Multiple sequence alignment - TraesCS3B01G587200

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G587200 chr3B 100.000 2705 0 0 359 3063 813901565 813904269 0.000000e+00 4996
1 TraesCS3B01G587200 chr3B 82.308 390 39 13 2456 2816 606379173 606379561 8.250000e-81 311
2 TraesCS3B01G587200 chr3B 90.055 181 17 1 1094 1273 812798882 812799062 1.840000e-57 233
3 TraesCS3B01G587200 chr3B 100.000 56 0 0 1 56 813901207 813901262 1.500000e-18 104
4 TraesCS3B01G587200 chr3A 89.005 2101 162 24 359 2426 737180155 737182219 0.000000e+00 2536
5 TraesCS3B01G587200 chr3A 80.813 959 169 11 1100 2047 735981864 735980910 0.000000e+00 737
6 TraesCS3B01G587200 chr3A 80.993 947 151 20 1126 2052 735976313 735975376 0.000000e+00 725
7 TraesCS3B01G587200 chr3A 79.932 294 38 13 2456 2730 20007209 20006918 2.410000e-46 196
8 TraesCS3B01G587200 chr3A 76.963 382 43 22 2462 2815 701358553 701358917 3.140000e-40 176
9 TraesCS3B01G587200 chrUn 82.265 1731 223 48 577 2265 46199494 46201182 0.000000e+00 1419
10 TraesCS3B01G587200 chrUn 82.375 1600 217 41 669 2245 46203138 46204695 0.000000e+00 1332
11 TraesCS3B01G587200 chr4D 84.197 753 119 0 1332 2084 484951859 484951107 0.000000e+00 732
12 TraesCS3B01G587200 chr4D 82.946 774 131 1 1332 2105 485043049 485042277 0.000000e+00 697
13 TraesCS3B01G587200 chr4D 82.946 774 131 1 1332 2105 485064992 485064220 0.000000e+00 697
14 TraesCS3B01G587200 chr4D 82.517 755 128 4 1326 2078 484927440 484926688 0.000000e+00 660
15 TraesCS3B01G587200 chr4B 82.772 772 132 1 1332 2103 618251521 618250751 0.000000e+00 688
16 TraesCS3B01G587200 chr4B 82.649 755 127 4 1326 2078 618227172 618226420 0.000000e+00 665
17 TraesCS3B01G587200 chr4B 80.603 232 45 0 1042 1273 618252169 618251938 2.430000e-41 180
18 TraesCS3B01G587200 chr4B 75.485 412 76 15 884 1273 618241685 618241277 8.730000e-41 178
19 TraesCS3B01G587200 chr3D 79.123 958 181 15 1100 2047 605027069 605026121 0.000000e+00 643
20 TraesCS3B01G587200 chr3D 81.865 386 48 10 2456 2821 58397917 58397534 3.840000e-79 305
21 TraesCS3B01G587200 chr3D 91.954 174 14 0 1100 1273 605034394 605034567 8.480000e-61 244
22 TraesCS3B01G587200 chr2B 84.636 371 41 8 2454 2816 67894441 67894079 3.760000e-94 355
23 TraesCS3B01G587200 chr2B 79.348 368 56 8 2456 2807 139806298 139806661 1.100000e-59 241
24 TraesCS3B01G587200 chr6A 83.206 393 33 12 2456 2816 592346688 592346297 2.280000e-86 329
25 TraesCS3B01G587200 chr2A 82.574 373 44 17 2458 2816 4948989 4949354 2.970000e-80 309
26 TraesCS3B01G587200 chr2A 81.720 372 52 10 2456 2816 550578796 550579162 2.310000e-76 296
27 TraesCS3B01G587200 chr2A 80.214 374 48 14 2456 2807 87446420 87446789 1.090000e-64 257
28 TraesCS3B01G587200 chr1D 81.163 361 51 12 2461 2812 409054550 409054198 1.080000e-69 274
29 TraesCS3B01G587200 chr2D 80.435 368 54 8 2456 2807 87248656 87249021 6.510000e-67 265
30 TraesCS3B01G587200 chr7D 77.273 396 57 16 2454 2820 530846746 530846355 5.180000e-48 202
31 TraesCS3B01G587200 chr5A 80.426 235 42 4 1042 1273 666117143 666116910 3.140000e-40 176
32 TraesCS3B01G587200 chr6B 76.131 398 54 19 2456 2816 712123441 712123834 1.460000e-38 171


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G587200 chr3B 813901207 813904269 3062 False 2550.0 4996 100.0000 1 3063 2 chr3B.!!$F3 3062
1 TraesCS3B01G587200 chr3A 737180155 737182219 2064 False 2536.0 2536 89.0050 359 2426 1 chr3A.!!$F2 2067
2 TraesCS3B01G587200 chr3A 735980910 735981864 954 True 737.0 737 80.8130 1100 2047 1 chr3A.!!$R3 947
3 TraesCS3B01G587200 chr3A 735975376 735976313 937 True 725.0 725 80.9930 1126 2052 1 chr3A.!!$R2 926
4 TraesCS3B01G587200 chrUn 46199494 46204695 5201 False 1375.5 1419 82.3200 577 2265 2 chrUn.!!$F1 1688
5 TraesCS3B01G587200 chr4D 484951107 484951859 752 True 732.0 732 84.1970 1332 2084 1 chr4D.!!$R2 752
6 TraesCS3B01G587200 chr4D 485042277 485043049 772 True 697.0 697 82.9460 1332 2105 1 chr4D.!!$R3 773
7 TraesCS3B01G587200 chr4D 485064220 485064992 772 True 697.0 697 82.9460 1332 2105 1 chr4D.!!$R4 773
8 TraesCS3B01G587200 chr4D 484926688 484927440 752 True 660.0 660 82.5170 1326 2078 1 chr4D.!!$R1 752
9 TraesCS3B01G587200 chr4B 618226420 618227172 752 True 665.0 665 82.6490 1326 2078 1 chr4B.!!$R1 752
10 TraesCS3B01G587200 chr4B 618250751 618252169 1418 True 434.0 688 81.6875 1042 2103 2 chr4B.!!$R3 1061
11 TraesCS3B01G587200 chr3D 605026121 605027069 948 True 643.0 643 79.1230 1100 2047 1 chr3D.!!$R2 947

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
508 509 0.331616 AAAACATAGAGCCGGCCCTT 59.668 50.0 26.15 11.84 0.0 3.95 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2486 6469 0.107643 AAACATTTTTGGTGGGCGGG 59.892 50.0 0.0 0.0 0.0 6.13 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
39 40 8.943909 TTTTTATTTGACATACGGGTTGTTTT 57.056 26.923 0.00 0.00 0.00 2.43
40 41 7.932120 TTTATTTGACATACGGGTTGTTTTG 57.068 32.000 0.00 0.00 0.00 2.44
41 42 3.357166 TTGACATACGGGTTGTTTTGC 57.643 42.857 0.00 0.00 0.00 3.68
42 43 2.577700 TGACATACGGGTTGTTTTGCT 58.422 42.857 0.00 0.00 0.00 3.91
43 44 2.292016 TGACATACGGGTTGTTTTGCTG 59.708 45.455 0.00 0.00 0.00 4.41
44 45 2.292292 GACATACGGGTTGTTTTGCTGT 59.708 45.455 0.00 0.00 0.00 4.40
45 46 3.478509 ACATACGGGTTGTTTTGCTGTA 58.521 40.909 0.00 0.00 0.00 2.74
46 47 3.500680 ACATACGGGTTGTTTTGCTGTAG 59.499 43.478 0.00 0.00 0.00 2.74
47 48 2.047002 ACGGGTTGTTTTGCTGTAGT 57.953 45.000 0.00 0.00 0.00 2.73
48 49 2.371306 ACGGGTTGTTTTGCTGTAGTT 58.629 42.857 0.00 0.00 0.00 2.24
49 50 2.756207 ACGGGTTGTTTTGCTGTAGTTT 59.244 40.909 0.00 0.00 0.00 2.66
50 51 3.946558 ACGGGTTGTTTTGCTGTAGTTTA 59.053 39.130 0.00 0.00 0.00 2.01
51 52 4.035909 ACGGGTTGTTTTGCTGTAGTTTAG 59.964 41.667 0.00 0.00 0.00 1.85
52 53 4.035909 CGGGTTGTTTTGCTGTAGTTTAGT 59.964 41.667 0.00 0.00 0.00 2.24
53 54 5.449451 CGGGTTGTTTTGCTGTAGTTTAGTT 60.449 40.000 0.00 0.00 0.00 2.24
54 55 6.334989 GGGTTGTTTTGCTGTAGTTTAGTTT 58.665 36.000 0.00 0.00 0.00 2.66
55 56 6.814644 GGGTTGTTTTGCTGTAGTTTAGTTTT 59.185 34.615 0.00 0.00 0.00 2.43
404 405 8.198778 TGGTTTGGAAATTAACTCTTTAACACC 58.801 33.333 0.00 0.00 29.77 4.16
416 417 7.787725 ACTCTTTAACACCTTACAAGTGAAG 57.212 36.000 0.00 0.00 38.63 3.02
428 429 8.833493 ACCTTACAAGTGAAGTTAAACACATAC 58.167 33.333 0.00 0.00 39.18 2.39
508 509 0.331616 AAAACATAGAGCCGGCCCTT 59.668 50.000 26.15 11.84 0.00 3.95
513 514 1.141053 CATAGAGCCGGCCCTTAGTTT 59.859 52.381 26.15 0.00 0.00 2.66
514 515 0.828677 TAGAGCCGGCCCTTAGTTTC 59.171 55.000 26.15 11.79 0.00 2.78
519 520 2.165301 CGGCCCTTAGTTTCGCGAG 61.165 63.158 9.59 0.00 0.00 5.03
559 581 0.877071 GTAGGCCCATCGATTGCATG 59.123 55.000 16.21 0.00 0.00 4.06
610 633 8.554490 ACTCTTCTTGTATATGGTCCTTACAT 57.446 34.615 0.00 0.00 0.00 2.29
694 720 0.397941 TTTCTCCTCCTGTGGTGCTG 59.602 55.000 0.00 0.00 0.00 4.41
717 747 4.970003 GCCGTGCAACATCAGAATATAAAC 59.030 41.667 0.00 0.00 35.74 2.01
740 770 6.034591 ACTGTGTAGACGAATCTAATTTCCG 58.965 40.000 0.00 0.00 39.20 4.30
744 774 4.367386 AGACGAATCTAATTTCCGACGT 57.633 40.909 0.00 0.00 31.46 4.34
761 791 3.102276 GACGTACAAAGCTCGATCTCTG 58.898 50.000 0.00 0.00 0.00 3.35
786 816 1.502163 GGCTGCGATGCTAAGCGATT 61.502 55.000 0.00 0.00 37.39 3.34
919 979 2.505407 TGCAATACAGCCATACACCTCT 59.495 45.455 0.00 0.00 0.00 3.69
920 980 3.134458 GCAATACAGCCATACACCTCTC 58.866 50.000 0.00 0.00 0.00 3.20
937 997 0.741221 CTCCAAACTCACGGCTAGCC 60.741 60.000 24.75 24.75 0.00 3.93
965 1030 2.838736 AGCCACACTTACTGAACACAG 58.161 47.619 0.00 0.00 37.63 3.66
966 1031 1.873591 GCCACACTTACTGAACACAGG 59.126 52.381 0.00 0.00 36.12 4.00
970 1035 3.804325 CACACTTACTGAACACAGGTCAG 59.196 47.826 10.33 10.33 36.12 3.51
975 1040 3.393089 ACTGAACACAGGTCAGCTAAG 57.607 47.619 11.72 0.00 36.12 2.18
977 1042 1.270839 TGAACACAGGTCAGCTAAGCC 60.271 52.381 0.00 0.00 0.00 4.35
1066 1137 4.168291 TGGTGCTGTGTGCCGTCA 62.168 61.111 0.00 0.00 42.00 4.35
1068 1139 2.260869 GGTGCTGTGTGCCGTCATT 61.261 57.895 0.00 0.00 42.00 2.57
1071 1142 0.534877 TGCTGTGTGCCGTCATTTCT 60.535 50.000 0.00 0.00 42.00 2.52
1307 1730 8.821686 AAATGTATTCCCACAATGTCATTCTA 57.178 30.769 0.00 0.00 30.84 2.10
1308 1731 7.807977 ATGTATTCCCACAATGTCATTCTAC 57.192 36.000 0.00 0.00 30.84 2.59
1310 1733 7.047891 TGTATTCCCACAATGTCATTCTACTC 58.952 38.462 0.00 0.00 0.00 2.59
1312 1735 5.698741 TCCCACAATGTCATTCTACTCAT 57.301 39.130 0.00 0.00 0.00 2.90
1313 1736 5.430886 TCCCACAATGTCATTCTACTCATG 58.569 41.667 0.00 0.00 0.00 3.07
1390 1830 2.029964 GACCCGCGTTTCACAGGA 59.970 61.111 4.92 0.00 0.00 3.86
1531 5508 0.036010 ACTTCACCTGGATCCAAGCG 60.036 55.000 17.00 3.67 0.00 4.68
1559 5536 2.815211 GCTTCGCTGATCACCGCA 60.815 61.111 5.52 0.00 0.00 5.69
1620 5597 0.599204 GTCGACCGCCTTGAGTTGAA 60.599 55.000 3.51 0.00 0.00 2.69
1622 5599 1.566018 CGACCGCCTTGAGTTGAACC 61.566 60.000 0.00 0.00 0.00 3.62
1636 5613 3.515502 AGTTGAACCTCGATGGAGAATCA 59.484 43.478 6.27 7.24 43.27 2.57
