Multiple sequence alignment - TraesCS3B01G576100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G576100 chr3B 100.000 4933 0 0 3193 8125 806087060 806082128 0.000000e+00 9110.0
1 TraesCS3B01G576100 chr3B 100.000 2813 0 0 1 2813 806090252 806087440 0.000000e+00 5195.0
2 TraesCS3B01G576100 chr3B 91.567 2348 191 2 245 2591 700344089 700341748 0.000000e+00 3232.0
3 TraesCS3B01G576100 chr3B 81.633 490 72 9 7467 7938 513940728 513941217 2.750000e-104 390.0
4 TraesCS3B01G576100 chr3B 94.215 242 14 0 1 242 618981696 618981937 3.580000e-98 370.0
5 TraesCS3B01G576100 chr3B 93.200 250 12 2 1 245 337013480 337013231 5.990000e-96 363.0
6 TraesCS3B01G576100 chr3B 93.469 245 10 1 1 245 535194813 535194575 7.750000e-95 359.0
7 TraesCS3B01G576100 chr3B 80.405 148 29 0 1027 1174 793513742 793513595 6.660000e-21 113.0
8 TraesCS3B01G576100 chr3B 90.141 71 5 2 3930 4000 450376655 450376587 3.120000e-14 91.6
9 TraesCS3B01G576100 chr3B 90.000 70 6 1 3932 4000 748777077 748777146 1.120000e-13 89.8
10 TraesCS3B01G576100 chr2D 95.443 2348 92 8 245 2591 595424058 595426391 0.000000e+00 3729.0
11 TraesCS3B01G576100 chr2D 88.211 492 39 10 3201 3687 104590518 104590995 3.290000e-158 569.0
12 TraesCS3B01G576100 chr2D 89.189 185 17 3 4032 4216 104591444 104591625 2.280000e-55 228.0
13 TraesCS3B01G576100 chr2D 86.131 137 18 1 7526 7661 533088386 533088522 6.570000e-31 147.0
14 TraesCS3B01G576100 chr2D 95.349 86 2 2 5454 5537 382442501 382442416 1.420000e-27 135.0
15 TraesCS3B01G576100 chr2D 96.296 81 2 1 5453 5532 382442421 382442501 1.840000e-26 132.0
16 TraesCS3B01G576100 chr6B 91.393 2347 192 5 245 2590 712990380 712992717 0.000000e+00 3206.0
17 TraesCS3B01G576100 chr6B 87.195 492 56 4 3201 3687 695593718 695594207 3.310000e-153 553.0
18 TraesCS3B01G576100 chr6B 95.294 85 4 0 5454 5538 717078929 717078845 1.420000e-27 135.0
19 TraesCS3B01G576100 chr6B 89.855 69 6 1 3932 4000 646750155 646750088 4.040000e-13 87.9
20 TraesCS3B01G576100 chr6B 89.855 69 6 1 3932 4000 646750265 646750198 4.040000e-13 87.9
21 TraesCS3B01G576100 chr3D 95.255 1433 48 3 245 1676 564490691 564492104 0.000000e+00 2252.0
22 TraesCS3B01G576100 chr3D 92.323 1550 92 16 5528 7056 598887940 598886397 0.000000e+00 2178.0
23 TraesCS3B01G576100 chr3D 96.158 833 25 2 1757 2588 564492104 564492930 0.000000e+00 1354.0
24 TraesCS3B01G576100 chr3D 83.444 1057 92 30 7085 8087 598886328 598885301 0.000000e+00 905.0
25 TraesCS3B01G576100 chr3D 87.702 805 62 18 4067 4869 598889615 598888846 0.000000e+00 904.0
26 TraesCS3B01G576100 chr3D 95.298 553 24 1 4906 5456 598888486 598887934 0.000000e+00 876.0
27 TraesCS3B01G576100 chr3D 87.739 783 48 24 3195 3948 598890730 598889967 0.000000e+00 870.0
28 TraesCS3B01G576100 chr3D 87.097 217 10 7 2611 2813 598891065 598890853 6.340000e-56 230.0
29 TraesCS3B01G576100 chr3D 89.024 82 6 3 3945 4026 67062532 67062454 1.870000e-16 99.0
30 TraesCS3B01G576100 chr3A 91.341 1663 112 24 5531 7170 728992506 728990853 0.000000e+00 2244.0
31 TraesCS3B01G576100 chr3A 91.469 1430 83 21 4032 5455 728993901 728992505 0.000000e+00 1929.0
32 TraesCS3B01G576100 chr3A 88.295 786 46 15 3195 3948 728994724 728993953 0.000000e+00 900.0
33 TraesCS3B01G576100 chr3A 90.021 471 40 4 3222 3687 569879187 569878719 3.240000e-168 603.0
34 TraesCS3B01G576100 chr3A 88.960 471 45 4 3222 3687 376083203 376082735 7.070000e-160 575.0
35 TraesCS3B01G576100 chr3A 89.189 185 17 3 4032 4216 376082290 376082109 2.280000e-55 228.0
36 TraesCS3B01G576100 chr3A 89.189 185 17 3 4032 4216 569878275 569878094 2.280000e-55 228.0
37 TraesCS3B01G576100 chr3A 94.574 129 4 2 2682 2809 728994970 728994844 6.430000e-46 196.0
38 TraesCS3B01G576100 chr7B 89.932 1629 163 1 245 1872 196015278 196013650 0.000000e+00 2098.0
39 TraesCS3B01G576100 chr7B 91.598 726 54 4 1869 2594 196005086 196004368 0.000000e+00 996.0
40 TraesCS3B01G576100 chr7B 94.286 245 7 2 1 245 127817940 127817703 1.290000e-97 368.0
41 TraesCS3B01G576100 chr7B 74.393 535 116 20 651 1174 644207994 644208518 8.260000e-50 209.0
42 TraesCS3B01G576100 chr7A 77.027 2368 497 35 248 2591 734913292 734910948 0.000000e+00 1315.0
43 TraesCS3B01G576100 chr7A 88.795 473 39 7 3224 3687 14525603 14525136 1.180000e-157 568.0
44 TraesCS3B01G576100 chr5B 76.027 2190 483 36 248 2420 401138485 401136321 0.000000e+00 1098.0
45 TraesCS3B01G576100 chr5B 87.903 496 46 10 3201 3687 41801540 41801050 9.150000e-159 571.0
46 TraesCS3B01G576100 chr5B 81.670 551 78 13 7467 7996 532317184 532316636 3.480000e-118 436.0
47 TraesCS3B01G576100 chr5B 94.715 246 9 1 1 242 267531540 267531785 5.950000e-101 379.0
48 TraesCS3B01G576100 chr5B 94.239 243 13 1 1 242 428381934 428382176 3.580000e-98 370.0
49 TraesCS3B01G576100 chr5B 91.797 256 15 2 1 250 473732392 473732647 1.300000e-92 351.0
50 TraesCS3B01G576100 chr5B 75.794 252 55 6 7835 8083 617167300 617167052 1.110000e-23 122.0
51 TraesCS3B01G576100 chr7D 86.667 780 60 20 3193 3948 28074191 28074950 0.000000e+00 824.0
52 TraesCS3B01G576100 chr7D 82.278 632 88 13 7466 8077 141231486 141230859 7.220000e-145 525.0
53 TraesCS3B01G576100 chr7D 80.441 680 108 13 7467 8125 37923918 37924593 5.660000e-136 496.0
54 TraesCS3B01G576100 chr7D 78.527 638 112 14 7466 8084 105556325 105556956 5.910000e-106 396.0
55 TraesCS3B01G576100 chr7D 89.189 185 17 3 4032 4216 28075003 28075184 2.280000e-55 228.0
56 TraesCS3B01G576100 chr2B 88.960 471 45 4 3222 3687 137370424 137369956 7.070000e-160 575.0
57 TraesCS3B01G576100 chr2B 82.775 418 53 10 7467 7866 714737494 714737910 1.000000e-93 355.0
58 TraesCS3B01G576100 chr2B 74.718 621 127 17 7468 8062 477156588 477155972 4.870000e-62 250.0
59 TraesCS3B01G576100 chr2B 88.649 185 18 3 4032 4216 137369510 137369329 1.060000e-53 222.0
60 TraesCS3B01G576100 chr2B 96.296 81 1 1 5454 5532 69204637 69204557 1.840000e-26 132.0
61 TraesCS3B01G576100 chr2B 76.699 206 37 11 7884 8083 476414771 476414571 4.010000e-18 104.0
62 TraesCS3B01G576100 chr2B 91.176 68 4 2 3934 4000 483452942 483453008 3.120000e-14 91.6
63 TraesCS3B01G576100 chr2A 82.448 621 91 10 7481 8084 694757646 694758265 2.010000e-145 527.0
64 TraesCS3B01G576100 chr2A 89.189 185 17 3 4032 4216 378229469 378229288 2.280000e-55 228.0
65 TraesCS3B01G576100 chr2A 89.041 73 8 0 3947 4019 244313124 244313196 3.120000e-14 91.6
66 TraesCS3B01G576100 chr4A 88.330 437 36 7 3260 3687 653023154 653022724 2.020000e-140 510.0
67 TraesCS3B01G576100 chr5A 79.479 653 93 25 7466 8090 546151217 546150578 7.540000e-115 425.0
68 TraesCS3B01G576100 chr5A 89.888 178 16 2 4032 4209 607323563 607323738 2.280000e-55 228.0
69 TraesCS3B01G576100 chr5A 96.341 82 3 0 5454 5535 634067153 634067234 1.420000e-27 135.0
70 TraesCS3B01G576100 chr5A 95.122 82 4 0 5451 5532 634067234 634067153 6.620000e-26 130.0
71 TraesCS3B01G576100 chr4B 94.737 247 8 1 1 242 597347224 597347470 5.950000e-101 379.0
72 TraesCS3B01G576100 chr4B 94.737 57 3 0 3944 4000 452721011 452720955 1.120000e-13 89.8
73 TraesCS3B01G576100 chr1B 92.032 251 18 2 1 249 512902460 512902710 1.300000e-92 351.0
74 TraesCS3B01G576100 chr1B 93.023 86 2 1 5451 5532 95298306 95298221 1.110000e-23 122.0
75 TraesCS3B01G576100 chr6A 88.649 185 18 3 4032 4216 65634830 65634649 1.060000e-53 222.0
76 TraesCS3B01G576100 chr5D 72.254 692 167 21 612 1291 513711376 513712054 2.990000e-44 191.0
77 TraesCS3B01G576100 chr5D 91.111 45 4 0 7883 7927 444725782 444725826 2.450000e-05 62.1
78 TraesCS3B01G576100 chr6D 94.318 88 3 1 5451 5536 10066105 10066018 5.120000e-27 134.0
79 TraesCS3B01G576100 chr1D 92.222 90 4 2 5446 5532 86902046 86902135 3.080000e-24 124.0
80 TraesCS3B01G576100 chr1D 89.706 68 6 1 3941 4007 29724153 29724086 1.450000e-12 86.1
81 TraesCS3B01G576100 chr1A 76.172 256 47 14 7835 8083 20084162 20084410 1.110000e-23 122.0
82 TraesCS3B01G576100 chr1A 75.197 254 53 10 7835 8083 312722152 312721904 2.400000e-20 111.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G576100 chr3B 806082128 806090252 8124 True 7152.500000 9110 100.000000 1 8125 2 chr3B.!!$R6 8124
1 TraesCS3B01G576100 chr3B 700341748 700344089 2341 True 3232.000000 3232 91.567000 245 2591 1 chr3B.!!$R4 2346
2 TraesCS3B01G576100 chr2D 595424058 595426391 2333 False 3729.000000 3729 95.443000 245 2591 1 chr2D.!!$F3 2346
3 TraesCS3B01G576100 chr2D 104590518 104591625 1107 False 398.500000 569 88.700000 3201 4216 2 chr2D.!!$F4 1015
4 TraesCS3B01G576100 chr6B 712990380 712992717 2337 False 3206.000000 3206 91.393000 245 2590 1 chr6B.!!$F2 2345
5 TraesCS3B01G576100 chr3D 564490691 564492930 2239 False 1803.000000 2252 95.706500 245 2588 2 chr3D.!!$F1 2343
6 TraesCS3B01G576100 chr3D 598885301 598891065 5764 True 993.833333 2178 88.933833 2611 8087 6 chr3D.!!$R2 5476
7 TraesCS3B01G576100 chr3A 728990853 728994970 4117 True 1317.250000 2244 91.419750 2682 7170 4 chr3A.!!$R3 4488
8 TraesCS3B01G576100 chr3A 569878094 569879187 1093 True 415.500000 603 89.605000 3222 4216 2 chr3A.!!$R2 994
9 TraesCS3B01G576100 chr3A 376082109 376083203 1094 True 401.500000 575 89.074500 3222 4216 2 chr3A.!!$R1 994
10 TraesCS3B01G576100 chr7B 196013650 196015278 1628 True 2098.000000 2098 89.932000 245 1872 1 chr7B.!!$R3 1627
11 TraesCS3B01G576100 chr7B 196004368 196005086 718 True 996.000000 996 91.598000 1869 2594 1 chr7B.!!$R2 725
12 TraesCS3B01G576100 chr7B 644207994 644208518 524 False 209.000000 209 74.393000 651 1174 1 chr7B.!!$F1 523
13 TraesCS3B01G576100 chr7A 734910948 734913292 2344 True 1315.000000 1315 77.027000 248 2591 1 chr7A.!!$R2 2343
14 TraesCS3B01G576100 chr5B 401136321 401138485 2164 True 1098.000000 1098 76.027000 248 2420 1 chr5B.!!$R2 2172
15 TraesCS3B01G576100 chr5B 532316636 532317184 548 True 436.000000 436 81.670000 7467 7996 1 chr5B.!!$R3 529
16 TraesCS3B01G576100 chr7D 28074191 28075184 993 False 526.000000 824 87.928000 3193 4216 2 chr7D.!!$F3 1023
17 TraesCS3B01G576100 chr7D 141230859 141231486 627 True 525.000000 525 82.278000 7466 8077 1 chr7D.!!$R1 611
18 TraesCS3B01G576100 chr7D 37923918 37924593 675 False 496.000000 496 80.441000 7467 8125 1 chr7D.!!$F1 658
19 TraesCS3B01G576100 chr7D 105556325 105556956 631 False 396.000000 396 78.527000 7466 8084 1 chr7D.!!$F2 618
20 TraesCS3B01G576100 chr2B 137369329 137370424 1095 True 398.500000 575 88.804500 3222 4216 2 chr2B.!!$R4 994
21 TraesCS3B01G576100 chr2B 477155972 477156588 616 True 250.000000 250 74.718000 7468 8062 1 chr2B.!!$R3 594
