94 95 5.753438 ACACGGCACATATCAATTACTAGTG 59.247 40.000 5.39 0.00 0.00 2.74
95 96 5.914033 ACACGGCACATATCAATTACTAGT 58.086 37.500 0.00 0.00 0.00 2.57
96 97 6.844696 AACACGGCACATATCAATTACTAG 57.155 37.500 0.00 0.00 0.00 2.57
97 98 8.896320 ATTAACACGGCACATATCAATTACTA 57.104 30.769 0.00 0.00 0.00 1.82
98 99 7.801716 ATTAACACGGCACATATCAATTACT 57.198 32.000 0.00 0.00 0.00 2.24
99 100 8.742188 CAAATTAACACGGCACATATCAATTAC 58.258 33.333 0.00 0.00 0.00 1.89
100 101 7.918033 CCAAATTAACACGGCACATATCAATTA 59.082 33.333 0.00 0.00 0.00 1.40
101 102 6.756074 CCAAATTAACACGGCACATATCAATT 59.244 34.615 0.00 0.00 0.00 2.32
102 103 6.127479 ACCAAATTAACACGGCACATATCAAT 60.127 34.615 0.00 0.00 0.00 2.57
181 182 2.593468 ATCCAATGACTGACCCCGCG 62.593 60.000 0.00 0.00 0.00 6.46
183 184 1.210478 AGAATCCAATGACTGACCCCG 59.790 52.381 0.00 0.00 0.00 5.73
191 193 0.028110 GCCGCGAAGAATCCAATGAC 59.972 55.000 8.23 0.00 0.00 3.06
194 196 1.718757 GCTGCCGCGAAGAATCCAAT 61.719 55.000 8.23 0.00 0.00 3.16
220 222 2.903855 CCTAGCCCGCCAATGCTG 60.904 66.667 0.00 0.00 38.52 4.41
255 304 3.488047 GCATCCTCACATTTTGACATCGG 60.488 47.826 0.00 0.00 0.00 4.18
326 375 5.974751 AGTTGCAAATGTTACAACCTAAACG 59.025 36.000 0.00 0.00 43.68 3.60
350 400 5.411831 AAATGACAGATGTGCAGAGACTA 57.588 39.130 0.00 0.00 0.00 2.59
358 408 2.476185 GCACCGTAAATGACAGATGTGC 60.476 50.000 0.00 0.00 40.69 4.57
361 411 3.525537 AGAGCACCGTAAATGACAGATG 58.474 45.455 0.00 0.00 0.00 2.90
374 424 3.246226 GCACAATATGTAGAAGAGCACCG 59.754 47.826 0.00 0.00 0.00 4.94
479 1053 8.635765 AAGTAATGTTCAAAGGTACATGATGT 57.364 30.769 2.65 2.65 35.51 3.06
482 1056 9.126151 TGAAAAGTAATGTTCAAAGGTACATGA 57.874 29.630 0.00 0.00 35.51 3.07
548 1342 8.105829 TGGAAATGTACCATTAATTTTGCCATT 58.894 29.630 0.00 0.00 32.03 3.16
564 1358 8.120465 CGTTAGATTATTGTGGTGGAAATGTAC 58.880 37.037 0.00 0.00 0.00 2.90
601 1411 6.150641 ACGACTTGCTACAGACTATGAAGTAA 59.849 38.462 0.00 0.00 35.56 2.24
613 1423 2.218759 GTCAACACACGACTTGCTACAG 59.781 50.000 0.00 0.00 0.00 2.74
629 1439 1.628447 TATTGCCGCCGTTCGTCAAC 61.628 55.000 0.00 0.00 38.93 3.18
651 1461 8.669243 GGAGAACATCTCAAACCATAACTAAAG 58.331 37.037 9.40 0.00 45.12 1.85
681 1491 6.773976 TGGGGCAGATGTTTCTAAATTAAG 57.226 37.500 0.00 0.00 0.00 1.85
763 1573 4.693566 CCGGCAGAGTTGTAAGACATTAAA 59.306 41.667 0.00 0.00 0.00 1.52
767 1577 1.066143 CCCGGCAGAGTTGTAAGACAT 60.066 52.381 0.00 0.00 0.00 3.06
960 1774 6.053005 TCCGAGAAACAATCACAAAAGTAGT 58.947 36.000 0.00 0.00 0.00 2.73
969 1783 5.064071 GGAAGAGATTCCGAGAAACAATCAC 59.936 44.000 0.00 0.00 0.00 3.06
994 1808 1.006102 CTCCCGTGATCATACCCGC 60.006 63.158 0.00 0.00 0.00 6.13
996 1810 0.034059 CAGCTCCCGTGATCATACCC 59.966 60.000 0.00 0.00 0.00 3.69
1107 1921 0.475475 TGACCCCCATCATGAGCATC 59.525 55.000 0.09 0.00 0.00 3.91
1205 2019 1.941325 CGCAGTTTCAGGGTAGATCC 58.059 55.000 0.00 0.00 0.00 3.36
1211 2025 2.920076 TTTGGGCGCAGTTTCAGGGT 62.920 55.000 10.83 0.00 0.00 4.34
1212 2026 1.743321 TTTTGGGCGCAGTTTCAGGG 61.743 55.000 10.83 0.00 0.00 4.45
