Multiple sequence alignment - TraesCS3B01G573200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G573200 chr3B 100.000 3642 0 0 1 3642 804114436 804118077 0.000000e+00 6726.0
1 TraesCS3B01G573200 chr3B 90.609 788 62 6 2198 2978 734998479 734999261 0.000000e+00 1035.0
2 TraesCS3B01G573200 chr3B 90.749 227 20 1 163 389 804125930 804126155 5.910000e-78 302.0
3 TraesCS3B01G573200 chr3B 89.444 180 11 3 1993 2165 734997354 734997532 1.700000e-53 220.0
4 TraesCS3B01G573200 chr3B 100.000 58 0 0 426 483 804114822 804114879 1.380000e-19 108.0
5 TraesCS3B01G573200 chr3B 100.000 58 0 0 387 444 804114861 804114918 1.380000e-19 108.0
6 TraesCS3B01G573200 chr3B 100.000 30 0 0 405 434 804123030 804123059 5.080000e-04 56.5
7 TraesCS3B01G573200 chr3B 100.000 30 0 0 444 473 804123030 804123059 5.080000e-04 56.5
8 TraesCS3B01G573200 chr1A 97.176 2656 56 4 987 3642 409857500 409854864 0.000000e+00 4471.0
9 TraesCS3B01G573200 chr1A 90.736 788 63 4 2198 2978 17870921 17871705 0.000000e+00 1042.0
10 TraesCS3B01G573200 chr1A 88.587 184 13 3 1993 2169 17869768 17869950 2.200000e-52 217.0
11 TraesCS3B01G573200 chr1A 89.873 79 6 2 1889 1966 12784209 12784286 2.310000e-17 100.0
12 TraesCS3B01G573200 chr3A 97.941 1894 30 4 1172 3060 567999081 568000970 0.000000e+00 3273.0
13 TraesCS3B01G573200 chr3A 91.530 791 48 7 2198 2978 94161761 94162542 0.000000e+00 1072.0
14 TraesCS3B01G573200 chr3A 96.533 548 19 0 3095 3642 568000971 568001518 0.000000e+00 907.0
15 TraesCS3B01G573200 chr3A 93.830 389 23 1 1 389 727387765 727388152 5.240000e-163 584.0
16 TraesCS3B01G573200 chr3A 88.889 180 12 3 1993 2165 94145649 94145827 7.920000e-52 215.0
17 TraesCS3B01G573200 chr3D 97.599 1458 33 2 2186 3642 571464230 571465686 0.000000e+00 2497.0
18 TraesCS3B01G573200 chr3D 95.892 998 36 2 1172 2164 571453847 571454844 0.000000e+00 1611.0
19 TraesCS3B01G573200 chr3D 97.814 869 15 2 2183 3051 579496006 579495142 0.000000e+00 1496.0
20 TraesCS3B01G573200 chr3D 97.843 510 11 0 3133 3642 579495143 579494634 0.000000e+00 881.0
21 TraesCS3B01G573200 chr3D 94.831 445 15 3 1 437 597290529 597290973 0.000000e+00 688.0
22 TraesCS3B01G573200 chr3D 89.401 217 14 4 2700 2908 75118709 75118494 7.750000e-67 265.0
23 TraesCS3B01G573200 chr3D 89.873 79 6 2 1889 1966 141455853 141455930 2.310000e-17 100.0
24 TraesCS3B01G573200 chr4D 96.453 1325 38 2 1172 2491 214994398 214995718 0.000000e+00 2178.0
25 TraesCS3B01G573200 chr4D 89.510 143 9 3 3163 3300 359683735 359683594 3.740000e-40 176.0
26 TraesCS3B01G573200 chr6B 96.794 1123 34 2 1021 2143 130110699 130111819 0.000000e+00 1873.0
27 TraesCS3B01G573200 chr6B 98.814 590 6 1 2506 3095 130111822 130112410 0.000000e+00 1050.0
28 TraesCS3B01G573200 chr6B 97.839 509 11 0 3134 3642 130112407 130112915 0.000000e+00 880.0
29 TraesCS3B01G573200 chr6B 96.660 479 13 3 481 957 130109946 130110423 0.000000e+00 793.0
30 TraesCS3B01G573200 chr6B 95.210 167 7 1 3323 3488 8401466 8401300 2.790000e-66 263.0
31 TraesCS3B01G573200 chr2B 97.176 850 24 0 979 1828 4570172 4569323 0.000000e+00 1437.0
32 TraesCS3B01G573200 chr2B 87.064 688 62 16 488 1173 633308937 633308275 0.000000e+00 752.0
33 TraesCS3B01G573200 chr2B 93.988 499 23 5 482 977 4571027 4570533 0.000000e+00 749.0
34 TraesCS3B01G573200 chr2B 96.809 94 0 2 3045 3138 782178753 782178843 1.750000e-33 154.0
35 TraesCS3B01G573200 chr2B 92.381 105 7 1 3039 3143 46846072 46846175 8.150000e-32 148.0
36 TraesCS3B01G573200 chr5D 91.497 788 57 5 2198 2978 539738175 539738959 0.000000e+00 1075.0
37 TraesCS3B01G573200 chr5D 89.444 180 11 3 1993 2165 539737020 539737198 1.700000e-53 220.0
38 TraesCS3B01G573200 chr5D 92.754 69 5 0 1898 1966 254356545 254356477 2.310000e-17 100.0
39 TraesCS3B01G573200 chr7B 95.633 458 19 1 1255 1711 88141425 88141882 0.000000e+00 734.0
40 TraesCS3B01G573200 chr7B 85.154 714 66 16 1174 1856 683925226 683925930 0.000000e+00 695.0
41 TraesCS3B01G573200 chr7B 91.200 125 11 0 1174 1298 683727248 683727372 1.740000e-38 171.0
42 TraesCS3B01G573200 chr7B 95.833 96 4 0 3043 3138 66196614 66196709 4.870000e-34 156.0
43 TraesCS3B01G573200 chr7B 96.774 93 2 1 3045 3137 598012026 598012117 1.750000e-33 154.0
44 TraesCS3B01G573200 chr4B 91.337 531 39 7 482 1009 350966871 350967397 0.000000e+00 719.0
45 TraesCS3B01G573200 chr4B 93.103 174 11 1 1000 1173 350967681 350967853 1.680000e-63 254.0
46 TraesCS3B01G573200 chr2A 93.578 436 24 3 1 434 605593239 605593672 0.000000e+00 647.0
47 TraesCS3B01G573200 chr2A 88.736 435 48 1 1 434 605657201 605656767 6.920000e-147 531.0
48 TraesCS3B01G573200 chr2A 98.765 81 1 0 1678 1758 67089617 67089537 1.050000e-30 145.0
49 TraesCS3B01G573200 chr7D 85.213 656 60 13 1217 1856 602913875 602914509 1.100000e-179 640.0
50 TraesCS3B01G573200 chr7D 89.706 204 16 5 2703 2903 468943571 468943370 4.670000e-64 255.0
51 TraesCS3B01G573200 chr7D 90.741 162 15 0 3481 3642 468942749 468942588 2.200000e-52 217.0
52 TraesCS3B01G573200 chr7D 97.778 90 1 1 3045 3134 506141365 506141453 1.750000e-33 154.0
53 TraesCS3B01G573200 chr5B 88.753 489 45 8 483 968 430205185 430205666 1.130000e-164 590.0
54 TraesCS3B01G573200 chr5B 88.753 489 45 8 483 968 430217915 430218396 1.130000e-164 590.0
55 TraesCS3B01G573200 chr5B 88.344 489 47 8 483 968 430108897 430109378 2.440000e-161 579.0
56 TraesCS3B01G573200 chr5B 94.949 99 4 1 3040 3137 317294229 317294327 1.750000e-33 154.0
57 TraesCS3B01G573200 chr1B 88.330 497 51 6 482 976 235514835 235514344 1.130000e-164 590.0
58 TraesCS3B01G573200 chr1B 94.857 175 7 2 3318 3490 450130948 450130774 4.630000e-69 272.0
59 TraesCS3B01G573200 chr1B 97.414 116 3 0 1056 1171 640703306 640703191 7.980000e-47 198.0
60 TraesCS3B01G573200 chrUn 88.057 494 49 8 479 968 254615465 254615952 8.770000e-161 577.0
61 TraesCS3B01G573200 chrUn 93.431 137 4 1 1042 1173 467269724 467269860 7.980000e-47 198.0
62 TraesCS3B01G573200 chr2D 87.218 266 25 4 914 1173 286018927 286019189 9.890000e-76 294.0
63 TraesCS3B01G573200 chr7A 93.642 173 11 0 3314 3486 105168187 105168359 3.610000e-65 259.0
64 TraesCS3B01G573200 chr6D 93.182 176 12 0 3309 3484 406204909 406204734 3.610000e-65 259.0
65 TraesCS3B01G573200 chr6D 92.754 69 5 0 1898 1966 450266293 450266225 2.310000e-17 100.0
66 TraesCS3B01G573200 chr5A 90.566 159 15 0 3484 3642 554993718 554993560 1.020000e-50 211.0
67 TraesCS3B01G573200 chr5A 90.566 159 15 0 3484 3642 555018192 555018034 1.020000e-50 211.0
68 TraesCS3B01G573200 chr5A 90.566 159 15 0 3484 3642 555029385 555029227 1.020000e-50 211.0
69 TraesCS3B01G573200 chr4A 81.992 261 19 15 917 1173 712707415 712707179 2.870000e-46 196.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G573200 chr3B 804114436 804118077 3641 False 2314.0 6726 100.00000 1 3642 3 chr3B.!!$F2 3641
1 TraesCS3B01G573200 chr3B 734997354 734999261 1907 False 627.5 1035 90.02650 1993 2978 2 chr3B.!!$F1 985
2 TraesCS3B01G573200 chr1A 409854864 409857500 2636 True 4471.0 4471 97.17600 987 3642 1 chr1A.!!$R1 2655
3 TraesCS3B01G573200 chr1A 17869768 17871705 1937 False 629.5 1042 89.66150 1993 2978 2 chr1A.!!$F2 985
4 TraesCS3B01G573200 chr3A 567999081 568001518 2437 False 2090.0 3273 97.23700 1172 3642 2 chr3A.!!$F4 2470
5 TraesCS3B01G573200 chr3A 94161761 94162542 781 False 1072.0 1072 91.53000 2198 2978 1 chr3A.!!$F2 780
6 TraesCS3B01G573200 chr3D 571464230 571465686 1456 False 2497.0 2497 97.59900 2186 3642 1 chr3D.!!$F3 1456
7 TraesCS3B01G573200 chr3D 571453847 571454844 997 False 1611.0 1611 95.89200 1172 2164 1 chr3D.!!$F2 992
8 TraesCS3B01G573200 chr3D 579494634 579496006 1372 True 1188.5 1496 97.82850 2183 3642 2 chr3D.!!$R2 1459
9 TraesCS3B01G573200 chr4D 214994398 214995718 1320 False 2178.0 2178 96.45300 1172 2491 1 chr4D.!!$F1 1319
10 TraesCS3B01G573200 chr6B 130109946 130112915 2969 False 1149.0 1873 97.52675 481 3642 4 chr6B.!!$F1 3161
11 TraesCS3B01G573200 chr2B 4569323 4571027 1704 True 1093.0 1437 95.58200 482 1828 2 chr2B.!!$R2 1346
12 TraesCS3B01G573200 chr2B 633308275 633308937 662 True 752.0 752 87.06400 488 1173 1 chr2B.!!$R1 685
13 TraesCS3B01G573200 chr5D 539737020 539738959 1939 False 647.5 1075 90.47050 1993 2978 2 chr5D.!!$F1 985
14 TraesCS3B01G573200 chr7B 683925226 683925930 704 False 695.0 695 85.15400 1174 1856 1 chr7B.!!$F5 682
15 TraesCS3B01G573200 chr4B 350966871 350967853 982 False 486.5 719 92.22000 482 1173 2 chr4B.!!$F1 691
16 TraesCS3B01G573200 chr7D 602913875 602914509 634 False 640.0 640 85.21300 1217 1856 1 chr7D.!!$F2 639
17 TraesCS3B01G573200 chr7D 468942588 468943571 983 True 236.0 255 90.22350 2703 3642 2 chr7D.!!$R1 939

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