22 TraesCS3B01G576100 chr2A 694757646 694758265 619 False 527.000000 527 82.448000 7481 8084 1 chr2A.!!$F2 603
23 TraesCS3B01G576100 chr5A 546150578 546151217 639 True 425.000000 425 79.479000 7466 8090 1 chr5A.!!$R1 624

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
79 80 0.108329 AGAGGGCGTCGGTTACAATG 60.108 55.000 0.96 0.00 0.00 2.82 F
499 501 0.249398 GTCGGGACATGCCTAACACT 59.751 55.000 0.00 0.00 36.66 3.55 F
600 602 0.532417 CCGGTTGTCCCACGTAAACA 60.532 55.000 0.00 0.00 0.00 2.83 F
1974 1981 1.353022 CACCCTAGCCCAAACCTGTAA 59.647 52.381 0.00 0.00 0.00 2.41 F
2606 2623 0.539986 GGGCATGGTCCGAGTAAAGA 59.460 55.000 0.00 0.00 0.00 2.52 F
4325 5052 0.107361 TGAGGCTGATGCAGACCATG 60.107 55.000 0.00 0.00 41.11 3.66 F
4650 5377 0.108424 CAAGGAAGAGAGAGGCCGTG 60.108 60.000 0.00 0.00 0.00 4.94 F
4919 5972 0.888285 AGCTTCTCCAGTTGCACTGC 60.888 55.000 9.88 0.00 44.63 4.40 F
5477 6532 0.372334 CCTCCGTTCCAAATTACGCG 59.628 55.000 3.53 3.53 36.49 6.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1776 1781 0.038166 ATGGGTGCAGTTGGAATCGT 59.962 50.0 0.00 0.0 0.00 3.73 R
2247 2254 0.176680 TCAGAAGGATGAAGGAGCGC 59.823 55.0 0.00 0.0 0.00 5.92 R
2262 2269 0.543277 GCTGGTGGTGGATGATCAGA 59.457 55.0 0.09 0.0 0.00 3.27 R
3502 3605 0.392998 AGTTGTAATCTGCAGGCGGG 60.393 55.0 15.13 0.0 0.00 6.13 R
4375 5102 0.040958 GTTTCGCTGCTTGGTCTGTG 60.041 55.0 0.00 0.0 0.00 3.66 R
5458 6513 0.372334 CGCGTAATTTGGAACGGAGG 59.628 55.0 0.00 0.0 39.46 4.30 R
5461 6516 0.791422 TGACGCGTAATTTGGAACGG 59.209 50.0 13.97 0.0 39.46 4.44 R
6911 7990 0.101759 CGTATCCGTCCACGTCCATT 59.898 55.0 0.00 0.0 37.74 3.16 R
7323 8443 0.969917 AACACCACAGCCTTTGCACA 60.970 50.0 0.00 0.0 41.13 4.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 6.287107 CTATGGTATGATTGTTGTTCGTCC 57.713 41.667 0.00 0.00 0.00 4.79
24 25 4.280436 TGGTATGATTGTTGTTCGTCCT 57.720 40.909 0.00 0.00 0.00 3.85
25 26 5.408880 TGGTATGATTGTTGTTCGTCCTA 57.591 39.130 0.00 0.00 0.00 2.94
26 27 5.172934 TGGTATGATTGTTGTTCGTCCTAC 58.827 41.667 0.00 0.00 0.00 3.18
27 28 4.266976 GGTATGATTGTTGTTCGTCCTACG 59.733 45.833 0.00 0.00 44.19 3.51
28 29 2.679450 TGATTGTTGTTCGTCCTACGG 58.321 47.619 0.00 0.00 42.81 4.02
29 30 2.296752 TGATTGTTGTTCGTCCTACGGA 59.703 45.455 0.00 0.00 42.81 4.69
45 46 2.738013 CGGACTAAAACTCTCCGGTT 57.262 50.000 0.00 0.00 42.76 4.44
46 47 3.036075 CGGACTAAAACTCTCCGGTTT 57.964 47.619 0.00 0.00 42.76 3.27
47 48 4.178545 CGGACTAAAACTCTCCGGTTTA 57.821 45.455 0.00 0.00 42.76 2.01
48 49 4.752146 CGGACTAAAACTCTCCGGTTTAT 58.248 43.478 0.00 0.00 42.76 1.40
49 50 5.894807 CGGACTAAAACTCTCCGGTTTATA 58.105 41.667 0.00 0.00 42.76 0.98
50 51 6.510536 CGGACTAAAACTCTCCGGTTTATAT 58.489 40.000 0.00 0.00 42.76 0.86
51 52 7.651808 CGGACTAAAACTCTCCGGTTTATATA 58.348 38.462 0.00 0.00 42.76 0.86
52 53 7.806960 CGGACTAAAACTCTCCGGTTTATATAG 59.193 40.741 0.00 0.50 42.76 1.31
53 54 8.854117 GGACTAAAACTCTCCGGTTTATATAGA 58.146 37.037 0.00 0.00 38.30 1.98
54 55 9.676195 GACTAAAACTCTCCGGTTTATATAGAC 57.324 37.037 0.00 0.00 38.30 2.59
55 56 9.193806 ACTAAAACTCTCCGGTTTATATAGACA 57.806 33.333 0.00 0.00 38.30 3.41
56 57 9.460906 CTAAAACTCTCCGGTTTATATAGACAC 57.539 37.037 0.00 0.00 38.30 3.67
57 58 6.402456 AACTCTCCGGTTTATATAGACACC 57.598 41.667 0.00 2.59 0.00 4.16
63 64 5.044428 CGGTTTATATAGACACCGGAGAG 57.956 47.826 15.65 0.00 46.92 3.20
64 65 4.082895 CGGTTTATATAGACACCGGAGAGG 60.083 50.000 15.65 0.00 46.92 3.69
65 66 4.220163 GGTTTATATAGACACCGGAGAGGG 59.780 50.000 9.46 0.00 46.96 4.30
66 67 1.926108 ATATAGACACCGGAGAGGGC 58.074 55.000 9.46 0.00 46.96 5.19
67 68 0.536687 TATAGACACCGGAGAGGGCG 60.537 60.000 9.46 0.00 46.96 6.13
68 69 2.569218 ATAGACACCGGAGAGGGCGT 62.569 60.000 9.46 0.00 46.96 5.68
69 70 4.131088 GACACCGGAGAGGGCGTC 62.131 72.222 9.46 0.00 46.96 5.19
74 75 3.136123 CGGAGAGGGCGTCGGTTA 61.136 66.667 0.96 0.00 0.00 2.85
75 76 2.493501 GGAGAGGGCGTCGGTTAC 59.506 66.667 0.96 0.00 0.00 2.50
76 77 2.345760 GGAGAGGGCGTCGGTTACA 61.346 63.158 0.96 0.00 0.00 2.41
77 78 1.588082 GAGAGGGCGTCGGTTACAA 59.412 57.895 0.96 0.00 0.00 2.41
78 79 0.175073 GAGAGGGCGTCGGTTACAAT 59.825 55.000 0.96 0.00 0.00 2.71
79 80 0.108329 AGAGGGCGTCGGTTACAATG 60.108 55.000 0.96 0.00 0.00 2.82
80 81 1.078708 AGGGCGTCGGTTACAATGG 60.079 57.895 0.00 0.00 0.00 3.16
81 82 2.110352 GGGCGTCGGTTACAATGGG 61.110 63.158 0.00 0.00 0.00 4.00
82 83 1.078988 GGCGTCGGTTACAATGGGA 60.079 57.895 0.00 0.00 0.00 4.37
83 84 1.087771 GGCGTCGGTTACAATGGGAG 61.088 60.000 0.00 0.00 0.00 4.30
84 85 1.087771 GCGTCGGTTACAATGGGAGG 61.088 60.000 0.00 0.00 0.00 4.30
85 86 0.533491 CGTCGGTTACAATGGGAGGA 59.467 55.000 0.00 0.00 0.00 3.71
86 87 1.470979 CGTCGGTTACAATGGGAGGAG 60.471 57.143 0.00 0.00 0.00 3.69
87 88 1.829222 GTCGGTTACAATGGGAGGAGA 59.171 52.381 0.00 0.00 0.00 3.71
88 89 2.434702 GTCGGTTACAATGGGAGGAGAT 59.565 50.000 0.00 0.00 0.00 2.75
89 90 2.698797 TCGGTTACAATGGGAGGAGATC 59.301 50.000 0.00 0.00 0.00 2.75
90 91 2.700897 CGGTTACAATGGGAGGAGATCT 59.299 50.000 0.00 0.00 0.00 2.75
91 92 3.134804 CGGTTACAATGGGAGGAGATCTT 59.865 47.826 0.00 0.00 0.00 2.40
92 93 4.709250 GGTTACAATGGGAGGAGATCTTC 58.291 47.826 0.00 0.00 0.00 2.87
93 94 4.164221 GGTTACAATGGGAGGAGATCTTCA 59.836 45.833 3.21 0.00 0.00 3.02
94 95 5.163152 GGTTACAATGGGAGGAGATCTTCAT 60.163 44.000 3.21 0.00 0.00 2.57
95 96 6.043243 GGTTACAATGGGAGGAGATCTTCATA 59.957 42.308 3.21 0.00 0.00 2.15
96 97 7.256835 GGTTACAATGGGAGGAGATCTTCATAT 60.257 40.741 3.21 0.00 0.00 1.78
97 98 6.371595 ACAATGGGAGGAGATCTTCATATC 57.628 41.667 3.21 0.00 0.00 1.63
98 99 5.046735 ACAATGGGAGGAGATCTTCATATCG 60.047 44.000 3.21 0.00 0.00 2.92
99 100 4.119556 TGGGAGGAGATCTTCATATCGT 57.880 45.455 3.21 0.00 0.00 3.73
100 101 5.256806 TGGGAGGAGATCTTCATATCGTA 57.743 43.478 3.21 0.00 0.00 3.43
101 102 5.832221 TGGGAGGAGATCTTCATATCGTAT 58.168 41.667 3.21 0.00 0.00 3.06
102 103 5.888724 TGGGAGGAGATCTTCATATCGTATC 59.111 44.000 3.21 0.00 0.00 2.24
103 104 5.008217 GGGAGGAGATCTTCATATCGTATCG 59.992 48.000 3.21 0.00 0.00 2.92
104 105 5.493133 AGGAGATCTTCATATCGTATCGC 57.507 43.478 3.21 0.00 0.00 4.58
105 106 4.336993 AGGAGATCTTCATATCGTATCGCC 59.663 45.833 3.21 0.00 36.95 5.54
106 107 4.096532 GGAGATCTTCATATCGTATCGCCA 59.903 45.833 0.00 0.00 36.76 5.69
107 108 5.393135 GGAGATCTTCATATCGTATCGCCAA 60.393 44.000 0.00 0.00 36.76 4.52
108 109 5.645624 AGATCTTCATATCGTATCGCCAAG 58.354 41.667 0.00 0.00 0.00 3.61
109 110 3.575630 TCTTCATATCGTATCGCCAAGC 58.424 45.455 0.00 0.00 0.00 4.01
110 111 3.255888 TCTTCATATCGTATCGCCAAGCT 59.744 43.478 0.00 0.00 0.00 3.74
111 112 3.660501 TCATATCGTATCGCCAAGCTT 57.339 42.857 0.00 0.00 0.00 3.74
112 113 3.317150 TCATATCGTATCGCCAAGCTTG 58.683 45.455 19.93 19.93 0.00 4.01
113 114 1.497991 TATCGTATCGCCAAGCTTGC 58.502 50.000 21.43 14.85 0.00 4.01
114 115 1.160329 ATCGTATCGCCAAGCTTGCC 61.160 55.000 21.43 9.45 0.00 4.52
115 116 1.815421 CGTATCGCCAAGCTTGCCT 60.815 57.895 21.43 7.17 0.00 4.75
116 117 1.369091 CGTATCGCCAAGCTTGCCTT 61.369 55.000 21.43 7.68 0.00 4.35
117 118 0.378610 GTATCGCCAAGCTTGCCTTC 59.621 55.000 21.43 8.32 0.00 3.46
118 119 0.748005 TATCGCCAAGCTTGCCTTCC 60.748 55.000 21.43 5.26 0.00 3.46
119 120 2.769652 ATCGCCAAGCTTGCCTTCCA 62.770 55.000 21.43 1.33 0.00 3.53
120 121 2.653115 GCCAAGCTTGCCTTCCAC 59.347 61.111 21.43 0.12 0.00 4.02
121 122 2.956987 CCAAGCTTGCCTTCCACG 59.043 61.111 21.43 0.62 0.00 4.94
122 123 2.256461 CAAGCTTGCCTTCCACGC 59.744 61.111 14.65 0.00 38.87 5.34
123 124 2.985847 AAGCTTGCCTTCCACGCC 60.986 61.111 0.00 0.00 39.36 5.68
124 125 3.790416 AAGCTTGCCTTCCACGCCA 62.790 57.895 0.00 0.00 39.36 5.69
125 126 3.294493 GCTTGCCTTCCACGCCAA 61.294 61.111 0.00 0.00 32.93 4.52
126 127 2.956987 CTTGCCTTCCACGCCAAG 59.043 61.111 0.00 0.00 0.00 3.61
127 128 2.597217 TTGCCTTCCACGCCAAGG 60.597 61.111 3.73 3.73 43.13 3.61
128 129 3.126703 TTGCCTTCCACGCCAAGGA 62.127 57.895 10.97 0.00 42.94 3.36
129 130 2.282180 GCCTTCCACGCCAAGGAA 60.282 61.111 10.97 5.63 42.94 3.36
130 131 1.901464 GCCTTCCACGCCAAGGAAA 60.901 57.895 10.97 0.00 44.07 3.13
131 132 1.866853 GCCTTCCACGCCAAGGAAAG 61.867 60.000 10.97 2.24 44.07 2.62
132 133 0.537371 CCTTCCACGCCAAGGAAAGT 60.537 55.000 2.12 0.00 44.07 2.66
133 134 0.875059 CTTCCACGCCAAGGAAAGTC 59.125 55.000 0.00 0.00 44.07 3.01
134 135 0.536460 TTCCACGCCAAGGAAAGTCC 60.536 55.000 0.00 0.00 41.94 3.85
135 136 1.971695 CCACGCCAAGGAAAGTCCC 60.972 63.158 0.00 0.00 37.19 4.46
136 137 1.228124 CACGCCAAGGAAAGTCCCA 60.228 57.895 0.00 0.00 37.19 4.37
137 138 0.609131 CACGCCAAGGAAAGTCCCAT 60.609 55.000 0.00 0.00 37.19 4.00
138 139 0.322546 ACGCCAAGGAAAGTCCCATC 60.323 55.000 0.00 0.00 37.19 3.51
139 140 1.032114 CGCCAAGGAAAGTCCCATCC 61.032 60.000 0.00 0.00 37.19 3.51
140 141 1.032114 GCCAAGGAAAGTCCCATCCG 61.032 60.000 0.00 0.00 40.78 4.18
141 142 0.394352 CCAAGGAAAGTCCCATCCGG 60.394 60.000 0.00 0.00 40.78 5.14
142 143 0.618458 CAAGGAAAGTCCCATCCGGA 59.382 55.000 6.61 6.61 40.78 5.14
171 172 5.923733 ACGGAGTCTTCAATCTTGTATCT 57.076 39.130 0.00 0.00 29.74 1.98
172 173 6.287589 ACGGAGTCTTCAATCTTGTATCTT 57.712 37.500 0.00 0.00 29.74 2.40
173 174 6.334202 ACGGAGTCTTCAATCTTGTATCTTC 58.666 40.000 0.00 0.00 29.74 2.87
174 175 6.071334 ACGGAGTCTTCAATCTTGTATCTTCA 60.071 38.462 0.00 0.00 29.74 3.02
175 176 6.983307 CGGAGTCTTCAATCTTGTATCTTCAT 59.017 38.462 0.00 0.00 0.00 2.57
176 177 8.138074 CGGAGTCTTCAATCTTGTATCTTCATA 58.862 37.037 0.00 0.00 0.00 2.15
177 178 9.474920 GGAGTCTTCAATCTTGTATCTTCATAG 57.525 37.037 0.00 0.00 0.00 2.23
180 181 9.255304 GTCTTCAATCTTGTATCTTCATAGTCC 57.745 37.037 0.00 0.00 0.00 3.85
181 182 8.138074 TCTTCAATCTTGTATCTTCATAGTCCG 58.862 37.037 0.00 0.00 0.00 4.79
182 183 6.749139 TCAATCTTGTATCTTCATAGTCCGG 58.251 40.000 0.00 0.00 0.00 5.14
183 184 5.730296 ATCTTGTATCTTCATAGTCCGGG 57.270 43.478 0.00 0.00 0.00 5.73
184 185 4.800023 TCTTGTATCTTCATAGTCCGGGA 58.200 43.478 0.00 0.00 0.00 5.14
185 186 4.827835 TCTTGTATCTTCATAGTCCGGGAG 59.172 45.833 0.00 0.00 0.00 4.30
186 187 4.180377 TGTATCTTCATAGTCCGGGAGT 57.820 45.455 9.75 9.75 0.00 3.85
187 188 4.142790 TGTATCTTCATAGTCCGGGAGTC 58.857 47.826 7.86 0.00 0.00 3.36
188 189 2.068834 TCTTCATAGTCCGGGAGTCC 57.931 55.000 7.86 0.00 0.00 3.85
198 199 3.647771 GGGAGTCCGGCCAAAGGT 61.648 66.667 2.24 0.00 0.00 3.50
199 200 2.046217 GGAGTCCGGCCAAAGGTC 60.046 66.667 2.24 0.00 0.00 3.85
200 201 2.747686 GAGTCCGGCCAAAGGTCA 59.252 61.111 2.24 0.00 0.00 4.02
201 202 1.299976 GAGTCCGGCCAAAGGTCAT 59.700 57.895 2.24 0.00 0.00 3.06
202 203 0.539986 GAGTCCGGCCAAAGGTCATA 59.460 55.000 2.24 0.00 0.00 2.15
