Multiple sequence alignment - TraesCS3B01G577100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G577100 chr3B 100.000 2432 0 0 1 2432 807219636 807222067 0.000000e+00 4492.0
1 TraesCS3B01G577100 chr3B 91.383 824 50 9 685 1502 807230857 807231665 0.000000e+00 1109.0
2 TraesCS3B01G577100 chr3D 90.362 1878 117 25 534 2357 599340272 599342139 0.000000e+00 2407.0
3 TraesCS3B01G577100 chr3D 84.170 259 37 4 188 443 233179543 233179286 5.190000e-62 248.0
4 TraesCS3B01G577100 chr3D 91.398 93 5 3 2341 2432 599342443 599342533 9.130000e-25 124.0
5 TraesCS3B01G577100 chr3A 91.688 1588 77 19 676 2240 729590402 729591957 0.000000e+00 2150.0
6 TraesCS3B01G577100 chr3A 86.735 1078 86 17 685 1733 729607268 729608317 0.000000e+00 1146.0
7 TraesCS3B01G577100 chr3A 89.510 734 51 11 1717 2428 729608330 729609059 0.000000e+00 905.0
8 TraesCS3B01G577100 chr3A 88.591 447 31 10 3 439 118505626 118505190 2.140000e-145 525.0
9 TraesCS3B01G577100 chr3A 94.697 132 7 0 2301 2432 729597381 729597512 3.170000e-49 206.0
10 TraesCS3B01G577100 chr3A 93.277 119 8 0 557 675 729586521 729586639 2.490000e-40 176.0
11 TraesCS3B01G577100 chr4D 87.688 333 36 3 112 441 490245107 490244777 1.360000e-102 383.0
12 TraesCS3B01G577100 chr7B 82.651 415 48 13 49 439 101655060 101654646 1.790000e-91 346.0
13 TraesCS3B01G577100 chr6A 89.781 274 23 3 179 447 24778337 24778064 1.790000e-91 346.0
14 TraesCS3B01G577100 chr5A 89.474 266 24 3 179 440 54735858 54736123 1.390000e-87 333.0
15 TraesCS3B01G577100 chr5A 94.286 35 0 1 2391 2425 537642923 537642891 4.000000e-03 52.8
16 TraesCS3B01G577100 chr2D 94.089 203 11 1 239 440 631487562 631487764 8.450000e-80 307.0
17 TraesCS3B01G577100 chr2D 91.429 105 1 2 1 101 631487450 631487550 1.170000e-28 137.0
18 TraesCS3B01G577100 chr5B 87.259 259 30 3 181 438 134907505 134907249 2.370000e-75 292.0
19 TraesCS3B01G577100 chr2A 85.441 261 33 4 181 440 442557003 442557259 1.430000e-67 267.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G577100 chr3B 807219636 807222067 2431 False 4492.0 4492 100.0000 1 2432 1 chr3B.!!$F1 2431
1 TraesCS3B01G577100 chr3B 807230857 807231665 808 False 1109.0 1109 91.3830 685 1502 1 chr3B.!!$F2 817
2 TraesCS3B01G577100 chr3D 599340272 599342533 2261 False 1265.5 2407 90.8800 534 2432 2 chr3D.!!$F1 1898
3 TraesCS3B01G577100 chr3A 729586521 729591957 5436 False 1163.0 2150 92.4825 557 2240 2 chr3A.!!$F2 1683
4 TraesCS3B01G577100 chr3A 729607268 729609059 1791 False 1025.5 1146 88.1225 685 2428 2 chr3A.!!$F3 1743

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
126 127 0.108992 GTACATCCGTCCAGCGACAA 60.109 55.0 0.00 0.00 44.77 3.18 F
273 274 0.552848 ACCTTGTATGGCATCAGGGG 59.447 55.0 22.42 17.78 35.54 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1394 5190 0.322187 TGATGAGGACGAGGACACGA 60.322 55.0 0.0 0.0 37.03 4.35 R
2249 6112 0.316841 TTTGATTTCTGCCCGCAACC 59.683 50.0 0.0 0.0 0.00 3.77 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.064079 CGCACGGAAAGATGGATGA 57.936 52.632 0.00 0.00 0.00 2.92
19 20 1.586422 CGCACGGAAAGATGGATGAT 58.414 50.000 0.00 0.00 0.00 2.45
20 21 1.942657 CGCACGGAAAGATGGATGATT 59.057 47.619 0.00 0.00 0.00 2.57
21 22 3.130633 CGCACGGAAAGATGGATGATTA 58.869 45.455 0.00 0.00 0.00 1.75
22 23 3.185188 CGCACGGAAAGATGGATGATTAG 59.815 47.826 0.00 0.00 0.00 1.73
23 24 4.380531 GCACGGAAAGATGGATGATTAGA 58.619 43.478 0.00 0.00 0.00 2.10
24 25 4.816385 GCACGGAAAGATGGATGATTAGAA 59.184 41.667 0.00 0.00 0.00 2.10
25 26 5.049818 GCACGGAAAGATGGATGATTAGAAG 60.050 44.000 0.00 0.00 0.00 2.85
26 27 5.049818 CACGGAAAGATGGATGATTAGAAGC 60.050 44.000 0.00 0.00 0.00 3.86
27 28 4.151335 CGGAAAGATGGATGATTAGAAGCG 59.849 45.833 0.00 0.00 0.00 4.68
28 29 4.453819 GGAAAGATGGATGATTAGAAGCGG 59.546 45.833 0.00 0.00 0.00 5.52
29 30 3.692257 AGATGGATGATTAGAAGCGGG 57.308 47.619 0.00 0.00 0.00 6.13
30 31 2.079925 GATGGATGATTAGAAGCGGGC 58.920 52.381 0.00 0.00 0.00 6.13
31 32 1.131638 TGGATGATTAGAAGCGGGCT 58.868 50.000 0.00 0.00 0.00 5.19
32 33 2.325484 TGGATGATTAGAAGCGGGCTA 58.675 47.619 0.00 0.00 0.00 3.93
33 34 2.906389 TGGATGATTAGAAGCGGGCTAT 59.094 45.455 0.00 0.00 0.00 2.97
34 35 3.327757 TGGATGATTAGAAGCGGGCTATT 59.672 43.478 0.00 0.00 0.00 1.73
35 36 3.935828 GGATGATTAGAAGCGGGCTATTC 59.064 47.826 0.00 0.00 0.00 1.75
36 37 3.026630 TGATTAGAAGCGGGCTATTCG 57.973 47.619 0.00 0.00 0.00 3.34
37 38 2.626266 TGATTAGAAGCGGGCTATTCGA 59.374 45.455 0.00 0.00 0.00 3.71
38 39 3.258372 TGATTAGAAGCGGGCTATTCGAT 59.742 43.478 0.00 0.00 0.00 3.59
39 40 2.724977 TAGAAGCGGGCTATTCGATG 57.275 50.000 0.00 0.00 0.00 3.84
40 41 1.040646 AGAAGCGGGCTATTCGATGA 58.959 50.000 0.00 0.00 0.00 2.92
41 42 1.412710 AGAAGCGGGCTATTCGATGAA 59.587 47.619 0.00 0.00 0.00 2.57
42 43 2.037772 AGAAGCGGGCTATTCGATGAAT 59.962 45.455 0.00 0.00 36.20 2.57
43 44 2.086054 AGCGGGCTATTCGATGAATC 57.914 50.000 0.00 0.00 33.95 2.52
58 59 5.366829 GATGAATCGATCCATGCATGAAA 57.633 39.130 28.31 15.60 0.00 2.69
59 60 5.950883 GATGAATCGATCCATGCATGAAAT 58.049 37.500 28.31 19.53 0.00 2.17
60 61 7.080353 GATGAATCGATCCATGCATGAAATA 57.920 36.000 28.31 10.52 0.00 1.40
61 62 7.640597 ATGAATCGATCCATGCATGAAATAT 57.359 32.000 28.31 14.68 0.00 1.28
62 63 8.741603 ATGAATCGATCCATGCATGAAATATA 57.258 30.769 28.31 11.89 0.00 0.86
63 64 7.977904 TGAATCGATCCATGCATGAAATATAC 58.022 34.615 28.31 12.47 0.00 1.47
64 65 7.825761 TGAATCGATCCATGCATGAAATATACT 59.174 33.333 28.31 5.85 0.00 2.12
65 66 9.317936 GAATCGATCCATGCATGAAATATACTA 57.682 33.333 28.31 4.58 0.00 1.82
66 67 8.883954 ATCGATCCATGCATGAAATATACTAG 57.116 34.615 28.31 7.07 0.00 2.57
67 68 7.840931 TCGATCCATGCATGAAATATACTAGT 58.159 34.615 28.31 0.00 0.00 2.57
68 69 7.761249 TCGATCCATGCATGAAATATACTAGTG 59.239 37.037 28.31 6.34 0.00 2.74
69 70 7.761249 CGATCCATGCATGAAATATACTAGTGA 59.239 37.037 28.31 11.62 0.00 3.41
70 71 9.440773 GATCCATGCATGAAATATACTAGTGAA 57.559 33.333 28.31 0.00 0.00 3.18
71 72 9.970553 ATCCATGCATGAAATATACTAGTGAAT 57.029 29.630 28.31 0.00 0.00 2.57
85 86 8.713737 ATACTAGTGAATATACATGCATGCAG 57.286 34.615 26.69 19.15 0.00 4.41
86 87 5.936372 ACTAGTGAATATACATGCATGCAGG 59.064 40.000 29.33 29.33 0.00 4.85
87 88 4.976864 AGTGAATATACATGCATGCAGGA 58.023 39.130 36.44 20.27 0.00 3.86
88 89 5.379187 AGTGAATATACATGCATGCAGGAA 58.621 37.500 36.44 21.43 0.00 3.36
89 90 5.829391 AGTGAATATACATGCATGCAGGAAA 59.171 36.000 36.44 23.81 0.00 3.13
90 91 6.321945 AGTGAATATACATGCATGCAGGAAAA 59.678 34.615 36.44 21.43 0.00 2.29
91 92 6.979817 GTGAATATACATGCATGCAGGAAAAA 59.020 34.615 36.44 19.09 0.00 1.94
92 93 6.979817 TGAATATACATGCATGCAGGAAAAAC 59.020 34.615 36.44 21.37 0.00 2.43
93 94 6.720112 ATATACATGCATGCAGGAAAAACT 57.280 33.333 36.44 16.86 0.00 2.66
94 95 3.756933 ACATGCATGCAGGAAAAACTT 57.243 38.095 36.44 11.43 0.00 2.66
95 96 4.075963 ACATGCATGCAGGAAAAACTTT 57.924 36.364 36.44 10.65 0.00 2.66
96 97 4.060205 ACATGCATGCAGGAAAAACTTTC 58.940 39.130 36.44 0.00 0.00 2.62
97 98 3.815856 TGCATGCAGGAAAAACTTTCA 57.184 38.095 18.46 0.00 0.00 2.69
98 99 3.719924 TGCATGCAGGAAAAACTTTCAG 58.280 40.909 18.46 0.00 0.00 3.02
99 100 2.477754 GCATGCAGGAAAAACTTTCAGC 59.522 45.455 14.21 5.47 0.00 4.26
100 101 3.719924 CATGCAGGAAAAACTTTCAGCA 58.280 40.909 15.89 15.89 36.16 4.41
101 102 3.163630 TGCAGGAAAAACTTTCAGCAC 57.836 42.857 11.87 0.00 0.00 4.40
102 103 2.495270 TGCAGGAAAAACTTTCAGCACA 59.505 40.909 11.87 0.00 0.00 4.57
103 104 3.118542 GCAGGAAAAACTTTCAGCACAG 58.881 45.455 9.52 0.00 0.00 3.66
104 105 3.118542 CAGGAAAAACTTTCAGCACAGC 58.881 45.455 1.88 0.00 0.00 4.40
105 106 2.760092 AGGAAAAACTTTCAGCACAGCA 59.240 40.909 1.88 0.00 0.00 4.41
106 107 2.860136 GGAAAAACTTTCAGCACAGCAC 59.140 45.455 1.88 0.00 0.00 4.40
107 108 2.193306 AAAACTTTCAGCACAGCACG 57.807 45.000 0.00 0.00 0.00 5.34
108 109 1.094785 AAACTTTCAGCACAGCACGT 58.905 45.000 0.00 0.00 0.00 4.49
109 110 1.948104 AACTTTCAGCACAGCACGTA 58.052 45.000 0.00 0.00 0.00 3.57
110 111 1.217882 ACTTTCAGCACAGCACGTAC 58.782 50.000 0.00 0.00 0.00 3.67
111 112 1.217001 CTTTCAGCACAGCACGTACA 58.783 50.000 0.00 0.00 0.00 2.90
112 113 1.800586 CTTTCAGCACAGCACGTACAT 59.199 47.619 0.00 0.00 0.00 2.29
113 114 1.428448 TTCAGCACAGCACGTACATC 58.572 50.000 0.00 0.00 0.00 3.06
114 115 0.389817 TCAGCACAGCACGTACATCC 60.390 55.000 0.00 0.00 0.00 3.51
