Multiple sequence alignment - TraesCS3B01G580300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G580300 chr3B 100.000 3340 0 0 1 3340 809454093 809450754 0.000000e+00 6168
1 TraesCS3B01G580300 chr3B 82.866 1926 254 33 1445 3340 809363309 809361430 0.000000e+00 1659
2 TraesCS3B01G580300 chr3B 82.546 1862 244 42 1515 3340 809233430 809235246 0.000000e+00 1563
3 TraesCS3B01G580300 chr3B 81.012 1364 223 21 1859 3209 809540452 809539112 0.000000e+00 1051
4 TraesCS3B01G580300 chr3B 100.000 381 0 0 3636 4016 809450458 809450078 0.000000e+00 704
5 TraesCS3B01G580300 chr3B 83.041 171 26 2 1147 1314 809541747 809541577 6.950000e-33 152
6 TraesCS3B01G580300 chr3B 80.423 189 29 6 1130 1314 809363626 809363442 1.950000e-28 137
7 TraesCS3B01G580300 chr3B 82.482 137 24 0 1178 1314 809233236 809233372 1.960000e-23 121
8 TraesCS3B01G580300 chr3D 89.795 1460 88 19 1887 3339 602241196 602239791 0.000000e+00 1814
9 TraesCS3B01G580300 chr3D 83.107 1918 249 37 1450 3338 602216318 602214447 0.000000e+00 1677
10 TraesCS3B01G580300 chr3D 81.034 1392 221 26 1859 3235 602275336 602273973 0.000000e+00 1068
11 TraesCS3B01G580300 chr3D 88.640 713 58 11 2 708 602250307 602249612 0.000000e+00 846
12 TraesCS3B01G580300 chr3D 89.660 648 39 11 1248 1892 602249042 602248420 0.000000e+00 800
13 TraesCS3B01G580300 chr3D 90.153 589 30 10 631 1208 602249612 602249041 0.000000e+00 741
14 TraesCS3B01G580300 chr3D 81.383 188 29 4 1130 1314 602217596 602217412 8.990000e-32 148
15 TraesCS3B01G580300 chr3A 82.955 1936 252 38 1436 3340 730887560 730889448 0.000000e+00 1676
16 TraesCS3B01G580300 chr3A 81.176 1360 214 26 1866 3209 732043537 732042204 0.000000e+00 1055
17 TraesCS3B01G580300 chr3A 75.576 999 208 30 1865 2855 730952132 730951162 1.020000e-125 460
18 TraesCS3B01G580300 chr3A 84.483 116 15 2 1193 1305 730952993 730952878 1.180000e-20 111
19 TraesCS3B01G580300 chr1B 79.849 397 45 20 3654 4016 644605910 644606305 1.430000e-64 257
20 TraesCS3B01G580300 chr1B 77.979 386 62 13 3636 3998 312614064 312613679 1.880000e-53 220
21 TraesCS3B01G580300 chr1D 79.221 385 58 12 3636 3998 218732192 218731808 8.620000e-62 248
22 TraesCS3B01G580300 chr1D 88.398 181 20 1 3656 3835 100902510 100902330 2.430000e-52 217
23 TraesCS3B01G580300 chr1D 87.363 182 20 3 3837 4016 100902298 100902118 5.260000e-49 206
24 TraesCS3B01G580300 chr7B 89.143 175 16 3 3833 4005 523104038 523103865 8.740000e-52 215
25 TraesCS3B01G580300 chrUn 87.912 182 19 3 3837 4016 92407108 92406928 1.130000e-50 211
26 TraesCS3B01G580300 chrUn 87.568 185 20 3 3834 4016 380756459 380756642 1.130000e-50 211
27 TraesCS3B01G580300 chrUn 83.251 203 26 5 3636 3835 358809696 358809499 3.190000e-41 180
28 TraesCS3B01G580300 chr4D 88.136 177 20 1 3654 3829 419336527 419336703 4.070000e-50 209
29 TraesCS3B01G580300 chr6B 87.097 186 20 4 3834 4016 671720041 671720225 1.460000e-49 207
30 TraesCS3B01G580300 chr6A 88.439 173 18 2 3846 4016 109797060 109796888 1.460000e-49 207
31 TraesCS3B01G580300 chr4A 87.363 182 21 2 3837 4016 169690291 169690472 1.460000e-49 207
32 TraesCS3B01G580300 chr4A 85.326 184 25 2 3653 3834 692086883 692086700 5.300000e-44 189
33 TraesCS3B01G580300 chr7D 87.363 182 20 3 3837 4016 207314426 207314246 5.260000e-49 206
34 TraesCS3B01G580300 chr7D 88.000 175 18 3 3663 3835 91778846 91779019 1.890000e-48 204
35 TraesCS3B01G580300 chr4B 86.857 175 22 1 3654 3827 599823522 599823696 1.140000e-45 195
36 TraesCS3B01G580300 chr5A 84.422 199 28 3 3638 3835 683123427 683123231 4.100000e-45 193


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G580300 chr3B 809450078 809454093 4015 True 3436.000000 6168 100.000000 1 4016 2 chr3B.!!$R2 4015
1 TraesCS3B01G580300 chr3B 809361430 809363626 2196 True 898.000000 1659 81.644500 1130 3340 2 chr3B.!!$R1 2210
2 TraesCS3B01G580300 chr3B 809233236 809235246 2010 False 842.000000 1563 82.514000 1178 3340 2 chr3B.!!$F1 2162
3 TraesCS3B01G580300 chr3B 809539112 809541747 2635 True 601.500000 1051 82.026500 1147 3209 2 chr3B.!!$R3 2062
4 TraesCS3B01G580300 chr3D 602239791 602241196 1405 True 1814.000000 1814 89.795000 1887 3339 1 chr3D.!!$R1 1452
5 TraesCS3B01G580300 chr3D 602273973 602275336 1363 True 1068.000000 1068 81.034000 1859 3235 1 chr3D.!!$R2 1376
6 TraesCS3B01G580300 chr3D 602214447 602217596 3149 True 912.500000 1677 82.245000 1130 3338 2 chr3D.!!$R3 2208
7 TraesCS3B01G580300 chr3D 602248420 602250307 1887 True 795.666667 846 89.484333 2 1892 3 chr3D.!!$R4 1890
8 TraesCS3B01G580300 chr3A 730887560 730889448 1888 False 1676.000000 1676 82.955000 1436 3340 1 chr3A.!!$F1 1904
9 TraesCS3B01G580300 chr3A 732042204 732043537 1333 True 1055.000000 1055 81.176000 1866 3209 1 chr3A.!!$R1 1343
10 TraesCS3B01G580300 chr3A 730951162 730952993 1831 True 285.500000 460 80.029500 1193 2855 2 chr3A.!!$R2 1662

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
421 426 0.038343 ATCAACATTGCACGCAACCC 60.038 50.0 6.60 0.0 38.88 4.11 F
962 1056 0.252284 TTCTCCCACCCACCTCTCTC 60.252 60.0 0.00 0.0 0.00 3.20 F
1680 3557 0.108615 GATACGTCACCAGCTGCAGT 60.109 55.0 16.64 0.0 0.00 4.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1402 2387 0.322187 CCAAAGTGGAAGGTACGGGG 60.322 60.000 0.00 0.00 40.96 5.73 R
2960 4893 1.000359 AGGCAATTTCCTTCCCCGG 60.000 57.895 0.00 0.00 30.82 5.73 R
3643 5592 0.104304 ACGACGAAGAAAGTGGCACT 59.896 50.000 15.88 15.88 0.00 4.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 6.624352 TCTTTTCCATCTCACAAAACTGAG 57.376 37.500 0.00 0.00 39.35 3.35
36 37 8.200120 TCCATCTCACAAAACTGAGTATATGAG 58.800 37.037 8.81 8.81 39.08 2.90
56 57 4.213906 TGAGAGTTCGTCATGTACAACGTA 59.786 41.667 17.17 7.49 39.78 3.57
66 67 7.008901 TCGTCATGTACAACGTATTTCTTCATC 59.991 37.037 17.17 0.00 39.78 2.92
86 87 0.252881 ATGGCCTGGAAGAGGAGACA 60.253 55.000 3.32 0.00 46.33 3.41
136 139 6.375455 AGACAAAAGTAAACCATATGAGGCAG 59.625 38.462 3.65 0.00 0.00 4.85
155 158 1.135083 AGCTCGTGTCTTTATGGTCCG 60.135 52.381 0.00 0.00 0.00 4.79
217 220 2.519013 ACTTCAAGCCATTGGGTTCTC 58.481 47.619 17.05 0.00 41.85 2.87
262 267 6.334237 TCTCTATTCTTCAGTAGAGGAGGGAT 59.666 42.308 8.94 0.00 42.58 3.85
274 279 9.061435 CAGTAGAGGAGGGATCATTAATTTTTC 57.939 37.037 0.00 0.00 0.00 2.29
279 284 7.413446 AGGAGGGATCATTAATTTTTCACTCA 58.587 34.615 17.04 0.00 38.36 3.41
335 340 7.557358 TCCTATGACAATGCAACTTATGTGAAT 59.443 33.333 0.00 0.00 0.00 2.57
351 356 9.334947 CTTATGTGAATCTATGTGTGGATTTCT 57.665 33.333 0.00 0.00 35.90 2.52
363 368 4.065088 TGTGGATTTCTCAACCTTCTTCG 58.935 43.478 0.00 0.00 0.00 3.79
379 384 2.299013 TCTTCGCTACACCAACTCATGT 59.701 45.455 0.00 0.00 0.00 3.21
381 386 1.067142 TCGCTACACCAACTCATGTCC 60.067 52.381 0.00 0.00 0.00 4.02
383 388 2.350522 GCTACACCAACTCATGTCCTG 58.649 52.381 0.00 0.00 0.00 3.86
406 411 7.148069 CCTGTCTGACAGTACATGTACTATCAA 60.148 40.741 34.65 25.65 45.54 2.57
412 417 7.277760 TGACAGTACATGTACTATCAACATTGC 59.722 37.037 34.04 14.22 43.97 3.56
420 425 2.095263 ACTATCAACATTGCACGCAACC 60.095 45.455 6.60 0.00 38.88 3.77
421 426 0.038343 ATCAACATTGCACGCAACCC 60.038 50.000 6.60 0.00 38.88 4.11
442 447 4.646040 CCCTATCAAGCATGATTTCACCAA 59.354 41.667 10.08 0.00 43.89 3.67
444 449 6.351202 CCCTATCAAGCATGATTTCACCAAAA 60.351 38.462 10.08 0.00 43.89 2.44
446 451 7.767198 CCTATCAAGCATGATTTCACCAAAAAT 59.233 33.333 10.08 0.00 43.89 1.82
449 454 8.481974 TCAAGCATGATTTCACCAAAAATATG 57.518 30.769 0.00 0.00 32.05 1.78
451 456 8.723311 CAAGCATGATTTCACCAAAAATATGTT 58.277 29.630 0.00 0.00 31.77 2.71
480 485 0.682532 TTTGTGCCCTTCAGTGTGCA 60.683 50.000 0.00 0.00 0.00 4.57
485 490 0.610232 GCCCTTCAGTGTGCAGGATT 60.610 55.000 7.19 0.00 0.00 3.01
489 494 2.619849 CCTTCAGTGTGCAGGATTGGAT 60.620 50.000 0.00 0.00 0.00 3.41
493 498 1.076024 AGTGTGCAGGATTGGATGGTT 59.924 47.619 0.00 0.00 0.00 3.67
515 520 7.608761 TGGTTGGTCTTTAGTATGTGTATTTCC 59.391 37.037 0.00 0.00 0.00 3.13
536 541 9.801873 ATTTCCAGTTATTTATTCACGAAATGG 57.198 29.630 0.00 0.00 36.76 3.16
540 545 6.692681 CAGTTATTTATTCACGAAATGGCCAG 59.307 38.462 13.05 0.00 0.00 4.85
545 550 3.410631 TTCACGAAATGGCCAGACTAA 57.589 42.857 13.05 0.00 0.00 2.24
562 567 6.422701 CCAGACTAAAACACGACATGACTTTA 59.577 38.462 0.00 0.00 0.00 1.85
565 570 9.701098 AGACTAAAACACGACATGACTTTAATA 57.299 29.630 0.00 0.00 0.00 0.98
659 743 5.899631 AAGTTTGAGTAGGGGTGTTAGAA 57.100 39.130 0.00 0.00 0.00 2.10
694 778 3.683822 CCGTGCATTTTTGCCAATTGTAT 59.316 39.130 4.43 0.00 0.00 2.29
700 784 7.331687 GTGCATTTTTGCCAATTGTATAAGAGT 59.668 33.333 4.43 0.00 0.00 3.24
752 839 7.715249 GTGTATTTCTACATATTTCCCTCAGCA 59.285 37.037 0.00 0.00 39.93 4.41
753 840 7.933577 TGTATTTCTACATATTTCCCTCAGCAG 59.066 37.037 0.00 0.00 32.88 4.24
762 849 8.227507 ACATATTTCCCTCAGCAGGTATATTTT 58.772 33.333 0.00 0.00 38.30 1.82
767 854 9.569122 TTTCCCTCAGCAGGTATATTTTTATAC 57.431 33.333 0.00 0.00 38.30 1.47