1637 5614 4.163078 AGTTGAACCTCGATGGAGAATCAT 59.837 41.667 6.27 0.00 43.27 2.45
1981 5958 2.593026 GTAGCCAGCTACATCTCCTCT 58.407 52.381 21.91 0.00 45.90 3.69
1987 5964 3.387374 CCAGCTACATCTCCTCTGACATT 59.613 47.826 0.00 0.00 0.00 2.71
2065 6045 1.169661 CCACCACCGCAAACTAAGCA 61.170 55.000 0.00 0.00 0.00 3.91
2081 6062 3.904136 AAGCAATTCCTCAAGACAACG 57.096 42.857 0.00 0.00 0.00 4.10
2086 6067 2.971660 TTCCTCAAGACAACGTCACA 57.028 45.000 0.00 0.00 34.60 3.58
2096 6077 4.049186 AGACAACGTCACACTGATGTAAC 58.951 43.478 0.00 0.00 45.14 2.50
2115 6096 2.889512 ACCGGCCTATACTGATGATGA 58.110 47.619 0.00 0.00 0.00 2.92
2117 6098 3.006967 ACCGGCCTATACTGATGATGAAC 59.993 47.826 0.00 0.00 0.00 3.18
2118 6099 3.006859 CCGGCCTATACTGATGATGAACA 59.993 47.826 0.00 0.00 0.00 3.18
2119 6100 4.323028 CCGGCCTATACTGATGATGAACAT 60.323 45.833 0.00 0.00 42.47 2.71
2120 6101 5.105351 CCGGCCTATACTGATGATGAACATA 60.105 44.000 0.00 0.00 39.56 2.29
2125 6106 6.155910 CCTATACTGATGATGAACATAGGCCT 59.844 42.308 11.78 11.78 39.56 5.19
2209 6190 5.449588 CGACCTTCCCATGAGAAATGAAATG 60.450 44.000 0.00 0.00 0.00 2.32
2235 6216 6.689554 TCTTTCATGCTGCAAATTGTAATGA 58.310 32.000 6.36 0.00 0.00 2.57
2236 6217 7.153315 TCTTTCATGCTGCAAATTGTAATGAA 58.847 30.769 6.36 6.69 0.00 2.57
2245 6226 5.927689 TGCAAATTGTAATGAAGCTTTCCTG 59.072 36.000 0.00 0.00 0.00 3.86
2248 6229 7.373493 CAAATTGTAATGAAGCTTTCCTGTCT 58.627 34.615 0.00 0.00 0.00 3.41
2259 6240 3.315191 GCTTTCCTGTCTGTGCAGTTTTA 59.685 43.478 0.00 0.00 34.84 1.52
2263 6244 6.463995 TTCCTGTCTGTGCAGTTTTATTTT 57.536 33.333 0.00 0.00 34.84 1.82
2264 6245 7.575414 TTCCTGTCTGTGCAGTTTTATTTTA 57.425 32.000 0.00 0.00 34.84 1.52
2265 6246 7.202016 TCCTGTCTGTGCAGTTTTATTTTAG 57.798 36.000 0.00 0.00 34.84 1.85
2267 6248 6.325919 TGTCTGTGCAGTTTTATTTTAGGG 57.674 37.500 0.00 0.00 0.00 3.53
2268 6249 5.830991 TGTCTGTGCAGTTTTATTTTAGGGT 59.169 36.000 0.00 0.00 0.00 4.34
2269 6250 6.016610 TGTCTGTGCAGTTTTATTTTAGGGTC 60.017 38.462 0.00 0.00 0.00 4.46
2270 6251 6.016610 GTCTGTGCAGTTTTATTTTAGGGTCA 60.017 38.462 0.00 0.00 0.00 4.02
2271 6252 6.719370 TCTGTGCAGTTTTATTTTAGGGTCAT 59.281 34.615 0.00 0.00 0.00 3.06
2272 6253 6.686630 TGTGCAGTTTTATTTTAGGGTCATG 58.313 36.000 0.00 0.00 0.00 3.07
2273 6254 5.576774 GTGCAGTTTTATTTTAGGGTCATGC 59.423 40.000 0.00 0.00 0.00 4.06
2275 6256 6.162777 GCAGTTTTATTTTAGGGTCATGCAA 58.837 36.000 0.00 0.00 0.00 4.08
2276 6257 6.818142 GCAGTTTTATTTTAGGGTCATGCAAT 59.182 34.615 0.00 0.00 0.00 3.56
2279 6260 7.818930 AGTTTTATTTTAGGGTCATGCAATGTG 59.181 33.333 0.00 0.00 46.80 3.21
2286 6267 4.824289 AGGGTCATGCAATGTGAAAATTC 58.176 39.130 0.00 0.00 46.80 2.17
2291 6272 4.989797 TCATGCAATGTGAAAATTCGCTTT 59.010 33.333 8.07 5.38 46.80 3.51
2300 6281 5.048991 TGTGAAAATTCGCTTTAGGTCTTCC 60.049 40.000 8.07 0.00 38.47 3.46
2306 6287 2.496470 TCGCTTTAGGTCTTCCTCTTCC 59.504 50.000 0.00 0.00 43.94 3.46
2363 6346 1.102154 AGAGTCTCCACAGAGCGATG 58.898 55.000 0.00 0.00 40.22 3.84
2368 6351 2.423892 GTCTCCACAGAGCGATGTAAGA 59.576 50.000 0.00 1.63 40.22 2.10
2370 6353 2.425312 CTCCACAGAGCGATGTAAGAGT 59.575 50.000 11.93 0.00 32.24 3.24
2371 6354 2.826128 TCCACAGAGCGATGTAAGAGTT 59.174 45.455 0.00 0.00 0.00 3.01
2407 6390 5.127682 AGCCAATCCCTGCTTAATTAACTTG 59.872 40.000 0.00 0.00 32.94 3.16
2448 6431 9.938280 AATATGTGTAGCAGTAAAGTGTAAAGA 57.062 29.630 0.00 0.00 0.00 2.52
2449 6432 7.891183 ATGTGTAGCAGTAAAGTGTAAAGAG 57.109 36.000 0.00 0.00 0.00 2.85
2450 6433 7.046292 TGTGTAGCAGTAAAGTGTAAAGAGA 57.954 36.000 0.00 0.00 0.00 3.10
2451 6434 7.494211 TGTGTAGCAGTAAAGTGTAAAGAGAA 58.506 34.615 0.00 0.00 0.00 2.87
2452 6435 8.148351 TGTGTAGCAGTAAAGTGTAAAGAGAAT 58.852 33.333 0.00 0.00 0.00 2.40
2453 6436 8.436200 GTGTAGCAGTAAAGTGTAAAGAGAATG 58.564 37.037 0.00 0.00 0.00 2.67
2454 6437 8.364894 TGTAGCAGTAAAGTGTAAAGAGAATGA 58.635 33.333 0.00 0.00 0.00 2.57
2455 6438 9.204570 GTAGCAGTAAAGTGTAAAGAGAATGAA 57.795 33.333 0.00 0.00 0.00 2.57
2456 6439 8.677148 AGCAGTAAAGTGTAAAGAGAATGAAA 57.323 30.769 0.00 0.00 0.00 2.69
2457 6440 9.120538 AGCAGTAAAGTGTAAAGAGAATGAAAA 57.879 29.630 0.00 0.00 0.00 2.29
2458 6441 9.899226 GCAGTAAAGTGTAAAGAGAATGAAAAT 57.101 29.630 0.00 0.00 0.00 1.82
2470 6453 8.992835 AAGAGAATGAAAATACAATTTGGCTC 57.007 30.769 0.78 0.00 0.00 4.70
2471 6454 8.358582 AGAGAATGAAAATACAATTTGGCTCT 57.641 30.769 0.78 0.00 0.00 4.09
2472 6455 8.810041 AGAGAATGAAAATACAATTTGGCTCTT 58.190 29.630 0.78 0.00 0.00 2.85
2473 6456 8.767478 AGAATGAAAATACAATTTGGCTCTTG 57.233 30.769 0.78 0.00 0.00 3.02
2474 6457 7.820872 AGAATGAAAATACAATTTGGCTCTTGG 59.179 33.333 0.78 0.00 0.00 3.61
2475 6458 5.792741 TGAAAATACAATTTGGCTCTTGGG 58.207 37.500 0.78 0.00 0.00 4.12
2476 6459 5.541868 TGAAAATACAATTTGGCTCTTGGGA 59.458 36.000 0.78 0.00 0.00 4.37
2477 6460 5.665916 AAATACAATTTGGCTCTTGGGAG 57.334 39.130 0.78 0.00 42.18 4.30
2494 6477 2.980233 GCATATGCTCCCGCCCAC 60.980 66.667 20.64 0.00 38.21 4.61
2495 6478 2.281761 CATATGCTCCCGCCCACC 60.282 66.667 0.00 0.00 34.43 4.61
2496 6479 2.772191 ATATGCTCCCGCCCACCA 60.772 61.111 0.00 0.00 34.43 4.17
2497 6480 2.382770 ATATGCTCCCGCCCACCAA 61.383 57.895 0.00 0.00 34.43 3.67
2498 6481 1.932156 ATATGCTCCCGCCCACCAAA 61.932 55.000 0.00 0.00 34.43 3.28
2499 6482 2.143575 TATGCTCCCGCCCACCAAAA 62.144 55.000 0.00 0.00 34.43 2.44
2500 6483 2.915137 GCTCCCGCCCACCAAAAA 60.915 61.111 0.00 0.00 0.00 1.94
2501 6484 2.282783 GCTCCCGCCCACCAAAAAT 61.283 57.895 0.00 0.00 0.00 1.82
2502 6485 1.591183 CTCCCGCCCACCAAAAATG 59.409 57.895 0.00 0.00 0.00 2.32
2503 6486 1.152440 TCCCGCCCACCAAAAATGT 60.152 52.632 0.00 0.00 0.00 2.71
2504 6487 0.760945 TCCCGCCCACCAAAAATGTT 60.761 50.000 0.00 0.00 0.00 2.71
2505 6488 0.107643 CCCGCCCACCAAAAATGTTT 59.892 50.000 0.00 0.00 0.00 2.83
2506 6489 1.475930 CCCGCCCACCAAAAATGTTTT 60.476 47.619 0.00 0.00 0.00 2.43
2507 6490 2.224305 CCCGCCCACCAAAAATGTTTTA 60.224 45.455 0.00 0.00 0.00 1.52
2508 6491 3.558109 CCCGCCCACCAAAAATGTTTTAT 60.558 43.478 0.00 0.00 0.00 1.40
2509 6492 4.068599 CCGCCCACCAAAAATGTTTTATT 58.931 39.130 0.00 0.00 0.00 1.40
2510 6493 4.083590 CCGCCCACCAAAAATGTTTTATTG 60.084 41.667 0.00 0.00 0.00 1.90
2511 6494 4.612486 CGCCCACCAAAAATGTTTTATTGC 60.612 41.667 0.00 0.00 0.00 3.56
2512 6495 4.276926 GCCCACCAAAAATGTTTTATTGCA 59.723 37.500 0.00 0.00 0.00 4.08
2513 6496 5.221126 GCCCACCAAAAATGTTTTATTGCAA 60.221 36.000 0.00 0.00 0.00 4.08
2514 6497 6.681368 GCCCACCAAAAATGTTTTATTGCAAA 60.681 34.615 1.71 0.00 0.00 3.68
2515 6498 7.432059 CCCACCAAAAATGTTTTATTGCAAAT 58.568 30.769 1.71 0.00 0.00 2.32
2516 6499 7.381678 CCCACCAAAAATGTTTTATTGCAAATG 59.618 33.333 1.71 0.00 0.00 2.32
2517 6500 7.919621 CCACCAAAAATGTTTTATTGCAAATGT 59.080 29.630 1.71 0.00 0.00 2.71
2518 6501 8.956014 CACCAAAAATGTTTTATTGCAAATGTC 58.044 29.630 1.71 0.00 0.00 3.06
2519 6502 8.680903 ACCAAAAATGTTTTATTGCAAATGTCA 58.319 25.926 1.71 0.07 0.00 3.58
2520 6503 9.512435 CCAAAAATGTTTTATTGCAAATGTCAA 57.488 25.926 1.71 0.00 0.00 3.18
2547 6530 8.801715 AAAAATAGATGTGTTCATTGTCACAC 57.198 30.769 15.29 13.80 45.26 3.82
2555 6538 6.645700 GTGTTCATTGTCACACAAAAATGT 57.354 33.333 13.59 0.00 41.96 2.71
2556 6539 7.059448 GTGTTCATTGTCACACAAAAATGTT 57.941 32.000 13.59 0.00 41.96 2.71
2557 6540 8.179148 GTGTTCATTGTCACACAAAAATGTTA 57.821 30.769 13.59 0.00 41.96 2.41
2558 6541 8.107564 GTGTTCATTGTCACACAAAAATGTTAC 58.892 33.333 13.59 0.00 41.96 2.50
2559 6542 7.276658 TGTTCATTGTCACACAAAAATGTTACC 59.723 33.333 0.00 0.00 41.96 2.85
2560 6543 7.106439 TCATTGTCACACAAAAATGTTACCT 57.894 32.000 0.00 0.00 41.96 3.08
2561 6544 6.977502 TCATTGTCACACAAAAATGTTACCTG 59.022 34.615 0.00 0.00 41.96 4.00
2562 6545 4.677584 TGTCACACAAAAATGTTACCTGC 58.322 39.130 0.00 0.00 0.00 4.85
2563 6546 4.158579 TGTCACACAAAAATGTTACCTGCA 59.841 37.500 0.00 0.00 0.00 4.41
2564 6547 5.105752 GTCACACAAAAATGTTACCTGCAA 58.894 37.500 0.00 0.00 0.00 4.08
2565 6548 5.578727 GTCACACAAAAATGTTACCTGCAAA 59.421 36.000 0.00 0.00 0.00 3.68
2566 6549 6.257630 GTCACACAAAAATGTTACCTGCAAAT 59.742 34.615 0.00 0.00 0.00 2.32
2567 6550 6.820656 TCACACAAAAATGTTACCTGCAAATT 59.179 30.769 0.00 0.00 0.00 1.82
2568 6551 7.335422 TCACACAAAAATGTTACCTGCAAATTT 59.665 29.630 0.00 0.00 0.00 1.82
2569 6552 7.967303 CACACAAAAATGTTACCTGCAAATTTT 59.033 29.630 0.00 0.00 33.13 1.82
2570 6553 8.518702 ACACAAAAATGTTACCTGCAAATTTTT 58.481 25.926 0.00 0.00 39.67 1.94
2571 6554 9.994432 CACAAAAATGTTACCTGCAAATTTTTA 57.006 25.926 0.00 0.00 37.99 1.52
2573 6556 9.662545 CAAAAATGTTACCTGCAAATTTTTAGG 57.337 29.630 13.47 13.47 37.99 2.69
2574 6557 9.620259 AAAAATGTTACCTGCAAATTTTTAGGA 57.380 25.926 19.44 5.49 38.18 2.94
2575 6558 8.831715 AAATGTTACCTGCAAATTTTTAGGAG 57.168 30.769 19.44 6.53 34.42 3.69
2576 6559 6.339587 TGTTACCTGCAAATTTTTAGGAGG 57.660 37.500 19.44 15.63 34.42 4.30
2577 6560 6.071984 TGTTACCTGCAAATTTTTAGGAGGA 58.928 36.000 17.84 3.29 34.42 3.71
