Multiple sequence alignment - TraesCS3B01G578900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G578900 chr3B 100.000 2398 0 0 1 2398 808027931 808030328 0.000000e+00 4429.0
1 TraesCS3B01G578900 chr3B 92.205 898 69 1 1502 2398 733416792 733417689 0.000000e+00 1269.0
2 TraesCS3B01G578900 chr3B 92.090 885 69 1 1515 2398 737350539 737351423 0.000000e+00 1245.0
3 TraesCS3B01G578900 chr3B 87.023 262 29 2 552 809 199057263 199057003 8.390000e-75 291.0
4 TraesCS3B01G578900 chr3D 95.372 886 39 2 1514 2398 28270807 28271691 0.000000e+00 1408.0
5 TraesCS3B01G578900 chr3D 95.652 276 11 1 1 275 607246055 607246330 2.190000e-120 442.0
6 TraesCS3B01G578900 chr3A 93.574 887 56 1 1512 2398 363408865 363409750 0.000000e+00 1321.0
7 TraesCS3B01G578900 chr3A 92.045 704 36 8 813 1510 730619003 730619692 0.000000e+00 972.0
8 TraesCS3B01G578900 chr3A 90.476 105 9 1 448 552 730618902 730619005 1.160000e-28 137.0
9 TraesCS3B01G578900 chr7B 92.817 891 59 2 1513 2398 583991729 583990839 0.000000e+00 1286.0
10 TraesCS3B01G578900 chr7B 87.059 255 33 0 552 806 431976521 431976775 3.020000e-74 289.0
11 TraesCS3B01G578900 chr7B 86.275 255 35 0 552 806 677406265 677406519 6.530000e-71 278.0
12 TraesCS3B01G578900 chr5A 92.688 889 61 3 1512 2398 564663648 564662762 0.000000e+00 1279.0
13 TraesCS3B01G578900 chr1B 92.664 886 63 2 1514 2398 437836418 437835534 0.000000e+00 1275.0
14 TraesCS3B01G578900 chr6B 92.559 887 63 3 1514 2398 714187047 714186162 0.000000e+00 1269.0
15 TraesCS3B01G578900 chr4A 92.630 882 61 4 1518 2398 191137765 191136887 0.000000e+00 1266.0
16 TraesCS3B01G578900 chr4A 91.489 47 4 0 277 323 30312321 30312367 5.530000e-07 65.8
17 TraesCS3B01G578900 chr4D 96.377 276 9 1 1 275 88944170 88944445 1.010000e-123 453.0
18 TraesCS3B01G578900 chr4D 83.333 258 41 2 552 809 476879337 476879082 1.110000e-58 237.0
19 TraesCS3B01G578900 chr5D 95.307 277 12 1 1 276 387722773 387723049 2.830000e-119 438.0
20 TraesCS3B01G578900 chr5D 95.604 273 11 1 4 275 349183888 349183616 1.020000e-118 436.0
21 TraesCS3B01G578900 chr5B 95.307 277 11 2 1 275 409444594 409444870 2.830000e-119 438.0
22 TraesCS3B01G578900 chr5B 94.946 277 13 1 1 276 481135938 481135662 1.320000e-117 433.0
23 TraesCS3B01G578900 chr7D 95.290 276 12 1 1 275 46701538 46701813 1.020000e-118 436.0
24 TraesCS3B01G578900 chr7D 84.825 257 35 3 554 806 591013004 591013260 3.060000e-64 255.0
25 TraesCS3B01G578900 chr2D 95.290 276 12 1 1 275 21191653 21191378 1.020000e-118 436.0
26 TraesCS3B01G578900 chr6D 94.346 283 14 2 1 281 22088534 22088816 1.320000e-117 433.0
27 TraesCS3B01G578900 chr7A 83.846 260 42 0 550 809 706368499 706368240 5.120000e-62 248.0
28 TraesCS3B01G578900 chr2B 83.774 265 38 5 549 809 511768260 511767997 1.840000e-61 246.0
29 TraesCS3B01G578900 chr2B 100.000 29 0 0 283 311 475128710 475128682 1.000000e-03 54.7
30 TraesCS3B01G578900 chr6A 82.879 257 40 4 552 806 525619817 525620071 6.670000e-56 228.0
31 TraesCS3B01G578900 chr4B 82.510 263 42 4 544 803 200096918 200097179 6.670000e-56 228.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G578900 chr3B 808027931 808030328 2397 False 4429.0 4429 100.0000 1 2398 1 chr3B.!!$F3 2397
1 TraesCS3B01G578900 chr3B 733416792 733417689 897 False 1269.0 1269 92.2050 1502 2398 1 chr3B.!!$F1 896
2 TraesCS3B01G578900 chr3B 737350539 737351423 884 False 1245.0 1245 92.0900 1515 2398 1 chr3B.!!$F2 883
3 TraesCS3B01G578900 chr3D 28270807 28271691 884 False 1408.0 1408 95.3720 1514 2398 1 chr3D.!!$F1 884
4 TraesCS3B01G578900 chr3A 363408865 363409750 885 False 1321.0 1321 93.5740 1512 2398 1 chr3A.!!$F1 886
5 TraesCS3B01G578900 chr3A 730618902 730619692 790 False 554.5 972 91.2605 448 1510 2 chr3A.!!$F2 1062
6 TraesCS3B01G578900 chr7B 583990839 583991729 890 True 1286.0 1286 92.8170 1513 2398 1 chr7B.!!$R1 885
7 TraesCS3B01G578900 chr5A 564662762 564663648 886 True 1279.0 1279 92.6880 1512 2398 1 chr5A.!!$R1 886
8 TraesCS3B01G578900 chr1B 437835534 437836418 884 True 1275.0 1275 92.6640 1514 2398 1 chr1B.!!$R1 884
9 TraesCS3B01G578900 chr6B 714186162 714187047 885 True 1269.0 1269 92.5590 1514 2398 1 chr6B.!!$R1 884
10 TraesCS3B01G578900 chr4A 191136887 191137765 878 True 1266.0 1266 92.6300 1518 2398 1 chr4A.!!$R1 880

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
126 127 0.034767 GCCACCACCCCTTTAGTACC 60.035 60.0 0.00 0.0 0.0 3.34 F
238 239 0.037697 GGCCAAAATTGAACCGGGAC 60.038 55.0 6.32 0.0 0.0 4.46 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1113 1114 0.520404 GAAGCACTGTCACCAGCATG 59.480 55.0 0.00 0.0 42.81 4.06 R
2053 2062 0.617935 TGATTGTCCCATGGCGAAGA 59.382 50.0 6.09 0.0 0.00 2.87 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.612412 GTCCCGGTTCGTGGCACA 62.612 66.667 19.09 1.83 0.00 4.57
18 19 3.862991 TCCCGGTTCGTGGCACAA 61.863 61.111 19.09 8.34 44.16 3.33
19 20 2.902846 CCCGGTTCGTGGCACAAA 60.903 61.111 19.09 1.67 44.16 2.83
20 21 2.330041 CCGGTTCGTGGCACAAAC 59.670 61.111 19.09 15.95 44.16 2.93
21 22 2.330041 CGGTTCGTGGCACAAACC 59.670 61.111 26.87 26.87 43.63 3.27
22 23 2.330041 GGTTCGTGGCACAAACCG 59.670 61.111 23.48 6.41 44.16 4.44
23 24 2.330041 GTTCGTGGCACAAACCGG 59.670 61.111 19.09 0.00 44.16 5.28
24 25 2.124653 TTCGTGGCACAAACCGGT 60.125 55.556 19.09 0.00 44.16 5.28
25 26 1.145598 TTCGTGGCACAAACCGGTA 59.854 52.632 19.09 0.00 44.16 4.02
26 27 1.159098 TTCGTGGCACAAACCGGTAC 61.159 55.000 19.09 0.00 44.16 3.34
27 28 1.595929 CGTGGCACAAACCGGTACT 60.596 57.895 19.09 0.00 44.16 2.73
28 29 0.319727 CGTGGCACAAACCGGTACTA 60.320 55.000 19.09 0.00 44.16 1.82
29 30 1.873069 CGTGGCACAAACCGGTACTAA 60.873 52.381 19.09 0.00 44.16 2.24
30 31 2.220313 GTGGCACAAACCGGTACTAAA 58.780 47.619 8.00 0.00 44.16 1.85
31 32 2.224784 GTGGCACAAACCGGTACTAAAG 59.775 50.000 8.00 0.00 44.16 1.85
32 33 2.158784 TGGCACAAACCGGTACTAAAGT 60.159 45.455 8.00 0.00 31.92 2.66
33 34 2.880268 GGCACAAACCGGTACTAAAGTT 59.120 45.455 8.00 0.00 0.00 2.66
34 35 4.064388 GGCACAAACCGGTACTAAAGTTA 58.936 43.478 8.00 0.00 0.00 2.24
35 36 4.152938 GGCACAAACCGGTACTAAAGTTAG 59.847 45.833 8.00 0.00 36.82 2.34
36 37 4.377738 GCACAAACCGGTACTAAAGTTAGC 60.378 45.833 8.00 0.54 34.09 3.09
37 38 4.152938 CACAAACCGGTACTAAAGTTAGCC 59.847 45.833 8.00 0.00 34.09 3.93
38 39 3.616956 AACCGGTACTAAAGTTAGCCC 57.383 47.619 8.00 0.00 34.09 5.19
39 40 2.825223 ACCGGTACTAAAGTTAGCCCT 58.175 47.619 4.49 0.00 34.09 5.19
40 41 3.176411 ACCGGTACTAAAGTTAGCCCTT 58.824 45.455 4.49 0.00 34.09 3.95
41 42 3.584406 ACCGGTACTAAAGTTAGCCCTTT 59.416 43.478 4.49 0.00 38.23 3.11
42 43 4.777366 ACCGGTACTAAAGTTAGCCCTTTA 59.223 41.667 4.49 0.00 36.18 1.85
49 50 3.900966 AAGTTAGCCCTTTAGTACCGG 57.099 47.619 0.00 0.00 0.00 5.28
50 51 2.825223 AGTTAGCCCTTTAGTACCGGT 58.175 47.619 13.98 13.98 0.00 5.28
51 52 3.176411 AGTTAGCCCTTTAGTACCGGTT 58.824 45.455 15.04 0.00 0.00 4.44
52 53 3.584406 AGTTAGCCCTTTAGTACCGGTTT 59.416 43.478 15.04 4.12 0.00 3.27
53 54 2.484742 AGCCCTTTAGTACCGGTTTG 57.515 50.000 15.04 0.00 0.00 2.93
54 55 1.701292 AGCCCTTTAGTACCGGTTTGT 59.299 47.619 15.04 0.00 0.00 2.83
55 56 1.808343 GCCCTTTAGTACCGGTTTGTG 59.192 52.381 15.04 0.00 0.00 3.33
56 57 2.811504 GCCCTTTAGTACCGGTTTGTGT 60.812 50.000 15.04 0.00 0.00 3.72
57 58 3.069289 CCCTTTAGTACCGGTTTGTGTC 58.931 50.000 15.04 0.00 0.00 3.67
58 59 3.494749 CCCTTTAGTACCGGTTTGTGTCA 60.495 47.826 15.04 0.00 0.00 3.58
59 60 4.128643 CCTTTAGTACCGGTTTGTGTCAA 58.871 43.478 15.04 0.00 0.00 3.18
60 61 4.212636 CCTTTAGTACCGGTTTGTGTCAAG 59.787 45.833 15.04 6.49 0.00 3.02
61 62 4.669206 TTAGTACCGGTTTGTGTCAAGA 57.331 40.909 15.04 0.00 0.00 3.02
62 63 3.547054 AGTACCGGTTTGTGTCAAGAA 57.453 42.857 15.04 0.00 0.00 2.52
63 64 4.081322 AGTACCGGTTTGTGTCAAGAAT 57.919 40.909 15.04 0.00 0.00 2.40
64 65 4.062991 AGTACCGGTTTGTGTCAAGAATC 58.937 43.478 15.04 0.00 0.00 2.52
65 66 1.871039 ACCGGTTTGTGTCAAGAATCG 59.129 47.619 0.00 0.00 0.00 3.34
66 67 1.196808 CCGGTTTGTGTCAAGAATCGG 59.803 52.381 6.71 6.71 0.00 4.18
67 68 1.196808 CGGTTTGTGTCAAGAATCGGG 59.803 52.381 0.00 0.00 0.00 5.14
68 69 2.500229 GGTTTGTGTCAAGAATCGGGA 58.500 47.619 0.00 0.00 0.00 5.14
69 70 2.225727 GGTTTGTGTCAAGAATCGGGAC 59.774 50.000 1.35 1.35 0.00 4.46
70 71 3.139077 GTTTGTGTCAAGAATCGGGACT 58.861 45.455 8.36 0.00 32.84 3.85
71 72 4.312443 GTTTGTGTCAAGAATCGGGACTA 58.688 43.478 8.36 0.00 32.84 2.59
72 73 4.610605 TTGTGTCAAGAATCGGGACTAA 57.389 40.909 8.36 2.81 32.84 2.24
73 74 4.610605 TGTGTCAAGAATCGGGACTAAA 57.389 40.909 8.36 0.00 32.84 1.85
74 75 4.566004 TGTGTCAAGAATCGGGACTAAAG 58.434 43.478 8.36 0.00 32.84 1.85
75 76 3.933332 GTGTCAAGAATCGGGACTAAAGG 59.067 47.826 8.36 0.00 32.84 3.11
76 77 3.055385 TGTCAAGAATCGGGACTAAAGGG 60.055 47.826 8.36 0.00 32.84 3.95