791 878 2.302445 TGGTCTTTGGCCCATGAAAATG 59.698 45.455 0.00 0.00 0.00 2.32
811 898 4.974645 TGTAAGTGGCATATCCTAAGGG 57.025 45.455 0.00 0.00 35.26 3.95
875 966 7.446625 GCCCTCATAGTTTCTGAATTGATGTAT 59.553 37.037 0.00 0.00 0.00 2.29
876 967 8.781196 CCCTCATAGTTTCTGAATTGATGTATG 58.219 37.037 0.00 0.00 0.00 2.39
877 968 9.334947 CCTCATAGTTTCTGAATTGATGTATGT 57.665 33.333 0.00 0.00 0.00 2.29
880 971 9.941664 CATAGTTTCTGAATTGATGTATGTTCC 57.058 33.333 0.00 0.00 0.00 3.62
881 972 7.076842 AGTTTCTGAATTGATGTATGTTCCG 57.923 36.000 0.00 0.00 0.00 4.30
882 973 6.655003 AGTTTCTGAATTGATGTATGTTCCGT 59.345 34.615 0.00 0.00 0.00 4.69
887 978 5.062934 TGAATTGATGTATGTTCCGTCGTTC 59.937 40.000 0.00 0.00 0.00 3.95
897 988 2.511600 CGTCGTTCCCCATCAGGC 60.512 66.667 0.00 0.00 0.00 4.85
956 1050 1.915983 GATCCTTCTCCCACCCACC 59.084 63.158 0.00 0.00 0.00 4.61
957 1051 0.621862 GATCCTTCTCCCACCCACCT 60.622 60.000 0.00 0.00 0.00 4.00
958 1052 0.621862 ATCCTTCTCCCACCCACCTC 60.622 60.000 0.00 0.00 0.00 3.85
959 1053 1.229658 CCTTCTCCCACCCACCTCT 60.230 63.158 0.00 0.00 0.00 3.69
960 1054 1.268283 CCTTCTCCCACCCACCTCTC 61.268 65.000 0.00 0.00 0.00 3.20
961 1055 0.252467 CTTCTCCCACCCACCTCTCT 60.252 60.000 0.00 0.00 0.00 3.10
962 1056 0.252284 TTCTCCCACCCACCTCTCTC 60.252 60.000 0.00 0.00 0.00 3.20
963 1057 1.149782 TCTCCCACCCACCTCTCTCT 61.150 60.000 0.00 0.00 0.00 3.10
983 1077 9.123902 TCTCTCTCTCTCTCTCTGATAATTTTG 57.876 37.037 0.00 0.00 0.00 2.44
988 1082 6.610830 TCTCTCTCTCTGATAATTTTGAGGCT 59.389 38.462 0.00 0.00 0.00 4.58
994 1088 7.114754 TCTCTGATAATTTTGAGGCTGTGATT 58.885 34.615 0.00 0.00 0.00 2.57
1052 1146 2.888414 GAGAGATGGTACTGGTAGAGGC 59.112 54.545 0.00 0.00 0.00 4.70
1097 1191 0.951558 CACCAGCACAACCTTGGTAC 59.048 55.000 0.00 0.00 43.11 3.34
1100 1194 0.951558 CAGCACAACCTTGGTACCAC 59.048 55.000 16.04 0.00 0.00 4.16
1104 1198 2.650322 CACAACCTTGGTACCACTGTT 58.350 47.619 16.04 17.44 0.00 3.16
1109 1203 1.202604 CCTTGGTACCACTGTTGTCGT 60.203 52.381 16.04 0.00 0.00 4.34
1124 1218 1.890041 TCGTTGTTGGCCCGTCAAG 60.890 57.895 0.00 0.00 0.00 3.02
1167 1261 2.112297 GTGGGAGACACGGGCAAA 59.888 61.111 0.00 0.00 40.85 3.68
1170 1264 1.303317 GGGAGACACGGGCAAACAT 60.303 57.895 0.00 0.00 0.00 2.71
1175 1272 1.514678 GACACGGGCAAACATGAGCA 61.515 55.000 0.00 0.00 0.00 4.26
1218 1359 4.629523 GTGGAACCGCCCGTGGAA 62.630 66.667 0.24 0.00 34.97 3.53
1219 1360 3.642503 TGGAACCGCCCGTGGAAT 61.643 61.111 0.24 0.00 34.97 3.01
1220 1361 2.822701 GGAACCGCCCGTGGAATC 60.823 66.667 0.24 0.00 0.00 2.52
1221 1362 2.046700 GAACCGCCCGTGGAATCA 60.047 61.111 0.24 0.00 0.00 2.57
1222 1363 2.359478 AACCGCCCGTGGAATCAC 60.359 61.111 0.24 0.00 40.36 3.06
1223 1364 3.185299 AACCGCCCGTGGAATCACA 62.185 57.895 0.24 0.00 43.79 3.58
1224 1365 2.819595 CCGCCCGTGGAATCACAG 60.820 66.667 0.00 0.00 43.79 3.66
1225 1366 2.819595 CGCCCGTGGAATCACAGG 60.820 66.667 0.00 0.00 43.79 4.00
1227 1368 2.671070 CCCGTGGAATCACAGGCT 59.329 61.111 0.00 0.00 43.79 4.58
1228 1369 1.746615 CCCGTGGAATCACAGGCTG 60.747 63.158 14.16 14.16 43.79 4.85
1229 1370 2.401766 CCGTGGAATCACAGGCTGC 61.402 63.158 15.89 0.00 43.79 5.25
1230 1371 2.743752 CGTGGAATCACAGGCTGCG 61.744 63.158 15.89 5.01 43.79 5.18
1231 1372 2.046023 TGGAATCACAGGCTGCGG 60.046 61.111 15.89 7.48 0.00 5.69
1232 1373 3.512516 GGAATCACAGGCTGCGGC 61.513 66.667 15.89 9.72 37.82 6.53
1233 1374 3.869272 GAATCACAGGCTGCGGCG 61.869 66.667 15.89 0.51 39.81 6.46
1306 1447 4.640690 AGAGGACCGCCCACCACT 62.641 66.667 0.00 0.00 37.41 4.00
1370 2355 9.979897 AGCACCACACCATATTCATATTATTAT 57.020 29.630 0.00 0.00 0.00 1.28
1402 2387 7.417612 ACATACGTTCCATTTTTATCATCTGC 58.582 34.615 0.00 0.00 0.00 4.26
1406 2391 3.221771 TCCATTTTTATCATCTGCCCCG 58.778 45.455 0.00 0.00 0.00 5.73
1430 2415 2.615493 CCTTCCACTTTGGTAGTCGCAT 60.615 50.000 0.00 0.00 39.03 4.73
1433 2418 2.094182 TCCACTTTGGTAGTCGCATCTC 60.094 50.000 0.00 0.00 39.03 2.75
1472 3349 5.887598 TCTAATGTGCTAGTGATTTGGCATT 59.112 36.000 0.00 0.00 37.05 3.56
1473 3350 3.853831 TGTGCTAGTGATTTGGCATTG 57.146 42.857 0.00 0.00 37.05 2.82
1474 3351 3.156293 TGTGCTAGTGATTTGGCATTGT 58.844 40.909 0.00 0.00 37.05 2.71
1678 3555 1.218047 GGATACGTCACCAGCTGCA 59.782 57.895 8.66 0.00 0.00 4.41
1680 3557 0.108615 GATACGTCACCAGCTGCAGT 60.109 55.000 16.64 0.00 0.00 4.40
1726 3603 7.524038 GCCTACTAGTTGGGTCAGTATATCTTG 60.524 44.444 22.48 0.00 0.00 3.02
1730 3607 6.620877 AGTTGGGTCAGTATATCTTGTTCA 57.379 37.500 0.00 0.00 0.00 3.18
1731 3608 7.200434 AGTTGGGTCAGTATATCTTGTTCAT 57.800 36.000 0.00 0.00 0.00 2.57
1733 3610 8.109634 AGTTGGGTCAGTATATCTTGTTCATTT 58.890 33.333 0.00 0.00 0.00 2.32
1734 3611 7.864108 TGGGTCAGTATATCTTGTTCATTTG 57.136 36.000 0.00 0.00 0.00 2.32
1735 3612 6.318648 TGGGTCAGTATATCTTGTTCATTTGC 59.681 38.462 0.00 0.00 0.00 3.68
1736 3613 6.318648 GGGTCAGTATATCTTGTTCATTTGCA 59.681 38.462 0.00 0.00 0.00 4.08
1739 3616 6.816140 TCAGTATATCTTGTTCATTTGCACGA 59.184 34.615 0.00 0.00 0.00 4.35
1742 3619 1.266718 TCTTGTTCATTTGCACGAGGC 59.733 47.619 0.00 0.00 45.13 4.70
1743 3620 1.267806 CTTGTTCATTTGCACGAGGCT 59.732 47.619 0.00 0.00 45.15 4.58
1744 3621 1.317613 TGTTCATTTGCACGAGGCTT 58.682 45.000 0.00 0.00 45.15 4.35
1745 3622 1.001487 TGTTCATTTGCACGAGGCTTG 60.001 47.619 0.00 0.00 45.15 4.01
1746 3623 1.001378 GTTCATTTGCACGAGGCTTGT 60.001 47.619 0.18 0.18 45.15 3.16
1747 3624 1.317613 TCATTTGCACGAGGCTTGTT 58.682 45.000 4.15 0.00 45.15 2.83
1748 3625 1.266718 TCATTTGCACGAGGCTTGTTC 59.733 47.619 4.15 0.18 45.15 3.18
1749 3626 1.001487 CATTTGCACGAGGCTTGTTCA 60.001 47.619 4.15 3.47 45.15 3.18
1750 3627 0.380378 TTTGCACGAGGCTTGTTCAC 59.620 50.000 6.73 0.00 45.15 3.18
1751 3628 1.771073 TTGCACGAGGCTTGTTCACG 61.771 55.000 6.73 0.00 45.15 4.35
1752 3629 1.954146 GCACGAGGCTTGTTCACGA 60.954 57.895 4.15 0.00 40.25 4.35
1753 3630 1.291877 GCACGAGGCTTGTTCACGAT 61.292 55.000 4.15 0.00 40.25 3.73
1805 3682 8.049655 TCATGTGTATTTTGGATTCATTTCGA 57.950 30.769 0.00 0.00 0.00 3.71
1810 3687 6.806249 TGTATTTTGGATTCATTTCGACAAGC 59.194 34.615 0.00 0.00 0.00 4.01
1893 3811 4.035675 GGAGCTTTTTCGTGATGGGATTAG 59.964 45.833 0.00 0.00 0.00 1.73
1987 3907 5.677319 TTGATACTCTTGTTTCCGGAGAT 57.323 39.130 3.34 0.00 0.00 2.75
2151 4083 4.742417 TGGTTCATGTTGACACACTTTTG 58.258 39.130 0.00 0.00 35.03 2.44
2162 4094 4.450419 TGACACACTTTTGTTTGCTTTTGG 59.550 37.500 0.00 0.00 33.69 3.28
2173 4105 4.464597 TGTTTGCTTTTGGTTCTTGTAGGT 59.535 37.500 0.00 0.00 0.00 3.08
2360 4292 9.578576 GGGATATGTAATTGCCATATATGTCAT 57.421 33.333 11.73 6.94 36.02 3.06
2598 4531 1.003580 AGAGACGCAACAATCATGGGT 59.996 47.619 0.00 0.00 45.32 4.51
2649 4582 7.458397 TCTTGTGGTACAACCTGAATAAGAAT 58.542 34.615 0.00 0.00 44.16 2.40
2756 4689 6.198591 GTGAGTGCATACCTAAACGATCTAAC 59.801 42.308 0.00 0.00 0.00 2.34
2862 4795 2.198827 TGGTAATGCCAAGTGTGAGG 57.801 50.000 0.00 0.00 45.94 3.86
2952 4885 0.871722 TTAGCATGTCGTGTGTTGCC 59.128 50.000 0.00 0.00 35.71 4.52
2953 4886 1.288419 TAGCATGTCGTGTGTTGCCG 61.288 55.000 0.00 0.00 35.71 5.69
2960 4893 2.594962 CGTGTGTTGCCGAGGACAC 61.595 63.158 7.04 7.04 44.84 3.67
2969 4902 3.771160 CGAGGACACCGGGGAAGG 61.771 72.222 12.96 0.00 37.30 3.46
3005 4938 2.241160 TGTGCATGCCAAGAAGTCAAT 58.759 42.857 16.68 0.00 0.00 2.57
3033 4966 2.044123 AAGATCGTTGGAGGATTGGC 57.956 50.000 0.00 0.00 0.00 4.52
3036 4969 0.462047 ATCGTTGGAGGATTGGCGAC 60.462 55.000 0.00 0.00 0.00 5.19
3125 5060 5.070313 ACCACAATGCTTGTTGTTATCCTTT 59.930 36.000 0.00 0.00 43.23 3.11
3126 5061 5.990996 CCACAATGCTTGTTGTTATCCTTTT 59.009 36.000 0.00 0.00 43.23 2.27
3212 5155 2.270275 TTGGTGTTTTCTGTTGTGCG 57.730 45.000 0.00 0.00 0.00 5.34
3214 5157 2.357075 TGGTGTTTTCTGTTGTGCGTA 58.643 42.857 0.00 0.00 0.00 4.42
3215 5158 2.747989 TGGTGTTTTCTGTTGTGCGTAA 59.252 40.909 0.00 0.00 0.00 3.18
3225 5168 5.688823 TCTGTTGTGCGTAATCTGAAATTG 58.311 37.500 0.00 0.00 0.00 2.32
3266 5215 1.070134 CTCCAAAGGAACCACACGAGA 59.930 52.381 0.00 0.00 0.00 4.04
3276 5225 5.245526 AGGAACCACACGAGATAGTAAGTTT 59.754 40.000 0.00 0.00 0.00 2.66
3281 5230 5.929992 CCACACGAGATAGTAAGTTTTTGGA 59.070 40.000 0.00 0.00 0.00 3.53
3283 5232 6.645415 CACACGAGATAGTAAGTTTTTGGACT 59.355 38.462 0.00 0.00 0.00 3.85
3323 5272 3.570125 GCAGCTAGAACCAAGTTTTCCTT 59.430 43.478 0.00 0.00 0.00 3.36
3655 5604 3.845781 TCTTCAAGAGTGCCACTTTCT 57.154 42.857 0.00 0.00 0.00 2.52
3656 5605 4.156455 TCTTCAAGAGTGCCACTTTCTT 57.844 40.909 0.00 0.00 0.00 2.52
3657 5606 4.130118 TCTTCAAGAGTGCCACTTTCTTC 58.870 43.478 0.00 0.00 0.00 2.87
3658 5607 2.483876 TCAAGAGTGCCACTTTCTTCG 58.516 47.619 0.00 0.00 0.00 3.79
3659 5608 2.158957 TCAAGAGTGCCACTTTCTTCGT 60.159 45.455 0.00 0.00 0.00 3.85
3660 5609 2.156343 AGAGTGCCACTTTCTTCGTC 57.844 50.000 0.00 0.00 0.00 4.20
3661 5610 0.784778 GAGTGCCACTTTCTTCGTCG 59.215 55.000 0.00 0.00 0.00 5.12