2578 6561 6.551601 TGTTACCTGCAAATTTTTAGGAGGAA 59.448 34.615 17.84 7.87 34.42 3.36
2579 6562 7.070074 TGTTACCTGCAAATTTTTAGGAGGAAA 59.930 33.333 17.84 6.11 34.42 3.13
2580 6563 6.686484 ACCTGCAAATTTTTAGGAGGAAAT 57.314 33.333 17.84 0.00 34.42 2.17
2581 6564 6.701340 ACCTGCAAATTTTTAGGAGGAAATC 58.299 36.000 17.84 0.00 34.42 2.17
2582 6565 6.269769 ACCTGCAAATTTTTAGGAGGAAATCA 59.730 34.615 17.84 0.00 34.42 2.57
2583 6566 6.591448 CCTGCAAATTTTTAGGAGGAAATCAC 59.409 38.462 8.38 0.00 31.91 3.06
2584 6567 7.060383 TGCAAATTTTTAGGAGGAAATCACA 57.940 32.000 0.00 0.00 0.00 3.58
2585 6568 7.504403 TGCAAATTTTTAGGAGGAAATCACAA 58.496 30.769 0.00 0.00 0.00 3.33
2586 6569 7.656948 TGCAAATTTTTAGGAGGAAATCACAAG 59.343 33.333 0.00 0.00 0.00 3.16
2587 6570 7.657354 GCAAATTTTTAGGAGGAAATCACAAGT 59.343 33.333 0.00 0.00 0.00 3.16
2588 6571 8.981647 CAAATTTTTAGGAGGAAATCACAAGTG 58.018 33.333 0.00 0.00 0.00 3.16
2589 6572 7.839680 ATTTTTAGGAGGAAATCACAAGTGT 57.160 32.000 0.00 0.00 0.00 3.55
2590 6573 7.654022 TTTTTAGGAGGAAATCACAAGTGTT 57.346 32.000 0.00 0.00 0.00 3.32
2591 6574 7.654022 TTTTAGGAGGAAATCACAAGTGTTT 57.346 32.000 0.00 1.05 0.00 2.83
2592 6575 7.654022 TTTAGGAGGAAATCACAAGTGTTTT 57.346 32.000 8.53 8.53 35.79 2.43
2593 6576 5.520376 AGGAGGAAATCACAAGTGTTTTG 57.480 39.130 12.48 0.00 33.94 2.44
2594 6577 5.200483 AGGAGGAAATCACAAGTGTTTTGA 58.800 37.500 12.48 0.00 33.94 2.69
2595 6578 5.835280 AGGAGGAAATCACAAGTGTTTTGAT 59.165 36.000 12.48 3.13 33.94 2.57
2596 6579 6.015940 AGGAGGAAATCACAAGTGTTTTGATC 60.016 38.462 12.48 9.96 33.94 2.92
2597 6580 6.015940 GGAGGAAATCACAAGTGTTTTGATCT 60.016 38.462 12.48 8.08 33.94 2.75
2598 6581 6.742109 AGGAAATCACAAGTGTTTTGATCTG 58.258 36.000 12.48 0.00 33.94 2.90
2599 6582 6.322201 AGGAAATCACAAGTGTTTTGATCTGT 59.678 34.615 12.48 0.00 33.94 3.41
2600 6583 6.418819 GGAAATCACAAGTGTTTTGATCTGTG 59.581 38.462 12.48 0.00 33.94 3.66
2601 6584 4.291540 TCACAAGTGTTTTGATCTGTGC 57.708 40.909 0.00 0.00 0.00 4.57
2602 6585 3.693578 TCACAAGTGTTTTGATCTGTGCA 59.306 39.130 0.00 0.00 0.00 4.57
2603 6586 4.157472 TCACAAGTGTTTTGATCTGTGCAA 59.843 37.500 0.00 0.00 0.00 4.08
2604 6587 4.863689 CACAAGTGTTTTGATCTGTGCAAA 59.136 37.500 0.00 0.00 33.76 3.68
2605 6588 4.864247 ACAAGTGTTTTGATCTGTGCAAAC 59.136 37.500 0.00 0.00 35.20 2.93
2606 6589 4.717233 AGTGTTTTGATCTGTGCAAACA 57.283 36.364 0.00 0.00 35.20 2.83
2607 6590 5.070770 AGTGTTTTGATCTGTGCAAACAA 57.929 34.783 0.00 0.00 35.20 2.83
2608 6591 5.477510 AGTGTTTTGATCTGTGCAAACAAA 58.522 33.333 0.00 0.00 35.20 2.83
2609 6592 5.931146 AGTGTTTTGATCTGTGCAAACAAAA 59.069 32.000 0.00 0.00 37.85 2.44
2612 6595 6.406093 TTTTGATCTGTGCAAACAAAACAG 57.594 33.333 0.00 0.00 42.17 3.16
2613 6596 4.044336 TGATCTGTGCAAACAAAACAGG 57.956 40.909 0.00 0.00 41.34 4.00
2614 6597 3.446873 TGATCTGTGCAAACAAAACAGGT 59.553 39.130 0.00 0.00 41.34 4.00
2615 6598 3.951775 TCTGTGCAAACAAAACAGGTT 57.048 38.095 0.00 0.00 41.34 3.50
2616 6599 5.126222 TGATCTGTGCAAACAAAACAGGTTA 59.874 36.000 0.00 0.00 41.34 2.85
2617 6600 5.590530 TCTGTGCAAACAAAACAGGTTAT 57.409 34.783 0.00 0.00 41.34 1.89
2618 6601 5.971763 TCTGTGCAAACAAAACAGGTTATT 58.028 33.333 0.00 0.00 41.34 1.40
2619 6602 6.402222 TCTGTGCAAACAAAACAGGTTATTT 58.598 32.000 0.00 0.00 41.34 1.40
2620 6603 6.533367 TCTGTGCAAACAAAACAGGTTATTTC 59.467 34.615 0.00 0.00 41.34 2.17
2621 6604 5.582665 TGTGCAAACAAAACAGGTTATTTCC 59.417 36.000 0.00 0.00 0.00 3.13
2622 6605 5.582665 GTGCAAACAAAACAGGTTATTTCCA 59.417 36.000 0.00 0.00 0.00 3.53
2623 6606 6.092807 GTGCAAACAAAACAGGTTATTTCCAA 59.907 34.615 0.00 0.00 0.00 3.53
2624 6607 6.655003 TGCAAACAAAACAGGTTATTTCCAAA 59.345 30.769 0.00 0.00 0.00 3.28
2625 6608 7.337942 TGCAAACAAAACAGGTTATTTCCAAAT 59.662 29.630 0.00 0.00 0.00 2.32
2626 6609 7.643371 GCAAACAAAACAGGTTATTTCCAAATG 59.357 33.333 0.00 0.00 0.00 2.32
2627 6610 8.672815 CAAACAAAACAGGTTATTTCCAAATGT 58.327 29.630 0.00 0.00 0.00 2.71
2628 6611 8.800370 AACAAAACAGGTTATTTCCAAATGTT 57.200 26.923 0.00 0.00 0.00 2.71
2629 6612 9.892130 AACAAAACAGGTTATTTCCAAATGTTA 57.108 25.926 0.00 0.00 0.00 2.41
2630 6613 9.320352 ACAAAACAGGTTATTTCCAAATGTTAC 57.680 29.630 0.00 0.00 0.00 2.50
2631 6614 9.319143 CAAAACAGGTTATTTCCAAATGTTACA 57.681 29.630 0.00 0.00 0.00 2.41
2632 6615 8.880878 AAACAGGTTATTTCCAAATGTTACAC 57.119 30.769 0.00 0.00 0.00 2.90
2633 6616 7.833285 ACAGGTTATTTCCAAATGTTACACT 57.167 32.000 0.00 0.00 0.00 3.55
2634 6617 8.245195 ACAGGTTATTTCCAAATGTTACACTT 57.755 30.769 0.00 0.00 0.00 3.16
2635 6618 9.357161 ACAGGTTATTTCCAAATGTTACACTTA 57.643 29.630 0.00 0.00 0.00 2.24
2649 6632 9.980780 AATGTTACACTTATTTTGTTTTTGCAC 57.019 25.926 0.00 0.00 0.00 4.57
2650 6633 7.965045 TGTTACACTTATTTTGTTTTTGCACC 58.035 30.769 0.00 0.00 0.00 5.01
2651 6634 5.710613 ACACTTATTTTGTTTTTGCACCG 57.289 34.783 0.00 0.00 0.00 4.94
2652 6635 5.411781 ACACTTATTTTGTTTTTGCACCGA 58.588 33.333 0.00 0.00 0.00 4.69
2653 6636 5.289917 ACACTTATTTTGTTTTTGCACCGAC 59.710 36.000 0.00 0.00 0.00 4.79
2654 6637 4.501198 ACTTATTTTGTTTTTGCACCGACG 59.499 37.500 0.00 0.00 0.00 5.12
2655 6638 2.631418 TTTTGTTTTTGCACCGACGA 57.369 40.000 0.00 0.00 0.00 4.20
2656 6639 2.631418 TTTGTTTTTGCACCGACGAA 57.369 40.000 0.00 0.00 0.00 3.85
2657 6640 2.181426 TTGTTTTTGCACCGACGAAG 57.819 45.000 0.00 0.00 0.00 3.79
2658 6641 0.248296 TGTTTTTGCACCGACGAAGC 60.248 50.000 0.00 0.00 0.00 3.86
2659 6642 0.248296 GTTTTTGCACCGACGAAGCA 60.248 50.000 9.59 9.59 36.32 3.91
2660 6643 0.248296 TTTTTGCACCGACGAAGCAC 60.248 50.000 12.61 0.00 38.11 4.40
2661 6644 2.054140 TTTTGCACCGACGAAGCACC 62.054 55.000 12.61 0.00 38.11 5.01
2664 6647 2.660552 CACCGACGAAGCACCGTT 60.661 61.111 0.00 0.00 43.49 4.44
2665 6648 1.372004 CACCGACGAAGCACCGTTA 60.372 57.895 0.00 0.00 43.49 3.18
2666 6649 0.734942 CACCGACGAAGCACCGTTAT 60.735 55.000 0.00 0.00 43.49 1.89
2667 6650 0.810648 ACCGACGAAGCACCGTTATA 59.189 50.000 0.00 0.00 43.49 0.98
2668 6651 1.194495 CCGACGAAGCACCGTTATAC 58.806 55.000 0.00 0.00 43.49 1.47
2669 6652 1.194495 CGACGAAGCACCGTTATACC 58.806 55.000 4.94 0.00 43.49 2.73
2670 6653 1.194495 GACGAAGCACCGTTATACCG 58.806 55.000 4.94 0.00 43.49 4.02
2671 6654 0.527565 ACGAAGCACCGTTATACCGT 59.472 50.000 0.00 0.00 40.17 4.83
2672 6655 1.067635 ACGAAGCACCGTTATACCGTT 60.068 47.619 0.00 0.00 40.17 4.44
2673 6656 1.994779 CGAAGCACCGTTATACCGTTT 59.005 47.619 0.00 0.00 0.00 3.60
2674 6657 2.028404 CGAAGCACCGTTATACCGTTTC 59.972 50.000 0.00 0.00 0.00 2.78
2675 6658 1.632422 AGCACCGTTATACCGTTTCG 58.368 50.000 0.00 0.00 0.00 3.46
2676 6659 0.025384 GCACCGTTATACCGTTTCGC 59.975 55.000 0.00 0.00 0.00 4.70
2677 6660 1.348276 CACCGTTATACCGTTTCGCA 58.652 50.000 0.00 0.00 0.00 5.10
2678 6661 1.928503 CACCGTTATACCGTTTCGCAT 59.071 47.619 0.00 0.00 0.00 4.73
2679 6662 1.928503 ACCGTTATACCGTTTCGCATG 59.071 47.619 0.00 0.00 0.00 4.06
2680 6663 2.195096 CCGTTATACCGTTTCGCATGA 58.805 47.619 0.00 0.00 0.00 3.07
2681 6664 2.604011 CCGTTATACCGTTTCGCATGAA 59.396 45.455 0.00 0.00 0.00 2.57
2682 6665 3.062369 CCGTTATACCGTTTCGCATGAAA 59.938 43.478 0.00 0.00 41.69 2.69
2683 6666 4.435784 CCGTTATACCGTTTCGCATGAAAA 60.436 41.667 0.00 0.00 45.22 2.29
2684 6667 5.260140 CGTTATACCGTTTCGCATGAAAAT 58.740 37.500 0.00 0.00 45.22 1.82
2685 6668 5.735427 CGTTATACCGTTTCGCATGAAAATT 59.265 36.000 0.00 0.00 45.22 1.82
2686 6669 6.290334 CGTTATACCGTTTCGCATGAAAATTG 60.290 38.462 0.00 0.00 45.22 2.32
2687 6670 3.363341 ACCGTTTCGCATGAAAATTGT 57.637 38.095 0.00 0.00 45.22 2.71
2688 6671 3.049206 ACCGTTTCGCATGAAAATTGTG 58.951 40.909 0.00 0.00 45.22 3.33
2689 6672 3.243234 ACCGTTTCGCATGAAAATTGTGA 60.243 39.130 0.00 0.00 45.22 3.58
2690 6673 3.733224 CCGTTTCGCATGAAAATTGTGAA 59.267 39.130 0.00 0.00 45.22 3.18
2691 6674 4.143556 CCGTTTCGCATGAAAATTGTGAAG 60.144 41.667 0.00 0.00 45.22 3.02
2692 6675 4.661402 CGTTTCGCATGAAAATTGTGAAGC 60.661 41.667 0.00 4.42 45.22 3.86
2693 6676 3.639716 TCGCATGAAAATTGTGAAGCA 57.360 38.095 0.00 0.00 31.07 3.91
2694 6677 3.307674 TCGCATGAAAATTGTGAAGCAC 58.692 40.909 0.00 0.00 31.07 4.40
2695 6678 2.089427 CGCATGAAAATTGTGAAGCACG 59.911 45.455 0.00 0.00 37.14 5.34
2696 6679 2.159934 GCATGAAAATTGTGAAGCACGC 60.160 45.455 0.00 0.00 37.14 5.34
2697 6680 3.311106 CATGAAAATTGTGAAGCACGCT 58.689 40.909 0.00 0.00 37.14 5.07
2698 6681 3.435105 TGAAAATTGTGAAGCACGCTT 57.565 38.095 3.43 3.43 37.14 4.68
2699 6682 3.114809 TGAAAATTGTGAAGCACGCTTG 58.885 40.909 9.42 0.00 37.14 4.01
2700 6683 2.869233 AAATTGTGAAGCACGCTTGT 57.131 40.000 9.42 0.00 37.14 3.16
2701 6684 2.869233 AATTGTGAAGCACGCTTGTT 57.131 40.000 9.42 0.00 37.14 2.83
2702 6685 3.980646 AATTGTGAAGCACGCTTGTTA 57.019 38.095 9.42 0.00 37.14 2.41
2703 6686 2.748461 TTGTGAAGCACGCTTGTTAC 57.252 45.000 9.42 6.28 37.14 2.50
2704 6687 1.657822 TGTGAAGCACGCTTGTTACA 58.342 45.000 9.42 8.70 37.14 2.41
2705 6688 1.329292 TGTGAAGCACGCTTGTTACAC 59.671 47.619 9.42 11.09 37.14 2.90
2706 6689 1.597663 GTGAAGCACGCTTGTTACACT 59.402 47.619 9.42 0.00 36.26 3.55