1227 2041 6.530019 ACAAGCTAGATGGGGTAAATTTTG 57.470 37.500 0.00 0.00 0.00 2.44
1259 2074 4.589216 TCAAGTTTGGAAAGCATTCTGG 57.411 40.909 1.19 0.00 35.79 3.86
1308 2123 3.843422 TCCATGTTTCAACACCCTTCAT 58.157 40.909 0.00 0.00 42.51 2.57
1337 2152 8.280807 AGAAGTAGTACCCTTATTAGTAGTGCT 58.719 37.037 0.00 0.00 36.70 4.40
1344 2159 8.354426 GCTGAAGAGAAGTAGTACCCTTATTAG 58.646 40.741 0.00 0.00 0.00 1.73
1451 2267 2.354704 CCGCCTCCTGAAATGTTACAGA 60.355 50.000 0.00 0.00 36.38 3.41
1454 2270 0.733150 GCCGCCTCCTGAAATGTTAC 59.267 55.000 0.00 0.00 0.00 2.50
1611 2430 3.644335 GGGGGTCTTGTCTCTACTATGT 58.356 50.000 0.00 0.00 0.00 2.29
1721 2574 8.748412 CCAGTAAATGTTCTTCCAAATGGATAA 58.252 33.333 2.38 0.00 44.98 1.75
1850 2704 6.347725 GGTGACATGTCTAAGTAAAGCAACAG 60.348 42.308 25.55 0.00 0.00 3.16
1907 2761 1.945387 CAGAGCACAATACTGCGGAT 58.055 50.000 0.00 0.00 42.42 4.18
1914 2768 5.819901 AGATAGGAAAAGCAGAGCACAATAC 59.180 40.000 0.00 0.00 0.00 1.89
1946 2800 5.709164 GCGTGGGGTATCTTCTAGTATTCTA 59.291 44.000 0.00 0.00 0.00 2.10
1953 2807 1.030457 ACGCGTGGGGTATCTTCTAG 58.970 55.000 12.93 0.00 0.00 2.43
1981 2835 9.467258 CATATCACACAAAATCAGACAAAAGTT 57.533 29.630 0.00 0.00 0.00 2.66
1990 2844 5.571784 ACCAGCATATCACACAAAATCAG 57.428 39.130 0.00 0.00 0.00 2.90
1991 2845 6.602803 ACATACCAGCATATCACACAAAATCA 59.397 34.615 0.00 0.00 0.00 2.57
2074 2929 2.566833 TTGCAATGCTGTAGGTGTCT 57.433 45.000 6.82 0.00 0.00 3.41
2083 2938 6.090358 CACTTCCTTTTAGATTTGCAATGCTG 59.910 38.462 6.82 0.00 0.00 4.41
2088 2943 6.916360 ATCCACTTCCTTTTAGATTTGCAA 57.084 33.333 0.00 0.00 0.00 4.08
2222 3106 4.508461 TGGGTACACCGAATATATCACG 57.492 45.455 0.00 5.62 44.64 4.35
2243 3127 4.456911 GGAAATCATGATGACGCCATACAT 59.543 41.667 9.46 0.00 32.09 2.29
2250 3134 3.562973 AGTGATGGAAATCATGATGACGC 59.437 43.478 9.46 4.60 35.97 5.19
2269 3153 8.485976 TTTATTGGGTTTTCTGTTTTTCAGTG 57.514 30.769 0.00 0.00 43.97 3.66
2286 3170 1.588674 TAGGCGCACGATTTATTGGG 58.411 50.000 10.83 0.00 0.00 4.12
2297 3181 5.926542 TCACTCATCTTAATTATAGGCGCAC 59.073 40.000 10.83 0.00 0.00 5.34
2317 3201 1.711375 TCCTCTGTACTGTCCCTCACT 59.289 52.381 0.00 0.00 0.00 3.41
2324 3208 0.533032 GGTGGCTCCTCTGTACTGTC 59.467 60.000 0.00 0.00 0.00 3.51
2331 3215 1.139853 GGTATCTTGGTGGCTCCTCTG 59.860 57.143 7.19 0.00 37.07 3.35
2338 3222 1.312815 GCATCAGGTATCTTGGTGGC 58.687 55.000 0.00 0.00 0.00 5.01
2372 3256 8.739972 GTCTGAATGGACACATAAGGTATTTTT 58.260 33.333 0.00 0.00 35.94 1.94
2382 3266 1.552792 TGGCGTCTGAATGGACACATA 59.447 47.619 0.00 0.00 35.94 2.29
2386 3270 1.003003 TCAATGGCGTCTGAATGGACA 59.997 47.619 0.00 0.00 36.12 4.02
2399 3283 1.340889 TGTGCAGACCTTTTCAATGGC 59.659 47.619 0.00 0.00 0.00 4.40
2403 3287 4.796946 GCATCATTGTGCAGACCTTTTCAA 60.797 41.667 0.00 0.00 44.43 2.69
2409 3293 1.028330 CCGCATCATTGTGCAGACCT 61.028 55.000 10.41 0.00 45.30 3.85
2461 3345 1.076727 TGGAGAGGTCGAGGCAGAA 59.923 57.895 0.00 0.00 0.00 3.02