3662 5611 0.104304 AGTGCCACTTTCTTCGTCGT 59.896 50.000 0.00 0.00 0.00 4.34
3663 5612 0.507358 GTGCCACTTTCTTCGTCGTC 59.493 55.000 0.00 0.00 0.00 4.20
3664 5613 0.937699 TGCCACTTTCTTCGTCGTCG 60.938 55.000 0.00 0.00 38.55 5.12
3665 5614 0.938168 GCCACTTTCTTCGTCGTCGT 60.938 55.000 1.33 0.00 38.33 4.34
3666 5615 1.050767 CCACTTTCTTCGTCGTCGTC 58.949 55.000 1.33 0.00 38.33 4.20
3667 5616 1.334779 CCACTTTCTTCGTCGTCGTCT 60.335 52.381 1.33 0.00 38.33 4.18
3668 5617 2.096069 CCACTTTCTTCGTCGTCGTCTA 60.096 50.000 1.33 0.00 38.33 2.59
3669 5618 3.425892 CCACTTTCTTCGTCGTCGTCTAT 60.426 47.826 1.33 0.00 38.33 1.98
3670 5619 4.156915 CACTTTCTTCGTCGTCGTCTATT 58.843 43.478 1.33 0.00 38.33 1.73
3671 5620 4.029198 CACTTTCTTCGTCGTCGTCTATTG 59.971 45.833 1.33 0.00 38.33 1.90
3672 5621 4.083643 ACTTTCTTCGTCGTCGTCTATTGA 60.084 41.667 1.33 0.00 38.33 2.57
3673 5622 3.653256 TCTTCGTCGTCGTCTATTGAG 57.347 47.619 1.33 0.00 38.33 3.02
3674 5623 2.102633 CTTCGTCGTCGTCTATTGAGC 58.897 52.381 1.33 0.00 38.33 4.26
3675 5624 1.081094 TCGTCGTCGTCTATTGAGCA 58.919 50.000 1.33 0.00 38.33 4.26
3676 5625 1.669265 TCGTCGTCGTCTATTGAGCAT 59.331 47.619 1.33 0.00 38.33 3.79
3677 5626 2.037649 CGTCGTCGTCTATTGAGCATC 58.962 52.381 0.00 0.00 0.00 3.91
3678 5627 2.037649 GTCGTCGTCTATTGAGCATCG 58.962 52.381 0.00 0.00 38.61 3.84
3679 5628 1.669265 TCGTCGTCTATTGAGCATCGT 59.331 47.619 0.00 0.00 38.61 3.73
3680 5629 2.867975 TCGTCGTCTATTGAGCATCGTA 59.132 45.455 0.00 0.00 38.61 3.43
3681 5630 3.497262 TCGTCGTCTATTGAGCATCGTAT 59.503 43.478 0.00 0.00 38.61 3.06
3682 5631 4.024302 TCGTCGTCTATTGAGCATCGTATT 60.024 41.667 0.00 0.00 38.61 1.89
3683 5632 4.675565 CGTCGTCTATTGAGCATCGTATTT 59.324 41.667 0.00 0.00 38.61 1.40
3684 5633 5.173312 CGTCGTCTATTGAGCATCGTATTTT 59.827 40.000 0.00 0.00 38.61 1.82
3685 5634 6.347881 GTCGTCTATTGAGCATCGTATTTTG 58.652 40.000 0.00 0.00 38.61 2.44
3686 5635 6.019801 GTCGTCTATTGAGCATCGTATTTTGT 60.020 38.462 0.00 0.00 38.61 2.83
3687 5636 6.019881 TCGTCTATTGAGCATCGTATTTTGTG 60.020 38.462 0.00 0.00 38.61 3.33
3688 5637 6.019881 CGTCTATTGAGCATCGTATTTTGTGA 60.020 38.462 0.00 0.00 38.61 3.58
3689 5638 7.340699 GTCTATTGAGCATCGTATTTTGTGAG 58.659 38.462 0.00 0.00 38.61 3.51
3690 5639 7.222805 GTCTATTGAGCATCGTATTTTGTGAGA 59.777 37.037 0.00 0.00 38.61 3.27
3691 5640 6.741992 ATTGAGCATCGTATTTTGTGAGAA 57.258 33.333 0.00 0.00 38.61 2.87
3692 5641 6.741992 TTGAGCATCGTATTTTGTGAGAAT 57.258 33.333 0.00 0.00 38.61 2.40
3693 5642 7.841915 TTGAGCATCGTATTTTGTGAGAATA 57.158 32.000 0.00 0.00 38.61 1.75
3694 5643 7.841915 TGAGCATCGTATTTTGTGAGAATAA 57.158 32.000 0.00 0.00 38.61 1.40
3695 5644 8.262715 TGAGCATCGTATTTTGTGAGAATAAA 57.737 30.769 0.00 0.00 38.61 1.40
3696 5645 8.892723 TGAGCATCGTATTTTGTGAGAATAAAT 58.107 29.630 0.00 0.00 38.61 1.40
3697 5646 9.722056 GAGCATCGTATTTTGTGAGAATAAATT 57.278 29.630 0.00 0.00 0.00 1.82
3716 5665 9.573133 AATAAATTTACTCTCATTCTTTTGGCG 57.427 29.630 0.00 0.00 0.00 5.69
3717 5666 5.567138 ATTTACTCTCATTCTTTTGGCGG 57.433 39.130 0.00 0.00 0.00 6.13
3718 5667 2.568623 ACTCTCATTCTTTTGGCGGT 57.431 45.000 0.00 0.00 0.00 5.68
3719 5668 2.154462 ACTCTCATTCTTTTGGCGGTG 58.846 47.619 0.00 0.00 0.00 4.94
3720 5669 0.881118 TCTCATTCTTTTGGCGGTGC 59.119 50.000 0.00 0.00 0.00 5.01
3731 5680 4.312052 GCGGTGCCATGAGGTTAA 57.688 55.556 0.00 0.00 37.19 2.01
3732 5681 2.562125 GCGGTGCCATGAGGTTAAA 58.438 52.632 0.00 0.00 37.19 1.52
3733 5682 0.451783 GCGGTGCCATGAGGTTAAAG 59.548 55.000 0.00 0.00 37.19 1.85
3734 5683 1.948611 GCGGTGCCATGAGGTTAAAGA 60.949 52.381 0.00 0.00 37.19 2.52
3735 5684 2.009774 CGGTGCCATGAGGTTAAAGAG 58.990 52.381 0.00 0.00 37.19 2.85
3736 5685 2.615493 CGGTGCCATGAGGTTAAAGAGT 60.615 50.000 0.00 0.00 37.19 3.24
3737 5686 3.421844 GGTGCCATGAGGTTAAAGAGTT 58.578 45.455 0.00 0.00 37.19 3.01
3738 5687 3.826729 GGTGCCATGAGGTTAAAGAGTTT 59.173 43.478 0.00 0.00 37.19 2.66
3739 5688 4.280929 GGTGCCATGAGGTTAAAGAGTTTT 59.719 41.667 0.00 0.00 37.19 2.43
3740 5689 5.221441 GGTGCCATGAGGTTAAAGAGTTTTT 60.221 40.000 0.00 0.00 37.19 1.94
3741 5690 6.015772 GGTGCCATGAGGTTAAAGAGTTTTTA 60.016 38.462 0.00 0.00 37.19 1.52
3742 5691 7.084486 GTGCCATGAGGTTAAAGAGTTTTTAG 58.916 38.462 0.00 0.00 37.19 1.85
3743 5692 6.775629 TGCCATGAGGTTAAAGAGTTTTTAGT 59.224 34.615 0.00 0.00 37.19 2.24
3744 5693 7.040686 TGCCATGAGGTTAAAGAGTTTTTAGTC 60.041 37.037 0.00 0.00 37.19 2.59
3745 5694 7.575155 GCCATGAGGTTAAAGAGTTTTTAGTCC 60.575 40.741 0.00 3.09 37.19 3.85
3746 5695 7.665974 CCATGAGGTTAAAGAGTTTTTAGTCCT 59.334 37.037 0.00 9.90 0.00 3.85
3747 5696 8.722394 CATGAGGTTAAAGAGTTTTTAGTCCTC 58.278 37.037 20.25 20.25 37.35 3.71
3748 5697 6.927381 TGAGGTTAAAGAGTTTTTAGTCCTCG 59.073 38.462 20.88 0.00 38.33 4.63
3749 5698 5.699915 AGGTTAAAGAGTTTTTAGTCCTCGC 59.300 40.000 6.32 0.00 0.00 5.03
3750 5699 5.467735 GGTTAAAGAGTTTTTAGTCCTCGCA 59.532 40.000 0.00 0.00 0.00 5.10
3751 5700 6.017687 GGTTAAAGAGTTTTTAGTCCTCGCAA 60.018 38.462 0.00 0.00 0.00 4.85
3752 5701 7.412063 GTTAAAGAGTTTTTAGTCCTCGCAAA 58.588 34.615 0.00 0.00 0.00 3.68
3753 5702 6.635030 AAAGAGTTTTTAGTCCTCGCAAAT 57.365 33.333 0.00 0.00 0.00 2.32
3754 5703 5.864628 AGAGTTTTTAGTCCTCGCAAATC 57.135 39.130 0.00 0.00 0.00 2.17
3755 5704 4.695928 AGAGTTTTTAGTCCTCGCAAATCC 59.304 41.667 0.00 0.00 0.00 3.01
3756 5705 3.435671 AGTTTTTAGTCCTCGCAAATCCG 59.564 43.478 0.00 0.00 0.00 4.18
3757 5706 3.322211 TTTTAGTCCTCGCAAATCCGA 57.678 42.857 0.00 0.00 35.68 4.55
3758 5707 3.536956 TTTAGTCCTCGCAAATCCGAT 57.463 42.857 0.00 0.00 36.54 4.18
3759 5708 3.536956 TTAGTCCTCGCAAATCCGATT 57.463 42.857 0.00 0.00 36.54 3.34
3760 5709 4.659111 TTAGTCCTCGCAAATCCGATTA 57.341 40.909 0.00 0.00 36.54 1.75
3761 5710 3.753294 AGTCCTCGCAAATCCGATTAT 57.247 42.857 0.00 0.00 36.54 1.28
3762 5711 4.073293 AGTCCTCGCAAATCCGATTATT 57.927 40.909 0.00 0.00 36.54 1.40
3763 5712 4.058817 AGTCCTCGCAAATCCGATTATTC 58.941 43.478 0.00 0.00 36.54 1.75
3764 5713 3.807622 GTCCTCGCAAATCCGATTATTCA 59.192 43.478 0.00 0.00 36.54 2.57
3765 5714 4.058124 TCCTCGCAAATCCGATTATTCAG 58.942 43.478 0.00 0.00 36.54 3.02
3766 5715 4.058124 CCTCGCAAATCCGATTATTCAGA 58.942 43.478 0.00 0.00 36.54 3.27
3767 5716 4.692625 CCTCGCAAATCCGATTATTCAGAT 59.307 41.667 0.00 0.00 36.54 2.90
3768 5717 5.163913 CCTCGCAAATCCGATTATTCAGATC 60.164 44.000 0.00 0.00 36.54 2.75
3769 5718 5.541845 TCGCAAATCCGATTATTCAGATCT 58.458 37.500 0.00 0.00 31.36 2.75
3770 5719 5.406477 TCGCAAATCCGATTATTCAGATCTG 59.594 40.000 17.07 17.07 31.36 2.90
3771 5720 5.406477 CGCAAATCCGATTATTCAGATCTGA 59.594 40.000 21.67 21.67 37.91 3.27
3772 5721 6.091849 CGCAAATCCGATTATTCAGATCTGAT 59.908 38.462 25.64 17.12 39.64 2.90
3773 5722 7.276438 CGCAAATCCGATTATTCAGATCTGATA 59.724 37.037 25.64 16.32 39.64 2.15
3774 5723 8.939929 GCAAATCCGATTATTCAGATCTGATAA 58.060 33.333 25.64 22.33 39.64 1.75
3785 5734 8.970859 ATTCAGATCTGATAAGTTTAGGTTGG 57.029 34.615 25.64 0.00 39.64 3.77
3786 5735 7.496346 TCAGATCTGATAAGTTTAGGTTGGT 57.504 36.000 21.67 0.00 34.14 3.67
3787 5736 7.331026 TCAGATCTGATAAGTTTAGGTTGGTG 58.669 38.462 21.67 0.00 34.14 4.17
3788 5737 7.038302 TCAGATCTGATAAGTTTAGGTTGGTGT 60.038 37.037 21.67 0.00 34.14 4.16
3789 5738 7.065085 CAGATCTGATAAGTTTAGGTTGGTGTG 59.935 40.741 18.34 0.00 0.00 3.82
3790 5739 6.182507 TCTGATAAGTTTAGGTTGGTGTGT 57.817 37.500 0.00 0.00 0.00 3.72
3791 5740 6.228258 TCTGATAAGTTTAGGTTGGTGTGTC 58.772 40.000 0.00 0.00 0.00 3.67
3792 5741 5.931294 TGATAAGTTTAGGTTGGTGTGTCA 58.069 37.500 0.00 0.00 0.00 3.58
3793 5742 6.358178 TGATAAGTTTAGGTTGGTGTGTCAA 58.642 36.000 0.00 0.00 0.00 3.18
3794 5743 6.485313 TGATAAGTTTAGGTTGGTGTGTCAAG 59.515 38.462 0.00 0.00 0.00 3.02
3795 5744 2.949644 AGTTTAGGTTGGTGTGTCAAGC 59.050 45.455 0.00 0.00 43.20 4.01
3796 5745 1.975660 TTAGGTTGGTGTGTCAAGCC 58.024 50.000 0.00 0.00 43.71 4.35
3797 5746 0.840617 TAGGTTGGTGTGTCAAGCCA 59.159 50.000 0.00 0.00 43.71 4.75
3798 5747 0.185901 AGGTTGGTGTGTCAAGCCAT 59.814 50.000 0.00 0.00 43.71 4.40
3799 5748 1.039856 GGTTGGTGTGTCAAGCCATT 58.960 50.000 0.00 0.00 38.70 3.16
3800 5749 1.412343 GGTTGGTGTGTCAAGCCATTT 59.588 47.619 0.00 0.00 38.70 2.32
3801 5750 2.158971 GGTTGGTGTGTCAAGCCATTTT 60.159 45.455 0.00 0.00 38.70 1.82
3802 5751 3.530535 GTTGGTGTGTCAAGCCATTTTT 58.469 40.909 0.00 0.00 31.71 1.94
3803 5752 3.176552 TGGTGTGTCAAGCCATTTTTG 57.823 42.857 0.00 0.00 0.00 2.44
3804 5753 2.499289 TGGTGTGTCAAGCCATTTTTGT 59.501 40.909 0.00 0.00 0.00 2.83
3805 5754 2.865551 GGTGTGTCAAGCCATTTTTGTG 59.134 45.455 0.00 0.00 0.00 3.33
3806 5755 2.865551 GTGTGTCAAGCCATTTTTGTGG 59.134 45.455 0.00 0.00 42.35 4.17
3807 5756 2.499289 TGTGTCAAGCCATTTTTGTGGT 59.501 40.909 0.00 0.00 41.47 4.16
3808 5757 3.055530 TGTGTCAAGCCATTTTTGTGGTT 60.056 39.130 0.00 0.00 41.47 3.67
3809 5758 3.938334 GTGTCAAGCCATTTTTGTGGTTT 59.062 39.130 0.00 0.00 42.51 3.27