2707 6690 2.798283 GTGAAGCACGCTTGTTACACTA 59.202 45.455 9.42 0.00 36.26 2.74
2708 6691 3.246699 GTGAAGCACGCTTGTTACACTAA 59.753 43.478 9.42 0.00 36.26 2.24
2709 6692 3.246699 TGAAGCACGCTTGTTACACTAAC 59.753 43.478 9.42 0.00 36.26 2.34
2710 6693 2.828877 AGCACGCTTGTTACACTAACA 58.171 42.857 0.00 0.00 46.13 2.41
2724 6707 9.602568 TGTTACACTAACAAGAACATCTACAAA 57.397 29.630 0.00 0.00 44.95 2.83
2784 6767 8.792830 TCTTGATTTTACTGTTCATTAGGGAG 57.207 34.615 0.00 0.00 0.00 4.30
2785 6768 7.336931 TCTTGATTTTACTGTTCATTAGGGAGC 59.663 37.037 0.00 0.00 0.00 4.70
2786 6769 6.480763 TGATTTTACTGTTCATTAGGGAGCA 58.519 36.000 0.00 0.00 0.00 4.26
2787 6770 7.118723 TGATTTTACTGTTCATTAGGGAGCAT 58.881 34.615 0.00 0.00 0.00 3.79
2788 6771 8.271458 TGATTTTACTGTTCATTAGGGAGCATA 58.729 33.333 0.00 0.00 0.00 3.14
2789 6772 9.289782 GATTTTACTGTTCATTAGGGAGCATAT 57.710 33.333 0.00 0.00 0.00 1.78
2790 6773 8.450578 TTTTACTGTTCATTAGGGAGCATATG 57.549 34.615 0.00 0.00 0.00 1.78
2791 6774 4.392940 ACTGTTCATTAGGGAGCATATGC 58.607 43.478 20.36 20.36 42.49 3.14
2792 6775 4.141413 ACTGTTCATTAGGGAGCATATGCA 60.141 41.667 28.62 8.05 45.16 3.96
2793 6776 4.136796 TGTTCATTAGGGAGCATATGCAC 58.863 43.478 28.62 22.27 45.16 4.57
2800 6783 2.758736 GGAGCATATGCACCCTAGAG 57.241 55.000 28.15 0.00 44.49 2.43
2801 6784 1.338579 GGAGCATATGCACCCTAGAGC 60.339 57.143 28.15 6.27 44.49 4.09
2802 6785 0.689623 AGCATATGCACCCTAGAGCC 59.310 55.000 28.62 0.00 45.16 4.70
2803 6786 0.397941 GCATATGCACCCTAGAGCCA 59.602 55.000 22.84 0.00 41.59 4.75
2804 6787 1.202806 GCATATGCACCCTAGAGCCAA 60.203 52.381 22.84 0.00 41.59 4.52
2805 6788 2.749466 GCATATGCACCCTAGAGCCAAA 60.749 50.000 22.84 0.00 41.59 3.28
2806 6789 3.554934 CATATGCACCCTAGAGCCAAAA 58.445 45.455 0.00 0.00 0.00 2.44
2807 6790 1.839424 ATGCACCCTAGAGCCAAAAC 58.161 50.000 0.00 0.00 0.00 2.43
2808 6791 0.605319 TGCACCCTAGAGCCAAAACG 60.605 55.000 0.00 0.00 0.00 3.60
2809 6792 1.305930 GCACCCTAGAGCCAAAACGG 61.306 60.000 0.00 0.00 38.11 4.44
2825 6808 3.320359 GGCCCTCCGGAAGATGAA 58.680 61.111 5.23 0.00 0.00 2.57
2826 6809 1.147153 GGCCCTCCGGAAGATGAAG 59.853 63.158 5.23 0.00 0.00 3.02
2827 6810 1.627297 GGCCCTCCGGAAGATGAAGT 61.627 60.000 5.23 0.00 0.00 3.01
2828 6811 1.120530 GCCCTCCGGAAGATGAAGTA 58.879 55.000 5.23 0.00 0.00 2.24
2829 6812 1.202545 GCCCTCCGGAAGATGAAGTAC 60.203 57.143 5.23 0.00 0.00 2.73
2830 6813 2.108168 CCCTCCGGAAGATGAAGTACA 58.892 52.381 5.23 0.00 0.00 2.90
2831 6814 2.700897 CCCTCCGGAAGATGAAGTACAT 59.299 50.000 5.23 0.00 42.47 2.29
2832 6815 3.134804 CCCTCCGGAAGATGAAGTACATT 59.865 47.826 5.23 0.00 39.56 2.71
2833 6816 4.344102 CCCTCCGGAAGATGAAGTACATTA 59.656 45.833 5.23 0.00 39.56 1.90
2834 6817 5.012148 CCCTCCGGAAGATGAAGTACATTAT 59.988 44.000 5.23 0.00 39.56 1.28
2835 6818 6.159988 CCTCCGGAAGATGAAGTACATTATC 58.840 44.000 5.23 0.00 39.56 1.75
2836 6819 6.015010 CCTCCGGAAGATGAAGTACATTATCT 60.015 42.308 5.23 0.00 39.56 1.98
2837 6820 6.982852 TCCGGAAGATGAAGTACATTATCTC 58.017 40.000 0.00 1.42 39.56 2.75
2838 6821 6.778069 TCCGGAAGATGAAGTACATTATCTCT 59.222 38.462 0.00 0.00 39.56 3.10
2839 6822 7.942894 TCCGGAAGATGAAGTACATTATCTCTA 59.057 37.037 0.00 0.00 39.56 2.43
2840 6823 8.240682 CCGGAAGATGAAGTACATTATCTCTAG 58.759 40.741 5.92 1.73 39.56 2.43
2841 6824 8.788806 CGGAAGATGAAGTACATTATCTCTAGT 58.211 37.037 5.92 0.00 39.56 2.57
2842 6825 9.906660 GGAAGATGAAGTACATTATCTCTAGTG 57.093 37.037 5.92 0.00 39.56 2.74
2843 6826 9.906660 GAAGATGAAGTACATTATCTCTAGTGG 57.093 37.037 5.92 0.00 39.56 4.00
2844 6827 7.891561 AGATGAAGTACATTATCTCTAGTGGC 58.108 38.462 0.00 0.00 39.56 5.01
2845 6828 7.728083 AGATGAAGTACATTATCTCTAGTGGCT 59.272 37.037 0.00 0.00 39.56 4.75
2846 6829 7.278461 TGAAGTACATTATCTCTAGTGGCTC 57.722 40.000 0.00 0.00 0.00 4.70
2847 6830 6.265649 TGAAGTACATTATCTCTAGTGGCTCC 59.734 42.308 0.00 0.00 0.00 4.70
2848 6831 5.706447 AGTACATTATCTCTAGTGGCTCCA 58.294 41.667 0.00 0.00 0.00 3.86
2849 6832 6.318913 AGTACATTATCTCTAGTGGCTCCAT 58.681 40.000 0.00 0.00 0.00 3.41
2850 6833 5.480642 ACATTATCTCTAGTGGCTCCATG 57.519 43.478 0.00 0.00 0.00 3.66
2851 6834 5.150715 ACATTATCTCTAGTGGCTCCATGA 58.849 41.667 0.00 0.00 0.00 3.07
2852 6835 5.604231 ACATTATCTCTAGTGGCTCCATGAA 59.396 40.000 0.00 0.00 0.00 2.57
2853 6836 6.271857 ACATTATCTCTAGTGGCTCCATGAAT 59.728 38.462 0.00 0.00 0.00 2.57
2854 6837 4.620589 ATCTCTAGTGGCTCCATGAATG 57.379 45.455 0.00 0.00 0.00 2.67
2855 6838 3.378512 TCTCTAGTGGCTCCATGAATGT 58.621 45.455 0.00 0.00 0.00 2.71
2856 6839 4.546674 TCTCTAGTGGCTCCATGAATGTA 58.453 43.478 0.00 0.00 0.00 2.29
2857 6840 4.962362 TCTCTAGTGGCTCCATGAATGTAA 59.038 41.667 0.00 0.00 0.00 2.41
2858 6841 5.023533 TCTAGTGGCTCCATGAATGTAAC 57.976 43.478 0.00 0.00 0.00 2.50
2859 6842 3.719268 AGTGGCTCCATGAATGTAACA 57.281 42.857 0.00 0.00 0.00 2.41
2860 6843 4.032960 AGTGGCTCCATGAATGTAACAA 57.967 40.909 0.00 0.00 0.00 2.83
2861 6844 4.406456 AGTGGCTCCATGAATGTAACAAA 58.594 39.130 0.00 0.00 0.00 2.83
2862 6845 5.018809 AGTGGCTCCATGAATGTAACAAAT 58.981 37.500 0.00 0.00 0.00 2.32
2863 6846 5.481473 AGTGGCTCCATGAATGTAACAAATT 59.519 36.000 0.00 0.00 0.00 1.82
2864 6847 6.663093 AGTGGCTCCATGAATGTAACAAATTA 59.337 34.615 0.00 0.00 0.00 1.40
2865 6848 7.342799 AGTGGCTCCATGAATGTAACAAATTAT 59.657 33.333 0.00 0.00 0.00 1.28
2866 6849 7.649306 GTGGCTCCATGAATGTAACAAATTATC 59.351 37.037 0.00 0.00 0.00 1.75
2867 6850 7.147976 GGCTCCATGAATGTAACAAATTATCC 58.852 38.462 0.00 0.00 0.00 2.59
2868 6851 7.201902 GGCTCCATGAATGTAACAAATTATCCA 60.202 37.037 0.00 0.00 0.00 3.41
2869 6852 8.196771 GCTCCATGAATGTAACAAATTATCCAA 58.803 33.333 0.00 0.00 0.00 3.53
2872 6855 9.874205 CCATGAATGTAACAAATTATCCAAAGT 57.126 29.630 0.00 0.00 0.00 2.66
2889 6872 5.823209 CAAAGTGATTGGTATGCTGATGA 57.177 39.130 0.00 0.00 35.27 2.92
2890 6873 6.198650 CAAAGTGATTGGTATGCTGATGAA 57.801 37.500 0.00 0.00 35.27 2.57
2891 6874 6.263344 CAAAGTGATTGGTATGCTGATGAAG 58.737 40.000 0.00 0.00 35.27 3.02
2892 6875 5.363562 AGTGATTGGTATGCTGATGAAGA 57.636 39.130 0.00 0.00 0.00 2.87
2893 6876 5.366460 AGTGATTGGTATGCTGATGAAGAG 58.634 41.667 0.00 0.00 0.00 2.85
2894 6877 4.514441 GTGATTGGTATGCTGATGAAGAGG 59.486 45.833 0.00 0.00 0.00 3.69
2895 6878 2.627515 TGGTATGCTGATGAAGAGGC 57.372 50.000 0.00 0.00 0.00 4.70
2896 6879 1.839354 TGGTATGCTGATGAAGAGGCA 59.161 47.619 0.00 0.00 39.06 4.75
2897 6880 2.440627 TGGTATGCTGATGAAGAGGCAT 59.559 45.455 0.00 0.00 45.57 4.40
2898 6881 3.647590 TGGTATGCTGATGAAGAGGCATA 59.352 43.478 0.00 0.00 43.74 3.14
2899 6882 4.287845 TGGTATGCTGATGAAGAGGCATAT 59.712 41.667 9.20 0.00 45.30 1.78
2900 6883 4.634883 GGTATGCTGATGAAGAGGCATATG 59.365 45.833 9.20 0.00 45.30 1.78
2901 6884 2.501261 TGCTGATGAAGAGGCATATGC 58.499 47.619 19.79 19.79 41.14 3.14
2902 6885 2.105993 TGCTGATGAAGAGGCATATGCT 59.894 45.455 26.12 12.92 41.70 3.79
2903 6886 2.484651 GCTGATGAAGAGGCATATGCTG 59.515 50.000 26.12 6.17 41.70 4.41
2904 6887 3.806157 GCTGATGAAGAGGCATATGCTGA 60.806 47.826 26.12 1.78 41.70 4.26
2905 6888 4.580868 CTGATGAAGAGGCATATGCTGAT 58.419 43.478 26.12 13.25 41.70 2.90
2906 6889 4.324267 TGATGAAGAGGCATATGCTGATG 58.676 43.478 26.12 0.00 41.70 3.07
2907 6890 4.041198 TGATGAAGAGGCATATGCTGATGA 59.959 41.667 26.12 7.82 41.70 2.92
2908 6891 4.426736 TGAAGAGGCATATGCTGATGAA 57.573 40.909 26.12 7.04 41.70 2.57
2909 6892 4.386711 TGAAGAGGCATATGCTGATGAAG 58.613 43.478 26.12 0.00 41.70 3.02
2910 6893 4.102054 TGAAGAGGCATATGCTGATGAAGA 59.898 41.667 26.12 2.65 41.70 2.87
2911 6894 4.274602 AGAGGCATATGCTGATGAAGAG 57.725 45.455 26.12 0.00 41.70 2.85
2912 6895 3.902467 AGAGGCATATGCTGATGAAGAGA 59.098 43.478 26.12 0.00 41.70 3.10
2913 6896 3.995705 GAGGCATATGCTGATGAAGAGAC 59.004 47.826 26.12 5.91 41.70 3.36
2914 6897 3.390311 AGGCATATGCTGATGAAGAGACA 59.610 43.478 26.12 0.00 41.70 3.41
2915 6898 4.041815 AGGCATATGCTGATGAAGAGACAT 59.958 41.667 26.12 0.00 41.70 3.06
2916 6899 5.247792 AGGCATATGCTGATGAAGAGACATA 59.752 40.000 26.12 0.00 41.70 2.29
2917 6900 6.070136 AGGCATATGCTGATGAAGAGACATAT 60.070 38.462 26.12 0.00 41.70 1.78
2918 6901 7.125356 AGGCATATGCTGATGAAGAGACATATA 59.875 37.037 26.12 0.00 41.70 0.86
2919 6902 7.932491 GGCATATGCTGATGAAGAGACATATAT 59.068 37.037 26.12 0.00 41.70 0.86
2920 6903 9.978044 GCATATGCTGATGAAGAGACATATATA 57.022 33.333 20.64 0.00 38.21 0.86
2945 6928 7.767250 TCTCTCTCTACATCAACTTGAAAGA 57.233 36.000 0.00 0.00 0.00 2.52
2946 6929 7.825681 TCTCTCTCTACATCAACTTGAAAGAG 58.174 38.462 16.17 16.17 35.20 2.85
2947 6930 7.667635 TCTCTCTCTACATCAACTTGAAAGAGA 59.332 37.037 20.17 20.17 37.93 3.10
2948 6931 8.183104 TCTCTCTACATCAACTTGAAAGAGAA 57.817 34.615 20.98 14.31 38.83 2.87
2949 6932 8.642432 TCTCTCTACATCAACTTGAAAGAGAAA 58.358 33.333 20.98 12.85 38.83 2.52
2950 6933 9.265901 CTCTCTACATCAACTTGAAAGAGAAAA 57.734 33.333 20.98 9.14 38.83 2.29
2951 6934 9.784531 TCTCTACATCAACTTGAAAGAGAAAAT 57.215 29.630 19.64 0.00 37.63 1.82