609 610 0.030101 CTCAGCCGCGAAAAACCAAA 59.970 50.000 8.23 0.0 0.0 3.28 F
1527 2216 2.283676 AGGCGGAAGGACGGAGAA 60.284 61.111 0.00 0.0 0.0 2.87 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2251 3907 1.002624 TTTGAGGTGGCACCGGATC 60.003 57.895 29.76 22.08 44.9 3.36 R
3123 5161 0.031721 GGTGCGTATTACTCCCTCCG 59.968 60.000 0.00 0.00 0.0 4.63 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 5.783100 GCAATCCCAAACATAAACATGTG 57.217 39.130 0.00 0.00 34.56 3.21
23 24 4.630940 GCAATCCCAAACATAAACATGTGG 59.369 41.667 0.00 0.00 34.56 4.17
24 25 5.568423 GCAATCCCAAACATAAACATGTGGA 60.568 40.000 0.00 0.00 34.56 4.02
25 26 6.462500 CAATCCCAAACATAAACATGTGGAA 58.538 36.000 0.00 0.00 34.56 3.53
26 27 5.720371 TCCCAAACATAAACATGTGGAAG 57.280 39.130 0.00 0.00 34.56 3.46
27 28 5.389520 TCCCAAACATAAACATGTGGAAGA 58.610 37.500 0.00 0.00 34.56 2.87
28 29 5.835819 TCCCAAACATAAACATGTGGAAGAA 59.164 36.000 0.00 0.00 34.56 2.52
29 30 6.015519 TCCCAAACATAAACATGTGGAAGAAG 60.016 38.462 0.00 0.00 34.56 2.85
30 31 5.634859 CCAAACATAAACATGTGGAAGAAGC 59.365 40.000 0.00 0.00 34.56 3.86
31 32 6.449698 CAAACATAAACATGTGGAAGAAGCT 58.550 36.000 0.00 0.00 34.56 3.74
32 33 5.886960 ACATAAACATGTGGAAGAAGCTC 57.113 39.130 0.00 0.00 32.79 4.09
33 34 4.393062 ACATAAACATGTGGAAGAAGCTCG 59.607 41.667 0.00 0.00 32.79 5.03
34 35 2.550830 AACATGTGGAAGAAGCTCGT 57.449 45.000 0.00 0.00 0.00 4.18
35 36 1.800805 ACATGTGGAAGAAGCTCGTG 58.199 50.000 0.00 0.00 0.00 4.35
36 37 0.445436 CATGTGGAAGAAGCTCGTGC 59.555 55.000 0.07 0.07 40.05 5.34
48 49 2.381725 GCTCGTGCTTAAGGTAACCT 57.618 50.000 4.29 0.00 36.03 3.50
49 50 3.515330 GCTCGTGCTTAAGGTAACCTA 57.485 47.619 4.29 0.00 36.03 3.08
50 51 4.056092 GCTCGTGCTTAAGGTAACCTAT 57.944 45.455 4.29 0.00 36.03 2.57
51 52 4.049869 GCTCGTGCTTAAGGTAACCTATC 58.950 47.826 4.29 0.00 36.03 2.08
52 53 4.202131 GCTCGTGCTTAAGGTAACCTATCT 60.202 45.833 4.29 0.00 36.03 1.98
53 54 5.511234 TCGTGCTTAAGGTAACCTATCTC 57.489 43.478 4.29 0.00 31.13 2.75
54 55 4.951715 TCGTGCTTAAGGTAACCTATCTCA 59.048 41.667 4.29 0.00 31.13 3.27
55 56 5.419788 TCGTGCTTAAGGTAACCTATCTCAA 59.580 40.000 4.29 0.00 31.13 3.02
56 57 5.749109 CGTGCTTAAGGTAACCTATCTCAAG 59.251 44.000 4.29 0.00 31.13 3.02
57 58 6.627508 CGTGCTTAAGGTAACCTATCTCAAGT 60.628 42.308 4.29 0.00 31.13 3.16
58 59 7.104290 GTGCTTAAGGTAACCTATCTCAAGTT 58.896 38.462 4.29 0.00 31.13 2.66
59 60 7.606839 GTGCTTAAGGTAACCTATCTCAAGTTT 59.393 37.037 4.29 0.00 31.13 2.66
60 61 7.606456 TGCTTAAGGTAACCTATCTCAAGTTTG 59.394 37.037 4.29 0.00 31.13 2.93
61 62 7.414208 GCTTAAGGTAACCTATCTCAAGTTTGC 60.414 40.741 4.29 0.00 31.13 3.68
62 63 5.499004 AGGTAACCTATCTCAAGTTTGCA 57.501 39.130 0.00 0.00 28.47 4.08
63 64 5.246307 AGGTAACCTATCTCAAGTTTGCAC 58.754 41.667 0.00 0.00 28.47 4.57
64 65 5.001232 GGTAACCTATCTCAAGTTTGCACA 58.999 41.667 0.00 0.00 0.00 4.57
65 66 5.648092 GGTAACCTATCTCAAGTTTGCACAT 59.352 40.000 0.00 0.00 0.00 3.21
66 67 5.633830 AACCTATCTCAAGTTTGCACATG 57.366 39.130 0.00 0.00 0.00 3.21
67 68 4.910195 ACCTATCTCAAGTTTGCACATGA 58.090 39.130 0.00 0.00 0.00 3.07
68 69 5.316167 ACCTATCTCAAGTTTGCACATGAA 58.684 37.500 0.00 0.00 30.35 2.57
69 70 5.413833 ACCTATCTCAAGTTTGCACATGAAG 59.586 40.000 0.00 0.00 30.35 3.02
70 71 5.645067 CCTATCTCAAGTTTGCACATGAAGA 59.355 40.000 0.00 0.00 30.35 2.87
71 72 4.818534 TCTCAAGTTTGCACATGAAGAC 57.181 40.909 0.00 0.00 30.35 3.01
72 73 3.248363 TCTCAAGTTTGCACATGAAGACG 59.752 43.478 0.00 0.00 30.35 4.18
73 74 3.202097 TCAAGTTTGCACATGAAGACGA 58.798 40.909 0.00 0.00 27.57 4.20
74 75 3.002246 TCAAGTTTGCACATGAAGACGAC 59.998 43.478 0.00 0.00 27.57 4.34
75 76 2.560504 AGTTTGCACATGAAGACGACA 58.439 42.857 0.00 0.00 0.00 4.35
76 77 3.141398 AGTTTGCACATGAAGACGACAT 58.859 40.909 0.00 0.00 0.00 3.06
77 78 3.187227 AGTTTGCACATGAAGACGACATC 59.813 43.478 0.00 0.00 0.00 3.06
78 79 1.725641 TGCACATGAAGACGACATCC 58.274 50.000 0.00 0.00 0.00 3.51
79 80 1.001860 TGCACATGAAGACGACATCCA 59.998 47.619 0.00 0.00 0.00 3.41
80 81 1.394917 GCACATGAAGACGACATCCAC 59.605 52.381 0.00 0.00 0.00 4.02
81 82 2.687370 CACATGAAGACGACATCCACA 58.313 47.619 0.00 0.00 0.00 4.17
82 83 2.413112 CACATGAAGACGACATCCACAC 59.587 50.000 0.00 0.00 0.00 3.82
83 84 2.002586 CATGAAGACGACATCCACACC 58.997 52.381 0.00 0.00 0.00 4.16
84 85 0.038618 TGAAGACGACATCCACACCG 60.039 55.000 0.00 0.00 0.00 4.94
85 86 0.736325 GAAGACGACATCCACACCGG 60.736 60.000 0.00 0.00 0.00 5.28
86 87 1.469335 AAGACGACATCCACACCGGT 61.469 55.000 0.00 0.00 35.57 5.28
87 88 0.609957 AGACGACATCCACACCGGTA 60.610 55.000 6.87 0.00 35.57 4.02
88 89 0.244450 GACGACATCCACACCGGTAA 59.756 55.000 6.87 0.00 35.57 2.85
89 90 0.245539 ACGACATCCACACCGGTAAG 59.754 55.000 6.87 1.85 35.57 2.34
90 91 0.528924 CGACATCCACACCGGTAAGA 59.471 55.000 6.87 4.55 35.57 2.10
91 92 1.136305 CGACATCCACACCGGTAAGAT 59.864 52.381 6.87 7.10 35.57 2.40
92 93 2.359848 CGACATCCACACCGGTAAGATA 59.640 50.000 6.87 0.00 35.57 1.98
93 94 3.005472 CGACATCCACACCGGTAAGATAT 59.995 47.826 6.87 0.00 35.57 1.63
94 95 4.307432 GACATCCACACCGGTAAGATATG 58.693 47.826 6.87 10.49 35.57 1.78
95 96 3.709653 ACATCCACACCGGTAAGATATGT 59.290 43.478 6.87 11.16 35.57 2.29
96 97 4.897076 ACATCCACACCGGTAAGATATGTA 59.103 41.667 6.87 0.00 35.57 2.29
97 98 4.924305 TCCACACCGGTAAGATATGTAC 57.076 45.455 6.87 0.00 35.57 2.90
98 99 3.638160 TCCACACCGGTAAGATATGTACC 59.362 47.826 6.87 3.07 38.13 3.34
99 100 3.640029 CCACACCGGTAAGATATGTACCT 59.360 47.826 6.87 0.00 39.16 3.08
100 101 4.100498 CCACACCGGTAAGATATGTACCTT 59.900 45.833 6.87 0.00 39.16 3.50
101 102 5.395990 CCACACCGGTAAGATATGTACCTTT 60.396 44.000 6.87 0.00 39.16 3.11
102 103 5.751990 CACACCGGTAAGATATGTACCTTTC 59.248 44.000 6.87 0.00 39.16 2.62
103 104 4.980434 CACCGGTAAGATATGTACCTTTCG 59.020 45.833 6.87 0.00 39.16 3.46
104 105 4.646492 ACCGGTAAGATATGTACCTTTCGT 59.354 41.667 4.49 0.00 39.16 3.85
105 106 4.980434 CCGGTAAGATATGTACCTTTCGTG 59.020 45.833 0.00 0.00 39.16 4.35
106 107 5.221106 CCGGTAAGATATGTACCTTTCGTGA 60.221 44.000 0.00 0.00 39.16 4.35
107 108 6.267817 CGGTAAGATATGTACCTTTCGTGAA 58.732 40.000 9.49 0.00 39.16 3.18
108 109 6.753279 CGGTAAGATATGTACCTTTCGTGAAA 59.247 38.462 9.49 0.00 39.16 2.69
109 110 7.437267 CGGTAAGATATGTACCTTTCGTGAAAT 59.563 37.037 9.49 0.00 39.16 2.17
110 111 8.762426 GGTAAGATATGTACCTTTCGTGAAATC 58.238 37.037 5.32 0.00 38.41 2.17
111 112 7.464830 AAGATATGTACCTTTCGTGAAATCG 57.535 36.000 0.00 0.00 0.00 3.34
112 113 6.570692 AGATATGTACCTTTCGTGAAATCGT 58.429 36.000 0.00 0.00 0.00 3.73
113 114 4.921470 ATGTACCTTTCGTGAAATCGTG 57.079 40.909 0.00 0.00 0.00 4.35
114 115 2.477375 TGTACCTTTCGTGAAATCGTGC 59.523 45.455 0.00 0.83 0.00 5.34
115 116 0.872388 ACCTTTCGTGAAATCGTGCC 59.128 50.000 0.00 0.00 0.00 5.01
116 117 0.179225 CCTTTCGTGAAATCGTGCCG 60.179 55.000 0.00 0.00 0.00 5.69
117 118 0.787787 CTTTCGTGAAATCGTGCCGA 59.212 50.000 0.00 0.00 41.13 5.54
119 120 0.718904 TTCGTGAAATCGTGCCGATG 59.281 50.000 10.25 0.00 46.30 3.84
120 121 0.109039 TCGTGAAATCGTGCCGATGA 60.109 50.000 10.25 1.87 46.30 2.92
121 122 0.718904 CGTGAAATCGTGCCGATGAA 59.281 50.000 10.25 0.00 46.30 2.57
122 123 1.267038 CGTGAAATCGTGCCGATGAAG 60.267 52.381 10.25 0.00 46.30 3.02
123 124 0.726827 TGAAATCGTGCCGATGAAGC 59.273 50.000 10.25 2.94 46.30 3.86
124 125 0.726827 GAAATCGTGCCGATGAAGCA 59.273 50.000 10.25 0.00 46.30 3.91
125 126 0.729116 AAATCGTGCCGATGAAGCAG 59.271 50.000 10.25 0.00 46.30 4.24
126 127 0.108186 AATCGTGCCGATGAAGCAGA 60.108 50.000 10.25 0.00 46.30 4.26
127 128 0.105593 ATCGTGCCGATGAAGCAGAT 59.894 50.000 8.94 0.00 45.24 2.90
128 129 0.807275 TCGTGCCGATGAAGCAGATG 60.807 55.000 0.00 0.00 41.87 2.90
129 130 1.769098 CGTGCCGATGAAGCAGATGG 61.769 60.000 0.00 0.00 41.87 3.51
130 131 1.153107 TGCCGATGAAGCAGATGGG 60.153 57.895 0.00 0.00 34.69 4.00
131 132 1.895707 GCCGATGAAGCAGATGGGG 60.896 63.158 0.00 0.00 0.00 4.96
132 133 1.832219 CCGATGAAGCAGATGGGGA 59.168 57.895 0.00 0.00 0.00 4.81
133 134 0.181114 CCGATGAAGCAGATGGGGAA 59.819 55.000 0.00 0.00 0.00 3.97
134 135 1.590932 CGATGAAGCAGATGGGGAAG 58.409 55.000 0.00 0.00 0.00 3.46
135 136 1.316651 GATGAAGCAGATGGGGAAGC 58.683 55.000 0.00 0.00 0.00 3.86
136 137 0.924823 ATGAAGCAGATGGGGAAGCT 59.075 50.000 0.00 0.00 39.37 3.74
137 138 0.034767 TGAAGCAGATGGGGAAGCTG 60.035 55.000 0.00 0.00 45.49 4.24
138 139 0.254178 GAAGCAGATGGGGAAGCTGA 59.746 55.000 0.00 0.00 45.58 4.26
139 140 0.924823 AAGCAGATGGGGAAGCTGAT 59.075 50.000 0.00 0.00 44.30 2.90
140 141 0.183014 AGCAGATGGGGAAGCTGATG 59.817 55.000 0.00 0.00 45.58 3.07
141 142 0.822532 GCAGATGGGGAAGCTGATGG 60.823 60.000 0.00 0.00 45.58 3.51
142 143 0.841961 CAGATGGGGAAGCTGATGGA 59.158 55.000 0.00 0.00 45.58 3.41
143 144 0.842635 AGATGGGGAAGCTGATGGAC 59.157 55.000 0.00 0.00 0.00 4.02