3815 5764 5.294734 AGCCATTTTTGTGGTTTGATTCT 57.705 34.783 0.00 0.00 41.47 2.40
3816 5765 5.683681 AGCCATTTTTGTGGTTTGATTCTT 58.316 33.333 0.00 0.00 41.47 2.52
3817 5766 6.121590 AGCCATTTTTGTGGTTTGATTCTTT 58.878 32.000 0.00 0.00 41.47 2.52
3818 5767 6.038492 AGCCATTTTTGTGGTTTGATTCTTTG 59.962 34.615 0.00 0.00 41.47 2.77
3819 5768 6.183360 GCCATTTTTGTGGTTTGATTCTTTGT 60.183 34.615 0.00 0.00 41.47 2.83
3820 5769 7.188157 CCATTTTTGTGGTTTGATTCTTTGTG 58.812 34.615 0.00 0.00 34.46 3.33
3821 5770 7.065563 CCATTTTTGTGGTTTGATTCTTTGTGA 59.934 33.333 0.00 0.00 34.46 3.58
3822 5771 7.969536 TTTTTGTGGTTTGATTCTTTGTGAA 57.030 28.000 0.00 0.00 39.24 3.18
3823 5772 7.593875 TTTTGTGGTTTGATTCTTTGTGAAG 57.406 32.000 0.00 0.00 38.18 3.02
3824 5773 5.913137 TGTGGTTTGATTCTTTGTGAAGT 57.087 34.783 0.00 0.00 38.18 3.01
3825 5774 6.279513 TGTGGTTTGATTCTTTGTGAAGTT 57.720 33.333 0.00 0.00 38.18 2.66
3826 5775 6.098679 TGTGGTTTGATTCTTTGTGAAGTTG 58.901 36.000 0.00 0.00 38.18 3.16
3827 5776 6.071672 TGTGGTTTGATTCTTTGTGAAGTTGA 60.072 34.615 0.00 0.00 38.18 3.18
3828 5777 6.811170 GTGGTTTGATTCTTTGTGAAGTTGAA 59.189 34.615 0.00 0.00 38.18 2.69
3829 5778 7.330700 GTGGTTTGATTCTTTGTGAAGTTGAAA 59.669 33.333 0.00 0.00 38.18 2.69
3830 5779 8.040132 TGGTTTGATTCTTTGTGAAGTTGAAAT 58.960 29.630 0.00 0.00 38.18 2.17
3831 5780 8.542953 GGTTTGATTCTTTGTGAAGTTGAAATC 58.457 33.333 0.00 0.00 38.18 2.17
3832 5781 9.305925 GTTTGATTCTTTGTGAAGTTGAAATCT 57.694 29.630 0.00 0.00 38.18 2.40
3833 5782 9.874205 TTTGATTCTTTGTGAAGTTGAAATCTT 57.126 25.926 0.00 0.00 38.18 2.40
3834 5783 9.874205 TTGATTCTTTGTGAAGTTGAAATCTTT 57.126 25.926 0.00 0.00 38.18 2.52
3835 5784 9.304731 TGATTCTTTGTGAAGTTGAAATCTTTG 57.695 29.630 0.00 0.00 38.18 2.77
3836 5785 8.652810 ATTCTTTGTGAAGTTGAAATCTTTGG 57.347 30.769 0.00 0.00 38.18 3.28
3837 5786 7.403312 TCTTTGTGAAGTTGAAATCTTTGGA 57.597 32.000 0.00 0.00 34.41 3.53
3838 5787 7.257722 TCTTTGTGAAGTTGAAATCTTTGGAC 58.742 34.615 0.00 0.00 34.41 4.02
3839 5788 5.168526 TGTGAAGTTGAAATCTTTGGACG 57.831 39.130 0.00 0.00 0.00 4.79
3840 5789 4.638421 TGTGAAGTTGAAATCTTTGGACGT 59.362 37.500 0.00 0.00 0.00 4.34
3841 5790 5.205565 GTGAAGTTGAAATCTTTGGACGTC 58.794 41.667 7.13 7.13 0.00 4.34
3842 5791 4.274950 TGAAGTTGAAATCTTTGGACGTCC 59.725 41.667 28.17 28.17 0.00 4.79
3843 5792 3.815809 AGTTGAAATCTTTGGACGTCCA 58.184 40.909 33.23 33.23 45.94 4.02
3854 5803 1.616865 TGGACGTCCAACACTTCTAGG 59.383 52.381 34.60 0.00 44.35 3.02
3855 5804 1.067071 GGACGTCCAACACTTCTAGGG 60.067 57.143 29.75 0.00 35.64 3.53
3856 5805 0.974383 ACGTCCAACACTTCTAGGGG 59.026 55.000 0.00 0.00 0.00 4.79
3857 5806 1.263356 CGTCCAACACTTCTAGGGGA 58.737 55.000 0.00 0.00 0.00 4.81
3858 5807 1.831736 CGTCCAACACTTCTAGGGGAT 59.168 52.381 0.00 0.00 0.00 3.85
3859 5808 2.159085 CGTCCAACACTTCTAGGGGATC 60.159 54.545 0.00 0.00 0.00 3.36
3860 5809 2.838202 GTCCAACACTTCTAGGGGATCA 59.162 50.000 0.00 0.00 0.00 2.92
3861 5810 3.456277 GTCCAACACTTCTAGGGGATCAT 59.544 47.826 0.00 0.00 0.00 2.45
3862 5811 3.711704 TCCAACACTTCTAGGGGATCATC 59.288 47.826 0.00 0.00 0.00 2.92
3863 5812 3.181450 CCAACACTTCTAGGGGATCATCC 60.181 52.174 0.00 0.00 35.23 3.51
3872 5821 3.498071 GGATCATCCCCGGCCCAA 61.498 66.667 0.00 0.00 0.00 4.12
3873 5822 2.113986 GATCATCCCCGGCCCAAG 59.886 66.667 0.00 0.00 0.00 3.61
3874 5823 2.696125 ATCATCCCCGGCCCAAGT 60.696 61.111 0.00 0.00 0.00 3.16
3875 5824 1.385347 ATCATCCCCGGCCCAAGTA 60.385 57.895 0.00 0.00 0.00 2.24
3876 5825 1.705997 ATCATCCCCGGCCCAAGTAC 61.706 60.000 0.00 0.00 0.00 2.73
3877 5826 3.476419 ATCCCCGGCCCAAGTACG 61.476 66.667 0.00 0.00 0.00 3.67
3879 5828 4.024545 CCCCGGCCCAAGTACGTT 62.025 66.667 0.00 0.00 0.00 3.99
3880 5829 2.435410 CCCGGCCCAAGTACGTTC 60.435 66.667 0.00 0.00 0.00 3.95
3881 5830 2.344500 CCGGCCCAAGTACGTTCA 59.656 61.111 0.00 0.00 0.00 3.18
3882 5831 1.078708 CCGGCCCAAGTACGTTCAT 60.079 57.895 0.00 0.00 0.00 2.57
3883 5832 1.087771 CCGGCCCAAGTACGTTCATC 61.088 60.000 0.00 0.00 0.00 2.92
3884 5833 1.418342 CGGCCCAAGTACGTTCATCG 61.418 60.000 0.00 0.00 46.00 3.84
3885 5834 0.108520 GGCCCAAGTACGTTCATCGA 60.109 55.000 0.00 0.00 42.86 3.59
3886 5835 1.472728 GGCCCAAGTACGTTCATCGAT 60.473 52.381 0.00 0.00 42.86 3.59
3887 5836 1.859080 GCCCAAGTACGTTCATCGATC 59.141 52.381 0.00 0.00 42.86 3.69
3888 5837 2.737359 GCCCAAGTACGTTCATCGATCA 60.737 50.000 0.00 0.00 42.86 2.92
3889 5838 3.517602 CCCAAGTACGTTCATCGATCAA 58.482 45.455 0.00 0.00 42.86 2.57
3890 5839 3.551890 CCCAAGTACGTTCATCGATCAAG 59.448 47.826 0.00 0.00 42.86 3.02
3891 5840 3.551890 CCAAGTACGTTCATCGATCAAGG 59.448 47.826 0.00 0.00 42.86 3.61
3892 5841 4.174009 CAAGTACGTTCATCGATCAAGGT 58.826 43.478 12.00 12.00 42.86 3.50
3893 5842 4.451629 AGTACGTTCATCGATCAAGGTT 57.548 40.909 12.55 0.00 42.86 3.50
3894 5843 4.817517 AGTACGTTCATCGATCAAGGTTT 58.182 39.130 12.55 0.00 42.86 3.27
3895 5844 4.863131 AGTACGTTCATCGATCAAGGTTTC 59.137 41.667 12.55 7.05 42.86 2.78
3896 5845 3.926616 ACGTTCATCGATCAAGGTTTCT 58.073 40.909 1.23 0.00 42.86 2.52
3897 5846 3.927142 ACGTTCATCGATCAAGGTTTCTC 59.073 43.478 1.23 0.00 42.86 2.87
3898 5847 3.926527 CGTTCATCGATCAAGGTTTCTCA 59.073 43.478 0.00 0.00 42.86 3.27
3899 5848 4.201628 CGTTCATCGATCAAGGTTTCTCAC 60.202 45.833 0.00 0.00 42.86 3.51
3900 5849 7.134631 CGTTCATCGATCAAGGTTTCTCACC 62.135 48.000 0.00 0.00 43.72 4.02
3916 5865 4.111967 CCTTTTGGGTGGGCGAAT 57.888 55.556 0.00 0.00 35.46 3.34
3917 5866 1.890174 CCTTTTGGGTGGGCGAATC 59.110 57.895 0.00 0.00 35.46 2.52
3918 5867 0.897863 CCTTTTGGGTGGGCGAATCA 60.898 55.000 0.00 0.00 35.46 2.57
3919 5868 1.185315 CTTTTGGGTGGGCGAATCAT 58.815 50.000 0.00 0.00 0.00 2.45
3920 5869 0.894141 TTTTGGGTGGGCGAATCATG 59.106 50.000 0.00 0.00 0.00 3.07
3921 5870 0.038890 TTTGGGTGGGCGAATCATGA 59.961 50.000 0.00 0.00 0.00 3.07
3922 5871 0.258484 TTGGGTGGGCGAATCATGAT 59.742 50.000 1.18 1.18 0.00 2.45
3923 5872 0.466007 TGGGTGGGCGAATCATGATG 60.466 55.000 9.46 0.00 0.00 3.07
3924 5873 1.656441 GGTGGGCGAATCATGATGC 59.344 57.895 9.46 6.24 0.00 3.91
3925 5874 0.820891 GGTGGGCGAATCATGATGCT 60.821 55.000 9.46 0.00 0.00 3.79
3926 5875 1.027357 GTGGGCGAATCATGATGCTT 58.973 50.000 9.46 0.00 0.00 3.91
3927 5876 1.406539 GTGGGCGAATCATGATGCTTT 59.593 47.619 9.46 0.00 0.00 3.51
3928 5877 1.677576 TGGGCGAATCATGATGCTTTC 59.322 47.619 9.46 2.74 0.00 2.62
3929 5878 1.677576 GGGCGAATCATGATGCTTTCA 59.322 47.619 9.46 0.00 39.12 2.69
3930 5879 2.099592 GGGCGAATCATGATGCTTTCAA 59.900 45.455 9.46 0.00 38.03 2.69
3931 5880 3.429272 GGGCGAATCATGATGCTTTCAAA 60.429 43.478 9.46 0.00 38.03 2.69
3932 5881 4.175516 GGCGAATCATGATGCTTTCAAAA 58.824 39.130 9.46 0.00 38.03 2.44
3933 5882 4.626604 GGCGAATCATGATGCTTTCAAAAA 59.373 37.500 9.46 0.00 38.03 1.94
3934 5883 5.445010 GGCGAATCATGATGCTTTCAAAAAC 60.445 40.000 9.46 0.00 38.03 2.43
3935 5884 5.445010 GCGAATCATGATGCTTTCAAAAACC 60.445 40.000 9.46 0.00 38.03 3.27
3936 5885 5.634439 CGAATCATGATGCTTTCAAAAACCA 59.366 36.000 9.46 0.00 38.03 3.67
3937 5886 6.311935 CGAATCATGATGCTTTCAAAAACCAT 59.688 34.615 9.46 0.00 38.03 3.55
3938 5887 7.148540 CGAATCATGATGCTTTCAAAAACCATT 60.149 33.333 9.46 0.00 38.03 3.16
3939 5888 9.153721 GAATCATGATGCTTTCAAAAACCATTA 57.846 29.630 9.46 0.00 38.03 1.90
3940 5889 9.675464 AATCATGATGCTTTCAAAAACCATTAT 57.325 25.926 9.46 0.00 38.03 1.28
3941 5890 9.675464 ATCATGATGCTTTCAAAAACCATTATT 57.325 25.926 7.59 0.00 38.03 1.40
3942 5891 8.937884 TCATGATGCTTTCAAAAACCATTATTG 58.062 29.630 0.00 0.00 38.03 1.90
3943 5892 8.723311 CATGATGCTTTCAAAAACCATTATTGT 58.277 29.630 0.00 0.00 38.03 2.71
3944 5893 9.941325 ATGATGCTTTCAAAAACCATTATTGTA 57.059 25.926 0.00 0.00 38.03 2.41
3945 5894 9.770097 TGATGCTTTCAAAAACCATTATTGTAA 57.230 25.926 0.00 0.00 0.00 2.41
3948 5897 9.553064 TGCTTTCAAAAACCATTATTGTAATGT 57.447 25.926 8.42 0.00 0.00 2.71
3956 5905 8.600449 AAACCATTATTGTAATGTTTGTGTGG 57.400 30.769 8.42 0.00 0.00 4.17
3957 5906 6.696411 ACCATTATTGTAATGTTTGTGTGGG 58.304 36.000 8.42 0.00 0.00 4.61
3958 5907 6.268847 ACCATTATTGTAATGTTTGTGTGGGT 59.731 34.615 8.42 0.00 0.00 4.51
3959 5908 6.589523 CCATTATTGTAATGTTTGTGTGGGTG 59.410 38.462 8.42 0.00 0.00 4.61
3960 5909 6.961360 TTATTGTAATGTTTGTGTGGGTGA 57.039 33.333 0.00 0.00 0.00 4.02
3961 5910 5.860941 ATTGTAATGTTTGTGTGGGTGAA 57.139 34.783 0.00 0.00 0.00 3.18
3962 5911 5.661056 TTGTAATGTTTGTGTGGGTGAAA 57.339 34.783 0.00 0.00 0.00 2.69
3963 5912 5.255710 TGTAATGTTTGTGTGGGTGAAAG 57.744 39.130 0.00 0.00 0.00 2.62
3964 5913 4.950475 TGTAATGTTTGTGTGGGTGAAAGA 59.050 37.500 0.00 0.00 0.00 2.52
3965 5914 4.654091 AATGTTTGTGTGGGTGAAAGAG 57.346 40.909 0.00 0.00 0.00 2.85
3966 5915 3.080300 TGTTTGTGTGGGTGAAAGAGT 57.920 42.857 0.00 0.00 0.00 3.24
3967 5916 2.752354 TGTTTGTGTGGGTGAAAGAGTG 59.248 45.455 0.00 0.00 0.00 3.51
3968 5917 3.013921 GTTTGTGTGGGTGAAAGAGTGA 58.986 45.455 0.00 0.00 0.00 3.41