2988 6971 9.904198 TTCATTAATTCATGTGAAGTCATAGGA 57.096 29.630 0.00 0.00 37.48 2.94
2989 6972 9.904198 TCATTAATTCATGTGAAGTCATAGGAA 57.096 29.630 7.45 7.45 40.79 3.36
2992 6975 7.856145 AATTCATGTGAAGTCATAGGAAGAC 57.144 36.000 10.22 0.00 40.11 3.01
2994 6977 5.970592 TCATGTGAAGTCATAGGAAGACTG 58.029 41.667 0.00 0.00 45.11 3.51
2995 6978 4.808414 TGTGAAGTCATAGGAAGACTGG 57.192 45.455 0.00 0.00 45.11 4.00
2996 6979 3.515502 TGTGAAGTCATAGGAAGACTGGG 59.484 47.826 0.00 0.00 45.11 4.45
2997 6980 2.501723 TGAAGTCATAGGAAGACTGGGC 59.498 50.000 0.00 0.00 45.11 5.36
2998 6981 2.254152 AGTCATAGGAAGACTGGGCA 57.746 50.000 0.00 0.00 44.23 5.36
2999 6982 2.769209 AGTCATAGGAAGACTGGGCAT 58.231 47.619 0.00 0.00 44.23 4.40
3000 6983 2.437281 AGTCATAGGAAGACTGGGCATG 59.563 50.000 0.00 0.00 44.23 4.06
3001 6984 1.770658 TCATAGGAAGACTGGGCATGG 59.229 52.381 0.00 0.00 0.00 3.66
3002 6985 1.143813 ATAGGAAGACTGGGCATGGG 58.856 55.000 0.00 0.00 0.00 4.00
3003 6986 1.635817 TAGGAAGACTGGGCATGGGC 61.636 60.000 0.00 0.00 40.13 5.36
3013 6996 2.902584 GCATGGGCCATGGTTTCC 59.097 61.111 39.54 23.34 41.64 3.13
3014 6997 1.988956 GCATGGGCCATGGTTTCCA 60.989 57.895 39.54 20.42 41.64 3.53
3015 6998 1.339644 GCATGGGCCATGGTTTCCAT 61.340 55.000 39.54 22.35 46.37 3.41
3016 6999 0.754472 CATGGGCCATGGTTTCCATC 59.246 55.000 34.26 4.48 43.15 3.51
3017 7000 0.339162 ATGGGCCATGGTTTCCATCA 59.661 50.000 20.49 8.69 43.15 3.07
3018 7001 0.115944 TGGGCCATGGTTTCCATCAA 59.884 50.000 14.67 0.00 43.15 2.57
3019 7002 0.536724 GGGCCATGGTTTCCATCAAC 59.463 55.000 14.67 0.00 43.15 3.18
3020 7003 1.265236 GGCCATGGTTTCCATCAACA 58.735 50.000 14.67 0.00 43.15 3.33
3021 7004 1.622811 GGCCATGGTTTCCATCAACAA 59.377 47.619 14.67 0.00 43.15 2.83
3022 7005 2.612721 GGCCATGGTTTCCATCAACAAC 60.613 50.000 14.67 0.00 43.15 3.32
3023 7006 2.036992 GCCATGGTTTCCATCAACAACA 59.963 45.455 14.67 0.00 43.15 3.33
3024 7007 3.494048 GCCATGGTTTCCATCAACAACAA 60.494 43.478 14.67 0.00 43.15 2.83
3025 7008 4.701765 CCATGGTTTCCATCAACAACAAA 58.298 39.130 2.57 0.00 43.15 2.83
3026 7009 5.121811 CCATGGTTTCCATCAACAACAAAA 58.878 37.500 2.57 0.00 43.15 2.44
3027 7010 5.764192 CCATGGTTTCCATCAACAACAAAAT 59.236 36.000 2.57 0.00 43.15 1.82
3028 7011 6.293516 CCATGGTTTCCATCAACAACAAAATG 60.294 38.462 2.57 0.00 43.15 2.32
3029 7012 4.574013 TGGTTTCCATCAACAACAAAATGC 59.426 37.500 0.00 0.00 0.00 3.56
3030 7013 4.815846 GGTTTCCATCAACAACAAAATGCT 59.184 37.500 0.00 0.00 0.00 3.79
3031 7014 5.050159 GGTTTCCATCAACAACAAAATGCTC 60.050 40.000 0.00 0.00 0.00 4.26
3032 7015 4.255833 TCCATCAACAACAAAATGCTCC 57.744 40.909 0.00 0.00 0.00 4.70
3033 7016 3.640498 TCCATCAACAACAAAATGCTCCA 59.360 39.130 0.00 0.00 0.00 3.86
3034 7017 3.991773 CCATCAACAACAAAATGCTCCAG 59.008 43.478 0.00 0.00 0.00 3.86
3035 7018 4.262121 CCATCAACAACAAAATGCTCCAGA 60.262 41.667 0.00 0.00 0.00 3.86
3036 7019 4.305989 TCAACAACAAAATGCTCCAGAC 57.694 40.909 0.00 0.00 0.00 3.51
3037 7020 3.698539 TCAACAACAAAATGCTCCAGACA 59.301 39.130 0.00 0.00 0.00 3.41
3038 7021 3.715628 ACAACAAAATGCTCCAGACAC 57.284 42.857 0.00 0.00 0.00 3.67
3039 7022 3.290710 ACAACAAAATGCTCCAGACACT 58.709 40.909 0.00 0.00 0.00 3.55
3040 7023 3.067180 ACAACAAAATGCTCCAGACACTG 59.933 43.478 0.00 0.00 0.00 3.66
3062 7045 5.180367 GGCTGAGCCTCAATTTTAGATTC 57.820 43.478 17.96 0.00 46.69 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
14 15 8.818057 CAAAACAACCCGTATGTCAAATAAAAA 58.182 29.630 0.00 0.00 0.00 1.94
15 16 7.042658 GCAAAACAACCCGTATGTCAAATAAAA 60.043 33.333 0.00 0.00 0.00 1.52
16 17 6.421202 GCAAAACAACCCGTATGTCAAATAAA 59.579 34.615 0.00 0.00 0.00 1.40
17 18 5.921408 GCAAAACAACCCGTATGTCAAATAA 59.079 36.000 0.00 0.00 0.00 1.40
18 19 5.241949 AGCAAAACAACCCGTATGTCAAATA 59.758 36.000 0.00 0.00 0.00 1.40
19 20 4.038642 AGCAAAACAACCCGTATGTCAAAT 59.961 37.500 0.00 0.00 0.00 2.32
20 21 3.381908 AGCAAAACAACCCGTATGTCAAA 59.618 39.130 0.00 0.00 0.00 2.69
21 22 2.952978 AGCAAAACAACCCGTATGTCAA 59.047 40.909 0.00 0.00 0.00 3.18
22 23 2.292016 CAGCAAAACAACCCGTATGTCA 59.708 45.455 0.00 0.00 0.00 3.58
23 24 2.292292 ACAGCAAAACAACCCGTATGTC 59.708 45.455 0.00 0.00 0.00 3.06
24 25 2.303175 ACAGCAAAACAACCCGTATGT 58.697 42.857 0.00 0.00 0.00 2.29
25 26 3.500680 ACTACAGCAAAACAACCCGTATG 59.499 43.478 0.00 0.00 0.00 2.39
26 27 3.746940 ACTACAGCAAAACAACCCGTAT 58.253 40.909 0.00 0.00 0.00 3.06
27 28 3.196939 ACTACAGCAAAACAACCCGTA 57.803 42.857 0.00 0.00 0.00 4.02
28 29 2.047002 ACTACAGCAAAACAACCCGT 57.953 45.000 0.00 0.00 0.00 5.28
29 30 3.430333 AAACTACAGCAAAACAACCCG 57.570 42.857 0.00 0.00 0.00 5.28
30 31 5.509716 ACTAAACTACAGCAAAACAACCC 57.490 39.130 0.00 0.00 0.00 4.11
31 32 7.821595 AAAACTAAACTACAGCAAAACAACC 57.178 32.000 0.00 0.00 0.00 3.77
477 478 3.395941 CTCTATGTTTTGGAGGGCCCTAT 59.604 47.826 28.78 15.73 35.38 2.57
480 481 2.024306 GCTCTATGTTTTGGAGGGCCC 61.024 57.143 16.46 16.46 29.94 5.80
481 482 1.393603 GCTCTATGTTTTGGAGGGCC 58.606 55.000 0.00 0.00 29.94 5.80
482 483 1.393603 GGCTCTATGTTTTGGAGGGC 58.606 55.000 0.00 0.00 35.86 5.19
508 509 7.325338 CCGATCTTATTATTTCTCGCGAAACTA 59.675 37.037 11.33 3.86 41.58 2.24
513 514 3.918591 GCCGATCTTATTATTTCTCGCGA 59.081 43.478 9.26 9.26 0.00 5.87
514 515 3.673338 TGCCGATCTTATTATTTCTCGCG 59.327 43.478 0.00 0.00 0.00 5.87
519 520 7.573283 GCCTACCTTTGCCGATCTTATTATTTC 60.573 40.741 0.00 0.00 0.00 2.17
526 548 1.140252 GGCCTACCTTTGCCGATCTTA 59.860 52.381 0.00 0.00 38.00 2.10
575 597 9.613957 CCATATACAAGAAGAGTAGAATGTACG 57.386 37.037 0.00 0.00 0.00 3.67
578 600 8.643324 GGACCATATACAAGAAGAGTAGAATGT 58.357 37.037 0.00 0.00 0.00 2.71
694 720 4.811555 TTATATTCTGATGTTGCACGGC 57.188 40.909 0.00 0.00 0.00 5.68
717 747 6.196724 GTCGGAAATTAGATTCGTCTACACAG 59.803 42.308 0.00 0.00 0.00 3.66
737 767 0.806868 ATCGAGCTTTGTACGTCGGA 59.193 50.000 0.00 0.00 33.21 4.55
740 770 3.102276 CAGAGATCGAGCTTTGTACGTC 58.898 50.000 12.70 0.00 0.00 4.34
744 774 1.202302 CCGCAGAGATCGAGCTTTGTA 60.202 52.381 20.60 0.00 0.00 2.41
786 816 2.574322 GACGTACGTAAAGCGACTGAA 58.426 47.619 22.87 0.00 44.77 3.02
919 979 1.295423 GGCTAGCCGTGAGTTTGGA 59.705 57.895 20.16 0.00 0.00 3.53
920 980 1.003839 TGGCTAGCCGTGAGTTTGG 60.004 57.895 28.28 0.00 39.42 3.28
937 997 1.623811 AGTAAGTGTGGCTAGTGGGTG 59.376 52.381 0.00 0.00 0.00 4.61
975 1040 0.463474 CCTTCCTGAGCTAAGCTGGC 60.463 60.000 0.00 4.02 39.88 4.85
977 1042 2.482839 GCTACCTTCCTGAGCTAAGCTG 60.483 54.545 0.00 0.00 39.88 4.24
1064 1135 2.398554 GCGGCGGCAGAAGAAATGA 61.399 57.895 9.78 0.00 39.62 2.57
1066 1137 3.499737 CGCGGCGGCAGAAGAAAT 61.500 61.111 15.84 0.00 39.92 2.17
1092 1163 0.772124 AGTTCTTTGGCAGAGGGGGA 60.772 55.000 5.08 0.00 31.12 4.81
1283 1705 8.055181 AGTAGAATGACATTGTGGGAATACATT 58.945 33.333 5.14 0.00 0.00 2.71
1284 1706 7.577303 AGTAGAATGACATTGTGGGAATACAT 58.423 34.615 5.14 0.00 0.00 2.29
1290 1712 5.430886 CATGAGTAGAATGACATTGTGGGA 58.569 41.667 5.14 0.00 0.00 4.37
1313 1736 1.739067 AGGATTTGGTTAGCGTCAGC 58.261 50.000 0.00 0.00 45.58 4.26
1498 1938 1.134965 GTGAAGTCACGGCTCATAGCT 60.135 52.381 0.00 0.00 38.03 3.32
1559 5536 1.920734 TTCTGGGCGCCCATGTACAT 61.921 55.000 46.65 1.41 46.15 2.29
1620 5597 4.080919 TGTTGAATGATTCTCCATCGAGGT 60.081 41.667 6.73 0.00 39.02 3.85
1622 5599 6.225703 GATGTTGAATGATTCTCCATCGAG 57.774 41.667 16.16 0.00 34.08 4.04
1636 5613 3.798878 CGATGTCTGTAGCGATGTTGAAT 59.201 43.478 0.00 0.00 0.00 2.57
1637 5614 3.179048 CGATGTCTGTAGCGATGTTGAA 58.821 45.455 0.00 0.00 0.00 2.69
1981 5958 2.766313 CAGTCGGTGGAGAAAATGTCA 58.234 47.619 0.00 0.00 0.00 3.58
1987 5964 0.250295 CCTTGCAGTCGGTGGAGAAA 60.250 55.000 0.00 0.00 0.00 2.52
2027 6004 1.995066 TGACCATGGAGATGCCGGT 60.995 57.895 21.47 0.00 40.66 5.28
2053 6033 3.829886 TGAGGAATTGCTTAGTTTGCG 57.170 42.857 0.00 0.00 0.00 4.85
2056 6036 6.513393 CGTTGTCTTGAGGAATTGCTTAGTTT 60.513 38.462 0.00 0.00 0.00 2.66
2065 6045 3.560068 GTGTGACGTTGTCTTGAGGAATT 59.440 43.478 0.00 0.00 33.15 2.17
2081 6062 1.076332 GCCGGTTACATCAGTGTGAC 58.924 55.000 1.90 0.00 42.37 3.67
2086 6067 3.321111 CAGTATAGGCCGGTTACATCAGT 59.679 47.826 1.90 0.00 0.00 3.41
2096 6077 3.006859 TGTTCATCATCAGTATAGGCCGG 59.993 47.826 0.00 0.00 0.00 6.13
2167 6148 3.490078 GGTCGTTGATTTCTGGCACAAAA 60.490 43.478 0.00 0.00 38.70 2.44
2209 6190 7.490079 TCATTACAATTTGCAGCATGAAAGATC 59.510 33.333 0.00 0.00 33.21 2.75
2235 6216 1.133976 ACTGCACAGACAGGAAAGCTT 60.134 47.619 4.31 0.00 42.21 3.74
2236 6217 0.471617 ACTGCACAGACAGGAAAGCT 59.528 50.000 4.31 0.00 42.21 3.74
2245 6226 6.016610 TGACCCTAAAATAAAACTGCACAGAC 60.017 38.462 4.31 0.00 0.00 3.51
2248 6229 6.686630 CATGACCCTAAAATAAAACTGCACA 58.313 36.000 0.00 0.00 0.00 4.57
2259 6240 5.999205 TTCACATTGCATGACCCTAAAAT 57.001 34.783 0.00 0.00 0.00 1.82
2263 6244 5.392919 CGAATTTTCACATTGCATGACCCTA 60.393 40.000 0.00 0.00 0.00 3.53
2264 6245 4.618927 CGAATTTTCACATTGCATGACCCT 60.619 41.667 0.00 0.00 0.00 4.34
2265 6246 3.613737 CGAATTTTCACATTGCATGACCC 59.386 43.478 0.00 0.00 0.00 4.46