77 78 2.504175 TCAAGAATCGGGACTAAAGGGG 59.496 50.000 0.00 0.00 0.00 4.79
78 79 0.837940 AGAATCGGGACTAAAGGGGC 59.162 55.000 0.00 0.00 0.00 5.80
79 80 0.837940 GAATCGGGACTAAAGGGGCT 59.162 55.000 0.00 0.00 0.00 5.19
80 81 0.837940 AATCGGGACTAAAGGGGCTC 59.162 55.000 0.00 0.00 0.00 4.70
81 82 1.400530 ATCGGGACTAAAGGGGCTCG 61.401 60.000 0.00 0.00 0.00 5.03
82 83 2.356780 CGGGACTAAAGGGGCTCGT 61.357 63.158 0.00 0.00 0.00 4.18
83 84 1.221021 GGGACTAAAGGGGCTCGTG 59.779 63.158 0.00 0.00 0.00 4.35
84 85 1.221021 GGACTAAAGGGGCTCGTGG 59.779 63.158 0.00 0.00 0.00 4.94
85 86 1.221021 GACTAAAGGGGCTCGTGGG 59.779 63.158 0.00 0.00 0.00 4.61
86 87 2.253403 GACTAAAGGGGCTCGTGGGG 62.253 65.000 0.00 0.00 0.00 4.96
87 88 3.699134 CTAAAGGGGCTCGTGGGGC 62.699 68.421 0.00 0.00 0.00 5.80
120 121 4.621087 GCCTGCCACCACCCCTTT 62.621 66.667 0.00 0.00 0.00 3.11
121 122 3.176297 CCTGCCACCACCCCTTTA 58.824 61.111 0.00 0.00 0.00 1.85
122 123 1.000896 CCTGCCACCACCCCTTTAG 60.001 63.158 0.00 0.00 0.00 1.85
123 124 1.767692 CTGCCACCACCCCTTTAGT 59.232 57.895 0.00 0.00 0.00 2.24
124 125 0.988832 CTGCCACCACCCCTTTAGTA 59.011 55.000 0.00 0.00 0.00 1.82
125 126 0.694196 TGCCACCACCCCTTTAGTAC 59.306 55.000 0.00 0.00 0.00 2.73
126 127 0.034767 GCCACCACCCCTTTAGTACC 60.035 60.000 0.00 0.00 0.00 3.34
127 128 0.251073 CCACCACCCCTTTAGTACCG 59.749 60.000 0.00 0.00 0.00 4.02
128 129 0.251073 CACCACCCCTTTAGTACCGG 59.749 60.000 0.00 0.00 0.00 5.28
129 130 0.178894 ACCACCCCTTTAGTACCGGT 60.179 55.000 13.98 13.98 0.00 5.28
130 131 0.986527 CCACCCCTTTAGTACCGGTT 59.013 55.000 15.04 0.00 0.00 4.44
131 132 1.065926 CCACCCCTTTAGTACCGGTTC 60.066 57.143 15.04 8.12 0.00 3.62
132 133 0.897621 ACCCCTTTAGTACCGGTTCG 59.102 55.000 15.04 0.00 0.00 3.95
133 134 0.897621 CCCCTTTAGTACCGGTTCGT 59.102 55.000 15.04 0.00 0.00 3.85
134 135 1.404583 CCCCTTTAGTACCGGTTCGTG 60.405 57.143 15.04 0.51 0.00 4.35
135 136 1.404583 CCCTTTAGTACCGGTTCGTGG 60.405 57.143 15.04 9.90 0.00 4.94
136 137 1.353076 CTTTAGTACCGGTTCGTGGC 58.647 55.000 15.04 0.00 0.00 5.01
137 138 0.678395 TTTAGTACCGGTTCGTGGCA 59.322 50.000 15.04 0.00 0.00 4.92
138 139 0.038343 TTAGTACCGGTTCGTGGCAC 60.038 55.000 15.04 7.79 0.00 5.01
139 140 2.198906 TAGTACCGGTTCGTGGCACG 62.199 60.000 32.75 32.75 44.19 5.34
148 149 3.107661 CGTGGCACGAACCGGTAC 61.108 66.667 34.85 0.00 46.05 3.34
149 150 2.341176 GTGGCACGAACCGGTACT 59.659 61.111 8.00 0.00 0.00 2.73
150 151 1.586028 GTGGCACGAACCGGTACTA 59.414 57.895 8.00 0.00 0.00 1.82
151 152 0.038343 GTGGCACGAACCGGTACTAA 60.038 55.000 8.00 0.00 0.00 2.24
152 153 0.678395 TGGCACGAACCGGTACTAAA 59.322 50.000 8.00 0.00 0.00 1.85
153 154 1.337074 TGGCACGAACCGGTACTAAAG 60.337 52.381 8.00 0.00 0.00 1.85
154 155 1.353076 GCACGAACCGGTACTAAAGG 58.647 55.000 8.00 0.00 0.00 3.11
155 156 1.337167 GCACGAACCGGTACTAAAGGT 60.337 52.381 8.00 0.00 40.50 3.50
161 162 4.420522 AACCGGTACTAAAGGTTCAACA 57.579 40.909 8.00 0.00 44.13 3.33
162 163 3.732212 ACCGGTACTAAAGGTTCAACAC 58.268 45.455 4.49 0.00 33.96 3.32
163 164 2.733026 CCGGTACTAAAGGTTCAACACG 59.267 50.000 0.00 0.00 0.00 4.49
164 165 3.552684 CCGGTACTAAAGGTTCAACACGA 60.553 47.826 0.00 0.00 0.00 4.35
165 166 4.050553 CGGTACTAAAGGTTCAACACGAA 58.949 43.478 0.00 0.00 0.00 3.85
172 173 4.466133 TTCAACACGAACCGGCAT 57.534 50.000 0.00 0.00 0.00 4.40
173 174 2.709170 TTCAACACGAACCGGCATT 58.291 47.368 0.00 0.00 0.00 3.56
174 175 1.880271 TTCAACACGAACCGGCATTA 58.120 45.000 0.00 0.00 0.00 1.90
175 176 1.880271 TCAACACGAACCGGCATTAA 58.120 45.000 0.00 0.00 0.00 1.40
176 177 1.532007 TCAACACGAACCGGCATTAAC 59.468 47.619 0.00 0.00 0.00 2.01
177 178 0.513820 AACACGAACCGGCATTAACG 59.486 50.000 0.00 0.85 0.00 3.18
178 179 1.225908 CACGAACCGGCATTAACGC 60.226 57.895 0.00 0.00 0.00 4.84
179 180 1.668472 ACGAACCGGCATTAACGCA 60.668 52.632 0.00 0.00 0.00 5.24
180 181 1.022451 ACGAACCGGCATTAACGCAT 61.022 50.000 0.00 0.00 0.00 4.73
181 182 0.931702 CGAACCGGCATTAACGCATA 59.068 50.000 0.00 0.00 0.00 3.14
182 183 1.070843 CGAACCGGCATTAACGCATAG 60.071 52.381 0.00 0.00 0.00 2.23
183 184 0.661020 AACCGGCATTAACGCATAGC 59.339 50.000 0.00 0.00 0.00 2.97
184 185 1.164041 ACCGGCATTAACGCATAGCC 61.164 55.000 0.00 0.00 41.86 3.93
186 187 2.317230 GGCATTAACGCATAGCCGT 58.683 52.632 0.00 0.00 44.41 5.68
192 193 3.776656 ACGCATAGCCGTTCGAAC 58.223 55.556 18.47 18.47 38.47 3.95
193 194 1.808390 ACGCATAGCCGTTCGAACC 60.808 57.895 22.07 9.45 38.47 3.62
194 195 2.856346 CGCATAGCCGTTCGAACCG 61.856 63.158 22.07 16.66 0.00 4.44
196 197 1.881252 CATAGCCGTTCGAACCGGG 60.881 63.158 28.14 22.63 45.57 5.73
197 198 2.053865 ATAGCCGTTCGAACCGGGA 61.054 57.895 28.14 13.30 45.57 5.14
198 199 2.288788 ATAGCCGTTCGAACCGGGAC 62.289 60.000 28.14 18.22 45.57 4.46
199 200 4.368543 GCCGTTCGAACCGGGACT 62.369 66.667 28.14 0.00 45.57 3.85
200 201 2.993471 GCCGTTCGAACCGGGACTA 61.993 63.158 28.14 0.00 45.57 2.59
201 202 1.586028 CCGTTCGAACCGGGACTAA 59.414 57.895 22.07 0.00 41.78 2.24
202 203 0.174162 CCGTTCGAACCGGGACTAAT 59.826 55.000 22.07 0.00 41.78 1.73
203 204 1.274596 CGTTCGAACCGGGACTAATG 58.725 55.000 22.07 0.54 0.00 1.90
204 205 1.648504 GTTCGAACCGGGACTAATGG 58.351 55.000 17.68 0.00 0.00 3.16
205 206 1.066645 GTTCGAACCGGGACTAATGGT 60.067 52.381 17.68 0.00 37.68 3.55
206 207 2.142356 TCGAACCGGGACTAATGGTA 57.858 50.000 6.32 0.00 34.11 3.25
207 208 1.750778 TCGAACCGGGACTAATGGTAC 59.249 52.381 6.32 0.00 34.11 3.34
208 209 1.202452 CGAACCGGGACTAATGGTACC 60.202 57.143 6.32 4.43 45.48 3.34
222 223 3.995526 GTACCATTAGTACCGGGCC 57.004 57.895 6.32 0.00 44.85 5.80
223 224 1.122227 GTACCATTAGTACCGGGCCA 58.878 55.000 6.32 0.00 44.85 5.36
224 225 1.485895 GTACCATTAGTACCGGGCCAA 59.514 52.381 6.32 0.00 44.85 4.52
225 226 0.993470 ACCATTAGTACCGGGCCAAA 59.007 50.000 6.32 0.00 0.00 3.28
226 227 1.355043 ACCATTAGTACCGGGCCAAAA 59.645 47.619 6.32 0.00 0.00 2.44
227 228 2.024751 ACCATTAGTACCGGGCCAAAAT 60.025 45.455 6.32 0.00 0.00 1.82
228 229 3.028130 CCATTAGTACCGGGCCAAAATT 58.972 45.455 6.32 0.00 0.00 1.82
229 230 3.181480 CCATTAGTACCGGGCCAAAATTG 60.181 47.826 6.32 0.00 0.00 2.32
230 231 3.436577 TTAGTACCGGGCCAAAATTGA 57.563 42.857 6.32 0.00 0.00 2.57
231 232 2.296073 AGTACCGGGCCAAAATTGAA 57.704 45.000 6.32 0.00 0.00 2.69
232 233 1.890489 AGTACCGGGCCAAAATTGAAC 59.110 47.619 6.32 0.00 0.00 3.18
233 234 1.067425 GTACCGGGCCAAAATTGAACC 60.067 52.381 6.32 0.00 0.00 3.62
234 235 1.080161 CCGGGCCAAAATTGAACCG 60.080 57.895 4.39 16.39 42.65 4.44
235 236 1.080161 CGGGCCAAAATTGAACCGG 60.080 57.895 4.39 0.00 40.81 5.28
236 237 1.295101 GGGCCAAAATTGAACCGGG 59.705 57.895 6.32 0.00 0.00 5.73
237 238 1.188871 GGGCCAAAATTGAACCGGGA 61.189 55.000 6.32 0.00 0.00 5.14
238 239 0.037697 GGCCAAAATTGAACCGGGAC 60.038 55.000 6.32 0.00 0.00 4.46
239 240 0.966179 GCCAAAATTGAACCGGGACT 59.034 50.000 6.32 0.00 0.00 3.85
240 241 2.164338 GCCAAAATTGAACCGGGACTA 58.836 47.619 6.32 0.00 0.00 2.59
241 242 2.559231 GCCAAAATTGAACCGGGACTAA 59.441 45.455 6.32 0.00 0.00 2.24
242 243 3.194755 GCCAAAATTGAACCGGGACTAAT 59.805 43.478 6.32 0.00 0.00 1.73
243 244 4.743493 CCAAAATTGAACCGGGACTAATG 58.257 43.478 6.32 0.00 0.00 1.90
244 245 4.219725 CCAAAATTGAACCGGGACTAATGT 59.780 41.667 6.32 0.00 0.00 2.71
245 246 5.160641 CAAAATTGAACCGGGACTAATGTG 58.839 41.667 6.32 0.30 0.00 3.21
246 247 3.713826 ATTGAACCGGGACTAATGTGT 57.286 42.857 6.32 0.00 0.00 3.72
247 248 2.754946 TGAACCGGGACTAATGTGTC 57.245 50.000 6.32 0.00 36.31 3.67
248 249 2.253610 TGAACCGGGACTAATGTGTCT 58.746 47.619 6.32 0.00 37.16 3.41
249 250 2.232941 TGAACCGGGACTAATGTGTCTC 59.767 50.000 6.32 0.00 37.16 3.36
250 251 1.933021 ACCGGGACTAATGTGTCTCA 58.067 50.000 6.32 0.00 37.29 3.27
251 252 1.549170 ACCGGGACTAATGTGTCTCAC 59.451 52.381 6.32 0.00 37.29 3.51
263 264 4.974645 TGTGTCTCACATTAGGTCCTTT 57.025 40.909 0.00 0.00 39.62 3.11
264 265 5.304686 TGTGTCTCACATTAGGTCCTTTT 57.695 39.130 0.00 0.00 39.62 2.27
265 266 5.690865 TGTGTCTCACATTAGGTCCTTTTT 58.309 37.500 0.00 0.00 39.62 1.94
266 267 5.763204 TGTGTCTCACATTAGGTCCTTTTTC 59.237 40.000 0.00 0.00 39.62 2.29
267 268 5.998363 GTGTCTCACATTAGGTCCTTTTTCT 59.002 40.000 0.00 0.00 34.08 2.52
268 269 7.159372 GTGTCTCACATTAGGTCCTTTTTCTA 58.841 38.462 0.00 0.00 34.08 2.10
269 270 7.117956 GTGTCTCACATTAGGTCCTTTTTCTAC 59.882 40.741 0.00 0.00 34.08 2.59
270 271 7.016268 TGTCTCACATTAGGTCCTTTTTCTACT 59.984 37.037 0.00 0.00 0.00 2.57
271 272 8.529476 GTCTCACATTAGGTCCTTTTTCTACTA 58.471 37.037 0.00 0.00 0.00 1.82
272 273 8.750298 TCTCACATTAGGTCCTTTTTCTACTAG 58.250 37.037 0.00 0.00 0.00 2.57
273 274 8.431910 TCACATTAGGTCCTTTTTCTACTAGT 57.568 34.615 0.00 0.00 0.00 2.57
274 275 8.311836 TCACATTAGGTCCTTTTTCTACTAGTG 58.688 37.037 5.39 0.00 0.00 2.74