144 145 0.533755 GATGGGGAAGCTGATGGACG 60.534 60.000 0.00 0.00 0.00 4.79
145 146 1.274703 ATGGGGAAGCTGATGGACGT 61.275 55.000 0.00 0.00 0.00 4.34
146 147 1.450312 GGGGAAGCTGATGGACGTG 60.450 63.158 0.00 0.00 0.00 4.49
147 148 1.450312 GGGAAGCTGATGGACGTGG 60.450 63.158 0.00 0.00 0.00 4.94
148 149 2.109126 GGAAGCTGATGGACGTGGC 61.109 63.158 0.00 0.00 0.00 5.01
149 150 1.375908 GAAGCTGATGGACGTGGCA 60.376 57.895 0.00 0.00 0.00 4.92
150 151 0.745845 GAAGCTGATGGACGTGGCAT 60.746 55.000 0.00 0.00 0.00 4.40
151 152 0.541392 AAGCTGATGGACGTGGCATA 59.459 50.000 0.00 0.00 0.00 3.14
152 153 0.179073 AGCTGATGGACGTGGCATAC 60.179 55.000 0.00 0.00 0.00 2.39
153 154 0.179073 GCTGATGGACGTGGCATACT 60.179 55.000 0.00 0.00 0.00 2.12
154 155 1.068588 GCTGATGGACGTGGCATACTA 59.931 52.381 0.00 0.00 0.00 1.82
155 156 2.743938 CTGATGGACGTGGCATACTAC 58.256 52.381 0.00 0.00 0.00 2.73
156 157 1.411246 TGATGGACGTGGCATACTACC 59.589 52.381 0.00 0.00 0.00 3.18
157 158 0.756903 ATGGACGTGGCATACTACCC 59.243 55.000 0.00 0.00 0.00 3.69
158 159 1.332144 TGGACGTGGCATACTACCCC 61.332 60.000 0.00 0.00 0.00 4.95
159 160 1.444672 GACGTGGCATACTACCCCC 59.555 63.158 0.00 0.00 0.00 5.40
160 161 1.002533 ACGTGGCATACTACCCCCT 59.997 57.895 0.00 0.00 0.00 4.79
161 162 1.335132 ACGTGGCATACTACCCCCTG 61.335 60.000 0.00 0.00 0.00 4.45
162 163 1.148498 GTGGCATACTACCCCCTGC 59.852 63.158 0.00 0.00 0.00 4.85
163 164 2.426023 GGCATACTACCCCCTGCG 59.574 66.667 0.00 0.00 35.47 5.18
164 165 2.138179 GGCATACTACCCCCTGCGA 61.138 63.158 0.00 0.00 35.47 5.10
165 166 1.481056 GGCATACTACCCCCTGCGAT 61.481 60.000 0.00 0.00 35.47 4.58
166 167 0.037232 GCATACTACCCCCTGCGATC 60.037 60.000 0.00 0.00 0.00 3.69
167 168 1.338107 CATACTACCCCCTGCGATCA 58.662 55.000 0.00 0.00 0.00 2.92
168 169 1.691976 CATACTACCCCCTGCGATCAA 59.308 52.381 0.00 0.00 0.00 2.57
169 170 1.410004 TACTACCCCCTGCGATCAAG 58.590 55.000 0.00 0.00 0.00 3.02
170 171 1.227674 CTACCCCCTGCGATCAAGC 60.228 63.158 0.00 0.00 37.71 4.01
171 172 1.689233 TACCCCCTGCGATCAAGCT 60.689 57.895 0.00 0.00 38.13 3.74
172 173 1.971505 TACCCCCTGCGATCAAGCTG 61.972 60.000 0.00 0.00 38.13 4.24
173 174 3.207669 CCCCTGCGATCAAGCTGC 61.208 66.667 0.00 0.00 38.13 5.25
174 175 3.570638 CCCTGCGATCAAGCTGCG 61.571 66.667 0.00 0.00 38.13 5.18
175 176 3.570638 CCTGCGATCAAGCTGCGG 61.571 66.667 0.00 0.00 38.13 5.69
176 177 2.816958 CTGCGATCAAGCTGCGGT 60.817 61.111 0.00 0.00 38.13 5.68
177 178 3.092192 CTGCGATCAAGCTGCGGTG 62.092 63.158 0.00 0.00 38.13 4.94
178 179 3.869272 GCGATCAAGCTGCGGTGG 61.869 66.667 6.54 0.00 0.00 4.61
179 180 2.434884 CGATCAAGCTGCGGTGGT 60.435 61.111 6.54 0.00 0.00 4.16
180 181 2.034879 CGATCAAGCTGCGGTGGTT 61.035 57.895 6.54 0.00 0.00 3.67
181 182 1.577328 CGATCAAGCTGCGGTGGTTT 61.577 55.000 6.54 0.00 0.00 3.27
182 183 0.109597 GATCAAGCTGCGGTGGTTTG 60.110 55.000 6.54 0.00 0.00 2.93
183 184 1.526575 ATCAAGCTGCGGTGGTTTGG 61.527 55.000 6.54 0.00 0.00 3.28
184 185 3.605664 AAGCTGCGGTGGTTTGGC 61.606 61.111 0.00 0.00 0.00 4.52
187 188 3.726517 CTGCGGTGGTTTGGCGAG 61.727 66.667 0.00 0.00 0.00 5.03
188 189 4.243008 TGCGGTGGTTTGGCGAGA 62.243 61.111 0.00 0.00 0.00 4.04
189 190 2.975799 GCGGTGGTTTGGCGAGAA 60.976 61.111 0.00 0.00 0.00 2.87
190 191 2.943653 CGGTGGTTTGGCGAGAAC 59.056 61.111 0.00 0.00 0.00 3.01
191 192 1.890041 CGGTGGTTTGGCGAGAACA 60.890 57.895 0.00 0.00 0.00 3.18
192 193 1.841663 CGGTGGTTTGGCGAGAACAG 61.842 60.000 0.00 0.00 0.00 3.16
193 194 1.282875 GTGGTTTGGCGAGAACAGC 59.717 57.895 0.00 0.00 0.00 4.40
194 195 2.250939 TGGTTTGGCGAGAACAGCG 61.251 57.895 0.00 0.00 35.00 5.18
195 196 2.556287 GTTTGGCGAGAACAGCGG 59.444 61.111 0.00 0.00 35.00 5.52
196 197 2.668212 TTTGGCGAGAACAGCGGG 60.668 61.111 0.00 0.00 35.00 6.13
197 198 3.171828 TTTGGCGAGAACAGCGGGA 62.172 57.895 0.00 0.00 35.00 5.14
198 199 2.463589 TTTGGCGAGAACAGCGGGAT 62.464 55.000 0.00 0.00 35.00 3.85
199 200 2.586357 GGCGAGAACAGCGGGATC 60.586 66.667 0.00 0.00 35.00 3.36
200 201 2.496817 GCGAGAACAGCGGGATCT 59.503 61.111 0.00 0.00 0.00 2.75
201 202 1.153549 GCGAGAACAGCGGGATCTT 60.154 57.895 0.00 0.00 0.00 2.40
202 203 1.424493 GCGAGAACAGCGGGATCTTG 61.424 60.000 0.00 5.25 0.00 3.02
203 204 0.108615 CGAGAACAGCGGGATCTTGT 60.109 55.000 0.00 0.00 0.00 3.16
204 205 1.673033 CGAGAACAGCGGGATCTTGTT 60.673 52.381 0.00 0.00 0.00 2.83
205 206 2.416836 CGAGAACAGCGGGATCTTGTTA 60.417 50.000 0.00 0.00 0.00 2.41
206 207 3.738281 CGAGAACAGCGGGATCTTGTTAT 60.738 47.826 0.00 0.00 0.00 1.89
207 208 4.192317 GAGAACAGCGGGATCTTGTTATT 58.808 43.478 0.00 0.00 0.00 1.40
208 209 4.192317 AGAACAGCGGGATCTTGTTATTC 58.808 43.478 0.00 0.00 0.00 1.75
209 210 3.627395 ACAGCGGGATCTTGTTATTCA 57.373 42.857 0.00 0.00 0.00 2.57
210 211 3.270877 ACAGCGGGATCTTGTTATTCAC 58.729 45.455 0.00 0.00 0.00 3.18
211 212 2.614057 CAGCGGGATCTTGTTATTCACC 59.386 50.000 0.00 0.00 0.00 4.02
212 213 2.238646 AGCGGGATCTTGTTATTCACCA 59.761 45.455 0.00 0.00 0.00 4.17
213 214 3.117888 AGCGGGATCTTGTTATTCACCAT 60.118 43.478 0.00 0.00 0.00 3.55
214 215 3.003689 GCGGGATCTTGTTATTCACCATG 59.996 47.826 0.00 0.00 0.00 3.66
215 216 3.565482 CGGGATCTTGTTATTCACCATGG 59.435 47.826 11.19 11.19 0.00 3.66
216 217 3.891366 GGGATCTTGTTATTCACCATGGG 59.109 47.826 18.09 5.22 0.00 4.00
217 218 4.386312 GGGATCTTGTTATTCACCATGGGA 60.386 45.833 18.09 7.80 0.00 4.37
218 219 4.823989 GGATCTTGTTATTCACCATGGGAG 59.176 45.833 18.09 8.50 0.00 4.30
219 220 5.397899 GGATCTTGTTATTCACCATGGGAGA 60.398 44.000 18.09 11.01 0.00 3.71
220 221 5.102953 TCTTGTTATTCACCATGGGAGAG 57.897 43.478 18.09 2.94 0.00 3.20
221 222 4.536090 TCTTGTTATTCACCATGGGAGAGT 59.464 41.667 18.09 12.66 0.00 3.24
222 223 4.220693 TGTTATTCACCATGGGAGAGTG 57.779 45.455 18.09 4.68 0.00 3.51
223 224 3.587061 TGTTATTCACCATGGGAGAGTGT 59.413 43.478 18.09 6.52 33.21 3.55
224 225 4.780554 TGTTATTCACCATGGGAGAGTGTA 59.219 41.667 18.09 0.00 33.21 2.90
225 226 5.104941 TGTTATTCACCATGGGAGAGTGTAG 60.105 44.000 18.09 0.00 33.21 2.74
226 227 1.195115 TCACCATGGGAGAGTGTAGC 58.805 55.000 18.09 0.00 33.21 3.58
227 228 0.179100 CACCATGGGAGAGTGTAGCG 60.179 60.000 18.09 0.00 0.00 4.26
228 229 1.330655 ACCATGGGAGAGTGTAGCGG 61.331 60.000 18.09 0.00 0.00 5.52
229 230 1.443407 CATGGGAGAGTGTAGCGGG 59.557 63.158 0.00 0.00 0.00 6.13
230 231 2.435693 ATGGGAGAGTGTAGCGGGC 61.436 63.158 0.00 0.00 0.00 6.13
231 232 3.075005 GGGAGAGTGTAGCGGGCA 61.075 66.667 0.00 0.00 0.00 5.36
232 233 2.184579 GGAGAGTGTAGCGGGCAC 59.815 66.667 0.00 1.08 37.13 5.01
233 234 2.646175 GGAGAGTGTAGCGGGCACA 61.646 63.158 10.09 0.00 39.17 4.57
234 235 1.292223 GAGAGTGTAGCGGGCACAA 59.708 57.895 10.09 0.00 39.17 3.33
235 236 1.004918 AGAGTGTAGCGGGCACAAC 60.005 57.895 10.09 4.96 39.17 3.32
236 237 2.357034 AGTGTAGCGGGCACAACG 60.357 61.111 10.09 0.00 39.17 4.10
237 238 3.419759 GTGTAGCGGGCACAACGG 61.420 66.667 0.00 0.00 36.88 4.44
243 244 4.690719 CGGGCACAACGGCACCTA 62.691 66.667 0.00 0.00 43.60 3.08
244 245 3.053896 GGGCACAACGGCACCTAC 61.054 66.667 0.00 0.00 43.60 3.18
245 246 2.281208 GGCACAACGGCACCTACA 60.281 61.111 0.00 0.00 40.76 2.74
246 247 1.674322 GGCACAACGGCACCTACAT 60.674 57.895 0.00 0.00 40.76 2.29
247 248 1.501741 GCACAACGGCACCTACATG 59.498 57.895 0.00 0.00 0.00 3.21
248 249 1.234615 GCACAACGGCACCTACATGT 61.235 55.000 2.69 2.69 0.00 3.21
249 250 1.234821 CACAACGGCACCTACATGTT 58.765 50.000 2.30 0.00 0.00 2.71
250 251 1.069296 CACAACGGCACCTACATGTTG 60.069 52.381 2.30 0.84 44.06 3.33
251 252 1.202710 ACAACGGCACCTACATGTTGA 60.203 47.619 2.30 0.00 41.76 3.18
252 253 1.876799 CAACGGCACCTACATGTTGAA 59.123 47.619 2.30 0.00 41.76 2.69
253 254 1.519408 ACGGCACCTACATGTTGAAC 58.481 50.000 2.30 0.00 0.00 3.18
254 255 0.802494 CGGCACCTACATGTTGAACC 59.198 55.000 2.30 3.51 0.00 3.62
255 256 1.610624 CGGCACCTACATGTTGAACCT 60.611 52.381 2.30 0.00 0.00 3.50
256 257 2.514803 GGCACCTACATGTTGAACCTT 58.485 47.619 2.30 0.00 0.00 3.50
257 258 2.488153 GGCACCTACATGTTGAACCTTC 59.512 50.000 2.30 0.00 0.00 3.46
258 259 2.159627 GCACCTACATGTTGAACCTTCG 59.840 50.000 2.30 0.00 0.00 3.79
259 260 2.742053 CACCTACATGTTGAACCTTCGG 59.258 50.000 2.30 0.00 0.00 4.30
260 261 2.290071 ACCTACATGTTGAACCTTCGGG 60.290 50.000 2.30 0.00 41.87 5.14
261 262 2.027561 CCTACATGTTGAACCTTCGGGA 60.028 50.000 2.30 0.00 38.77 5.14
262 263 2.185004 ACATGTTGAACCTTCGGGAG 57.815 50.000 0.00 0.00 38.77 4.30
272 273 3.233355 CTTCGGGAGGAAGTGGTTG 57.767 57.895 0.00 0.00 45.82 3.77
273 274 0.685097 CTTCGGGAGGAAGTGGTTGA 59.315 55.000 0.00 0.00 45.82 3.18
274 275 0.395312 TTCGGGAGGAAGTGGTTGAC 59.605 55.000 0.00 0.00 0.00 3.18
275 276 0.761323 TCGGGAGGAAGTGGTTGACA 60.761 55.000 0.00 0.00 0.00 3.58
276 277 0.107831 CGGGAGGAAGTGGTTGACAA 59.892 55.000 0.00 0.00 0.00 3.18