3969 5918 2.325583 TGTGTGGGTGAAAGAGTGAC 57.674 50.000 0.00 0.00 0.00 3.67
3970 5919 1.557371 TGTGTGGGTGAAAGAGTGACA 59.443 47.619 0.00 0.00 0.00 3.58
3971 5920 2.026729 TGTGTGGGTGAAAGAGTGACAA 60.027 45.455 0.00 0.00 0.00 3.18
3972 5921 2.354821 GTGTGGGTGAAAGAGTGACAAC 59.645 50.000 0.00 0.00 0.00 3.32
3973 5922 2.026729 TGTGGGTGAAAGAGTGACAACA 60.027 45.455 0.00 0.00 0.00 3.33
3974 5923 3.214328 GTGGGTGAAAGAGTGACAACAT 58.786 45.455 0.00 0.00 0.00 2.71
3975 5924 3.632145 GTGGGTGAAAGAGTGACAACATT 59.368 43.478 0.00 0.00 0.00 2.71
3976 5925 3.631686 TGGGTGAAAGAGTGACAACATTG 59.368 43.478 0.00 0.00 0.00 2.82
3977 5926 3.632145 GGGTGAAAGAGTGACAACATTGT 59.368 43.478 0.00 0.00 45.65 2.71
3978 5927 4.097892 GGGTGAAAGAGTGACAACATTGTT 59.902 41.667 0.00 0.00 42.43 2.83
3979 5928 5.036737 GGTGAAAGAGTGACAACATTGTTG 58.963 41.667 24.40 24.40 42.43 3.33
3980 5929 4.500477 GTGAAAGAGTGACAACATTGTTGC 59.500 41.667 25.60 18.93 42.43 4.17
3981 5930 4.398988 TGAAAGAGTGACAACATTGTTGCT 59.601 37.500 25.60 16.29 42.43 3.91
3982 5931 4.558538 AAGAGTGACAACATTGTTGCTC 57.441 40.909 25.60 22.17 42.43 4.26
3983 5932 2.880890 AGAGTGACAACATTGTTGCTCC 59.119 45.455 25.60 16.50 42.43 4.70
3984 5933 2.618241 GAGTGACAACATTGTTGCTCCA 59.382 45.455 25.60 18.47 42.43 3.86
3985 5934 2.620115 AGTGACAACATTGTTGCTCCAG 59.380 45.455 25.60 5.26 42.43 3.86
3986 5935 2.358898 GTGACAACATTGTTGCTCCAGT 59.641 45.455 25.60 8.38 42.43 4.00
3987 5936 2.618241 TGACAACATTGTTGCTCCAGTC 59.382 45.455 25.60 16.12 42.43 3.51
3988 5937 1.956477 ACAACATTGTTGCTCCAGTCC 59.044 47.619 25.60 0.00 38.47 3.85
3989 5938 1.955778 CAACATTGTTGCTCCAGTCCA 59.044 47.619 16.05 0.00 0.00 4.02
3990 5939 2.361757 CAACATTGTTGCTCCAGTCCAA 59.638 45.455 16.05 0.00 0.00 3.53
3991 5940 2.880443 ACATTGTTGCTCCAGTCCAAT 58.120 42.857 0.00 0.00 0.00 3.16
3992 5941 3.233507 ACATTGTTGCTCCAGTCCAATT 58.766 40.909 0.00 0.00 0.00 2.32
3993 5942 3.006110 ACATTGTTGCTCCAGTCCAATTG 59.994 43.478 0.00 0.00 0.00 2.32
3994 5943 0.961019 TGTTGCTCCAGTCCAATTGC 59.039 50.000 0.00 0.00 0.00 3.56
3995 5944 0.961019 GTTGCTCCAGTCCAATTGCA 59.039 50.000 0.00 0.00 0.00 4.08
3996 5945 1.068055 GTTGCTCCAGTCCAATTGCAG 60.068 52.381 0.00 0.00 0.00 4.41
3997 5946 1.246056 TGCTCCAGTCCAATTGCAGC 61.246 55.000 0.00 0.95 0.00 5.25
3998 5947 1.941999 GCTCCAGTCCAATTGCAGCC 61.942 60.000 0.00 0.00 0.00 4.85
3999 5948 1.304381 TCCAGTCCAATTGCAGCCC 60.304 57.895 0.00 0.00 0.00 5.19
4000 5949 2.703798 CCAGTCCAATTGCAGCCCG 61.704 63.158 0.00 0.00 0.00 6.13
4001 5950 1.973281 CAGTCCAATTGCAGCCCGT 60.973 57.895 0.00 0.00 0.00 5.28
4002 5951 1.228552 AGTCCAATTGCAGCCCGTT 60.229 52.632 0.00 0.00 0.00 4.44
4003 5952 0.827507 AGTCCAATTGCAGCCCGTTT 60.828 50.000 0.00 0.00 0.00 3.60
4004 5953 0.885196 GTCCAATTGCAGCCCGTTTA 59.115 50.000 0.00 0.00 0.00 2.01
4005 5954 1.476488 GTCCAATTGCAGCCCGTTTAT 59.524 47.619 0.00 0.00 0.00 1.40
4006 5955 1.748493 TCCAATTGCAGCCCGTTTATC 59.252 47.619 0.00 0.00 0.00 1.75
4007 5956 1.476085 CCAATTGCAGCCCGTTTATCA 59.524 47.619 0.00 0.00 0.00 2.15
4008 5957 2.094286 CCAATTGCAGCCCGTTTATCAA 60.094 45.455 0.00 0.00 0.00 2.57
4009 5958 3.583806 CAATTGCAGCCCGTTTATCAAA 58.416 40.909 0.00 0.00 0.00 2.69
4010 5959 3.508744 ATTGCAGCCCGTTTATCAAAG 57.491 42.857 0.00 0.00 0.00 2.77
4011 5960 1.904287 TGCAGCCCGTTTATCAAAGT 58.096 45.000 0.00 0.00 0.00 2.66
4012 5961 1.810151 TGCAGCCCGTTTATCAAAGTC 59.190 47.619 0.00 0.00 0.00 3.01
4013 5962 2.084546 GCAGCCCGTTTATCAAAGTCT 58.915 47.619 0.00 0.00 0.00 3.24
4014 5963 2.488153 GCAGCCCGTTTATCAAAGTCTT 59.512 45.455 0.00 0.00 0.00 3.01
4015 5964 3.057526 GCAGCCCGTTTATCAAAGTCTTT 60.058 43.478 0.00 0.00 0.00 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 7.939039 ACTCAGTTTTGTGAGATGGAAAAGATA 59.061 33.333 7.85 0.00 46.02 1.98
6 7 6.382869 ACTCAGTTTTGTGAGATGGAAAAG 57.617 37.500 7.85 0.00 46.02 2.27
7 8 9.739276 ATATACTCAGTTTTGTGAGATGGAAAA 57.261 29.630 7.85 0.00 46.02 2.29
19 20 7.755373 TGACGAACTCTCATATACTCAGTTTTG 59.245 37.037 0.00 0.00 0.00 2.44
23 24 6.544197 ACATGACGAACTCTCATATACTCAGT 59.456 38.462 0.00 0.00 0.00 3.41
24 25 6.964908 ACATGACGAACTCTCATATACTCAG 58.035 40.000 0.00 0.00 0.00 3.35
25 26 6.944234 ACATGACGAACTCTCATATACTCA 57.056 37.500 0.00 0.00 0.00 3.41
28 29 7.111732 CGTTGTACATGACGAACTCTCATATAC 59.888 40.741 13.58 0.00 41.53 1.47
36 37 6.307318 AGAAATACGTTGTACATGACGAACTC 59.693 38.462 23.11 14.07 41.53 3.01
56 57 3.675348 TCCAGGCCATGATGAAGAAAT 57.325 42.857 5.01 0.00 0.00 2.17
66 67 0.179936 GTCTCCTCTTCCAGGCCATG 59.820 60.000 5.01 0.00 43.08 3.66
86 87 6.146047 TGATATACAGGGCTGCCTCATATAT 58.854 40.000 19.68 19.68 0.00 0.86
136 139 1.135199 TCGGACCATAAAGACACGAGC 60.135 52.381 0.00 0.00 0.00 5.03
249 254 8.781951 TGAAAAATTAATGATCCCTCCTCTACT 58.218 33.333 0.00 0.00 0.00 2.57
274 279 8.380644 CAACGGTGTCTTTAACTTATATGAGTG 58.619 37.037 0.16 0.00 0.00 3.51
279 284 7.605410 CCACAACGGTGTCTTTAACTTATAT 57.395 36.000 1.16 0.00 43.71 0.86
296 301 1.204704 TCATAGGAGCTCACCACAACG 59.795 52.381 17.19 0.00 0.00 4.10
302 307 2.216898 GCATTGTCATAGGAGCTCACC 58.783 52.381 17.19 0.00 0.00 4.02
335 340 5.762179 AGGTTGAGAAATCCACACATAGA 57.238 39.130 0.00 0.00 0.00 1.98
351 356 1.689813 TGGTGTAGCGAAGAAGGTTGA 59.310 47.619 0.00 0.00 0.00 3.18
363 368 2.289694 ACAGGACATGAGTTGGTGTAGC 60.290 50.000 0.00 0.00 0.00 3.58
406 411 1.094785 GATAGGGTTGCGTGCAATGT 58.905 50.000 10.85 1.48 38.28 2.71
412 417 1.064505 CATGCTTGATAGGGTTGCGTG 59.935 52.381 0.00 0.00 34.94 5.34
420 425 5.840243 TTGGTGAAATCATGCTTGATAGG 57.160 39.130 14.86 0.00 41.83 2.57
421 426 8.712285 ATTTTTGGTGAAATCATGCTTGATAG 57.288 30.769 14.86 0.00 41.83 2.08
442 447 7.095102 GGCACAAAGAAAGCATCAACATATTTT 60.095 33.333 0.00 0.00 0.00 1.82
444 449 5.870978 GGCACAAAGAAAGCATCAACATATT 59.129 36.000 0.00 0.00 0.00 1.28
446 451 4.321899 GGGCACAAAGAAAGCATCAACATA 60.322 41.667 0.00 0.00 0.00 2.29
449 454 2.036346 AGGGCACAAAGAAAGCATCAAC 59.964 45.455 0.00 0.00 0.00 3.18
451 456 1.999648 AGGGCACAAAGAAAGCATCA 58.000 45.000 0.00 0.00 0.00 3.07
480 485 3.833559 AAAGACCAACCATCCAATCCT 57.166 42.857 0.00 0.00 0.00 3.24
485 490 5.013704 ACACATACTAAAGACCAACCATCCA 59.986 40.000 0.00 0.00 0.00 3.41
489 494 7.608761 GGAAATACACATACTAAAGACCAACCA 59.391 37.037 0.00 0.00 0.00 3.67
493 498 7.913789 ACTGGAAATACACATACTAAAGACCA 58.086 34.615 0.00 0.00 0.00 4.02
515 520 6.559810 TGGCCATTTCGTGAATAAATAACTG 58.440 36.000 0.00 0.00 0.00 3.16
529 534 3.666902 CGTGTTTTAGTCTGGCCATTTCG 60.667 47.826 5.51 0.00 0.00 3.46
533 538 2.224426 TGTCGTGTTTTAGTCTGGCCAT 60.224 45.455 5.51 0.00 0.00 4.40
534 539 1.139256 TGTCGTGTTTTAGTCTGGCCA 59.861 47.619 4.71 4.71 0.00 5.36
536 541 3.064207 TCATGTCGTGTTTTAGTCTGGC 58.936 45.455 0.00 0.00 0.00 4.85
659 743 9.139174 GCAAAAATGCACGGCTATAAATATATT 57.861 29.630 0.00 0.00 34.41 1.28
666 750 2.493675 TGGCAAAAATGCACGGCTATAA 59.506 40.909 2.97 0.00 36.33 0.98
709 793 8.999895 AGAAATACACTTATATACCCCACAACT 58.000 33.333 0.00 0.00 0.00 3.16
730 817 6.126361 ACCTGCTGAGGGAAATATGTAGAAAT 60.126 38.462 0.00 0.00 44.84 2.17
762 849 2.645297 TGGGCCAAAGACCACTGTATAA 59.355 45.455 2.13 0.00 0.00 0.98
767 854 0.251297 TCATGGGCCAAAGACCACTG 60.251 55.000 11.89 0.79 40.05 3.66
847 934 5.188434 TCAATTCAGAAACTATGAGGGCAG 58.812 41.667 0.00 0.00 0.00 4.85
875 966 1.294138 GATGGGGAACGACGGAACA 59.706 57.895 0.00 0.00 0.00 3.18
876 967 0.739813 CTGATGGGGAACGACGGAAC 60.740 60.000 0.00 0.00 0.00 3.62
877 968 1.594833 CTGATGGGGAACGACGGAA 59.405 57.895 0.00 0.00 0.00 4.30
878 969 2.355986 CCTGATGGGGAACGACGGA 61.356 63.158 0.00 0.00 0.00 4.69
879 970 2.186903 CCTGATGGGGAACGACGG 59.813 66.667 0.00 0.00 0.00 4.79
880 971 1.672854 TAGCCTGATGGGGAACGACG 61.673 60.000 0.00 0.00 35.12 5.12
881 972 0.759346 ATAGCCTGATGGGGAACGAC 59.241 55.000 0.00 0.00 35.12 4.34
882 973 1.048601 GATAGCCTGATGGGGAACGA 58.951 55.000 0.00 0.00 35.12 3.85
887 978 2.178580 GAGAGAGATAGCCTGATGGGG 58.821 57.143 0.00 0.00 35.12 4.96
956 1050 8.915057 AAATTATCAGAGAGAGAGAGAGAGAG 57.085 38.462 0.00 0.00 0.00 3.20
957 1051 9.123902 CAAAATTATCAGAGAGAGAGAGAGAGA 57.876 37.037 0.00 0.00 0.00 3.10
958 1052 9.123902 TCAAAATTATCAGAGAGAGAGAGAGAG 57.876 37.037 0.00 0.00 0.00 3.20
959 1053 9.123902 CTCAAAATTATCAGAGAGAGAGAGAGA 57.876 37.037 0.00 0.00 0.00 3.10
960 1054 8.355169 CCTCAAAATTATCAGAGAGAGAGAGAG 58.645 40.741 0.00 0.00 0.00 3.20
961 1055 7.201902 GCCTCAAAATTATCAGAGAGAGAGAGA 60.202 40.741 0.00 0.00 0.00 3.10
962 1056 6.925165 GCCTCAAAATTATCAGAGAGAGAGAG 59.075 42.308 0.00 0.00 0.00 3.20
963 1057 6.610830 AGCCTCAAAATTATCAGAGAGAGAGA 59.389 38.462 0.00 0.00 0.00 3.10
983 1077 2.098770 GCCATCTTCAAATCACAGCCTC 59.901 50.000 0.00 0.00 0.00 4.70
988 1082 4.290711 TCTCTGCCATCTTCAAATCACA 57.709 40.909 0.00 0.00 0.00 3.58
994 1088 3.580022 TCACTCTTCTCTGCCATCTTCAA 59.420 43.478 0.00 0.00 0.00 2.69