275 276 8.095169 CACATTAGGTCCTTTTTCTACTAGTGT 58.905 37.037 5.39 0.00 33.52 3.55
276 277 8.312564 ACATTAGGTCCTTTTTCTACTAGTGTC 58.687 37.037 5.39 0.00 29.21 3.67
277 278 8.532819 CATTAGGTCCTTTTTCTACTAGTGTCT 58.467 37.037 5.39 0.00 0.00 3.41
278 279 6.593268 AGGTCCTTTTTCTACTAGTGTCTC 57.407 41.667 5.39 0.00 0.00 3.36
279 280 6.075984 AGGTCCTTTTTCTACTAGTGTCTCA 58.924 40.000 5.39 0.00 0.00 3.27
280 281 6.553852 AGGTCCTTTTTCTACTAGTGTCTCAA 59.446 38.462 5.39 0.00 0.00 3.02
281 282 6.645827 GGTCCTTTTTCTACTAGTGTCTCAAC 59.354 42.308 5.39 0.00 0.00 3.18
282 283 7.208080 GTCCTTTTTCTACTAGTGTCTCAACA 58.792 38.462 5.39 0.00 0.00 3.33
283 284 7.709613 GTCCTTTTTCTACTAGTGTCTCAACAA 59.290 37.037 5.39 0.00 37.08 2.83
284 285 8.262227 TCCTTTTTCTACTAGTGTCTCAACAAA 58.738 33.333 5.39 0.00 37.08 2.83
285 286 8.889717 CCTTTTTCTACTAGTGTCTCAACAAAA 58.110 33.333 5.39 0.00 37.08 2.44
318 319 9.881649 AATTGACATGTATGATACTAGCTATGG 57.118 33.333 0.00 0.00 0.00 2.74
319 320 8.422577 TTGACATGTATGATACTAGCTATGGT 57.577 34.615 0.00 0.00 0.00 3.55
320 321 9.528489 TTGACATGTATGATACTAGCTATGGTA 57.472 33.333 0.00 0.00 0.00 3.25
321 322 8.957466 TGACATGTATGATACTAGCTATGGTAC 58.043 37.037 0.00 0.00 0.00 3.34
322 323 9.179909 GACATGTATGATACTAGCTATGGTACT 57.820 37.037 0.00 0.00 0.00 2.73
323 324 9.179909 ACATGTATGATACTAGCTATGGTACTC 57.820 37.037 0.00 0.00 0.00 2.59
324 325 8.625651 CATGTATGATACTAGCTATGGTACTCC 58.374 40.741 4.03 0.00 0.00 3.85
325 326 7.117397 TGTATGATACTAGCTATGGTACTCCC 58.883 42.308 4.03 0.00 0.00 4.30
340 341 7.260387 TGGTACTCCCATTGTAACAATAAGA 57.740 36.000 0.00 0.00 38.72 2.10
341 342 7.867921 TGGTACTCCCATTGTAACAATAAGAT 58.132 34.615 0.00 0.00 38.72 2.40
342 343 8.994500 TGGTACTCCCATTGTAACAATAAGATA 58.006 33.333 0.00 0.00 38.72 1.98
343 344 9.269453 GGTACTCCCATTGTAACAATAAGATAC 57.731 37.037 0.00 0.00 0.00 2.24
344 345 9.826574 GTACTCCCATTGTAACAATAAGATACA 57.173 33.333 0.00 0.00 34.17 2.29
346 347 9.396022 ACTCCCATTGTAACAATAAGATACAAG 57.604 33.333 0.00 0.00 45.04 3.16
347 348 8.220755 TCCCATTGTAACAATAAGATACAAGC 57.779 34.615 0.00 0.00 45.04 4.01
348 349 7.284489 TCCCATTGTAACAATAAGATACAAGCC 59.716 37.037 0.00 0.00 45.04 4.35
349 350 7.068103 CCCATTGTAACAATAAGATACAAGCCA 59.932 37.037 0.00 0.00 45.04 4.75
350 351 8.632679 CCATTGTAACAATAAGATACAAGCCAT 58.367 33.333 0.00 0.00 45.04 4.40
356 357 8.682936 AACAATAAGATACAAGCCATTAGAGG 57.317 34.615 0.00 0.00 0.00 3.69
357 358 8.034313 ACAATAAGATACAAGCCATTAGAGGA 57.966 34.615 0.00 0.00 0.00 3.71
358 359 8.494433 ACAATAAGATACAAGCCATTAGAGGAA 58.506 33.333 0.00 0.00 0.00 3.36
359 360 9.512588 CAATAAGATACAAGCCATTAGAGGAAT 57.487 33.333 0.00 0.00 0.00 3.01
361 362 7.814264 AAGATACAAGCCATTAGAGGAATTG 57.186 36.000 0.00 0.00 34.74 2.32
362 363 6.904626 AGATACAAGCCATTAGAGGAATTGT 58.095 36.000 0.00 0.00 40.74 2.71
363 364 8.034313 AGATACAAGCCATTAGAGGAATTGTA 57.966 34.615 11.20 11.20 41.94 2.41
364 365 8.664079 AGATACAAGCCATTAGAGGAATTGTAT 58.336 33.333 16.87 16.87 45.58 2.29
365 366 8.854614 ATACAAGCCATTAGAGGAATTGTATC 57.145 34.615 13.62 0.00 42.81 2.24
366 367 6.662755 ACAAGCCATTAGAGGAATTGTATCA 58.337 36.000 0.00 0.00 37.94 2.15
367 368 6.769822 ACAAGCCATTAGAGGAATTGTATCAG 59.230 38.462 0.00 0.00 37.94 2.90
368 369 6.753913 AGCCATTAGAGGAATTGTATCAGA 57.246 37.500 0.00 0.00 0.00 3.27
369 370 7.141758 AGCCATTAGAGGAATTGTATCAGAA 57.858 36.000 0.00 0.00 0.00 3.02
370 371 7.753630 AGCCATTAGAGGAATTGTATCAGAAT 58.246 34.615 0.00 0.00 0.00 2.40
371 372 8.884323 AGCCATTAGAGGAATTGTATCAGAATA 58.116 33.333 0.00 0.00 0.00 1.75
372 373 9.678260 GCCATTAGAGGAATTGTATCAGAATAT 57.322 33.333 0.00 0.00 0.00 1.28
414 415 7.658525 TTGTAGATACAATGCATTGGGATTT 57.341 32.000 35.85 25.84 40.93 2.17
415 416 7.041635 TGTAGATACAATGCATTGGGATTTG 57.958 36.000 35.85 16.86 41.96 2.32
416 417 5.540400 AGATACAATGCATTGGGATTTGG 57.460 39.130 35.85 14.61 41.96 3.28
417 418 4.345837 AGATACAATGCATTGGGATTTGGG 59.654 41.667 35.85 13.94 41.96 4.12
418 419 2.549082 ACAATGCATTGGGATTTGGGA 58.451 42.857 35.85 0.00 41.96 4.37
419 420 2.502538 ACAATGCATTGGGATTTGGGAG 59.497 45.455 35.85 12.80 41.96 4.30
420 421 1.125633 ATGCATTGGGATTTGGGAGC 58.874 50.000 0.00 0.00 0.00 4.70
421 422 1.321805 TGCATTGGGATTTGGGAGCG 61.322 55.000 0.00 0.00 0.00 5.03
422 423 1.438814 CATTGGGATTTGGGAGCGC 59.561 57.895 0.00 0.00 0.00 5.92
423 424 1.758122 ATTGGGATTTGGGAGCGCC 60.758 57.895 2.29 0.00 0.00 6.53
445 446 7.683437 GCCCTAGCGTTAATTATTCCTATTT 57.317 36.000 0.00 0.00 0.00 1.40
446 447 8.782339 GCCCTAGCGTTAATTATTCCTATTTA 57.218 34.615 0.00 0.00 0.00 1.40
447 448 9.223099 GCCCTAGCGTTAATTATTCCTATTTAA 57.777 33.333 0.00 0.00 0.00 1.52
525 526 5.123344 ACGTAGTCAATGTTTGCCTATTTCC 59.877 40.000 0.00 0.00 29.74 3.13
536 537 3.711863 TGCCTATTTCCAAAGCAAGGAT 58.288 40.909 0.00 0.00 34.56 3.24
544 545 7.968014 ATTTCCAAAGCAAGGATCTTAGATT 57.032 32.000 0.00 0.00 34.56 2.40
549 550 5.707066 AAGCAAGGATCTTAGATTGGTCT 57.293 39.130 0.00 0.00 38.52 3.85
550 551 6.814954 AAGCAAGGATCTTAGATTGGTCTA 57.185 37.500 0.00 0.00 35.87 2.59
551 552 6.814954 AGCAAGGATCTTAGATTGGTCTAA 57.185 37.500 0.00 0.00 43.02 2.10
559 560 4.755266 TTAGATTGGTCTAAGGCTGGTC 57.245 45.455 0.00 0.00 40.98 4.02
560 561 1.482593 AGATTGGTCTAAGGCTGGTCG 59.517 52.381 0.00 0.00 31.36 4.79
561 562 1.207329 GATTGGTCTAAGGCTGGTCGT 59.793 52.381 0.00 0.00 0.00 4.34
562 563 1.927487 TTGGTCTAAGGCTGGTCGTA 58.073 50.000 0.00 0.00 0.00 3.43
563 564 1.927487 TGGTCTAAGGCTGGTCGTAA 58.073 50.000 0.00 0.00 0.00 3.18
564 565 2.463752 TGGTCTAAGGCTGGTCGTAAT 58.536 47.619 0.00 0.00 0.00 1.89
565 566 2.167693 TGGTCTAAGGCTGGTCGTAATG 59.832 50.000 0.00 0.00 0.00 1.90
566 567 2.483188 GGTCTAAGGCTGGTCGTAATGG 60.483 54.545 0.00 0.00 0.00 3.16
567 568 2.167900 GTCTAAGGCTGGTCGTAATGGT 59.832 50.000 0.00 0.00 0.00 3.55
568 569 3.382546 GTCTAAGGCTGGTCGTAATGGTA 59.617 47.826 0.00 0.00 0.00 3.25
569 570 2.981859 AAGGCTGGTCGTAATGGTAG 57.018 50.000 0.00 0.00 0.00 3.18
570 571 1.861982 AGGCTGGTCGTAATGGTAGT 58.138 50.000 0.00 0.00 0.00 2.73
571 572 3.022557 AGGCTGGTCGTAATGGTAGTA 57.977 47.619 0.00 0.00 0.00 1.82
572 573 3.573695 AGGCTGGTCGTAATGGTAGTAT 58.426 45.455 0.00 0.00 0.00 2.12
573 574 3.573110 AGGCTGGTCGTAATGGTAGTATC 59.427 47.826 0.00 0.00 0.00 2.24
574 575 3.319972 GGCTGGTCGTAATGGTAGTATCA 59.680 47.826 0.00 0.00 0.00 2.15
575 576 4.021368 GGCTGGTCGTAATGGTAGTATCAT 60.021 45.833 0.00 0.00 0.00 2.45
576 577 5.184479 GGCTGGTCGTAATGGTAGTATCATA 59.816 44.000 0.00 0.00 0.00 2.15
577 578 6.323266 GCTGGTCGTAATGGTAGTATCATAG 58.677 44.000 0.00 0.00 0.00 2.23
578 579 6.625300 GCTGGTCGTAATGGTAGTATCATAGG 60.625 46.154 0.00 0.00 0.00 2.57
579 580 6.309357 TGGTCGTAATGGTAGTATCATAGGT 58.691 40.000 0.00 0.00 0.00 3.08
580 581 7.460910 TGGTCGTAATGGTAGTATCATAGGTA 58.539 38.462 0.00 0.00 0.00 3.08
581 582 7.609146 TGGTCGTAATGGTAGTATCATAGGTAG 59.391 40.741 0.00 0.00 0.00 3.18
582 583 7.609532 GGTCGTAATGGTAGTATCATAGGTAGT 59.390 40.741 0.00 0.00 0.00 2.73
583 584 9.658799 GTCGTAATGGTAGTATCATAGGTAGTA 57.341 37.037 0.00 0.00 0.00 1.82
594 595 9.137459 AGTATCATAGGTAGTATCATACATGCC 57.863 37.037 0.00 0.00 0.00 4.40
595 596 7.978099 ATCATAGGTAGTATCATACATGCCA 57.022 36.000 0.00 0.00 0.00 4.92
596 597 7.790782 TCATAGGTAGTATCATACATGCCAA 57.209 36.000 0.00 0.00 0.00 4.52
597 598 7.611770 TCATAGGTAGTATCATACATGCCAAC 58.388 38.462 0.00 0.00 0.00 3.77
598 599 7.454694 TCATAGGTAGTATCATACATGCCAACT 59.545 37.037 0.00 0.00 0.00 3.16
599 600 8.749354 CATAGGTAGTATCATACATGCCAACTA 58.251 37.037 0.00 0.00 0.00 2.24
600 601 7.612065 AGGTAGTATCATACATGCCAACTAA 57.388 36.000 0.00 0.00 0.00 2.24
601 602 7.671302 AGGTAGTATCATACATGCCAACTAAG 58.329 38.462 0.00 0.00 0.00 2.18
602 603 6.369065 GGTAGTATCATACATGCCAACTAAGC 59.631 42.308 0.00 0.00 0.00 3.09
603 604 5.928976 AGTATCATACATGCCAACTAAGCA 58.071 37.500 0.00 0.00 45.94 3.91
604 605 6.356556 AGTATCATACATGCCAACTAAGCAA 58.643 36.000 0.00 0.00 44.83 3.91
605 606 7.000472 AGTATCATACATGCCAACTAAGCAAT 59.000 34.615 0.00 0.00 44.83 3.56
606 607 6.720112 ATCATACATGCCAACTAAGCAATT 57.280 33.333 0.00 0.00 44.83 2.32
607 608 6.528537 TCATACATGCCAACTAAGCAATTT 57.471 33.333 0.00 0.00 44.83 1.82
608 609 6.934056 TCATACATGCCAACTAAGCAATTTT 58.066 32.000 0.00 0.00 44.83 1.82
609 610 6.812656 TCATACATGCCAACTAAGCAATTTTG 59.187 34.615 0.00 0.00 44.83 2.44
610 611 5.212532 ACATGCCAACTAAGCAATTTTGA 57.787 34.783 0.00 0.00 44.83 2.69
611 612 5.797051 ACATGCCAACTAAGCAATTTTGAT 58.203 33.333 0.00 0.00 44.83 2.57
612 613 5.640357 ACATGCCAACTAAGCAATTTTGATG 59.360 36.000 0.00 0.00 44.83 3.07
613 614 5.465532 TGCCAACTAAGCAATTTTGATGA 57.534 34.783 0.00 0.00 37.28 2.92
614 615 5.472148 TGCCAACTAAGCAATTTTGATGAG 58.528 37.500 0.00 0.00 37.28 2.90
615 616 4.866486 GCCAACTAAGCAATTTTGATGAGG 59.134 41.667 0.00 0.00 29.13 3.86