2267 6248 3.922240 AGCGAATTTTCACATTGCATGAC 59.078 39.130 0.00 0.00 0.00 3.06
2268 6249 4.177165 AGCGAATTTTCACATTGCATGA 57.823 36.364 0.00 0.00 0.00 3.07
2269 6250 4.914312 AAGCGAATTTTCACATTGCATG 57.086 36.364 0.00 0.00 0.00 4.06
2270 6251 5.577945 CCTAAAGCGAATTTTCACATTGCAT 59.422 36.000 0.00 0.00 32.01 3.96
2271 6252 4.922692 CCTAAAGCGAATTTTCACATTGCA 59.077 37.500 0.00 0.00 32.01 4.08
2272 6253 4.923281 ACCTAAAGCGAATTTTCACATTGC 59.077 37.500 0.00 0.00 32.01 3.56
2273 6254 6.381801 AGACCTAAAGCGAATTTTCACATTG 58.618 36.000 0.00 0.00 32.01 2.82
2275 6256 6.349363 GGAAGACCTAAAGCGAATTTTCACAT 60.349 38.462 0.00 0.00 32.01 3.21
2276 6257 5.048991 GGAAGACCTAAAGCGAATTTTCACA 60.049 40.000 0.00 0.00 32.01 3.58
2277 6258 5.181433 AGGAAGACCTAAAGCGAATTTTCAC 59.819 40.000 0.00 0.00 45.83 3.18
2279 6260 5.881777 AGGAAGACCTAAAGCGAATTTTC 57.118 39.130 0.00 0.00 45.83 2.29
2300 6281 7.523415 ACTAGAACTAGAATAGGGAGGAAGAG 58.477 42.308 14.64 0.00 44.97 2.85
2306 6287 9.802039 ATTCAGTACTAGAACTAGAATAGGGAG 57.198 37.037 14.64 0.00 44.97 4.30
2343 6324 2.293170 CATCGCTCTGTGGAGACTCTA 58.707 52.381 1.74 0.00 41.86 2.43
2355 6338 3.868077 GCATGAAACTCTTACATCGCTCT 59.132 43.478 0.00 0.00 0.00 4.09
2385 6368 6.530019 ACAAGTTAATTAAGCAGGGATTGG 57.470 37.500 0.00 0.00 0.00 3.16
2426 6409 7.046292 TCTCTTTACACTTTACTGCTACACA 57.954 36.000 0.00 0.00 0.00 3.72
2427 6410 7.941795 TTCTCTTTACACTTTACTGCTACAC 57.058 36.000 0.00 0.00 0.00 2.90
2428 6411 8.364894 TCATTCTCTTTACACTTTACTGCTACA 58.635 33.333 0.00 0.00 0.00 2.74
2429 6412 8.758633 TCATTCTCTTTACACTTTACTGCTAC 57.241 34.615 0.00 0.00 0.00 3.58
2430 6413 9.772973 TTTCATTCTCTTTACACTTTACTGCTA 57.227 29.630 0.00 0.00 0.00 3.49
2431 6414 8.677148 TTTCATTCTCTTTACACTTTACTGCT 57.323 30.769 0.00 0.00 0.00 4.24
2432 6415 9.899226 ATTTTCATTCTCTTTACACTTTACTGC 57.101 29.630 0.00 0.00 0.00 4.40
2444 6427 9.428097 GAGCCAAATTGTATTTTCATTCTCTTT 57.572 29.630 0.00 0.00 0.00 2.52
2445 6428 8.810041 AGAGCCAAATTGTATTTTCATTCTCTT 58.190 29.630 0.00 0.00 0.00 2.85
2446 6429 8.358582 AGAGCCAAATTGTATTTTCATTCTCT 57.641 30.769 0.00 0.00 0.00 3.10
2447 6430 8.866956 CAAGAGCCAAATTGTATTTTCATTCTC 58.133 33.333 0.00 0.00 0.00 2.87
2448 6431 7.820872 CCAAGAGCCAAATTGTATTTTCATTCT 59.179 33.333 0.00 0.00 0.00 2.40
2449 6432 7.064966 CCCAAGAGCCAAATTGTATTTTCATTC 59.935 37.037 0.00 0.00 0.00 2.67
2450 6433 6.880529 CCCAAGAGCCAAATTGTATTTTCATT 59.119 34.615 0.00 0.00 0.00 2.57
2451 6434 6.213195 TCCCAAGAGCCAAATTGTATTTTCAT 59.787 34.615 0.00 0.00 0.00 2.57
2452 6435 5.541868 TCCCAAGAGCCAAATTGTATTTTCA 59.458 36.000 0.00 0.00 0.00 2.69
2453 6436 6.036577 TCCCAAGAGCCAAATTGTATTTTC 57.963 37.500 0.00 0.00 0.00 2.29
2454 6437 6.041423 CTCCCAAGAGCCAAATTGTATTTT 57.959 37.500 0.00 0.00 32.13 1.82
2455 6438 5.665916 CTCCCAAGAGCCAAATTGTATTT 57.334 39.130 0.00 0.00 32.13 1.40
2484 6467 1.184970 ACATTTTTGGTGGGCGGGAG 61.185 55.000 0.00 0.00 0.00 4.30
2485 6468 0.760945 AACATTTTTGGTGGGCGGGA 60.761 50.000 0.00 0.00 0.00 5.14
2486 6469 0.107643 AAACATTTTTGGTGGGCGGG 59.892 50.000 0.00 0.00 0.00 6.13
2487 6470 1.960417 AAAACATTTTTGGTGGGCGG 58.040 45.000 0.00 0.00 0.00 6.13
2488 6471 4.612486 GCAATAAAACATTTTTGGTGGGCG 60.612 41.667 0.00 0.00 0.00 6.13
2489 6472 4.276926 TGCAATAAAACATTTTTGGTGGGC 59.723 37.500 0.00 0.00 0.00 5.36
2490 6473 6.382869 TTGCAATAAAACATTTTTGGTGGG 57.617 33.333 0.00 0.00 0.00 4.61
2491 6474 7.919621 ACATTTGCAATAAAACATTTTTGGTGG 59.080 29.630 0.00 0.00 0.00 4.61
2492 6475 8.853469 ACATTTGCAATAAAACATTTTTGGTG 57.147 26.923 0.00 0.00 0.00 4.17
2493 6476 8.680903 TGACATTTGCAATAAAACATTTTTGGT 58.319 25.926 0.00 0.00 0.00 3.67
2494 6477 9.512435 TTGACATTTGCAATAAAACATTTTTGG 57.488 25.926 0.00 0.00 0.00 3.28
2522 6505 8.801715 GTGTGACAATGAACACATCTATTTTT 57.198 30.769 16.68 0.00 46.20 1.94
2532 6515 6.645700 ACATTTTTGTGTGACAATGAACAC 57.354 33.333 13.99 13.99 45.55 3.32
2533 6516 7.276658 GGTAACATTTTTGTGTGACAATGAACA 59.723 33.333 1.58 0.00 38.00 3.18
2534 6517 7.491048 AGGTAACATTTTTGTGTGACAATGAAC 59.509 33.333 1.58 0.43 37.13 3.18
2535 6518 7.490725 CAGGTAACATTTTTGTGTGACAATGAA 59.509 33.333 1.58 0.00 37.13 2.57
2536 6519 6.977502 CAGGTAACATTTTTGTGTGACAATGA 59.022 34.615 1.58 0.00 37.13 2.57
2537 6520 6.292274 GCAGGTAACATTTTTGTGTGACAATG 60.292 38.462 0.00 0.00 37.13 2.82
2538 6521 5.752955 GCAGGTAACATTTTTGTGTGACAAT 59.247 36.000 0.00 0.00 37.13 2.71
2539 6522 5.105752 GCAGGTAACATTTTTGTGTGACAA 58.894 37.500 0.00 0.00 35.52 3.18
2540 6523 4.158579 TGCAGGTAACATTTTTGTGTGACA 59.841 37.500 0.00 0.00 35.52 3.58
2541 6524 4.677584 TGCAGGTAACATTTTTGTGTGAC 58.322 39.130 0.00 0.00 41.41 3.67
2542 6525 4.991153 TGCAGGTAACATTTTTGTGTGA 57.009 36.364 0.00 0.00 41.41 3.58
2543 6526 6.601741 ATTTGCAGGTAACATTTTTGTGTG 57.398 33.333 0.00 0.00 41.41 3.82
2544 6527 7.622893 AAATTTGCAGGTAACATTTTTGTGT 57.377 28.000 0.00 0.00 41.41 3.72
2545 6528 8.908172 AAAAATTTGCAGGTAACATTTTTGTG 57.092 26.923 0.00 0.00 36.27 3.33
2547 6530 9.662545 CCTAAAAATTTGCAGGTAACATTTTTG 57.337 29.630 9.29 8.17 37.52 2.44
2548 6531 9.620259 TCCTAAAAATTTGCAGGTAACATTTTT 57.380 25.926 14.80 0.00 39.32 1.94
2549 6532 9.271828 CTCCTAAAAATTTGCAGGTAACATTTT 57.728 29.630 14.80 0.00 41.41 1.82
2550 6533 7.877612 CCTCCTAAAAATTTGCAGGTAACATTT 59.122 33.333 14.80 0.00 41.41 2.32
2551 6534 7.234577 TCCTCCTAAAAATTTGCAGGTAACATT 59.765 33.333 14.80 0.00 41.41 2.71
2552 6535 6.723977 TCCTCCTAAAAATTTGCAGGTAACAT 59.276 34.615 14.80 0.00 41.41 2.71
2553 6536 6.071984 TCCTCCTAAAAATTTGCAGGTAACA 58.928 36.000 14.80 0.09 41.41 2.41
2554 6537 6.584185 TCCTCCTAAAAATTTGCAGGTAAC 57.416 37.500 14.80 0.00 0.00 2.50
2555 6538 7.604657 TTTCCTCCTAAAAATTTGCAGGTAA 57.395 32.000 14.80 8.03 0.00 2.85
2556 6539 7.453126 TGATTTCCTCCTAAAAATTTGCAGGTA 59.547 33.333 14.80 5.04 0.00 3.08
2557 6540 6.269769 TGATTTCCTCCTAAAAATTTGCAGGT 59.730 34.615 14.80 0.00 0.00 4.00
2558 6541 6.591448 GTGATTTCCTCCTAAAAATTTGCAGG 59.409 38.462 10.73 10.73 0.00 4.85
2559 6542 7.153985 TGTGATTTCCTCCTAAAAATTTGCAG 58.846 34.615 0.00 0.00 0.00 4.41
2560 6543 7.060383 TGTGATTTCCTCCTAAAAATTTGCA 57.940 32.000 0.00 0.00 0.00 4.08
2561 6544 7.657354 ACTTGTGATTTCCTCCTAAAAATTTGC 59.343 33.333 0.00 0.00 0.00 3.68
2562 6545 8.981647 CACTTGTGATTTCCTCCTAAAAATTTG 58.018 33.333 0.00 0.00 0.00 2.32
2563 6546 8.704668 ACACTTGTGATTTCCTCCTAAAAATTT 58.295 29.630 7.83 0.00 0.00 1.82
2564 6547 8.250143 ACACTTGTGATTTCCTCCTAAAAATT 57.750 30.769 7.83 0.00 0.00 1.82
2565 6548 7.839680 ACACTTGTGATTTCCTCCTAAAAAT 57.160 32.000 7.83 0.00 0.00 1.82
2566 6549 7.654022 AACACTTGTGATTTCCTCCTAAAAA 57.346 32.000 7.83 0.00 0.00 1.94
2567 6550 7.654022 AAACACTTGTGATTTCCTCCTAAAA 57.346 32.000 7.83 0.00 0.00 1.52
2568 6551 7.340743 TCAAAACACTTGTGATTTCCTCCTAAA 59.659 33.333 7.83 0.00 0.00 1.85
2569 6552 6.831353 TCAAAACACTTGTGATTTCCTCCTAA 59.169 34.615 7.83 0.00 0.00 2.69
2570 6553 6.361433 TCAAAACACTTGTGATTTCCTCCTA 58.639 36.000 7.83 0.00 0.00 2.94
2571 6554 5.200483 TCAAAACACTTGTGATTTCCTCCT 58.800 37.500 7.83 0.00 0.00 3.69
2572 6555 5.514274 TCAAAACACTTGTGATTTCCTCC 57.486 39.130 7.83 0.00 0.00 4.30
2573 6556 6.860023 CAGATCAAAACACTTGTGATTTCCTC 59.140 38.462 7.83 7.09 32.18 3.71
2574 6557 6.322201 ACAGATCAAAACACTTGTGATTTCCT 59.678 34.615 7.83 3.19 32.18 3.36
2575 6558 6.418819 CACAGATCAAAACACTTGTGATTTCC 59.581 38.462 7.83 1.22 32.18 3.13
2576 6559 6.074676 GCACAGATCAAAACACTTGTGATTTC 60.075 38.462 7.83 0.00 32.18 2.17
2577 6560 5.750067 GCACAGATCAAAACACTTGTGATTT 59.250 36.000 7.83 5.53 32.18 2.17
2578 6561 5.163530 TGCACAGATCAAAACACTTGTGATT 60.164 36.000 7.83 0.00 32.18 2.57
2579 6562 4.338964 TGCACAGATCAAAACACTTGTGAT 59.661 37.500 7.83 0.00 34.71 3.06
2580 6563 3.693578 TGCACAGATCAAAACACTTGTGA 59.306 39.130 7.83 0.00 0.00 3.58
2581 6564 4.031418 TGCACAGATCAAAACACTTGTG 57.969 40.909 0.00 0.00 0.00 3.33
2582 6565 4.717233 TTGCACAGATCAAAACACTTGT 57.283 36.364 0.00 0.00 0.00 3.16
2583 6566 4.863689 TGTTTGCACAGATCAAAACACTTG 59.136 37.500 0.00 0.00 35.49 3.16
2584 6567 5.070770 TGTTTGCACAGATCAAAACACTT 57.929 34.783 0.00 0.00 35.49 3.16
2585 6568 4.717233 TGTTTGCACAGATCAAAACACT 57.283 36.364 0.00 0.00 35.49 3.55
2586 6569 5.776519 TTTGTTTGCACAGATCAAAACAC 57.223 34.783 0.00 0.00 35.49 3.32
2589 6572 5.350914 CCTGTTTTGTTTGCACAGATCAAAA 59.649 36.000 0.00 1.74 40.43 2.44
2590 6573 4.869297 CCTGTTTTGTTTGCACAGATCAAA 59.131 37.500 0.00 0.00 40.43 2.69
2591 6574 4.081752 ACCTGTTTTGTTTGCACAGATCAA 60.082 37.500 0.00 0.00 40.43 2.57
2592 6575 3.446873 ACCTGTTTTGTTTGCACAGATCA 59.553 39.130 0.00 0.00 40.43 2.92
2593 6576 4.045636 ACCTGTTTTGTTTGCACAGATC 57.954 40.909 0.02 0.00 40.43 2.75
2594 6577 4.470334 AACCTGTTTTGTTTGCACAGAT 57.530 36.364 0.02 0.00 40.43 2.90
2595 6578 3.951775 AACCTGTTTTGTTTGCACAGA 57.048 38.095 0.02 0.00 40.43 3.41
2596 6579 6.238076 GGAAATAACCTGTTTTGTTTGCACAG 60.238 38.462 0.00 0.00 38.14 3.66