115 116 1.446099 AGCACAGCACGTACATCCG 60.446 57.895 0.00 0.00 0.00 4.18
116 117 1.736645 GCACAGCACGTACATCCGT 60.737 57.895 0.00 0.00 42.87 4.69
117 118 1.683790 GCACAGCACGTACATCCGTC 61.684 60.000 0.00 0.00 39.45 4.79
118 119 1.076533 CACAGCACGTACATCCGTCC 61.077 60.000 0.00 0.00 39.45 4.79
119 120 1.214325 CAGCACGTACATCCGTCCA 59.786 57.895 0.00 0.00 39.45 4.02
120 121 0.802222 CAGCACGTACATCCGTCCAG 60.802 60.000 0.00 0.00 39.45 3.86
121 122 2.165301 GCACGTACATCCGTCCAGC 61.165 63.158 0.00 0.00 39.45 4.85
122 123 1.872234 CACGTACATCCGTCCAGCG 60.872 63.158 0.00 0.00 39.45 5.18
123 124 2.042259 ACGTACATCCGTCCAGCGA 61.042 57.895 0.00 0.00 44.77 4.93
124 125 1.585521 CGTACATCCGTCCAGCGAC 60.586 63.158 0.00 0.00 44.77 5.19
125 126 1.509463 GTACATCCGTCCAGCGACA 59.491 57.895 0.00 0.00 44.77 4.35
126 127 0.108992 GTACATCCGTCCAGCGACAA 60.109 55.000 0.00 0.00 44.77 3.18
127 128 0.821517 TACATCCGTCCAGCGACAAT 59.178 50.000 0.00 0.00 44.77 2.71
128 129 0.740868 ACATCCGTCCAGCGACAATG 60.741 55.000 0.00 0.00 44.77 2.82
129 130 0.740868 CATCCGTCCAGCGACAATGT 60.741 55.000 0.00 0.00 44.77 2.71
130 131 0.821517 ATCCGTCCAGCGACAATGTA 59.178 50.000 0.00 0.00 44.77 2.29
131 132 0.821517 TCCGTCCAGCGACAATGTAT 59.178 50.000 0.00 0.00 44.77 2.29
132 133 2.025898 TCCGTCCAGCGACAATGTATA 58.974 47.619 0.00 0.00 44.77 1.47
133 134 2.124903 CCGTCCAGCGACAATGTATAC 58.875 52.381 0.00 0.00 44.77 1.47
134 135 2.223735 CCGTCCAGCGACAATGTATACT 60.224 50.000 4.17 0.00 44.77 2.12
135 136 3.444916 CGTCCAGCGACAATGTATACTT 58.555 45.455 4.17 0.00 44.77 2.24
136 137 3.863424 CGTCCAGCGACAATGTATACTTT 59.137 43.478 4.17 1.05 44.77 2.66
137 138 4.328983 CGTCCAGCGACAATGTATACTTTT 59.671 41.667 4.17 0.00 44.77 2.27
138 139 5.517411 CGTCCAGCGACAATGTATACTTTTA 59.483 40.000 4.17 0.00 44.77 1.52
139 140 6.507456 CGTCCAGCGACAATGTATACTTTTAC 60.507 42.308 4.17 0.63 44.77 2.01
140 141 6.534079 GTCCAGCGACAATGTATACTTTTACT 59.466 38.462 4.17 0.00 38.99 2.24
141 142 6.755141 TCCAGCGACAATGTATACTTTTACTC 59.245 38.462 4.17 0.00 0.00 2.59
142 143 6.533723 CCAGCGACAATGTATACTTTTACTCA 59.466 38.462 4.17 0.00 0.00 3.41
143 144 7.391786 CAGCGACAATGTATACTTTTACTCAC 58.608 38.462 4.17 0.00 0.00 3.51
144 145 6.252869 AGCGACAATGTATACTTTTACTCACG 59.747 38.462 4.17 4.97 0.00 4.35
145 146 6.252015 GCGACAATGTATACTTTTACTCACGA 59.748 38.462 4.17 0.00 0.00 4.35
146 147 7.201376 GCGACAATGTATACTTTTACTCACGAA 60.201 37.037 4.17 0.00 0.00 3.85
147 148 8.804743 CGACAATGTATACTTTTACTCACGAAT 58.195 33.333 4.17 0.00 0.00 3.34
156 157 6.314784 ACTTTTACTCACGAATTATTGCAGC 58.685 36.000 0.00 0.00 0.00 5.25
157 158 4.514545 TTACTCACGAATTATTGCAGCG 57.485 40.909 0.00 0.00 0.00 5.18
158 159 2.346803 ACTCACGAATTATTGCAGCGT 58.653 42.857 0.00 0.00 35.33 5.07
159 160 3.517602 ACTCACGAATTATTGCAGCGTA 58.482 40.909 0.00 0.00 33.45 4.42
160 161 3.551890 ACTCACGAATTATTGCAGCGTAG 59.448 43.478 0.00 0.00 33.45 3.51
180 181 4.498520 CGCTGGCGAGTCGACCAT 62.499 66.667 22.95 0.00 42.83 3.55
181 182 2.583593 GCTGGCGAGTCGACCATC 60.584 66.667 22.95 17.42 34.08 3.51
182 183 2.278206 CTGGCGAGTCGACCATCG 60.278 66.667 22.95 19.50 42.10 3.84
190 191 2.801421 TCGACCATCGAGCTGCTC 59.199 61.111 19.53 19.53 44.82 4.26
191 192 1.750780 TCGACCATCGAGCTGCTCT 60.751 57.895 25.59 8.05 44.82 4.09
192 193 1.299014 CGACCATCGAGCTGCTCTC 60.299 63.158 25.59 15.33 43.74 3.20
193 194 1.723608 CGACCATCGAGCTGCTCTCT 61.724 60.000 25.59 11.05 43.74 3.10
194 195 1.313772 GACCATCGAGCTGCTCTCTA 58.686 55.000 25.59 12.49 39.70 2.43
195 196 1.885887 GACCATCGAGCTGCTCTCTAT 59.114 52.381 25.59 14.08 39.70 1.98
196 197 2.295909 GACCATCGAGCTGCTCTCTATT 59.704 50.000 25.59 8.63 39.70 1.73
197 198 2.295909 ACCATCGAGCTGCTCTCTATTC 59.704 50.000 25.59 0.41 39.70 1.75
198 199 2.557924 CCATCGAGCTGCTCTCTATTCT 59.442 50.000 25.59 1.61 39.70 2.40
199 200 3.366273 CCATCGAGCTGCTCTCTATTCTC 60.366 52.174 25.59 0.00 39.70 2.87
200 201 3.207265 TCGAGCTGCTCTCTATTCTCT 57.793 47.619 25.59 0.00 39.70 3.10
201 202 3.550820 TCGAGCTGCTCTCTATTCTCTT 58.449 45.455 25.59 0.00 39.70 2.85
202 203 3.951037 TCGAGCTGCTCTCTATTCTCTTT 59.049 43.478 25.59 0.00 39.70 2.52
203 204 4.036262 TCGAGCTGCTCTCTATTCTCTTTC 59.964 45.833 25.59 0.00 39.70 2.62
204 205 4.036734 CGAGCTGCTCTCTATTCTCTTTCT 59.963 45.833 25.59 0.00 39.70 2.52
205 206 5.450412 CGAGCTGCTCTCTATTCTCTTTCTT 60.450 44.000 25.59 0.00 39.70 2.52
206 207 6.298441 AGCTGCTCTCTATTCTCTTTCTTT 57.702 37.500 0.00 0.00 0.00 2.52
207 208 6.340522 AGCTGCTCTCTATTCTCTTTCTTTC 58.659 40.000 0.00 0.00 0.00 2.62
208 209 5.231991 GCTGCTCTCTATTCTCTTTCTTTCG 59.768 44.000 0.00 0.00 0.00 3.46
209 210 5.105752 TGCTCTCTATTCTCTTTCTTTCGC 58.894 41.667 0.00 0.00 0.00 4.70
210 211 4.506288 GCTCTCTATTCTCTTTCTTTCGCC 59.494 45.833 0.00 0.00 0.00 5.54
211 212 5.681179 GCTCTCTATTCTCTTTCTTTCGCCT 60.681 44.000 0.00 0.00 0.00 5.52
212 213 5.897050 TCTCTATTCTCTTTCTTTCGCCTC 58.103 41.667 0.00 0.00 0.00 4.70
213 214 4.673441 TCTATTCTCTTTCTTTCGCCTCG 58.327 43.478 0.00 0.00 0.00 4.63
214 215 3.594603 ATTCTCTTTCTTTCGCCTCGA 57.405 42.857 0.00 0.00 0.00 4.04
215 216 3.380479 TTCTCTTTCTTTCGCCTCGAA 57.620 42.857 0.00 0.00 44.28 3.71
216 217 3.594603 TCTCTTTCTTTCGCCTCGAAT 57.405 42.857 2.38 0.00 45.28 3.34
217 218 4.713824 TCTCTTTCTTTCGCCTCGAATA 57.286 40.909 2.38 0.00 45.28 1.75
218 219 5.068234 TCTCTTTCTTTCGCCTCGAATAA 57.932 39.130 2.38 0.00 45.28 1.40
219 220 5.475719 TCTCTTTCTTTCGCCTCGAATAAA 58.524 37.500 2.38 6.26 45.28 1.40
220 221 5.347907 TCTCTTTCTTTCGCCTCGAATAAAC 59.652 40.000 2.38 0.00 45.28 2.01
221 222 5.235516 TCTTTCTTTCGCCTCGAATAAACT 58.764 37.500 2.38 0.00 45.28 2.66
222 223 4.921470 TTCTTTCGCCTCGAATAAACTG 57.079 40.909 2.38 0.00 45.28 3.16
223 224 3.259064 TCTTTCGCCTCGAATAAACTGG 58.741 45.455 2.38 0.00 45.28 4.00
224 225 2.754946 TTCGCCTCGAATAAACTGGT 57.245 45.000 0.00 0.00 41.05 4.00
225 226 2.754946 TCGCCTCGAATAAACTGGTT 57.245 45.000 0.00 0.00 31.06 3.67
226 227 2.613691 TCGCCTCGAATAAACTGGTTC 58.386 47.619 0.00 0.00 31.06 3.62
227 228 1.323534 CGCCTCGAATAAACTGGTTCG 59.676 52.381 1.44 1.44 46.20 3.95
228 229 1.664151 GCCTCGAATAAACTGGTTCGG 59.336 52.381 7.53 0.00 45.23 4.30
229 230 2.933928 GCCTCGAATAAACTGGTTCGGT 60.934 50.000 7.53 0.00 45.23 4.69
230 231 2.671396 CCTCGAATAAACTGGTTCGGTG 59.329 50.000 7.53 2.33 45.23 4.94
231 232 3.581755 CTCGAATAAACTGGTTCGGTGA 58.418 45.455 7.53 0.00 45.23 4.02
232 233 3.991773 CTCGAATAAACTGGTTCGGTGAA 59.008 43.478 7.53 0.00 45.23 3.18
233 234 3.742369 TCGAATAAACTGGTTCGGTGAAC 59.258 43.478 7.53 1.09 45.23 3.18
234 235 3.422603 CGAATAAACTGGTTCGGTGAACG 60.423 47.826 3.82 0.00 42.78 3.95
248 249 4.813296 GGTGAACGAGTGAAAGATTGTT 57.187 40.909 0.00 0.00 0.00 2.83
249 250 5.169836 GGTGAACGAGTGAAAGATTGTTT 57.830 39.130 0.00 0.00 0.00 2.83
250 251 5.578776 GGTGAACGAGTGAAAGATTGTTTT 58.421 37.500 0.00 0.00 0.00 2.43
251 252 6.033966 GGTGAACGAGTGAAAGATTGTTTTT 58.966 36.000 0.00 0.00 0.00 1.94
252 253 6.196538 GGTGAACGAGTGAAAGATTGTTTTTC 59.803 38.462 0.00 0.00 35.59 2.29
253 254 6.745450 GTGAACGAGTGAAAGATTGTTTTTCA 59.255 34.615 0.00 0.00 41.00 2.69
254 255 7.272515 GTGAACGAGTGAAAGATTGTTTTTCAA 59.727 33.333 2.35 0.00 43.76 2.69
255 256 7.272515 TGAACGAGTGAAAGATTGTTTTTCAAC 59.727 33.333 2.35 0.83 43.76 3.18
256 257 6.033966 ACGAGTGAAAGATTGTTTTTCAACC 58.966 36.000 2.35 0.00 43.76 3.77
257 258 6.127730 ACGAGTGAAAGATTGTTTTTCAACCT 60.128 34.615 2.35 0.00 43.76 3.50
258 259 6.751888 CGAGTGAAAGATTGTTTTTCAACCTT 59.248 34.615 2.35 0.00 43.76 3.50
259 260 7.253750 CGAGTGAAAGATTGTTTTTCAACCTTG 60.254 37.037 2.35 0.00 43.76 3.61
260 261 7.386059 AGTGAAAGATTGTTTTTCAACCTTGT 58.614 30.769 2.35 0.00 43.76 3.16
261 262 8.527810 AGTGAAAGATTGTTTTTCAACCTTGTA 58.472 29.630 2.35 0.00 43.76 2.41
262 263 9.313118 GTGAAAGATTGTTTTTCAACCTTGTAT 57.687 29.630 2.35 0.00 43.76 2.29
263 264 9.311916 TGAAAGATTGTTTTTCAACCTTGTATG 57.688 29.630 0.00 0.00 38.81 2.39
264 265 8.661352 AAAGATTGTTTTTCAACCTTGTATGG 57.339 30.769 0.00 0.00 38.81 2.74
265 266 6.223120 AGATTGTTTTTCAACCTTGTATGGC 58.777 36.000 0.00 0.00 38.97 4.40
266 267 5.344743 TTGTTTTTCAACCTTGTATGGCA 57.655 34.783 0.00 0.00 31.02 4.92
267 268 5.543507 TGTTTTTCAACCTTGTATGGCAT 57.456 34.783 4.88 4.88 31.02 4.40
268 269 5.537188 TGTTTTTCAACCTTGTATGGCATC 58.463 37.500 1.65 0.00 31.02 3.91