616 617 5.567423 GCCAACTAAGCAATTTTGATGAGGT 60.567 40.000 0.00 0.00 29.13 3.85
617 618 5.865552 CCAACTAAGCAATTTTGATGAGGTG 59.134 40.000 4.29 4.29 41.42 4.00
618 619 5.649782 ACTAAGCAATTTTGATGAGGTGG 57.350 39.130 0.00 0.00 29.13 4.61
619 620 3.323751 AAGCAATTTTGATGAGGTGGC 57.676 42.857 0.00 0.00 0.00 5.01
620 621 2.250031 AGCAATTTTGATGAGGTGGCA 58.750 42.857 0.00 0.00 0.00 4.92
621 622 2.835764 AGCAATTTTGATGAGGTGGCAT 59.164 40.909 0.00 0.00 0.00 4.40
622 623 4.025360 AGCAATTTTGATGAGGTGGCATA 58.975 39.130 0.00 0.00 0.00 3.14
623 624 4.467082 AGCAATTTTGATGAGGTGGCATAA 59.533 37.500 0.00 0.00 0.00 1.90
624 625 5.046448 AGCAATTTTGATGAGGTGGCATAAA 60.046 36.000 0.00 0.00 0.00 1.40
625 626 5.642919 GCAATTTTGATGAGGTGGCATAAAA 59.357 36.000 0.00 0.00 28.90 1.52
626 627 6.316890 GCAATTTTGATGAGGTGGCATAAAAT 59.683 34.615 0.00 0.00 30.65 1.82
627 628 7.148205 GCAATTTTGATGAGGTGGCATAAAATT 60.148 33.333 0.00 0.00 35.23 1.82
628 629 9.381033 CAATTTTGATGAGGTGGCATAAAATTA 57.619 29.630 0.00 0.00 34.42 1.40
629 630 9.956640 AATTTTGATGAGGTGGCATAAAATTAA 57.043 25.926 0.00 0.00 34.42 1.40
630 631 9.956640 ATTTTGATGAGGTGGCATAAAATTAAA 57.043 25.926 0.00 0.00 30.65 1.52
631 632 9.956640 TTTTGATGAGGTGGCATAAAATTAAAT 57.043 25.926 0.00 0.00 30.65 1.40
632 633 8.945481 TTGATGAGGTGGCATAAAATTAAATG 57.055 30.769 0.00 0.00 0.00 2.32
633 634 8.303780 TGATGAGGTGGCATAAAATTAAATGA 57.696 30.769 0.00 0.00 0.00 2.57
634 635 8.756927 TGATGAGGTGGCATAAAATTAAATGAA 58.243 29.630 0.00 0.00 0.00 2.57
635 636 9.252962 GATGAGGTGGCATAAAATTAAATGAAG 57.747 33.333 0.00 0.00 0.00 3.02
636 637 8.359875 TGAGGTGGCATAAAATTAAATGAAGA 57.640 30.769 0.00 0.00 0.00 2.87
637 638 8.811017 TGAGGTGGCATAAAATTAAATGAAGAA 58.189 29.630 0.00 0.00 0.00 2.52
638 639 9.651913 GAGGTGGCATAAAATTAAATGAAGAAA 57.348 29.630 0.00 0.00 0.00 2.52
639 640 9.657419 AGGTGGCATAAAATTAAATGAAGAAAG 57.343 29.630 0.00 0.00 0.00 2.62
640 641 9.651913 GGTGGCATAAAATTAAATGAAGAAAGA 57.348 29.630 0.00 0.00 0.00 2.52
648 649 9.920133 AAAATTAAATGAAGAAAGAGAGGCTTC 57.080 29.630 0.00 0.00 38.73 3.86
649 650 6.727824 TTAAATGAAGAAAGAGAGGCTTCG 57.272 37.500 0.00 0.00 40.58 3.79
650 651 2.751166 TGAAGAAAGAGAGGCTTCGG 57.249 50.000 0.00 0.00 40.58 4.30
651 652 1.971357 TGAAGAAAGAGAGGCTTCGGT 59.029 47.619 0.00 0.00 40.58 4.69
652 653 3.162666 TGAAGAAAGAGAGGCTTCGGTA 58.837 45.455 0.00 0.00 40.58 4.02
653 654 3.769844 TGAAGAAAGAGAGGCTTCGGTAT 59.230 43.478 0.00 0.00 40.58 2.73
654 655 4.142138 TGAAGAAAGAGAGGCTTCGGTATC 60.142 45.833 0.00 0.00 40.58 2.24
655 656 3.366396 AGAAAGAGAGGCTTCGGTATCA 58.634 45.455 0.00 0.00 35.24 2.15
656 657 3.964031 AGAAAGAGAGGCTTCGGTATCAT 59.036 43.478 0.00 0.00 35.24 2.45
657 658 5.141182 AGAAAGAGAGGCTTCGGTATCATA 58.859 41.667 0.00 0.00 35.24 2.15
658 659 5.777732 AGAAAGAGAGGCTTCGGTATCATAT 59.222 40.000 0.00 0.00 35.24 1.78
659 660 6.268847 AGAAAGAGAGGCTTCGGTATCATATT 59.731 38.462 0.00 0.00 35.24 1.28
660 661 6.426646 AAGAGAGGCTTCGGTATCATATTT 57.573 37.500 0.00 0.00 28.17 1.40
661 662 6.426646 AGAGAGGCTTCGGTATCATATTTT 57.573 37.500 0.00 0.00 0.00 1.82
662 663 6.226787 AGAGAGGCTTCGGTATCATATTTTG 58.773 40.000 0.00 0.00 0.00 2.44
663 664 6.042093 AGAGAGGCTTCGGTATCATATTTTGA 59.958 38.462 0.00 0.00 39.12 2.69
664 665 6.773638 AGAGGCTTCGGTATCATATTTTGAT 58.226 36.000 0.00 0.00 46.86 2.57
665 666 7.907389 AGAGGCTTCGGTATCATATTTTGATA 58.093 34.615 0.00 0.00 43.43 2.15
702 703 9.838975 TTAAATAATGTGCTACTTTGTGTCATG 57.161 29.630 0.00 0.00 0.00 3.07
703 704 3.837213 ATGTGCTACTTTGTGTCATGC 57.163 42.857 0.00 0.00 0.00 4.06
704 705 2.570135 TGTGCTACTTTGTGTCATGCA 58.430 42.857 0.00 0.00 0.00 3.96
705 706 3.148412 TGTGCTACTTTGTGTCATGCAT 58.852 40.909 0.00 0.00 34.18 3.96
706 707 3.189080 TGTGCTACTTTGTGTCATGCATC 59.811 43.478 0.00 0.00 34.18 3.91
707 708 2.416202 TGCTACTTTGTGTCATGCATCG 59.584 45.455 0.00 0.00 0.00 3.84
708 709 2.789092 GCTACTTTGTGTCATGCATCGC 60.789 50.000 0.00 0.00 0.00 4.58
709 710 1.527034 ACTTTGTGTCATGCATCGCT 58.473 45.000 0.00 0.00 0.00 4.93
710 711 2.698803 ACTTTGTGTCATGCATCGCTA 58.301 42.857 0.00 0.00 0.00 4.26
711 712 3.273434 ACTTTGTGTCATGCATCGCTAT 58.727 40.909 0.00 0.00 0.00 2.97
712 713 4.441792 ACTTTGTGTCATGCATCGCTATA 58.558 39.130 0.00 0.00 0.00 1.31
713 714 4.875536 ACTTTGTGTCATGCATCGCTATAA 59.124 37.500 0.00 0.00 0.00 0.98
714 715 5.353956 ACTTTGTGTCATGCATCGCTATAAA 59.646 36.000 0.00 0.00 0.00 1.40
715 716 6.038603 ACTTTGTGTCATGCATCGCTATAAAT 59.961 34.615 0.00 0.00 0.00 1.40
716 717 5.347012 TGTGTCATGCATCGCTATAAATG 57.653 39.130 0.00 0.00 0.00 2.32
717 718 4.815846 TGTGTCATGCATCGCTATAAATGT 59.184 37.500 0.00 0.00 0.00 2.71
718 719 5.988561 TGTGTCATGCATCGCTATAAATGTA 59.011 36.000 0.00 0.00 0.00 2.29
719 720 6.481644 TGTGTCATGCATCGCTATAAATGTAA 59.518 34.615 0.00 0.00 0.00 2.41
720 721 7.173047 TGTGTCATGCATCGCTATAAATGTAAT 59.827 33.333 0.00 0.00 0.00 1.89
721 722 7.689812 GTGTCATGCATCGCTATAAATGTAATC 59.310 37.037 0.00 0.00 0.00 1.75
722 723 7.148423 TGTCATGCATCGCTATAAATGTAATCC 60.148 37.037 0.00 0.00 0.00 3.01
723 724 7.065085 GTCATGCATCGCTATAAATGTAATCCT 59.935 37.037 0.00 0.00 0.00 3.24
724 725 7.607607 TCATGCATCGCTATAAATGTAATCCTT 59.392 33.333 0.00 0.00 0.00 3.36
725 726 7.744087 TGCATCGCTATAAATGTAATCCTTT 57.256 32.000 0.00 0.00 0.00 3.11
726 727 8.840833 TGCATCGCTATAAATGTAATCCTTTA 57.159 30.769 0.00 0.00 0.00 1.85
727 728 9.448438 TGCATCGCTATAAATGTAATCCTTTAT 57.552 29.630 0.00 0.00 33.38 1.40
728 729 9.708222 GCATCGCTATAAATGTAATCCTTTATG 57.292 33.333 0.00 0.00 31.71 1.90
738 739 8.938801 AATGTAATCCTTTATGATACCATGCA 57.061 30.769 0.00 0.00 34.31 3.96
739 740 9.537852 AATGTAATCCTTTATGATACCATGCAT 57.462 29.630 0.00 0.00 34.31 3.96
740 741 8.938801 TGTAATCCTTTATGATACCATGCATT 57.061 30.769 0.00 0.00 34.31 3.56
743 744 7.615582 ATCCTTTATGATACCATGCATTACG 57.384 36.000 0.00 0.00 34.31 3.18
744 745 5.937540 TCCTTTATGATACCATGCATTACGG 59.062 40.000 0.00 0.00 34.31 4.02
745 746 5.937540 CCTTTATGATACCATGCATTACGGA 59.062 40.000 8.47 0.00 34.31 4.69
746 747 6.599244 CCTTTATGATACCATGCATTACGGAT 59.401 38.462 8.47 0.00 34.31 4.18
747 748 7.121168 CCTTTATGATACCATGCATTACGGATT 59.879 37.037 8.47 0.00 34.31 3.01
748 749 7.994425 TTATGATACCATGCATTACGGATTT 57.006 32.000 8.47 0.00 34.31 2.17
749 750 9.508642 TTTATGATACCATGCATTACGGATTTA 57.491 29.630 8.47 0.00 34.31 1.40
750 751 7.615582 ATGATACCATGCATTACGGATTTAG 57.384 36.000 8.47 0.00 0.00 1.85
751 752 6.530120 TGATACCATGCATTACGGATTTAGT 58.470 36.000 8.47 0.00 0.00 2.24
752 753 7.672240 TGATACCATGCATTACGGATTTAGTA 58.328 34.615 8.47 0.00 0.00 1.82
753 754 8.318412 TGATACCATGCATTACGGATTTAGTAT 58.682 33.333 8.47 0.00 0.00 2.12
754 755 8.718102 ATACCATGCATTACGGATTTAGTATC 57.282 34.615 8.47 0.00 0.00 2.24
755 756 6.530120 ACCATGCATTACGGATTTAGTATCA 58.470 36.000 8.47 0.00 0.00 2.15
756 757 7.168219 ACCATGCATTACGGATTTAGTATCAT 58.832 34.615 8.47 0.00 0.00 2.45
757 758 8.318412 ACCATGCATTACGGATTTAGTATCATA 58.682 33.333 8.47 0.00 0.00 2.15
758 759 8.604035 CCATGCATTACGGATTTAGTATCATAC 58.396 37.037 0.00 0.00 0.00 2.39
759 760 9.150348 CATGCATTACGGATTTAGTATCATACA 57.850 33.333 0.00 0.00 0.00 2.29
760 761 8.528917 TGCATTACGGATTTAGTATCATACAC 57.471 34.615 0.00 0.00 0.00 2.90
761 762 8.364894 TGCATTACGGATTTAGTATCATACACT 58.635 33.333 0.00 0.00 0.00 3.55
762 763 8.648097 GCATTACGGATTTAGTATCATACACTG 58.352 37.037 0.00 0.00 0.00 3.66
763 764 9.140286 CATTACGGATTTAGTATCATACACTGG 57.860 37.037 0.00 0.00 0.00 4.00
764 765 6.726490 ACGGATTTAGTATCATACACTGGT 57.274 37.500 0.00 0.00 0.00 4.00
765 766 7.828508 ACGGATTTAGTATCATACACTGGTA 57.171 36.000 0.00 0.00 0.00 3.25
766 767 8.418597 ACGGATTTAGTATCATACACTGGTAT 57.581 34.615 0.00 0.00 40.86 2.73
767 768 8.521176 ACGGATTTAGTATCATACACTGGTATC 58.479 37.037 0.00 0.00 38.14 2.24
768 769 8.520351 CGGATTTAGTATCATACACTGGTATCA 58.480 37.037 0.00 0.00 38.14 2.15
775 776 9.720874 AGTATCATACACTGGTATCATATGGAT 57.279 33.333 2.13 0.00 38.14 3.41
776 777 9.755804 GTATCATACACTGGTATCATATGGATG 57.244 37.037 2.13 6.33 38.14 3.51
777 778 8.613922 ATCATACACTGGTATCATATGGATGA 57.386 34.615 14.63 14.63 46.13 2.92
798 799 9.523168 GGATGATACTAGTATATGATACTCCCC 57.477 40.741 15.42 2.90 0.00 4.81
808 809 9.166222 AGTATATGATACTCCCCATTACAAACA 57.834 33.333 0.00 0.00 0.00 2.83
809 810 9.787435 GTATATGATACTCCCCATTACAAACAA 57.213 33.333 0.00 0.00 0.00 2.83
811 812 9.881773 ATATGATACTCCCCATTACAAACAAAT 57.118 29.630 0.00 0.00 0.00 2.32
904 905 7.865530 TTCTAATTCCATATGCTACCACCTA 57.134 36.000 0.00 0.00 0.00 3.08
910 911 6.852420 TCCATATGCTACCACCTATAACTC 57.148 41.667 0.00 0.00 0.00 3.01
973 974 3.307762 GCTTCCCCACAACTCAGATTAGT 60.308 47.826 0.00 0.00 0.00 2.24