277 278 1.878102 CGGGAGGAAGTGGTTGACAAG 60.878 57.143 0.00 0.00 0.00 3.16
278 279 1.545651 GGGAGGAAGTGGTTGACAAGG 60.546 57.143 0.00 0.00 0.00 3.61
279 280 1.143073 GGAGGAAGTGGTTGACAAGGT 59.857 52.381 0.00 0.00 0.00 3.50
280 281 2.222027 GAGGAAGTGGTTGACAAGGTG 58.778 52.381 0.00 0.00 0.00 4.00
281 282 1.133792 AGGAAGTGGTTGACAAGGTGG 60.134 52.381 0.00 0.00 0.00 4.61
282 283 0.668535 GAAGTGGTTGACAAGGTGGC 59.331 55.000 0.00 0.00 0.00 5.01
283 284 0.033601 AAGTGGTTGACAAGGTGGCA 60.034 50.000 0.00 0.00 30.30 4.92
284 285 0.466189 AGTGGTTGACAAGGTGGCAG 60.466 55.000 0.00 0.00 36.33 4.85
285 286 1.152777 TGGTTGACAAGGTGGCAGG 60.153 57.895 0.00 0.00 36.33 4.85
286 287 2.564721 GGTTGACAAGGTGGCAGGC 61.565 63.158 0.00 0.00 36.33 4.85
287 288 2.594303 TTGACAAGGTGGCAGGCG 60.594 61.111 0.00 0.00 36.33 5.52
288 289 3.113514 TTGACAAGGTGGCAGGCGA 62.114 57.895 0.00 0.00 36.33 5.54
289 290 2.743928 GACAAGGTGGCAGGCGAG 60.744 66.667 0.00 0.00 0.00 5.03
290 291 4.335647 ACAAGGTGGCAGGCGAGG 62.336 66.667 0.00 0.00 0.00 4.63
299 300 3.710722 CAGGCGAGGGGCACTCTT 61.711 66.667 15.97 0.00 46.16 2.85
300 301 3.710722 AGGCGAGGGGCACTCTTG 61.711 66.667 15.97 0.68 46.16 3.02
301 302 4.785453 GGCGAGGGGCACTCTTGG 62.785 72.222 15.97 0.00 46.16 3.61
302 303 3.706373 GCGAGGGGCACTCTTGGA 61.706 66.667 15.97 0.00 44.33 3.53
303 304 3.068881 CGAGGGGCACTCTTGGAA 58.931 61.111 15.97 0.00 44.33 3.53
304 305 1.604378 CGAGGGGCACTCTTGGAAT 59.396 57.895 15.97 0.00 44.33 3.01
305 306 0.830648 CGAGGGGCACTCTTGGAATA 59.169 55.000 15.97 0.00 44.33 1.75
306 307 1.209504 CGAGGGGCACTCTTGGAATAA 59.790 52.381 15.97 0.00 44.33 1.40
307 308 2.644676 GAGGGGCACTCTTGGAATAAC 58.355 52.381 10.16 0.00 43.14 1.89
308 309 1.285078 AGGGGCACTCTTGGAATAACC 59.715 52.381 0.00 0.00 39.54 2.85
309 310 1.285078 GGGGCACTCTTGGAATAACCT 59.715 52.381 0.00 0.00 39.86 3.50
310 311 2.369394 GGGCACTCTTGGAATAACCTG 58.631 52.381 0.00 0.00 39.86 4.00
311 312 1.745653 GGCACTCTTGGAATAACCTGC 59.254 52.381 0.00 0.00 39.86 4.85
312 313 2.436417 GCACTCTTGGAATAACCTGCA 58.564 47.619 0.00 0.00 39.86 4.41
313 314 2.162408 GCACTCTTGGAATAACCTGCAC 59.838 50.000 0.00 0.00 39.86 4.57
314 315 2.416547 CACTCTTGGAATAACCTGCACG 59.583 50.000 0.00 0.00 39.86 5.34
315 316 2.009774 CTCTTGGAATAACCTGCACGG 58.990 52.381 1.16 1.16 39.86 4.94
316 317 1.094785 CTTGGAATAACCTGCACGGG 58.905 55.000 7.06 0.00 39.86 5.28
317 318 0.402504 TTGGAATAACCTGCACGGGT 59.597 50.000 0.00 0.00 42.05 5.28
318 319 1.277579 TGGAATAACCTGCACGGGTA 58.722 50.000 0.53 0.28 39.88 3.69
320 321 2.218603 GGAATAACCTGCACGGGTATG 58.781 52.381 11.92 0.00 45.14 2.39
321 322 2.158871 GGAATAACCTGCACGGGTATGA 60.159 50.000 11.92 0.00 45.14 2.15
322 323 2.910688 ATAACCTGCACGGGTATGAG 57.089 50.000 10.78 0.00 44.18 2.90
323 324 1.855295 TAACCTGCACGGGTATGAGA 58.145 50.000 0.53 0.00 38.87 3.27
324 325 1.204146 AACCTGCACGGGTATGAGAT 58.796 50.000 0.53 0.00 38.87 2.75
325 326 0.465705 ACCTGCACGGGTATGAGATG 59.534 55.000 0.00 0.00 37.90 2.90
326 327 0.250038 CCTGCACGGGTATGAGATGG 60.250 60.000 0.00 0.00 0.00 3.51
327 328 0.752658 CTGCACGGGTATGAGATGGA 59.247 55.000 0.00 0.00 0.00 3.41
328 329 1.345741 CTGCACGGGTATGAGATGGAT 59.654 52.381 0.00 0.00 0.00 3.41
329 330 2.562738 CTGCACGGGTATGAGATGGATA 59.437 50.000 0.00 0.00 0.00 2.59
330 331 3.173151 TGCACGGGTATGAGATGGATAT 58.827 45.455 0.00 0.00 0.00 1.63
331 332 3.055891 TGCACGGGTATGAGATGGATATG 60.056 47.826 0.00 0.00 0.00 1.78
332 333 3.679917 GCACGGGTATGAGATGGATATGG 60.680 52.174 0.00 0.00 0.00 2.74
333 334 2.501723 ACGGGTATGAGATGGATATGGC 59.498 50.000 0.00 0.00 0.00 4.40
334 335 2.481969 CGGGTATGAGATGGATATGGCG 60.482 54.545 0.00 0.00 0.00 5.69
335 336 2.158900 GGGTATGAGATGGATATGGCGG 60.159 54.545 0.00 0.00 0.00 6.13
336 337 2.555199 GTATGAGATGGATATGGCGGC 58.445 52.381 0.00 0.00 0.00 6.53
337 338 0.986527 ATGAGATGGATATGGCGGCA 59.013 50.000 16.34 16.34 0.00 5.69
338 339 0.986527 TGAGATGGATATGGCGGCAT 59.013 50.000 28.47 28.47 0.00 4.40
339 340 2.187100 TGAGATGGATATGGCGGCATA 58.813 47.619 30.81 30.81 0.00 3.14
340 341 2.093500 TGAGATGGATATGGCGGCATAC 60.093 50.000 31.24 23.17 0.00 2.39
341 342 1.210478 AGATGGATATGGCGGCATACC 59.790 52.381 31.24 29.30 0.00 2.73
342 343 1.210478 GATGGATATGGCGGCATACCT 59.790 52.381 31.24 18.37 0.00 3.08
343 344 1.064003 TGGATATGGCGGCATACCTT 58.936 50.000 31.24 17.64 0.00 3.50
344 345 1.271325 TGGATATGGCGGCATACCTTG 60.271 52.381 31.24 0.00 0.00 3.61
352 353 4.126524 GCATACCTTGCCTCCGTC 57.873 61.111 0.00 0.00 46.15 4.79
353 354 1.883084 GCATACCTTGCCTCCGTCG 60.883 63.158 0.00 0.00 46.15 5.12
354 355 1.227263 CATACCTTGCCTCCGTCGG 60.227 63.158 4.39 4.39 0.00 4.79
362 363 2.835431 CCTCCGTCGGCCAGAGAT 60.835 66.667 6.34 0.00 0.00 2.75
363 364 2.725008 CTCCGTCGGCCAGAGATC 59.275 66.667 6.34 0.00 0.00 2.75
364 365 2.833582 TCCGTCGGCCAGAGATCC 60.834 66.667 6.34 0.00 0.00 3.36
365 366 2.835431 CCGTCGGCCAGAGATCCT 60.835 66.667 2.24 0.00 0.00 3.24
366 367 2.427245 CCGTCGGCCAGAGATCCTT 61.427 63.158 2.24 0.00 0.00 3.36
367 368 1.066587 CGTCGGCCAGAGATCCTTC 59.933 63.158 2.24 0.00 0.00 3.46
368 369 1.667154 CGTCGGCCAGAGATCCTTCA 61.667 60.000 2.24 0.00 0.00 3.02
369 370 0.179097 GTCGGCCAGAGATCCTTCAC 60.179 60.000 2.24 0.00 0.00 3.18
370 371 0.324738 TCGGCCAGAGATCCTTCACT 60.325 55.000 2.24 0.00 0.00 3.41
371 372 0.539051 CGGCCAGAGATCCTTCACTT 59.461 55.000 2.24 0.00 0.00 3.16
372 373 1.741732 CGGCCAGAGATCCTTCACTTG 60.742 57.143 2.24 0.00 0.00 3.16
373 374 1.556911 GGCCAGAGATCCTTCACTTGA 59.443 52.381 0.00 0.00 0.00 3.02
374 375 2.419851 GGCCAGAGATCCTTCACTTGAG 60.420 54.545 0.00 0.00 0.00 3.02
375 376 2.235898 GCCAGAGATCCTTCACTTGAGT 59.764 50.000 0.00 0.00 0.00 3.41
376 377 3.859443 CCAGAGATCCTTCACTTGAGTG 58.141 50.000 4.77 4.77 46.91 3.51
388 389 3.170791 ACTTGAGTGAGCATACCGATG 57.829 47.619 0.00 0.00 36.02 3.84
389 390 2.159043 ACTTGAGTGAGCATACCGATGG 60.159 50.000 0.00 0.00 33.26 3.51
390 391 0.752658 TGAGTGAGCATACCGATGGG 59.247 55.000 0.00 0.00 40.11 4.00
391 392 1.040646 GAGTGAGCATACCGATGGGA 58.959 55.000 0.00 0.00 36.97 4.37
392 393 1.000283 GAGTGAGCATACCGATGGGAG 60.000 57.143 0.00 0.00 36.97 4.30
393 394 1.040646 GTGAGCATACCGATGGGAGA 58.959 55.000 0.00 0.00 36.97 3.71
394 395 1.040646 TGAGCATACCGATGGGAGAC 58.959 55.000 0.00 0.00 36.97 3.36
395 396 1.333177 GAGCATACCGATGGGAGACT 58.667 55.000 0.00 0.00 36.97 3.24
396 397 1.000283 GAGCATACCGATGGGAGACTG 60.000 57.143 0.00 0.00 36.97 3.51
397 398 0.753262 GCATACCGATGGGAGACTGT 59.247 55.000 0.00 0.00 36.97 3.55
398 399 1.269831 GCATACCGATGGGAGACTGTC 60.270 57.143 0.00 0.00 36.97 3.51
399 400 1.001268 CATACCGATGGGAGACTGTCG 60.001 57.143 0.00 0.00 37.08 4.35
400 401 1.381928 TACCGATGGGAGACTGTCGC 61.382 60.000 0.00 2.68 36.39 5.19
407 408 3.942130 TGGGAGACTGTCGCATATATG 57.058 47.619 13.45 8.45 42.94 1.78
408 409 2.562738 TGGGAGACTGTCGCATATATGG 59.437 50.000 14.51 5.05 42.94 2.74
409 410 2.826128 GGGAGACTGTCGCATATATGGA 59.174 50.000 14.51 7.23 38.04 3.41
410 411 3.119316 GGGAGACTGTCGCATATATGGAG 60.119 52.174 14.51 2.85 38.04 3.86
411 412 3.508012 GGAGACTGTCGCATATATGGAGT 59.492 47.826 14.51 5.59 0.00 3.85
412 413 4.021894 GGAGACTGTCGCATATATGGAGTT 60.022 45.833 14.51 0.00 0.00 3.01
413 414 5.183331 GGAGACTGTCGCATATATGGAGTTA 59.817 44.000 14.51 0.59 0.00 2.24
414 415 6.260870 AGACTGTCGCATATATGGAGTTAG 57.739 41.667 14.51 10.10 0.00 2.34
415 416 5.184096 AGACTGTCGCATATATGGAGTTAGG 59.816 44.000 14.51 2.68 0.00 2.69
416 417 5.077564 ACTGTCGCATATATGGAGTTAGGA 58.922 41.667 14.51 0.00 0.00 2.94
417 418 5.717178 ACTGTCGCATATATGGAGTTAGGAT 59.283 40.000 14.51 0.00 0.00 3.24
418 419 5.965922 TGTCGCATATATGGAGTTAGGATG 58.034 41.667 14.51 0.00 0.00 3.51
419 420 4.806247 GTCGCATATATGGAGTTAGGATGC 59.194 45.833 14.51 0.00 35.88 3.91
420 421 4.466015 TCGCATATATGGAGTTAGGATGCA 59.534 41.667 14.51 0.00 38.45 3.96
421 422 4.807834 CGCATATATGGAGTTAGGATGCAG 59.192 45.833 14.51 0.00 38.45 4.41
422 423 4.574013 GCATATATGGAGTTAGGATGCAGC 59.426 45.833 14.51 0.00 38.43 5.25
423 424 5.737860 CATATATGGAGTTAGGATGCAGCA 58.262 41.667 3.51 0.00 0.00 4.41
424 425 4.712051 ATATGGAGTTAGGATGCAGCAA 57.288 40.909 3.51 0.00 0.00 3.91
425 426 2.877097 TGGAGTTAGGATGCAGCAAA 57.123 45.000 3.51 0.00 0.00 3.68
426 427 3.370840 TGGAGTTAGGATGCAGCAAAT 57.629 42.857 3.51 0.00 0.00 2.32
427 428 3.018856 TGGAGTTAGGATGCAGCAAATG 58.981 45.455 3.51 0.00 0.00 2.32
428 429 2.360165 GGAGTTAGGATGCAGCAAATGG 59.640 50.000 3.51 0.00 0.00 3.16
429 430 2.360165 GAGTTAGGATGCAGCAAATGGG 59.640 50.000 3.51 0.00 0.00 4.00
430 431 2.025037 AGTTAGGATGCAGCAAATGGGA 60.025 45.455 3.51 0.00 0.00 4.37
431 432 2.353357 TAGGATGCAGCAAATGGGAG 57.647 50.000 3.51 0.00 0.00 4.30
432 433 0.627451 AGGATGCAGCAAATGGGAGA 59.373 50.000 3.51 0.00 0.00 3.71