1064 1158 4.796495 GGTGGCCGTGGTGATCCC 62.796 72.222 0.00 0.00 0.00 3.85
1097 1191 0.248458 GCCAACAACGACAACAGTGG 60.248 55.000 0.00 0.00 0.00 4.00
1100 1194 1.358759 GGGCCAACAACGACAACAG 59.641 57.895 4.39 0.00 0.00 3.16
1104 1198 2.589442 GACGGGCCAACAACGACA 60.589 61.111 4.39 0.00 0.00 4.35
1124 1218 4.446371 CTTGAGGTGATCATCAGTAACCC 58.554 47.826 9.06 0.00 37.89 4.11
1211 1352 2.401766 GCAGCCTGTGATTCCACGG 61.402 63.158 0.00 0.00 46.06 4.94
1212 1353 2.743752 CGCAGCCTGTGATTCCACG 61.744 63.158 0.00 0.00 46.06 4.94
1213 1354 2.401766 CCGCAGCCTGTGATTCCAC 61.402 63.158 6.88 0.00 43.46 4.02
1214 1355 2.046023 CCGCAGCCTGTGATTCCA 60.046 61.111 6.88 0.00 0.00 3.53
1215 1356 3.512516 GCCGCAGCCTGTGATTCC 61.513 66.667 6.88 0.00 0.00 3.01
1216 1357 3.869272 CGCCGCAGCCTGTGATTC 61.869 66.667 6.88 0.00 34.57 2.52
1245 1386 4.457496 AGGAGCGCCACCATGTCG 62.457 66.667 20.53 0.00 36.29 4.35
1246 1387 2.512515 GAGGAGCGCCACCATGTC 60.513 66.667 20.53 8.21 36.29 3.06
1247 1388 4.457496 CGAGGAGCGCCACCATGT 62.457 66.667 20.53 3.05 36.29 3.21
1306 1447 2.369532 GTGTGGACTAAGGTGTACCCAA 59.630 50.000 0.00 0.00 36.42 4.12
1342 2280 2.877097 TGAATATGGTGTGGTGCTGT 57.123 45.000 0.00 0.00 0.00 4.40
1393 2378 1.968493 GAAGGTACGGGGCAGATGATA 59.032 52.381 0.00 0.00 0.00 2.15
1394 2379 0.759346 GAAGGTACGGGGCAGATGAT 59.241 55.000 0.00 0.00 0.00 2.45
1395 2380 1.335132 GGAAGGTACGGGGCAGATGA 61.335 60.000 0.00 0.00 0.00 2.92
1396 2381 1.146263 GGAAGGTACGGGGCAGATG 59.854 63.158 0.00 0.00 0.00 2.90
1397 2382 1.306654 TGGAAGGTACGGGGCAGAT 60.307 57.895 0.00 0.00 0.00 2.90
1398 2383 2.120940 TGGAAGGTACGGGGCAGA 59.879 61.111 0.00 0.00 0.00 4.26
1399 2384 1.838073 AAGTGGAAGGTACGGGGCAG 61.838 60.000 0.00 0.00 0.00 4.85
1400 2385 1.420532 AAAGTGGAAGGTACGGGGCA 61.421 55.000 0.00 0.00 0.00 5.36
1401 2386 0.958876 CAAAGTGGAAGGTACGGGGC 60.959 60.000 0.00 0.00 0.00 5.80
1402 2387 0.322187 CCAAAGTGGAAGGTACGGGG 60.322 60.000 0.00 0.00 40.96 5.73
1406 2391 3.582780 CGACTACCAAAGTGGAAGGTAC 58.417 50.000 0.18 0.00 40.96 3.34
1568 3445 3.488090 GCACGCCGTAGTTGCTCC 61.488 66.667 0.00 0.00 0.00 4.70
1595 3472 2.904866 GCACGGCCACCTCAAACA 60.905 61.111 2.24 0.00 0.00 2.83
1651 3528 3.109151 TGGTGACGTATCCCCAGTATTT 58.891 45.455 6.12 0.00 0.00 1.40
1678 3555 2.174360 GTGTAGGTTCCCTTCGGTACT 58.826 52.381 0.00 0.00 34.61 2.73
1680 3557 1.176527 CGTGTAGGTTCCCTTCGGTA 58.823 55.000 0.00 0.00 34.61 4.02
1726 3603 1.001378 ACAAGCCTCGTGCAAATGAAC 60.001 47.619 0.00 0.00 44.83 3.18
1730 3607 1.001378 GTGAACAAGCCTCGTGCAAAT 60.001 47.619 0.00 0.00 44.83 2.32
1731 3608 0.380378 GTGAACAAGCCTCGTGCAAA 59.620 50.000 0.00 0.00 44.83 3.68
1733 3610 2.243957 CGTGAACAAGCCTCGTGCA 61.244 57.895 2.77 0.00 44.83 4.57
1734 3611 1.291877 ATCGTGAACAAGCCTCGTGC 61.292 55.000 0.00 0.00 41.71 5.34
1735 3612 0.439985 CATCGTGAACAAGCCTCGTG 59.560 55.000 0.00 0.00 0.00 4.35
1736 3613 1.291877 GCATCGTGAACAAGCCTCGT 61.292 55.000 0.00 0.00 0.00 4.18
1739 3616 0.877071 CAAGCATCGTGAACAAGCCT 59.123 50.000 0.00 0.00 0.00 4.58
1742 3619 3.607422 TGAACAAGCATCGTGAACAAG 57.393 42.857 0.00 0.00 0.00 3.16
1743 3620 4.566545 AATGAACAAGCATCGTGAACAA 57.433 36.364 0.00 0.00 0.00 2.83
1744 3621 4.289342 CAAATGAACAAGCATCGTGAACA 58.711 39.130 0.00 0.00 0.00 3.18
1745 3622 3.120121 GCAAATGAACAAGCATCGTGAAC 59.880 43.478 0.00 0.00 0.00 3.18
1746 3623 3.243334 TGCAAATGAACAAGCATCGTGAA 60.243 39.130 0.00 0.00 31.05 3.18
1747 3624 2.292845 TGCAAATGAACAAGCATCGTGA 59.707 40.909 0.00 0.00 31.05 4.35
1748 3625 2.663808 TGCAAATGAACAAGCATCGTG 58.336 42.857 0.00 0.00 31.05 4.35
1749 3626 3.052036 GTTGCAAATGAACAAGCATCGT 58.948 40.909 0.00 0.00 36.80 3.73
1750 3627 2.089427 CGTTGCAAATGAACAAGCATCG 59.911 45.455 0.00 0.00 41.66 3.84
1751 3628 2.159934 GCGTTGCAAATGAACAAGCATC 60.160 45.455 0.00 0.00 36.80 3.91
1752 3629 1.794116 GCGTTGCAAATGAACAAGCAT 59.206 42.857 0.00 0.00 36.80 3.79
1753 3630 1.207390 GCGTTGCAAATGAACAAGCA 58.793 45.000 0.00 0.00 33.73 3.91
1810 3687 7.663081 AGGGAAATAACTGCATATGTACAGATG 59.337 37.037 23.16 23.16 37.35 2.90
1824 3701 9.289303 CATGTTAAAAATCGAGGGAAATAACTG 57.711 33.333 0.00 0.00 0.00 3.16
1987 3907 6.939730 TGGACTTAAAATCTGTGCAGTTCATA 59.060 34.615 0.00 0.00 0.00 2.15
2151 4083 5.006153 ACCTACAAGAACCAAAAGCAAAC 57.994 39.130 0.00 0.00 0.00 2.93
2162 4094 2.226437 TCACGGTCGTACCTACAAGAAC 59.774 50.000 0.00 0.00 35.66 3.01
2173 4105 2.345760 GGCTCCCTTCACGGTCGTA 61.346 63.158 0.00 0.00 0.00 3.43
2415 4348 4.591321 TGGTGCCTAGAGGAAAATCAAT 57.409 40.909 0.00 0.00 37.39 2.57
2418 4351 3.696548 CCTTTGGTGCCTAGAGGAAAATC 59.303 47.826 0.00 0.00 37.39 2.17
2505 4438 2.425668 GGTTATTACCACACCACATGGC 59.574 50.000 0.00 0.00 44.36 4.40
2649 4582 1.220749 GCGGATGCCTCTGTAACCA 59.779 57.895 0.00 0.00 33.98 3.67
2827 4760 2.127270 CACGACGTGTGCAATGCC 60.127 61.111 19.77 0.00 42.70 4.40
2862 4795 1.153997 GACGTCGAGCTTCTCCACC 60.154 63.158 0.00 0.00 0.00 4.61
2952 4885 3.771160 CCTTCCCCGGTGTCCTCG 61.771 72.222 0.00 0.00 0.00 4.63
2953 4886 1.486145 TTTCCTTCCCCGGTGTCCTC 61.486 60.000 0.00 0.00 0.00 3.71
2960 4893 1.000359 AGGCAATTTCCTTCCCCGG 60.000 57.895 0.00 0.00 30.82 5.73
2969 4902 2.229543 TGCACATCACAGAGGCAATTTC 59.770 45.455 0.00 0.00 0.00 2.17
3005 4938 3.243873 CCTCCAACGATCTTATGCAGCTA 60.244 47.826 0.00 0.00 0.00 3.32
3070 5003 5.252969 TGAAAGCCAGATAAATCATGTGC 57.747 39.130 0.00 0.00 0.00 4.57
3214 5157 9.206870 ACGATGCAAATAAAACAATTTCAGATT 57.793 25.926 0.00 0.00 0.00 2.40
3215 5158 8.649841 CACGATGCAAATAAAACAATTTCAGAT 58.350 29.630 0.00 0.00 0.00 2.90
3281 5230 3.473923 CAAACCTTTGCATTTGGGAGT 57.526 42.857 3.09 0.00 33.11 3.85
3635 5584 3.845781 AGAAAGTGGCACTCTTGAAGA 57.154 42.857 22.31 0.00 41.64 2.87
3636 5585 3.059325 CGAAGAAAGTGGCACTCTTGAAG 60.059 47.826 22.31 10.39 41.64 3.02
3637 5586 2.872245 CGAAGAAAGTGGCACTCTTGAA 59.128 45.455 22.31 0.00 41.64 2.69
3638 5587 2.158957 ACGAAGAAAGTGGCACTCTTGA 60.159 45.455 22.31 0.00 41.64 3.02
3639 5588 2.213499 ACGAAGAAAGTGGCACTCTTG 58.787 47.619 22.31 16.01 41.64 3.02
3640 5589 2.484889 GACGAAGAAAGTGGCACTCTT 58.515 47.619 22.31 20.19 44.60 2.85
3641 5590 1.603172 CGACGAAGAAAGTGGCACTCT 60.603 52.381 22.31 6.98 0.00 3.24
3642 5591 0.784778 CGACGAAGAAAGTGGCACTC 59.215 55.000 22.31 9.85 0.00 3.51
3643 5592 0.104304 ACGACGAAGAAAGTGGCACT 59.896 50.000 15.88 15.88 0.00 4.40
3644 5593 0.507358 GACGACGAAGAAAGTGGCAC 59.493 55.000 10.29 10.29 0.00 5.01
3645 5594 0.937699 CGACGACGAAGAAAGTGGCA 60.938 55.000 0.00 0.00 42.66 4.92
3646 5595 0.938168 ACGACGACGAAGAAAGTGGC 60.938 55.000 15.32 0.00 42.66 5.01
3647 5596 1.050767 GACGACGACGAAGAAAGTGG 58.949 55.000 15.32 0.00 42.66 4.00
3648 5597 2.033793 AGACGACGACGAAGAAAGTG 57.966 50.000 15.32 0.00 42.66 3.16
3649 5598 4.083643 TCAATAGACGACGACGAAGAAAGT 60.084 41.667 15.32 0.00 42.66 2.66
3650 5599 4.400845 TCAATAGACGACGACGAAGAAAG 58.599 43.478 15.32 0.07 42.66 2.62
3651 5600 4.400845 CTCAATAGACGACGACGAAGAAA 58.599 43.478 15.32 0.00 42.66 2.52
3652 5601 3.727079 GCTCAATAGACGACGACGAAGAA 60.727 47.826 15.32 0.00 42.66 2.52
3653 5602 2.222976 GCTCAATAGACGACGACGAAGA 60.223 50.000 15.32 0.00 42.66 2.87
3654 5603 2.102633 GCTCAATAGACGACGACGAAG 58.897 52.381 15.32 0.00 42.66 3.79
3655 5604 1.465777 TGCTCAATAGACGACGACGAA 59.534 47.619 15.32 0.00 42.66 3.85
3656 5605 1.081094 TGCTCAATAGACGACGACGA 58.919 50.000 15.32 0.00 42.66 4.20
3657 5606 2.037649 GATGCTCAATAGACGACGACG 58.962 52.381 5.58 5.58 45.75 5.12
3658 5607 2.037649 CGATGCTCAATAGACGACGAC 58.962 52.381 0.00 0.00 0.00 4.34
3659 5608 1.669265 ACGATGCTCAATAGACGACGA 59.331 47.619 0.00 0.00 0.00 4.20
3660 5609 2.106750 ACGATGCTCAATAGACGACG 57.893 50.000 0.00 0.00 0.00 5.12
3661 5610 6.019801 ACAAAATACGATGCTCAATAGACGAC 60.020 38.462 0.00 0.00 0.00 4.34
3662 5611 6.019881 CACAAAATACGATGCTCAATAGACGA 60.020 38.462 0.00 0.00 0.00 4.20
3663 5612 6.019881 TCACAAAATACGATGCTCAATAGACG 60.020 38.462 0.00 0.00 0.00 4.18
3664 5613 7.222805 TCTCACAAAATACGATGCTCAATAGAC 59.777 37.037 0.00 0.00 0.00 2.59
3665 5614 7.264947 TCTCACAAAATACGATGCTCAATAGA 58.735 34.615 0.00 0.00 0.00 1.98
3666 5615 7.468922 TCTCACAAAATACGATGCTCAATAG 57.531 36.000 0.00 0.00 0.00 1.73
3667 5616 7.841915 TTCTCACAAAATACGATGCTCAATA 57.158 32.000 0.00 0.00 0.00 1.90
3668 5617 6.741992 TTCTCACAAAATACGATGCTCAAT 57.258 33.333 0.00 0.00 0.00 2.57
3669 5618 6.741992 ATTCTCACAAAATACGATGCTCAA 57.258 33.333 0.00 0.00 0.00 3.02
3670 5619 7.841915 TTATTCTCACAAAATACGATGCTCA 57.158 32.000 0.00 0.00 0.00 4.26
3671 5620 9.722056 AATTTATTCTCACAAAATACGATGCTC 57.278 29.630 0.00 0.00 0.00 4.26
3690 5639 9.573133 CGCCAAAAGAATGAGAGTAAATTTATT 57.427 29.630 0.31 0.00 0.00 1.40
3691 5640 8.190784 CCGCCAAAAGAATGAGAGTAAATTTAT 58.809 33.333 0.31 0.00 0.00 1.40
3692 5641 7.175990 ACCGCCAAAAGAATGAGAGTAAATTTA 59.824 33.333 0.00 0.00 0.00 1.40