981 982 5.643777 CCACAACTCAGATTAGTAAACCCAG 59.356 44.000 0.00 0.00 0.00 4.45
1006 1007 2.746277 GTGTTCCGGCGATGGCTT 60.746 61.111 9.30 0.00 39.81 4.35
1021 1022 2.384828 TGGCTTCTAAGATCGCCAGTA 58.615 47.619 5.73 0.00 46.75 2.74
1041 1042 5.690409 CAGTACCATGGTCATGTACGTATTC 59.310 44.000 23.76 0.00 37.11 1.75
1058 1059 4.680708 CGTATTCATACTGGCACTCCTTGT 60.681 45.833 0.00 0.00 0.00 3.16
1091 1092 3.321950 AGTATGGGGCTAAGCAGAGATT 58.678 45.455 0.00 0.00 0.00 2.40
1123 1124 1.902765 ATCGAGGTGCATGCTGGTGA 61.903 55.000 20.33 10.63 0.00 4.02
1160 1161 8.735315 AGATAGATGATATTTGTACTCGAGTGG 58.265 37.037 28.12 0.00 0.00 4.00
1168 1169 4.330944 TTGTACTCGAGTGGTTCACAAT 57.669 40.909 28.12 0.00 36.74 2.71
1176 1177 6.547880 ACTCGAGTGGTTCACAATATCTATCT 59.452 38.462 19.30 0.00 36.74 1.98
1275 1282 3.130633 CCAGATTGCATCGGTCGAATTA 58.869 45.455 0.00 0.00 0.00 1.40
1282 1289 3.369756 TGCATCGGTCGAATTAACAGAAC 59.630 43.478 0.00 0.00 0.00 3.01
1368 1375 1.450312 CACTGCGGACCTGAATCCC 60.450 63.158 0.00 0.00 35.03 3.85
1373 1380 2.058595 CGGACCTGAATCCCGTCCT 61.059 63.158 12.22 0.00 43.30 3.85
1386 1393 0.948623 CCGTCCTGATGAACGTGCAA 60.949 55.000 0.00 0.00 0.00 4.08
1433 1440 8.050778 TGTAACTAGCATGGACCAATAAAAAG 57.949 34.615 0.00 0.00 0.00 2.27
1434 1441 7.885922 TGTAACTAGCATGGACCAATAAAAAGA 59.114 33.333 0.00 0.00 0.00 2.52
1435 1442 7.961326 AACTAGCATGGACCAATAAAAAGAT 57.039 32.000 0.00 0.00 0.00 2.40
1436 1443 7.573968 ACTAGCATGGACCAATAAAAAGATC 57.426 36.000 0.00 0.00 0.00 2.75
1437 1444 7.118723 ACTAGCATGGACCAATAAAAAGATCA 58.881 34.615 0.00 0.00 0.00 2.92
1438 1445 6.855763 AGCATGGACCAATAAAAAGATCAA 57.144 33.333 0.00 0.00 0.00 2.57
1439 1446 6.870769 AGCATGGACCAATAAAAAGATCAAG 58.129 36.000 0.00 0.00 0.00 3.02
1440 1447 6.664816 AGCATGGACCAATAAAAAGATCAAGA 59.335 34.615 0.00 0.00 0.00 3.02
1441 1448 6.976925 GCATGGACCAATAAAAAGATCAAGAG 59.023 38.462 0.00 0.00 0.00 2.85
1640 1647 1.083015 CGAACCACAAAACGGCTCG 60.083 57.895 0.00 0.00 35.96 5.03
1668 1675 3.320826 AGCGGAAAATAAAAACCACAGCT 59.679 39.130 0.00 0.00 0.00 4.24
1686 1693 1.001181 GCTGGCAGGCAAAATGAAGAA 59.999 47.619 17.64 0.00 0.00 2.52
1744 1751 3.485463 TCCAAACCGGCTGAATATAGG 57.515 47.619 0.00 0.00 33.14 2.57
1750 1757 1.620819 CCGGCTGAATATAGGCTGAGT 59.379 52.381 0.00 0.00 40.77 3.41
1843 1850 2.362736 ACGGATCAACGTAGTAGCTCA 58.637 47.619 0.00 0.00 45.00 4.26
1983 1991 3.706594 GGTCTCTATCCCATCAAGTCACA 59.293 47.826 0.00 0.00 0.00 3.58
1997 2005 5.795972 TCAAGTCACATCCCAAATAACGTA 58.204 37.500 0.00 0.00 0.00 3.57
2005 2013 9.214957 TCACATCCCAAATAACGTATTGATATC 57.785 33.333 9.47 0.00 0.00 1.63
2053 2062 2.236146 TGTGAACAGTCCGCCATAGAAT 59.764 45.455 0.00 0.00 0.00 2.40
2238 2247 6.405538 ACTTTGACATTCCAAACATGTTTGT 58.594 32.000 36.65 25.48 46.19 2.83
2274 2287 8.072321 AGAGCTAGAGTTGATCACATCTAAAA 57.928 34.615 14.14 0.00 0.00 1.52
2310 2323 3.756117 GTGAACTCTCCATTCCTGGTTT 58.244 45.455 0.00 0.00 43.61 3.27
2341 2354 1.805254 ACGTATCCGTCCGTTGAGG 59.195 57.895 0.00 0.00 46.28 3.86
2361 2374 2.089980 GAAGCTGCACATCCATCAGTT 58.910 47.619 1.02 0.00 0.00 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.612412 TGTGCCACGAACCGGGAC 62.612 66.667 6.32 0.00 44.57 4.46
2 3 2.902846 TTTGTGCCACGAACCGGG 60.903 61.111 6.32 0.00 0.00 5.73
3 4 2.330041 GTTTGTGCCACGAACCGG 59.670 61.111 15.77 0.00 36.68 5.28
6 7 1.159098 TACCGGTTTGTGCCACGAAC 61.159 55.000 15.04 17.94 40.84 3.95
7 8 1.145598 TACCGGTTTGTGCCACGAA 59.854 52.632 15.04 0.00 0.00 3.85
9 10 0.319727 TAGTACCGGTTTGTGCCACG 60.320 55.000 15.04 0.00 0.00 4.94
10 11 1.881591 TTAGTACCGGTTTGTGCCAC 58.118 50.000 15.04 1.99 0.00 5.01
11 12 2.158784 ACTTTAGTACCGGTTTGTGCCA 60.159 45.455 15.04 0.00 0.00 4.92
12 13 2.497138 ACTTTAGTACCGGTTTGTGCC 58.503 47.619 15.04 0.00 0.00 5.01
13 14 4.377738 GCTAACTTTAGTACCGGTTTGTGC 60.378 45.833 15.04 4.77 33.32 4.57
14 15 4.152938 GGCTAACTTTAGTACCGGTTTGTG 59.847 45.833 15.04 1.08 33.32 3.33
15 16 4.318332 GGCTAACTTTAGTACCGGTTTGT 58.682 43.478 15.04 0.00 33.32 2.83
16 17 3.686241 GGGCTAACTTTAGTACCGGTTTG 59.314 47.826 15.04 0.00 33.32 2.93
17 18 3.584406 AGGGCTAACTTTAGTACCGGTTT 59.416 43.478 15.04 4.12 36.05 3.27
18 19 3.176411 AGGGCTAACTTTAGTACCGGTT 58.824 45.455 15.04 0.00 36.05 4.44
19 20 2.825223 AGGGCTAACTTTAGTACCGGT 58.175 47.619 13.98 13.98 36.05 5.28
20 21 3.900966 AAGGGCTAACTTTAGTACCGG 57.099 47.619 0.00 0.00 36.05 5.28
27 28 4.777366 ACCGGTACTAAAGGGCTAACTTTA 59.223 41.667 4.49 7.98 40.82 1.85
28 29 3.584406 ACCGGTACTAAAGGGCTAACTTT 59.416 43.478 4.49 6.77 42.83 2.66
29 30 3.176411 ACCGGTACTAAAGGGCTAACTT 58.824 45.455 4.49 0.00 0.00 2.66
30 31 2.825223 ACCGGTACTAAAGGGCTAACT 58.175 47.619 4.49 0.00 0.00 2.24
31 32 3.616956 AACCGGTACTAAAGGGCTAAC 57.383 47.619 8.00 0.00 0.00 2.34
32 33 3.327464 ACAAACCGGTACTAAAGGGCTAA 59.673 43.478 8.00 0.00 0.00 3.09
33 34 2.905736 ACAAACCGGTACTAAAGGGCTA 59.094 45.455 8.00 0.00 0.00 3.93
34 35 1.701292 ACAAACCGGTACTAAAGGGCT 59.299 47.619 8.00 0.00 0.00 5.19
35 36 1.808343 CACAAACCGGTACTAAAGGGC 59.192 52.381 8.00 0.00 0.00 5.19
36 37 3.069289 GACACAAACCGGTACTAAAGGG 58.931 50.000 8.00 0.00 0.00 3.95
37 38 3.731089 TGACACAAACCGGTACTAAAGG 58.269 45.455 8.00 0.00 0.00 3.11
38 39 5.051816 TCTTGACACAAACCGGTACTAAAG 58.948 41.667 8.00 6.24 0.00 1.85
39 40 5.021033 TCTTGACACAAACCGGTACTAAA 57.979 39.130 8.00 0.00 0.00 1.85
40 41 4.669206 TCTTGACACAAACCGGTACTAA 57.331 40.909 8.00 0.00 0.00 2.24
41 42 4.669206 TTCTTGACACAAACCGGTACTA 57.331 40.909 8.00 0.00 0.00 1.82
42 43 3.547054 TTCTTGACACAAACCGGTACT 57.453 42.857 8.00 0.00 0.00 2.73
43 44 3.120786 CGATTCTTGACACAAACCGGTAC 60.121 47.826 8.00 0.00 0.00 3.34
44 45 3.061322 CGATTCTTGACACAAACCGGTA 58.939 45.455 8.00 0.00 0.00 4.02
45 46 1.871039 CGATTCTTGACACAAACCGGT 59.129 47.619 0.00 0.00 0.00 5.28
46 47 1.196808 CCGATTCTTGACACAAACCGG 59.803 52.381 0.00 0.00 0.00 5.28
47 48 1.196808 CCCGATTCTTGACACAAACCG 59.803 52.381 0.00 0.00 0.00 4.44
48 49 2.225727 GTCCCGATTCTTGACACAAACC 59.774 50.000 0.00 0.00 0.00 3.27
49 50 3.139077 AGTCCCGATTCTTGACACAAAC 58.861 45.455 5.56 0.00 0.00 2.93
50 51 3.485463 AGTCCCGATTCTTGACACAAA 57.515 42.857 5.56 0.00 0.00 2.83
51 52 4.610605 TTAGTCCCGATTCTTGACACAA 57.389 40.909 5.56 0.00 0.00 3.33
52 53 4.562757 CCTTTAGTCCCGATTCTTGACACA 60.563 45.833 5.56 0.00 0.00 3.72
53 54 3.933332 CCTTTAGTCCCGATTCTTGACAC 59.067 47.826 5.56 0.00 0.00 3.67
54 55 3.055385 CCCTTTAGTCCCGATTCTTGACA 60.055 47.826 5.56 0.00 0.00 3.58
55 56 3.532542 CCCTTTAGTCCCGATTCTTGAC 58.467 50.000 0.00 0.00 0.00 3.18
56 57 2.504175 CCCCTTTAGTCCCGATTCTTGA 59.496 50.000 0.00 0.00 0.00 3.02
57 58 2.919228 CCCCTTTAGTCCCGATTCTTG 58.081 52.381 0.00 0.00 0.00 3.02
58 59 1.212195 GCCCCTTTAGTCCCGATTCTT 59.788 52.381 0.00 0.00 0.00 2.52
59 60 0.837940 GCCCCTTTAGTCCCGATTCT 59.162 55.000 0.00 0.00 0.00 2.40
60 61 0.837940 AGCCCCTTTAGTCCCGATTC 59.162 55.000 0.00 0.00 0.00 2.52
61 62 0.837940 GAGCCCCTTTAGTCCCGATT 59.162 55.000 0.00 0.00 0.00 3.34
62 63 1.400530 CGAGCCCCTTTAGTCCCGAT 61.401 60.000 0.00 0.00 0.00 4.18
63 64 2.056223 CGAGCCCCTTTAGTCCCGA 61.056 63.158 0.00 0.00 0.00 5.14
64 65 2.356780 ACGAGCCCCTTTAGTCCCG 61.357 63.158 0.00 0.00 0.00 5.14
65 66 1.221021 CACGAGCCCCTTTAGTCCC 59.779 63.158 0.00 0.00 0.00 4.46
66 67 1.221021 CCACGAGCCCCTTTAGTCC 59.779 63.158 0.00 0.00 0.00 3.85
67 68 1.221021 CCCACGAGCCCCTTTAGTC 59.779 63.158 0.00 0.00 0.00 2.59
68 69 2.298661 CCCCACGAGCCCCTTTAGT 61.299 63.158 0.00 0.00 0.00 2.24
69 70 2.590092 CCCCACGAGCCCCTTTAG 59.410 66.667 0.00 0.00 0.00 1.85
70 71 3.723922 GCCCCACGAGCCCCTTTA 61.724 66.667 0.00 0.00 0.00 1.85
103 104 3.218386 TAAAGGGGTGGTGGCAGGC 62.218 63.158 0.00 0.00 0.00 4.85
104 105 1.000896 CTAAAGGGGTGGTGGCAGG 60.001 63.158 0.00 0.00 0.00 4.85
105 106 0.988832 TACTAAAGGGGTGGTGGCAG 59.011 55.000 0.00 0.00 0.00 4.85
106 107 0.694196 GTACTAAAGGGGTGGTGGCA 59.306 55.000 0.00 0.00 0.00 4.92
107 108 0.034767 GGTACTAAAGGGGTGGTGGC 60.035 60.000 0.00 0.00 0.00 5.01
108 109 0.251073 CGGTACTAAAGGGGTGGTGG 59.749 60.000 0.00 0.00 0.00 4.61
109 110 0.251073 CCGGTACTAAAGGGGTGGTG 59.749 60.000 0.00 0.00 0.00 4.17
110 111 0.178894 ACCGGTACTAAAGGGGTGGT 60.179 55.000 4.49 0.00 0.00 4.16
111 112 0.986527 AACCGGTACTAAAGGGGTGG 59.013 55.000 8.00 0.00 0.00 4.61
112 113 1.404583 CGAACCGGTACTAAAGGGGTG 60.405 57.143 8.00 0.00 0.00 4.61
113 114 0.897621 CGAACCGGTACTAAAGGGGT 59.102 55.000 8.00 0.00 0.00 4.95
114 115 0.897621 ACGAACCGGTACTAAAGGGG 59.102 55.000 8.00 0.00 0.00 4.79
115 116 1.404583 CCACGAACCGGTACTAAAGGG 60.405 57.143 8.00 0.00 0.00 3.95
116 117 2.000429 CCACGAACCGGTACTAAAGG 58.000 55.000 8.00 1.40 0.00 3.11
117 118 1.337074 TGCCACGAACCGGTACTAAAG 60.337 52.381 8.00 0.00 0.00 1.85
118 119 0.678395 TGCCACGAACCGGTACTAAA 59.322 50.000 8.00 0.00 0.00 1.85