203 204 0.541863 AGTCCGGCCAAAGGTCATAG 59.458 55.000 2.24 0.00 0.00 2.23
204 205 0.252197 GTCCGGCCAAAGGTCATAGT 59.748 55.000 2.24 0.00 0.00 2.12
205 206 0.539986 TCCGGCCAAAGGTCATAGTC 59.460 55.000 2.24 0.00 0.00 2.59
206 207 0.463833 CCGGCCAAAGGTCATAGTCC 60.464 60.000 2.24 0.00 0.00 3.85
207 208 0.251916 CGGCCAAAGGTCATAGTCCA 59.748 55.000 2.24 0.00 0.00 4.02
208 209 1.743772 CGGCCAAAGGTCATAGTCCAG 60.744 57.143 2.24 0.00 0.00 3.86
209 210 1.383523 GCCAAAGGTCATAGTCCAGC 58.616 55.000 0.00 0.00 0.00 4.85
210 211 2.019156 GCCAAAGGTCATAGTCCAGCC 61.019 57.143 0.00 0.00 0.00 4.85
211 212 1.281867 CCAAAGGTCATAGTCCAGCCA 59.718 52.381 0.00 0.00 0.00 4.75
212 213 2.636830 CAAAGGTCATAGTCCAGCCAG 58.363 52.381 0.00 0.00 0.00 4.85
213 214 0.543749 AAGGTCATAGTCCAGCCAGC 59.456 55.000 0.00 0.00 0.00 4.85
214 215 1.147153 GGTCATAGTCCAGCCAGCC 59.853 63.158 0.00 0.00 0.00 4.85
215 216 1.227380 GTCATAGTCCAGCCAGCCG 60.227 63.158 0.00 0.00 0.00 5.52
216 217 2.109799 CATAGTCCAGCCAGCCGG 59.890 66.667 0.00 0.00 0.00 6.13
217 218 2.041922 ATAGTCCAGCCAGCCGGA 60.042 61.111 5.05 0.00 0.00 5.14
227 228 3.006728 CAGCCGGACACCCCCTAA 61.007 66.667 5.05 0.00 0.00 2.69
228 229 2.042261 AGCCGGACACCCCCTAAT 59.958 61.111 5.05 0.00 0.00 1.73
229 230 2.070650 AGCCGGACACCCCCTAATC 61.071 63.158 5.05 0.00 0.00 1.75
230 231 3.116137 GCCGGACACCCCCTAATCC 62.116 68.421 5.05 0.00 0.00 3.01
231 232 1.691337 CCGGACACCCCCTAATCCA 60.691 63.158 0.00 0.00 0.00 3.41
232 233 1.696097 CCGGACACCCCCTAATCCAG 61.696 65.000 0.00 0.00 0.00 3.86
233 234 1.696097 CGGACACCCCCTAATCCAGG 61.696 65.000 0.00 0.00 45.07 4.45
276 277 2.936919 TGTGCTTCCAATCTGTGAGT 57.063 45.000 0.00 0.00 0.00 3.41
357 358 1.751927 CTCCCATGCAGCCTTCACC 60.752 63.158 0.00 0.00 0.00 4.02
396 397 2.125552 CGTCGCCATGCTTCCTCA 60.126 61.111 0.00 0.00 0.00 3.86
443 444 2.821969 CCTCCCAATCCACTTGTTTCTG 59.178 50.000 0.00 0.00 32.61 3.02
499 501 0.249398 GTCGGGACATGCCTAACACT 59.751 55.000 0.00 0.00 36.66 3.55
535 537 1.489649 CTGGATGAAGGCTGGATCAGT 59.510 52.381 7.97 0.00 33.43 3.41
536 538 2.702478 CTGGATGAAGGCTGGATCAGTA 59.298 50.000 7.97 0.00 33.43 2.74
597 599 2.030862 GCCGGTTGTCCCACGTAA 59.969 61.111 1.90 0.00 0.00 3.18
600 602 0.532417 CCGGTTGTCCCACGTAAACA 60.532 55.000 0.00 0.00 0.00 2.83
850 853 3.603158 AAAACGCCACTCTTTTTGGTT 57.397 38.095 0.00 0.00 36.40 3.67
1156 1160 4.431131 CATTGCTCCTGGCGGGGT 62.431 66.667 13.58 0.00 45.43 4.95
1187 1191 2.939640 GCCTCCGCCTTTTCACTTGATA 60.940 50.000 0.00 0.00 0.00 2.15
1203 1208 3.951563 TGATATTTCCCCCTCAACTGG 57.048 47.619 0.00 0.00 0.00 4.00
1242 1247 6.601332 AGTCTCTACTATCCTCCTTTGAGAG 58.399 44.000 0.00 0.00 35.87 3.20
1372 1377 4.304110 GACGATACACTTTGTTCTGACCA 58.696 43.478 0.00 0.00 0.00 4.02
1373 1378 4.699637 ACGATACACTTTGTTCTGACCAA 58.300 39.130 0.00 0.00 0.00 3.67
1392 1397 3.623060 CCAATTCCACGTGACCTATCAAG 59.377 47.826 19.30 0.00 39.91 3.02
1505 1510 5.684704 TCAATGGTGAAGTCACTTCTTCTT 58.315 37.500 18.49 6.26 45.73 2.52
1633 1638 3.037549 CCCTGACCATCTAAGCTTCTCT 58.962 50.000 0.00 0.00 0.00 3.10
1705 1710 1.522668 CTTTTGCATGACCCAGACGA 58.477 50.000 0.00 0.00 0.00 4.20
1776 1781 7.074653 ACAGTATAGTTTTCTTGGTTCTGGA 57.925 36.000 0.00 0.00 0.00 3.86
1852 1858 4.260170 GTGCTCTGAGTGATTCTCCAAAT 58.740 43.478 6.53 0.00 42.12 2.32
1974 1981 1.353022 CACCCTAGCCCAAACCTGTAA 59.647 52.381 0.00 0.00 0.00 2.41
2055 2062 1.377229 GTTTCCCCACCATCCACGA 59.623 57.895 0.00 0.00 0.00 4.35
2262 2269 2.592308 GGGCGCTCCTTCATCCTT 59.408 61.111 7.64 0.00 0.00 3.36
2306 2313 3.056891 CCTGTTCTCCTTCTCAGTCAGAC 60.057 52.174 0.00 0.00 0.00 3.51
2381 2391 0.742281 CGCCATGTTGACTCTCCCTG 60.742 60.000 0.00 0.00 0.00 4.45
2391 2401 1.285373 GACTCTCCCTGACCCTAGACA 59.715 57.143 0.00 0.00 0.00 3.41
2394 2404 1.000019 TCCCTGACCCTAGACACCG 60.000 63.158 0.00 0.00 0.00 4.94
2581 2598 4.224370 TCTCGCCACTAAACCCTAGAAAAT 59.776 41.667 0.00 0.00 0.00 1.82
2591 2608 1.340600 CCCTAGAAAATGGTTCGGGCA 60.341 52.381 0.00 0.00 0.00 5.36
2594 2611 1.185315 AGAAAATGGTTCGGGCATGG 58.815 50.000 0.00 0.00 0.00 3.66
2595 2612 0.894835 GAAAATGGTTCGGGCATGGT 59.105 50.000 0.00 0.00 0.00 3.55
2596 2613 0.894835 AAAATGGTTCGGGCATGGTC 59.105 50.000 0.00 0.00 0.00 4.02
2597 2614 0.970427 AAATGGTTCGGGCATGGTCC 60.970 55.000 0.00 0.00 0.00 4.46
2605 2622 3.080647 GGGCATGGTCCGAGTAAAG 57.919 57.895 0.00 0.00 0.00 1.85
2606 2623 0.539986 GGGCATGGTCCGAGTAAAGA 59.460 55.000 0.00 0.00 0.00 2.52
2607 2624 1.473434 GGGCATGGTCCGAGTAAAGAG 60.473 57.143 0.00 0.00 0.00 2.85
2608 2625 1.291132 GCATGGTCCGAGTAAAGAGC 58.709 55.000 0.00 0.00 0.00 4.09
2609 2626 1.405526 GCATGGTCCGAGTAAAGAGCA 60.406 52.381 0.00 0.00 43.93 4.26
2618 2635 5.815740 GTCCGAGTAAAGAGCAATTTATGGA 59.184 40.000 0.00 0.00 0.00 3.41
2650 2667 9.551339 TTATAGGTGACTCTAACCCTAGAAAAA 57.449 33.333 0.00 0.00 43.67 1.94
3406 3479 2.805353 CGCCCAGTTCGACGACAG 60.805 66.667 0.00 0.00 0.00 3.51
3496 3599 4.619227 CACCGTGCGTCCCCTGTT 62.619 66.667 0.00 0.00 0.00 3.16
3536 3639 0.671781 CAACTTGCTGGAGGAGACGG 60.672 60.000 0.00 0.00 0.00 4.79
3610 3749 3.997064 CTGCAGCTTCGAGGGACGG 62.997 68.421 0.00 0.00 42.82 4.79
3613 3752 4.070552 AGCTTCGAGGGACGGCAC 62.071 66.667 0.00 0.00 42.82 5.01
3688 3827 4.516195 GTCCGGCTCGCCTTCCTC 62.516 72.222 6.35 0.00 0.00 3.71
3694 3833 3.474570 CTCGCCTTCCTCCCCAGG 61.475 72.222 0.00 0.00 42.01 4.45
3714 3853 2.503061 CATGACCAGGAGGGAGCG 59.497 66.667 0.00 0.00 41.15 5.03
3753 3892 4.082679 CGACAGGAGGTATATCTTAGTGCC 60.083 50.000 0.00 0.00 0.00 5.01
3799 3938 5.123820 TGTCTGTCGCGATATGATGATGATA 59.876 40.000 14.06 0.00 0.00 2.15
3800 3939 6.183360 TGTCTGTCGCGATATGATGATGATAT 60.183 38.462 14.06 0.00 0.00 1.63
3802 3941 7.857885 GTCTGTCGCGATATGATGATGATATTA 59.142 37.037 14.06 0.00 0.00 0.98
3803 3942 7.857885 TCTGTCGCGATATGATGATGATATTAC 59.142 37.037 14.06 0.00 0.00 1.89
3825 3983 8.854979 TTACTGAAGTTGATTTTGTGTCAATG 57.145 30.769 0.00 0.00 37.84 2.82
3826 3984 6.275335 ACTGAAGTTGATTTTGTGTCAATGG 58.725 36.000 0.00 0.00 37.84 3.16
3832 3990 5.781210 TGATTTTGTGTCAATGGCTGTTA 57.219 34.783 0.00 0.00 0.00 2.41
3888 4047 6.107901 ACTGTAGAGAAGTGAAATGCTCTT 57.892 37.500 0.00 0.00 38.56 2.85
3889 4048 7.233389 ACTGTAGAGAAGTGAAATGCTCTTA 57.767 36.000 0.00 0.00 38.56 2.10
3891 4050 8.150945 ACTGTAGAGAAGTGAAATGCTCTTAAA 58.849 33.333 0.00 0.00 38.56 1.52
3892 4051 9.160496 CTGTAGAGAAGTGAAATGCTCTTAAAT 57.840 33.333 0.00 0.00 38.56 1.40
3944 4103 9.499479 CTTTGCCTATGTATTCAGTAATCATCT 57.501 33.333 0.00 0.00 0.00 2.90
3946 4105 9.929180 TTGCCTATGTATTCAGTAATCATCTAC 57.071 33.333 0.00 0.00 0.00 2.59
3948 4107 9.796120 GCCTATGTATTCAGTAATCATCTACTC 57.204 37.037 0.00 0.00 29.36 2.59
3951 4110 8.964533 ATGTATTCAGTAATCATCTACTCCCT 57.035 34.615 0.00 0.00 29.36 4.20
3952 4111 8.410673 TGTATTCAGTAATCATCTACTCCCTC 57.589 38.462 0.00 0.00 29.36 4.30
3953 4112 8.228206 TGTATTCAGTAATCATCTACTCCCTCT 58.772 37.037 0.00 0.00 29.36 3.69
3954 4113 6.968263 TTCAGTAATCATCTACTCCCTCTG 57.032 41.667 0.00 0.00 29.36 3.35
3955 4114 6.019656 TCAGTAATCATCTACTCCCTCTGT 57.980 41.667 0.00 0.00 29.36 3.41
3956 4115 5.830457 TCAGTAATCATCTACTCCCTCTGTG 59.170 44.000 0.00 0.00 29.36 3.66
3957 4116 5.830457 CAGTAATCATCTACTCCCTCTGTGA 59.170 44.000 0.00 0.00 29.36 3.58
3958 4117 6.322456 CAGTAATCATCTACTCCCTCTGTGAA 59.678 42.308 0.00 0.00 29.36 3.18
3959 4118 7.015098 CAGTAATCATCTACTCCCTCTGTGAAT 59.985 40.741 0.00 0.00 29.36 2.57
3960 4119 8.228206 AGTAATCATCTACTCCCTCTGTGAATA 58.772 37.037 0.00 0.00 0.00 1.75
3961 4120 7.921041 AATCATCTACTCCCTCTGTGAATAA 57.079 36.000 0.00 0.00 0.00 1.40
3963 4122 7.921041 TCATCTACTCCCTCTGTGAATAAAT 57.079 36.000 0.00 0.00 0.00 1.40
3964 4123 9.607333 ATCATCTACTCCCTCTGTGAATAAATA 57.393 33.333 0.00 0.00 0.00 1.40
3972 4299 9.703892 CTCCCTCTGTGAATAAATATAAGAGTG 57.296 37.037 0.00 0.00 0.00 3.51
4010 4337 9.874215 ACTTTAGTGATTTAAAGTTCTAAACGC 57.126 29.630 12.91 0.00 46.42 4.84
4014 4341 8.379457 AGTGATTTAAAGTTCTAAACGCTCTT 57.621 30.769 0.00 0.00 36.23 2.85
4015 4342 9.485206 AGTGATTTAAAGTTCTAAACGCTCTTA 57.515 29.630 0.00 0.00 36.23 2.10
4027 4354 9.661187 TTCTAAACGCTCTTATATCTCTTTACG 57.339 33.333 0.00 0.00 0.00 3.18
4028 4355 9.049523 TCTAAACGCTCTTATATCTCTTTACGA 57.950 33.333 0.00 0.00 0.00 3.43
4029 4356 9.828852 CTAAACGCTCTTATATCTCTTTACGAT 57.171 33.333 0.00 0.00 0.00 3.73
4157 4864 6.398918 TGTCTAGAACTAGAAGACATTTGCC 58.601 40.000 12.30 0.00 43.45 4.52
4170 4877 5.894807 AGACATTTGCCGAAAATTAGGATG 58.105 37.500 0.00 0.00 36.28 3.51
4195 4902 4.467795 AGAAGCTAGAAGGATGCACAACTA 59.532 41.667 0.00 0.00 0.00 2.24
4196 4903 4.826274 AGCTAGAAGGATGCACAACTAA 57.174 40.909 0.00 0.00 0.00 2.24
4200 4907 3.084786 AGAAGGATGCACAACTAAAGGC 58.915 45.455 0.00 0.00 0.00 4.35
4269 4976 1.439543 AAGAACAGAGGGGCAAGAGT 58.560 50.000 0.00 0.00 0.00 3.24
4296 5003 2.920076 AAACAACCTTCGGCAGCCCA 62.920 55.000 5.63 0.00 0.00 5.36
4297 5004 2.361610 CAACCTTCGGCAGCCCAT 60.362 61.111 5.63 0.00 0.00 4.00
4317 5044 1.085091 CTGTTGACTGAGGCTGATGC 58.915 55.000 0.00 0.00 38.76 3.91
4318 5045 0.397564 TGTTGACTGAGGCTGATGCA 59.602 50.000 0.00 0.00 41.91 3.96
4319 5046 1.085091 GTTGACTGAGGCTGATGCAG 58.915 55.000 0.00 0.00 41.91 4.41
4320 5047 0.978907 TTGACTGAGGCTGATGCAGA 59.021 50.000 7.83 0.00 41.91 4.26
4321 5048 0.248565 TGACTGAGGCTGATGCAGAC 59.751 55.000 7.83 2.76 40.37 3.51
4322 5049 0.461693 GACTGAGGCTGATGCAGACC 60.462 60.000 7.83 0.00 41.11 3.85
4323 5050 1.196766 ACTGAGGCTGATGCAGACCA 61.197 55.000 7.83 0.00 41.11 4.02
4324 5051 0.180642 CTGAGGCTGATGCAGACCAT 59.819 55.000 0.00 0.00 41.11 3.55
4325 5052 0.107361 TGAGGCTGATGCAGACCATG 60.107 55.000 0.00 0.00 41.11 3.66
4326 5053 0.179702 GAGGCTGATGCAGACCATGA 59.820 55.000 0.00 0.00 41.11 3.07
4327 5054 0.180642 AGGCTGATGCAGACCATGAG 59.819 55.000 0.00 0.00 41.11 2.90
4328 5055 0.818445 GGCTGATGCAGACCATGAGG 60.818 60.000 0.00 0.00 41.91 3.86
4329 5056 0.179702 GCTGATGCAGACCATGAGGA 59.820 55.000 0.00 0.00 35.91 3.71
4330 5057 1.810794 GCTGATGCAGACCATGAGGAG 60.811 57.143 0.00 0.00 35.91 3.69
4331 5058 0.835276 TGATGCAGACCATGAGGAGG 59.165 55.000 0.00 0.00 38.69 4.30
4332 5059 0.534652 GATGCAGACCATGAGGAGGC 60.535 60.000 0.00 0.00 38.69 4.70
4333 5060 2.202987 GCAGACCATGAGGAGGCG 60.203 66.667 0.00 0.00 38.69 5.52
4334 5061 2.725312 GCAGACCATGAGGAGGCGA 61.725 63.158 0.00 0.00 38.69 5.54
4335 5062 1.142748 CAGACCATGAGGAGGCGAC 59.857 63.158 0.00 0.00 38.69 5.19
4336 5063 2.105128 GACCATGAGGAGGCGACG 59.895 66.667 0.00 0.00 38.69 5.12