2504 3388 2.427245 TACGTGTTGGCGACGTCG 60.427 61.111 32.57 32.57 46.85 5.12
2518 3402 3.657656 CTCGAACTTGAGTACGAGTACG 58.342 50.000 0.00 0.00 44.37 3.67
2540 3424 0.332632 TTAAAGGCTGGGATGCTGCT 59.667 50.000 0.00 0.00 0.00 4.24
2555 3439 4.575236 TGTTAACGTGTGATGGCTGTTAAA 59.425 37.500 0.26 0.00 36.93 1.52
2567 3451 5.651530 AGTAGGATGATCTGTTAACGTGTG 58.348 41.667 0.26 0.00 0.00 3.82
2576 3460 4.551671 AGTGCCTAAGTAGGATGATCTGT 58.448 43.478 8.64 0.00 46.63 3.41
2578 3462 6.377912 AGTAAGTGCCTAAGTAGGATGATCT 58.622 40.000 8.64 0.00 46.63 2.75
2579 3463 6.658188 AGTAAGTGCCTAAGTAGGATGATC 57.342 41.667 8.64 0.00 46.63 2.92
2580 3464 8.174085 AGATAGTAAGTGCCTAAGTAGGATGAT 58.826 37.037 8.64 0.00 46.63 2.45
2599 3568 6.495872 AGACGGGGCATAATTGTTAGATAGTA 59.504 38.462 0.00 0.00 0.00 1.82
2710 3679 3.965539 ATGCGTGTGAGCTCCCTGC 62.966 63.158 12.15 10.60 43.29 4.85
2711 3680 2.104859 CATGCGTGTGAGCTCCCTG 61.105 63.158 12.15 0.00 38.13 4.45
2773 4264 1.913951 AAGCCGCATCCATCACTCCA 61.914 55.000 0.00 0.00 0.00 3.86
2817 4308 1.522355 CAGCCCATGCAGGTACGAG 60.522 63.158 0.00 0.00 41.13 4.18
2821 4312 2.591753 GCTCAGCCCATGCAGGTA 59.408 61.111 0.00 0.00 41.13 3.08
2867 4358 2.741759 TTGATTCTAGCAGTGCGTCA 57.258 45.000 10.00 7.67 0.00 4.35
2872 4363 6.018098 GGTCTTGATCATTGATTCTAGCAGTG 60.018 42.308 0.00 0.00 0.00 3.66
2873 4364 6.054295 GGTCTTGATCATTGATTCTAGCAGT 58.946 40.000 0.00 0.00 0.00 4.40
2885 4376 4.834496 TGCTTTTCCTTGGTCTTGATCATT 59.166 37.500 0.00 0.00 0.00 2.57
2891 4382 1.615392 CCCTGCTTTTCCTTGGTCTTG 59.385 52.381 0.00 0.00 0.00 3.02
2923 4414 5.598416 TCTTCAAGTGTTCTGTCTTCTCA 57.402 39.130 0.00 0.00 0.00 3.27
2973 4464 1.651240 CCTCCCGCATGCAACTTCTG 61.651 60.000 19.57 0.00 0.00 3.02
2980 4471 1.228706 TTTTTCCCTCCCGCATGCA 60.229 52.632 19.57 0.00 0.00 3.96
2982 4473 1.948721 GCCTTTTTCCCTCCCGCATG 61.949 60.000 0.00 0.00 0.00 4.06
2985 4476 2.282887 TGCCTTTTTCCCTCCCGC 60.283 61.111 0.00 0.00 0.00 6.13
3003 4494 4.052518 AGTGGTCCATGGGCCAGC 62.053 66.667 38.57 29.37 35.14 4.85
3008 4499 1.820906 CATGCGAGTGGTCCATGGG 60.821 63.158 13.02 0.00 34.26 4.00
3021 4512 2.607668 TAACTCCGACGAGGCATGCG 62.608 60.000 12.44 0.00 40.77 4.73
3110 4601 8.693625 TGCCACATCATCATTTTCATGTTAATA 58.306 29.630 0.00 0.00 0.00 0.98
3116 4607 4.565166 GTGTGCCACATCATCATTTTCATG 59.435 41.667 0.00 0.00 34.08 3.07
3148 4639 1.945394 CTTGACATGCAGCCTATCCAC 59.055 52.381 0.00 0.00 0.00 4.02
3168 4659 5.236047 GTCCACATCAGCTATGTCATTTCTC 59.764 44.000 6.01 0.00 46.15 2.87
3169 4660 5.121811 GTCCACATCAGCTATGTCATTTCT 58.878 41.667 6.01 0.00 46.15 2.52
3170 4661 4.877823 TGTCCACATCAGCTATGTCATTTC 59.122 41.667 6.01 0.00 46.15 2.17
3171 4662 4.847198 TGTCCACATCAGCTATGTCATTT 58.153 39.130 6.01 0.00 46.15 2.32
3172 4663 4.080695 ACTGTCCACATCAGCTATGTCATT 60.081 41.667 6.01 0.00 46.15 2.57
3173 4664 3.453717 ACTGTCCACATCAGCTATGTCAT 59.546 43.478 6.01 0.00 46.15 3.06
3174 4665 2.833943 ACTGTCCACATCAGCTATGTCA 59.166 45.455 6.01 2.69 46.15 3.58