119 120 0.038343 GTGCCACGAACCGGTACTAA 60.038 55.000 8.00 0.00 36.33 2.24
120 121 1.586028 GTGCCACGAACCGGTACTA 59.414 57.895 8.00 0.00 36.33 1.82
121 122 2.341176 GTGCCACGAACCGGTACT 59.659 61.111 8.00 0.00 36.33 2.73
122 123 3.107661 CGTGCCACGAACCGGTAC 61.108 66.667 12.85 0.00 46.05 3.34
131 132 2.198906 TAGTACCGGTTCGTGCCACG 62.199 60.000 15.04 11.80 44.19 4.94
132 133 0.038343 TTAGTACCGGTTCGTGCCAC 60.038 55.000 15.04 1.99 0.00 5.01
133 134 0.678395 TTTAGTACCGGTTCGTGCCA 59.322 50.000 15.04 0.00 0.00 4.92
134 135 1.353076 CTTTAGTACCGGTTCGTGCC 58.647 55.000 15.04 0.00 0.00 5.01
135 136 1.337167 ACCTTTAGTACCGGTTCGTGC 60.337 52.381 15.04 0.00 0.00 5.34
136 137 2.730550 ACCTTTAGTACCGGTTCGTG 57.269 50.000 15.04 0.51 0.00 4.35
137 138 3.303881 GAACCTTTAGTACCGGTTCGT 57.696 47.619 15.04 0.00 44.86 3.85
140 141 4.129380 GTGTTGAACCTTTAGTACCGGTT 58.871 43.478 15.04 0.00 43.32 4.44
141 142 3.732212 GTGTTGAACCTTTAGTACCGGT 58.268 45.455 13.98 13.98 0.00 5.28
142 143 2.733026 CGTGTTGAACCTTTAGTACCGG 59.267 50.000 0.00 0.00 0.00 5.28
143 144 3.641648 TCGTGTTGAACCTTTAGTACCG 58.358 45.455 0.00 0.00 0.00 4.02
155 156 1.880271 TAATGCCGGTTCGTGTTGAA 58.120 45.000 1.90 0.00 0.00 2.69
156 157 1.532007 GTTAATGCCGGTTCGTGTTGA 59.468 47.619 1.90 0.00 0.00 3.18
157 158 1.723384 CGTTAATGCCGGTTCGTGTTG 60.723 52.381 1.90 0.00 0.00 3.33
158 159 0.513820 CGTTAATGCCGGTTCGTGTT 59.486 50.000 1.90 0.00 0.00 3.32
159 160 1.903783 GCGTTAATGCCGGTTCGTGT 61.904 55.000 8.56 0.00 0.00 4.49
160 161 1.225908 GCGTTAATGCCGGTTCGTG 60.226 57.895 8.56 0.00 0.00 4.35
161 162 1.022451 ATGCGTTAATGCCGGTTCGT 61.022 50.000 16.88 0.00 0.00 3.85
162 163 0.931702 TATGCGTTAATGCCGGTTCG 59.068 50.000 16.88 0.54 0.00 3.95
163 164 1.333791 GCTATGCGTTAATGCCGGTTC 60.334 52.381 16.88 0.00 0.00 3.62
164 165 0.661020 GCTATGCGTTAATGCCGGTT 59.339 50.000 16.88 2.50 0.00 4.44
165 166 1.164041 GGCTATGCGTTAATGCCGGT 61.164 55.000 16.88 5.96 33.96 5.28
166 167 1.574428 GGCTATGCGTTAATGCCGG 59.426 57.895 16.88 0.00 33.96 6.13
168 169 0.661020 AACGGCTATGCGTTAATGCC 59.339 50.000 16.88 1.33 40.14 4.40
169 170 1.656429 CGAACGGCTATGCGTTAATGC 60.656 52.381 12.91 12.91 0.00 3.56
170 171 1.855978 TCGAACGGCTATGCGTTAATG 59.144 47.619 0.00 0.00 0.00 1.90
171 172 2.212869 TCGAACGGCTATGCGTTAAT 57.787 45.000 0.00 0.00 0.00 1.40
172 173 1.655099 GTTCGAACGGCTATGCGTTAA 59.345 47.619 13.36 0.00 0.00 2.01
173 174 1.270971 GTTCGAACGGCTATGCGTTA 58.729 50.000 13.36 0.00 0.00 3.18
174 175 1.356527 GGTTCGAACGGCTATGCGTT 61.357 55.000 21.34 0.00 0.00 4.84
175 176 1.808390 GGTTCGAACGGCTATGCGT 60.808 57.895 21.34 0.00 0.00 5.24
176 177 2.856346 CGGTTCGAACGGCTATGCG 61.856 63.158 21.34 13.39 0.00 4.73
177 178 2.522638 CCGGTTCGAACGGCTATGC 61.523 63.158 25.58 8.97 45.34 3.14
178 179 3.700961 CCGGTTCGAACGGCTATG 58.299 61.111 25.58 11.66 45.34 2.23
184 185 1.274596 CATTAGTCCCGGTTCGAACG 58.725 55.000 21.34 15.88 0.00 3.95
185 186 1.066645 ACCATTAGTCCCGGTTCGAAC 60.067 52.381 20.14 20.14 0.00 3.95
186 187 1.269012 ACCATTAGTCCCGGTTCGAA 58.731 50.000 0.00 0.00 0.00 3.71
187 188 1.750778 GTACCATTAGTCCCGGTTCGA 59.249 52.381 0.00 0.00 34.12 3.71
188 189 1.202452 GGTACCATTAGTCCCGGTTCG 60.202 57.143 7.15 0.00 34.12 3.95
189 190 1.832998 TGGTACCATTAGTCCCGGTTC 59.167 52.381 11.60 0.00 34.12 3.62
190 191 1.955451 TGGTACCATTAGTCCCGGTT 58.045 50.000 11.60 0.00 34.12 4.44
191 192 2.185663 ATGGTACCATTAGTCCCGGT 57.814 50.000 22.23 0.00 36.79 5.28
205 206 1.876849 TTGGCCCGGTACTAATGGTA 58.123 50.000 0.00 0.00 0.00 3.25
206 207 0.993470 TTTGGCCCGGTACTAATGGT 59.007 50.000 0.00 0.00 0.00 3.55
207 208 2.131776 TTTTGGCCCGGTACTAATGG 57.868 50.000 0.00 0.00 0.00 3.16
208 209 3.697045 TCAATTTTGGCCCGGTACTAATG 59.303 43.478 0.00 0.00 0.00 1.90
209 210 3.970842 TCAATTTTGGCCCGGTACTAAT 58.029 40.909 0.00 0.00 0.00 1.73
210 211 3.436577 TCAATTTTGGCCCGGTACTAA 57.563 42.857 0.00 0.00 0.00 2.24
211 212 3.083293 GTTCAATTTTGGCCCGGTACTA 58.917 45.455 0.00 0.00 0.00 1.82
212 213 1.890489 GTTCAATTTTGGCCCGGTACT 59.110 47.619 0.00 0.00 0.00 2.73
213 214 1.067425 GGTTCAATTTTGGCCCGGTAC 60.067 52.381 0.00 0.00 0.00 3.34
214 215 1.258676 GGTTCAATTTTGGCCCGGTA 58.741 50.000 0.00 0.00 0.00 4.02
215 216 1.811645 CGGTTCAATTTTGGCCCGGT 61.812 55.000 0.00 0.00 37.82 5.28
216 217 1.080161 CGGTTCAATTTTGGCCCGG 60.080 57.895 0.00 0.00 37.82 5.73
217 218 1.080161 CCGGTTCAATTTTGGCCCG 60.080 57.895 0.00 11.93 39.70 6.13
218 219 1.188871 TCCCGGTTCAATTTTGGCCC 61.189 55.000 0.00 0.00 0.00 5.80
219 220 0.037697 GTCCCGGTTCAATTTTGGCC 60.038 55.000 0.00 0.00 0.00 5.36
220 221 0.966179 AGTCCCGGTTCAATTTTGGC 59.034 50.000 0.00 0.00 0.00 4.52
221 222 4.219725 ACATTAGTCCCGGTTCAATTTTGG 59.780 41.667 0.00 0.00 0.00 3.28
222 223 5.160641 CACATTAGTCCCGGTTCAATTTTG 58.839 41.667 0.00 0.00 0.00 2.44
223 224 4.830600 ACACATTAGTCCCGGTTCAATTTT 59.169 37.500 0.00 0.00 0.00 1.82
224 225 4.403734 ACACATTAGTCCCGGTTCAATTT 58.596 39.130 0.00 0.00 0.00 1.82
225 226 4.007659 GACACATTAGTCCCGGTTCAATT 58.992 43.478 0.00 0.00 32.36 2.32
226 227 3.263425 AGACACATTAGTCCCGGTTCAAT 59.737 43.478 0.00 0.00 39.34 2.57
227 228 2.635915 AGACACATTAGTCCCGGTTCAA 59.364 45.455 0.00 0.00 39.34 2.69
228 229 2.232941 GAGACACATTAGTCCCGGTTCA 59.767 50.000 0.00 0.00 39.34 3.18
229 230 2.232941 TGAGACACATTAGTCCCGGTTC 59.767 50.000 0.00 0.00 39.34 3.62
230 231 2.028385 GTGAGACACATTAGTCCCGGTT 60.028 50.000 0.00 0.00 39.34 4.44
231 232 1.549170 GTGAGACACATTAGTCCCGGT 59.451 52.381 0.00 0.00 39.34 5.28
232 233 1.548719 TGTGAGACACATTAGTCCCGG 59.451 52.381 0.00 0.00 39.62 5.73
243 244 5.998363 AGAAAAAGGACCTAATGTGAGACAC 59.002 40.000 0.00 0.00 34.56 3.67
244 245 6.187727 AGAAAAAGGACCTAATGTGAGACA 57.812 37.500 0.00 0.00 0.00 3.41
245 246 7.387643 AGTAGAAAAAGGACCTAATGTGAGAC 58.612 38.462 0.00 0.00 0.00 3.36
246 247 7.554959 AGTAGAAAAAGGACCTAATGTGAGA 57.445 36.000 0.00 0.00 0.00 3.27
247 248 8.532819 ACTAGTAGAAAAAGGACCTAATGTGAG 58.467 37.037 3.59 0.00 0.00 3.51
248 249 8.311836 CACTAGTAGAAAAAGGACCTAATGTGA 58.688 37.037 3.59 0.00 0.00 3.58
249 250 8.095169 ACACTAGTAGAAAAAGGACCTAATGTG 58.905 37.037 3.59 0.00 0.00 3.21
250 251 8.203681 ACACTAGTAGAAAAAGGACCTAATGT 57.796 34.615 3.59 0.00 0.00 2.71
251 252 8.532819 AGACACTAGTAGAAAAAGGACCTAATG 58.467 37.037 3.59 0.00 0.00 1.90
252 253 8.667592 AGACACTAGTAGAAAAAGGACCTAAT 57.332 34.615 3.59 0.00 0.00 1.73
253 254 7.727186 TGAGACACTAGTAGAAAAAGGACCTAA 59.273 37.037 3.59 0.00 0.00 2.69
254 255 7.236529 TGAGACACTAGTAGAAAAAGGACCTA 58.763 38.462 3.59 0.00 0.00 3.08
255 256 6.075984 TGAGACACTAGTAGAAAAAGGACCT 58.924 40.000 3.59 0.00 0.00 3.85
256 257 6.342338 TGAGACACTAGTAGAAAAAGGACC 57.658 41.667 3.59 0.00 0.00 4.46
257 258 7.208080 TGTTGAGACACTAGTAGAAAAAGGAC 58.792 38.462 3.59 0.00 0.00 3.85
258 259 7.356089 TGTTGAGACACTAGTAGAAAAAGGA 57.644 36.000 3.59 0.00 0.00 3.36
259 260 8.433421 TTTGTTGAGACACTAGTAGAAAAAGG 57.567 34.615 3.59 0.00 34.98 3.11
292 293 9.881649 CCATAGCTAGTATCATACATGTCAATT 57.118 33.333 0.00 0.00 0.00 2.32
293 294 9.040259 ACCATAGCTAGTATCATACATGTCAAT 57.960 33.333 0.00 0.00 0.00 2.57
294 295 8.422577 ACCATAGCTAGTATCATACATGTCAA 57.577 34.615 0.00 0.00 0.00 3.18
295 296 8.957466 GTACCATAGCTAGTATCATACATGTCA 58.043 37.037 0.00 0.00 0.00 3.58
296 297 9.179909 AGTACCATAGCTAGTATCATACATGTC 57.820 37.037 0.00 0.00 0.00 3.06
297 298 9.179909 GAGTACCATAGCTAGTATCATACATGT 57.820 37.037 2.69 2.69 0.00 3.21
298 299 8.625651 GGAGTACCATAGCTAGTATCATACATG 58.374 40.741 0.00 0.00 35.97 3.21
299 300 7.780745 GGGAGTACCATAGCTAGTATCATACAT 59.219 40.741 0.00 0.00 39.85 2.29
300 301 7.117397 GGGAGTACCATAGCTAGTATCATACA 58.883 42.308 0.00 0.00 39.85 2.29
301 302 7.117397 TGGGAGTACCATAGCTAGTATCATAC 58.883 42.308 0.00 0.00 46.80 2.39
302 303 7.280044 TGGGAGTACCATAGCTAGTATCATA 57.720 40.000 0.00 0.00 46.80 2.15
303 304 6.153942 TGGGAGTACCATAGCTAGTATCAT 57.846 41.667 0.00 0.00 46.80 2.45
304 305 5.594199 TGGGAGTACCATAGCTAGTATCA 57.406 43.478 0.00 0.00 46.80 2.15
317 318 9.269453 GTATCTTATTGTTACAATGGGAGTACC 57.731 37.037 19.55 0.00 40.81 3.34
318 319 9.826574 TGTATCTTATTGTTACAATGGGAGTAC 57.173 33.333 19.55 17.05 30.48 2.73
320 321 9.396022 CTTGTATCTTATTGTTACAATGGGAGT 57.604 33.333 19.55 9.91 39.01 3.85
321 322 8.345565 GCTTGTATCTTATTGTTACAATGGGAG 58.654 37.037 19.55 13.93 39.01 4.30
322 323 7.284489 GGCTTGTATCTTATTGTTACAATGGGA 59.716 37.037 19.55 16.15 39.01 4.37
323 324 7.068103 TGGCTTGTATCTTATTGTTACAATGGG 59.932 37.037 19.55 11.97 39.01 4.00
324 325 7.995289 TGGCTTGTATCTTATTGTTACAATGG 58.005 34.615 19.55 12.28 39.01 3.16
330 331 9.778741 CCTCTAATGGCTTGTATCTTATTGTTA 57.221 33.333 0.00 0.00 0.00 2.41
331 332 8.494433 TCCTCTAATGGCTTGTATCTTATTGTT 58.506 33.333 0.00 0.00 0.00 2.83