4342 5069 3.760035 GAGGAGGCGACGCTTGGA 61.760 66.667 20.77 0.00 0.00 3.53
4349 5076 1.880340 GCGACGCTTGGATCTCTGG 60.880 63.158 13.73 0.00 0.00 3.86
4352 5079 1.134367 CGACGCTTGGATCTCTGGTTA 59.866 52.381 0.00 0.00 0.00 2.85
4366 5093 0.973632 TGGTTACTCTGTGCCACGAT 59.026 50.000 0.00 0.00 0.00 3.73
4369 5096 1.993370 GTTACTCTGTGCCACGATCAC 59.007 52.381 0.00 0.00 35.14 3.06
4370 5097 1.253100 TACTCTGTGCCACGATCACA 58.747 50.000 0.00 0.00 41.62 3.58
4373 5100 4.994744 TGTGCCACGATCACAGAG 57.005 55.556 0.00 0.00 39.29 3.35
4374 5101 1.293179 TGTGCCACGATCACAGAGG 59.707 57.895 0.00 0.00 39.29 3.69
4375 5102 2.103042 GTGCCACGATCACAGAGGC 61.103 63.158 0.00 0.00 45.41 4.70
4376 5103 2.265739 GCCACGATCACAGAGGCA 59.734 61.111 0.00 0.00 44.59 4.75
4397 5124 0.463654 AGACCAAGCAGCGAAACACA 60.464 50.000 0.00 0.00 0.00 3.72
4426 5153 6.070656 TGATTGTTCAGATTTTCAGAAGGGT 58.929 36.000 0.00 0.00 0.00 4.34
4433 5160 4.159135 CAGATTTTCAGAAGGGTGGATTGG 59.841 45.833 0.00 0.00 0.00 3.16
4453 5180 8.406297 GGATTGGATGTAAAATCAGTAGGAAAC 58.594 37.037 0.00 0.00 35.00 2.78
4480 5207 8.474025 CCCCTAATTTATATGTTGCAGTTGAAA 58.526 33.333 0.00 0.00 0.00 2.69
4616 5343 3.091545 TGGAGAGATTTGATTTGCCACC 58.908 45.455 0.00 0.00 0.00 4.61
4647 5374 1.480545 GAGTCAAGGAAGAGAGAGGCC 59.519 57.143 0.00 0.00 0.00 5.19
4649 5376 0.251832 TCAAGGAAGAGAGAGGCCGT 60.252 55.000 0.00 0.00 0.00 5.68
4650 5377 0.108424 CAAGGAAGAGAGAGGCCGTG 60.108 60.000 0.00 0.00 0.00 4.94
4675 5402 4.976116 GGAATTTGATGCGCTATGTAAACC 59.024 41.667 9.73 0.45 0.00 3.27
4720 5447 7.276438 CGTGTGAATGTGATAGAAAGAGATGAA 59.724 37.037 0.00 0.00 0.00 2.57
4721 5448 8.602328 GTGTGAATGTGATAGAAAGAGATGAAG 58.398 37.037 0.00 0.00 0.00 3.02
4722 5449 8.534496 TGTGAATGTGATAGAAAGAGATGAAGA 58.466 33.333 0.00 0.00 0.00 2.87
4758 5487 3.192630 ATGGGCCTGGGTTGGTGT 61.193 61.111 4.53 0.00 0.00 4.16
4919 5972 0.888285 AGCTTCTCCAGTTGCACTGC 60.888 55.000 9.88 0.00 44.63 4.40
4971 6024 4.067972 ACTTTTGCTACTCGGAAGTTCA 57.932 40.909 5.01 0.00 36.92 3.18
5005 6060 5.690865 TCTAGTCCTTGATTGTTGTGGTTT 58.309 37.500 0.00 0.00 0.00 3.27
5121 6176 5.006386 AGTTTGTCCTCTCCTTGCTATTTG 58.994 41.667 0.00 0.00 0.00 2.32
5215 6270 6.105333 TGTTAATAATTTGTGCAAGCATCCC 58.895 36.000 0.00 0.00 0.00 3.85
5219 6274 1.340088 TTTGTGCAAGCATCCCATGT 58.660 45.000 0.00 0.00 0.00 3.21
5249 6304 6.331369 ACATTTGAATGAACCTTACCAGTG 57.669 37.500 10.48 0.00 39.67 3.66
5438 6493 8.519526 CAATCCTTGTTAGTTTAGCACCATTTA 58.480 33.333 0.00 0.00 0.00 1.40
5446 6501 9.556030 GTTAGTTTAGCACCATTTAAAGATGAC 57.444 33.333 0.00 0.00 0.00 3.06
5462 6517 6.926630 AAGATGACAAGATATACTCCCTCC 57.073 41.667 0.00 0.00 0.00 4.30
5463 6518 5.013547 AGATGACAAGATATACTCCCTCCG 58.986 45.833 0.00 0.00 0.00 4.63
5464 6519 4.180377 TGACAAGATATACTCCCTCCGT 57.820 45.455 0.00 0.00 0.00 4.69
5465 6520 4.543689 TGACAAGATATACTCCCTCCGTT 58.456 43.478 0.00 0.00 0.00 4.44
5466 6521 4.583489 TGACAAGATATACTCCCTCCGTTC 59.417 45.833 0.00 0.00 0.00 3.95
5467 6522 3.896272 ACAAGATATACTCCCTCCGTTCC 59.104 47.826 0.00 0.00 0.00 3.62
5468 6523 3.895656 CAAGATATACTCCCTCCGTTCCA 59.104 47.826 0.00 0.00 0.00 3.53
5469 6524 4.194678 AGATATACTCCCTCCGTTCCAA 57.805 45.455 0.00 0.00 0.00 3.53
5470 6525 4.553678 AGATATACTCCCTCCGTTCCAAA 58.446 43.478 0.00 0.00 0.00 3.28
5471 6526 5.155905 AGATATACTCCCTCCGTTCCAAAT 58.844 41.667 0.00 0.00 0.00 2.32
5472 6527 5.607171 AGATATACTCCCTCCGTTCCAAATT 59.393 40.000 0.00 0.00 0.00 1.82
5473 6528 6.785963 AGATATACTCCCTCCGTTCCAAATTA 59.214 38.462 0.00 0.00 0.00 1.40
5474 6529 3.345508 ACTCCCTCCGTTCCAAATTAC 57.654 47.619 0.00 0.00 0.00 1.89
5475 6530 2.277084 CTCCCTCCGTTCCAAATTACG 58.723 52.381 0.00 0.00 37.50 3.18
5476 6531 0.730840 CCCTCCGTTCCAAATTACGC 59.269 55.000 0.00 0.00 36.49 4.42
5477 6532 0.372334 CCTCCGTTCCAAATTACGCG 59.628 55.000 3.53 3.53 36.49 6.01
5478 6533 1.073177 CTCCGTTCCAAATTACGCGT 58.927 50.000 19.17 19.17 36.49 6.01
5479 6534 1.060122 CTCCGTTCCAAATTACGCGTC 59.940 52.381 18.63 0.00 36.49 5.19
5480 6535 0.791422 CCGTTCCAAATTACGCGTCA 59.209 50.000 18.63 4.77 36.49 4.35
5481 6536 1.395608 CCGTTCCAAATTACGCGTCAT 59.604 47.619 18.63 7.86 36.49 3.06
5482 6537 2.427169 CGTTCCAAATTACGCGTCATG 58.573 47.619 18.63 10.81 0.00 3.07
5483 6538 2.780993 GTTCCAAATTACGCGTCATGG 58.219 47.619 18.63 19.69 0.00 3.66
5484 6539 2.102070 TCCAAATTACGCGTCATGGT 57.898 45.000 18.63 0.00 0.00 3.55
5485 6540 2.428491 TCCAAATTACGCGTCATGGTT 58.572 42.857 18.63 0.00 0.00 3.67
5486 6541 2.814919 TCCAAATTACGCGTCATGGTTT 59.185 40.909 18.63 8.19 0.00 3.27
5487 6542 3.253677 TCCAAATTACGCGTCATGGTTTT 59.746 39.130 18.63 5.11 0.00 2.43
5488 6543 4.454847 TCCAAATTACGCGTCATGGTTTTA 59.545 37.500 18.63 1.35 0.00 1.52
5489 6544 4.791163 CCAAATTACGCGTCATGGTTTTAG 59.209 41.667 18.63 1.70 0.00 1.85
5490 6545 5.387279 CAAATTACGCGTCATGGTTTTAGT 58.613 37.500 18.63 0.00 0.00 2.24
5491 6546 5.616488 AATTACGCGTCATGGTTTTAGTT 57.384 34.783 18.63 0.00 0.00 2.24
5492 6547 2.961522 ACGCGTCATGGTTTTAGTTG 57.038 45.000 5.58 0.00 0.00 3.16
5493 6548 2.485903 ACGCGTCATGGTTTTAGTTGA 58.514 42.857 5.58 0.00 0.00 3.18
5494 6549 2.873472 ACGCGTCATGGTTTTAGTTGAA 59.127 40.909 5.58 0.00 0.00 2.69
5495 6550 3.223157 CGCGTCATGGTTTTAGTTGAAC 58.777 45.455 0.00 0.00 0.00 3.18
5496 6551 3.059188 CGCGTCATGGTTTTAGTTGAACT 60.059 43.478 2.37 2.37 0.00 3.01
5497 6552 4.150980 CGCGTCATGGTTTTAGTTGAACTA 59.849 41.667 0.00 0.00 0.00 2.24
5498 6553 5.333492 CGCGTCATGGTTTTAGTTGAACTAA 60.333 40.000 13.39 13.39 38.79 2.24
5499 6554 6.432107 GCGTCATGGTTTTAGTTGAACTAAA 58.568 36.000 22.62 22.62 45.78 1.85
5508 6563 5.640218 TTAGTTGAACTAAAACCACGACG 57.360 39.130 14.88 0.00 37.71 5.12
5509 6564 3.784338 AGTTGAACTAAAACCACGACGA 58.216 40.909 0.00 0.00 0.00 4.20
5510 6565 3.800506 AGTTGAACTAAAACCACGACGAG 59.199 43.478 0.00 0.00 0.00 4.18
5511 6566 3.441496 TGAACTAAAACCACGACGAGT 57.559 42.857 0.00 0.00 0.00 4.18
5512 6567 4.566545 TGAACTAAAACCACGACGAGTA 57.433 40.909 0.00 0.00 0.00 2.59
5513 6568 4.930963 TGAACTAAAACCACGACGAGTAA 58.069 39.130 0.00 0.00 0.00 2.24
5514 6569 5.531634 TGAACTAAAACCACGACGAGTAAT 58.468 37.500 0.00 0.00 0.00 1.89
5515 6570 5.984926 TGAACTAAAACCACGACGAGTAATT 59.015 36.000 0.00 1.08 0.00 1.40
5516 6571 6.479660 TGAACTAAAACCACGACGAGTAATTT 59.520 34.615 0.00 0.34 0.00 1.82
5517 6572 6.219302 ACTAAAACCACGACGAGTAATTTG 57.781 37.500 0.00 2.39 0.00 2.32
5518 6573 4.477302 AAAACCACGACGAGTAATTTGG 57.523 40.909 0.00 0.00 0.00 3.28
5519 6574 3.389925 AACCACGACGAGTAATTTGGA 57.610 42.857 0.00 0.00 0.00 3.53
5520 6575 3.389925 ACCACGACGAGTAATTTGGAA 57.610 42.857 0.00 0.00 0.00 3.53
5521 6576 3.062042 ACCACGACGAGTAATTTGGAAC 58.938 45.455 0.00 0.00 0.00 3.62
5522 6577 2.091588 CCACGACGAGTAATTTGGAACG 59.908 50.000 0.00 0.00 0.00 3.95
5523 6578 2.091588 CACGACGAGTAATTTGGAACGG 59.908 50.000 0.00 0.00 0.00 4.44
5524 6579 2.030007 ACGACGAGTAATTTGGAACGGA 60.030 45.455 0.00 0.00 0.00 4.69
5525 6580 2.597305 CGACGAGTAATTTGGAACGGAG 59.403 50.000 0.00 0.00 0.00 4.63
5526 6581 2.928116 GACGAGTAATTTGGAACGGAGG 59.072 50.000 0.00 0.00 0.00 4.30
5527 6582 2.277084 CGAGTAATTTGGAACGGAGGG 58.723 52.381 0.00 0.00 0.00 4.30
5528 6583 2.093869 CGAGTAATTTGGAACGGAGGGA 60.094 50.000 0.00 0.00 0.00 4.20
5529 6584 3.532542 GAGTAATTTGGAACGGAGGGAG 58.467 50.000 0.00 0.00 0.00 4.30
5530 6585 2.910977 AGTAATTTGGAACGGAGGGAGT 59.089 45.455 0.00 0.00 0.00 3.85
5531 6586 4.098894 AGTAATTTGGAACGGAGGGAGTA 58.901 43.478 0.00 0.00 0.00 2.59
5532 6587 4.720273 AGTAATTTGGAACGGAGGGAGTAT 59.280 41.667 0.00 0.00 0.00 2.12
5552 6607 7.216973 AGTATATGTAAAAGCTACTCCCTCG 57.783 40.000 0.00 0.00 0.00 4.63
5565 6620 5.394333 GCTACTCCCTCGGATCCATATTAAC 60.394 48.000 13.41 0.00 0.00 2.01
5567 6622 5.900437 ACTCCCTCGGATCCATATTAACTA 58.100 41.667 13.41 0.00 0.00 2.24
5568 6623 5.715753 ACTCCCTCGGATCCATATTAACTAC 59.284 44.000 13.41 0.00 0.00 2.73
5622 6677 5.955488 TCTGAAGTAGTTGCTCTGTATGTC 58.045 41.667 0.00 0.00 0.00 3.06
5636 6695 6.342338 TCTGTATGTCATGGAGATGATCTG 57.658 41.667 0.00 0.00 40.78 2.90
5637 6696 5.837438 TCTGTATGTCATGGAGATGATCTGT 59.163 40.000 0.00 0.00 40.78 3.41
5638 6697 6.015603 TCTGTATGTCATGGAGATGATCTGTC 60.016 42.308 0.00 0.00 40.78 3.51
5639 6698 5.837438 TGTATGTCATGGAGATGATCTGTCT 59.163 40.000 0.00 0.00 40.78 3.41
5650 6709 8.148999 TGGAGATGATCTGTCTATCATTTTCAG 58.851 37.037 0.00 0.00 44.69 3.02
5754 6813 8.749841 ATATATCTTGCGCTAGTTAGTTTGAG 57.250 34.615 18.20 0.00 0.00 3.02
5758 6818 2.280628 GCGCTAGTTAGTTTGAGCCAT 58.719 47.619 0.00 0.00 0.00 4.40
5779 6839 9.512748 AGCCATACATAAATATAGAATCTCCCT 57.487 33.333 0.00 0.00 0.00 4.20
5869 6930 1.144936 GCATCTGACTCCTTCCCCG 59.855 63.158 0.00 0.00 0.00 5.73
6022 7083 9.458374 AAATTTGTATTAAACCGACTTCTTGTG 57.542 29.630 0.00 0.00 0.00 3.33
6191 7252 4.401925 AGAAGCCTGCAAACAAGATTAGT 58.598 39.130 0.00 0.00 0.00 2.24
6195 7256 4.938226 AGCCTGCAAACAAGATTAGTAGAC 59.062 41.667 0.00 0.00 0.00 2.59
6197 7258 5.163814 GCCTGCAAACAAGATTAGTAGACAG 60.164 44.000 0.00 0.00 0.00 3.51
6221 7282 4.785453 CCCCCTGGCAGCTCGAAC 62.785 72.222 9.56 0.00 0.00 3.95
6333 7394 2.126734 GTGGACCGTCACGTACCG 60.127 66.667 0.00 0.00 0.00 4.02
6431 7492 1.546998 GGTGGTAAACAGGGGGAAGTG 60.547 57.143 0.00 0.00 0.00 3.16
6471 7532 1.208052 CATCGAACATGACTCCTGGGT 59.792 52.381 0.00 0.00 0.00 4.51
6506 7567 1.207089 TCCTGCATGAAAGTCTACCCG 59.793 52.381 0.00 0.00 0.00 5.28
6523 7584 1.663739 CGGTGGACTTGGACGAAGA 59.336 57.895 4.01 0.00 35.42 2.87
6533 7594 1.878953 TGGACGAAGAAGTTGAAGGC 58.121 50.000 0.00 0.00 0.00 4.35
6554 7615 4.482431 ACCTTAGAGGGGCAGGTC 57.518 61.111 0.00 0.00 40.58 3.85
6557 7618 1.294068 ACCTTAGAGGGGCAGGTCATA 59.706 52.381 0.00 0.00 40.58 2.15
6576 7637 6.634805 GTCATAGACCTCAAGAATCTTGTCA 58.365 40.000 20.91 3.76 0.00 3.58
6618 7694 4.682563 TGGTCCACCCAAATACATGAATT 58.317 39.130 0.00 0.00 41.50 2.17
6625 7701 5.577945 CACCCAAATACATGAATTGCAAGAC 59.422 40.000 4.94 1.83 0.00 3.01
6626 7702 4.799949 CCCAAATACATGAATTGCAAGACG 59.200 41.667 4.94 0.00 0.00 4.18
6678 7754 1.846007 AGCATCTGAGGTCTCGAGTT 58.154 50.000 13.13 0.00 0.00 3.01
6679 7755 1.476085 AGCATCTGAGGTCTCGAGTTG 59.524 52.381 13.13 0.57 0.00 3.16
6681 7757 2.423892 GCATCTGAGGTCTCGAGTTGTA 59.576 50.000 13.13 0.00 0.00 2.41
6703 7779 3.456277 ACTCAGGAAGAAGAACACAACCT 59.544 43.478 0.00 0.00 0.00 3.50
6705 7781 4.957296 TCAGGAAGAAGAACACAACCTAC 58.043 43.478 0.00 0.00 0.00 3.18
6712 7788 4.335594 AGAAGAACACAACCTACAAAGCAC 59.664 41.667 0.00 0.00 0.00 4.40