269 270 5.069648 TGTTTTTCAACCTTGTATGGCATCA 59.930 36.000 1.65 0.00 31.02 3.07
270 271 5.389859 TTTTCAACCTTGTATGGCATCAG 57.610 39.130 1.65 0.00 0.00 2.90
271 272 3.003394 TCAACCTTGTATGGCATCAGG 57.997 47.619 1.65 10.89 0.00 3.86
272 273 2.026641 CAACCTTGTATGGCATCAGGG 58.973 52.381 19.26 19.26 36.95 4.45
273 274 0.552848 ACCTTGTATGGCATCAGGGG 59.447 55.000 22.42 17.78 35.54 4.79
274 275 0.552848 CCTTGTATGGCATCAGGGGT 59.447 55.000 1.65 0.00 0.00 4.95
275 276 1.774254 CCTTGTATGGCATCAGGGGTA 59.226 52.381 1.65 0.00 0.00 3.69
276 277 2.224621 CCTTGTATGGCATCAGGGGTAG 60.225 54.545 1.65 0.00 0.00 3.18
277 278 2.487746 TGTATGGCATCAGGGGTAGA 57.512 50.000 1.65 0.00 0.00 2.59
278 279 2.770447 TGTATGGCATCAGGGGTAGAA 58.230 47.619 1.65 0.00 0.00 2.10
279 280 3.326521 TGTATGGCATCAGGGGTAGAAT 58.673 45.455 1.65 0.00 0.00 2.40
280 281 2.965671 ATGGCATCAGGGGTAGAATG 57.034 50.000 0.00 0.00 0.00 2.67
281 282 0.846015 TGGCATCAGGGGTAGAATGG 59.154 55.000 0.00 0.00 0.00 3.16
282 283 0.846693 GGCATCAGGGGTAGAATGGT 59.153 55.000 0.00 0.00 0.00 3.55
283 284 1.202818 GGCATCAGGGGTAGAATGGTC 60.203 57.143 0.00 0.00 0.00 4.02
284 285 1.771255 GCATCAGGGGTAGAATGGTCT 59.229 52.381 0.00 0.00 37.95 3.85
285 286 2.173569 GCATCAGGGGTAGAATGGTCTT 59.826 50.000 0.00 0.00 35.12 3.01
286 287 3.372025 GCATCAGGGGTAGAATGGTCTTT 60.372 47.826 0.00 0.00 35.12 2.52
287 288 4.860022 CATCAGGGGTAGAATGGTCTTTT 58.140 43.478 0.00 0.00 35.12 2.27
288 289 4.569719 TCAGGGGTAGAATGGTCTTTTC 57.430 45.455 0.00 0.00 35.12 2.29
289 290 3.913799 TCAGGGGTAGAATGGTCTTTTCA 59.086 43.478 0.00 0.00 35.12 2.69
290 291 4.540099 TCAGGGGTAGAATGGTCTTTTCAT 59.460 41.667 0.00 0.00 35.12 2.57
291 292 4.641989 CAGGGGTAGAATGGTCTTTTCATG 59.358 45.833 0.00 0.00 35.12 3.07
292 293 4.292306 AGGGGTAGAATGGTCTTTTCATGT 59.708 41.667 0.00 0.00 35.12 3.21
293 294 5.016831 GGGGTAGAATGGTCTTTTCATGTT 58.983 41.667 0.00 0.00 35.12 2.71
294 295 5.105756 GGGGTAGAATGGTCTTTTCATGTTG 60.106 44.000 0.00 0.00 35.12 3.33
295 296 5.402398 GGTAGAATGGTCTTTTCATGTTGC 58.598 41.667 0.00 0.00 35.12 4.17
296 297 5.048083 GGTAGAATGGTCTTTTCATGTTGCA 60.048 40.000 0.00 0.00 35.12 4.08
297 298 5.733620 AGAATGGTCTTTTCATGTTGCAT 57.266 34.783 0.00 0.00 0.00 3.96
298 299 6.105397 AGAATGGTCTTTTCATGTTGCATT 57.895 33.333 0.00 0.00 0.00 3.56
299 300 6.527423 AGAATGGTCTTTTCATGTTGCATTT 58.473 32.000 0.00 0.00 0.00 2.32
300 301 7.669427 AGAATGGTCTTTTCATGTTGCATTTA 58.331 30.769 0.00 0.00 0.00 1.40
301 302 8.149647 AGAATGGTCTTTTCATGTTGCATTTAA 58.850 29.630 0.00 0.00 0.00 1.52
302 303 7.656707 ATGGTCTTTTCATGTTGCATTTAAC 57.343 32.000 0.00 0.00 0.00 2.01
303 304 6.577103 TGGTCTTTTCATGTTGCATTTAACA 58.423 32.000 0.00 0.00 43.93 2.41
304 305 6.478344 TGGTCTTTTCATGTTGCATTTAACAC 59.522 34.615 0.00 0.00 42.74 3.32
305 306 6.701400 GGTCTTTTCATGTTGCATTTAACACT 59.299 34.615 0.00 0.00 42.74 3.55
306 307 7.306749 GGTCTTTTCATGTTGCATTTAACACTG 60.307 37.037 0.00 0.00 42.74 3.66
307 308 7.222611 GTCTTTTCATGTTGCATTTAACACTGT 59.777 33.333 0.00 0.00 42.74 3.55
308 309 7.763528 TCTTTTCATGTTGCATTTAACACTGTT 59.236 29.630 0.00 0.00 42.74 3.16
309 310 7.840342 TTTCATGTTGCATTTAACACTGTTT 57.160 28.000 0.00 0.00 42.74 2.83
310 311 6.825284 TCATGTTGCATTTAACACTGTTTG 57.175 33.333 0.00 0.00 42.74 2.93
311 312 6.336566 TCATGTTGCATTTAACACTGTTTGT 58.663 32.000 0.00 0.00 42.74 2.83
315 316 4.677584 TGCATTTAACACTGTTTGTGGTC 58.322 39.130 0.00 0.00 44.54 4.02
316 317 4.158579 TGCATTTAACACTGTTTGTGGTCA 59.841 37.500 0.00 0.00 44.54 4.02
317 318 5.105752 GCATTTAACACTGTTTGTGGTCAA 58.894 37.500 0.00 0.00 44.54 3.18
318 319 5.578727 GCATTTAACACTGTTTGTGGTCAAA 59.421 36.000 0.00 0.00 44.54 2.69
330 331 5.353394 TTGTGGTCAAACTAGACAGAAGT 57.647 39.130 0.00 0.00 40.29 3.01
331 332 4.693283 TGTGGTCAAACTAGACAGAAGTG 58.307 43.478 0.00 0.00 40.29 3.16
332 333 4.161565 TGTGGTCAAACTAGACAGAAGTGT 59.838 41.667 0.00 0.00 40.29 3.55
333 334 8.534866 TTTGTGGTCAAACTAGACAGAAGTGTC 61.535 40.741 0.00 0.00 43.90 3.67
344 345 4.273148 ACAGAAGTGTCACATAGGGAAC 57.727 45.455 5.62 0.00 26.76 3.62
345 346 3.646162 ACAGAAGTGTCACATAGGGAACA 59.354 43.478 5.62 0.00 26.76 3.18
346 347 4.102524 ACAGAAGTGTCACATAGGGAACAA 59.897 41.667 5.62 0.00 26.76 2.83
347 348 5.063204 CAGAAGTGTCACATAGGGAACAAA 58.937 41.667 5.62 0.00 0.00 2.83
348 349 5.707298 CAGAAGTGTCACATAGGGAACAAAT 59.293 40.000 5.62 0.00 0.00 2.32
349 350 6.207417 CAGAAGTGTCACATAGGGAACAAATT 59.793 38.462 5.62 0.00 0.00 1.82
350 351 6.777580 AGAAGTGTCACATAGGGAACAAATTT 59.222 34.615 5.62 0.00 0.00 1.82
351 352 6.976934 AGTGTCACATAGGGAACAAATTTT 57.023 33.333 5.62 0.00 0.00 1.82
352 353 8.472007 AAGTGTCACATAGGGAACAAATTTTA 57.528 30.769 5.62 0.00 0.00 1.52
353 354 7.882179 AGTGTCACATAGGGAACAAATTTTAC 58.118 34.615 5.62 0.00 0.00 2.01
354 355 7.504238 AGTGTCACATAGGGAACAAATTTTACA 59.496 33.333 5.62 0.00 0.00 2.41
355 356 8.303876 GTGTCACATAGGGAACAAATTTTACAT 58.696 33.333 0.00 0.00 0.00 2.29
356 357 8.865090 TGTCACATAGGGAACAAATTTTACATT 58.135 29.630 0.00 0.00 0.00 2.71
357 358 9.705290 GTCACATAGGGAACAAATTTTACATTT 57.295 29.630 0.00 0.00 0.00 2.32
358 359 9.703892 TCACATAGGGAACAAATTTTACATTTG 57.296 29.630 2.68 2.68 42.81 2.32
359 360 8.934825 CACATAGGGAACAAATTTTACATTTGG 58.065 33.333 8.43 0.00 41.80 3.28
360 361 8.100164 ACATAGGGAACAAATTTTACATTTGGG 58.900 33.333 8.43 0.00 41.80 4.12
361 362 5.875224 AGGGAACAAATTTTACATTTGGGG 58.125 37.500 8.43 0.00 41.80 4.96
362 363 5.371176 AGGGAACAAATTTTACATTTGGGGT 59.629 36.000 8.43 0.00 41.80 4.95
363 364 5.703592 GGGAACAAATTTTACATTTGGGGTC 59.296 40.000 8.43 3.43 41.80 4.46
364 365 6.292150 GGAACAAATTTTACATTTGGGGTCA 58.708 36.000 8.43 0.00 41.80 4.02
365 366 6.768381 GGAACAAATTTTACATTTGGGGTCAA 59.232 34.615 8.43 0.00 41.80 3.18
366 367 7.283354 GGAACAAATTTTACATTTGGGGTCAAA 59.717 33.333 8.43 0.00 45.61 2.69
376 377 4.750833 TTTGGGGTCAAATAGGGAAGAA 57.249 40.909 0.00 0.00 37.89 2.52
377 378 4.750833 TTGGGGTCAAATAGGGAAGAAA 57.249 40.909 0.00 0.00 0.00 2.52
378 379 4.750833 TGGGGTCAAATAGGGAAGAAAA 57.249 40.909 0.00 0.00 0.00 2.29
379 380 5.081315 TGGGGTCAAATAGGGAAGAAAAA 57.919 39.130 0.00 0.00 0.00 1.94
380 381 4.836175 TGGGGTCAAATAGGGAAGAAAAAC 59.164 41.667 0.00 0.00 0.00 2.43
381 382 5.084519 GGGGTCAAATAGGGAAGAAAAACT 58.915 41.667 0.00 0.00 0.00 2.66
382 383 5.542635 GGGGTCAAATAGGGAAGAAAAACTT 59.457 40.000 0.00 0.00 42.03 2.66
383 384 6.042781 GGGGTCAAATAGGGAAGAAAAACTTT 59.957 38.462 0.00 0.00 39.13 2.66
384 385 7.419750 GGGGTCAAATAGGGAAGAAAAACTTTT 60.420 37.037 0.00 0.00 39.13 2.27
385 386 7.990886 GGGTCAAATAGGGAAGAAAAACTTTTT 59.009 33.333 0.00 0.00 39.13 1.94
403 404 3.694043 TTTTGGGCCAAATAAGGAAGC 57.306 42.857 30.82 0.00 33.19 3.86
404 405 2.317371 TTGGGCCAAATAAGGAAGCA 57.683 45.000 18.51 0.00 0.00 3.91
405 406 2.317371 TGGGCCAAATAAGGAAGCAA 57.683 45.000 2.13 0.00 0.00 3.91
406 407 2.614259 TGGGCCAAATAAGGAAGCAAA 58.386 42.857 2.13 0.00 0.00 3.68
407 408 2.301583 TGGGCCAAATAAGGAAGCAAAC 59.698 45.455 2.13 0.00 0.00 2.93
408 409 2.567169 GGGCCAAATAAGGAAGCAAACT 59.433 45.455 4.39 0.00 0.00 2.66
409 410 3.007940 GGGCCAAATAAGGAAGCAAACTT 59.992 43.478 4.39 0.00 39.43 2.66
410 411 4.504864 GGGCCAAATAAGGAAGCAAACTTT 60.505 41.667 4.39 0.00 35.82 2.66
411 412 5.279758 GGGCCAAATAAGGAAGCAAACTTTA 60.280 40.000 4.39 0.00 35.82 1.85
412 413 6.227522 GGCCAAATAAGGAAGCAAACTTTAA 58.772 36.000 0.00 0.00 35.82 1.52
413 414 6.368791 GGCCAAATAAGGAAGCAAACTTTAAG 59.631 38.462 0.00 0.00 35.82 1.85
414 415 7.151976 GCCAAATAAGGAAGCAAACTTTAAGA 58.848 34.615 0.00 0.00 35.82 2.10
415 416 7.655732 GCCAAATAAGGAAGCAAACTTTAAGAA 59.344 33.333 0.00 0.00 35.82 2.52
416 417 9.541143 CCAAATAAGGAAGCAAACTTTAAGAAA 57.459 29.630 0.00 0.00 35.82 2.52
418 419 9.764363 AAATAAGGAAGCAAACTTTAAGAAAGG 57.236 29.630 0.00 0.00 42.82 3.11
419 420 5.791336 AGGAAGCAAACTTTAAGAAAGGG 57.209 39.130 0.00 0.00 42.82 3.95
420 421 4.039245 AGGAAGCAAACTTTAAGAAAGGGC 59.961 41.667 0.00 4.68 42.82 5.19
421 422 4.307432 GAAGCAAACTTTAAGAAAGGGCC 58.693 43.478 0.00 0.00 42.82 5.80
422 423 3.304829 AGCAAACTTTAAGAAAGGGCCA 58.695 40.909 6.18 0.00 42.82 5.36
423 424 3.709141 AGCAAACTTTAAGAAAGGGCCAA 59.291 39.130 6.18 0.00 42.82 4.52
424 425 4.163268 AGCAAACTTTAAGAAAGGGCCAAA 59.837 37.500 6.18 0.00 42.82 3.28
425 426 5.063204 GCAAACTTTAAGAAAGGGCCAAAT 58.937 37.500 6.18 0.00 42.82 2.32