3175 4666 3.193263 CACTGTCCACATCAGCTATGTC 58.807 50.000 6.01 0.00 46.15 3.06
3177 4668 2.934553 CACACTGTCCACATCAGCTATG 59.065 50.000 0.00 0.00 41.74 2.23
3178 4669 2.679059 GCACACTGTCCACATCAGCTAT 60.679 50.000 0.00 0.00 36.50 2.97
3179 4670 1.338105 GCACACTGTCCACATCAGCTA 60.338 52.381 0.00 0.00 36.50 3.32
3180 4671 0.604780 GCACACTGTCCACATCAGCT 60.605 55.000 0.00 0.00 36.50 4.24
3181 4672 0.886043 TGCACACTGTCCACATCAGC 60.886 55.000 0.00 0.00 36.50 4.26
3182 4673 1.817357 ATGCACACTGTCCACATCAG 58.183 50.000 0.00 0.00 38.68 2.90
3183 4674 3.415457 TTATGCACACTGTCCACATCA 57.585 42.857 0.00 0.00 0.00 3.07
3184 4675 3.940852 TCATTATGCACACTGTCCACATC 59.059 43.478 0.00 0.00 0.00 3.06
3185 4676 3.943381 CTCATTATGCACACTGTCCACAT 59.057 43.478 0.00 0.00 0.00 3.21
3186 4677 3.007831 TCTCATTATGCACACTGTCCACA 59.992 43.478 0.00 0.00 0.00 4.17
3187 4678 3.599343 TCTCATTATGCACACTGTCCAC 58.401 45.455 0.00 0.00 0.00 4.02
3188 4679 3.515104 TCTCTCATTATGCACACTGTCCA 59.485 43.478 0.00 0.00 0.00 4.02
3189 4680 4.128925 TCTCTCATTATGCACACTGTCC 57.871 45.455 0.00 0.00 0.00 4.02
3190 4681 6.423302 CCTATTCTCTCATTATGCACACTGTC 59.577 42.308 0.00 0.00 0.00 3.51
3191 4682 6.286758 CCTATTCTCTCATTATGCACACTGT 58.713 40.000 0.00 0.00 0.00 3.55
3192 4683 5.699915 CCCTATTCTCTCATTATGCACACTG 59.300 44.000 0.00 0.00 0.00 3.66
3193 4684 5.604231 TCCCTATTCTCTCATTATGCACACT 59.396 40.000 0.00 0.00 0.00 3.55
3194 4685 5.858381 TCCCTATTCTCTCATTATGCACAC 58.142 41.667 0.00 0.00 0.00 3.82
3195 4686 5.604231 ACTCCCTATTCTCTCATTATGCACA 59.396 40.000 0.00 0.00 0.00 4.57
3196 4687 6.107901 ACTCCCTATTCTCTCATTATGCAC 57.892 41.667 0.00 0.00 0.00 4.57
3197 4688 7.013220 ACTACTCCCTATTCTCTCATTATGCA 58.987 38.462 0.00 0.00 0.00 3.96
3198 4689 7.475137 ACTACTCCCTATTCTCTCATTATGC 57.525 40.000 0.00 0.00 0.00 3.14
3199 4690 9.184523 CCTACTACTCCCTATTCTCTCATTATG 57.815 40.741 0.00 0.00 0.00 1.90
3200 4691 8.340757 CCCTACTACTCCCTATTCTCTCATTAT 58.659 40.741 0.00 0.00 0.00 1.28
3201 4692 7.520058 TCCCTACTACTCCCTATTCTCTCATTA 59.480 40.741 0.00 0.00 0.00 1.90
3202 4693 6.335850 TCCCTACTACTCCCTATTCTCTCATT 59.664 42.308 0.00 0.00 0.00 2.57
3203 4694 5.858408 TCCCTACTACTCCCTATTCTCTCAT 59.142 44.000 0.00 0.00 0.00 2.90
3204 4695 5.233143 TCCCTACTACTCCCTATTCTCTCA 58.767 45.833 0.00 0.00 0.00 3.27
3205 4696 5.805424 GCTCCCTACTACTCCCTATTCTCTC 60.805 52.000 0.00 0.00 0.00 3.20
3206 4697 4.043686 GCTCCCTACTACTCCCTATTCTCT 59.956 50.000 0.00 0.00 0.00 3.10
3207 4698 4.202588 TGCTCCCTACTACTCCCTATTCTC 60.203 50.000 0.00 0.00 0.00 2.87
3208 4699 3.727923 TGCTCCCTACTACTCCCTATTCT 59.272 47.826 0.00 0.00 0.00 2.40
3209 4700 4.115398 TGCTCCCTACTACTCCCTATTC 57.885 50.000 0.00 0.00 0.00 1.75
3210 4701 4.078513 AGTTGCTCCCTACTACTCCCTATT 60.079 45.833 0.00 0.00 0.00 1.73
3211 4702 3.467863 AGTTGCTCCCTACTACTCCCTAT 59.532 47.826 0.00 0.00 0.00 2.57
3212 4703 2.857498 AGTTGCTCCCTACTACTCCCTA 59.143 50.000 0.00 0.00 0.00 3.53
3213 4704 1.646977 AGTTGCTCCCTACTACTCCCT 59.353 52.381 0.00 0.00 0.00 4.20