6717 7793 0.385974 CAACCTACAAAGCACGCTGC 60.386 55.000 0.00 2.28 45.46 5.25
6719 7795 1.965930 CCTACAAAGCACGCTGCCA 60.966 57.895 6.39 0.00 46.52 4.92
6722 7798 4.688419 CAAAGCACGCTGCCACCG 62.688 66.667 6.39 0.00 46.52 4.94
6724 7800 4.927782 AAGCACGCTGCCACCGAA 62.928 61.111 6.39 0.00 46.52 4.30
6731 7807 2.186826 GCTGCCACCGAACACAACT 61.187 57.895 0.00 0.00 0.00 3.16
6746 7822 3.118261 ACACAACTCCTGAAGCTCTGAAA 60.118 43.478 0.00 0.00 0.00 2.69
6782 7858 1.874345 AAGTCTACCCGCTGGACACG 61.874 60.000 0.00 0.00 32.72 4.49
6830 7909 2.328099 GCTTCCCAGCGTGGAGTTG 61.328 63.158 5.71 0.00 40.96 3.16
6860 7939 1.528776 GGGAGACGCCTACGAGGAT 60.529 63.158 5.24 0.00 43.93 3.24
6866 7945 0.739561 ACGCCTACGAGGATCTGTTC 59.260 55.000 5.24 0.00 43.93 3.18
6873 7952 1.038130 CGAGGATCTGTTCGGGGACT 61.038 60.000 0.00 0.00 33.39 3.85
6894 7973 1.530013 GAACCCCGACGACTTCCTCA 61.530 60.000 0.00 0.00 0.00 3.86
6902 7981 2.317684 GACGACTTCCTCAACTTCGAC 58.682 52.381 0.00 0.00 33.87 4.20
6907 7986 2.698797 ACTTCCTCAACTTCGACCTTGA 59.301 45.455 4.34 4.34 0.00 3.02
6911 7990 2.035961 CCTCAACTTCGACCTTGAGACA 59.964 50.000 23.86 0.00 44.22 3.41
7096 8215 2.033372 TCCCATGTAGCATTGGCATTG 58.967 47.619 5.04 5.04 44.61 2.82
7209 8329 2.638480 TGTTTGCTGCTCCTTGTAGT 57.362 45.000 0.00 0.00 0.00 2.73
7216 8336 2.462456 TGCTCCTTGTAGTTGCAGAG 57.538 50.000 0.00 0.00 0.00 3.35
7226 8346 3.753272 TGTAGTTGCAGAGATTTTGAGGC 59.247 43.478 0.00 0.00 0.00 4.70
7269 8389 0.666274 TGTCAAGCAAGCGGTAGTCG 60.666 55.000 0.00 0.00 42.76 4.18
7277 8397 0.956633 AAGCGGTAGTCGTGAACTGA 59.043 50.000 0.00 0.00 39.11 3.41
7281 8401 1.068472 CGGTAGTCGTGAACTGAAGCT 60.068 52.381 0.00 0.00 39.11 3.74
7284 8404 0.753262 AGTCGTGAACTGAAGCTGGT 59.247 50.000 0.00 0.00 36.65 4.00
7301 8421 1.826096 TGGTGGTCGGTTTATCGATCA 59.174 47.619 0.00 0.00 46.38 2.92
7323 8443 5.239744 TCATAGTTGTGTGTAAAATGCCGTT 59.760 36.000 0.00 0.00 0.00 4.44
7324 8444 3.701241 AGTTGTGTGTAAAATGCCGTTG 58.299 40.909 0.00 0.00 0.00 4.10
7331 8451 3.060607 GTGTAAAATGCCGTTGTGCAAAG 60.061 43.478 0.00 0.00 45.84 2.77
7338 8458 1.299316 CGTTGTGCAAAGGCTGTGG 60.299 57.895 6.84 0.00 41.91 4.17
7370 8490 4.637091 ATGAACGCATCATCAATCTGTTGA 59.363 37.500 0.00 0.00 45.91 3.18
7372 8492 7.307573 TATGAACGCATCATCAATCTGTTGATC 60.308 37.037 7.50 0.00 45.91 2.92
7388 8508 8.151141 TCTGTTGATCATCAGAGATATTTTGC 57.849 34.615 25.79 0.00 36.04 3.68
7403 8525 6.863126 AGATATTTTGCTTTCTTTGTTCACCG 59.137 34.615 0.00 0.00 0.00 4.94
7441 8563 3.634397 TGCATAGCCTTAACTGAAGCT 57.366 42.857 0.00 0.00 33.36 3.74
7444 8566 3.488216 GCATAGCCTTAACTGAAGCTTGC 60.488 47.826 2.10 0.00 33.36 4.01
7448 8570 2.751806 GCCTTAACTGAAGCTTGCTCAT 59.248 45.455 2.10 0.00 33.36 2.90
7452 8574 1.451067 ACTGAAGCTTGCTCATGCTC 58.549 50.000 2.10 5.80 40.38 4.26
7460 8582 1.898330 TTGCTCATGCTCCGCTGGTA 61.898 55.000 0.00 0.00 40.48 3.25
7461 8583 1.153369 GCTCATGCTCCGCTGGTAA 60.153 57.895 0.00 0.00 36.03 2.85
7464 8586 1.524621 CATGCTCCGCTGGTAAGGG 60.525 63.158 0.00 0.00 36.14 3.95
7497 8642 2.038659 TGCAGGTAAAAGCTTTGCCTT 58.961 42.857 24.69 9.10 33.98 4.35
7506 8651 4.525912 AAAGCTTTGCCTTGTCCATTAG 57.474 40.909 11.80 0.00 0.00 1.73
7515 8662 6.166984 TGCCTTGTCCATTAGATAAGAGAG 57.833 41.667 1.28 0.00 44.29 3.20
7558 8711 0.662619 AATACACGGCATGCGGATTG 59.337 50.000 29.51 20.33 0.00 2.67
7643 8798 6.052360 GGTAGAGATGGAGGAAAACAAGATC 58.948 44.000 0.00 0.00 0.00 2.75
7682 8853 4.155449 TGCGTTTTGCTCGTTTCATATTC 58.845 39.130 0.00 0.00 46.63 1.75
7696 8868 6.536582 CGTTTCATATTCTCCATGAGACAAGT 59.463 38.462 0.00 0.00 38.51 3.16
7704 8876 6.990908 TCTCCATGAGACAAGTATGATGAT 57.009 37.500 0.00 0.00 33.35 2.45
7716 8888 1.229131 ATGATGATGGAGGCCTTGGT 58.771 50.000 6.77 0.00 0.00 3.67
7740 8913 3.587933 GTTTGGCGTGCCGTTGGA 61.588 61.111 6.37 0.00 39.42 3.53
7820 8994 2.104963 AGCCCGAGTATGAGGAATTTCC 59.895 50.000 7.39 7.39 36.58 3.13
7821 8995 2.755650 CCCGAGTATGAGGAATTTCCG 58.244 52.381 9.77 0.00 42.75 4.30
7828 9002 6.240549 AGTATGAGGAATTTCCGAATGACT 57.759 37.500 9.77 8.14 42.75 3.41
7866 9041 1.134788 GGTGTAGCGGCACTTGTAGAT 60.135 52.381 1.45 0.00 39.21 1.98
7867 9042 2.100252 GGTGTAGCGGCACTTGTAGATA 59.900 50.000 1.45 0.00 39.21 1.98
7879 9054 6.014669 GGCACTTGTAGATAAGATGAGATCCT 60.015 42.308 0.00 0.00 0.00 3.24
7918 9094 2.031120 CAAAGAGGGCAAAGACCACAA 58.969 47.619 0.00 0.00 29.21 3.33
7938 9114 2.632602 TTTGCCCACCCTCGCTTTGA 62.633 55.000 0.00 0.00 0.00 2.69
7952 9128 1.604278 GCTTTGACAATCTATCCGCCC 59.396 52.381 0.00 0.00 0.00 6.13
7953 9129 2.917933 CTTTGACAATCTATCCGCCCA 58.082 47.619 0.00 0.00 0.00 5.36
7955 9131 1.496060 TGACAATCTATCCGCCCACT 58.504 50.000 0.00 0.00 0.00 4.00
7974 9150 6.064717 CCCACTAAATTCTATCTTGAAGGGG 58.935 44.000 0.00 0.00 0.00 4.79
7976 9152 6.360618 CACTAAATTCTATCTTGAAGGGGCT 58.639 40.000 0.00 0.00 0.00 5.19
8090 9276 3.578456 CGGATGCCGCCCAATATC 58.422 61.111 0.00 0.00 41.17 1.63
8091 9277 1.302431 CGGATGCCGCCCAATATCA 60.302 57.895 0.00 0.00 41.17 2.15
8097 9283 1.531748 CCGCCCAATATCACCCACT 59.468 57.895 0.00 0.00 0.00 4.00
8099 9285 1.142060 CCGCCCAATATCACCCACTAA 59.858 52.381 0.00 0.00 0.00 2.24
8102 9288 3.421844 GCCCAATATCACCCACTAATCC 58.578 50.000 0.00 0.00 0.00 3.01
8104 9290 4.288626 GCCCAATATCACCCACTAATCCTA 59.711 45.833 0.00 0.00 0.00 2.94
8110 9296 9.354673 CAATATCACCCACTAATCCTATGTTTT 57.645 33.333 0.00 0.00 0.00 2.43
8111 9297 9.936329 AATATCACCCACTAATCCTATGTTTTT 57.064 29.630 0.00 0.00 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.049149 AGGACGAACAACAATCATACCATAG 58.951 40.000 0.00 0.00 0.00 2.23
2 3 4.843728 AGGACGAACAACAATCATACCAT 58.156 39.130 0.00 0.00 0.00 3.55
4 5 4.266976 CGTAGGACGAACAACAATCATACC 59.733 45.833 0.00 0.00 46.05 2.73
5 6 5.371344 CGTAGGACGAACAACAATCATAC 57.629 43.478 0.00 0.00 46.05 2.39
27 28 8.854117 TCTATATAAACCGGAGAGTTTTAGTCC 58.146 37.037 9.46 0.00 40.38 3.85
28 29 9.676195 GTCTATATAAACCGGAGAGTTTTAGTC 57.324 37.037 9.46 0.00 40.38 2.59
29 30 9.193806 TGTCTATATAAACCGGAGAGTTTTAGT 57.806 33.333 9.46 0.00 40.38 2.24
30 31 9.460906 GTGTCTATATAAACCGGAGAGTTTTAG 57.539 37.037 9.46 1.01 40.38 1.85
31 32 8.416329 GGTGTCTATATAAACCGGAGAGTTTTA 58.584 37.037 9.46 1.94 40.38 1.52
32 33 7.270779 GGTGTCTATATAAACCGGAGAGTTTT 58.729 38.462 9.46 0.00 40.38 2.43
33 34 6.814043 GGTGTCTATATAAACCGGAGAGTTT 58.186 40.000 9.46 0.00 42.47 2.66
34 35 6.402456 GGTGTCTATATAAACCGGAGAGTT 57.598 41.667 9.46 0.00 0.00 3.01
42 43 4.220163 CCCTCTCCGGTGTCTATATAAACC 59.780 50.000 0.00 0.68 0.00 3.27
43 44 4.321824 GCCCTCTCCGGTGTCTATATAAAC 60.322 50.000 0.00 0.00 0.00 2.01
44 45 3.830755 GCCCTCTCCGGTGTCTATATAAA 59.169 47.826 0.00 0.00 0.00 1.40
45 46 3.428532 GCCCTCTCCGGTGTCTATATAA 58.571 50.000 0.00 0.00 0.00 0.98
46 47 2.617276 CGCCCTCTCCGGTGTCTATATA 60.617 54.545 0.00 0.00 0.00 0.86
47 48 1.887088 CGCCCTCTCCGGTGTCTATAT 60.887 57.143 0.00 0.00 0.00 0.86
48 49 0.536687 CGCCCTCTCCGGTGTCTATA 60.537 60.000 0.00 0.00 0.00 1.31
49 50 1.828660 CGCCCTCTCCGGTGTCTAT 60.829 63.158 0.00 0.00 0.00 1.98
50 51 2.439701 CGCCCTCTCCGGTGTCTA 60.440 66.667 0.00 0.00 0.00 2.59
51 52 4.680537 ACGCCCTCTCCGGTGTCT 62.681 66.667 0.00 0.00 43.19 3.41
57 58 3.136123 TAACCGACGCCCTCTCCG 61.136 66.667 0.00 0.00 0.00 4.63
58 59 1.880819 TTGTAACCGACGCCCTCTCC 61.881 60.000 0.00 0.00 0.00 3.71
59 60 0.175073 ATTGTAACCGACGCCCTCTC 59.825 55.000 0.00 0.00 0.00 3.20
60 61 0.108329 CATTGTAACCGACGCCCTCT 60.108 55.000 0.00 0.00 0.00 3.69
61 62 1.087771 CCATTGTAACCGACGCCCTC 61.088 60.000 0.00 0.00 0.00 4.30
62 63 1.078708 CCATTGTAACCGACGCCCT 60.079 57.895 0.00 0.00 0.00 5.19
63 64 2.110352 CCCATTGTAACCGACGCCC 61.110 63.158 0.00 0.00 0.00 6.13
64 65 1.078988 TCCCATTGTAACCGACGCC 60.079 57.895 0.00 0.00 0.00 5.68
65 66 1.087771 CCTCCCATTGTAACCGACGC 61.088 60.000 0.00 0.00 0.00 5.19
66 67 0.533491 TCCTCCCATTGTAACCGACG 59.467 55.000 0.00 0.00 0.00 5.12
67 68 1.829222 TCTCCTCCCATTGTAACCGAC 59.171 52.381 0.00 0.00 0.00 4.79
68 69 2.241281 TCTCCTCCCATTGTAACCGA 57.759 50.000 0.00 0.00 0.00 4.69
69 70 2.700897 AGATCTCCTCCCATTGTAACCG 59.299 50.000 0.00 0.00 0.00 4.44
70 71 4.164221 TGAAGATCTCCTCCCATTGTAACC 59.836 45.833 0.00 0.00 0.00 2.85
71 72 5.359194 TGAAGATCTCCTCCCATTGTAAC 57.641 43.478 0.00 0.00 0.00 2.50
72 73 7.310052 CGATATGAAGATCTCCTCCCATTGTAA 60.310 40.741 0.00 0.00 0.00 2.41
73 74 6.153510 CGATATGAAGATCTCCTCCCATTGTA 59.846 42.308 0.00 0.00 0.00 2.41
74 75 5.046735 CGATATGAAGATCTCCTCCCATTGT 60.047 44.000 0.00 0.00 0.00 2.71
75 76 5.046735 ACGATATGAAGATCTCCTCCCATTG 60.047 44.000 0.00 0.00 0.00 2.82
76 77 5.090139 ACGATATGAAGATCTCCTCCCATT 58.910 41.667 0.00 0.00 0.00 3.16
77 78 4.682563 ACGATATGAAGATCTCCTCCCAT 58.317 43.478 0.00 0.00 0.00 4.00
78 79 4.119556 ACGATATGAAGATCTCCTCCCA 57.880 45.455 0.00 0.00 0.00 4.37
79 80 5.008217 CGATACGATATGAAGATCTCCTCCC 59.992 48.000 0.00 0.00 0.00 4.30
80 81 5.504994 GCGATACGATATGAAGATCTCCTCC 60.505 48.000 0.00 0.00 0.00 4.30
81 82 5.504994 GGCGATACGATATGAAGATCTCCTC 60.505 48.000 0.00 0.00 0.00 3.71
82 83 4.336993 GGCGATACGATATGAAGATCTCCT 59.663 45.833 0.00 0.00 0.00 3.69
83 84 4.096532 TGGCGATACGATATGAAGATCTCC 59.903 45.833 0.00 0.00 0.00 3.71
84 85 5.236655 TGGCGATACGATATGAAGATCTC 57.763 43.478 0.00 0.00 0.00 2.75
85 86 5.644977 TTGGCGATACGATATGAAGATCT 57.355 39.130 0.00 0.00 0.00 2.75
86 87 4.266502 GCTTGGCGATACGATATGAAGATC 59.733 45.833 0.00 0.00 0.00 2.75
87 88 4.081972 AGCTTGGCGATACGATATGAAGAT 60.082 41.667 0.00 0.00 0.00 2.40
88 89 3.255888 AGCTTGGCGATACGATATGAAGA 59.744 43.478 0.00 0.00 0.00 2.87
89 90 3.579709 AGCTTGGCGATACGATATGAAG 58.420 45.455 0.00 0.00 0.00 3.02
90 91 3.660501 AGCTTGGCGATACGATATGAA 57.339 42.857 0.00 0.00 0.00 2.57
91 92 3.317150 CAAGCTTGGCGATACGATATGA 58.683 45.455 19.14 0.00 0.00 2.15
92 93 2.159787 GCAAGCTTGGCGATACGATATG 60.160 50.000 27.10 0.00 0.00 1.78
93 94 2.069273 GCAAGCTTGGCGATACGATAT 58.931 47.619 27.10 0.00 0.00 1.63
94 95 1.497991 GCAAGCTTGGCGATACGATA 58.502 50.000 27.10 0.00 0.00 2.92
95 96 1.160329 GGCAAGCTTGGCGATACGAT 61.160 55.000 33.68 0.00 43.97 3.73
96 97 1.813753 GGCAAGCTTGGCGATACGA 60.814 57.895 33.68 0.00 43.97 3.43
97 98 2.709475 GGCAAGCTTGGCGATACG 59.291 61.111 33.68 4.49 43.97 3.06
104 105 2.956987 CGTGGAAGGCAAGCTTGG 59.043 61.111 27.10 9.80 0.00 3.61
113 114 0.537371 ACTTTCCTTGGCGTGGAAGG 60.537 55.000 15.33 15.33 43.48 3.46
114 115 0.875059 GACTTTCCTTGGCGTGGAAG 59.125 55.000 10.20 8.04 43.48 3.46
115 116 0.536460 GGACTTTCCTTGGCGTGGAA 60.536 55.000 6.88 6.88 41.33 3.53