3693 5642 6.015434 ACCGCCAAAAGAATGAGAGTAAATTT 60.015 34.615 0.00 0.00 0.00 1.82
3694 5643 5.476945 ACCGCCAAAAGAATGAGAGTAAATT 59.523 36.000 0.00 0.00 0.00 1.82
3695 5644 5.010282 ACCGCCAAAAGAATGAGAGTAAAT 58.990 37.500 0.00 0.00 0.00 1.40
3696 5645 4.215399 CACCGCCAAAAGAATGAGAGTAAA 59.785 41.667 0.00 0.00 0.00 2.01
3697 5646 3.751175 CACCGCCAAAAGAATGAGAGTAA 59.249 43.478 0.00 0.00 0.00 2.24
3698 5647 3.334691 CACCGCCAAAAGAATGAGAGTA 58.665 45.455 0.00 0.00 0.00 2.59
3699 5648 2.154462 CACCGCCAAAAGAATGAGAGT 58.846 47.619 0.00 0.00 0.00 3.24
3700 5649 1.135575 GCACCGCCAAAAGAATGAGAG 60.136 52.381 0.00 0.00 0.00 3.20
3701 5650 0.881118 GCACCGCCAAAAGAATGAGA 59.119 50.000 0.00 0.00 0.00 3.27
3702 5651 3.406682 GCACCGCCAAAAGAATGAG 57.593 52.632 0.00 0.00 0.00 2.90
3714 5663 0.451783 CTTTAACCTCATGGCACCGC 59.548 55.000 0.00 0.00 36.63 5.68
3715 5664 2.009774 CTCTTTAACCTCATGGCACCG 58.990 52.381 0.00 0.00 36.63 4.94
3716 5665 3.073274 ACTCTTTAACCTCATGGCACC 57.927 47.619 0.00 0.00 36.63 5.01
3717 5666 5.453567 AAAACTCTTTAACCTCATGGCAC 57.546 39.130 0.00 0.00 36.63 5.01
3718 5667 6.775629 ACTAAAAACTCTTTAACCTCATGGCA 59.224 34.615 0.00 0.00 36.63 4.92
3719 5668 7.215719 ACTAAAAACTCTTTAACCTCATGGC 57.784 36.000 0.00 0.00 36.63 4.40
3720 5669 7.665974 AGGACTAAAAACTCTTTAACCTCATGG 59.334 37.037 0.00 0.00 39.83 3.66
3721 5670 8.622948 AGGACTAAAAACTCTTTAACCTCATG 57.377 34.615 0.00 0.00 0.00 3.07
3722 5671 7.603024 CGAGGACTAAAAACTCTTTAACCTCAT 59.397 37.037 18.95 0.58 37.37 2.90
3723 5672 6.927381 CGAGGACTAAAAACTCTTTAACCTCA 59.073 38.462 18.95 0.00 37.37 3.86
3724 5673 6.128607 GCGAGGACTAAAAACTCTTTAACCTC 60.129 42.308 0.00 0.00 35.99 3.85
3725 5674 5.699915 GCGAGGACTAAAAACTCTTTAACCT 59.300 40.000 0.00 0.00 0.00 3.50
3726 5675 5.467735 TGCGAGGACTAAAAACTCTTTAACC 59.532 40.000 0.00 0.00 0.00 2.85
3727 5676 6.535274 TGCGAGGACTAAAAACTCTTTAAC 57.465 37.500 0.00 0.00 0.00 2.01
3728 5677 7.556733 TTTGCGAGGACTAAAAACTCTTTAA 57.443 32.000 0.00 0.00 0.00 1.52
3729 5678 7.094933 GGATTTGCGAGGACTAAAAACTCTTTA 60.095 37.037 0.00 0.00 0.00 1.85
3730 5679 6.294010 GGATTTGCGAGGACTAAAAACTCTTT 60.294 38.462 0.00 0.00 0.00 2.52
3731 5680 5.181433 GGATTTGCGAGGACTAAAAACTCTT 59.819 40.000 0.00 0.00 0.00 2.85
3732 5681 4.695928 GGATTTGCGAGGACTAAAAACTCT 59.304 41.667 0.00 0.00 0.00 3.24
3733 5682 4.435651 CGGATTTGCGAGGACTAAAAACTC 60.436 45.833 0.00 0.00 0.00 3.01
3734 5683 3.435671 CGGATTTGCGAGGACTAAAAACT 59.564 43.478 0.00 0.00 0.00 2.66
3735 5684 3.434299 TCGGATTTGCGAGGACTAAAAAC 59.566 43.478 0.00 0.00 0.00 2.43
3736 5685 3.666274 TCGGATTTGCGAGGACTAAAAA 58.334 40.909 0.00 0.00 0.00 1.94
3737 5686 3.322211 TCGGATTTGCGAGGACTAAAA 57.678 42.857 0.00 0.00 0.00 1.52
3738 5687 3.536956 ATCGGATTTGCGAGGACTAAA 57.463 42.857 0.00 0.00 0.00 1.85
3739 5688 3.536956 AATCGGATTTGCGAGGACTAA 57.463 42.857 0.00 0.00 0.00 2.24
3740 5689 4.866508 ATAATCGGATTTGCGAGGACTA 57.133 40.909 8.76 0.00 0.00 2.59
3741 5690 3.753294 ATAATCGGATTTGCGAGGACT 57.247 42.857 8.76 0.00 0.00 3.85
3742 5691 3.807622 TGAATAATCGGATTTGCGAGGAC 59.192 43.478 8.76 0.00 0.00 3.85
3743 5692 4.058124 CTGAATAATCGGATTTGCGAGGA 58.942 43.478 8.76 0.00 33.44 3.71
3744 5693 4.058124 TCTGAATAATCGGATTTGCGAGG 58.942 43.478 8.76 0.00 36.01 4.63
3760 5709 8.552296 ACCAACCTAAACTTATCAGATCTGAAT 58.448 33.333 28.40 18.35 43.58 2.57
3761 5710 7.824289 CACCAACCTAAACTTATCAGATCTGAA 59.176 37.037 28.40 12.89 43.58 3.02
3762 5711 7.038302 ACACCAACCTAAACTTATCAGATCTGA 60.038 37.037 27.03 27.03 44.59 3.27
3763 5712 7.065085 CACACCAACCTAAACTTATCAGATCTG 59.935 40.741 17.07 17.07 0.00 2.90
3764 5713 7.106239 CACACCAACCTAAACTTATCAGATCT 58.894 38.462 0.00 0.00 0.00 2.75
3765 5714 6.879458 ACACACCAACCTAAACTTATCAGATC 59.121 38.462 0.00 0.00 0.00 2.75
3766 5715 6.779860 ACACACCAACCTAAACTTATCAGAT 58.220 36.000 0.00 0.00 0.00 2.90
3767 5716 6.182507 ACACACCAACCTAAACTTATCAGA 57.817 37.500 0.00 0.00 0.00 3.27
3768 5717 5.995282 TGACACACCAACCTAAACTTATCAG 59.005 40.000 0.00 0.00 0.00 2.90
3769 5718 5.931294 TGACACACCAACCTAAACTTATCA 58.069 37.500 0.00 0.00 0.00 2.15
3770 5719 6.567891 GCTTGACACACCAACCTAAACTTATC 60.568 42.308 0.00 0.00 0.00 1.75
3771 5720 5.240844 GCTTGACACACCAACCTAAACTTAT 59.759 40.000 0.00 0.00 0.00 1.73
3772 5721 4.577283 GCTTGACACACCAACCTAAACTTA 59.423 41.667 0.00 0.00 0.00 2.24
3773 5722 3.380320 GCTTGACACACCAACCTAAACTT 59.620 43.478 0.00 0.00 0.00 2.66
3774 5723 2.949644 GCTTGACACACCAACCTAAACT 59.050 45.455 0.00 0.00 0.00 2.66
3775 5724 2.034179 GGCTTGACACACCAACCTAAAC 59.966 50.000 0.00 0.00 0.00 2.01
3776 5725 2.303175 GGCTTGACACACCAACCTAAA 58.697 47.619 0.00 0.00 0.00 1.85
3777 5726 1.213182 TGGCTTGACACACCAACCTAA 59.787 47.619 0.00 0.00 0.00 2.69
3778 5727 0.840617 TGGCTTGACACACCAACCTA 59.159 50.000 0.00 0.00 0.00 3.08
3779 5728 0.185901 ATGGCTTGACACACCAACCT 59.814 50.000 0.00 0.00 36.94 3.50
3780 5729 1.039856 AATGGCTTGACACACCAACC 58.960 50.000 0.00 0.00 36.94 3.77
3781 5730 2.888834 AAATGGCTTGACACACCAAC 57.111 45.000 0.00 0.00 36.94 3.77
3782 5731 3.055530 ACAAAAATGGCTTGACACACCAA 60.056 39.130 0.00 0.00 36.94 3.67
3783 5732 2.499289 ACAAAAATGGCTTGACACACCA 59.501 40.909 0.00 0.00 37.99 4.17
3784 5733 2.865551 CACAAAAATGGCTTGACACACC 59.134 45.455 0.00 0.00 0.00 4.16
3785 5734 2.865551 CCACAAAAATGGCTTGACACAC 59.134 45.455 0.00 0.00 31.52 3.82
3786 5735 2.499289 ACCACAAAAATGGCTTGACACA 59.501 40.909 0.00 0.00 44.33 3.72
3787 5736 3.177997 ACCACAAAAATGGCTTGACAC 57.822 42.857 0.00 0.00 44.33 3.67
3788 5737 3.902881 AACCACAAAAATGGCTTGACA 57.097 38.095 0.00 0.00 44.33 3.58
3789 5738 4.187694 TCAAACCACAAAAATGGCTTGAC 58.812 39.130 6.54 0.00 45.56 3.18
3791 5740 5.528320 AGAATCAAACCACAAAAATGGCTTG 59.472 36.000 2.20 2.20 44.07 4.01
3792 5741 5.683681 AGAATCAAACCACAAAAATGGCTT 58.316 33.333 0.00 0.00 44.33 4.35
3793 5742 5.294734 AGAATCAAACCACAAAAATGGCT 57.705 34.783 0.00 0.00 44.33 4.75
3794 5743 6.183360 ACAAAGAATCAAACCACAAAAATGGC 60.183 34.615 0.00 0.00 44.33 4.40
3795 5744 7.065563 TCACAAAGAATCAAACCACAAAAATGG 59.934 33.333 0.00 0.00 46.10 3.16
3796 5745 7.972527 TCACAAAGAATCAAACCACAAAAATG 58.027 30.769 0.00 0.00 0.00 2.32
3797 5746 8.558973 TTCACAAAGAATCAAACCACAAAAAT 57.441 26.923 0.00 0.00 0.00 1.82
3798 5747 7.659390 ACTTCACAAAGAATCAAACCACAAAAA 59.341 29.630 0.00 0.00 35.25 1.94
3799 5748 7.158021 ACTTCACAAAGAATCAAACCACAAAA 58.842 30.769 0.00 0.00 35.25 2.44
3800 5749 6.696411 ACTTCACAAAGAATCAAACCACAAA 58.304 32.000 0.00 0.00 35.25 2.83
3801 5750 6.279513 ACTTCACAAAGAATCAAACCACAA 57.720 33.333 0.00 0.00 35.25 3.33
3802 5751 5.913137 ACTTCACAAAGAATCAAACCACA 57.087 34.783 0.00 0.00 35.25 4.17
3803 5752 6.329496 TCAACTTCACAAAGAATCAAACCAC 58.671 36.000 0.00 0.00 35.25 4.16
3804 5753 6.522625 TCAACTTCACAAAGAATCAAACCA 57.477 33.333 0.00 0.00 35.25 3.67
3805 5754 7.826260 TTTCAACTTCACAAAGAATCAAACC 57.174 32.000 0.00 0.00 35.25 3.27
3806 5755 9.305925 AGATTTCAACTTCACAAAGAATCAAAC 57.694 29.630 0.00 0.00 35.25 2.93
3807 5756 9.874205 AAGATTTCAACTTCACAAAGAATCAAA 57.126 25.926 0.00 0.00 35.25 2.69
3808 5757 9.874205 AAAGATTTCAACTTCACAAAGAATCAA 57.126 25.926 0.00 0.00 35.25 2.57
3809 5758 9.304731 CAAAGATTTCAACTTCACAAAGAATCA 57.695 29.630 0.00 0.00 35.25 2.57
3810 5759 8.758715 CCAAAGATTTCAACTTCACAAAGAATC 58.241 33.333 0.00 0.00 35.25 2.52
3811 5760 8.477256 TCCAAAGATTTCAACTTCACAAAGAAT 58.523 29.630 0.00 0.00 35.25 2.40
3812 5761 7.759433 GTCCAAAGATTTCAACTTCACAAAGAA 59.241 33.333 0.00 0.00 36.30 2.52
3813 5762 7.257722 GTCCAAAGATTTCAACTTCACAAAGA 58.742 34.615 0.00 0.00 36.30 2.52
3814 5763 6.197096 CGTCCAAAGATTTCAACTTCACAAAG 59.803 38.462 0.00 0.00 38.54 2.77
3815 5764 6.033341 CGTCCAAAGATTTCAACTTCACAAA 58.967 36.000 0.00 0.00 0.00 2.83
3816 5765 5.124776 ACGTCCAAAGATTTCAACTTCACAA 59.875 36.000 0.00 0.00 0.00 3.33
3817 5766 4.638421 ACGTCCAAAGATTTCAACTTCACA 59.362 37.500 0.00 0.00 0.00 3.58
3818 5767 5.169836 ACGTCCAAAGATTTCAACTTCAC 57.830 39.130 0.00 0.00 0.00 3.18
3819 5768 4.274950 GGACGTCCAAAGATTTCAACTTCA 59.725 41.667 29.75 0.00 35.64 3.02
3820 5769 4.274950 TGGACGTCCAAAGATTTCAACTTC 59.725 41.667 34.60 2.07 44.35 3.01
3821 5770 4.204012 TGGACGTCCAAAGATTTCAACTT 58.796 39.130 34.60 0.00 44.35 2.66
3822 5771 3.815809 TGGACGTCCAAAGATTTCAACT 58.184 40.909 34.60 0.00 44.35 3.16
3834 5783 1.616865 CCTAGAAGTGTTGGACGTCCA 59.383 52.381 33.23 33.23 45.94 4.02
3835 5784 1.067071 CCCTAGAAGTGTTGGACGTCC 60.067 57.143 28.17 28.17 33.84 4.79
3836 5785 1.067071 CCCCTAGAAGTGTTGGACGTC 60.067 57.143 7.13 7.13 33.56 4.34
3837 5786 0.974383 CCCCTAGAAGTGTTGGACGT 59.026 55.000 0.00 0.00 0.00 4.34
3838 5787 1.263356 TCCCCTAGAAGTGTTGGACG 58.737 55.000 0.00 0.00 0.00 4.79
3839 5788 2.838202 TGATCCCCTAGAAGTGTTGGAC 59.162 50.000 0.00 0.00 0.00 4.02
3840 5789 3.199442 TGATCCCCTAGAAGTGTTGGA 57.801 47.619 0.00 0.00 0.00 3.53