3214 4705 2.162264 AGTTGCTCCCTACTACTCCC 57.838 55.000 0.00 0.00 0.00 4.30
3215 4706 3.367321 AGAAGTTGCTCCCTACTACTCC 58.633 50.000 0.00 0.00 0.00 3.85
3216 4707 6.377712 TCTTAAGAAGTTGCTCCCTACTACTC 59.622 42.308 1.68 0.00 0.00 2.59
3217 4708 6.254522 TCTTAAGAAGTTGCTCCCTACTACT 58.745 40.000 1.68 0.00 0.00 2.57
3218 4709 6.527057 TCTTAAGAAGTTGCTCCCTACTAC 57.473 41.667 1.68 0.00 0.00 2.73
3219 4710 7.310485 CCTTTCTTAAGAAGTTGCTCCCTACTA 60.310 40.741 17.05 0.00 35.21 1.82
3220 4711 6.435292 TTTCTTAAGAAGTTGCTCCCTACT 57.565 37.500 17.05 0.00 35.21 2.57
3221 4712 5.644206 CCTTTCTTAAGAAGTTGCTCCCTAC 59.356 44.000 17.05 0.00 35.21 3.18
3222 4713 5.309806 ACCTTTCTTAAGAAGTTGCTCCCTA 59.690 40.000 17.05 0.00 35.21 3.53
3223 4714 4.104897 ACCTTTCTTAAGAAGTTGCTCCCT 59.895 41.667 17.05 0.00 35.21 4.20
3224 4715 4.399219 ACCTTTCTTAAGAAGTTGCTCCC 58.601 43.478 17.05 0.00 35.21 4.30
3225 4716 6.465084 TCTACCTTTCTTAAGAAGTTGCTCC 58.535 40.000 17.05 0.00 35.21 4.70
3226 4717 7.819900 TCATCTACCTTTCTTAAGAAGTTGCTC 59.180 37.037 17.05 0.00 35.21 4.26
3227 4718 7.680730 TCATCTACCTTTCTTAAGAAGTTGCT 58.319 34.615 17.05 4.32 35.21 3.91
3228 4719 7.604545 ACTCATCTACCTTTCTTAAGAAGTTGC 59.395 37.037 17.05 0.00 35.21 4.17
3232 4723 9.308318 GCTTACTCATCTACCTTTCTTAAGAAG 57.692 37.037 17.05 9.96 35.21 2.85
3233 4724 8.812972 TGCTTACTCATCTACCTTTCTTAAGAA 58.187 33.333 13.99 13.99 32.92 2.52
3234 4725 8.362464 TGCTTACTCATCTACCTTTCTTAAGA 57.638 34.615 0.00 0.00 32.92 2.10
3235 4726 8.874816 GTTGCTTACTCATCTACCTTTCTTAAG 58.125 37.037 0.00 0.00 0.00 1.85
3236 4727 7.822822 GGTTGCTTACTCATCTACCTTTCTTAA 59.177 37.037 0.00 0.00 0.00 1.85
3237 4728 7.180408 AGGTTGCTTACTCATCTACCTTTCTTA 59.820 37.037 0.00 0.00 33.35 2.10
3238 4729 6.013293 AGGTTGCTTACTCATCTACCTTTCTT 60.013 38.462 0.00 0.00 33.35 2.52
3239 4730 5.485708 AGGTTGCTTACTCATCTACCTTTCT 59.514 40.000 0.00 0.00 33.35 2.52
3240 4731 5.735766 AGGTTGCTTACTCATCTACCTTTC 58.264 41.667 0.00 0.00 33.35 2.62
3241 4732 5.763876 AGGTTGCTTACTCATCTACCTTT 57.236 39.130 0.00 0.00 33.35 3.11
3242 4733 5.763876 AAGGTTGCTTACTCATCTACCTT 57.236 39.130 0.00 0.00 39.74 3.50
3243 4734 6.869206 TTAAGGTTGCTTACTCATCTACCT 57.131 37.500 0.00 0.00 37.51 3.08
3244 4735 7.439655 CAGATTAAGGTTGCTTACTCATCTACC 59.560 40.741 0.00 0.00 0.00 3.18
3245 4736 7.042389 GCAGATTAAGGTTGCTTACTCATCTAC 60.042 40.741 0.00 0.00 35.05 2.59
3246 4737 6.986817 GCAGATTAAGGTTGCTTACTCATCTA 59.013 38.462 0.00 0.00 35.05 1.98
3247 4738 5.819901 GCAGATTAAGGTTGCTTACTCATCT 59.180 40.000 0.00 0.00 35.05 2.90
3248 4739 5.586243 TGCAGATTAAGGTTGCTTACTCATC 59.414 40.000 9.22 0.00 38.60 2.92
3249 4740 5.500234 TGCAGATTAAGGTTGCTTACTCAT 58.500 37.500 9.22 0.00 38.60 2.90
3258 4750 4.806640 ACCCATTTGCAGATTAAGGTTG 57.193 40.909 0.00 0.00 0.00 3.77
3290 4782 3.653344 TCGGTCTCTCACAACATTTCTG 58.347 45.455 0.00 0.00 0.00 3.02
3291 4783 4.248859 CATCGGTCTCTCACAACATTTCT 58.751 43.478 0.00 0.00 0.00 2.52
3342 4840 5.163764 TGTTTATGCACTTGATTCTAAGCCG 60.164 40.000 0.00 0.00 0.00 5.52