116 117 1.072505 GGACTTTCCTTGGCGTGGA 59.927 57.895 0.00 0.00 32.53 4.02
117 118 1.971695 GGGACTTTCCTTGGCGTGG 60.972 63.158 0.00 0.00 36.57 4.94
118 119 0.609131 ATGGGACTTTCCTTGGCGTG 60.609 55.000 0.00 0.00 36.57 5.34
119 120 0.322546 GATGGGACTTTCCTTGGCGT 60.323 55.000 0.00 0.00 36.57 5.68
120 121 1.032114 GGATGGGACTTTCCTTGGCG 61.032 60.000 0.00 0.00 36.57 5.69
121 122 1.032114 CGGATGGGACTTTCCTTGGC 61.032 60.000 0.00 0.00 36.57 4.52
122 123 0.394352 CCGGATGGGACTTTCCTTGG 60.394 60.000 0.00 0.00 38.47 3.61
123 124 0.618458 TCCGGATGGGACTTTCCTTG 59.382 55.000 0.00 0.00 40.94 3.61
124 125 3.098445 TCCGGATGGGACTTTCCTT 57.902 52.632 0.00 0.00 40.94 3.36
125 126 4.910613 TCCGGATGGGACTTTCCT 57.089 55.556 0.00 0.00 40.94 3.36
139 140 4.112341 GACTCCGTCCCGTGTCCG 62.112 72.222 0.00 0.00 0.00 4.79
140 141 2.210341 GAAGACTCCGTCCCGTGTCC 62.210 65.000 0.00 0.00 32.18 4.02
141 142 1.212229 GAAGACTCCGTCCCGTGTC 59.788 63.158 0.00 0.00 32.18 3.67
142 143 1.111116 TTGAAGACTCCGTCCCGTGT 61.111 55.000 0.00 0.00 32.18 4.49
143 144 0.246635 ATTGAAGACTCCGTCCCGTG 59.753 55.000 0.00 0.00 32.18 4.94
144 145 0.531200 GATTGAAGACTCCGTCCCGT 59.469 55.000 0.00 0.00 32.18 5.28
145 146 0.818296 AGATTGAAGACTCCGTCCCG 59.182 55.000 0.00 0.00 32.18 5.14
146 147 2.028020 ACAAGATTGAAGACTCCGTCCC 60.028 50.000 0.00 0.00 32.18 4.46
147 148 3.320673 ACAAGATTGAAGACTCCGTCC 57.679 47.619 0.00 0.00 32.18 4.79
148 149 5.897050 AGATACAAGATTGAAGACTCCGTC 58.103 41.667 0.00 0.00 0.00 4.79
149 150 5.923733 AGATACAAGATTGAAGACTCCGT 57.076 39.130 0.00 0.00 0.00 4.69
150 151 6.333416 TGAAGATACAAGATTGAAGACTCCG 58.667 40.000 0.00 0.00 0.00 4.63
151 152 9.474920 CTATGAAGATACAAGATTGAAGACTCC 57.525 37.037 0.00 0.00 0.00 3.85
154 155 9.255304 GGACTATGAAGATACAAGATTGAAGAC 57.745 37.037 0.00 0.00 0.00 3.01
155 156 8.138074 CGGACTATGAAGATACAAGATTGAAGA 58.862 37.037 0.00 0.00 0.00 2.87
156 157 7.383572 CCGGACTATGAAGATACAAGATTGAAG 59.616 40.741 0.00 0.00 0.00 3.02
157 158 7.210174 CCGGACTATGAAGATACAAGATTGAA 58.790 38.462 0.00 0.00 0.00 2.69
158 159 6.239317 CCCGGACTATGAAGATACAAGATTGA 60.239 42.308 0.73 0.00 0.00 2.57
159 160 5.928839 CCCGGACTATGAAGATACAAGATTG 59.071 44.000 0.73 0.00 0.00 2.67
160 161 5.839063 TCCCGGACTATGAAGATACAAGATT 59.161 40.000 0.73 0.00 0.00 2.40
161 162 5.394738 TCCCGGACTATGAAGATACAAGAT 58.605 41.667 0.73 0.00 0.00 2.40
162 163 4.800023 TCCCGGACTATGAAGATACAAGA 58.200 43.478 0.73 0.00 0.00 3.02
163 164 4.585162 ACTCCCGGACTATGAAGATACAAG 59.415 45.833 0.73 0.00 0.00 3.16
164 165 4.543689 ACTCCCGGACTATGAAGATACAA 58.456 43.478 0.73 0.00 0.00 2.41
165 166 4.142790 GACTCCCGGACTATGAAGATACA 58.857 47.826 0.73 0.00 0.00 2.29
166 167 3.506844 GGACTCCCGGACTATGAAGATAC 59.493 52.174 0.73 0.00 0.00 2.24
167 168 3.764218 GGACTCCCGGACTATGAAGATA 58.236 50.000 0.73 0.00 0.00 1.98
168 169 2.599677 GGACTCCCGGACTATGAAGAT 58.400 52.381 0.73 0.00 0.00 2.40
169 170 2.068834 GGACTCCCGGACTATGAAGA 57.931 55.000 0.73 0.00 0.00 2.87
181 182 3.623703 GACCTTTGGCCGGACTCCC 62.624 68.421 9.82 0.00 0.00 4.30
182 183 2.046217 GACCTTTGGCCGGACTCC 60.046 66.667 9.82 0.00 0.00 3.85
183 184 0.539986 TATGACCTTTGGCCGGACTC 59.460 55.000 9.82 0.00 0.00 3.36
184 185 0.541863 CTATGACCTTTGGCCGGACT 59.458 55.000 9.82 0.00 0.00 3.85
185 186 0.252197 ACTATGACCTTTGGCCGGAC 59.748 55.000 5.05 0.56 0.00 4.79
186 187 0.539986 GACTATGACCTTTGGCCGGA 59.460 55.000 5.05 0.00 0.00 5.14
187 188 0.463833 GGACTATGACCTTTGGCCGG 60.464 60.000 0.00 0.00 0.00 6.13
188 189 0.251916 TGGACTATGACCTTTGGCCG 59.748 55.000 0.00 0.00 0.00 6.13
189 190 2.019156 GCTGGACTATGACCTTTGGCC 61.019 57.143 0.00 0.00 0.00 5.36
190 191 1.383523 GCTGGACTATGACCTTTGGC 58.616 55.000 0.00 0.00 0.00 4.52
191 192 1.281867 TGGCTGGACTATGACCTTTGG 59.718 52.381 0.00 0.00 0.00 3.28
192 193 2.636830 CTGGCTGGACTATGACCTTTG 58.363 52.381 0.00 0.00 0.00 2.77
193 194 1.065126 GCTGGCTGGACTATGACCTTT 60.065 52.381 0.00 0.00 0.00 3.11
194 195 0.543749 GCTGGCTGGACTATGACCTT 59.456 55.000 0.00 0.00 0.00 3.50
195 196 1.341156 GGCTGGCTGGACTATGACCT 61.341 60.000 0.00 0.00 0.00 3.85
196 197 1.147153 GGCTGGCTGGACTATGACC 59.853 63.158 0.00 0.00 0.00 4.02
197 198 1.227380 CGGCTGGCTGGACTATGAC 60.227 63.158 0.00 0.00 0.00 3.06
198 199 2.434843 CCGGCTGGCTGGACTATGA 61.435 63.158 14.76 0.00 45.10 2.15
199 200 2.109799 CCGGCTGGCTGGACTATG 59.890 66.667 14.76 0.00 45.10 2.23
200 201 2.041922 TCCGGCTGGCTGGACTAT 60.042 61.111 18.10 0.00 45.79 2.12
210 211 2.325393 GATTAGGGGGTGTCCGGCTG 62.325 65.000 0.00 0.00 36.01 4.85
211 212 2.042261 ATTAGGGGGTGTCCGGCT 59.958 61.111 0.00 0.00 36.01 5.52
212 213 2.509422 GATTAGGGGGTGTCCGGC 59.491 66.667 0.00 0.00 36.01 6.13
213 214 1.691337 TGGATTAGGGGGTGTCCGG 60.691 63.158 0.00 0.00 36.01 5.14
214 215 1.696097 CCTGGATTAGGGGGTGTCCG 61.696 65.000 0.00 0.00 43.33 4.79
215 216 2.231642 CCTGGATTAGGGGGTGTCC 58.768 63.158 0.00 0.00 43.33 4.02
223 224 2.324541 CAGAGGGAGTCCTGGATTAGG 58.675 57.143 9.58 0.00 45.05 2.69
224 225 2.962421 GACAGAGGGAGTCCTGGATTAG 59.038 54.545 9.58 0.00 45.05 1.73
225 226 2.314852 TGACAGAGGGAGTCCTGGATTA 59.685 50.000 9.58 0.00 45.05 1.75
226 227 1.079490 TGACAGAGGGAGTCCTGGATT 59.921 52.381 9.58 0.00 45.05 3.01
227 228 0.712979 TGACAGAGGGAGTCCTGGAT 59.287 55.000 9.58 0.00 45.05 3.41
228 229 0.251832 GTGACAGAGGGAGTCCTGGA 60.252 60.000 9.58 0.00 45.05 3.86
229 230 1.261238 GGTGACAGAGGGAGTCCTGG 61.261 65.000 9.58 0.00 45.05 4.45
230 231 0.542938 TGGTGACAGAGGGAGTCCTG 60.543 60.000 9.58 1.89 38.62 3.86
231 232 0.191064 TTGGTGACAGAGGGAGTCCT 59.809 55.000 9.58 0.00 44.54 3.85
232 233 1.056660 TTTGGTGACAGAGGGAGTCC 58.943 55.000 0.00 0.00 44.54 3.85
233 234 1.694696 AGTTTGGTGACAGAGGGAGTC 59.305 52.381 0.00 0.00 44.54 3.36
234 235 1.807814 AGTTTGGTGACAGAGGGAGT 58.192 50.000 0.00 0.00 44.54 3.85
235 236 2.370189 AGAAGTTTGGTGACAGAGGGAG 59.630 50.000 0.00 0.00 44.54 4.30
236 237 2.408565 AGAAGTTTGGTGACAGAGGGA 58.591 47.619 0.00 0.00 44.54 4.20
237 238 2.880890 CAAGAAGTTTGGTGACAGAGGG 59.119 50.000 0.00 0.00 44.54 4.30
238 239 3.313526 CACAAGAAGTTTGGTGACAGAGG 59.686 47.826 0.00 0.00 44.54 3.69
239 240 3.242870 GCACAAGAAGTTTGGTGACAGAG 60.243 47.826 0.00 0.00 44.54 3.35
240 241 2.682856 GCACAAGAAGTTTGGTGACAGA 59.317 45.455 0.00 0.00 44.54 3.41
241 242 2.684881 AGCACAAGAAGTTTGGTGACAG 59.315 45.455 0.00 0.00 44.54 3.51
242 243 2.722094 AGCACAAGAAGTTTGGTGACA 58.278 42.857 0.00 0.00 39.83 3.58
243 244 3.489229 GGAAGCACAAGAAGTTTGGTGAC 60.489 47.826 0.00 0.00 33.16 3.67
276 277 3.591695 TTATATGACATGCAGGGCCAA 57.408 42.857 6.18 0.00 0.00 4.52
443 444 6.734137 TCACTGTTTGTTGGTGATTGAATAC 58.266 36.000 0.00 0.00 35.44 1.89
597 599 0.966179 GGGTTTGCCGGAATTCTGTT 59.034 50.000 5.05 0.00 34.97 3.16
600 602 0.178947 TTGGGGTTTGCCGGAATTCT 60.179 50.000 5.05 0.00 34.97 2.40
692 695 4.304110 TCACAGACAACACGGAGTATTTC 58.696 43.478 0.00 0.00 41.61 2.17
850 853 0.538118 GGTACGGAATGTGGGTAGCA 59.462 55.000 0.00 0.00 35.38 3.49
1059 1063 3.146104 CCATTTGGTGAGAGTGGAAGT 57.854 47.619 0.00 0.00 31.59 3.01
1156 1160 2.345991 GCGGAGGCTGGTGTACAA 59.654 61.111 0.00 0.00 35.83 2.41
1187 1191 2.450886 AGAAACCAGTTGAGGGGGAAAT 59.549 45.455 0.00 0.00 0.00 2.17
1203 1208 6.988522 AGTAGAGACTCCAAGAAGAAGAAAC 58.011 40.000 0.00 0.00 0.00 2.78
1242 1247 1.016653 GGAGAGCGAGCAACTTGACC 61.017 60.000 0.00 0.00 0.00 4.02
1372 1377 4.504858 GTCTTGATAGGTCACGTGGAATT 58.495 43.478 17.00 1.91 33.11 2.17
1373 1378 3.118738 GGTCTTGATAGGTCACGTGGAAT 60.119 47.826 17.00 4.17 33.11 3.01
1392 1397 0.315251 GGCTGGTTTTGCAAGAGGTC 59.685 55.000 0.00 0.00 0.00 3.85
1505 1510 3.551635 AGAAGAGGAGGTGGAGAAAGA 57.448 47.619 0.00 0.00 0.00 2.52
1661 1666 1.059584 TGCCCAGAACCAGGAGAACA 61.060 55.000 0.00 0.00 0.00 3.18
1689 1694 1.003839 GGTCGTCTGGGTCATGCAA 60.004 57.895 0.00 0.00 0.00 4.08
1705 1710 4.759693 TCGTATTTCTGCTTTTCATGTGGT 59.240 37.500 0.00 0.00 0.00 4.16
1764 1769 2.762535 GGAATCGTCCAGAACCAAGA 57.237 50.000 0.00 0.00 44.26 3.02
1776 1781 0.038166 ATGGGTGCAGTTGGAATCGT 59.962 50.000 0.00 0.00 0.00 3.73
1852 1858 0.321210 TCGATTCGAAGGGCTTTGCA 60.321 50.000 6.24 0.00 31.06 4.08
1974 1981 6.327365 ACCCTCTGATTGGAAGTTTGAAAAAT 59.673 34.615 0.85 0.00 0.00 1.82
2055 2062 0.467474 TCGCATCTACGGAGGTGGAT 60.467 55.000 10.64 0.00 44.23 3.41
2243 2250 4.570874 GGATGAAGGAGCGCCCCC 62.571 72.222 3.45 6.29 34.66 5.40
2244 2251 2.949705 GAAGGATGAAGGAGCGCCCC 62.950 65.000 2.29 0.00 34.66 5.80
2245 2252 1.524849 GAAGGATGAAGGAGCGCCC 60.525 63.158 2.29 5.07 33.31 6.13
2246 2253 0.813210 CAGAAGGATGAAGGAGCGCC 60.813 60.000 2.29 0.00 0.00 6.53
2247 2254 0.176680 TCAGAAGGATGAAGGAGCGC 59.823 55.000 0.00 0.00 0.00 5.92
2262 2269 0.543277 GCTGGTGGTGGATGATCAGA 59.457 55.000 0.09 0.00 0.00 3.27
2381 2391 3.468140 GGGGCGGTGTCTAGGGTC 61.468 72.222 0.00 0.00 0.00 4.46
2591 2608 3.914426 ATTGCTCTTTACTCGGACCAT 57.086 42.857 0.00 0.00 0.00 3.55
2594 2611 5.815740 TCCATAAATTGCTCTTTACTCGGAC 59.184 40.000 0.00 0.00 0.00 4.79
2595 2612 5.984725 TCCATAAATTGCTCTTTACTCGGA 58.015 37.500 0.00 0.00 0.00 4.55
2596 2613 5.817816 ACTCCATAAATTGCTCTTTACTCGG 59.182 40.000 0.00 0.00 0.00 4.63
2597 2614 6.910536 ACTCCATAAATTGCTCTTTACTCG 57.089 37.500 0.00 0.00 0.00 4.18
2598 2615 8.951243 AGAAACTCCATAAATTGCTCTTTACTC 58.049 33.333 0.00 0.00 0.00 2.59
2599 2616 8.870075 AGAAACTCCATAAATTGCTCTTTACT 57.130 30.769 0.00 0.00 0.00 2.24
2604 2621 9.566432 CCTATAAGAAACTCCATAAATTGCTCT 57.434 33.333 0.00 0.00 0.00 4.09
2605 2622 9.343539 ACCTATAAGAAACTCCATAAATTGCTC 57.656 33.333 0.00 0.00 0.00 4.26
2606 2623 9.125026 CACCTATAAGAAACTCCATAAATTGCT 57.875 33.333 0.00 0.00 0.00 3.91
2607 2624 9.120538 TCACCTATAAGAAACTCCATAAATTGC 57.879 33.333 0.00 0.00 0.00 3.56
2618 2635 7.190501 AGGGTTAGAGTCACCTATAAGAAACT 58.809 38.462 0.06 0.00 34.36 2.66
2718 2746 1.099295 GGTTTTTATCCGGCGGAGGG 61.099 60.000 33.82 4.41 34.05 4.30
2725 2753 2.225382 AAGGTGGGGTTTTTATCCGG 57.775 50.000 0.00 0.00 0.00 5.14
3406 3479 4.154347 CACCGGAGAGGAGCTGGC 62.154 72.222 9.46 0.00 45.00 4.85
3479 3582 4.619227 AACAGGGGACGCACGGTG 62.619 66.667 3.15 3.15 0.00 4.94
3496 3599 0.541764 AATCTGCAGGCGGGGAAAAA 60.542 50.000 15.13 0.00 0.00 1.94
3502 3605 0.392998 AGTTGTAATCTGCAGGCGGG 60.393 55.000 15.13 0.00 0.00 6.13
3507 3610 3.076621 TCCAGCAAGTTGTAATCTGCAG 58.923 45.455 7.63 7.63 0.00 4.41
3573 3676 2.431942 CGTAGTTGCGCCCGAAGT 60.432 61.111 4.18 0.00 0.00 3.01
3694 3833 2.692368 TCCCTCCTGGTCATGCCC 60.692 66.667 0.00 0.00 36.04 5.36
3724 3863 1.105167 TATACCTCCTGTCGTGCCGG 61.105 60.000 0.00 0.00 0.00 6.13