2597 6580 5.582665 GGAAATAACCTGTTTTGTTTGCACA 59.417 36.000 0.00 0.00 0.00 4.57
2598 6581 5.582665 TGGAAATAACCTGTTTTGTTTGCAC 59.417 36.000 0.00 0.00 0.00 4.57
2599 6582 5.734720 TGGAAATAACCTGTTTTGTTTGCA 58.265 33.333 0.00 0.00 0.00 4.08
2600 6583 6.670077 TTGGAAATAACCTGTTTTGTTTGC 57.330 33.333 0.00 0.00 0.00 3.68
2601 6584 8.672815 ACATTTGGAAATAACCTGTTTTGTTTG 58.327 29.630 0.00 0.00 0.00 2.93
2602 6585 8.800370 ACATTTGGAAATAACCTGTTTTGTTT 57.200 26.923 0.00 0.00 0.00 2.83
2603 6586 8.800370 AACATTTGGAAATAACCTGTTTTGTT 57.200 26.923 0.00 0.00 0.00 2.83
2604 6587 9.320352 GTAACATTTGGAAATAACCTGTTTTGT 57.680 29.630 0.00 0.00 31.55 2.83
2605 6588 9.319143 TGTAACATTTGGAAATAACCTGTTTTG 57.681 29.630 0.00 0.00 31.55 2.44
2606 6589 9.320352 GTGTAACATTTGGAAATAACCTGTTTT 57.680 29.630 0.00 0.00 36.32 2.43
2607 6590 8.700973 AGTGTAACATTTGGAAATAACCTGTTT 58.299 29.630 0.00 0.00 41.43 2.83
2608 6591 8.245195 AGTGTAACATTTGGAAATAACCTGTT 57.755 30.769 0.00 0.00 41.43 3.16
2609 6592 7.833285 AGTGTAACATTTGGAAATAACCTGT 57.167 32.000 0.00 0.00 41.43 4.00
2623 6606 9.980780 GTGCAAAAACAAAATAAGTGTAACATT 57.019 25.926 0.00 0.00 41.43 2.71
2624 6607 8.608317 GGTGCAAAAACAAAATAAGTGTAACAT 58.392 29.630 0.00 0.00 41.43 2.71
2625 6608 7.201444 CGGTGCAAAAACAAAATAAGTGTAACA 60.201 33.333 0.00 0.00 41.43 2.41
2626 6609 7.009357 TCGGTGCAAAAACAAAATAAGTGTAAC 59.991 33.333 0.00 0.00 0.00 2.50
2627 6610 7.009357 GTCGGTGCAAAAACAAAATAAGTGTAA 59.991 33.333 0.00 0.00 0.00 2.41
2628 6611 6.472808 GTCGGTGCAAAAACAAAATAAGTGTA 59.527 34.615 0.00 0.00 0.00 2.90
2629 6612 5.289917 GTCGGTGCAAAAACAAAATAAGTGT 59.710 36.000 0.00 0.00 0.00 3.55
2630 6613 5.553581 CGTCGGTGCAAAAACAAAATAAGTG 60.554 40.000 0.00 0.00 0.00 3.16
2631 6614 4.501198 CGTCGGTGCAAAAACAAAATAAGT 59.499 37.500 0.00 0.00 0.00 2.24
2632 6615 4.735822 TCGTCGGTGCAAAAACAAAATAAG 59.264 37.500 0.00 0.00 0.00 1.73
2633 6616 4.669318 TCGTCGGTGCAAAAACAAAATAA 58.331 34.783 0.00 0.00 0.00 1.40
2634 6617 4.288670 TCGTCGGTGCAAAAACAAAATA 57.711 36.364 0.00 0.00 0.00 1.40
2635 6618 3.152261 TCGTCGGTGCAAAAACAAAAT 57.848 38.095 0.00 0.00 0.00 1.82
2636 6619 2.631418 TCGTCGGTGCAAAAACAAAA 57.369 40.000 0.00 0.00 0.00 2.44
2637 6620 2.520979 CTTCGTCGGTGCAAAAACAAA 58.479 42.857 0.00 0.00 0.00 2.83
2638 6621 1.795889 GCTTCGTCGGTGCAAAAACAA 60.796 47.619 0.00 0.00 0.00 2.83
2639 6622 0.248296 GCTTCGTCGGTGCAAAAACA 60.248 50.000 0.00 0.00 0.00 2.83
2640 6623 0.248296 TGCTTCGTCGGTGCAAAAAC 60.248 50.000 9.86 0.00 33.48 2.43
2641 6624 0.248296 GTGCTTCGTCGGTGCAAAAA 60.248 50.000 12.99 0.00 38.50 1.94
2642 6625 1.353804 GTGCTTCGTCGGTGCAAAA 59.646 52.632 12.99 0.00 38.50 2.44
2643 6626 2.539338 GGTGCTTCGTCGGTGCAAA 61.539 57.895 12.99 0.00 38.50 3.68
2644 6627 2.970324 GGTGCTTCGTCGGTGCAA 60.970 61.111 12.99 0.00 38.50 4.08
2647 6630 0.734942 ATAACGGTGCTTCGTCGGTG 60.735 55.000 5.48 0.00 43.07 4.94
2648 6631 0.810648 TATAACGGTGCTTCGTCGGT 59.189 50.000 5.48 0.00 43.07 4.69
2649 6632 1.194495 GTATAACGGTGCTTCGTCGG 58.806 55.000 5.48 0.00 43.07 4.79
2650 6633 1.194495 GGTATAACGGTGCTTCGTCG 58.806 55.000 5.48 0.00 43.07 5.12
2651 6634 1.194495 CGGTATAACGGTGCTTCGTC 58.806 55.000 1.07 0.00 43.07 4.20
2652 6635 0.527565 ACGGTATAACGGTGCTTCGT 59.472 50.000 15.80 0.00 46.08 3.85
2653 6636 1.632422 AACGGTATAACGGTGCTTCG 58.368 50.000 15.80 0.00 38.39 3.79
2654 6637 2.028404 CGAAACGGTATAACGGTGCTTC 59.972 50.000 15.80 10.15 38.39 3.86
2655 6638 1.994779 CGAAACGGTATAACGGTGCTT 59.005 47.619 15.80 2.03 38.39 3.91
2656 6639 1.632422 CGAAACGGTATAACGGTGCT 58.368 50.000 15.80 0.00 38.39 4.40
2657 6640 0.025384 GCGAAACGGTATAACGGTGC 59.975 55.000 15.80 5.43 38.39 5.01
2658 6641 1.348276 TGCGAAACGGTATAACGGTG 58.652 50.000 15.80 0.00 38.39 4.94
2659 6642 1.928503 CATGCGAAACGGTATAACGGT 59.071 47.619 15.80 4.56 38.39 4.83
2660 6643 2.195096 TCATGCGAAACGGTATAACGG 58.805 47.619 15.80 0.00 38.39 4.44
2661 6644 3.910862 TTCATGCGAAACGGTATAACG 57.089 42.857 9.04 9.04 40.31 3.18
2662 6645 6.525280 ACAATTTTCATGCGAAACGGTATAAC 59.475 34.615 0.00 0.00 40.84 1.89
2663 6646 6.524933 CACAATTTTCATGCGAAACGGTATAA 59.475 34.615 0.00 0.00 40.84 0.98
2664 6647 6.024664 CACAATTTTCATGCGAAACGGTATA 58.975 36.000 0.00 0.00 40.84 1.47
2665 6648 4.856487 CACAATTTTCATGCGAAACGGTAT 59.144 37.500 0.00 0.00 40.84 2.73
2666 6649 4.023963 TCACAATTTTCATGCGAAACGGTA 60.024 37.500 0.00 0.00 40.84 4.02
2667 6650 3.049206 CACAATTTTCATGCGAAACGGT 58.951 40.909 0.00 0.00 40.84 4.83
2668 6651 3.304257 TCACAATTTTCATGCGAAACGG 58.696 40.909 0.00 0.00 40.84 4.44
2669 6652 4.661402 GCTTCACAATTTTCATGCGAAACG 60.661 41.667 0.00 0.00 40.84 3.60
2670 6653 4.208873 TGCTTCACAATTTTCATGCGAAAC 59.791 37.500 0.00 0.00 40.84 2.78
2671 6654 4.208873 GTGCTTCACAATTTTCATGCGAAA 59.791 37.500 0.00 0.00 35.47 3.46
2672 6655 3.735240 GTGCTTCACAATTTTCATGCGAA 59.265 39.130 0.00 0.00 34.08 4.70
2673 6656 3.307674 GTGCTTCACAATTTTCATGCGA 58.692 40.909 0.00 0.00 34.08 5.10
2674 6657 2.089427 CGTGCTTCACAATTTTCATGCG 59.911 45.455 0.00 0.00 33.40 4.73
2675 6658 2.159934 GCGTGCTTCACAATTTTCATGC 60.160 45.455 0.00 0.00 33.40 4.06
2676 6659 3.311106 AGCGTGCTTCACAATTTTCATG 58.689 40.909 0.00 0.00 33.40 3.07
2677 6660 3.648339 AGCGTGCTTCACAATTTTCAT 57.352 38.095 0.00 0.00 33.40 2.57
2678 6661 3.114809 CAAGCGTGCTTCACAATTTTCA 58.885 40.909 3.68 0.00 33.40 2.69
2679 6662 3.115554 ACAAGCGTGCTTCACAATTTTC 58.884 40.909 3.68 0.00 33.40 2.29
2680 6663 3.163630 ACAAGCGTGCTTCACAATTTT 57.836 38.095 3.68 0.00 33.40 1.82
2681 6664 2.869233 ACAAGCGTGCTTCACAATTT 57.131 40.000 3.68 0.00 33.40 1.82
2682 6665 2.869233 AACAAGCGTGCTTCACAATT 57.131 40.000 3.68 0.00 33.40 2.32
2683 6666 2.616376 TGTAACAAGCGTGCTTCACAAT 59.384 40.909 3.68 0.00 33.40 2.71
2684 6667 2.010497 TGTAACAAGCGTGCTTCACAA 58.990 42.857 3.68 0.00 33.40 3.33
2685 6668 1.329292 GTGTAACAAGCGTGCTTCACA 59.671 47.619 15.27 11.88 36.32 3.58
2686 6669 1.597663 AGTGTAACAAGCGTGCTTCAC 59.402 47.619 13.31 13.31 41.43 3.18
2687 6670 1.948104 AGTGTAACAAGCGTGCTTCA 58.052 45.000 3.68 0.00 41.43 3.02
2688 6671 3.246699 TGTTAGTGTAACAAGCGTGCTTC 59.753 43.478 3.68 0.00 44.95 3.86
2689 6672 3.199677 TGTTAGTGTAACAAGCGTGCTT 58.800 40.909 0.24 0.24 44.95 3.91
2690 6673 2.828877 TGTTAGTGTAACAAGCGTGCT 58.171 42.857 0.00 0.00 44.95 4.40
2698 6681 9.602568 TTTGTAGATGTTCTTGTTAGTGTAACA 57.397 29.630 0.00 0.00 46.13 2.41
2758 6741 9.401058 CTCCCTAATGAACAGTAAAATCAAGAT 57.599 33.333 0.00 0.00 0.00 2.40
2759 6742 7.336931 GCTCCCTAATGAACAGTAAAATCAAGA 59.663 37.037 0.00 0.00 0.00 3.02
2760 6743 7.121168 TGCTCCCTAATGAACAGTAAAATCAAG 59.879 37.037 0.00 0.00 0.00 3.02
2761 6744 6.945435 TGCTCCCTAATGAACAGTAAAATCAA 59.055 34.615 0.00 0.00 0.00 2.57
2762 6745 6.480763 TGCTCCCTAATGAACAGTAAAATCA 58.519 36.000 0.00 0.00 0.00 2.57
2763 6746 7.573968 ATGCTCCCTAATGAACAGTAAAATC 57.426 36.000 0.00 0.00 0.00 2.17
2764 6747 9.071276 CATATGCTCCCTAATGAACAGTAAAAT 57.929 33.333 0.00 0.00 0.00 1.82
2765 6748 7.013274 GCATATGCTCCCTAATGAACAGTAAAA 59.987 37.037 20.64 0.00 38.21 1.52
2766 6749 6.486657 GCATATGCTCCCTAATGAACAGTAAA 59.513 38.462 20.64 0.00 38.21 2.01
2767 6750 5.997746 GCATATGCTCCCTAATGAACAGTAA 59.002 40.000 20.64 0.00 38.21 2.24
2768 6751 5.071653 TGCATATGCTCCCTAATGAACAGTA 59.928 40.000 27.13 0.00 42.66 2.74
2769 6752 4.141413 TGCATATGCTCCCTAATGAACAGT 60.141 41.667 27.13 0.00 42.66 3.55
2770 6753 4.214971 GTGCATATGCTCCCTAATGAACAG 59.785 45.833 27.13 0.00 42.66 3.16
2771 6754 4.136796 GTGCATATGCTCCCTAATGAACA 58.863 43.478 27.13 0.26 42.66 3.18
2772 6755 3.503748 GGTGCATATGCTCCCTAATGAAC 59.496 47.826 30.27 15.84 46.01 3.18
2773 6756 3.754965 GGTGCATATGCTCCCTAATGAA 58.245 45.455 30.27 5.34 46.01 2.57
2774 6757 3.423539 GGTGCATATGCTCCCTAATGA 57.576 47.619 30.27 6.05 46.01 2.57
2782 6765 1.338579 GGCTCTAGGGTGCATATGCTC 60.339 57.143 27.13 23.05 42.66 4.26
2783 6766 0.689623 GGCTCTAGGGTGCATATGCT 59.310 55.000 27.13 10.62 42.66 3.79
2784 6767 0.397941 TGGCTCTAGGGTGCATATGC 59.602 55.000 21.09 21.09 42.50 3.14
2785 6768 2.936919 TTGGCTCTAGGGTGCATATG 57.063 50.000 0.00 0.00 34.07 1.78
2786 6769 3.555966 GTTTTGGCTCTAGGGTGCATAT 58.444 45.455 0.00 0.00 34.07 1.78
2787 6770 2.679639 CGTTTTGGCTCTAGGGTGCATA 60.680 50.000 0.00 0.00 34.07 3.14
2788 6771 1.839424 GTTTTGGCTCTAGGGTGCAT 58.161 50.000 0.00 0.00 34.07 3.96
2789 6772 0.605319 CGTTTTGGCTCTAGGGTGCA 60.605 55.000 0.00 0.00 34.07 4.57
2790 6773 1.305930 CCGTTTTGGCTCTAGGGTGC 61.306 60.000 0.00 0.00 0.00 5.01
2791 6774 2.854522 CCGTTTTGGCTCTAGGGTG 58.145 57.895 0.00 0.00 0.00 4.61
2809 6792 5.071091 ATGTACTTCATCTTCCGGAGGGC 62.071 52.174 14.38 0.00 39.83 5.19
2810 6793 2.700897 ATGTACTTCATCTTCCGGAGGG 59.299 50.000 14.38 6.95 39.83 4.30
2811 6794 4.408182 AATGTACTTCATCTTCCGGAGG 57.592 45.455 7.38 7.38 42.83 4.30
2812 6795 6.987386 AGATAATGTACTTCATCTTCCGGAG 58.013 40.000 3.34 0.00 35.48 4.63
2813 6796 6.778069 AGAGATAATGTACTTCATCTTCCGGA 59.222 38.462 0.00 0.00 35.48 5.14