433 434 0.743097 GGATGCAGCAAATGGGAGAC 59.257 55.000 3.51 0.00 0.00 3.36
434 435 1.684248 GGATGCAGCAAATGGGAGACT 60.684 52.381 3.51 0.00 0.00 3.24
435 436 1.404391 GATGCAGCAAATGGGAGACTG 59.596 52.381 0.00 0.00 0.00 3.51
436 437 0.111061 TGCAGCAAATGGGAGACTGT 59.889 50.000 0.00 0.00 0.00 3.55
437 438 0.807496 GCAGCAAATGGGAGACTGTC 59.193 55.000 0.00 0.00 0.00 3.51
438 439 1.081892 CAGCAAATGGGAGACTGTCG 58.918 55.000 1.52 0.00 0.00 4.35
439 440 0.674895 AGCAAATGGGAGACTGTCGC 60.675 55.000 2.68 2.68 38.63 5.19
446 447 3.942130 TGGGAGACTGTCGCATATATG 57.058 47.619 13.45 8.45 42.94 1.78
447 448 2.562738 TGGGAGACTGTCGCATATATGG 59.437 50.000 14.51 5.05 42.94 2.74
448 449 2.826128 GGGAGACTGTCGCATATATGGA 59.174 50.000 14.51 7.23 38.04 3.41
449 450 3.119316 GGGAGACTGTCGCATATATGGAG 60.119 52.174 14.51 2.85 38.04 3.86
450 451 3.508012 GGAGACTGTCGCATATATGGAGT 59.492 47.826 14.51 5.59 0.00 3.85
451 452 4.021894 GGAGACTGTCGCATATATGGAGTT 60.022 45.833 14.51 0.00 0.00 3.01
452 453 5.183331 GGAGACTGTCGCATATATGGAGTTA 59.817 44.000 14.51 0.59 0.00 2.24
453 454 6.260870 AGACTGTCGCATATATGGAGTTAG 57.739 41.667 14.51 10.10 0.00 2.34
454 455 5.184096 AGACTGTCGCATATATGGAGTTAGG 59.816 44.000 14.51 2.68 0.00 2.69
455 456 5.077564 ACTGTCGCATATATGGAGTTAGGA 58.922 41.667 14.51 0.00 0.00 2.94
456 457 5.717178 ACTGTCGCATATATGGAGTTAGGAT 59.283 40.000 14.51 0.00 0.00 3.24
457 458 5.965922 TGTCGCATATATGGAGTTAGGATG 58.034 41.667 14.51 0.00 0.00 3.51
458 459 4.806247 GTCGCATATATGGAGTTAGGATGC 59.194 45.833 14.51 0.00 35.88 3.91
459 460 4.466015 TCGCATATATGGAGTTAGGATGCA 59.534 41.667 14.51 0.00 38.45 3.96
460 461 4.807834 CGCATATATGGAGTTAGGATGCAG 59.192 45.833 14.51 0.00 38.45 4.41
461 462 4.574013 GCATATATGGAGTTAGGATGCAGC 59.426 45.833 14.51 0.00 38.43 5.25
462 463 5.737860 CATATATGGAGTTAGGATGCAGCA 58.262 41.667 3.51 0.00 0.00 4.41
463 464 4.712051 ATATGGAGTTAGGATGCAGCAA 57.288 40.909 3.51 0.00 0.00 3.91
464 465 2.877097 TGGAGTTAGGATGCAGCAAA 57.123 45.000 3.51 0.00 0.00 3.68
465 466 3.370840 TGGAGTTAGGATGCAGCAAAT 57.629 42.857 3.51 0.00 0.00 2.32
466 467 3.018856 TGGAGTTAGGATGCAGCAAATG 58.981 45.455 3.51 0.00 0.00 2.32
467 468 2.360165 GGAGTTAGGATGCAGCAAATGG 59.640 50.000 3.51 0.00 0.00 3.16
468 469 2.360165 GAGTTAGGATGCAGCAAATGGG 59.640 50.000 3.51 0.00 0.00 4.00
469 470 2.025037 AGTTAGGATGCAGCAAATGGGA 60.025 45.455 3.51 0.00 0.00 4.37
470 471 2.353357 TAGGATGCAGCAAATGGGAG 57.647 50.000 3.51 0.00 0.00 4.30
471 472 0.627451 AGGATGCAGCAAATGGGAGA 59.373 50.000 3.51 0.00 0.00 3.71
472 473 0.743097 GGATGCAGCAAATGGGAGAC 59.257 55.000 3.51 0.00 0.00 3.36
473 474 1.684248 GGATGCAGCAAATGGGAGACT 60.684 52.381 3.51 0.00 0.00 3.24
474 475 1.404391 GATGCAGCAAATGGGAGACTG 59.596 52.381 0.00 0.00 0.00 3.51
475 476 0.111061 TGCAGCAAATGGGAGACTGT 59.889 50.000 0.00 0.00 0.00 3.55
476 477 0.807496 GCAGCAAATGGGAGACTGTC 59.193 55.000 0.00 0.00 0.00 3.51
477 478 1.081892 CAGCAAATGGGAGACTGTCG 58.918 55.000 1.52 0.00 0.00 4.35
478 479 0.674895 AGCAAATGGGAGACTGTCGC 60.675 55.000 2.68 2.68 38.63 5.19
609 610 0.030101 CTCAGCCGCGAAAAACCAAA 59.970 50.000 8.23 0.00 0.00 3.28
1084 1743 2.930562 GCCCCTCCCACACACTCT 60.931 66.667 0.00 0.00 0.00 3.24
1527 2216 2.283676 AGGCGGAAGGACGGAGAA 60.284 61.111 0.00 0.00 0.00 2.87
1973 2666 3.750130 CAGTGAGAACTGAGATTTGGGTG 59.250 47.826 0.00 0.00 39.99 4.61
2284 3946 4.274459 CACCTCAAAGAACACCTTCTTCTG 59.726 45.833 0.00 0.00 44.59 3.02
3126 5164 3.720949 CGTCTTACATTATGGGACGGA 57.279 47.619 20.50 2.30 43.69 4.69
3127 5165 3.639538 CGTCTTACATTATGGGACGGAG 58.360 50.000 20.50 2.74 43.69 4.63
3128 5166 3.552273 CGTCTTACATTATGGGACGGAGG 60.552 52.174 20.50 5.87 43.69 4.30
3129 5167 2.969950 TCTTACATTATGGGACGGAGGG 59.030 50.000 0.00 0.00 0.00 4.30
3130 5168 2.779429 TACATTATGGGACGGAGGGA 57.221 50.000 0.00 0.00 0.00 4.20
3131 5169 1.424638 ACATTATGGGACGGAGGGAG 58.575 55.000 0.00 0.00 0.00 4.30
3132 5170 1.344087 ACATTATGGGACGGAGGGAGT 60.344 52.381 0.00 0.00 0.00 3.85
3133 5171 2.090943 ACATTATGGGACGGAGGGAGTA 60.091 50.000 0.00 0.00 0.00 2.59
3134 5172 2.852714 TTATGGGACGGAGGGAGTAA 57.147 50.000 0.00 0.00 0.00 2.24
3135 5173 3.339713 TTATGGGACGGAGGGAGTAAT 57.660 47.619 0.00 0.00 0.00 1.89
3136 5174 4.474303 TTATGGGACGGAGGGAGTAATA 57.526 45.455 0.00 0.00 0.00 0.98
3379 5449 5.601662 AGATTCCACTATGAACCACATACG 58.398 41.667 0.00 0.00 40.07 3.06
3436 5506 7.833786 TCACTCATTTTACTCCGTATGTAGTT 58.166 34.615 0.00 0.00 0.00 2.24
3515 5585 5.616866 GCAGCAATTTAGAACTAAGACGCAA 60.617 40.000 0.00 0.00 0.00 4.85
3630 5700 9.393249 CTCAAGATTTTTAGTTTGCACGATTTA 57.607 29.630 0.00 0.00 0.00 1.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.630940 CCACATGTTTATGTTTGGGATTGC 59.369 41.667 0.00 0.00 45.01 3.56
1 2 6.035368 TCCACATGTTTATGTTTGGGATTG 57.965 37.500 0.00 0.00 45.01 2.67
2 3 6.496565 TCTTCCACATGTTTATGTTTGGGATT 59.503 34.615 0.00 0.00 45.01 3.01
3 4 6.015918 TCTTCCACATGTTTATGTTTGGGAT 58.984 36.000 0.00 0.00 45.01 3.85
4 5 5.389520 TCTTCCACATGTTTATGTTTGGGA 58.610 37.500 0.00 0.00 45.01 4.37
6 7 5.634859 GCTTCTTCCACATGTTTATGTTTGG 59.365 40.000 0.00 0.00 45.01 3.28
8 9 6.568462 CGAGCTTCTTCCACATGTTTATGTTT 60.568 38.462 0.00 0.00 45.01 2.83
9 10 5.106555 CGAGCTTCTTCCACATGTTTATGTT 60.107 40.000 0.00 0.00 45.01 2.71
11 12 4.393062 ACGAGCTTCTTCCACATGTTTATG 59.607 41.667 0.00 0.00 40.24 1.90
12 13 4.393062 CACGAGCTTCTTCCACATGTTTAT 59.607 41.667 0.00 0.00 0.00 1.40
13 14 3.745975 CACGAGCTTCTTCCACATGTTTA 59.254 43.478 0.00 0.00 0.00 2.01
14 15 2.549754 CACGAGCTTCTTCCACATGTTT 59.450 45.455 0.00 0.00 0.00 2.83
15 16 2.146342 CACGAGCTTCTTCCACATGTT 58.854 47.619 0.00 0.00 0.00 2.71
16 17 1.800805 CACGAGCTTCTTCCACATGT 58.199 50.000 0.00 0.00 0.00 3.21
17 18 0.445436 GCACGAGCTTCTTCCACATG 59.555 55.000 0.00 0.00 37.91 3.21
18 19 2.846371 GCACGAGCTTCTTCCACAT 58.154 52.632 0.00 0.00 37.91 3.21
19 20 4.361253 GCACGAGCTTCTTCCACA 57.639 55.556 0.00 0.00 37.91 4.17
23 24 9.653563 TAGGTTACCTTAAGCACGAGCTTCTTC 62.654 44.444 23.46 8.38 45.70 2.87
24 25 7.974272 TAGGTTACCTTAAGCACGAGCTTCTT 61.974 42.308 23.46 8.99 45.70 2.52
25 26 6.560182 TAGGTTACCTTAAGCACGAGCTTCT 61.560 44.000 23.46 13.64 45.70 2.85
26 27 4.381292 TAGGTTACCTTAAGCACGAGCTTC 60.381 45.833 23.46 7.44 45.70 3.86
28 29 3.094572 TAGGTTACCTTAAGCACGAGCT 58.905 45.455 10.01 0.00 44.00 4.09
29 30 2.381725 AGGTTACCTTAAGCACGAGC 57.618 50.000 0.00 0.00 38.57 5.03
30 31 5.067413 TGAGATAGGTTACCTTAAGCACGAG 59.933 44.000 10.01 0.00 38.57 4.18
31 32 4.951715 TGAGATAGGTTACCTTAAGCACGA 59.048 41.667 10.01 0.00 38.57 4.35
32 33 5.258456 TGAGATAGGTTACCTTAAGCACG 57.742 43.478 10.01 0.00 38.57 5.34
33 34 6.641474 ACTTGAGATAGGTTACCTTAAGCAC 58.359 40.000 10.01 0.00 38.57 4.40
34 35 6.869206 ACTTGAGATAGGTTACCTTAAGCA 57.131 37.500 10.01 0.81 38.57 3.91
35 36 7.414208 GCAAACTTGAGATAGGTTACCTTAAGC 60.414 40.741 10.01 0.00 34.61 3.09
36 37 7.606456 TGCAAACTTGAGATAGGTTACCTTAAG 59.394 37.037 10.01 9.37 34.61 1.85
37 38 7.389607 GTGCAAACTTGAGATAGGTTACCTTAA 59.610 37.037 10.01 0.00 34.61 1.85
38 39 6.877322 GTGCAAACTTGAGATAGGTTACCTTA 59.123 38.462 10.01 0.00 34.61 2.69
39 40 5.705905 GTGCAAACTTGAGATAGGTTACCTT 59.294 40.000 10.01 0.00 34.61 3.50
40 41 5.221843 TGTGCAAACTTGAGATAGGTTACCT 60.222 40.000 9.57 9.57 37.71 3.08
41 42 5.001232 TGTGCAAACTTGAGATAGGTTACC 58.999 41.667 0.00 0.00 0.00 2.85
42 43 6.371548 TCATGTGCAAACTTGAGATAGGTTAC 59.628 38.462 0.00 0.00 0.00 2.50
43 44 6.472016 TCATGTGCAAACTTGAGATAGGTTA 58.528 36.000 0.00 0.00 0.00 2.85
44 45 5.316167 TCATGTGCAAACTTGAGATAGGTT 58.684 37.500 0.00 0.00 0.00 3.50
45 46 4.910195 TCATGTGCAAACTTGAGATAGGT 58.090 39.130 0.00 0.00 0.00 3.08
46 47 5.645067 TCTTCATGTGCAAACTTGAGATAGG 59.355 40.000 0.00 0.00 0.00 2.57
47 48 6.541086 GTCTTCATGTGCAAACTTGAGATAG 58.459 40.000 0.00 0.00 0.00 2.08
48 49 5.120674 CGTCTTCATGTGCAAACTTGAGATA 59.879 40.000 0.00 0.00 0.00 1.98
49 50 4.083643 CGTCTTCATGTGCAAACTTGAGAT 60.084 41.667 0.00 0.00 0.00 2.75
50 51 3.248363 CGTCTTCATGTGCAAACTTGAGA 59.752 43.478 0.00 0.00 0.00 3.27
51 52 3.248363 TCGTCTTCATGTGCAAACTTGAG 59.752 43.478 0.00 0.00 0.00 3.02
52 53 3.002246 GTCGTCTTCATGTGCAAACTTGA 59.998 43.478 0.00 0.00 0.00 3.02
53 54 3.242706 TGTCGTCTTCATGTGCAAACTTG 60.243 43.478 0.00 0.00 0.00 3.16
54 55 2.942376 TGTCGTCTTCATGTGCAAACTT 59.058 40.909 0.00 0.00 0.00 2.66
55 56 2.560504 TGTCGTCTTCATGTGCAAACT 58.439 42.857 0.00 0.00 0.00 2.66
56 57 3.482786 GATGTCGTCTTCATGTGCAAAC 58.517 45.455 0.00 0.00 0.00 2.93
57 58 2.483877 GGATGTCGTCTTCATGTGCAAA 59.516 45.455 0.00 0.00 0.00 3.68
58 59 2.076100 GGATGTCGTCTTCATGTGCAA 58.924 47.619 0.00 0.00 0.00 4.08
59 60 1.001860 TGGATGTCGTCTTCATGTGCA 59.998 47.619 0.00 0.00 0.00 4.57