3427 4927 5.991328 ATCTATCAATTGTAACTGTGCGG 57.009 39.130 5.13 0.00 0.00 5.69
3428 4928 7.688372 AGAAATCTATCAATTGTAACTGTGCG 58.312 34.615 5.13 0.00 0.00 5.34
3477 4977 8.906238 ACTTCTACCCTTTACTATTTCCAGTA 57.094 34.615 0.00 0.00 0.00 2.74
3479 4979 8.080363 AGACTTCTACCCTTTACTATTTCCAG 57.920 38.462 0.00 0.00 0.00 3.86
3509 5009 2.808543 CCACTGACAAACTGAGGCTAAC 59.191 50.000 0.00 0.00 0.00 2.34
3520 5020 4.133820 CCATGTTACACTCCACTGACAAA 58.866 43.478 0.00 0.00 0.00 2.83
3521 5021 3.738982 CCATGTTACACTCCACTGACAA 58.261 45.455 0.00 0.00 0.00 3.18
3536 5036 6.778834 TGATGTTGATGAATAAGCCATGTT 57.221 33.333 0.00 0.00 0.00 2.71
3564 5064 5.589855 GGTAGAGACTGAGAAGGTTACTACC 59.410 48.000 0.00 0.00 45.39 3.18
3660 5160 3.269538 TGTGTTTCCATATACACGGGG 57.730 47.619 0.00 0.00 45.84 5.73
3661 5161 3.064820 GCTTGTGTTTCCATATACACGGG 59.935 47.826 0.00 0.00 45.84 5.28
3688 5188 8.861033 TCTCAAGATTGCATGCATTTAATTAC 57.139 30.769 23.37 4.96 0.00 1.89
3705 5205 8.358582 ACAAATAGCCTTTTCATTCTCAAGAT 57.641 30.769 0.00 0.00 0.00 2.40
3706 5206 7.667219 AGACAAATAGCCTTTTCATTCTCAAGA 59.333 33.333 0.00 0.00 0.00 3.02
3715 5215 6.463995 AAACACAGACAAATAGCCTTTTCA 57.536 33.333 0.00 0.00 0.00 2.69
3727 5227 4.702612 TGCCACTTCTTTAAACACAGACAA 59.297 37.500 0.00 0.00 0.00 3.18
3733 5233 7.081976 ACGAAATATGCCACTTCTTTAAACAC 58.918 34.615 0.00 0.00 0.00 3.32
3739 5239 5.957842 TCAACGAAATATGCCACTTCTTT 57.042 34.783 0.00 0.00 0.00 2.52
3756 5256 9.712305 ATCCATACTATTCTCCTAATTTCAACG 57.288 33.333 0.00 0.00 0.00 4.10
3828 5328 5.934402 TCTAAGTGGTGAGATAGGGAAAC 57.066 43.478 0.00 0.00 0.00 2.78
3892 5392 4.955811 TTCCACAGCTCTCTTTCTAACA 57.044 40.909 0.00 0.00 0.00 2.41
4060 5560 7.498239 GGAAGTAGTATAAAACCCTTGGATGAC 59.502 40.741 0.00 0.00 0.00 3.06
4131 5632 6.688073 TGTTACTCAGAGAGGAGGAAAAAT 57.312 37.500 3.79 0.00 39.38 1.82
4132 5633 6.494666 TTGTTACTCAGAGAGGAGGAAAAA 57.505 37.500 3.79 0.00 39.38 1.94
4137 5638 7.595819 AATCTATTGTTACTCAGAGAGGAGG 57.404 40.000 3.79 0.00 39.27 4.30
4210 5713 7.195646 ACTATGCATTTTTGTGTGGATTATCG 58.804 34.615 3.54 0.00 0.00 2.92
4229 5732 5.937111 TCTAGGGTTCCCAATAAACTATGC 58.063 41.667 10.73 0.00 0.00 3.14
4238 5741 6.624021 ACATAGGTATTTCTAGGGTTCCCAAT 59.376 38.462 10.73 3.88 0.00 3.16
4266 5769 8.943002 CGTTATGATTTACCTGGAAAGTAACTT 58.057 33.333 0.00 0.00 29.63 2.66
4268 5771 7.065443 AGCGTTATGATTTACCTGGAAAGTAAC 59.935 37.037 0.00 7.24 29.63 2.50
4292 5795 7.219484 ACATAAGCCCAATTATAATGTCAGC 57.781 36.000 0.00 0.83 0.00 4.26
4302 5805 9.528489 AAGAAAGAAGTAACATAAGCCCAATTA 57.472 29.630 0.00 0.00 0.00 1.40
4304 5807 8.957466 GTAAGAAAGAAGTAACATAAGCCCAAT 58.043 33.333 0.00 0.00 0.00 3.16
4327 5830 6.296026 AGCAAGTTTCCACATAGTTCTGTAA 58.704 36.000 0.00 0.00 0.00 2.41
4362 5865 3.245122 CCTGGAGTAGGCTAAAAACCCAA 60.245 47.826 0.00 0.00 40.38 4.12
4371 5874 5.414533 GCTGAAAGTACCTGGAGTAGGCTA 61.415 50.000 0.00 0.00 43.76 3.93
4445 5954 8.548025 TCCTTGAACACTGGAATCATCTAATAA 58.452 33.333 0.00 0.00 0.00 1.40