426 427 6.042666 AGCAAACTTTAAGAAAGGGCCAAATA 59.957 34.615 6.18 0.00 42.82 1.40
427 428 6.708502 GCAAACTTTAAGAAAGGGCCAAATAA 59.291 34.615 6.18 0.00 42.82 1.40
428 429 7.095229 GCAAACTTTAAGAAAGGGCCAAATAAG 60.095 37.037 6.18 2.37 42.82 1.73
429 430 6.605471 ACTTTAAGAAAGGGCCAAATAAGG 57.395 37.500 6.18 1.01 42.82 2.69
430 431 6.319715 ACTTTAAGAAAGGGCCAAATAAGGA 58.680 36.000 6.18 0.00 42.82 3.36
431 432 6.785466 ACTTTAAGAAAGGGCCAAATAAGGAA 59.215 34.615 6.18 0.00 42.82 3.36
432 433 7.457852 ACTTTAAGAAAGGGCCAAATAAGGAAT 59.542 33.333 6.18 0.00 42.82 3.01
433 434 7.806680 TTAAGAAAGGGCCAAATAAGGAATT 57.193 32.000 6.18 0.00 0.00 2.17
434 435 5.939764 AGAAAGGGCCAAATAAGGAATTC 57.060 39.130 6.18 0.00 0.00 2.17
435 436 5.593786 AGAAAGGGCCAAATAAGGAATTCT 58.406 37.500 6.18 0.00 0.00 2.40
436 437 5.658634 AGAAAGGGCCAAATAAGGAATTCTC 59.341 40.000 6.18 0.00 0.00 2.87
437 438 4.888626 AGGGCCAAATAAGGAATTCTCT 57.111 40.909 6.18 0.00 0.00 3.10
438 439 4.797743 AGGGCCAAATAAGGAATTCTCTC 58.202 43.478 6.18 0.00 0.00 3.20
439 440 4.480166 AGGGCCAAATAAGGAATTCTCTCT 59.520 41.667 6.18 0.00 0.00 3.10
440 441 5.672194 AGGGCCAAATAAGGAATTCTCTCTA 59.328 40.000 6.18 0.00 0.00 2.43
441 442 6.000840 GGGCCAAATAAGGAATTCTCTCTAG 58.999 44.000 4.39 0.00 0.00 2.43
442 443 6.000840 GGCCAAATAAGGAATTCTCTCTAGG 58.999 44.000 5.23 1.71 0.00 3.02
443 444 6.000840 GCCAAATAAGGAATTCTCTCTAGGG 58.999 44.000 5.23 2.08 0.00 3.53
444 445 6.409810 GCCAAATAAGGAATTCTCTCTAGGGT 60.410 42.308 5.23 0.00 0.00 4.34
445 446 7.202102 GCCAAATAAGGAATTCTCTCTAGGGTA 60.202 40.741 5.23 0.00 0.00 3.69
446 447 8.885346 CCAAATAAGGAATTCTCTCTAGGGTAT 58.115 37.037 5.23 0.00 0.00 2.73
447 448 9.717942 CAAATAAGGAATTCTCTCTAGGGTATG 57.282 37.037 5.23 0.00 0.00 2.39
448 449 9.453830 AAATAAGGAATTCTCTCTAGGGTATGT 57.546 33.333 5.23 0.00 0.00 2.29
449 450 6.739331 AAGGAATTCTCTCTAGGGTATGTG 57.261 41.667 5.23 0.00 0.00 3.21
450 451 5.782925 AGGAATTCTCTCTAGGGTATGTGT 58.217 41.667 5.23 0.00 0.00 3.72
451 452 5.600484 AGGAATTCTCTCTAGGGTATGTGTG 59.400 44.000 5.23 0.00 0.00 3.82
452 453 5.364157 GGAATTCTCTCTAGGGTATGTGTGT 59.636 44.000 5.23 0.00 0.00 3.72
453 454 5.860941 ATTCTCTCTAGGGTATGTGTGTG 57.139 43.478 0.00 0.00 0.00 3.82
454 455 4.317530 TCTCTCTAGGGTATGTGTGTGT 57.682 45.455 0.00 0.00 0.00 3.72
455 456 4.017126 TCTCTCTAGGGTATGTGTGTGTG 58.983 47.826 0.00 0.00 0.00 3.82
456 457 2.496070 TCTCTAGGGTATGTGTGTGTGC 59.504 50.000 0.00 0.00 0.00 4.57
457 458 2.497675 CTCTAGGGTATGTGTGTGTGCT 59.502 50.000 0.00 0.00 0.00 4.40
458 459 2.496070 TCTAGGGTATGTGTGTGTGCTC 59.504 50.000 0.00 0.00 0.00 4.26
459 460 1.055849 AGGGTATGTGTGTGTGCTCA 58.944 50.000 0.00 0.00 0.00 4.26
460 461 1.630369 AGGGTATGTGTGTGTGCTCAT 59.370 47.619 0.00 0.00 0.00 2.90
461 462 2.837591 AGGGTATGTGTGTGTGCTCATA 59.162 45.455 0.00 0.00 0.00 2.15
462 463 3.118629 AGGGTATGTGTGTGTGCTCATAG 60.119 47.826 0.00 0.00 0.00 2.23
463 464 3.118775 GGGTATGTGTGTGTGCTCATAGA 60.119 47.826 0.00 0.00 0.00 1.98
464 465 4.503910 GGTATGTGTGTGTGCTCATAGAA 58.496 43.478 0.00 0.00 0.00 2.10
465 466 4.568359 GGTATGTGTGTGTGCTCATAGAAG 59.432 45.833 0.00 0.00 0.00 2.85
466 467 3.751479 TGTGTGTGTGCTCATAGAAGT 57.249 42.857 0.00 0.00 0.00 3.01
467 468 3.392882 TGTGTGTGTGCTCATAGAAGTG 58.607 45.455 0.00 0.00 0.00 3.16
468 469 3.069443 TGTGTGTGTGCTCATAGAAGTGA 59.931 43.478 0.00 0.00 0.00 3.41
469 470 3.677121 GTGTGTGTGCTCATAGAAGTGAG 59.323 47.826 0.00 0.00 46.59 3.51
470 471 3.321968 TGTGTGTGCTCATAGAAGTGAGT 59.678 43.478 5.87 0.00 45.80 3.41
471 472 3.677121 GTGTGTGCTCATAGAAGTGAGTG 59.323 47.826 5.87 0.00 45.80 3.51
472 473 3.321968 TGTGTGCTCATAGAAGTGAGTGT 59.678 43.478 5.87 0.00 45.80 3.55
473 474 4.522789 TGTGTGCTCATAGAAGTGAGTGTA 59.477 41.667 5.87 0.00 45.80 2.90
474 475 5.185828 TGTGTGCTCATAGAAGTGAGTGTAT 59.814 40.000 5.87 0.00 45.80 2.29
475 476 5.518128 GTGTGCTCATAGAAGTGAGTGTATG 59.482 44.000 5.87 0.00 45.80 2.39
476 477 5.185828 TGTGCTCATAGAAGTGAGTGTATGT 59.814 40.000 5.87 0.00 45.80 2.29
477 478 6.377146 TGTGCTCATAGAAGTGAGTGTATGTA 59.623 38.462 5.87 0.00 45.80 2.29
478 479 6.693545 GTGCTCATAGAAGTGAGTGTATGTAC 59.306 42.308 5.87 0.00 45.80 2.90
479 480 5.910166 GCTCATAGAAGTGAGTGTATGTACG 59.090 44.000 5.87 0.00 45.80 3.67
480 481 6.458478 GCTCATAGAAGTGAGTGTATGTACGT 60.458 42.308 0.00 0.00 45.80 3.57
481 482 6.782150 TCATAGAAGTGAGTGTATGTACGTG 58.218 40.000 0.00 0.00 0.00 4.49
482 483 6.373495 TCATAGAAGTGAGTGTATGTACGTGT 59.627 38.462 0.00 0.00 0.00 4.49
483 484 7.550196 TCATAGAAGTGAGTGTATGTACGTGTA 59.450 37.037 0.00 0.00 0.00 2.90
484 485 6.754702 AGAAGTGAGTGTATGTACGTGTAT 57.245 37.500 0.00 0.00 0.00 2.29
485 486 6.552629 AGAAGTGAGTGTATGTACGTGTATG 58.447 40.000 0.00 0.00 0.00 2.39
486 487 5.892160 AGTGAGTGTATGTACGTGTATGT 57.108 39.130 0.00 0.00 0.00 2.29
487 488 5.637809 AGTGAGTGTATGTACGTGTATGTG 58.362 41.667 0.00 0.00 0.00 3.21
488 489 5.182570 AGTGAGTGTATGTACGTGTATGTGT 59.817 40.000 0.00 0.00 0.00 3.72
489 490 5.285370 GTGAGTGTATGTACGTGTATGTGTG 59.715 44.000 0.00 0.00 0.00 3.82
490 491 5.181622 TGAGTGTATGTACGTGTATGTGTGA 59.818 40.000 0.00 0.00 0.00 3.58
491 492 5.637809 AGTGTATGTACGTGTATGTGTGAG 58.362 41.667 0.00 0.00 0.00 3.51
492 493 4.796830 GTGTATGTACGTGTATGTGTGAGG 59.203 45.833 0.00 0.00 0.00 3.86
493 494 4.460034 TGTATGTACGTGTATGTGTGAGGT 59.540 41.667 0.00 0.00 0.00 3.85
494 495 4.530710 ATGTACGTGTATGTGTGAGGTT 57.469 40.909 0.00 0.00 0.00 3.50
495 496 3.904571 TGTACGTGTATGTGTGAGGTTC 58.095 45.455 0.00 0.00 0.00 3.62
496 497 3.570975 TGTACGTGTATGTGTGAGGTTCT 59.429 43.478 0.00 0.00 0.00 3.01
497 498 3.299340 ACGTGTATGTGTGAGGTTCTC 57.701 47.619 0.00 0.00 0.00 2.87
498 499 2.029290 ACGTGTATGTGTGAGGTTCTCC 60.029 50.000 0.00 0.00 0.00 3.71
499 500 2.607187 GTGTATGTGTGAGGTTCTCCG 58.393 52.381 0.00 0.00 39.05 4.63
500 501 2.029290 GTGTATGTGTGAGGTTCTCCGT 60.029 50.000 0.00 0.00 39.05 4.69
501 502 2.230508 TGTATGTGTGAGGTTCTCCGTC 59.769 50.000 0.00 0.00 39.05 4.79
502 503 1.633774 ATGTGTGAGGTTCTCCGTCT 58.366 50.000 0.00 0.00 39.05 4.18
503 504 0.673985 TGTGTGAGGTTCTCCGTCTG 59.326 55.000 0.00 0.00 39.05 3.51
504 505 0.674534 GTGTGAGGTTCTCCGTCTGT 59.325 55.000 0.00 0.00 39.05 3.41
505 506 1.884579 GTGTGAGGTTCTCCGTCTGTA 59.115 52.381 0.00 0.00 39.05 2.74
506 507 2.095161 GTGTGAGGTTCTCCGTCTGTAG 60.095 54.545 0.00 0.00 39.05 2.74
507 508 2.161030 GTGAGGTTCTCCGTCTGTAGT 58.839 52.381 0.00 0.00 39.05 2.73
508 509 3.244665 TGTGAGGTTCTCCGTCTGTAGTA 60.245 47.826 0.00 0.00 39.05 1.82
509 510 3.946558 GTGAGGTTCTCCGTCTGTAGTAT 59.053 47.826 0.00 0.00 39.05 2.12
510 511 3.945921 TGAGGTTCTCCGTCTGTAGTATG 59.054 47.826 0.00 0.00 39.05 2.39
511 512 3.946558 GAGGTTCTCCGTCTGTAGTATGT 59.053 47.826 0.00 0.00 39.05 2.29
512 513 3.695060 AGGTTCTCCGTCTGTAGTATGTG 59.305 47.826 0.00 0.00 39.05 3.21
513 514 3.442977 GGTTCTCCGTCTGTAGTATGTGT 59.557 47.826 0.00 0.00 0.00 3.72
514 515 4.413087 GTTCTCCGTCTGTAGTATGTGTG 58.587 47.826 0.00 0.00 0.00 3.82
515 516 3.682696 TCTCCGTCTGTAGTATGTGTGT 58.317 45.455 0.00 0.00 0.00 3.72
516 517 4.077108 TCTCCGTCTGTAGTATGTGTGTT 58.923 43.478 0.00 0.00 0.00 3.32
517 518 4.521639 TCTCCGTCTGTAGTATGTGTGTTT 59.478 41.667 0.00 0.00 0.00 2.83
518 519 5.010314 TCTCCGTCTGTAGTATGTGTGTTTT 59.990 40.000 0.00 0.00 0.00 2.43
519 520 5.603596 TCCGTCTGTAGTATGTGTGTTTTT 58.396 37.500 0.00 0.00 0.00 1.94
603 604 1.156736 GCGTGACTACATGGCAAACT 58.843 50.000 0.00 0.00 34.07 2.66
638 639 7.013369 ACCCAAAGTTGATGTAAAAAGAGAGAC 59.987 37.037 0.00 0.00 0.00 3.36
643 646 9.832445 AAGTTGATGTAAAAAGAGAGACACTAA 57.168 29.630 0.00 0.00 0.00 2.24
658 661 7.142021 AGAGACACTAATATGCGTGATAACAG 58.858 38.462 10.60 0.00 35.23 3.16
667 670 1.082117 CGTGATAACAGGGCGGTCAC 61.082 60.000 0.00 0.00 36.67 3.67
703 4468 4.093850 ACCGATATTTGTTTCAACTACGGC 59.906 41.667 0.00 0.00 40.17 5.68
738 4503 4.888239 TGGAAAGAAATACCACCGTTTCAA 59.112 37.500 0.00 0.00 36.92 2.69
741 4506 5.385509 AAGAAATACCACCGTTTCAATGG 57.614 39.130 0.00 0.00 41.00 3.16
754 4519 1.753930 TCAATGGCAAGCGTGATCAT 58.246 45.000 2.99 3.51 0.00 2.45
849 4614 9.507329 ACCACTGTATCATTAACATCCATATTC 57.493 33.333 0.00 0.00 0.00 1.75
883 4653 4.480115 TCCCGCCATCTATCTTTTCTCTA 58.520 43.478 0.00 0.00 0.00 2.43
922 4695 7.698130 GTCCATACAATACTCAAAACATTCAGC 59.302 37.037 0.00 0.00 0.00 4.26