2814 6797 6.987386 AGAGATAATGTACTTCATCTTCCGG 58.013 40.000 0.00 0.00 35.48 5.14
2815 6798 8.788806 ACTAGAGATAATGTACTTCATCTTCCG 58.211 37.037 0.00 0.00 35.48 4.30
2816 6799 9.906660 CACTAGAGATAATGTACTTCATCTTCC 57.093 37.037 0.00 0.00 35.48 3.46
2817 6800 9.906660 CCACTAGAGATAATGTACTTCATCTTC 57.093 37.037 0.00 0.00 35.48 2.87
2818 6801 8.364142 GCCACTAGAGATAATGTACTTCATCTT 58.636 37.037 0.00 0.00 35.48 2.40
2819 6802 7.728083 AGCCACTAGAGATAATGTACTTCATCT 59.272 37.037 0.00 0.00 35.48 2.90
2820 6803 7.891561 AGCCACTAGAGATAATGTACTTCATC 58.108 38.462 0.00 0.00 35.48 2.92
2821 6804 7.039363 GGAGCCACTAGAGATAATGTACTTCAT 60.039 40.741 0.00 0.00 38.57 2.57
2822 6805 6.265649 GGAGCCACTAGAGATAATGTACTTCA 59.734 42.308 0.00 0.00 0.00 3.02
2823 6806 6.265649 TGGAGCCACTAGAGATAATGTACTTC 59.734 42.308 0.00 0.00 0.00 3.01
2824 6807 6.136857 TGGAGCCACTAGAGATAATGTACTT 58.863 40.000 0.00 0.00 0.00 2.24
2825 6808 5.706447 TGGAGCCACTAGAGATAATGTACT 58.294 41.667 0.00 0.00 0.00 2.73
2826 6809 6.209589 TCATGGAGCCACTAGAGATAATGTAC 59.790 42.308 0.00 0.00 0.00 2.90
2827 6810 6.314917 TCATGGAGCCACTAGAGATAATGTA 58.685 40.000 0.00 0.00 0.00 2.29
2828 6811 5.150715 TCATGGAGCCACTAGAGATAATGT 58.849 41.667 0.00 0.00 0.00 2.71
2829 6812 5.735285 TCATGGAGCCACTAGAGATAATG 57.265 43.478 0.00 0.00 0.00 1.90
2830 6813 6.271857 ACATTCATGGAGCCACTAGAGATAAT 59.728 38.462 0.00 0.00 0.00 1.28
2831 6814 5.604231 ACATTCATGGAGCCACTAGAGATAA 59.396 40.000 0.00 0.00 0.00 1.75
2832 6815 5.150715 ACATTCATGGAGCCACTAGAGATA 58.849 41.667 0.00 0.00 0.00 1.98
2833 6816 3.972638 ACATTCATGGAGCCACTAGAGAT 59.027 43.478 0.00 0.00 0.00 2.75
2834 6817 3.378512 ACATTCATGGAGCCACTAGAGA 58.621 45.455 0.00 0.00 0.00 3.10
2835 6818 3.834489 ACATTCATGGAGCCACTAGAG 57.166 47.619 0.00 0.00 0.00 2.43
2836 6819 4.469586 TGTTACATTCATGGAGCCACTAGA 59.530 41.667 0.00 0.00 0.00 2.43
2837 6820 4.769688 TGTTACATTCATGGAGCCACTAG 58.230 43.478 0.00 0.00 0.00 2.57
2838 6821 4.835284 TGTTACATTCATGGAGCCACTA 57.165 40.909 0.00 0.00 0.00 2.74
2839 6822 3.719268 TGTTACATTCATGGAGCCACT 57.281 42.857 0.00 0.00 0.00 4.00
2840 6823 4.782019 TTTGTTACATTCATGGAGCCAC 57.218 40.909 0.00 0.00 0.00 5.01
2841 6824 5.999205 AATTTGTTACATTCATGGAGCCA 57.001 34.783 0.00 0.00 0.00 4.75
2842 6825 7.147976 GGATAATTTGTTACATTCATGGAGCC 58.852 38.462 0.00 0.00 0.00 4.70
2843 6826 7.715657 TGGATAATTTGTTACATTCATGGAGC 58.284 34.615 0.00 0.00 0.00 4.70
2846 6829 9.874205 ACTTTGGATAATTTGTTACATTCATGG 57.126 29.630 0.00 0.00 0.00 3.66
2867 6850 5.823209 TCATCAGCATACCAATCACTTTG 57.177 39.130 0.00 0.00 34.93 2.77
2868 6851 6.182627 TCTTCATCAGCATACCAATCACTTT 58.817 36.000 0.00 0.00 0.00 2.66
2869 6852 5.748402 TCTTCATCAGCATACCAATCACTT 58.252 37.500 0.00 0.00 0.00 3.16
2870 6853 5.363562 TCTTCATCAGCATACCAATCACT 57.636 39.130 0.00 0.00 0.00 3.41
2871 6854 4.514441 CCTCTTCATCAGCATACCAATCAC 59.486 45.833 0.00 0.00 0.00 3.06
2872 6855 4.711399 CCTCTTCATCAGCATACCAATCA 58.289 43.478 0.00 0.00 0.00 2.57
2873 6856 3.501445 GCCTCTTCATCAGCATACCAATC 59.499 47.826 0.00 0.00 0.00 2.67
2874 6857 3.117776 TGCCTCTTCATCAGCATACCAAT 60.118 43.478 0.00 0.00 0.00 3.16
2875 6858 2.239402 TGCCTCTTCATCAGCATACCAA 59.761 45.455 0.00 0.00 0.00 3.67
2876 6859 1.839354 TGCCTCTTCATCAGCATACCA 59.161 47.619 0.00 0.00 0.00 3.25
2877 6860 2.627515 TGCCTCTTCATCAGCATACC 57.372 50.000 0.00 0.00 0.00 2.73
2881 6864 2.105993 AGCATATGCCTCTTCATCAGCA 59.894 45.455 23.96 0.00 43.38 4.41
2882 6865 2.484651 CAGCATATGCCTCTTCATCAGC 59.515 50.000 23.96 0.00 43.38 4.26
2883 6866 4.004196 TCAGCATATGCCTCTTCATCAG 57.996 45.455 23.96 2.22 43.38 2.90
2884 6867 4.041198 TCATCAGCATATGCCTCTTCATCA 59.959 41.667 23.96 0.00 43.38 3.07
2885 6868 4.576879 TCATCAGCATATGCCTCTTCATC 58.423 43.478 23.96 0.00 43.38 2.92
2886 6869 4.635699 TCATCAGCATATGCCTCTTCAT 57.364 40.909 23.96 0.36 43.38 2.57
2887 6870 4.102054 TCTTCATCAGCATATGCCTCTTCA 59.898 41.667 23.96 4.20 43.38 3.02
2888 6871 4.639334 TCTTCATCAGCATATGCCTCTTC 58.361 43.478 23.96 0.00 43.38 2.87
2889 6872 4.347292 TCTCTTCATCAGCATATGCCTCTT 59.653 41.667 23.96 2.38 43.38 2.85
2890 6873 3.902467 TCTCTTCATCAGCATATGCCTCT 59.098 43.478 23.96 2.79 43.38 3.69
2891 6874 3.995705 GTCTCTTCATCAGCATATGCCTC 59.004 47.826 23.96 0.00 43.38 4.70
2892 6875 3.390311 TGTCTCTTCATCAGCATATGCCT 59.610 43.478 23.96 8.84 43.38 4.75
2893 6876 3.736720 TGTCTCTTCATCAGCATATGCC 58.263 45.455 23.96 6.56 43.38 4.40
2894 6877 8.890124 ATATATGTCTCTTCATCAGCATATGC 57.110 34.615 20.36 20.36 42.49 3.14
2919 6902 9.467796 TCTTTCAAGTTGATGTAGAGAGAGATA 57.532 33.333 6.36 0.00 0.00 1.98
2920 6903 8.359875 TCTTTCAAGTTGATGTAGAGAGAGAT 57.640 34.615 6.36 0.00 0.00 2.75
2921 6904 7.667635 TCTCTTTCAAGTTGATGTAGAGAGAGA 59.332 37.037 24.55 19.52 35.89 3.10
2922 6905 7.825681 TCTCTTTCAAGTTGATGTAGAGAGAG 58.174 38.462 24.55 18.31 35.89 3.20
2923 6906 7.767250 TCTCTTTCAAGTTGATGTAGAGAGA 57.233 36.000 24.55 21.72 35.89 3.10
2924 6907 8.824159 TTTCTCTTTCAAGTTGATGTAGAGAG 57.176 34.615 25.66 21.23 38.78 3.20
2925 6908 9.784531 ATTTTCTCTTTCAAGTTGATGTAGAGA 57.215 29.630 24.55 24.55 37.39 3.10
2962 6945 9.904198 TCCTATGACTTCACATGAATTAATGAA 57.096 29.630 9.95 0.00 33.01 2.57
2963 6946 9.904198 TTCCTATGACTTCACATGAATTAATGA 57.096 29.630 9.95 0.00 33.01 2.57
2966 6949 9.383519 GTCTTCCTATGACTTCACATGAATTAA 57.616 33.333 0.00 0.00 33.01 1.40
2967 6950 8.762645 AGTCTTCCTATGACTTCACATGAATTA 58.237 33.333 0.00 0.00 41.45 1.40
2968 6951 7.551974 CAGTCTTCCTATGACTTCACATGAATT 59.448 37.037 0.00 0.00 42.21 2.17
2969 6952 7.046652 CAGTCTTCCTATGACTTCACATGAAT 58.953 38.462 0.00 0.00 42.21 2.57
2970 6953 6.401394 CAGTCTTCCTATGACTTCACATGAA 58.599 40.000 0.00 0.00 42.21 2.57
2971 6954 5.105187 CCAGTCTTCCTATGACTTCACATGA 60.105 44.000 0.00 0.00 42.21 3.07
2972 6955 5.114780 CCAGTCTTCCTATGACTTCACATG 58.885 45.833 0.00 0.00 42.21 3.21
2973 6956 4.163078 CCCAGTCTTCCTATGACTTCACAT 59.837 45.833 0.00 0.00 42.21 3.21
2974 6957 3.515502 CCCAGTCTTCCTATGACTTCACA 59.484 47.826 0.00 0.00 42.21 3.58
2975 6958 3.680196 GCCCAGTCTTCCTATGACTTCAC 60.680 52.174 0.00 0.00 42.21 3.18
2976 6959 2.501723 GCCCAGTCTTCCTATGACTTCA 59.498 50.000 0.00 0.00 42.21 3.02
2977 6960 2.501723 TGCCCAGTCTTCCTATGACTTC 59.498 50.000 0.00 0.00 42.21 3.01
2978 6961 2.551270 TGCCCAGTCTTCCTATGACTT 58.449 47.619 0.00 0.00 42.21 3.01
2979 6962 2.254152 TGCCCAGTCTTCCTATGACT 57.746 50.000 0.00 0.00 44.62 3.41
2980 6963 2.486191 CCATGCCCAGTCTTCCTATGAC 60.486 54.545 0.00 0.00 34.88 3.06
2981 6964 1.770658 CCATGCCCAGTCTTCCTATGA 59.229 52.381 0.00 0.00 0.00 2.15
2982 6965 1.202855 CCCATGCCCAGTCTTCCTATG 60.203 57.143 0.00 0.00 0.00 2.23
2983 6966 1.143813 CCCATGCCCAGTCTTCCTAT 58.856 55.000 0.00 0.00 0.00 2.57
2984 6967 1.635817 GCCCATGCCCAGTCTTCCTA 61.636 60.000 0.00 0.00 0.00 2.94
2985 6968 2.988839 GCCCATGCCCAGTCTTCCT 61.989 63.158 0.00 0.00 0.00 3.36
2986 6969 2.440980 GCCCATGCCCAGTCTTCC 60.441 66.667 0.00 0.00 0.00 3.46
2996 6979 1.339644 ATGGAAACCATGGCCCATGC 61.340 55.000 24.77 4.36 43.39 4.06
2997 6980 0.754472 GATGGAAACCATGGCCCATG 59.246 55.000 28.36 17.16 45.26 3.66
2998 6981 0.339162 TGATGGAAACCATGGCCCAT 59.661 50.000 25.34 25.34 45.26 4.00
2999 6982 0.115944 TTGATGGAAACCATGGCCCA 59.884 50.000 19.51 19.51 45.26 5.36
3000 6983 0.536724 GTTGATGGAAACCATGGCCC 59.463 55.000 13.04 11.53 45.26 5.80
3001 6984 1.265236 TGTTGATGGAAACCATGGCC 58.735 50.000 13.04 5.71 45.26 5.36
3002 6985 2.036992 TGTTGTTGATGGAAACCATGGC 59.963 45.455 13.04 0.00 45.26 4.40
3003 6986 4.333913 TTGTTGTTGATGGAAACCATGG 57.666 40.909 11.19 11.19 45.26 3.66
3004 6987 6.660722 CATTTTGTTGTTGATGGAAACCATG 58.339 36.000 8.06 0.00 45.26 3.66
3006 6989 4.574013 GCATTTTGTTGTTGATGGAAACCA 59.426 37.500 0.00 0.00 38.19 3.67
3007 6990 4.815846 AGCATTTTGTTGTTGATGGAAACC 59.184 37.500 0.00 0.00 0.00 3.27
3008 6991 5.050159 GGAGCATTTTGTTGTTGATGGAAAC 60.050 40.000 0.00 0.00 0.00 2.78
3009 6992 5.055812 GGAGCATTTTGTTGTTGATGGAAA 58.944 37.500 0.00 0.00 0.00 3.13
3010 6993 4.100653 TGGAGCATTTTGTTGTTGATGGAA 59.899 37.500 0.00 0.00 0.00 3.53
3011 6994 3.640498 TGGAGCATTTTGTTGTTGATGGA 59.360 39.130 0.00 0.00 0.00 3.41
3012 6995 3.991773 CTGGAGCATTTTGTTGTTGATGG 59.008 43.478 0.00 0.00 0.00 3.51
3013 6996 4.682860 GTCTGGAGCATTTTGTTGTTGATG 59.317 41.667 0.00 0.00 0.00 3.07
3014 6997 4.341806 TGTCTGGAGCATTTTGTTGTTGAT 59.658 37.500 0.00 0.00 0.00 2.57
3015 6998 3.698539 TGTCTGGAGCATTTTGTTGTTGA 59.301 39.130 0.00 0.00 0.00 3.18
3016 6999 3.798337 GTGTCTGGAGCATTTTGTTGTTG 59.202 43.478 0.00 0.00 0.00 3.33
3017 7000 3.701040 AGTGTCTGGAGCATTTTGTTGTT 59.299 39.130 0.00 0.00 0.00 2.83
3018 7001 3.067180 CAGTGTCTGGAGCATTTTGTTGT 59.933 43.478 0.00 0.00 0.00 3.32
3019 7002 3.635331 CAGTGTCTGGAGCATTTTGTTG 58.365 45.455 0.00 0.00 0.00 3.33
3020 7003 3.996150 CAGTGTCTGGAGCATTTTGTT 57.004 42.857 0.00 0.00 0.00 2.83


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.