3799 3938 9.467258 CATTGACACAAAATCAACTTCAGTAAT 57.533 29.630 0.00 0.00 38.84 1.89
3800 3939 7.920151 CCATTGACACAAAATCAACTTCAGTAA 59.080 33.333 0.00 0.00 38.84 2.24
3802 3941 6.275335 CCATTGACACAAAATCAACTTCAGT 58.725 36.000 0.00 0.00 38.84 3.41
3803 3942 5.176223 GCCATTGACACAAAATCAACTTCAG 59.824 40.000 0.00 0.00 38.84 3.02
3825 3983 5.948992 ATCTTCAGTTTCAGTTAACAGCC 57.051 39.130 8.61 0.00 0.00 4.85
3826 3984 7.385205 TCAGTATCTTCAGTTTCAGTTAACAGC 59.615 37.037 8.61 0.00 0.00 4.40
3832 3990 9.832445 TTACTTTCAGTATCTTCAGTTTCAGTT 57.168 29.630 0.00 0.00 29.64 3.16
3865 4024 5.736951 AGAGCATTTCACTTCTCTACAGT 57.263 39.130 0.00 0.00 34.45 3.55
3897 4056 7.809806 GCAAAGCAATAACTCAAACACTCTTAT 59.190 33.333 0.00 0.00 0.00 1.73
3898 4057 7.138736 GCAAAGCAATAACTCAAACACTCTTA 58.861 34.615 0.00 0.00 0.00 2.10
3899 4058 5.979517 GCAAAGCAATAACTCAAACACTCTT 59.020 36.000 0.00 0.00 0.00 2.85
3900 4059 5.507985 GGCAAAGCAATAACTCAAACACTCT 60.508 40.000 0.00 0.00 0.00 3.24
3901 4060 4.681483 GGCAAAGCAATAACTCAAACACTC 59.319 41.667 0.00 0.00 0.00 3.51
3902 4061 4.342092 AGGCAAAGCAATAACTCAAACACT 59.658 37.500 0.00 0.00 0.00 3.55
3914 4073 7.880160 TTACTGAATACATAGGCAAAGCAAT 57.120 32.000 0.00 0.00 0.00 3.56
3945 4104 9.440761 ACTCTTATATTTATTCACAGAGGGAGT 57.559 33.333 0.00 0.00 32.21 3.85
3946 4105 9.703892 CACTCTTATATTTATTCACAGAGGGAG 57.296 37.037 0.00 0.00 32.92 4.30
3948 4107 9.838339 AACACTCTTATATTTATTCACAGAGGG 57.162 33.333 0.00 0.00 36.55 4.30
3987 4314 9.485206 AGAGCGTTTAGAACTTTAAATCACTAA 57.515 29.630 0.00 0.00 0.00 2.24
3988 4315 9.485206 AAGAGCGTTTAGAACTTTAAATCACTA 57.515 29.630 0.00 0.00 0.00 2.74
3989 4316 7.964604 AGAGCGTTTAGAACTTTAAATCACT 57.035 32.000 0.00 0.00 0.00 3.41
4001 4328 9.661187 CGTAAAGAGATATAAGAGCGTTTAGAA 57.339 33.333 0.00 0.00 0.00 2.10
4002 4329 9.049523 TCGTAAAGAGATATAAGAGCGTTTAGA 57.950 33.333 0.00 0.00 0.00 2.10
4003 4330 9.828852 ATCGTAAAGAGATATAAGAGCGTTTAG 57.171 33.333 0.00 0.00 0.00 1.85
4016 4343 9.333724 GGACCCAAATTTAATCGTAAAGAGATA 57.666 33.333 0.00 0.00 32.76 1.98
4017 4344 8.053355 AGGACCCAAATTTAATCGTAAAGAGAT 58.947 33.333 0.00 0.00 32.76 2.75
4018 4345 7.335924 CAGGACCCAAATTTAATCGTAAAGAGA 59.664 37.037 0.00 0.00 32.76 3.10
4020 4347 6.376018 CCAGGACCCAAATTTAATCGTAAAGA 59.624 38.462 0.00 0.00 32.76 2.52
4022 4349 6.011481 ACCAGGACCCAAATTTAATCGTAAA 58.989 36.000 0.00 0.00 33.76 2.01
4023 4350 5.416326 CACCAGGACCCAAATTTAATCGTAA 59.584 40.000 0.00 0.00 0.00 3.18
4024 4351 4.944930 CACCAGGACCCAAATTTAATCGTA 59.055 41.667 0.00 0.00 0.00 3.43
4025 4352 3.761752 CACCAGGACCCAAATTTAATCGT 59.238 43.478 0.00 0.00 0.00 3.73
4026 4353 4.013728 TCACCAGGACCCAAATTTAATCG 58.986 43.478 0.00 0.00 0.00 3.34
4027 4354 7.839680 ATATCACCAGGACCCAAATTTAATC 57.160 36.000 0.00 0.00 0.00 1.75
4112 4819 7.792032 AGACATAGGAGGATTTCGTTTAATCA 58.208 34.615 0.00 0.00 36.46 2.57
4125 4832 7.127493 TGTCTTCTAGTTCTAGACATAGGAGGA 59.873 40.741 14.68 4.97 42.31 3.71
4126 4833 7.284074 TGTCTTCTAGTTCTAGACATAGGAGG 58.716 42.308 14.68 3.21 42.31 4.30
4153 4860 3.351740 TCTGCATCCTAATTTTCGGCAA 58.648 40.909 0.00 0.00 0.00 4.52
4155 4862 3.793465 GCTTCTGCATCCTAATTTTCGGC 60.793 47.826 0.00 0.00 39.41 5.54
4156 4863 3.629398 AGCTTCTGCATCCTAATTTTCGG 59.371 43.478 0.00 0.00 42.74 4.30
4157 4864 4.889832 AGCTTCTGCATCCTAATTTTCG 57.110 40.909 0.00 0.00 42.74 3.46
4170 4877 1.939255 GTGCATCCTTCTAGCTTCTGC 59.061 52.381 0.00 0.00 40.05 4.26
4229 4936 9.666626 GTTCTTTAGTTTCTCTTTTAAGGAAGC 57.333 33.333 0.00 0.00 0.00 3.86
4269 4976 3.293311 CCGAAGGTTGTTTCGTCTCTA 57.707 47.619 7.29 0.00 46.31 2.43
4296 5003 2.680221 GCATCAGCCTCAGTCAACAGAT 60.680 50.000 0.00 0.00 33.58 2.90
4297 5004 1.338484 GCATCAGCCTCAGTCAACAGA 60.338 52.381 0.00 0.00 33.58 3.41
4317 5044 1.142748 GTCGCCTCCTCATGGTCTG 59.857 63.158 0.00 0.00 34.23 3.51
4318 5045 2.418910 CGTCGCCTCCTCATGGTCT 61.419 63.158 0.00 0.00 34.23 3.85
4319 5046 2.105128 CGTCGCCTCCTCATGGTC 59.895 66.667 0.00 0.00 34.23 4.02
4320 5047 4.148825 GCGTCGCCTCCTCATGGT 62.149 66.667 5.75 0.00 34.23 3.55
4321 5048 3.376935 AAGCGTCGCCTCCTCATGG 62.377 63.158 14.86 0.00 0.00 3.66
4322 5049 2.169789 CAAGCGTCGCCTCCTCATG 61.170 63.158 14.86 0.00 0.00 3.07
4323 5050 2.185350 CAAGCGTCGCCTCCTCAT 59.815 61.111 14.86 0.00 0.00 2.90
4324 5051 4.069232 CCAAGCGTCGCCTCCTCA 62.069 66.667 14.86 0.00 0.00 3.86
4325 5052 2.962697 GATCCAAGCGTCGCCTCCTC 62.963 65.000 14.86 1.11 0.00 3.71
4326 5053 3.077556 ATCCAAGCGTCGCCTCCT 61.078 61.111 14.86 0.00 0.00 3.69
4327 5054 2.586357 GATCCAAGCGTCGCCTCC 60.586 66.667 14.86 0.00 0.00 4.30
4328 5055 1.590259 GAGATCCAAGCGTCGCCTC 60.590 63.158 14.86 8.36 0.00 4.70
4329 5056 2.055042 AGAGATCCAAGCGTCGCCT 61.055 57.895 14.86 1.86 0.00 5.52
4330 5057 1.880340 CAGAGATCCAAGCGTCGCC 60.880 63.158 14.86 0.00 0.00 5.54
4331 5058 1.880340 CCAGAGATCCAAGCGTCGC 60.880 63.158 9.80 9.80 0.00 5.19
4332 5059 0.108615 AACCAGAGATCCAAGCGTCG 60.109 55.000 0.00 0.00 0.00 5.12
4333 5060 2.166664 AGTAACCAGAGATCCAAGCGTC 59.833 50.000 0.00 0.00 0.00 5.19
4334 5061 2.166664 GAGTAACCAGAGATCCAAGCGT 59.833 50.000 0.00 0.00 0.00 5.07
4335 5062 2.428890 AGAGTAACCAGAGATCCAAGCG 59.571 50.000 0.00 0.00 0.00 4.68
4336 5063 3.196685 ACAGAGTAACCAGAGATCCAAGC 59.803 47.826 0.00 0.00 0.00 4.01
4342 5069 2.234908 GTGGCACAGAGTAACCAGAGAT 59.765 50.000 13.86 0.00 41.80 2.75
4349 5076 1.993370 GTGATCGTGGCACAGAGTAAC 59.007 52.381 19.09 10.99 41.80 2.50
4352 5079 2.049435 TGTGATCGTGGCACAGAGT 58.951 52.632 19.09 0.00 41.80 3.24
4366 5093 0.394192 CTTGGTCTGTGCCTCTGTGA 59.606 55.000 0.00 0.00 0.00 3.58
4369 5096 0.954449 CTGCTTGGTCTGTGCCTCTG 60.954 60.000 0.00 0.00 0.00 3.35
4370 5097 1.374190 CTGCTTGGTCTGTGCCTCT 59.626 57.895 0.00 0.00 0.00 3.69
4371 5098 2.331132 GCTGCTTGGTCTGTGCCTC 61.331 63.158 0.00 0.00 0.00 4.70
4372 5099 2.282040 GCTGCTTGGTCTGTGCCT 60.282 61.111 0.00 0.00 0.00 4.75
4373 5100 3.730761 CGCTGCTTGGTCTGTGCC 61.731 66.667 0.00 0.00 0.00 5.01
4374 5101 1.785041 TTTCGCTGCTTGGTCTGTGC 61.785 55.000 0.00 0.00 0.00 4.57
4375 5102 0.040958 GTTTCGCTGCTTGGTCTGTG 60.041 55.000 0.00 0.00 0.00 3.66
4376 5103 0.463654 TGTTTCGCTGCTTGGTCTGT 60.464 50.000 0.00 0.00 0.00 3.41
4419 5146 4.946160 TTTACATCCAATCCACCCTTCT 57.054 40.909 0.00 0.00 0.00 2.85
4426 5153 7.206789 TCCTACTGATTTTACATCCAATCCA 57.793 36.000 0.00 0.00 0.00 3.41
4433 5160 5.593095 GGGGGTTTCCTACTGATTTTACATC 59.407 44.000 0.00 0.00 35.33 3.06
4453 5180 6.549364 TCAACTGCAACATATAAATTAGGGGG 59.451 38.462 0.00 0.00 0.00 5.40
4480 5207 2.433446 CAGTGGGCTGCAGGTTCT 59.567 61.111 17.12 0.00 35.77 3.01
4531 5258 2.158460 TGCTCTATTCTCCTCCGATGGA 60.158 50.000 0.00 0.00 34.52 3.41
4616 5343 3.997064 CTTGACTCGCCCCAGCTCG 62.997 68.421 0.00 0.00 36.60 5.03
4647 5374 0.168788 AGCGCATCAAATTCCACACG 59.831 50.000 11.47 0.00 0.00 4.49
4649 5376 3.016031 ACATAGCGCATCAAATTCCACA 58.984 40.909 11.47 0.00 0.00 4.17
4650 5377 3.698029 ACATAGCGCATCAAATTCCAC 57.302 42.857 11.47 0.00 0.00 4.02
4675 5402 0.383949 GCAGGAGAACTCTAGAGGCG 59.616 60.000 23.50 0.00 0.00 5.52
4720 5447 2.912956 TGGCCCAACTATTGTCTCTTCT 59.087 45.455 0.00 0.00 0.00 2.85
4721 5448 3.350219 TGGCCCAACTATTGTCTCTTC 57.650 47.619 0.00 0.00 0.00 2.87
4722 5449 3.624777 CATGGCCCAACTATTGTCTCTT 58.375 45.455 0.00 0.00 0.00 2.85
4892 5623 2.033141 TGGAGAAGCTGTGCAGGC 59.967 61.111 3.65 3.65 0.00 4.85
4895 5626 1.168407 GCAACTGGAGAAGCTGTGCA 61.168 55.000 0.00 0.00 0.00 4.57
4896 5627 1.168407 TGCAACTGGAGAAGCTGTGC 61.168 55.000 0.00 0.00 0.00 4.57
4919 5972 0.111832 ATGCAGGCCCATACATCCAG 59.888 55.000 0.00 0.00 0.00 3.86
5039 6094 2.823959 ACCATGGAATCATGCAAAGGT 58.176 42.857 21.47 0.00 47.00 3.50
5121 6176 1.960689 ACAGTGGTTGTGTTATTGCCC 59.039 47.619 0.00 0.00 38.99 5.36
5249 6304 2.789323 TAAGGAGGGGGAGTGATACC 57.211 55.000 0.00 0.00 0.00 2.73
5438 6493 6.015010 CGGAGGGAGTATATCTTGTCATCTTT 60.015 42.308 0.00 0.00 0.00 2.52
5446 6501 3.895656 TGGAACGGAGGGAGTATATCTTG 59.104 47.826 0.00 0.00 0.00 3.02
5456 6511 1.676615 GCGTAATTTGGAACGGAGGGA 60.677 52.381 1.07 0.00 39.46 4.20
5457 6512 0.730840 GCGTAATTTGGAACGGAGGG 59.269 55.000 1.07 0.00 39.46 4.30
5458 6513 0.372334 CGCGTAATTTGGAACGGAGG 59.628 55.000 0.00 0.00 39.46 4.30
5459 6514 1.060122 GACGCGTAATTTGGAACGGAG 59.940 52.381 13.97 0.00 39.46 4.63
5460 6515 1.070038 GACGCGTAATTTGGAACGGA 58.930 50.000 13.97 0.00 39.46 4.69
5461 6516 0.791422 TGACGCGTAATTTGGAACGG 59.209 50.000 13.97 0.00 39.46 4.44
5462 6517 2.427169 CATGACGCGTAATTTGGAACG 58.573 47.619 13.97 0.00 41.92 3.95
5463 6518 2.160813 ACCATGACGCGTAATTTGGAAC 59.839 45.455 26.33 8.64 0.00 3.62
5464 6519 2.428491 ACCATGACGCGTAATTTGGAA 58.572 42.857 26.33 3.76 0.00 3.53
5465 6520 2.102070 ACCATGACGCGTAATTTGGA 57.898 45.000 26.33 3.46 0.00 3.53
5466 6521 2.911819 AACCATGACGCGTAATTTGG 57.088 45.000 13.97 18.71 0.00 3.28
5467 6522 5.387279 ACTAAAACCATGACGCGTAATTTG 58.613 37.500 13.97 6.53 0.00 2.32
5468 6523 5.616488 ACTAAAACCATGACGCGTAATTT 57.384 34.783 13.97 4.78 0.00 1.82
5469 6524 5.179742 TCAACTAAAACCATGACGCGTAATT 59.820 36.000 13.97 0.00 0.00 1.40
5470 6525 4.691685 TCAACTAAAACCATGACGCGTAAT 59.308 37.500 13.97 7.83 0.00 1.89
5471 6526 4.056740 TCAACTAAAACCATGACGCGTAA 58.943 39.130 13.97 4.60 0.00 3.18
5472 6527 3.651206 TCAACTAAAACCATGACGCGTA 58.349 40.909 13.97 0.41 0.00 4.42
5473 6528 2.485903 TCAACTAAAACCATGACGCGT 58.514 42.857 13.85 13.85 0.00 6.01
5474 6529 3.059188 AGTTCAACTAAAACCATGACGCG 60.059 43.478 3.53 3.53 0.00 6.01
5475 6530 4.483476 AGTTCAACTAAAACCATGACGC 57.517 40.909 0.00 0.00 0.00 5.19
5485 6540 5.809562 TCGTCGTGGTTTTAGTTCAACTAAA 59.190 36.000 17.26 17.26 45.78 1.85
5486 6541 5.347342 TCGTCGTGGTTTTAGTTCAACTAA 58.653 37.500 5.86 5.86 38.79 2.24
5487 6542 4.930963 TCGTCGTGGTTTTAGTTCAACTA 58.069 39.130 0.00 0.00 0.00 2.24
5488 6543 3.784338 TCGTCGTGGTTTTAGTTCAACT 58.216 40.909 0.00 0.00 0.00 3.16
5489 6544 3.553105 ACTCGTCGTGGTTTTAGTTCAAC 59.447 43.478 0.00 0.00 0.00 3.18
5490 6545 3.784338 ACTCGTCGTGGTTTTAGTTCAA 58.216 40.909 0.00 0.00 0.00 2.69
5491 6546 3.441496 ACTCGTCGTGGTTTTAGTTCA 57.559 42.857 0.00 0.00 0.00 3.18
5492 6547 6.457851 AATTACTCGTCGTGGTTTTAGTTC 57.542 37.500 0.00 0.00 0.00 3.01
5493 6548 6.293027 CCAAATTACTCGTCGTGGTTTTAGTT 60.293 38.462 0.00 0.00 0.00 2.24
5494 6549 5.178067 CCAAATTACTCGTCGTGGTTTTAGT 59.822 40.000 0.00 0.00 0.00 2.24
5495 6550 5.406175 TCCAAATTACTCGTCGTGGTTTTAG 59.594 40.000 0.00 0.00 0.00 1.85
5496 6551 5.295950 TCCAAATTACTCGTCGTGGTTTTA 58.704 37.500 0.00 0.00 0.00 1.52