938 4712 4.782019 TTCAGCAGTCAAAACACAAACT 57.218 36.364 0.00 0.00 0.00 2.66
943 4717 7.414436 TCAGCAGTCAAAACACAAACTATTAC 58.586 34.615 0.00 0.00 0.00 1.89
997 4771 3.058432 TGATACATCGCCTAGCTACGAAC 60.058 47.826 10.11 2.50 42.31 3.95
1103 4877 5.012046 AGTGACAATGGATGACTAGACACAA 59.988 40.000 0.00 0.00 0.00 3.33
1307 5103 6.370994 CCAAGATGCTGCCTAGATAAACATAG 59.629 42.308 0.00 0.00 0.00 2.23
1394 5190 5.437289 TCAATTTCAGTTTCGTCTGCAAT 57.563 34.783 0.00 0.00 34.04 3.56
1398 5194 1.792367 TCAGTTTCGTCTGCAATCGTG 59.208 47.619 9.42 2.40 35.63 4.35
1416 5224 1.025041 TGTCCTCGTCCTCATCATCG 58.975 55.000 0.00 0.00 0.00 3.84
1602 5412 6.609237 ATGATGGATGAGTTGTATGAAACG 57.391 37.500 0.00 0.00 35.13 3.60
1749 5601 7.010771 ACCCTAGAGCTACAAAAAGGAAAAAT 58.989 34.615 0.00 0.00 0.00 1.82
1776 5628 2.365408 AACCTACAACAGCTCTACGC 57.635 50.000 0.00 0.00 39.57 4.42
1782 5634 1.734477 AACAGCTCTACGCGCACAG 60.734 57.895 5.73 3.10 45.59 3.66
1893 5745 4.720443 AAGGCCCAGGACCCCCAT 62.720 66.667 0.00 0.00 33.88 4.00
2086 5948 1.200519 CGGGGATAGGGTTCTCAACA 58.799 55.000 0.00 0.00 0.00 3.33
2100 5962 1.265095 CTCAACATCGGCCATATGCAC 59.735 52.381 13.68 0.00 43.89 4.57
2103 5965 1.159713 ACATCGGCCATATGCACGTG 61.160 55.000 12.28 12.28 43.89 4.49
2147 6010 1.098712 TGGGTGTGCTCGTTGGTTTC 61.099 55.000 0.00 0.00 0.00 2.78
2225 6088 7.435068 TTTTTAGTTCCTTCCTTTCTCATCG 57.565 36.000 0.00 0.00 0.00 3.84
2243 6106 8.848474 TCTCATCGTTATTTTCTTCCTTCTTT 57.152 30.769 0.00 0.00 0.00 2.52
2248 6111 9.678941 ATCGTTATTTTCTTCCTTCTTTGTTTC 57.321 29.630 0.00 0.00 0.00 2.78
2249 6112 7.853929 TCGTTATTTTCTTCCTTCTTTGTTTCG 59.146 33.333 0.00 0.00 0.00 3.46
2250 6113 7.112984 CGTTATTTTCTTCCTTCTTTGTTTCGG 59.887 37.037 0.00 0.00 0.00 4.30
2287 6167 4.750598 TCAAACATACGTCGACATGGAAAA 59.249 37.500 17.16 0.00 0.00 2.29
2291 6171 2.736144 ACGTCGACATGGAAAAGCTA 57.264 45.000 17.16 0.00 0.00 3.32
2358 6249 4.789012 ATCAAGTACTCCGTCCGTTTTA 57.211 40.909 0.00 0.00 0.00 1.52
2359 6250 4.789012 TCAAGTACTCCGTCCGTTTTAT 57.211 40.909 0.00 0.00 0.00 1.40
2361 6252 5.163513 TCAAGTACTCCGTCCGTTTTATTC 58.836 41.667 0.00 0.00 0.00 1.75
2362 6253 4.789012 AGTACTCCGTCCGTTTTATTCA 57.211 40.909 0.00 0.00 0.00 2.57
2363 6254 4.488879 AGTACTCCGTCCGTTTTATTCAC 58.511 43.478 0.00 0.00 0.00 3.18
2364 6255 3.672767 ACTCCGTCCGTTTTATTCACT 57.327 42.857 0.00 0.00 0.00 3.41
2365 6256 3.999046 ACTCCGTCCGTTTTATTCACTT 58.001 40.909 0.00 0.00 0.00 3.16
2367 6258 4.212636 ACTCCGTCCGTTTTATTCACTTTG 59.787 41.667 0.00 0.00 0.00 2.77
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.586422 ATCATCCATCTTTCCGTGCG 58.414 50.000 0.00 0.00 0.00 5.34
1 2 4.380531 TCTAATCATCCATCTTTCCGTGC 58.619 43.478 0.00 0.00 0.00 5.34
2 3 5.049818 GCTTCTAATCATCCATCTTTCCGTG 60.050 44.000 0.00 0.00 0.00 4.94
3 4 5.059833 GCTTCTAATCATCCATCTTTCCGT 58.940 41.667 0.00 0.00 0.00 4.69
4 5 4.151335 CGCTTCTAATCATCCATCTTTCCG 59.849 45.833 0.00 0.00 0.00 4.30
5 6 4.453819 CCGCTTCTAATCATCCATCTTTCC 59.546 45.833 0.00 0.00 0.00 3.13
6 7 4.453819 CCCGCTTCTAATCATCCATCTTTC 59.546 45.833 0.00 0.00 0.00 2.62
7 8 4.392940 CCCGCTTCTAATCATCCATCTTT 58.607 43.478 0.00 0.00 0.00 2.52
8 9 3.808618 GCCCGCTTCTAATCATCCATCTT 60.809 47.826 0.00 0.00 0.00 2.40
9 10 2.289945 GCCCGCTTCTAATCATCCATCT 60.290 50.000 0.00 0.00 0.00 2.90
10 11 2.079925 GCCCGCTTCTAATCATCCATC 58.920 52.381 0.00 0.00 0.00 3.51
11 12 1.701847 AGCCCGCTTCTAATCATCCAT 59.298 47.619 0.00 0.00 0.00 3.41
12 13 1.131638 AGCCCGCTTCTAATCATCCA 58.868 50.000 0.00 0.00 0.00 3.41
13 14 3.618690 ATAGCCCGCTTCTAATCATCC 57.381 47.619 0.00 0.00 0.00 3.51
14 15 3.614616 CGAATAGCCCGCTTCTAATCATC 59.385 47.826 0.00 0.00 0.00 2.92
15 16 3.258372 TCGAATAGCCCGCTTCTAATCAT 59.742 43.478 0.00 0.00 0.00 2.45
16 17 2.626266 TCGAATAGCCCGCTTCTAATCA 59.374 45.455 0.00 0.00 0.00 2.57
17 18 3.299340 TCGAATAGCCCGCTTCTAATC 57.701 47.619 0.00 0.00 0.00 1.75
18 19 3.258372 TCATCGAATAGCCCGCTTCTAAT 59.742 43.478 0.00 0.00 0.00 1.73
19 20 2.626266 TCATCGAATAGCCCGCTTCTAA 59.374 45.455 0.00 0.00 0.00 2.10
20 21 2.235891 TCATCGAATAGCCCGCTTCTA 58.764 47.619 0.00 0.00 0.00 2.10
21 22 1.040646 TCATCGAATAGCCCGCTTCT 58.959 50.000 0.00 0.00 0.00 2.85
22 23 1.865865 TTCATCGAATAGCCCGCTTC 58.134 50.000 0.00 0.00 0.00 3.86
23 24 2.417719 GATTCATCGAATAGCCCGCTT 58.582 47.619 0.00 0.00 31.89 4.68
24 25 2.086054 GATTCATCGAATAGCCCGCT 57.914 50.000 0.00 0.00 31.89 5.52
36 37 5.366829 TTTCATGCATGGATCGATTCATC 57.633 39.130 25.97 11.71 0.00 2.92
37 38 5.977489 ATTTCATGCATGGATCGATTCAT 57.023 34.783 25.97 13.73 0.00 2.57
38 39 7.825761 AGTATATTTCATGCATGGATCGATTCA 59.174 33.333 25.97 9.29 0.00 2.57
39 40 8.206325 AGTATATTTCATGCATGGATCGATTC 57.794 34.615 25.97 9.24 0.00 2.52
40 41 9.322773 CTAGTATATTTCATGCATGGATCGATT 57.677 33.333 25.97 9.07 0.00 3.34
41 42 8.481314 ACTAGTATATTTCATGCATGGATCGAT 58.519 33.333 25.97 11.08 0.00 3.59
42 43 7.761249 CACTAGTATATTTCATGCATGGATCGA 59.239 37.037 25.97 3.32 0.00 3.59
43 44 7.761249 TCACTAGTATATTTCATGCATGGATCG 59.239 37.037 25.97 0.21 0.00 3.69
44 45 9.440773 TTCACTAGTATATTTCATGCATGGATC 57.559 33.333 25.97 9.26 0.00 3.36
45 46 9.970553 ATTCACTAGTATATTTCATGCATGGAT 57.029 29.630 25.97 20.68 0.00 3.41
59 60 9.807649 CTGCATGCATGTATATTCACTAGTATA 57.192 33.333 26.79 0.00 0.00 1.47
60 61 7.767659 CCTGCATGCATGTATATTCACTAGTAT 59.232 37.037 26.79 0.00 0.00 2.12
61 62 7.039082 TCCTGCATGCATGTATATTCACTAGTA 60.039 37.037 26.79 0.00 0.00 1.82
62 63 5.936372 CCTGCATGCATGTATATTCACTAGT 59.064 40.000 26.79 0.00 0.00 2.57
63 64 6.168389 TCCTGCATGCATGTATATTCACTAG 58.832 40.000 26.79 8.06 0.00 2.57
64 65 6.112927 TCCTGCATGCATGTATATTCACTA 57.887 37.500 26.79 0.00 0.00 2.74
65 66 4.976864 TCCTGCATGCATGTATATTCACT 58.023 39.130 26.79 0.00 0.00 3.41
66 67 5.694231 TTCCTGCATGCATGTATATTCAC 57.306 39.130 26.79 8.94 0.00 3.18
67 68 6.712179 TTTTCCTGCATGCATGTATATTCA 57.288 33.333 26.79 14.27 0.00 2.57
68 69 7.205297 AGTTTTTCCTGCATGCATGTATATTC 58.795 34.615 26.79 10.36 0.00 1.75
69 70 7.116075 AGTTTTTCCTGCATGCATGTATATT 57.884 32.000 26.79 1.06 0.00 1.28
70 71 6.720112 AGTTTTTCCTGCATGCATGTATAT 57.280 33.333 26.79 0.60 0.00 0.86
71 72 6.528537 AAGTTTTTCCTGCATGCATGTATA 57.471 33.333 26.79 11.66 0.00 1.47
72 73 5.410355 AAGTTTTTCCTGCATGCATGTAT 57.590 34.783 26.79 3.01 0.00 2.29
73 74 4.870123 AAGTTTTTCCTGCATGCATGTA 57.130 36.364 26.79 21.99 0.00 2.29
74 75 3.756933 AAGTTTTTCCTGCATGCATGT 57.243 38.095 26.79 0.00 0.00 3.21
75 76 4.059511 TGAAAGTTTTTCCTGCATGCATG 58.940 39.130 22.97 22.70 0.00 4.06
76 77 4.312443 CTGAAAGTTTTTCCTGCATGCAT 58.688 39.130 22.97 1.00 0.00 3.96
77 78 3.719924 CTGAAAGTTTTTCCTGCATGCA 58.280 40.909 21.29 21.29 0.00 3.96
78 79 2.477754 GCTGAAAGTTTTTCCTGCATGC 59.522 45.455 11.82 11.82 35.30 4.06
79 80 3.492011 GTGCTGAAAGTTTTTCCTGCATG 59.508 43.478 16.37 0.00 35.30 4.06
80 81 3.132646 TGTGCTGAAAGTTTTTCCTGCAT 59.867 39.130 16.37 0.00 35.30 3.96
81 82 2.495270 TGTGCTGAAAGTTTTTCCTGCA 59.505 40.909 12.14 12.14 35.30 4.41
82 83 3.118542 CTGTGCTGAAAGTTTTTCCTGC 58.881 45.455 0.00 8.61 35.30 4.85
83 84 3.118542 GCTGTGCTGAAAGTTTTTCCTG 58.881 45.455 0.00 0.00 35.30 3.86
84 85 2.760092 TGCTGTGCTGAAAGTTTTTCCT 59.240 40.909 0.00 0.00 35.30 3.36
85 86 2.860136 GTGCTGTGCTGAAAGTTTTTCC 59.140 45.455 0.00 0.00 35.30 3.13
86 87 2.531508 CGTGCTGTGCTGAAAGTTTTTC 59.468 45.455 0.00 0.00 35.30 2.29
87 88 2.094752 ACGTGCTGTGCTGAAAGTTTTT 60.095 40.909 0.00 0.00 35.30 1.94
88 89 1.472480 ACGTGCTGTGCTGAAAGTTTT 59.528 42.857 0.00 0.00 35.30 2.43
89 90 1.094785 ACGTGCTGTGCTGAAAGTTT 58.905 45.000 0.00 0.00 35.30 2.66
90 91 1.597663 GTACGTGCTGTGCTGAAAGTT 59.402 47.619 0.00 0.00 35.30 2.66
91 92 1.217882 GTACGTGCTGTGCTGAAAGT 58.782 50.000 0.00 0.00 35.30 2.66
92 93 1.217001 TGTACGTGCTGTGCTGAAAG 58.783 50.000 4.97 0.00 33.83 2.62
93 94 1.798223 GATGTACGTGCTGTGCTGAAA 59.202 47.619 4.97 0.00 33.83 2.69
94 95 1.428448 GATGTACGTGCTGTGCTGAA 58.572 50.000 4.97 0.00 33.83 3.02
95 96 0.389817 GGATGTACGTGCTGTGCTGA 60.390 55.000 4.97 0.00 33.83 4.26
96 97 1.686566 CGGATGTACGTGCTGTGCTG 61.687 60.000 4.97 0.00 33.83 4.41
97 98 1.446099 CGGATGTACGTGCTGTGCT 60.446 57.895 4.97 0.00 33.83 4.40
98 99 1.736645 ACGGATGTACGTGCTGTGC 60.737 57.895 4.97 0.00 46.64 4.57
99 100 4.571250 ACGGATGTACGTGCTGTG 57.429 55.556 4.97 0.00 46.64 3.66