60 61 1.394917 GTGGATGTCGTCTTCATGTGC 59.605 52.381 0.00 0.00 0.00 4.57
61 62 2.413112 GTGTGGATGTCGTCTTCATGTG 59.587 50.000 0.00 0.00 0.00 3.21
62 63 2.612972 GGTGTGGATGTCGTCTTCATGT 60.613 50.000 0.00 0.00 0.00 3.21
63 64 2.002586 GGTGTGGATGTCGTCTTCATG 58.997 52.381 0.00 0.00 0.00 3.07
64 65 1.404181 CGGTGTGGATGTCGTCTTCAT 60.404 52.381 0.00 0.00 0.00 2.57
65 66 0.038618 CGGTGTGGATGTCGTCTTCA 60.039 55.000 0.00 0.00 0.00 3.02
66 67 0.736325 CCGGTGTGGATGTCGTCTTC 60.736 60.000 0.00 0.00 42.00 2.87
67 68 1.292223 CCGGTGTGGATGTCGTCTT 59.708 57.895 0.00 0.00 42.00 3.01
68 69 0.609957 TACCGGTGTGGATGTCGTCT 60.610 55.000 19.93 0.00 42.00 4.18
69 70 0.244450 TTACCGGTGTGGATGTCGTC 59.756 55.000 19.93 0.00 42.00 4.20
70 71 0.245539 CTTACCGGTGTGGATGTCGT 59.754 55.000 19.93 0.00 42.00 4.34
71 72 0.528924 TCTTACCGGTGTGGATGTCG 59.471 55.000 19.93 0.00 42.00 4.35
72 73 2.981859 ATCTTACCGGTGTGGATGTC 57.018 50.000 19.93 0.00 42.00 3.06
73 74 3.709653 ACATATCTTACCGGTGTGGATGT 59.290 43.478 19.93 16.46 42.00 3.06
74 75 4.336889 ACATATCTTACCGGTGTGGATG 57.663 45.455 19.93 15.82 42.00 3.51
75 76 4.282703 GGTACATATCTTACCGGTGTGGAT 59.717 45.833 19.93 18.71 42.00 3.41
76 77 3.638160 GGTACATATCTTACCGGTGTGGA 59.362 47.826 19.93 12.77 42.00 4.02
77 78 3.640029 AGGTACATATCTTACCGGTGTGG 59.360 47.826 19.93 7.17 43.45 4.17
78 79 4.931661 AGGTACATATCTTACCGGTGTG 57.068 45.455 19.93 10.01 43.45 3.82
79 80 5.450965 CGAAAGGTACATATCTTACCGGTGT 60.451 44.000 19.93 7.15 43.45 4.16
80 81 4.980434 CGAAAGGTACATATCTTACCGGTG 59.020 45.833 19.93 0.15 43.45 4.94
81 82 4.646492 ACGAAAGGTACATATCTTACCGGT 59.354 41.667 13.98 13.98 43.45 5.28
82 83 4.980434 CACGAAAGGTACATATCTTACCGG 59.020 45.833 0.00 0.00 43.45 5.28
83 84 5.824429 TCACGAAAGGTACATATCTTACCG 58.176 41.667 0.00 5.57 43.45 4.02
84 85 8.658499 ATTTCACGAAAGGTACATATCTTACC 57.342 34.615 0.00 2.77 39.59 2.85
85 86 8.477709 CGATTTCACGAAAGGTACATATCTTAC 58.522 37.037 0.00 0.00 33.32 2.34
86 87 8.192774 ACGATTTCACGAAAGGTACATATCTTA 58.807 33.333 0.00 0.00 37.03 2.10
87 88 7.010183 CACGATTTCACGAAAGGTACATATCTT 59.990 37.037 0.00 0.00 37.03 2.40
88 89 6.475727 CACGATTTCACGAAAGGTACATATCT 59.524 38.462 0.00 0.00 37.03 1.98
89 90 6.637365 CACGATTTCACGAAAGGTACATATC 58.363 40.000 0.00 0.00 37.03 1.63
90 91 5.006358 GCACGATTTCACGAAAGGTACATAT 59.994 40.000 0.00 0.00 37.03 1.78
91 92 4.327898 GCACGATTTCACGAAAGGTACATA 59.672 41.667 0.00 0.00 37.03 2.29
92 93 3.124636 GCACGATTTCACGAAAGGTACAT 59.875 43.478 0.00 0.00 37.03 2.29
93 94 2.477375 GCACGATTTCACGAAAGGTACA 59.523 45.455 0.00 0.00 37.03 2.90
94 95 2.159747 GGCACGATTTCACGAAAGGTAC 60.160 50.000 0.00 0.00 37.03 3.34
95 96 2.070783 GGCACGATTTCACGAAAGGTA 58.929 47.619 0.00 0.00 37.03 3.08
96 97 0.872388 GGCACGATTTCACGAAAGGT 59.128 50.000 0.00 0.00 37.03 3.50
97 98 3.676091 GGCACGATTTCACGAAAGG 57.324 52.632 0.00 0.00 37.03 3.11
111 112 1.442526 CCCATCTGCTTCATCGGCAC 61.443 60.000 0.00 0.00 35.71 5.01
112 113 1.153107 CCCATCTGCTTCATCGGCA 60.153 57.895 0.00 0.00 38.10 5.69
113 114 1.895707 CCCCATCTGCTTCATCGGC 60.896 63.158 0.00 0.00 0.00 5.54
114 115 0.181114 TTCCCCATCTGCTTCATCGG 59.819 55.000 0.00 0.00 0.00 4.18
115 116 1.590932 CTTCCCCATCTGCTTCATCG 58.409 55.000 0.00 0.00 0.00 3.84
116 117 1.133853 AGCTTCCCCATCTGCTTCATC 60.134 52.381 0.00 0.00 30.96 2.92
117 118 0.924823 AGCTTCCCCATCTGCTTCAT 59.075 50.000 0.00 0.00 30.96 2.57
118 119 0.034767 CAGCTTCCCCATCTGCTTCA 60.035 55.000 0.00 0.00 33.03 3.02
119 120 0.254178 TCAGCTTCCCCATCTGCTTC 59.746 55.000 0.00 0.00 33.03 3.86
120 121 0.924823 ATCAGCTTCCCCATCTGCTT 59.075 50.000 0.00 0.00 33.03 3.91
121 122 0.183014 CATCAGCTTCCCCATCTGCT 59.817 55.000 0.00 0.00 36.04 4.24
122 123 0.822532 CCATCAGCTTCCCCATCTGC 60.823 60.000 0.00 0.00 0.00 4.26
123 124 0.841961 TCCATCAGCTTCCCCATCTG 59.158 55.000 0.00 0.00 0.00 2.90
124 125 0.842635 GTCCATCAGCTTCCCCATCT 59.157 55.000 0.00 0.00 0.00 2.90
125 126 0.533755 CGTCCATCAGCTTCCCCATC 60.534 60.000 0.00 0.00 0.00 3.51
126 127 1.274703 ACGTCCATCAGCTTCCCCAT 61.275 55.000 0.00 0.00 0.00 4.00
127 128 1.918293 ACGTCCATCAGCTTCCCCA 60.918 57.895 0.00 0.00 0.00 4.96
128 129 1.450312 CACGTCCATCAGCTTCCCC 60.450 63.158 0.00 0.00 0.00 4.81
129 130 1.450312 CCACGTCCATCAGCTTCCC 60.450 63.158 0.00 0.00 0.00 3.97
130 131 2.109126 GCCACGTCCATCAGCTTCC 61.109 63.158 0.00 0.00 0.00 3.46
131 132 0.745845 ATGCCACGTCCATCAGCTTC 60.746 55.000 0.00 0.00 0.00 3.86
132 133 0.541392 TATGCCACGTCCATCAGCTT 59.459 50.000 1.76 0.00 0.00 3.74
133 134 0.179073 GTATGCCACGTCCATCAGCT 60.179 55.000 1.76 0.00 0.00 4.24
134 135 0.179073 AGTATGCCACGTCCATCAGC 60.179 55.000 1.76 0.00 0.00 4.26
135 136 2.545952 GGTAGTATGCCACGTCCATCAG 60.546 54.545 1.76 0.00 42.29 2.90
136 137 1.411246 GGTAGTATGCCACGTCCATCA 59.589 52.381 1.76 0.00 42.29 3.07
137 138 1.270147 GGGTAGTATGCCACGTCCATC 60.270 57.143 1.76 0.00 45.88 3.51
138 139 0.756903 GGGTAGTATGCCACGTCCAT 59.243 55.000 3.94 3.94 45.88 3.41
139 140 1.332144 GGGGTAGTATGCCACGTCCA 61.332 60.000 0.00 0.00 45.88 4.02
140 141 1.444672 GGGGTAGTATGCCACGTCC 59.555 63.158 0.00 0.00 45.88 4.79
145 146 2.439960 CGCAGGGGGTAGTATGCCA 61.440 63.158 0.00 0.00 45.88 4.92
146 147 1.481056 ATCGCAGGGGGTAGTATGCC 61.481 60.000 0.00 0.00 41.82 4.40
147 148 0.037232 GATCGCAGGGGGTAGTATGC 60.037 60.000 0.00 0.00 35.32 3.14
148 149 1.338107 TGATCGCAGGGGGTAGTATG 58.662 55.000 0.00 0.00 0.00 2.39
149 150 1.971357 CTTGATCGCAGGGGGTAGTAT 59.029 52.381 0.00 0.00 0.00 2.12
150 151 1.410004 CTTGATCGCAGGGGGTAGTA 58.590 55.000 0.00 0.00 0.00 1.82
151 152 1.972660 GCTTGATCGCAGGGGGTAGT 61.973 60.000 0.00 0.00 0.00 2.73
152 153 1.227674 GCTTGATCGCAGGGGGTAG 60.228 63.158 0.00 0.00 0.00 3.18
153 154 1.689233 AGCTTGATCGCAGGGGGTA 60.689 57.895 0.00 0.00 0.00 3.69
154 155 3.011517 AGCTTGATCGCAGGGGGT 61.012 61.111 0.00 0.00 0.00 4.95
155 156 2.515523 CAGCTTGATCGCAGGGGG 60.516 66.667 0.00 0.00 0.00 5.40
156 157 3.207669 GCAGCTTGATCGCAGGGG 61.208 66.667 0.00 0.00 0.00 4.79
157 158 3.570638 CGCAGCTTGATCGCAGGG 61.571 66.667 0.00 0.00 0.00 4.45
158 159 3.570638 CCGCAGCTTGATCGCAGG 61.571 66.667 0.00 0.00 0.00 4.85
159 160 2.816958 ACCGCAGCTTGATCGCAG 60.817 61.111 0.00 0.00 0.00 5.18
160 161 3.120385 CACCGCAGCTTGATCGCA 61.120 61.111 0.00 0.00 0.00 5.10
161 162 3.869272 CCACCGCAGCTTGATCGC 61.869 66.667 0.00 0.00 0.00 4.58
162 163 1.577328 AAACCACCGCAGCTTGATCG 61.577 55.000 0.00 0.00 0.00 3.69
163 164 0.109597 CAAACCACCGCAGCTTGATC 60.110 55.000 0.00 0.00 0.00 2.92
164 165 1.526575 CCAAACCACCGCAGCTTGAT 61.527 55.000 0.00 0.00 0.00 2.57
165 166 2.192861 CCAAACCACCGCAGCTTGA 61.193 57.895 0.00 0.00 0.00 3.02
166 167 2.336088 CCAAACCACCGCAGCTTG 59.664 61.111 0.00 0.00 0.00 4.01
167 168 3.605664 GCCAAACCACCGCAGCTT 61.606 61.111 0.00 0.00 0.00 3.74
170 171 3.726517 CTCGCCAAACCACCGCAG 61.727 66.667 0.00 0.00 0.00 5.18
171 172 3.758973 TTCTCGCCAAACCACCGCA 62.759 57.895 0.00 0.00 0.00 5.69
172 173 2.975799 TTCTCGCCAAACCACCGC 60.976 61.111 0.00 0.00 0.00 5.68
173 174 1.841663 CTGTTCTCGCCAAACCACCG 61.842 60.000 0.00 0.00 0.00 4.94
174 175 1.949257 CTGTTCTCGCCAAACCACC 59.051 57.895 0.00 0.00 0.00 4.61
175 176 1.282875 GCTGTTCTCGCCAAACCAC 59.717 57.895 0.00 0.00 0.00 4.16
176 177 2.250939 CGCTGTTCTCGCCAAACCA 61.251 57.895 0.00 0.00 0.00 3.67
177 178 2.556287 CGCTGTTCTCGCCAAACC 59.444 61.111 0.00 0.00 0.00 3.27
178 179 2.556287 CCGCTGTTCTCGCCAAAC 59.444 61.111 0.00 0.00 0.00 2.93
179 180 2.463589 ATCCCGCTGTTCTCGCCAAA 62.464 55.000 0.00 0.00 0.00 3.28
180 181 2.852495 GATCCCGCTGTTCTCGCCAA 62.852 60.000 0.00 0.00 0.00 4.52
181 182 3.371097 GATCCCGCTGTTCTCGCCA 62.371 63.158 0.00 0.00 0.00 5.69
182 183 2.579684 AAGATCCCGCTGTTCTCGCC 62.580 60.000 0.00 0.00 0.00 5.54
183 184 1.153549 AAGATCCCGCTGTTCTCGC 60.154 57.895 0.00 0.00 0.00 5.03
184 185 0.108615 ACAAGATCCCGCTGTTCTCG 60.109 55.000 0.00 0.00 0.00 4.04
185 186 2.100605 AACAAGATCCCGCTGTTCTC 57.899 50.000 0.00 0.00 0.00 2.87
186 187 3.914426 ATAACAAGATCCCGCTGTTCT 57.086 42.857 4.02 0.00 0.00 3.01
187 188 3.938963 TGAATAACAAGATCCCGCTGTTC 59.061 43.478 4.02 0.00 0.00 3.18
188 189 3.689649 GTGAATAACAAGATCCCGCTGTT 59.310 43.478 0.00 0.00 0.00 3.16
189 190 3.270877 GTGAATAACAAGATCCCGCTGT 58.729 45.455 0.00 0.00 0.00 4.40
190 191 2.614057 GGTGAATAACAAGATCCCGCTG 59.386 50.000 0.00 0.00 0.00 5.18
191 192 2.238646 TGGTGAATAACAAGATCCCGCT 59.761 45.455 0.00 0.00 0.00 5.52
192 193 2.639065 TGGTGAATAACAAGATCCCGC 58.361 47.619 0.00 0.00 0.00 6.13
193 194 3.565482 CCATGGTGAATAACAAGATCCCG 59.435 47.826 2.57 0.00 0.00 5.14
194 195 3.891366 CCCATGGTGAATAACAAGATCCC 59.109 47.826 11.73 0.00 0.00 3.85
195 196 4.792068 TCCCATGGTGAATAACAAGATCC 58.208 43.478 11.73 0.00 0.00 3.36