3841 5790 3.181450 GGATGATCCCCTAGAAGTGTTGG 60.181 52.174 0.00 0.00 0.00 3.77
3842 5791 4.078639 GGATGATCCCCTAGAAGTGTTG 57.921 50.000 0.00 0.00 0.00 3.33
3855 5804 3.497884 CTTGGGCCGGGGATGATCC 62.498 68.421 2.18 1.94 35.23 3.36
3856 5805 1.415672 TACTTGGGCCGGGGATGATC 61.416 60.000 2.18 0.00 0.00 2.92
3857 5806 1.385347 TACTTGGGCCGGGGATGAT 60.385 57.895 2.18 0.00 0.00 2.45
3858 5807 2.041430 TACTTGGGCCGGGGATGA 59.959 61.111 2.18 0.00 0.00 2.92
3859 5808 2.192175 GTACTTGGGCCGGGGATG 59.808 66.667 2.18 0.00 0.00 3.51
3860 5809 3.476419 CGTACTTGGGCCGGGGAT 61.476 66.667 2.18 0.00 0.00 3.85
3862 5811 3.963687 GAACGTACTTGGGCCGGGG 62.964 68.421 2.18 0.00 0.00 5.73
3863 5812 2.435410 GAACGTACTTGGGCCGGG 60.435 66.667 2.18 0.00 0.00 5.73
3864 5813 1.078708 ATGAACGTACTTGGGCCGG 60.079 57.895 0.00 0.00 0.00 6.13
3865 5814 1.418342 CGATGAACGTACTTGGGCCG 61.418 60.000 0.00 0.00 37.22 6.13
3866 5815 0.108520 TCGATGAACGTACTTGGGCC 60.109 55.000 0.00 0.00 43.13 5.80
3867 5816 1.859080 GATCGATGAACGTACTTGGGC 59.141 52.381 0.54 0.00 43.13 5.36
3868 5817 3.159353 TGATCGATGAACGTACTTGGG 57.841 47.619 0.54 0.00 43.13 4.12
3869 5818 3.551890 CCTTGATCGATGAACGTACTTGG 59.448 47.826 0.54 0.00 43.13 3.61
3870 5819 4.174009 ACCTTGATCGATGAACGTACTTG 58.826 43.478 0.54 0.00 43.13 3.16
3871 5820 4.451629 ACCTTGATCGATGAACGTACTT 57.548 40.909 0.54 0.00 43.13 2.24
3872 5821 4.451629 AACCTTGATCGATGAACGTACT 57.548 40.909 0.54 0.00 43.13 2.73
3873 5822 4.863131 AGAAACCTTGATCGATGAACGTAC 59.137 41.667 0.54 0.00 43.13 3.67
3874 5823 5.068234 AGAAACCTTGATCGATGAACGTA 57.932 39.130 0.54 0.00 43.13 3.57
3875 5824 3.926616 AGAAACCTTGATCGATGAACGT 58.073 40.909 0.54 0.00 43.13 3.99
3876 5825 3.926527 TGAGAAACCTTGATCGATGAACG 59.073 43.478 0.54 0.00 44.09 3.95
3877 5826 4.093556 GGTGAGAAACCTTGATCGATGAAC 59.906 45.833 0.54 0.00 46.55 3.18
3878 5827 4.253685 GGTGAGAAACCTTGATCGATGAA 58.746 43.478 0.54 0.00 46.55 2.57
3879 5828 3.861840 GGTGAGAAACCTTGATCGATGA 58.138 45.455 0.54 0.00 46.55 2.92
3899 5848 0.897863 TGATTCGCCCACCCAAAAGG 60.898 55.000 0.00 0.00 43.78 3.11
3900 5849 1.135024 CATGATTCGCCCACCCAAAAG 60.135 52.381 0.00 0.00 0.00 2.27
3901 5850 0.894141 CATGATTCGCCCACCCAAAA 59.106 50.000 0.00 0.00 0.00 2.44
3902 5851 0.038890 TCATGATTCGCCCACCCAAA 59.961 50.000 0.00 0.00 0.00 3.28
3903 5852 0.258484 ATCATGATTCGCCCACCCAA 59.742 50.000 1.18 0.00 0.00 4.12
3904 5853 0.466007 CATCATGATTCGCCCACCCA 60.466 55.000 5.16 0.00 0.00 4.51
3905 5854 1.799258 GCATCATGATTCGCCCACCC 61.799 60.000 5.16 0.00 0.00 4.61
3906 5855 0.820891 AGCATCATGATTCGCCCACC 60.821 55.000 5.16 0.00 0.00 4.61
3907 5856 1.027357 AAGCATCATGATTCGCCCAC 58.973 50.000 5.16 0.00 0.00 4.61
3908 5857 1.677576 GAAAGCATCATGATTCGCCCA 59.322 47.619 5.16 0.00 0.00 5.36
3909 5858 1.677576 TGAAAGCATCATGATTCGCCC 59.322 47.619 5.16 1.31 31.50 6.13
3910 5859 3.425577 TTGAAAGCATCATGATTCGCC 57.574 42.857 5.16 0.00 38.03 5.54
3911 5860 5.445010 GGTTTTTGAAAGCATCATGATTCGC 60.445 40.000 5.16 7.72 38.03 4.70
3912 5861 5.634439 TGGTTTTTGAAAGCATCATGATTCG 59.366 36.000 5.16 0.00 38.03 3.34
3913 5862 7.605410 ATGGTTTTTGAAAGCATCATGATTC 57.395 32.000 5.16 0.29 38.03 2.52
3914 5863 7.989416 AATGGTTTTTGAAAGCATCATGATT 57.011 28.000 15.74 0.00 38.03 2.57
3915 5864 9.675464 AATAATGGTTTTTGAAAGCATCATGAT 57.325 25.926 15.74 1.18 38.03 2.45
3916 5865 8.937884 CAATAATGGTTTTTGAAAGCATCATGA 58.062 29.630 15.74 0.00 38.03 3.07
3917 5866 8.723311 ACAATAATGGTTTTTGAAAGCATCATG 58.277 29.630 15.74 15.66 38.03 3.07
3918 5867 8.851541 ACAATAATGGTTTTTGAAAGCATCAT 57.148 26.923 15.74 6.91 38.03 2.45
3919 5868 9.770097 TTACAATAATGGTTTTTGAAAGCATCA 57.230 25.926 15.74 5.03 37.38 3.07
3922 5871 9.553064 ACATTACAATAATGGTTTTTGAAAGCA 57.447 25.926 12.06 7.62 32.14 3.91
3930 5879 9.050601 CCACACAAACATTACAATAATGGTTTT 57.949 29.630 8.75 1.50 35.54 2.43
3931 5880 7.659390 CCCACACAAACATTACAATAATGGTTT 59.341 33.333 8.75 6.33 35.54 3.27
3932 5881 7.158021 CCCACACAAACATTACAATAATGGTT 58.842 34.615 12.06 9.21 38.01 3.67
3933 5882 6.268847 ACCCACACAAACATTACAATAATGGT 59.731 34.615 12.06 3.75 32.14 3.55
3934 5883 6.589523 CACCCACACAAACATTACAATAATGG 59.410 38.462 12.06 0.00 32.14 3.16
3935 5884 7.374272 TCACCCACACAAACATTACAATAATG 58.626 34.615 6.96 6.96 0.00 1.90
3936 5885 7.531857 TCACCCACACAAACATTACAATAAT 57.468 32.000 0.00 0.00 0.00 1.28
3937 5886 6.961360 TCACCCACACAAACATTACAATAA 57.039 33.333 0.00 0.00 0.00 1.40
3938 5887 6.961360 TTCACCCACACAAACATTACAATA 57.039 33.333 0.00 0.00 0.00 1.90
3939 5888 5.860941 TTCACCCACACAAACATTACAAT 57.139 34.783 0.00 0.00 0.00 2.71
3940 5889 5.419155 TCTTTCACCCACACAAACATTACAA 59.581 36.000 0.00 0.00 0.00 2.41
3941 5890 4.950475 TCTTTCACCCACACAAACATTACA 59.050 37.500 0.00 0.00 0.00 2.41
3942 5891 5.067283 ACTCTTTCACCCACACAAACATTAC 59.933 40.000 0.00 0.00 0.00 1.89
3943 5892 5.067153 CACTCTTTCACCCACACAAACATTA 59.933 40.000 0.00 0.00 0.00 1.90
3944 5893 4.023291 ACTCTTTCACCCACACAAACATT 58.977 39.130 0.00 0.00 0.00 2.71
3945 5894 3.381272 CACTCTTTCACCCACACAAACAT 59.619 43.478 0.00 0.00 0.00 2.71
3946 5895 2.752354 CACTCTTTCACCCACACAAACA 59.248 45.455 0.00 0.00 0.00 2.83
3947 5896 3.013921 TCACTCTTTCACCCACACAAAC 58.986 45.455 0.00 0.00 0.00 2.93
3948 5897 3.013921 GTCACTCTTTCACCCACACAAA 58.986 45.455 0.00 0.00 0.00 2.83
3949 5898 2.026729 TGTCACTCTTTCACCCACACAA 60.027 45.455 0.00 0.00 0.00 3.33
3950 5899 1.557371 TGTCACTCTTTCACCCACACA 59.443 47.619 0.00 0.00 0.00 3.72
3951 5900 2.325583 TGTCACTCTTTCACCCACAC 57.674 50.000 0.00 0.00 0.00 3.82
3952 5901 2.026729 TGTTGTCACTCTTTCACCCACA 60.027 45.455 0.00 0.00 0.00 4.17
3953 5902 2.639065 TGTTGTCACTCTTTCACCCAC 58.361 47.619 0.00 0.00 0.00 4.61
3954 5903 3.576078 ATGTTGTCACTCTTTCACCCA 57.424 42.857 0.00 0.00 0.00 4.51
3955 5904 3.632145 ACAATGTTGTCACTCTTTCACCC 59.368 43.478 0.00 0.00 36.50 4.61
3956 5905 4.900635 ACAATGTTGTCACTCTTTCACC 57.099 40.909 0.00 0.00 36.50 4.02
3957 5906 4.500477 GCAACAATGTTGTCACTCTTTCAC 59.500 41.667 24.71 2.61 41.31 3.18
3958 5907 4.398988 AGCAACAATGTTGTCACTCTTTCA 59.601 37.500 24.71 0.00 41.31 2.69
3959 5908 4.925068 AGCAACAATGTTGTCACTCTTTC 58.075 39.130 24.71 7.14 41.31 2.62
3960 5909 4.202050 GGAGCAACAATGTTGTCACTCTTT 60.202 41.667 24.71 3.42 41.31 2.52
3961 5910 3.316308 GGAGCAACAATGTTGTCACTCTT 59.684 43.478 24.71 4.04 41.31 2.85
3962 5911 2.880890 GGAGCAACAATGTTGTCACTCT 59.119 45.455 24.71 14.07 41.31 3.24
3963 5912 2.618241 TGGAGCAACAATGTTGTCACTC 59.382 45.455 24.71 20.89 41.31 3.51
3964 5913 2.620115 CTGGAGCAACAATGTTGTCACT 59.380 45.455 24.71 14.74 41.31 3.41
3965 5914 2.358898 ACTGGAGCAACAATGTTGTCAC 59.641 45.455 24.71 15.67 41.31 3.67
3966 5915 2.618241 GACTGGAGCAACAATGTTGTCA 59.382 45.455 24.71 18.70 41.31 3.58
3967 5916 2.030805 GGACTGGAGCAACAATGTTGTC 60.031 50.000 24.71 19.43 41.31 3.18
3968 5917 1.956477 GGACTGGAGCAACAATGTTGT 59.044 47.619 24.71 13.16 44.72 3.32
3969 5918 1.955778 TGGACTGGAGCAACAATGTTG 59.044 47.619 20.77 20.77 0.00 3.33
3970 5919 2.363306 TGGACTGGAGCAACAATGTT 57.637 45.000 0.00 0.00 0.00 2.71
3971 5920 2.363306 TTGGACTGGAGCAACAATGT 57.637 45.000 0.00 0.00 0.00 2.71
3972 5921 3.581755 CAATTGGACTGGAGCAACAATG 58.418 45.455 0.00 0.00 32.60 2.82
3973 5922 2.028748 GCAATTGGACTGGAGCAACAAT 60.029 45.455 7.72 0.00 33.55 2.71
3974 5923 1.340889 GCAATTGGACTGGAGCAACAA 59.659 47.619 7.72 0.00 0.00 2.83
3975 5924 0.961019 GCAATTGGACTGGAGCAACA 59.039 50.000 7.72 0.00 0.00 3.33
3976 5925 0.961019 TGCAATTGGACTGGAGCAAC 59.039 50.000 7.72 0.00 0.00 4.17
3977 5926 1.250328 CTGCAATTGGACTGGAGCAA 58.750 50.000 7.72 0.00 0.00 3.91
3978 5927 2.951269 CTGCAATTGGACTGGAGCA 58.049 52.632 7.72 0.00 0.00 4.26
3980 5929 1.318158 GGGCTGCAATTGGACTGGAG 61.318 60.000 7.72 0.00 35.51 3.86
3981 5930 1.304381 GGGCTGCAATTGGACTGGA 60.304 57.895 7.72 0.00 0.00 3.86
3982 5931 2.703798 CGGGCTGCAATTGGACTGG 61.704 63.158 7.72 0.00 0.00 4.00
3983 5932 1.526575 AACGGGCTGCAATTGGACTG 61.527 55.000 7.72 0.98 0.00 3.51
3984 5933 0.827507 AAACGGGCTGCAATTGGACT 60.828 50.000 7.72 0.00 0.00 3.85
3985 5934 0.885196 TAAACGGGCTGCAATTGGAC 59.115 50.000 7.72 0.00 0.00 4.02
3986 5935 1.748493 GATAAACGGGCTGCAATTGGA 59.252 47.619 7.72 2.96 0.00 3.53
3987 5936 1.476085 TGATAAACGGGCTGCAATTGG 59.524 47.619 7.72 0.00 0.00 3.16
3988 5937 2.937469 TGATAAACGGGCTGCAATTG 57.063 45.000 0.00 0.00 0.00 2.32
3989 5938 3.258123 ACTTTGATAAACGGGCTGCAATT 59.742 39.130 0.50 0.00 0.00 2.32
3990 5939 2.825532 ACTTTGATAAACGGGCTGCAAT 59.174 40.909 0.50 0.00 0.00 3.56
3991 5940 2.227865 GACTTTGATAAACGGGCTGCAA 59.772 45.455 0.50 0.00 0.00 4.08
3992 5941 1.810151 GACTTTGATAAACGGGCTGCA 59.190 47.619 0.50 0.00 0.00 4.41
3993 5942 2.084546 AGACTTTGATAAACGGGCTGC 58.915 47.619 0.00 0.00 0.00 5.25
3994 5943 4.766404 AAAGACTTTGATAAACGGGCTG 57.234 40.909 0.00 0.00 0.00 4.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.