106 107 1.585521 GTCGCTGGACGGATGTACG 60.586 63.158 0.00 0.00 43.89 3.67
107 108 0.108992 TTGTCGCTGGACGGATGTAC 60.109 55.000 0.00 0.00 46.49 2.90
108 109 0.821517 ATTGTCGCTGGACGGATGTA 59.178 50.000 0.00 0.00 46.49 2.29
109 110 0.740868 CATTGTCGCTGGACGGATGT 60.741 55.000 0.00 0.00 46.49 3.06
110 111 0.740868 ACATTGTCGCTGGACGGATG 60.741 55.000 8.11 8.11 46.49 3.51
111 112 0.821517 TACATTGTCGCTGGACGGAT 59.178 50.000 0.00 0.00 46.49 4.18
112 113 0.821517 ATACATTGTCGCTGGACGGA 59.178 50.000 0.00 0.00 46.49 4.69
113 114 2.124903 GTATACATTGTCGCTGGACGG 58.875 52.381 0.00 0.00 46.49 4.79
114 115 3.079960 AGTATACATTGTCGCTGGACG 57.920 47.619 5.50 0.00 46.49 4.79
115 116 5.796350 AAAAGTATACATTGTCGCTGGAC 57.204 39.130 5.50 0.00 43.71 4.02
116 117 6.636705 AGTAAAAGTATACATTGTCGCTGGA 58.363 36.000 5.50 0.00 0.00 3.86
117 118 6.533723 TGAGTAAAAGTATACATTGTCGCTGG 59.466 38.462 5.50 0.00 0.00 4.85
118 119 7.391786 GTGAGTAAAAGTATACATTGTCGCTG 58.608 38.462 5.50 0.00 0.00 5.18
119 120 6.252869 CGTGAGTAAAAGTATACATTGTCGCT 59.747 38.462 5.50 0.00 0.00 4.93
120 121 6.252015 TCGTGAGTAAAAGTATACATTGTCGC 59.748 38.462 5.50 4.15 0.00 5.19
121 122 7.730067 TCGTGAGTAAAAGTATACATTGTCG 57.270 36.000 5.50 0.80 0.00 4.35
130 131 8.122952 GCTGCAATAATTCGTGAGTAAAAGTAT 58.877 33.333 0.00 0.00 0.00 2.12
131 132 7.461107 GCTGCAATAATTCGTGAGTAAAAGTA 58.539 34.615 0.00 0.00 0.00 2.24
132 133 6.314784 GCTGCAATAATTCGTGAGTAAAAGT 58.685 36.000 0.00 0.00 0.00 2.66
133 134 5.449113 CGCTGCAATAATTCGTGAGTAAAAG 59.551 40.000 0.00 0.00 0.00 2.27
134 135 5.106869 ACGCTGCAATAATTCGTGAGTAAAA 60.107 36.000 0.00 0.00 31.74 1.52
135 136 4.390603 ACGCTGCAATAATTCGTGAGTAAA 59.609 37.500 0.00 0.00 31.74 2.01
136 137 3.930229 ACGCTGCAATAATTCGTGAGTAA 59.070 39.130 0.00 0.00 31.74 2.24
137 138 3.517602 ACGCTGCAATAATTCGTGAGTA 58.482 40.909 0.00 0.00 31.74 2.59
138 139 2.346803 ACGCTGCAATAATTCGTGAGT 58.653 42.857 0.00 0.00 31.74 3.41
139 140 3.602491 GCTACGCTGCAATAATTCGTGAG 60.602 47.826 0.00 0.00 34.97 3.51
140 141 2.284150 GCTACGCTGCAATAATTCGTGA 59.716 45.455 0.00 0.00 34.97 4.35
141 142 2.599848 GGCTACGCTGCAATAATTCGTG 60.600 50.000 0.00 0.00 34.97 4.35
142 143 1.597663 GGCTACGCTGCAATAATTCGT 59.402 47.619 0.00 0.00 37.19 3.85
143 144 1.069906 GGGCTACGCTGCAATAATTCG 60.070 52.381 0.00 0.00 34.04 3.34
144 145 1.069906 CGGGCTACGCTGCAATAATTC 60.070 52.381 0.00 0.00 34.82 2.17
145 146 0.944386 CGGGCTACGCTGCAATAATT 59.056 50.000 0.00 0.00 34.82 1.40
146 147 2.616969 CGGGCTACGCTGCAATAAT 58.383 52.632 0.00 0.00 34.82 1.28
147 148 4.118480 CGGGCTACGCTGCAATAA 57.882 55.556 0.00 0.00 34.82 1.40
163 164 4.498520 ATGGTCGACTCGCCAGCG 62.499 66.667 16.46 5.50 36.77 5.18
164 165 2.583593 GATGGTCGACTCGCCAGC 60.584 66.667 16.46 14.35 36.77 4.85
165 166 2.278206 CGATGGTCGACTCGCCAG 60.278 66.667 16.46 0.00 43.74 4.85
166 167 2.748647 TCGATGGTCGACTCGCCA 60.749 61.111 19.14 14.37 44.82 5.69
167 168 2.024871 CTCGATGGTCGACTCGCC 59.975 66.667 19.14 2.73 44.82 5.54
168 169 2.652496 GCTCGATGGTCGACTCGC 60.652 66.667 19.14 5.82 44.82 5.03
169 170 1.297967 CAGCTCGATGGTCGACTCG 60.298 63.158 18.17 18.17 44.82 4.18
170 171 1.587613 GCAGCTCGATGGTCGACTC 60.588 63.158 16.46 5.06 44.82 3.36
171 172 1.999071 GAGCAGCTCGATGGTCGACT 61.999 60.000 16.46 0.00 44.82 4.18
172 173 1.587613 GAGCAGCTCGATGGTCGAC 60.588 63.158 6.67 7.13 44.82 4.20
175 176 4.728058 GAGAGCAGCTCGATGGTC 57.272 61.111 16.99 9.64 45.83 4.02
182 183 5.520376 AGAAAGAGAATAGAGAGCAGCTC 57.480 43.478 15.25 15.25 44.29 4.09
183 184 5.937975 AAGAAAGAGAATAGAGAGCAGCT 57.062 39.130 0.00 0.00 0.00 4.24
184 185 5.231991 CGAAAGAAAGAGAATAGAGAGCAGC 59.768 44.000 0.00 0.00 0.00 5.25
185 186 5.231991 GCGAAAGAAAGAGAATAGAGAGCAG 59.768 44.000 0.00 0.00 0.00 4.24
186 187 5.105752 GCGAAAGAAAGAGAATAGAGAGCA 58.894 41.667 0.00 0.00 0.00 4.26
187 188 4.506288 GGCGAAAGAAAGAGAATAGAGAGC 59.494 45.833 0.00 0.00 0.00 4.09
188 189 5.901552 AGGCGAAAGAAAGAGAATAGAGAG 58.098 41.667 0.00 0.00 0.00 3.20
189 190 5.449314 CGAGGCGAAAGAAAGAGAATAGAGA 60.449 44.000 0.00 0.00 0.00 3.10
190 191 4.737765 CGAGGCGAAAGAAAGAGAATAGAG 59.262 45.833 0.00 0.00 0.00 2.43
191 192 4.398358 TCGAGGCGAAAGAAAGAGAATAGA 59.602 41.667 0.00 0.00 31.06 1.98
192 193 4.673441 TCGAGGCGAAAGAAAGAGAATAG 58.327 43.478 0.00 0.00 31.06 1.73
193 194 4.713824 TCGAGGCGAAAGAAAGAGAATA 57.286 40.909 0.00 0.00 31.06 1.75
194 195 3.594603 TCGAGGCGAAAGAAAGAGAAT 57.405 42.857 0.00 0.00 31.06 2.40
195 196 3.380479 TTCGAGGCGAAAGAAAGAGAA 57.620 42.857 0.00 0.00 43.00 2.87
206 207 2.613691 GAACCAGTTTATTCGAGGCGA 58.386 47.619 0.00 0.00 0.00 5.54
212 213 3.422603 CGTTCACCGAACCAGTTTATTCG 60.423 47.826 1.47 0.00 45.68 3.34
213 214 3.742369 TCGTTCACCGAACCAGTTTATTC 59.258 43.478 1.47 0.00 44.03 1.75
214 215 3.731089 TCGTTCACCGAACCAGTTTATT 58.269 40.909 1.47 0.00 44.03 1.40
215 216 3.243975 ACTCGTTCACCGAACCAGTTTAT 60.244 43.478 1.88 0.00 46.75 1.40
216 217 2.101249 ACTCGTTCACCGAACCAGTTTA 59.899 45.455 1.88 0.00 46.75 2.01
217 218 1.134610 ACTCGTTCACCGAACCAGTTT 60.135 47.619 1.88 0.00 46.75 2.66
218 219 0.462789 ACTCGTTCACCGAACCAGTT 59.537 50.000 1.88 0.00 46.75 3.16
219 220 0.249322 CACTCGTTCACCGAACCAGT 60.249 55.000 1.88 1.88 46.75 4.00
220 221 0.031585 TCACTCGTTCACCGAACCAG 59.968 55.000 1.47 1.07 46.75 4.00
221 222 0.460722 TTCACTCGTTCACCGAACCA 59.539 50.000 1.47 0.00 46.75 3.67
222 223 1.525619 CTTTCACTCGTTCACCGAACC 59.474 52.381 1.47 0.00 46.75 3.62
223 224 2.466846 TCTTTCACTCGTTCACCGAAC 58.533 47.619 0.00 0.00 46.75 3.95
224 225 2.875087 TCTTTCACTCGTTCACCGAA 57.125 45.000 0.00 0.00 46.75 4.30
225 226 3.057019 CAATCTTTCACTCGTTCACCGA 58.943 45.455 0.00 0.00 45.00 4.69
226 227 2.800544 ACAATCTTTCACTCGTTCACCG 59.199 45.455 0.00 0.00 38.13 4.94
227 228 4.813296 AACAATCTTTCACTCGTTCACC 57.187 40.909 0.00 0.00 0.00 4.02
228 229 6.745450 TGAAAAACAATCTTTCACTCGTTCAC 59.255 34.615 0.00 0.00 37.76 3.18
229 230 6.847400 TGAAAAACAATCTTTCACTCGTTCA 58.153 32.000 0.00 0.00 37.76 3.18
230 231 7.253651 GGTTGAAAAACAATCTTTCACTCGTTC 60.254 37.037 0.00 0.00 41.32 3.95
231 232 6.530181 GGTTGAAAAACAATCTTTCACTCGTT 59.470 34.615 0.00 0.00 41.32 3.85
232 233 6.033966 GGTTGAAAAACAATCTTTCACTCGT 58.966 36.000 0.00 0.00 41.32 4.18
233 234 6.265577 AGGTTGAAAAACAATCTTTCACTCG 58.734 36.000 0.00 0.00 46.40 4.18
242 243 5.988561 TGCCATACAAGGTTGAAAAACAATC 59.011 36.000 0.00 0.00 40.76 2.67
243 244 5.923204 TGCCATACAAGGTTGAAAAACAAT 58.077 33.333 0.00 0.00 40.76 2.71
244 245 5.344743 TGCCATACAAGGTTGAAAAACAA 57.655 34.783 0.00 0.00 34.45 2.83
245 246 5.069648 TGATGCCATACAAGGTTGAAAAACA 59.930 36.000 0.00 0.00 34.45 2.83
246 247 5.537188 TGATGCCATACAAGGTTGAAAAAC 58.463 37.500 0.00 0.00 0.00 2.43
247 248 5.279406 CCTGATGCCATACAAGGTTGAAAAA 60.279 40.000 0.00 0.00 0.00 1.94
248 249 4.220382 CCTGATGCCATACAAGGTTGAAAA 59.780 41.667 0.00 0.00 0.00 2.29
249 250 3.763360 CCTGATGCCATACAAGGTTGAAA 59.237 43.478 0.00 0.00 0.00 2.69
250 251 3.355378 CCTGATGCCATACAAGGTTGAA 58.645 45.455 0.00 0.00 0.00 2.69
251 252 2.357050 CCCTGATGCCATACAAGGTTGA 60.357 50.000 0.00 0.00 0.00 3.18
252 253 2.026641 CCCTGATGCCATACAAGGTTG 58.973 52.381 1.23 0.00 0.00 3.77
253 254 1.063717 CCCCTGATGCCATACAAGGTT 60.064 52.381 1.23 0.00 0.00 3.50
254 255 0.552848 CCCCTGATGCCATACAAGGT 59.447 55.000 1.23 0.00 0.00 3.50
255 256 0.552848 ACCCCTGATGCCATACAAGG 59.447 55.000 0.00 0.00 0.00 3.61
256 257 2.705658 TCTACCCCTGATGCCATACAAG 59.294 50.000 0.00 0.00 0.00 3.16
257 258 2.770447 TCTACCCCTGATGCCATACAA 58.230 47.619 0.00 0.00 0.00 2.41
258 259 2.487746 TCTACCCCTGATGCCATACA 57.512 50.000 0.00 0.00 0.00 2.29
259 260 3.560025 CCATTCTACCCCTGATGCCATAC 60.560 52.174 0.00 0.00 0.00 2.39
260 261 2.644299 CCATTCTACCCCTGATGCCATA 59.356 50.000 0.00 0.00 0.00 2.74
261 262 1.426598 CCATTCTACCCCTGATGCCAT 59.573 52.381 0.00 0.00 0.00 4.40
262 263 0.846015 CCATTCTACCCCTGATGCCA 59.154 55.000 0.00 0.00 0.00 4.92
263 264 0.846693 ACCATTCTACCCCTGATGCC 59.153 55.000 0.00 0.00 0.00 4.40
264 265 1.771255 AGACCATTCTACCCCTGATGC 59.229 52.381 0.00 0.00 0.00 3.91
265 266 4.510167 AAAGACCATTCTACCCCTGATG 57.490 45.455 0.00 0.00 0.00 3.07
266 267 4.540099 TGAAAAGACCATTCTACCCCTGAT 59.460 41.667 0.00 0.00 0.00 2.90
267 268 3.913799 TGAAAAGACCATTCTACCCCTGA 59.086 43.478 0.00 0.00 0.00 3.86