196 197 5.684704 TCTCCCATGGTGAATAACAAGATC 58.315 41.667 11.73 0.00 0.00 2.75
197 198 5.192522 ACTCTCCCATGGTGAATAACAAGAT 59.807 40.000 11.73 0.00 0.00 2.40
198 199 4.536090 ACTCTCCCATGGTGAATAACAAGA 59.464 41.667 11.73 0.00 0.00 3.02
199 200 4.637534 CACTCTCCCATGGTGAATAACAAG 59.362 45.833 11.73 0.00 33.32 3.16
200 201 4.042809 ACACTCTCCCATGGTGAATAACAA 59.957 41.667 11.73 0.00 35.28 2.83
201 202 3.587061 ACACTCTCCCATGGTGAATAACA 59.413 43.478 11.73 0.00 35.28 2.41
202 203 4.222124 ACACTCTCCCATGGTGAATAAC 57.778 45.455 11.73 0.00 35.28 1.89
203 204 4.141711 GCTACACTCTCCCATGGTGAATAA 60.142 45.833 11.73 0.00 35.28 1.40
204 205 3.388024 GCTACACTCTCCCATGGTGAATA 59.612 47.826 11.73 1.61 35.28 1.75
205 206 2.171448 GCTACACTCTCCCATGGTGAAT 59.829 50.000 11.73 0.00 35.28 2.57
206 207 1.555075 GCTACACTCTCCCATGGTGAA 59.445 52.381 11.73 0.00 35.28 3.18
207 208 1.195115 GCTACACTCTCCCATGGTGA 58.805 55.000 11.73 7.73 35.28 4.02
208 209 0.179100 CGCTACACTCTCCCATGGTG 60.179 60.000 11.73 4.22 37.05 4.17
209 210 1.330655 CCGCTACACTCTCCCATGGT 61.331 60.000 11.73 0.00 0.00 3.55
210 211 1.443407 CCGCTACACTCTCCCATGG 59.557 63.158 4.14 4.14 0.00 3.66
211 212 1.443407 CCCGCTACACTCTCCCATG 59.557 63.158 0.00 0.00 0.00 3.66
212 213 2.435693 GCCCGCTACACTCTCCCAT 61.436 63.158 0.00 0.00 0.00 4.00
213 214 3.075005 GCCCGCTACACTCTCCCA 61.075 66.667 0.00 0.00 0.00 4.37
214 215 3.075005 TGCCCGCTACACTCTCCC 61.075 66.667 0.00 0.00 0.00 4.30
215 216 2.167398 TTGTGCCCGCTACACTCTCC 62.167 60.000 0.00 0.00 38.86 3.71
216 217 1.014564 GTTGTGCCCGCTACACTCTC 61.015 60.000 0.00 0.00 38.86 3.20
217 218 1.004918 GTTGTGCCCGCTACACTCT 60.005 57.895 0.00 0.00 38.86 3.24
218 219 2.380410 CGTTGTGCCCGCTACACTC 61.380 63.158 0.00 0.00 38.86 3.51
219 220 2.357034 CGTTGTGCCCGCTACACT 60.357 61.111 0.00 0.00 38.86 3.55
220 221 3.419759 CCGTTGTGCCCGCTACAC 61.420 66.667 0.00 0.00 38.55 2.90
226 227 4.690719 TAGGTGCCGTTGTGCCCG 62.691 66.667 0.00 0.00 0.00 6.13
227 228 3.053896 GTAGGTGCCGTTGTGCCC 61.054 66.667 0.00 0.00 0.00 5.36
228 229 1.674322 ATGTAGGTGCCGTTGTGCC 60.674 57.895 0.00 0.00 0.00 5.01
229 230 1.234615 ACATGTAGGTGCCGTTGTGC 61.235 55.000 0.00 0.00 0.00 4.57
230 231 1.069296 CAACATGTAGGTGCCGTTGTG 60.069 52.381 0.00 0.00 33.84 3.33
231 232 1.202710 TCAACATGTAGGTGCCGTTGT 60.203 47.619 0.00 0.00 38.44 3.32
232 233 1.518325 TCAACATGTAGGTGCCGTTG 58.482 50.000 0.00 0.00 38.60 4.10
233 234 1.877443 GTTCAACATGTAGGTGCCGTT 59.123 47.619 0.00 0.00 33.90 4.44
234 235 1.519408 GTTCAACATGTAGGTGCCGT 58.481 50.000 0.00 0.00 33.90 5.68
235 236 0.802494 GGTTCAACATGTAGGTGCCG 59.198 55.000 0.00 0.00 33.90 5.69
236 237 2.200373 AGGTTCAACATGTAGGTGCC 57.800 50.000 0.00 0.00 33.90 5.01
237 238 2.159627 CGAAGGTTCAACATGTAGGTGC 59.840 50.000 0.00 0.00 33.90 5.01
255 256 0.395312 GTCAACCACTTCCTCCCGAA 59.605 55.000 0.00 0.00 0.00 4.30
256 257 0.761323 TGTCAACCACTTCCTCCCGA 60.761 55.000 0.00 0.00 0.00 5.14
257 258 0.107831 TTGTCAACCACTTCCTCCCG 59.892 55.000 0.00 0.00 0.00 5.14
258 259 1.545651 CCTTGTCAACCACTTCCTCCC 60.546 57.143 0.00 0.00 0.00 4.30
259 260 1.143073 ACCTTGTCAACCACTTCCTCC 59.857 52.381 0.00 0.00 0.00 4.30
260 261 2.222027 CACCTTGTCAACCACTTCCTC 58.778 52.381 0.00 0.00 0.00 3.71
261 262 1.133792 CCACCTTGTCAACCACTTCCT 60.134 52.381 0.00 0.00 0.00 3.36
262 263 1.318576 CCACCTTGTCAACCACTTCC 58.681 55.000 0.00 0.00 0.00 3.46
263 264 0.668535 GCCACCTTGTCAACCACTTC 59.331 55.000 0.00 0.00 0.00 3.01
264 265 0.033601 TGCCACCTTGTCAACCACTT 60.034 50.000 0.00 0.00 0.00 3.16
265 266 0.466189 CTGCCACCTTGTCAACCACT 60.466 55.000 0.00 0.00 0.00 4.00
266 267 1.455383 CCTGCCACCTTGTCAACCAC 61.455 60.000 0.00 0.00 0.00 4.16
267 268 1.152777 CCTGCCACCTTGTCAACCA 60.153 57.895 0.00 0.00 0.00 3.67
268 269 2.564721 GCCTGCCACCTTGTCAACC 61.565 63.158 0.00 0.00 0.00 3.77
269 270 2.908073 CGCCTGCCACCTTGTCAAC 61.908 63.158 0.00 0.00 0.00 3.18
270 271 2.594303 CGCCTGCCACCTTGTCAA 60.594 61.111 0.00 0.00 0.00 3.18
271 272 3.535629 CTCGCCTGCCACCTTGTCA 62.536 63.158 0.00 0.00 0.00 3.58
272 273 2.743928 CTCGCCTGCCACCTTGTC 60.744 66.667 0.00 0.00 0.00 3.18
273 274 4.335647 CCTCGCCTGCCACCTTGT 62.336 66.667 0.00 0.00 0.00 3.16
282 283 3.710722 AAGAGTGCCCCTCGCCTG 61.711 66.667 0.00 0.00 45.44 4.85
283 284 3.710722 CAAGAGTGCCCCTCGCCT 61.711 66.667 0.00 0.00 45.44 5.52
284 285 4.785453 CCAAGAGTGCCCCTCGCC 62.785 72.222 0.00 0.00 45.44 5.54
285 286 2.543067 ATTCCAAGAGTGCCCCTCGC 62.543 60.000 0.00 0.00 45.44 5.03
286 287 0.830648 TATTCCAAGAGTGCCCCTCG 59.169 55.000 0.00 0.00 45.44 4.63
287 288 2.644676 GTTATTCCAAGAGTGCCCCTC 58.355 52.381 0.00 0.00 40.80 4.30
288 289 1.285078 GGTTATTCCAAGAGTGCCCCT 59.715 52.381 0.00 0.00 35.97 4.79
289 290 1.285078 AGGTTATTCCAAGAGTGCCCC 59.715 52.381 0.00 0.00 39.02 5.80
290 291 2.369394 CAGGTTATTCCAAGAGTGCCC 58.631 52.381 0.00 0.00 39.02 5.36
291 292 1.745653 GCAGGTTATTCCAAGAGTGCC 59.254 52.381 0.00 0.00 39.02 5.01
292 293 2.162408 GTGCAGGTTATTCCAAGAGTGC 59.838 50.000 0.00 0.00 39.02 4.40
293 294 2.416547 CGTGCAGGTTATTCCAAGAGTG 59.583 50.000 0.00 0.00 39.02 3.51
294 295 2.615493 CCGTGCAGGTTATTCCAAGAGT 60.615 50.000 5.57 0.00 39.02 3.24
295 296 2.009774 CCGTGCAGGTTATTCCAAGAG 58.990 52.381 5.57 0.00 39.02 2.85
296 297 1.339631 CCCGTGCAGGTTATTCCAAGA 60.340 52.381 5.57 0.00 38.74 3.02
297 298 1.094785 CCCGTGCAGGTTATTCCAAG 58.905 55.000 5.57 0.00 38.74 3.61
298 299 0.402504 ACCCGTGCAGGTTATTCCAA 59.597 50.000 5.57 0.00 36.44 3.53
299 300 1.277579 TACCCGTGCAGGTTATTCCA 58.722 50.000 2.55 0.00 41.58 3.53
300 301 2.158871 TCATACCCGTGCAGGTTATTCC 60.159 50.000 2.55 0.00 41.58 3.01
301 302 3.131396 CTCATACCCGTGCAGGTTATTC 58.869 50.000 2.55 0.00 41.58 1.75
302 303 2.769663 TCTCATACCCGTGCAGGTTATT 59.230 45.455 2.55 0.00 41.58 1.40
303 304 2.394632 TCTCATACCCGTGCAGGTTAT 58.605 47.619 2.55 0.00 41.58 1.89
304 305 1.855295 TCTCATACCCGTGCAGGTTA 58.145 50.000 2.55 0.00 41.58 2.85
305 306 1.134401 CATCTCATACCCGTGCAGGTT 60.134 52.381 2.55 0.00 41.58 3.50
306 307 0.465705 CATCTCATACCCGTGCAGGT 59.534 55.000 5.57 4.14 44.37 4.00
307 308 0.250038 CCATCTCATACCCGTGCAGG 60.250 60.000 0.00 0.00 40.63 4.85
308 309 0.752658 TCCATCTCATACCCGTGCAG 59.247 55.000 0.00 0.00 0.00 4.41
309 310 1.423584 ATCCATCTCATACCCGTGCA 58.576 50.000 0.00 0.00 0.00 4.57
310 311 3.525537 CATATCCATCTCATACCCGTGC 58.474 50.000 0.00 0.00 0.00 5.34
311 312 3.679917 GCCATATCCATCTCATACCCGTG 60.680 52.174 0.00 0.00 0.00 4.94
312 313 2.501723 GCCATATCCATCTCATACCCGT 59.498 50.000 0.00 0.00 0.00 5.28
313 314 2.481969 CGCCATATCCATCTCATACCCG 60.482 54.545 0.00 0.00 0.00 5.28
314 315 2.158900 CCGCCATATCCATCTCATACCC 60.159 54.545 0.00 0.00 0.00 3.69
315 316 2.743183 GCCGCCATATCCATCTCATACC 60.743 54.545 0.00 0.00 0.00 2.73
316 317 2.093500 TGCCGCCATATCCATCTCATAC 60.093 50.000 0.00 0.00 0.00 2.39
317 318 2.187100 TGCCGCCATATCCATCTCATA 58.813 47.619 0.00 0.00 0.00 2.15
318 319 0.986527 TGCCGCCATATCCATCTCAT 59.013 50.000 0.00 0.00 0.00 2.90
319 320 0.986527 ATGCCGCCATATCCATCTCA 59.013 50.000 0.00 0.00 0.00 3.27
320 321 2.555199 GTATGCCGCCATATCCATCTC 58.445 52.381 0.00 0.00 36.40 2.75
321 322 1.210478 GGTATGCCGCCATATCCATCT 59.790 52.381 0.00 0.00 36.40 2.90
322 323 1.210478 AGGTATGCCGCCATATCCATC 59.790 52.381 0.00 0.00 35.98 3.51
323 324 1.289160 AGGTATGCCGCCATATCCAT 58.711 50.000 0.00 0.00 35.98 3.41
324 325 1.064003 AAGGTATGCCGCCATATCCA 58.936 50.000 0.00 0.00 35.98 3.41
325 326 1.453155 CAAGGTATGCCGCCATATCC 58.547 55.000 0.00 0.00 35.98 2.59
336 337 1.227263 CCGACGGAGGCAAGGTATG 60.227 63.158 8.64 0.00 0.00 2.39
337 338 3.217231 CCGACGGAGGCAAGGTAT 58.783 61.111 8.64 0.00 0.00 2.73
347 348 2.833582 GGATCTCTGGCCGACGGA 60.834 66.667 20.50 0.00 0.00 4.69
348 349 2.356818 GAAGGATCTCTGGCCGACGG 62.357 65.000 10.29 10.29 0.00 4.79
349 350 1.066587 GAAGGATCTCTGGCCGACG 59.933 63.158 0.00 0.00 0.00 5.12
350 351 0.179097 GTGAAGGATCTCTGGCCGAC 60.179 60.000 0.00 0.00 0.00 4.79
351 352 0.324738 AGTGAAGGATCTCTGGCCGA 60.325 55.000 0.00 0.00 0.00 5.54
352 353 0.539051 AAGTGAAGGATCTCTGGCCG 59.461 55.000 0.00 0.00 30.13 6.13
353 354 1.556911 TCAAGTGAAGGATCTCTGGCC 59.443 52.381 0.00 0.00 30.13 5.36
354 355 2.235898 ACTCAAGTGAAGGATCTCTGGC 59.764 50.000 0.00 0.00 30.13 4.85
367 368 2.654749 TCGGTATGCTCACTCAAGTG 57.345 50.000 3.69 3.69 46.91 3.16
368 369 2.159043 CCATCGGTATGCTCACTCAAGT 60.159 50.000 0.00 0.00 0.00 3.16
369 370 2.477825 CCATCGGTATGCTCACTCAAG 58.522 52.381 0.00 0.00 0.00 3.02
370 371 1.138859 CCCATCGGTATGCTCACTCAA 59.861 52.381 0.00 0.00 0.00 3.02
371 372 0.752658 CCCATCGGTATGCTCACTCA 59.247 55.000 0.00 0.00 0.00 3.41
372 373 1.000283 CTCCCATCGGTATGCTCACTC 60.000 57.143 0.00 0.00 0.00 3.51
373 374 1.043816 CTCCCATCGGTATGCTCACT 58.956 55.000 0.00 0.00 0.00 3.41