332 333 8.034313 TCCTCTAATGGCTTGTATCTTATTGT 57.966 34.615 0.00 0.00 0.00 2.71
333 334 8.908786 TTCCTCTAATGGCTTGTATCTTATTG 57.091 34.615 0.00 0.00 0.00 1.90
335 336 9.512588 CAATTCCTCTAATGGCTTGTATCTTAT 57.487 33.333 0.00 0.00 0.00 1.73
336 337 8.494433 ACAATTCCTCTAATGGCTTGTATCTTA 58.506 33.333 0.00 0.00 33.81 2.10
337 338 7.349598 ACAATTCCTCTAATGGCTTGTATCTT 58.650 34.615 0.00 0.00 33.81 2.40
338 339 6.904626 ACAATTCCTCTAATGGCTTGTATCT 58.095 36.000 0.00 0.00 33.81 1.98
339 340 8.854614 ATACAATTCCTCTAATGGCTTGTATC 57.145 34.615 11.75 0.00 39.08 2.24
340 341 8.439971 TGATACAATTCCTCTAATGGCTTGTAT 58.560 33.333 14.88 14.88 42.03 2.29
341 342 7.801104 TGATACAATTCCTCTAATGGCTTGTA 58.199 34.615 0.00 0.00 38.28 2.41
342 343 6.662755 TGATACAATTCCTCTAATGGCTTGT 58.337 36.000 0.00 0.00 36.93 3.16
343 344 6.994496 TCTGATACAATTCCTCTAATGGCTTG 59.006 38.462 0.00 0.00 0.00 4.01
344 345 7.141758 TCTGATACAATTCCTCTAATGGCTT 57.858 36.000 0.00 0.00 0.00 4.35
345 346 6.753913 TCTGATACAATTCCTCTAATGGCT 57.246 37.500 0.00 0.00 0.00 4.75
346 347 7.992754 ATTCTGATACAATTCCTCTAATGGC 57.007 36.000 0.00 0.00 0.00 4.40
391 392 6.040729 CCAAATCCCAATGCATTGTATCTACA 59.959 38.462 31.87 12.05 36.06 2.74
392 393 6.449698 CCAAATCCCAATGCATTGTATCTAC 58.550 40.000 31.87 0.00 36.06 2.59
393 394 5.539574 CCCAAATCCCAATGCATTGTATCTA 59.460 40.000 31.87 15.96 36.06 1.98
394 395 4.345837 CCCAAATCCCAATGCATTGTATCT 59.654 41.667 31.87 13.72 36.06 1.98
395 396 4.344679 TCCCAAATCCCAATGCATTGTATC 59.655 41.667 31.87 0.00 36.06 2.24
396 397 4.296912 TCCCAAATCCCAATGCATTGTAT 58.703 39.130 31.87 23.19 36.06 2.29
397 398 3.705579 CTCCCAAATCCCAATGCATTGTA 59.294 43.478 31.87 22.16 36.06 2.41
398 399 2.502538 CTCCCAAATCCCAATGCATTGT 59.497 45.455 31.87 15.61 36.06 2.71
399 400 2.743838 GCTCCCAAATCCCAATGCATTG 60.744 50.000 28.91 28.91 37.52 2.82
400 401 1.487558 GCTCCCAAATCCCAATGCATT 59.512 47.619 5.99 5.99 0.00 3.56
401 402 1.125633 GCTCCCAAATCCCAATGCAT 58.874 50.000 0.00 0.00 0.00 3.96
402 403 1.321805 CGCTCCCAAATCCCAATGCA 61.322 55.000 0.00 0.00 0.00 3.96
403 404 1.438814 CGCTCCCAAATCCCAATGC 59.561 57.895 0.00 0.00 0.00 3.56
404 405 1.438814 GCGCTCCCAAATCCCAATG 59.561 57.895 0.00 0.00 0.00 2.82
405 406 1.758122 GGCGCTCCCAAATCCCAAT 60.758 57.895 7.64 0.00 0.00 3.16
406 407 2.362375 GGCGCTCCCAAATCCCAA 60.362 61.111 7.64 0.00 0.00 4.12
421 422 7.683437 AAATAGGAATAATTAACGCTAGGGC 57.317 36.000 6.73 0.00 0.00 5.19
446 447 9.578439 GCATGAAACAAGAGAGCTTTATTAATT 57.422 29.630 0.00 0.00 30.14 1.40
447 448 8.742777 TGCATGAAACAAGAGAGCTTTATTAAT 58.257 29.630 0.00 0.00 30.14 1.40
448 449 8.109705 TGCATGAAACAAGAGAGCTTTATTAA 57.890 30.769 0.00 0.00 30.14 1.40
449 450 7.607607 TCTGCATGAAACAAGAGAGCTTTATTA 59.392 33.333 0.00 0.00 30.14 0.98
450 451 6.432162 TCTGCATGAAACAAGAGAGCTTTATT 59.568 34.615 0.00 0.00 30.14 1.40
451 452 5.942236 TCTGCATGAAACAAGAGAGCTTTAT 59.058 36.000 0.00 0.00 30.14 1.40
452 453 5.308014 TCTGCATGAAACAAGAGAGCTTTA 58.692 37.500 0.00 0.00 30.14 1.85
458 459 6.698008 TCTTTTTCTGCATGAAACAAGAGA 57.302 33.333 18.38 13.48 43.55 3.10
494 495 5.277345 GGCAAACATTGACTACGTCCATATC 60.277 44.000 0.00 0.00 35.19 1.63
525 526 5.884792 AGACCAATCTAAGATCCTTGCTTTG 59.115 40.000 0.00 0.00 31.46 2.77
544 545 1.927487 TTACGACCAGCCTTAGACCA 58.073 50.000 0.00 0.00 0.00 4.02
549 550 3.368248 ACTACCATTACGACCAGCCTTA 58.632 45.455 0.00 0.00 0.00 2.69
550 551 2.185387 ACTACCATTACGACCAGCCTT 58.815 47.619 0.00 0.00 0.00 4.35
551 552 1.861982 ACTACCATTACGACCAGCCT 58.138 50.000 0.00 0.00 0.00 4.58
552 553 3.319972 TGATACTACCATTACGACCAGCC 59.680 47.826 0.00 0.00 0.00 4.85
553 554 4.579454 TGATACTACCATTACGACCAGC 57.421 45.455 0.00 0.00 0.00 4.85
554 555 6.433404 ACCTATGATACTACCATTACGACCAG 59.567 42.308 0.00 0.00 0.00 4.00
555 556 6.309357 ACCTATGATACTACCATTACGACCA 58.691 40.000 0.00 0.00 0.00 4.02
556 557 6.830873 ACCTATGATACTACCATTACGACC 57.169 41.667 0.00 0.00 0.00 4.79
557 558 8.558973 ACTACCTATGATACTACCATTACGAC 57.441 38.462 0.00 0.00 0.00 4.34
568 569 9.137459 GGCATGTATGATACTACCTATGATACT 57.863 37.037 4.03 0.00 34.58 2.12
569 570 8.914011 TGGCATGTATGATACTACCTATGATAC 58.086 37.037 4.03 0.00 34.26 2.24
570 571 9.487442 TTGGCATGTATGATACTACCTATGATA 57.513 33.333 4.03 0.00 0.00 2.15
571 572 7.978099 TGGCATGTATGATACTACCTATGAT 57.022 36.000 4.03 0.00 0.00 2.45
572 573 7.454694 AGTTGGCATGTATGATACTACCTATGA 59.545 37.037 4.03 0.00 0.00 2.15
573 574 7.615403 AGTTGGCATGTATGATACTACCTATG 58.385 38.462 4.03 0.43 0.00 2.23
574 575 7.798710 AGTTGGCATGTATGATACTACCTAT 57.201 36.000 4.03 0.00 0.00 2.57
575 576 8.715190 TTAGTTGGCATGTATGATACTACCTA 57.285 34.615 4.03 0.00 0.00 3.08
576 577 7.612065 TTAGTTGGCATGTATGATACTACCT 57.388 36.000 4.03 0.00 0.00 3.08
577 578 6.369065 GCTTAGTTGGCATGTATGATACTACC 59.631 42.308 4.03 3.59 0.00 3.18
578 579 6.929049 TGCTTAGTTGGCATGTATGATACTAC 59.071 38.462 4.03 0.00 34.56 2.73
579 580 7.061566 TGCTTAGTTGGCATGTATGATACTA 57.938 36.000 4.03 0.00 34.56 1.82
580 581 5.928976 TGCTTAGTTGGCATGTATGATACT 58.071 37.500 4.03 0.00 34.56 2.12
581 582 6.618287 TTGCTTAGTTGGCATGTATGATAC 57.382 37.500 0.00 0.00 39.54 2.24
582 583 7.822161 AATTGCTTAGTTGGCATGTATGATA 57.178 32.000 0.00 0.00 39.54 2.15
583 584 6.720112 AATTGCTTAGTTGGCATGTATGAT 57.280 33.333 0.00 0.00 39.54 2.45
584 585 6.528537 AAATTGCTTAGTTGGCATGTATGA 57.471 33.333 0.00 0.00 39.54 2.15
585 586 6.812656 TCAAAATTGCTTAGTTGGCATGTATG 59.187 34.615 0.00 0.00 39.54 2.39
586 587 6.934056 TCAAAATTGCTTAGTTGGCATGTAT 58.066 32.000 0.00 0.00 39.54 2.29
587 588 6.338214 TCAAAATTGCTTAGTTGGCATGTA 57.662 33.333 0.00 0.00 39.54 2.29
588 589 5.212532 TCAAAATTGCTTAGTTGGCATGT 57.787 34.783 0.00 0.00 39.54 3.21
589 590 5.870433 TCATCAAAATTGCTTAGTTGGCATG 59.130 36.000 0.00 0.00 39.54 4.06
590 591 6.040209 TCATCAAAATTGCTTAGTTGGCAT 57.960 33.333 0.00 0.00 39.54 4.40
591 592 5.465532 TCATCAAAATTGCTTAGTTGGCA 57.534 34.783 0.00 0.00 37.97 4.92
592 593 4.866486 CCTCATCAAAATTGCTTAGTTGGC 59.134 41.667 0.00 0.00 0.00 4.52
593 594 5.865552 CACCTCATCAAAATTGCTTAGTTGG 59.134 40.000 0.00 0.00 0.00 3.77
594 595 5.865552 CCACCTCATCAAAATTGCTTAGTTG 59.134 40.000 0.00 0.00 0.00 3.16
595 596 5.567423 GCCACCTCATCAAAATTGCTTAGTT 60.567 40.000 0.00 0.00 0.00 2.24
596 597 4.082026 GCCACCTCATCAAAATTGCTTAGT 60.082 41.667 0.00 0.00 0.00 2.24
597 598 4.082081 TGCCACCTCATCAAAATTGCTTAG 60.082 41.667 0.00 0.00 0.00 2.18
598 599 3.831333 TGCCACCTCATCAAAATTGCTTA 59.169 39.130 0.00 0.00 0.00 3.09
599 600 2.633967 TGCCACCTCATCAAAATTGCTT 59.366 40.909 0.00 0.00 0.00 3.91
600 601 2.250031 TGCCACCTCATCAAAATTGCT 58.750 42.857 0.00 0.00 0.00 3.91
601 602 2.747396 TGCCACCTCATCAAAATTGC 57.253 45.000 0.00 0.00 0.00 3.56
602 603 7.852971 ATTTTATGCCACCTCATCAAAATTG 57.147 32.000 0.00 0.00 0.00 2.32
603 604 9.956640 TTAATTTTATGCCACCTCATCAAAATT 57.043 25.926 0.00 0.00 35.99 1.82
604 605 9.956640 TTTAATTTTATGCCACCTCATCAAAAT 57.043 25.926 0.00 0.00 30.40 1.82
605 606 9.956640 ATTTAATTTTATGCCACCTCATCAAAA 57.043 25.926 0.00 0.00 0.00 2.44
606 607 9.381033 CATTTAATTTTATGCCACCTCATCAAA 57.619 29.630 0.00 0.00 0.00 2.69
607 608 8.756927 TCATTTAATTTTATGCCACCTCATCAA 58.243 29.630 0.00 0.00 0.00 2.57
608 609 8.303780 TCATTTAATTTTATGCCACCTCATCA 57.696 30.769 0.00 0.00 0.00 3.07
609 610 9.252962 CTTCATTTAATTTTATGCCACCTCATC 57.747 33.333 0.00 0.00 0.00 2.92
610 611 8.980596 TCTTCATTTAATTTTATGCCACCTCAT 58.019 29.630 0.00 0.00 0.00 2.90
611 612 8.359875 TCTTCATTTAATTTTATGCCACCTCA 57.640 30.769 0.00 0.00 0.00 3.86
612 613 9.651913 TTTCTTCATTTAATTTTATGCCACCTC 57.348 29.630 0.00 0.00 0.00 3.85
613 614 9.657419 CTTTCTTCATTTAATTTTATGCCACCT 57.343 29.630 0.00 0.00 0.00 4.00
614 615 9.651913 TCTTTCTTCATTTAATTTTATGCCACC 57.348 29.630 0.00 0.00 0.00 4.61
622 623 9.920133 GAAGCCTCTCTTTCTTCATTTAATTTT 57.080 29.630 0.00 0.00 36.96 1.82
623 624 8.239998 CGAAGCCTCTCTTTCTTCATTTAATTT 58.760 33.333 0.00 0.00 36.83 1.82
624 625 7.148171 CCGAAGCCTCTCTTTCTTCATTTAATT 60.148 37.037 0.00 0.00 36.83 1.40
625 626 6.317391 CCGAAGCCTCTCTTTCTTCATTTAAT 59.683 38.462 0.00 0.00 36.83 1.40
626 627 5.643777 CCGAAGCCTCTCTTTCTTCATTTAA 59.356 40.000 0.00 0.00 36.83 1.52
627 628 5.178797 CCGAAGCCTCTCTTTCTTCATTTA 58.821 41.667 0.00 0.00 36.83 1.40
628 629 4.006319 CCGAAGCCTCTCTTTCTTCATTT 58.994 43.478 0.00 0.00 36.83 2.32
629 630 3.008485 ACCGAAGCCTCTCTTTCTTCATT 59.992 43.478 0.00 0.00 36.83 2.57
630 631 2.569404 ACCGAAGCCTCTCTTTCTTCAT 59.431 45.455 0.00 0.00 36.83 2.57
631 632 1.971357 ACCGAAGCCTCTCTTTCTTCA 59.029 47.619 0.00 0.00 36.83 3.02
632 633 2.753055 ACCGAAGCCTCTCTTTCTTC 57.247 50.000 0.00 0.00 34.56 2.87
633 634 3.769844 TGATACCGAAGCCTCTCTTTCTT 59.230 43.478 0.00 0.00 34.56 2.52