4447 5956 6.962182 TCCTTGAACACTGGAATCATCTAAT 58.038 36.000 0.00 0.00 0.00 1.73
4458 5967 5.647589 CATGAAATCATCCTTGAACACTGG 58.352 41.667 0.00 0.00 34.96 4.00
4459 5968 5.100259 GCATGAAATCATCCTTGAACACTG 58.900 41.667 0.00 0.00 34.96 3.66
4474 5983 5.476599 TGCAGTTTAGTTAGTGGCATGAAAT 59.523 36.000 0.00 0.00 0.00 2.17
4673 6184 9.444600 TGATGATGGTAATATGATGAAGTGATG 57.555 33.333 0.00 0.00 0.00 3.07
4718 6229 6.107343 GCTTACTTACCCAGTAGGAAAGAAG 58.893 44.000 0.00 0.00 39.28 2.85
4733 6245 4.434520 GACACTGGGATCTGCTTACTTAC 58.565 47.826 0.00 0.00 0.00 2.34
4777 6289 0.250901 CCTGCACCAAACCTACTGCT 60.251 55.000 0.00 0.00 0.00 4.24
4801 6313 2.785269 TGCCCTTGATGATATCACCCTT 59.215 45.455 7.78 0.00 39.39 3.95
4831 6343 9.839185 AATACTAGATGGGATTTTAGGCTAGTA 57.161 33.333 0.00 0.00 41.43 1.82
4986 6499 9.793252 ACATGATTGAAGCAATAAGTTATTGAC 57.207 29.630 30.97 22.89 46.52 3.18
5113 6626 2.989909 TGTCCATCTCAATTGCATCGT 58.010 42.857 0.00 0.00 0.00 3.73
5207 6720 4.652421 TCAACTACACCCTTGTCAACTACT 59.348 41.667 0.00 0.00 37.15 2.57
5209 6722 4.406326 TGTCAACTACACCCTTGTCAACTA 59.594 41.667 0.00 0.00 37.15 2.24
5233 6746 1.003003 TGTCCTTGCCATGTTCATCGA 59.997 47.619 0.00 0.00 0.00 3.59
5264 6777 9.869844 GCATCGCTATGAATTACATAATTATCC 57.130 33.333 1.73 0.00 40.39 2.59
5271 6784 6.928492 TCAACTGCATCGCTATGAATTACATA 59.072 34.615 1.73 0.00 40.07 2.29
5310 6823 9.964303 GTGATACATTTGATAAACATTATGCCA 57.036 29.630 0.00 0.00 0.00 4.92
5328 6841 9.322773 CTGAGATGATGTAAACAAGTGATACAT 57.677 33.333 10.08 10.08 41.60 2.29
5330 6843 8.598924 CACTGAGATGATGTAAACAAGTGATAC 58.401 37.037 3.78 0.00 0.00 2.24
5332 6845 7.164122 ACACTGAGATGATGTAAACAAGTGAT 58.836 34.615 13.11 0.00 0.00 3.06
5334 6847 6.791887 ACACTGAGATGATGTAAACAAGTG 57.208 37.500 7.11 7.11 0.00 3.16
5335 6848 8.902540 TTAACACTGAGATGATGTAAACAAGT 57.097 30.769 0.00 0.00 0.00 3.16
5377 6890 4.669206 AAAATGACCACATGAGTTGCAA 57.331 36.364 0.00 0.00 36.79 4.08
5437 6954 4.802039 GCATGACTCCATAGCAAACATTTG 59.198 41.667 0.00 0.00 41.03 2.32
5446 6963 2.355010 AAAGGGCATGACTCCATAGC 57.645 50.000 0.00 0.00 0.00 2.97
5448 6965 5.450818 AAAGTAAAGGGCATGACTCCATA 57.549 39.130 0.00 0.00 0.00 2.74
5508 7025 4.335315 CACTTGAGACCTGCAACAGTTTAA 59.665 41.667 0.00 0.00 0.00 1.52
5511 7028 2.292267 CACTTGAGACCTGCAACAGTT 58.708 47.619 0.00 0.00 0.00 3.16
5533 7050 0.675083 TCATTGCAAAGGTGGCTGTG 59.325 50.000 1.71 0.00 0.00 3.66
5732 7253 1.410153 AGTTTCCTTGCAACAAGCTGG 59.590 47.619 0.00 0.00 45.94 4.85
5738 7259 5.221224 CCAGTTTATCAGTTTCCTTGCAACA 60.221 40.000 0.00 0.00 0.00 3.33
5765 7286 4.330250 AGATGATAAATGATGCCCTTCCG 58.670 43.478 0.00 0.00 0.00 4.30
5789 7310 7.283807 CCAATGAAGATCATGAAGGACAATACA 59.716 37.037 0.00 0.00 37.15 2.29
5835 7356 6.540551 GTGAAGGGATTCATAAGAGAGAAACC 59.459 42.308 0.00 0.00 36.34 3.27
5847 7368 4.387026 TGGTTGAAGTGAAGGGATTCAT 57.613 40.909 0.00 0.00 33.26 2.57
5862 7383 2.038426 ACGATGTGATGAGGTTGGTTGA 59.962 45.455 0.00 0.00 0.00 3.18