5497 6552 4.128643 TCCAAATTACTCGTCGTGGTTTT 58.871 39.130 0.00 0.00 0.00 2.43
5498 6553 3.731089 TCCAAATTACTCGTCGTGGTTT 58.269 40.909 0.00 0.00 0.00 3.27
5499 6554 3.389925 TCCAAATTACTCGTCGTGGTT 57.610 42.857 0.00 0.00 0.00 3.67
5500 6555 3.062042 GTTCCAAATTACTCGTCGTGGT 58.938 45.455 0.00 0.00 0.00 4.16
5501 6556 2.091588 CGTTCCAAATTACTCGTCGTGG 59.908 50.000 0.00 0.00 0.00 4.94
5502 6557 2.091588 CCGTTCCAAATTACTCGTCGTG 59.908 50.000 0.00 0.00 0.00 4.35
5503 6558 2.030007 TCCGTTCCAAATTACTCGTCGT 60.030 45.455 0.00 0.00 0.00 4.34
5504 6559 2.597305 CTCCGTTCCAAATTACTCGTCG 59.403 50.000 0.00 0.00 0.00 5.12
5505 6560 2.928116 CCTCCGTTCCAAATTACTCGTC 59.072 50.000 0.00 0.00 0.00 4.20
5506 6561 2.354403 CCCTCCGTTCCAAATTACTCGT 60.354 50.000 0.00 0.00 0.00 4.18
5507 6562 2.093869 TCCCTCCGTTCCAAATTACTCG 60.094 50.000 0.00 0.00 0.00 4.18
5508 6563 3.055312 ACTCCCTCCGTTCCAAATTACTC 60.055 47.826 0.00 0.00 0.00 2.59
5509 6564 2.910977 ACTCCCTCCGTTCCAAATTACT 59.089 45.455 0.00 0.00 0.00 2.24
5510 6565 3.345508 ACTCCCTCCGTTCCAAATTAC 57.654 47.619 0.00 0.00 0.00 1.89
5511 6566 6.328148 ACATATACTCCCTCCGTTCCAAATTA 59.672 38.462 0.00 0.00 0.00 1.40
5512 6567 5.132144 ACATATACTCCCTCCGTTCCAAATT 59.868 40.000 0.00 0.00 0.00 1.82
5513 6568 4.658901 ACATATACTCCCTCCGTTCCAAAT 59.341 41.667 0.00 0.00 0.00 2.32
5514 6569 4.035112 ACATATACTCCCTCCGTTCCAAA 58.965 43.478 0.00 0.00 0.00 3.28
5515 6570 3.649843 ACATATACTCCCTCCGTTCCAA 58.350 45.455 0.00 0.00 0.00 3.53
5516 6571 3.323774 ACATATACTCCCTCCGTTCCA 57.676 47.619 0.00 0.00 0.00 3.53
5517 6572 5.796424 TTTACATATACTCCCTCCGTTCC 57.204 43.478 0.00 0.00 0.00 3.62
5518 6573 5.695363 GCTTTTACATATACTCCCTCCGTTC 59.305 44.000 0.00 0.00 0.00 3.95
5519 6574 5.365895 AGCTTTTACATATACTCCCTCCGTT 59.634 40.000 0.00 0.00 0.00 4.44
5520 6575 4.900054 AGCTTTTACATATACTCCCTCCGT 59.100 41.667 0.00 0.00 0.00 4.69
5521 6576 5.470047 AGCTTTTACATATACTCCCTCCG 57.530 43.478 0.00 0.00 0.00 4.63
5522 6577 7.541916 AGTAGCTTTTACATATACTCCCTCC 57.458 40.000 0.00 0.00 0.00 4.30
5527 6582 7.306953 CGAGGGAGTAGCTTTTACATATACTC 58.693 42.308 0.00 0.00 40.93 2.59
5528 6583 6.208994 CCGAGGGAGTAGCTTTTACATATACT 59.791 42.308 0.00 0.00 0.00 2.12
5529 6584 6.208204 TCCGAGGGAGTAGCTTTTACATATAC 59.792 42.308 0.00 0.00 0.00 1.47
5530 6585 6.309357 TCCGAGGGAGTAGCTTTTACATATA 58.691 40.000 0.00 0.00 0.00 0.86
5531 6586 5.145564 TCCGAGGGAGTAGCTTTTACATAT 58.854 41.667 0.00 0.00 0.00 1.78
5532 6587 4.539726 TCCGAGGGAGTAGCTTTTACATA 58.460 43.478 0.00 0.00 0.00 2.29
5552 6607 5.401531 TCAGCGGTAGTTAATATGGATCC 57.598 43.478 4.20 4.20 0.00 3.36
5565 6620 5.892568 ACTCTTGTACTAAATCAGCGGTAG 58.107 41.667 0.00 0.00 0.00 3.18
5567 6622 4.803098 ACTCTTGTACTAAATCAGCGGT 57.197 40.909 0.00 0.00 0.00 5.68
5622 6677 8.850007 AAAATGATAGACAGATCATCTCCATG 57.150 34.615 2.95 0.00 44.15 3.66
5639 6698 9.942850 TGTGACATAAGAAGTCTGAAAATGATA 57.057 29.630 0.00 0.00 36.94 2.15
5661 6720 7.692460 AAGTGCAGAATCAGAAAATATGTGA 57.308 32.000 0.00 0.00 35.53 3.58
5735 6794 2.094417 GGCTCAAACTAACTAGCGCAAG 59.906 50.000 11.47 0.80 35.79 4.01
5776 6836 4.261909 GCATATGAGCATTGAAGGAAAGGG 60.262 45.833 6.97 0.00 0.00 3.95
5779 6839 4.539726 AGGCATATGAGCATTGAAGGAAA 58.460 39.130 6.97 0.00 35.83 3.13
5836 6897 5.936956 AGTCAGATGCTTTTCCAGTAAAGAG 59.063 40.000 0.00 0.00 37.31 2.85
5843 6904 3.347077 AGGAGTCAGATGCTTTTCCAG 57.653 47.619 0.00 0.00 0.00 3.86
5869 6930 3.139029 CGTAAGCTGGTCCTTCCAC 57.861 57.895 0.00 0.00 41.93 4.02
6010 7071 4.675114 GCAATGTTAAACACAAGAAGTCGG 59.325 41.667 0.00 0.00 39.50 4.79
6011 7072 5.396362 CAGCAATGTTAAACACAAGAAGTCG 59.604 40.000 0.00 0.00 39.50 4.18
6022 7083 9.463443 ACTTTGAATTCTACAGCAATGTTAAAC 57.537 29.630 7.05 0.00 0.00 2.01
6092 7153 1.065126 ACAATAAGAGTGCCCCTCAGC 60.065 52.381 3.62 0.00 43.12 4.26
6191 7252 2.365635 GGGGGCTGCTCCTGTCTA 60.366 66.667 19.75 0.00 34.39 2.59
6221 7282 3.025262 GCCTTCTATAGGGGGACTATCG 58.975 54.545 13.59 0.00 44.91 2.92
6227 7288 1.578703 TGAGTGCCTTCTATAGGGGGA 59.421 52.381 13.59 8.77 44.91 4.81
6333 7394 5.444663 ACCTTCACTTGAGAAAGATTTGC 57.555 39.130 0.00 0.00 0.00 3.68
6431 7492 3.216800 TGCCATCTTGCTATGTTGATCC 58.783 45.455 0.00 0.00 0.00 3.36
6471 7532 1.212935 GCAGGATTTAGCCTTGGGAGA 59.787 52.381 0.00 0.00 35.66 3.71
6506 7567 1.070289 ACTTCTTCGTCCAAGTCCACC 59.930 52.381 0.00 0.00 33.27 4.61
6533 7594 2.365105 TGCCCCTCTAAGGTCCCG 60.365 66.667 0.00 0.00 31.93 5.14
6554 7615 6.638610 AGTGACAAGATTCTTGAGGTCTATG 58.361 40.000 28.60 4.28 0.00 2.23
6557 7618 5.070981 TGAAGTGACAAGATTCTTGAGGTCT 59.929 40.000 28.60 17.85 0.00 3.85
6569 7630 2.027745 GCCAGGATCTGAAGTGACAAGA 60.028 50.000 0.00 0.00 32.44 3.02
6571 7632 1.699083 TGCCAGGATCTGAAGTGACAA 59.301 47.619 0.00 0.00 32.44 3.18
6574 7635 5.128205 CAATATTGCCAGGATCTGAAGTGA 58.872 41.667 1.74 0.00 32.44 3.41
6575 7636 4.277672 CCAATATTGCCAGGATCTGAAGTG 59.722 45.833 10.11 0.00 32.44 3.16
6576 7637 4.079558 ACCAATATTGCCAGGATCTGAAGT 60.080 41.667 10.11 0.00 32.44 3.01
6609 7670 5.185454 AGAATCCGTCTTGCAATTCATGTA 58.815 37.500 0.00 0.00 29.66 2.29
6611 7672 4.627611 AGAATCCGTCTTGCAATTCATG 57.372 40.909 0.00 0.00 29.66 3.07
6625 7701 2.266554 GAGACAGCACTGAAGAATCCG 58.733 52.381 4.31 0.00 0.00 4.18
6626 7702 2.626840 GGAGACAGCACTGAAGAATCC 58.373 52.381 4.31 0.94 0.00 3.01
6678 7754 5.357257 GTTGTGTTCTTCTTCCTGAGTACA 58.643 41.667 0.00 0.00 0.00 2.90
6679 7755 4.750598 GGTTGTGTTCTTCTTCCTGAGTAC 59.249 45.833 0.00 0.00 0.00 2.73
6681 7757 3.456277 AGGTTGTGTTCTTCTTCCTGAGT 59.544 43.478 0.00 0.00 0.00 3.41
6703 7779 2.258013 GGTGGCAGCGTGCTTTGTA 61.258 57.895 0.00 0.00 44.28 2.41
6705 7781 4.688419 CGGTGGCAGCGTGCTTTG 62.688 66.667 29.14 0.77 44.28 2.77
6712 7788 3.276091 TTGTGTTCGGTGGCAGCG 61.276 61.111 31.26 31.26 40.97 5.18
6717 7793 0.105964 TCAGGAGTTGTGTTCGGTGG 59.894 55.000 0.00 0.00 0.00 4.61
6719 7795 1.810412 GCTTCAGGAGTTGTGTTCGGT 60.810 52.381 0.00 0.00 0.00 4.69
6722 7798 2.805099 CAGAGCTTCAGGAGTTGTGTTC 59.195 50.000 0.00 0.00 0.00 3.18
6724 7800 2.042464 TCAGAGCTTCAGGAGTTGTGT 58.958 47.619 0.00 0.00 32.64 3.72
6746 7822 5.975693 AGACTTTCGTGAGAGATCTCTTT 57.024 39.130 25.81 5.36 43.25 2.52
6761 7837 0.606604 TGTCCAGCGGGTAGACTTTC 59.393 55.000 1.81 0.00 34.93 2.62
6815 7894 2.525629 TCCAACTCCACGCTGGGA 60.526 61.111 0.00 0.00 38.32 4.37
6830 7909 1.743321 CGTCTCCCATCTCCTGCTCC 61.743 65.000 0.00 0.00 0.00 4.70
6860 7939 0.395312 GGTTCAAGTCCCCGAACAGA 59.605 55.000 0.00 0.00 42.67 3.41
6873 7952 1.117142 AGGAAGTCGTCGGGGTTCAA 61.117 55.000 0.00 0.00 0.00 2.69
6894 7973 3.071023 TCCATTGTCTCAAGGTCGAAGTT 59.929 43.478 0.00 0.00 0.00 2.66
6902 7981 1.001974 TCCACGTCCATTGTCTCAAGG 59.998 52.381 0.00 0.00 0.00 3.61
6907 7986 1.183030 TCCGTCCACGTCCATTGTCT 61.183 55.000 0.00 0.00 37.74 3.41
6911 7990 0.101759 CGTATCCGTCCACGTCCATT 59.898 55.000 0.00 0.00 37.74 3.16
7011 8090 2.047179 GTTCCGAGCACCCAGGTC 60.047 66.667 0.00 0.00 41.32 3.85
7075 8171 1.991121 ATGCCAATGCTACATGGGAG 58.009 50.000 5.12 0.00 40.57 4.30
7077 8173 1.069513 CCAATGCCAATGCTACATGGG 59.930 52.381 0.00 0.00 37.19 4.00
7079 8175 3.243501 GGTACCAATGCCAATGCTACATG 60.244 47.826 7.15 0.00 38.71 3.21
7081 8177 2.291217 TGGTACCAATGCCAATGCTACA 60.291 45.455 13.60 0.00 37.71 2.74
7082 8178 2.099098 GTGGTACCAATGCCAATGCTAC 59.901 50.000 18.31 0.00 42.96 3.58
7209 8329 2.867624 ACAGCCTCAAAATCTCTGCAA 58.132 42.857 0.00 0.00 0.00 4.08
7216 8336 3.753272 TGCAGAGTTACAGCCTCAAAATC 59.247 43.478 0.00 0.00 0.00 2.17
7269 8389 1.230324 GACCACCAGCTTCAGTTCAC 58.770 55.000 0.00 0.00 0.00 3.18
7277 8397 1.674817 CGATAAACCGACCACCAGCTT 60.675 52.381 0.00 0.00 0.00 3.74
7281 8401 1.826096 TGATCGATAAACCGACCACCA 59.174 47.619 0.00 0.00 41.70 4.17
7284 8404 5.163488 ACAACTATGATCGATAAACCGACCA 60.163 40.000 0.00 0.00 41.70 4.02
7301 8421 5.009210 ACAACGGCATTTTACACACAACTAT 59.991 36.000 0.00 0.00 0.00 2.12
7302 8422 4.335874 ACAACGGCATTTTACACACAACTA 59.664 37.500 0.00 0.00 0.00 2.24
7323 8443 0.969917 AACACCACAGCCTTTGCACA 60.970 50.000 0.00 0.00 41.13 4.57
7324 8444 1.028905 TAACACCACAGCCTTTGCAC 58.971 50.000 0.00 0.00 41.13 4.57
7331 8451 3.555956 CGTTCATAGATAACACCACAGCC 59.444 47.826 0.00 0.00 0.00 4.85
7338 8458 6.769608 TGATGATGCGTTCATAGATAACAC 57.230 37.500 2.24 0.00 45.29 3.32
7372 8492 9.635520 AACAAAGAAAGCAAAATATCTCTGATG 57.364 29.630 0.00 0.00 0.00 3.07
7379 8499 6.640907 ACGGTGAACAAAGAAAGCAAAATATC 59.359 34.615 0.00 0.00 0.00 1.63
7381 8501 5.897050 ACGGTGAACAAAGAAAGCAAAATA 58.103 33.333 0.00 0.00 0.00 1.40
7384 8504 3.859411 ACGGTGAACAAAGAAAGCAAA 57.141 38.095 0.00 0.00 0.00 3.68
7386 8506 2.733858 GCAACGGTGAACAAAGAAAGCA 60.734 45.455 3.55 0.00 0.00 3.91
7387 8507 1.852280 GCAACGGTGAACAAAGAAAGC 59.148 47.619 3.55 0.00 0.00 3.51
7388 8508 3.108144 CAGCAACGGTGAACAAAGAAAG 58.892 45.455 3.55 0.00 32.22 2.62
7403 8525 1.843992 CAAACTGCAGGTTCAGCAAC 58.156 50.000 15.77 0.00 42.17 4.17
7479 8624 3.552890 GGACAAGGCAAAGCTTTTACCTG 60.553 47.826 24.57 20.31 0.00 4.00
7483 8628 4.953940 AATGGACAAGGCAAAGCTTTTA 57.046 36.364 9.53 0.00 0.00 1.52
7497 8642 9.702253 AAACTCTACTCTCTTATCTAATGGACA 57.298 33.333 0.00 0.00 0.00 4.02
7558 8711 4.254492 AGGGTCTTTTATTTCACGAGAGC 58.746 43.478 0.00 0.00 34.92 4.09
7636 8791 2.579201 CTCCACCGCCGATCTTGT 59.421 61.111 0.00 0.00 0.00 3.16
7643 8798 4.379243 AAGAGTGCTCCACCGCCG 62.379 66.667 0.00 0.00 34.49 6.46
7682 8853 5.932883 CCATCATCATACTTGTCTCATGGAG 59.067 44.000 0.00 0.00 31.56 3.86
7696 8868 2.421725 ACCAAGGCCTCCATCATCATA 58.578 47.619 5.23 0.00 0.00 2.15
7704 8876 1.228124 CGACAAACCAAGGCCTCCA 60.228 57.895 5.23 0.00 0.00 3.86
7716 8888 2.409651 GCACGCCAAACCGACAAA 59.590 55.556 0.00 0.00 0.00 2.83
7820 8994 3.181520 CGGCTTTGGTCTTTAGTCATTCG 60.182 47.826 0.00 0.00 0.00 3.34
7821 8995 3.751698 ACGGCTTTGGTCTTTAGTCATTC 59.248 43.478 0.00 0.00 0.00 2.67
7828 9002 0.320946 CCCGACGGCTTTGGTCTTTA 60.321 55.000 8.86 0.00 32.24 1.85
7918 9094 1.228862 AAAGCGAGGGTGGGCAAAT 60.229 52.632 0.00 0.00 0.00 2.32
7923 9099 0.609131 ATTGTCAAAGCGAGGGTGGG 60.609 55.000 0.00 0.00 0.00 4.61
7938 9114 4.706842 ATTTAGTGGGCGGATAGATTGT 57.293 40.909 0.00 0.00 0.00 2.71
7952 9128 6.360618 AGCCCCTTCAAGATAGAATTTAGTG 58.639 40.000 0.00 0.00 0.00 2.74
7953 9129 6.582929 AGCCCCTTCAAGATAGAATTTAGT 57.417 37.500 0.00 0.00 0.00 2.24
7955 9131 6.388689 TGGTAGCCCCTTCAAGATAGAATTTA 59.611 38.462 0.00 0.00 0.00 1.40
8084 9270 8.924511 AAACATAGGATTAGTGGGTGATATTG 57.075 34.615 0.00 0.00 0.00 1.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.