268 269 4.301072 TGAAAAGACCATTCTACCCCTG 57.699 45.455 0.00 0.00 0.00 4.45
269 270 4.292306 ACATGAAAAGACCATTCTACCCCT 59.708 41.667 0.00 0.00 0.00 4.79
270 271 4.600062 ACATGAAAAGACCATTCTACCCC 58.400 43.478 0.00 0.00 0.00 4.95
271 272 5.622233 GCAACATGAAAAGACCATTCTACCC 60.622 44.000 0.00 0.00 0.00 3.69
272 273 5.048083 TGCAACATGAAAAGACCATTCTACC 60.048 40.000 0.00 0.00 0.00 3.18
273 274 6.012658 TGCAACATGAAAAGACCATTCTAC 57.987 37.500 0.00 0.00 0.00 2.59
274 275 6.839124 ATGCAACATGAAAAGACCATTCTA 57.161 33.333 0.00 0.00 0.00 2.10
275 276 5.733620 ATGCAACATGAAAAGACCATTCT 57.266 34.783 0.00 0.00 0.00 2.40
276 277 6.790285 AAATGCAACATGAAAAGACCATTC 57.210 33.333 0.00 0.00 0.00 2.67
277 278 7.714377 TGTTAAATGCAACATGAAAAGACCATT 59.286 29.630 0.00 0.00 33.55 3.16
278 279 7.171337 GTGTTAAATGCAACATGAAAAGACCAT 59.829 33.333 0.00 0.00 40.36 3.55
279 280 6.478344 GTGTTAAATGCAACATGAAAAGACCA 59.522 34.615 0.00 0.00 40.36 4.02
280 281 6.701400 AGTGTTAAATGCAACATGAAAAGACC 59.299 34.615 0.00 0.00 40.36 3.85
281 282 7.222611 ACAGTGTTAAATGCAACATGAAAAGAC 59.777 33.333 0.00 0.00 40.36 3.01
282 283 7.264221 ACAGTGTTAAATGCAACATGAAAAGA 58.736 30.769 0.00 0.00 40.36 2.52
283 284 7.467557 ACAGTGTTAAATGCAACATGAAAAG 57.532 32.000 0.00 0.00 40.36 2.27
284 285 7.840342 AACAGTGTTAAATGCAACATGAAAA 57.160 28.000 6.75 0.00 40.36 2.29
285 286 7.332926 ACAAACAGTGTTAAATGCAACATGAAA 59.667 29.630 9.37 0.00 40.36 2.69
286 287 6.815641 ACAAACAGTGTTAAATGCAACATGAA 59.184 30.769 9.37 0.00 40.36 2.57
287 288 6.255237 CACAAACAGTGTTAAATGCAACATGA 59.745 34.615 9.37 0.00 43.40 3.07
288 289 6.412460 CACAAACAGTGTTAAATGCAACATG 58.588 36.000 9.37 2.28 43.40 3.21
289 290 6.586868 CACAAACAGTGTTAAATGCAACAT 57.413 33.333 9.37 0.00 43.40 2.71
307 308 5.584649 CACTTCTGTCTAGTTTGACCACAAA 59.415 40.000 0.00 0.00 42.66 2.83
308 309 5.116180 CACTTCTGTCTAGTTTGACCACAA 58.884 41.667 0.00 0.00 36.21 3.33
309 310 4.161565 ACACTTCTGTCTAGTTTGACCACA 59.838 41.667 0.00 0.00 36.21 4.17
310 311 4.694339 ACACTTCTGTCTAGTTTGACCAC 58.306 43.478 0.00 0.00 36.21 4.16
311 312 4.404394 TGACACTTCTGTCTAGTTTGACCA 59.596 41.667 2.72 0.00 46.31 4.02
312 313 4.745620 GTGACACTTCTGTCTAGTTTGACC 59.254 45.833 0.00 0.00 46.31 4.02
313 314 5.348986 TGTGACACTTCTGTCTAGTTTGAC 58.651 41.667 7.20 0.00 46.31 3.18
314 315 5.592104 TGTGACACTTCTGTCTAGTTTGA 57.408 39.130 7.20 0.00 46.31 2.69
315 316 6.587990 CCTATGTGACACTTCTGTCTAGTTTG 59.412 42.308 7.20 0.00 46.31 2.93
316 317 6.295349 CCCTATGTGACACTTCTGTCTAGTTT 60.295 42.308 7.20 0.00 46.31 2.66
317 318 5.186021 CCCTATGTGACACTTCTGTCTAGTT 59.814 44.000 7.20 0.00 46.31 2.24
318 319 4.707448 CCCTATGTGACACTTCTGTCTAGT 59.293 45.833 7.20 0.00 46.31 2.57
319 320 4.950475 TCCCTATGTGACACTTCTGTCTAG 59.050 45.833 7.20 0.00 46.31 2.43
320 321 4.930696 TCCCTATGTGACACTTCTGTCTA 58.069 43.478 7.20 0.00 46.31 2.59
321 322 3.779444 TCCCTATGTGACACTTCTGTCT 58.221 45.455 7.20 0.00 46.31 3.41
322 323 4.246458 GTTCCCTATGTGACACTTCTGTC 58.754 47.826 7.20 0.00 46.34 3.51
323 324 3.646162 TGTTCCCTATGTGACACTTCTGT 59.354 43.478 7.20 0.00 0.00 3.41
324 325 4.271696 TGTTCCCTATGTGACACTTCTG 57.728 45.455 7.20 0.00 0.00 3.02
325 326 4.974645 TTGTTCCCTATGTGACACTTCT 57.025 40.909 7.20 0.00 0.00 2.85
326 327 6.575162 AATTTGTTCCCTATGTGACACTTC 57.425 37.500 7.20 0.00 0.00 3.01
327 328 6.976934 AAATTTGTTCCCTATGTGACACTT 57.023 33.333 7.20 3.00 0.00 3.16
328 329 6.976934 AAAATTTGTTCCCTATGTGACACT 57.023 33.333 7.20 0.00 0.00 3.55
329 330 7.653647 TGTAAAATTTGTTCCCTATGTGACAC 58.346 34.615 0.00 0.00 0.00 3.67
330 331 7.825331 TGTAAAATTTGTTCCCTATGTGACA 57.175 32.000 0.00 0.00 0.00 3.58
331 332 9.705290 AAATGTAAAATTTGTTCCCTATGTGAC 57.295 29.630 0.00 0.00 0.00 3.67
332 333 9.703892 CAAATGTAAAATTTGTTCCCTATGTGA 57.296 29.630 0.00 0.00 35.07 3.58
333 334 8.934825 CCAAATGTAAAATTTGTTCCCTATGTG 58.065 33.333 9.30 0.00 37.32 3.21
334 335 8.100164 CCCAAATGTAAAATTTGTTCCCTATGT 58.900 33.333 9.30 0.00 37.32 2.29
335 336 7.552330 CCCCAAATGTAAAATTTGTTCCCTATG 59.448 37.037 9.30 0.00 37.32 2.23
336 337 7.238723 ACCCCAAATGTAAAATTTGTTCCCTAT 59.761 33.333 9.30 0.00 37.32 2.57
337 338 6.559157 ACCCCAAATGTAAAATTTGTTCCCTA 59.441 34.615 9.30 0.00 37.32 3.53
338 339 5.371176 ACCCCAAATGTAAAATTTGTTCCCT 59.629 36.000 9.30 0.00 37.32 4.20
339 340 5.626142 ACCCCAAATGTAAAATTTGTTCCC 58.374 37.500 9.30 0.00 37.32 3.97
340 341 6.292150 TGACCCCAAATGTAAAATTTGTTCC 58.708 36.000 9.30 0.00 37.32 3.62
341 342 7.793927 TTGACCCCAAATGTAAAATTTGTTC 57.206 32.000 9.30 4.57 37.32 3.18
355 356 4.750833 TTCTTCCCTATTTGACCCCAAA 57.249 40.909 0.00 0.00 45.28 3.28
356 357 4.750833 TTTCTTCCCTATTTGACCCCAA 57.249 40.909 0.00 0.00 0.00 4.12
357 358 4.750833 TTTTCTTCCCTATTTGACCCCA 57.249 40.909 0.00 0.00 0.00 4.96
358 359 5.084519 AGTTTTTCTTCCCTATTTGACCCC 58.915 41.667 0.00 0.00 0.00 4.95
359 360 6.665992 AAGTTTTTCTTCCCTATTTGACCC 57.334 37.500 0.00 0.00 0.00 4.46
360 361 8.958119 AAAAAGTTTTTCTTCCCTATTTGACC 57.042 30.769 7.79 0.00 35.02 4.02
382 383 3.392616 TGCTTCCTTATTTGGCCCAAAAA 59.607 39.130 13.87 8.10 36.90 1.94
383 384 2.975489 TGCTTCCTTATTTGGCCCAAAA 59.025 40.909 13.87 0.00 36.90 2.44
384 385 2.614259 TGCTTCCTTATTTGGCCCAAA 58.386 42.857 12.07 12.07 37.75 3.28
385 386 2.317371 TGCTTCCTTATTTGGCCCAA 57.683 45.000 0.00 0.00 0.00 4.12
386 387 2.301583 GTTTGCTTCCTTATTTGGCCCA 59.698 45.455 0.00 0.00 0.00 5.36
387 388 2.567169 AGTTTGCTTCCTTATTTGGCCC 59.433 45.455 0.00 0.00 0.00 5.80
388 389 3.961480 AGTTTGCTTCCTTATTTGGCC 57.039 42.857 0.00 0.00 0.00 5.36
389 390 7.151976 TCTTAAAGTTTGCTTCCTTATTTGGC 58.848 34.615 0.00 0.00 33.01 4.52
390 391 9.541143 TTTCTTAAAGTTTGCTTCCTTATTTGG 57.459 29.630 0.00 0.00 33.01 3.28
392 393 9.764363 CCTTTCTTAAAGTTTGCTTCCTTATTT 57.236 29.630 0.00 0.00 36.77 1.40
393 394 8.367911 CCCTTTCTTAAAGTTTGCTTCCTTATT 58.632 33.333 0.00 0.00 36.77 1.40
394 395 7.525526 GCCCTTTCTTAAAGTTTGCTTCCTTAT 60.526 37.037 0.00 0.00 36.77 1.73
395 396 6.239204 GCCCTTTCTTAAAGTTTGCTTCCTTA 60.239 38.462 0.00 0.00 36.77 2.69
396 397 5.453339 GCCCTTTCTTAAAGTTTGCTTCCTT 60.453 40.000 0.00 0.00 36.77 3.36
397 398 4.039245 GCCCTTTCTTAAAGTTTGCTTCCT 59.961 41.667 0.00 0.00 36.77 3.36
398 399 4.307432 GCCCTTTCTTAAAGTTTGCTTCC 58.693 43.478 0.00 0.00 36.77 3.46
399 400 4.202212 TGGCCCTTTCTTAAAGTTTGCTTC 60.202 41.667 0.00 0.00 36.77 3.86
400 401 3.709141 TGGCCCTTTCTTAAAGTTTGCTT 59.291 39.130 0.00 0.00 36.77 3.91
401 402 3.304829 TGGCCCTTTCTTAAAGTTTGCT 58.695 40.909 0.00 0.00 36.77 3.91
402 403 3.744238 TGGCCCTTTCTTAAAGTTTGC 57.256 42.857 0.00 0.00 36.77 3.68
403 404 7.387673 CCTTATTTGGCCCTTTCTTAAAGTTTG 59.612 37.037 0.00 0.00 36.77 2.93
404 405 7.291416 TCCTTATTTGGCCCTTTCTTAAAGTTT 59.709 33.333 0.00 0.00 36.77 2.66
405 406 6.785466 TCCTTATTTGGCCCTTTCTTAAAGTT 59.215 34.615 0.00 0.00 36.77 2.66
406 407 6.319715 TCCTTATTTGGCCCTTTCTTAAAGT 58.680 36.000 0.00 0.00 36.77 2.66
407 408 6.850752 TCCTTATTTGGCCCTTTCTTAAAG 57.149 37.500 0.00 0.00 38.24 1.85
408 409 7.806680 ATTCCTTATTTGGCCCTTTCTTAAA 57.193 32.000 0.00 0.00 0.00 1.52
409 410 7.678171 AGAATTCCTTATTTGGCCCTTTCTTAA 59.322 33.333 0.00 0.00 0.00 1.85
410 411 7.189087 AGAATTCCTTATTTGGCCCTTTCTTA 58.811 34.615 0.00 0.00 0.00 2.10
411 412 6.025539 AGAATTCCTTATTTGGCCCTTTCTT 58.974 36.000 0.00 0.00 0.00 2.52
412 413 5.593786 AGAATTCCTTATTTGGCCCTTTCT 58.406 37.500 0.00 0.00 0.00 2.52
413 414 5.658634 AGAGAATTCCTTATTTGGCCCTTTC 59.341 40.000 0.00 0.00 0.00 2.62
414 415 5.593786 AGAGAATTCCTTATTTGGCCCTTT 58.406 37.500 0.00 0.00 0.00 3.11
415 416 5.043806 AGAGAGAATTCCTTATTTGGCCCTT 60.044 40.000 0.00 0.00 0.00 3.95
416 417 4.480166 AGAGAGAATTCCTTATTTGGCCCT 59.520 41.667 0.00 0.00 0.00 5.19
417 418 4.797743 AGAGAGAATTCCTTATTTGGCCC 58.202 43.478 0.00 0.00 0.00 5.80
418 419 6.000840 CCTAGAGAGAATTCCTTATTTGGCC 58.999 44.000 0.65 0.00 0.00 5.36
419 420 6.000840 CCCTAGAGAGAATTCCTTATTTGGC 58.999 44.000 0.65 0.00 0.00 4.52
420 421 7.142995 ACCCTAGAGAGAATTCCTTATTTGG 57.857 40.000 0.65 0.00 0.00 3.28
421 422 9.717942 CATACCCTAGAGAGAATTCCTTATTTG 57.282 37.037 0.65 0.00 0.00 2.32
422 423 9.453830 ACATACCCTAGAGAGAATTCCTTATTT 57.546 33.333 0.65 0.00 0.00 1.40
423 424 8.875168 CACATACCCTAGAGAGAATTCCTTATT 58.125 37.037 0.65 0.00 0.00 1.40
424 425 8.013667 ACACATACCCTAGAGAGAATTCCTTAT 58.986 37.037 0.65 0.00 0.00 1.73