634 635 3.366396 TGATACCGAAGCCTCTCTTTCT 58.634 45.455 0.00 0.00 34.56 2.52
635 636 3.802948 TGATACCGAAGCCTCTCTTTC 57.197 47.619 0.00 0.00 34.56 2.62
636 637 6.426646 AATATGATACCGAAGCCTCTCTTT 57.573 37.500 0.00 0.00 34.56 2.52
637 638 6.426646 AAATATGATACCGAAGCCTCTCTT 57.573 37.500 0.00 0.00 37.83 2.85
638 639 6.042093 TCAAAATATGATACCGAAGCCTCTCT 59.958 38.462 0.00 0.00 31.50 3.10
639 640 6.223852 TCAAAATATGATACCGAAGCCTCTC 58.776 40.000 0.00 0.00 31.50 3.20
640 641 6.174720 TCAAAATATGATACCGAAGCCTCT 57.825 37.500 0.00 0.00 31.50 3.69
676 677 9.838975 CATGACACAAAGTAGCACATTATTTAA 57.161 29.630 0.00 0.00 0.00 1.52
677 678 7.967854 GCATGACACAAAGTAGCACATTATTTA 59.032 33.333 0.00 0.00 0.00 1.40
678 679 6.808212 GCATGACACAAAGTAGCACATTATTT 59.192 34.615 0.00 0.00 0.00 1.40
679 680 6.072008 TGCATGACACAAAGTAGCACATTATT 60.072 34.615 0.00 0.00 30.65 1.40
680 681 5.415389 TGCATGACACAAAGTAGCACATTAT 59.585 36.000 0.00 0.00 30.65 1.28
681 682 4.759183 TGCATGACACAAAGTAGCACATTA 59.241 37.500 0.00 0.00 30.65 1.90
682 683 3.569277 TGCATGACACAAAGTAGCACATT 59.431 39.130 0.00 0.00 30.65 2.71
683 684 3.148412 TGCATGACACAAAGTAGCACAT 58.852 40.909 0.00 0.00 30.65 3.21
684 685 2.570135 TGCATGACACAAAGTAGCACA 58.430 42.857 0.00 0.00 30.65 4.57
685 686 3.725895 CGATGCATGACACAAAGTAGCAC 60.726 47.826 2.46 0.00 36.06 4.40
686 687 2.416202 CGATGCATGACACAAAGTAGCA 59.584 45.455 2.46 0.00 37.13 3.49
687 688 2.789092 GCGATGCATGACACAAAGTAGC 60.789 50.000 2.46 0.00 0.00 3.58
688 689 2.674852 AGCGATGCATGACACAAAGTAG 59.325 45.455 2.46 0.00 0.00 2.57
689 690 2.698803 AGCGATGCATGACACAAAGTA 58.301 42.857 2.46 0.00 0.00 2.24
690 691 1.527034 AGCGATGCATGACACAAAGT 58.473 45.000 2.46 0.00 0.00 2.66
691 692 3.957671 ATAGCGATGCATGACACAAAG 57.042 42.857 2.46 0.00 0.00 2.77
692 693 5.809719 TTTATAGCGATGCATGACACAAA 57.190 34.783 2.46 0.00 0.00 2.83
693 694 5.296531 ACATTTATAGCGATGCATGACACAA 59.703 36.000 2.46 0.00 0.00 3.33
694 695 4.815846 ACATTTATAGCGATGCATGACACA 59.184 37.500 2.46 0.00 0.00 3.72
695 696 5.348418 ACATTTATAGCGATGCATGACAC 57.652 39.130 2.46 0.00 0.00 3.67
696 697 7.148423 GGATTACATTTATAGCGATGCATGACA 60.148 37.037 2.46 0.00 0.00 3.58
697 698 7.065085 AGGATTACATTTATAGCGATGCATGAC 59.935 37.037 2.46 0.00 0.00 3.06
698 699 7.105588 AGGATTACATTTATAGCGATGCATGA 58.894 34.615 2.46 0.00 0.00 3.07
699 700 7.312657 AGGATTACATTTATAGCGATGCATG 57.687 36.000 2.46 0.00 0.00 4.06
700 701 7.928307 AAGGATTACATTTATAGCGATGCAT 57.072 32.000 0.00 0.00 0.00 3.96
701 702 7.744087 AAAGGATTACATTTATAGCGATGCA 57.256 32.000 0.00 0.00 0.00 3.96
702 703 9.708222 CATAAAGGATTACATTTATAGCGATGC 57.292 33.333 0.00 0.00 39.75 3.91
712 713 9.365906 TGCATGGTATCATAAAGGATTACATTT 57.634 29.630 0.00 0.00 34.43 2.32
713 714 8.938801 TGCATGGTATCATAAAGGATTACATT 57.061 30.769 0.00 0.00 31.33 2.71
714 715 9.537852 AATGCATGGTATCATAAAGGATTACAT 57.462 29.630 0.00 0.00 31.33 2.29
715 716 8.938801 AATGCATGGTATCATAAAGGATTACA 57.061 30.769 0.00 0.00 31.33 2.41
717 718 9.161629 CGTAATGCATGGTATCATAAAGGATTA 57.838 33.333 0.00 0.00 31.33 1.75
718 719 7.121168 CCGTAATGCATGGTATCATAAAGGATT 59.879 37.037 0.00 0.00 31.33 3.01
719 720 6.599244 CCGTAATGCATGGTATCATAAAGGAT 59.401 38.462 0.00 0.00 31.33 3.24
720 721 5.937540 CCGTAATGCATGGTATCATAAAGGA 59.062 40.000 0.00 0.00 31.33 3.36
721 722 5.937540 TCCGTAATGCATGGTATCATAAAGG 59.062 40.000 0.00 0.00 34.56 3.11
722 723 7.615582 ATCCGTAATGCATGGTATCATAAAG 57.384 36.000 0.00 0.00 34.56 1.85
723 724 7.994425 AATCCGTAATGCATGGTATCATAAA 57.006 32.000 0.00 0.00 34.56 1.40
724 725 7.994425 AAATCCGTAATGCATGGTATCATAA 57.006 32.000 0.00 0.00 34.56 1.90
725 726 8.318412 ACTAAATCCGTAATGCATGGTATCATA 58.682 33.333 0.00 0.00 34.56 2.15
726 727 7.168219 ACTAAATCCGTAATGCATGGTATCAT 58.832 34.615 0.00 0.00 34.56 2.45
727 728 6.530120 ACTAAATCCGTAATGCATGGTATCA 58.470 36.000 0.00 0.00 34.56 2.15
728 729 8.718102 ATACTAAATCCGTAATGCATGGTATC 57.282 34.615 0.00 0.00 34.56 2.24
729 730 8.318412 TGATACTAAATCCGTAATGCATGGTAT 58.682 33.333 0.00 0.00 34.56 2.73
730 731 7.672240 TGATACTAAATCCGTAATGCATGGTA 58.328 34.615 0.00 0.00 34.56 3.25
731 732 6.530120 TGATACTAAATCCGTAATGCATGGT 58.470 36.000 0.00 0.00 34.56 3.55
732 733 7.615582 ATGATACTAAATCCGTAATGCATGG 57.384 36.000 0.00 0.00 34.18 3.66
733 734 9.150348 TGTATGATACTAAATCCGTAATGCATG 57.850 33.333 0.00 0.00 0.00 4.06
734 735 9.151471 GTGTATGATACTAAATCCGTAATGCAT 57.849 33.333 4.03 0.00 0.00 3.96
735 736 8.364894 AGTGTATGATACTAAATCCGTAATGCA 58.635 33.333 4.03 0.00 0.00 3.96
736 737 8.648097 CAGTGTATGATACTAAATCCGTAATGC 58.352 37.037 4.03 0.00 0.00 3.56
737 738 9.140286 CCAGTGTATGATACTAAATCCGTAATG 57.860 37.037 4.03 0.00 0.00 1.90
738 739 8.867097 ACCAGTGTATGATACTAAATCCGTAAT 58.133 33.333 4.03 0.00 0.00 1.89
739 740 8.241497 ACCAGTGTATGATACTAAATCCGTAA 57.759 34.615 4.03 0.00 0.00 3.18
740 741 7.828508 ACCAGTGTATGATACTAAATCCGTA 57.171 36.000 4.03 0.00 0.00 4.02
741 742 6.726490 ACCAGTGTATGATACTAAATCCGT 57.274 37.500 4.03 0.00 0.00 4.69
742 743 8.520351 TGATACCAGTGTATGATACTAAATCCG 58.480 37.037 4.03 0.00 37.80 4.18
749 750 9.720874 ATCCATATGATACCAGTGTATGATACT 57.279 33.333 3.65 0.00 36.68 2.12
750 751 9.755804 CATCCATATGATACCAGTGTATGATAC 57.244 37.037 3.65 0.00 36.68 2.24
751 752 9.713684 TCATCCATATGATACCAGTGTATGATA 57.286 33.333 3.65 0.00 37.74 2.15
752 753 8.613922 TCATCCATATGATACCAGTGTATGAT 57.386 34.615 3.65 0.00 37.80 2.45
772 773 9.523168 GGGGAGTATCATATACTAGTATCATCC 57.477 40.741 18.68 14.52 36.25 3.51
782 783 9.166222 TGTTTGTAATGGGGAGTATCATATACT 57.834 33.333 0.00 0.00 36.25 2.12
783 784 9.787435 TTGTTTGTAATGGGGAGTATCATATAC 57.213 33.333 0.00 0.00 36.25 1.47
785 786 9.881773 ATTTGTTTGTAATGGGGAGTATCATAT 57.118 29.630 0.00 0.00 36.25 1.78
786 787 9.707957 AATTTGTTTGTAATGGGGAGTATCATA 57.292 29.630 0.00 0.00 36.25 2.15
787 788 8.608185 AATTTGTTTGTAATGGGGAGTATCAT 57.392 30.769 0.00 0.00 36.25 2.45
788 789 9.535170 TTAATTTGTTTGTAATGGGGAGTATCA 57.465 29.630 0.00 0.00 36.25 2.15
821 822 7.937700 TTTAATTGGATACTCTCCCATCTCT 57.062 36.000 0.00 0.00 44.23 3.10
921 922 8.999431 GCAAGGCTATTGCTTTACTTGTATATA 58.001 33.333 16.67 0.00 41.87 0.86
924 925 5.652014 TGCAAGGCTATTGCTTTACTTGTAT 59.348 36.000 21.96 0.00 45.13 2.29
951 952 2.206576 AATCTGAGTTGTGGGGAAGC 57.793 50.000 0.00 0.00 0.00 3.86
973 974 3.547746 GAACACTTGGTGTCTGGGTTTA 58.452 45.455 3.74 0.00 46.79 2.01
981 982 2.604174 CGCCGGAACACTTGGTGTC 61.604 63.158 5.05 0.00 46.79 3.67
1006 1007 2.628178 CCATGGTACTGGCGATCTTAGA 59.372 50.000 2.57 0.00 0.00 2.10
1021 1022 4.746535 TGAATACGTACATGACCATGGT 57.253 40.909 19.89 19.89 42.91 3.55
1058 1059 4.303794 AGCCCCATACTAACCTGAATACA 58.696 43.478 0.00 0.00 0.00 2.29
1091 1092 1.512996 CCTCGATAAGGCTCGGCGTA 61.513 60.000 6.85 0.00 38.67 4.42
1113 1114 0.520404 GAAGCACTGTCACCAGCATG 59.480 55.000 0.00 0.00 42.81 4.06
1123 1124 9.053840 CAAATATCATCTATCTTGAAGCACTGT 57.946 33.333 0.00 0.00 0.00 3.55
1153 1154 6.961360 AGATAGATATTGTGAACCACTCGA 57.039 37.500 0.00 0.00 35.11 4.04
1248 1255 1.492176 ACCGATGCAATCTGGATCCTT 59.508 47.619 14.23 0.00 41.43 3.36
1275 1282 5.105554 TGCAACATTTAACACAGGTTCTGTT 60.106 36.000 0.00 0.00 42.59 3.16
1282 1289 3.432933 GGCATTGCAACATTTAACACAGG 59.567 43.478 11.39 0.00 0.00 4.00
1368 1375 0.865111 TTTGCACGTTCATCAGGACG 59.135 50.000 0.00 0.00 0.00 4.79
1407 1414 8.410673 TTTTTATTGGTCCATGCTAGTTACAA 57.589 30.769 0.00 0.00 0.00 2.41
1433 1440 9.593134 AGTTGTAATGTACTTGATCTCTTGATC 57.407 33.333 0.00 0.00 46.89 2.92
1434 1441 9.950496 AAGTTGTAATGTACTTGATCTCTTGAT 57.050 29.630 0.00 0.00 33.55 2.57
1435 1442 9.778741 AAAGTTGTAATGTACTTGATCTCTTGA 57.221 29.630 0.00 0.00 34.95 3.02
1640 1647 3.606777 GGTTTTTATTTTCCGCTCTTCGC 59.393 43.478 0.00 0.00 36.73 4.70
1668 1675 2.037511 CCTTTCTTCATTTTGCCTGCCA 59.962 45.455 0.00 0.00 0.00 4.92
1744 1751 2.546795 CGATGGGAGATGGTAACTCAGC 60.547 54.545 0.00 0.00 36.26 4.26
1750 1757 2.605257 CTACCCGATGGGAGATGGTAA 58.395 52.381 9.30 0.00 46.90 2.85
1879 1887 5.694006 TGCAGGAATGATTTGGTTTTTAACG 59.306 36.000 0.00 0.00 0.00 3.18
1979 1987 9.214957 GATATCAATACGTTATTTGGGATGTGA 57.785 33.333 0.00 0.00 0.00 3.58
2053 2062 0.617935 TGATTGTCCCATGGCGAAGA 59.382 50.000 6.09 0.00 0.00 2.87
2128 2137 1.444119 GACAAAGCGCAACTGGACCA 61.444 55.000 11.47 0.00 0.00 4.02
2238 2247 9.509956 GATCAACTCTAGCTCTATTCCTAGTTA 57.490 37.037 0.00 0.00 34.18 2.24
2274 2287 7.147724 TGGAGAGTTCACGGATAAATCTATGTT 60.148 37.037 0.00 0.00 31.89 2.71
2286 2299 1.550524 CAGGAATGGAGAGTTCACGGA 59.449 52.381 0.00 0.00 0.00 4.69
2341 2354 1.747709 ACTGATGGATGTGCAGCTTC 58.252 50.000 0.00 0.00 33.03 3.86
2361 2374 0.770499 TGGCTCCATTTGGTGAGACA 59.230 50.000 2.92 0.00 36.34 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.