5869 7390 3.493350 GCCTTGATACGATGTGATGAGGT 60.493 47.826 0.00 0.00 0.00 3.85
5872 7393 2.433970 TGGCCTTGATACGATGTGATGA 59.566 45.455 3.32 0.00 0.00 2.92
5882 7403 5.596845 TCAAAGTTGTTTTGGCCTTGATAC 58.403 37.500 3.32 0.00 45.05 2.24
5889 7410 3.376546 TGCAATTCAAAGTTGTTTTGGCC 59.623 39.130 0.00 0.00 45.05 5.36
5947 7468 3.070076 CATGTACTCATGCCGCACT 57.930 52.632 0.00 0.00 43.66 4.40
5956 7477 5.434182 TGTCATGAAATCCCATGTACTCA 57.566 39.130 0.00 0.00 43.22 3.41
5974 7495 4.056092 TGCATCAAACTTGCAAATGTCA 57.944 36.364 0.00 1.43 46.48 3.58
6019 7540 6.209589 ACTGAACATACATCACACTAGTCACT 59.790 38.462 0.00 0.00 0.00 3.41
6021 7542 6.590234 ACTGAACATACATCACACTAGTCA 57.410 37.500 0.00 0.00 0.00 3.41
6040 7562 6.351711 CATCTATTCCATCCACTCAAACTGA 58.648 40.000 0.00 0.00 0.00 3.41
6069 7591 8.663209 TTGATCTTCCATCCCTTTGATTTAAA 57.337 30.769 0.00 0.00 0.00 1.52
6152 7676 5.819059 AGTAACTAAAGGACGATCGTCATC 58.181 41.667 39.98 27.51 46.20 2.92
6156 7680 6.344500 TCTCTAGTAACTAAAGGACGATCGT 58.656 40.000 22.97 22.97 0.00 3.73
6196 7720 2.679837 GACGATCAGCATGTTTGGATGT 59.320 45.455 0.00 0.00 37.40 3.06
6200 7755 1.742761 AGGACGATCAGCATGTTTGG 58.257 50.000 0.00 0.00 37.40 3.28
6209 7764 5.655488 AGTCAAGTATGAAAGGACGATCAG 58.345 41.667 0.00 0.00 37.30 2.90
6215 7770 7.379750 ACTCAGTTAGTCAAGTATGAAAGGAC 58.620 38.462 0.00 0.00 37.30 3.85
6246 7801 9.162764 GCCTTTTACATGTCATTCTTTAGTCTA 57.837 33.333 0.00 0.00 0.00 2.59
6283 7838 1.002888 CATGAAGGTGTCAGAGGCAGT 59.997 52.381 0.00 0.00 40.43 4.40
6291 7846 1.303561 GCCTGCCATGAAGGTGTCA 60.304 57.895 13.93 0.00 41.67 3.58
6417 7998 2.606065 GGATTTTACCGCGTTGCACTTT 60.606 45.455 4.92 0.00 0.00 2.66
6424 8005 2.482721 CTCTGTTGGATTTTACCGCGTT 59.517 45.455 4.92 0.00 0.00 4.84
6443 8029 3.371102 TTGTGCCTAGACGATATGCTC 57.629 47.619 0.00 0.00 0.00 4.26
6578 8165 6.588204 TGTGTATCCGCACCTTATAAAATCT 58.412 36.000 0.00 0.00 38.52 2.40
6587 8174 2.365617 CCTCTATGTGTATCCGCACCTT 59.634 50.000 0.00 0.00 38.52 3.50
6591 8178 4.149598 ACATACCTCTATGTGTATCCGCA 58.850 43.478 0.00 0.00 41.32 5.69
6613 8200 6.264970 TGAGTTTTCATGATTTGTGATGGACA 59.735 34.615 0.00 0.00 0.00 4.02
6647 8234 2.390427 GCCTAATGCACCGGTACAC 58.610 57.895 10.38 1.62 40.77 2.90
6672 8259 5.741982 GTGTTCGGGGATTATTTGATTTTCG 59.258 40.000 0.00 0.00 0.00 3.46
6712 8299 1.873591 CAAGAAACGAGGTGGGAGTTG 59.126 52.381 0.00 0.00 0.00 3.16
6748 8335 7.554118 TCACATCTCTTATTGGTTGATTCCTTC 59.446 37.037 0.00 0.00 0.00 3.46
6784 8371 5.799213 AGGTAGTCTCAAGTCATTGAAAGG 58.201 41.667 0.00 0.00 44.68 3.11
6814 8401 5.555966 TGTAATTAACTGACCACTGCATGA 58.444 37.500 0.00 0.00 0.00 3.07
6831 8418 7.149973 GCTGATCAATACCATTGCATGTAATT 58.850 34.615 6.26 0.00 0.00 1.40
6870 8457 4.227527 AGGTGAAGGGGAAAACGAGATAAT 59.772 41.667 0.00 0.00 0.00 1.28
6873 8460 1.985895 AGGTGAAGGGGAAAACGAGAT 59.014 47.619 0.00 0.00 0.00 2.75
6970 8563 9.862371 TCTATACTTCTCTTTCATTGAACTCAC 57.138 33.333 0.00 0.00 0.00 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.