425 426 7.287927 CACACATACCCTAGAGAGAATTCCTTA 59.712 40.741 0.65 0.00 0.00 2.69
426 427 6.098982 CACACATACCCTAGAGAGAATTCCTT 59.901 42.308 0.65 0.00 0.00 3.36
427 428 5.600484 CACACATACCCTAGAGAGAATTCCT 59.400 44.000 0.65 0.00 0.00 3.36
428 429 5.364157 ACACACATACCCTAGAGAGAATTCC 59.636 44.000 0.65 0.00 0.00 3.01
429 430 6.127310 ACACACACATACCCTAGAGAGAATTC 60.127 42.308 0.00 0.00 0.00 2.17
430 431 5.721960 ACACACACATACCCTAGAGAGAATT 59.278 40.000 0.00 0.00 0.00 2.17
431 432 5.127845 CACACACACATACCCTAGAGAGAAT 59.872 44.000 0.00 0.00 0.00 2.40
432 433 4.462834 CACACACACATACCCTAGAGAGAA 59.537 45.833 0.00 0.00 0.00 2.87
433 434 4.017126 CACACACACATACCCTAGAGAGA 58.983 47.826 0.00 0.00 0.00 3.10
434 435 3.429547 GCACACACACATACCCTAGAGAG 60.430 52.174 0.00 0.00 0.00 3.20
435 436 2.496070 GCACACACACATACCCTAGAGA 59.504 50.000 0.00 0.00 0.00 3.10
436 437 2.497675 AGCACACACACATACCCTAGAG 59.502 50.000 0.00 0.00 0.00 2.43
437 438 2.496070 GAGCACACACACATACCCTAGA 59.504 50.000 0.00 0.00 0.00 2.43
438 439 2.233676 TGAGCACACACACATACCCTAG 59.766 50.000 0.00 0.00 0.00 3.02
439 440 2.252714 TGAGCACACACACATACCCTA 58.747 47.619 0.00 0.00 0.00 3.53
440 441 1.055849 TGAGCACACACACATACCCT 58.944 50.000 0.00 0.00 0.00 4.34
441 442 2.113860 ATGAGCACACACACATACCC 57.886 50.000 0.00 0.00 0.00 3.69
442 443 4.123497 TCTATGAGCACACACACATACC 57.877 45.455 0.00 0.00 0.00 2.73
443 444 5.062683 CACTTCTATGAGCACACACACATAC 59.937 44.000 0.00 0.00 0.00 2.39
444 445 5.047377 TCACTTCTATGAGCACACACACATA 60.047 40.000 0.00 0.00 0.00 2.29
445 446 3.999001 CACTTCTATGAGCACACACACAT 59.001 43.478 0.00 0.00 0.00 3.21
446 447 3.069443 TCACTTCTATGAGCACACACACA 59.931 43.478 0.00 0.00 0.00 3.72
447 448 3.653344 TCACTTCTATGAGCACACACAC 58.347 45.455 0.00 0.00 0.00 3.82
448 449 3.917988 CTCACTTCTATGAGCACACACA 58.082 45.455 0.00 0.00 39.77 3.72
457 458 6.373495 ACACGTACATACACTCACTTCTATGA 59.627 38.462 0.00 0.00 0.00 2.15
458 459 6.552629 ACACGTACATACACTCACTTCTATG 58.447 40.000 0.00 0.00 0.00 2.23
459 460 6.754702 ACACGTACATACACTCACTTCTAT 57.245 37.500 0.00 0.00 0.00 1.98
460 461 7.335171 ACATACACGTACATACACTCACTTCTA 59.665 37.037 0.00 0.00 0.00 2.10
461 462 6.150641 ACATACACGTACATACACTCACTTCT 59.849 38.462 0.00 0.00 0.00 2.85
462 463 6.250739 CACATACACGTACATACACTCACTTC 59.749 42.308 0.00 0.00 0.00 3.01
463 464 6.090783 CACATACACGTACATACACTCACTT 58.909 40.000 0.00 0.00 0.00 3.16
464 465 5.182570 ACACATACACGTACATACACTCACT 59.817 40.000 0.00 0.00 0.00 3.41
465 466 5.285370 CACACATACACGTACATACACTCAC 59.715 44.000 0.00 0.00 0.00 3.51
466 467 5.181622 TCACACATACACGTACATACACTCA 59.818 40.000 0.00 0.00 0.00 3.41
467 468 5.633927 TCACACATACACGTACATACACTC 58.366 41.667 0.00 0.00 0.00 3.51
468 469 5.392703 CCTCACACATACACGTACATACACT 60.393 44.000 0.00 0.00 0.00 3.55
469 470 4.796830 CCTCACACATACACGTACATACAC 59.203 45.833 0.00 0.00 0.00 2.90
470 471 4.460034 ACCTCACACATACACGTACATACA 59.540 41.667 0.00 0.00 0.00 2.29
471 472 4.990257 ACCTCACACATACACGTACATAC 58.010 43.478 0.00 0.00 0.00 2.39
472 473 5.416639 AGAACCTCACACATACACGTACATA 59.583 40.000 0.00 0.00 0.00 2.29
473 474 4.219944 AGAACCTCACACATACACGTACAT 59.780 41.667 0.00 0.00 0.00 2.29
474 475 3.570975 AGAACCTCACACATACACGTACA 59.429 43.478 0.00 0.00 0.00 2.90
475 476 4.164294 GAGAACCTCACACATACACGTAC 58.836 47.826 0.00 0.00 0.00 3.67
476 477 3.192001 GGAGAACCTCACACATACACGTA 59.808 47.826 0.00 0.00 31.08 3.57
477 478 2.029290 GGAGAACCTCACACATACACGT 60.029 50.000 0.00 0.00 31.08 4.49
478 479 2.607187 GGAGAACCTCACACATACACG 58.393 52.381 0.00 0.00 31.08 4.49
479 480 2.029290 ACGGAGAACCTCACACATACAC 60.029 50.000 0.00 0.00 31.08 2.90
480 481 2.230508 GACGGAGAACCTCACACATACA 59.769 50.000 0.00 0.00 31.08 2.29
481 482 2.492484 AGACGGAGAACCTCACACATAC 59.508 50.000 0.00 0.00 31.08 2.39
482 483 2.492088 CAGACGGAGAACCTCACACATA 59.508 50.000 0.00 0.00 31.08 2.29
483 484 1.273606 CAGACGGAGAACCTCACACAT 59.726 52.381 0.00 0.00 31.08 3.21
484 485 0.673985 CAGACGGAGAACCTCACACA 59.326 55.000 0.00 0.00 31.08 3.72
485 486 0.674534 ACAGACGGAGAACCTCACAC 59.325 55.000 0.00 0.00 31.08 3.82
486 487 2.160205 CTACAGACGGAGAACCTCACA 58.840 52.381 0.00 0.00 31.08 3.58
487 488 2.161030 ACTACAGACGGAGAACCTCAC 58.839 52.381 0.00 0.00 31.08 3.51
488 489 2.581216 ACTACAGACGGAGAACCTCA 57.419 50.000 0.00 0.00 31.08 3.86
489 490 3.946558 ACATACTACAGACGGAGAACCTC 59.053 47.826 0.00 0.00 0.00 3.85
490 491 3.695060 CACATACTACAGACGGAGAACCT 59.305 47.826 0.00 0.00 0.00 3.50
491 492 3.442977 ACACATACTACAGACGGAGAACC 59.557 47.826 0.00 0.00 0.00 3.62
492 493 4.082895 ACACACATACTACAGACGGAGAAC 60.083 45.833 0.00 0.00 0.00 3.01
493 494 4.077108 ACACACATACTACAGACGGAGAA 58.923 43.478 0.00 0.00 0.00 2.87
494 495 3.682696 ACACACATACTACAGACGGAGA 58.317 45.455 0.00 0.00 0.00 3.71
495 496 4.436242 AACACACATACTACAGACGGAG 57.564 45.455 0.00 0.00 0.00 4.63
496 497 4.859304 AAACACACATACTACAGACGGA 57.141 40.909 0.00 0.00 0.00 4.69
497 498 5.917541 AAAAACACACATACTACAGACGG 57.082 39.130 0.00 0.00 0.00 4.79
603 604 3.019799 TCAACTTTGGGTGCTTACCAA 57.980 42.857 3.68 3.68 45.73 3.67
638 639 4.152402 GCCCTGTTATCACGCATATTAGTG 59.848 45.833 1.84 1.84 39.55 2.74
643 646 1.608025 CCGCCCTGTTATCACGCATAT 60.608 52.381 0.00 0.00 0.00 1.78
658 661 0.387929 TGATTAGATCGTGACCGCCC 59.612 55.000 0.00 0.00 0.00 6.13
667 670 7.408132 ACAAATATCGGTTGTGATTAGATCG 57.592 36.000 0.00 0.00 37.80 3.69
703 4468 7.770433 TGGTATTTCTTTCCATGTGTAGAGATG 59.230 37.037 0.00 0.00 0.00 2.90
738 4503 2.030540 GCATTATGATCACGCTTGCCAT 60.031 45.455 0.00 4.06 0.00 4.40
741 4506 1.334556 TGGCATTATGATCACGCTTGC 59.665 47.619 0.00 5.39 0.00 4.01
754 4519 5.852827 TGTGATTAGATCGTGATGGCATTA 58.147 37.500 0.00 0.00 0.00 1.90
798 4563 8.033038 GTGTATATTTCCTTGCGTGGAGATATA 58.967 37.037 16.88 16.88 41.35 0.86
849 4614 1.401761 TGGCGGGATTTGATTGATGG 58.598 50.000 0.00 0.00 0.00 3.51
922 4695 9.567848 AAAGTGTAATAGTTTGTGTTTTGACTG 57.432 29.630 0.00 0.00 30.80 3.51
938 4712 7.716799 AATGCCCTTTGATCAAAGTGTAATA 57.283 32.000 34.83 20.43 44.66 0.98
943 4717 3.998341 CCAAATGCCCTTTGATCAAAGTG 59.002 43.478 34.83 28.82 45.96 3.16
965 4739 6.309251 GCTAGGCGATGTATCACTTTCTATTC 59.691 42.308 0.00 0.00 0.00 1.75
1026 4800 1.473278 AGGAGAAGTACTAGTGCGTGC 59.527 52.381 5.39 0.12 0.00 5.34
1193 4989 7.360575 ACAGAATTTTTGACACGTATAGACC 57.639 36.000 0.00 0.00 0.00 3.85
1201 4997 4.481930 TGCCTACAGAATTTTTGACACG 57.518 40.909 0.00 0.00 0.00 4.49
1230 5026 1.827399 GAACCTCCTTGTCCGCCTCA 61.827 60.000 0.00 0.00 0.00 3.86
1307 5103 6.604735 AATTGAGTGAACAACAGTAGTCAC 57.395 37.500 3.88 3.88 32.50 3.67
1394 5190 0.322187 TGATGAGGACGAGGACACGA 60.322 55.000 0.00 0.00 37.03 4.35
1398 5194 1.002251 GACGATGATGAGGACGAGGAC 60.002 57.143 0.00 0.00 0.00 3.85
1416 5224 0.521735 GGTTTCATGGAAGCACGGAC 59.478 55.000 11.14 0.00 0.00 4.79
1749 5601 8.400947 CGTAGAGCTGTTGTAGGTTAGTAAATA 58.599 37.037 0.00 0.00 37.23 1.40
1776 5628 1.518056 AAGATGGTGTTGCCTGTGCG 61.518 55.000 0.00 0.00 41.78 5.34
1782 5634 1.187567 AGCCCAAAGATGGTGTTGCC 61.188 55.000 0.00 0.00 46.01 4.52
1893 5745 2.625314 CCTGATATCTTCTGGCTCGTCA 59.375 50.000 3.98 0.00 36.74 4.35
2086 5948 0.880278 GACACGTGCATATGGCCGAT 60.880 55.000 17.22 0.00 43.89 4.18
2147 6010 3.431233 CCCTGATTCATGATCGTTGATCG 59.569 47.826 0.00 0.00 41.51 3.69
2225 6088 7.919091 ACCGAAACAAAGAAGGAAGAAAATAAC 59.081 33.333 0.00 0.00 0.00 1.89
2243 6106 3.283684 CTGCCCGCAACCGAAACA 61.284 61.111 0.00 0.00 36.29 2.83
2248 6111 1.861542 TTGATTTCTGCCCGCAACCG 61.862 55.000 0.00 0.00 0.00 4.44
2249 6112 0.316841 TTTGATTTCTGCCCGCAACC 59.683 50.000 0.00 0.00 0.00 3.77
2250 6113 1.269517 TGTTTGATTTCTGCCCGCAAC 60.270 47.619 0.00 0.00 0.00 4.17
2359 6250 8.869897 CGAGACAAAGCTAATATACAAAGTGAA 58.130 33.333 0.00 0.00 0.00 3.18
2361 6252 8.407457 TCGAGACAAAGCTAATATACAAAGTG 57.593 34.615 0.00 0.00 0.00 3.16
2362 6253 8.251721 ACTCGAGACAAAGCTAATATACAAAGT 58.748 33.333 21.68 0.00 0.00 2.66
2363 6254 8.635877 ACTCGAGACAAAGCTAATATACAAAG 57.364 34.615 21.68 0.00 0.00 2.77
2364 6255 8.248253 TGACTCGAGACAAAGCTAATATACAAA 58.752 33.333 21.68 0.00 0.00 2.83
2365 6256 7.768240 TGACTCGAGACAAAGCTAATATACAA 58.232 34.615 21.68 0.00 0.00 2.41
2367 6258 8.630278 TTTGACTCGAGACAAAGCTAATATAC 57.370 34.615 30.20 0.00 35.47 1.47


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.