374 375 1.040646 TCTCCCATCGGTATGCTCAC 58.959 55.000 0.00 0.00 0.00 3.51
375 376 1.040646 GTCTCCCATCGGTATGCTCA 58.959 55.000 0.00 0.00 0.00 4.26
376 377 1.000283 CAGTCTCCCATCGGTATGCTC 60.000 57.143 0.00 0.00 0.00 4.26
377 378 1.043816 CAGTCTCCCATCGGTATGCT 58.956 55.000 0.00 0.00 0.00 3.79
378 379 0.753262 ACAGTCTCCCATCGGTATGC 59.247 55.000 0.00 0.00 0.00 3.14
379 380 1.001268 CGACAGTCTCCCATCGGTATG 60.001 57.143 0.00 0.00 0.00 2.39
380 381 1.319541 CGACAGTCTCCCATCGGTAT 58.680 55.000 0.00 0.00 0.00 2.73
381 382 1.381928 GCGACAGTCTCCCATCGGTA 61.382 60.000 0.00 0.00 35.15 4.02
382 383 2.711922 GCGACAGTCTCCCATCGGT 61.712 63.158 0.00 0.00 35.15 4.69
383 384 2.021068 ATGCGACAGTCTCCCATCGG 62.021 60.000 0.00 0.00 35.15 4.18
384 385 0.668535 TATGCGACAGTCTCCCATCG 59.331 55.000 0.00 0.00 37.63 3.84
385 386 4.428209 CATATATGCGACAGTCTCCCATC 58.572 47.826 0.00 0.00 0.00 3.51
386 387 3.196469 CCATATATGCGACAGTCTCCCAT 59.804 47.826 7.24 1.77 0.00 4.00
387 388 2.562738 CCATATATGCGACAGTCTCCCA 59.437 50.000 7.24 0.00 0.00 4.37
388 389 2.826128 TCCATATATGCGACAGTCTCCC 59.174 50.000 7.24 0.00 0.00 4.30
389 390 3.508012 ACTCCATATATGCGACAGTCTCC 59.492 47.826 7.24 0.00 0.00 3.71
390 391 4.775058 ACTCCATATATGCGACAGTCTC 57.225 45.455 7.24 0.00 0.00 3.36
391 392 5.184096 CCTAACTCCATATATGCGACAGTCT 59.816 44.000 7.24 1.70 0.00 3.24
392 393 5.183331 TCCTAACTCCATATATGCGACAGTC 59.817 44.000 7.24 0.00 0.00 3.51
393 394 5.077564 TCCTAACTCCATATATGCGACAGT 58.922 41.667 7.24 3.61 0.00 3.55
394 395 5.644977 TCCTAACTCCATATATGCGACAG 57.355 43.478 7.24 3.03 0.00 3.51
395 396 5.624509 GCATCCTAACTCCATATATGCGACA 60.625 44.000 7.24 0.00 0.00 4.35
396 397 4.806247 GCATCCTAACTCCATATATGCGAC 59.194 45.833 7.24 0.00 0.00 5.19
397 398 4.466015 TGCATCCTAACTCCATATATGCGA 59.534 41.667 7.24 5.61 40.78 5.10
398 399 4.758688 TGCATCCTAACTCCATATATGCG 58.241 43.478 7.24 3.27 40.78 4.73
399 400 4.574013 GCTGCATCCTAACTCCATATATGC 59.426 45.833 7.24 0.00 38.90 3.14
400 401 5.737860 TGCTGCATCCTAACTCCATATATG 58.262 41.667 5.68 5.68 0.00 1.78
401 402 6.378661 TTGCTGCATCCTAACTCCATATAT 57.621 37.500 1.84 0.00 0.00 0.86
402 403 5.823861 TTGCTGCATCCTAACTCCATATA 57.176 39.130 1.84 0.00 0.00 0.86
403 404 4.712051 TTGCTGCATCCTAACTCCATAT 57.288 40.909 1.84 0.00 0.00 1.78
404 405 4.502105 TTTGCTGCATCCTAACTCCATA 57.498 40.909 1.84 0.00 0.00 2.74
405 406 3.370840 TTTGCTGCATCCTAACTCCAT 57.629 42.857 1.84 0.00 0.00 3.41
406 407 2.877097 TTTGCTGCATCCTAACTCCA 57.123 45.000 1.84 0.00 0.00 3.86
407 408 2.360165 CCATTTGCTGCATCCTAACTCC 59.640 50.000 1.84 0.00 0.00 3.85
408 409 2.360165 CCCATTTGCTGCATCCTAACTC 59.640 50.000 1.84 0.00 0.00 3.01
409 410 2.025037 TCCCATTTGCTGCATCCTAACT 60.025 45.455 1.84 0.00 0.00 2.24
410 411 2.360165 CTCCCATTTGCTGCATCCTAAC 59.640 50.000 1.84 0.00 0.00 2.34
411 412 2.241941 TCTCCCATTTGCTGCATCCTAA 59.758 45.455 1.84 0.00 0.00 2.69
412 413 1.845791 TCTCCCATTTGCTGCATCCTA 59.154 47.619 1.84 0.00 0.00 2.94
413 414 0.627451 TCTCCCATTTGCTGCATCCT 59.373 50.000 1.84 0.00 0.00 3.24
414 415 0.743097 GTCTCCCATTTGCTGCATCC 59.257 55.000 1.84 0.00 0.00 3.51
415 416 1.404391 CAGTCTCCCATTTGCTGCATC 59.596 52.381 1.84 0.00 0.00 3.91
416 417 1.272313 ACAGTCTCCCATTTGCTGCAT 60.272 47.619 1.84 0.00 0.00 3.96
417 418 0.111061 ACAGTCTCCCATTTGCTGCA 59.889 50.000 0.00 0.00 0.00 4.41
418 419 0.807496 GACAGTCTCCCATTTGCTGC 59.193 55.000 0.00 0.00 0.00 5.25
419 420 1.081892 CGACAGTCTCCCATTTGCTG 58.918 55.000 0.00 0.00 0.00 4.41
420 421 0.674895 GCGACAGTCTCCCATTTGCT 60.675 55.000 0.00 0.00 0.00 3.91
421 422 0.955428 TGCGACAGTCTCCCATTTGC 60.955 55.000 0.00 0.00 0.00 3.68
422 423 1.742761 ATGCGACAGTCTCCCATTTG 58.257 50.000 0.00 0.00 0.00 2.32
423 424 3.845781 ATATGCGACAGTCTCCCATTT 57.154 42.857 0.00 0.00 0.00 2.32
424 425 4.323028 CCATATATGCGACAGTCTCCCATT 60.323 45.833 7.24 0.00 0.00 3.16
425 426 3.196469 CCATATATGCGACAGTCTCCCAT 59.804 47.826 7.24 1.77 0.00 4.00
426 427 2.562738 CCATATATGCGACAGTCTCCCA 59.437 50.000 7.24 0.00 0.00 4.37
427 428 2.826128 TCCATATATGCGACAGTCTCCC 59.174 50.000 7.24 0.00 0.00 4.30
428 429 3.508012 ACTCCATATATGCGACAGTCTCC 59.492 47.826 7.24 0.00 0.00 3.71
429 430 4.775058 ACTCCATATATGCGACAGTCTC 57.225 45.455 7.24 0.00 0.00 3.36
430 431 5.184096 CCTAACTCCATATATGCGACAGTCT 59.816 44.000 7.24 1.70 0.00 3.24
431 432 5.183331 TCCTAACTCCATATATGCGACAGTC 59.817 44.000 7.24 0.00 0.00 3.51
432 433 5.077564 TCCTAACTCCATATATGCGACAGT 58.922 41.667 7.24 3.61 0.00 3.55
433 434 5.644977 TCCTAACTCCATATATGCGACAG 57.355 43.478 7.24 3.03 0.00 3.51
434 435 5.624509 GCATCCTAACTCCATATATGCGACA 60.625 44.000 7.24 0.00 0.00 4.35
435 436 4.806247 GCATCCTAACTCCATATATGCGAC 59.194 45.833 7.24 0.00 0.00 5.19
436 437 4.466015 TGCATCCTAACTCCATATATGCGA 59.534 41.667 7.24 5.61 40.78 5.10
437 438 4.758688 TGCATCCTAACTCCATATATGCG 58.241 43.478 7.24 3.27 40.78 4.73
438 439 4.574013 GCTGCATCCTAACTCCATATATGC 59.426 45.833 7.24 0.00 38.90 3.14
439 440 5.737860 TGCTGCATCCTAACTCCATATATG 58.262 41.667 5.68 5.68 0.00 1.78
440 441 6.378661 TTGCTGCATCCTAACTCCATATAT 57.621 37.500 1.84 0.00 0.00 0.86
441 442 5.823861 TTGCTGCATCCTAACTCCATATA 57.176 39.130 1.84 0.00 0.00 0.86
442 443 4.712051 TTGCTGCATCCTAACTCCATAT 57.288 40.909 1.84 0.00 0.00 1.78
443 444 4.502105 TTTGCTGCATCCTAACTCCATA 57.498 40.909 1.84 0.00 0.00 2.74
444 445 3.370840 TTTGCTGCATCCTAACTCCAT 57.629 42.857 1.84 0.00 0.00 3.41
445 446 2.877097 TTTGCTGCATCCTAACTCCA 57.123 45.000 1.84 0.00 0.00 3.86
446 447 2.360165 CCATTTGCTGCATCCTAACTCC 59.640 50.000 1.84 0.00 0.00 3.85
447 448 2.360165 CCCATTTGCTGCATCCTAACTC 59.640 50.000 1.84 0.00 0.00 3.01
448 449 2.025037 TCCCATTTGCTGCATCCTAACT 60.025 45.455 1.84 0.00 0.00 2.24
449 450 2.360165 CTCCCATTTGCTGCATCCTAAC 59.640 50.000 1.84 0.00 0.00 2.34
450 451 2.241941 TCTCCCATTTGCTGCATCCTAA 59.758 45.455 1.84 0.00 0.00 2.69
451 452 1.845791 TCTCCCATTTGCTGCATCCTA 59.154 47.619 1.84 0.00 0.00 2.94
452 453 0.627451 TCTCCCATTTGCTGCATCCT 59.373 50.000 1.84 0.00 0.00 3.24
453 454 0.743097 GTCTCCCATTTGCTGCATCC 59.257 55.000 1.84 0.00 0.00 3.51
454 455 1.404391 CAGTCTCCCATTTGCTGCATC 59.596 52.381 1.84 0.00 0.00 3.91
455 456 1.272313 ACAGTCTCCCATTTGCTGCAT 60.272 47.619 1.84 0.00 0.00 3.96
456 457 0.111061 ACAGTCTCCCATTTGCTGCA 59.889 50.000 0.00 0.00 0.00 4.41
457 458 0.807496 GACAGTCTCCCATTTGCTGC 59.193 55.000 0.00 0.00 0.00 5.25
458 459 1.081892 CGACAGTCTCCCATTTGCTG 58.918 55.000 0.00 0.00 0.00 4.41
459 460 0.674895 GCGACAGTCTCCCATTTGCT 60.675 55.000 0.00 0.00 0.00 3.91
460 461 0.955428 TGCGACAGTCTCCCATTTGC 60.955 55.000 0.00 0.00 0.00 3.68
461 462 1.742761 ATGCGACAGTCTCCCATTTG 58.257 50.000 0.00 0.00 0.00 2.32
462 463 3.389329 AGATATGCGACAGTCTCCCATTT 59.611 43.478 0.00 0.00 0.00 2.32
463 464 2.968574 AGATATGCGACAGTCTCCCATT 59.031 45.455 0.00 0.00 0.00 3.16
464 465 2.560542 GAGATATGCGACAGTCTCCCAT 59.439 50.000 0.00 1.77 32.83 4.00
465 466 1.957177 GAGATATGCGACAGTCTCCCA 59.043 52.381 0.00 0.00 32.83 4.37
466 467 2.235016 AGAGATATGCGACAGTCTCCC 58.765 52.381 15.00 0.00 38.24 4.30
467 468 4.069304 AGTAGAGATATGCGACAGTCTCC 58.931 47.826 15.00 0.00 38.24 3.71
468 469 4.153475 GGAGTAGAGATATGCGACAGTCTC 59.847 50.000 0.00 12.67 37.86 3.36
469 470 4.069304 GGAGTAGAGATATGCGACAGTCT 58.931 47.826 0.00 0.00 0.00 3.24
470 471 4.069304 AGGAGTAGAGATATGCGACAGTC 58.931 47.826 0.00 0.00 0.00 3.51
471 472 4.093472 AGGAGTAGAGATATGCGACAGT 57.907 45.455 0.00 0.00 0.00 3.55
472 473 6.150307 ACATTAGGAGTAGAGATATGCGACAG 59.850 42.308 0.00 0.00 0.00 3.51
473 474 6.004574 ACATTAGGAGTAGAGATATGCGACA 58.995 40.000 0.00 0.00 0.00 4.35
474 475 6.373216 AGACATTAGGAGTAGAGATATGCGAC 59.627 42.308 0.00 0.00 0.00 5.19
475 476 6.477253 AGACATTAGGAGTAGAGATATGCGA 58.523 40.000 0.00 0.00 0.00 5.10
476 477 6.372937 TGAGACATTAGGAGTAGAGATATGCG 59.627 42.308 0.00 0.00 0.00 4.73
477 478 7.393234 ACTGAGACATTAGGAGTAGAGATATGC 59.607 40.741 0.00 0.00 0.00 3.14
478 479 8.862325 ACTGAGACATTAGGAGTAGAGATATG 57.138 38.462 0.00 0.00 0.00 1.78
479 480 9.295825 CAACTGAGACATTAGGAGTAGAGATAT 57.704 37.037 0.00 0.00 0.00 1.63
562 563 3.181437 GGTGGGAGGAAGTACCAAAGAAA 60.181 47.826 0.00 0.00 42.04 2.52
609 610 0.036306 ACTCGATTGCGGGGTTTTCT 59.964 50.000 0.00 0.00 43.99 2.52
734 737 2.281484 GCGGGAGTTTGGTCAGCA 60.281 61.111 0.00 0.00 0.00 4.41
795 799 1.587043 CGAACGAGGGCAGAGAGTCA 61.587 60.000 0.00 0.00 0.00 3.41
879 884 4.153330 GGAGGAGGTCGGGGGCTA 62.153 72.222 0.00 0.00 0.00 3.93
1320 1994 2.290514 CCCTGCAACTCATCCTCTTTGA 60.291 50.000 0.00 0.00 0.00 2.69
1441 2130 3.552384 TTGAGGTTCACCGCCGGT 61.552 61.111 1.02 1.02 42.08 5.28
1789 2482 3.749226 TGCAACACATGATTGGACACTA 58.251 40.909 0.00 0.00 0.00 2.74
2251 3907 1.002624 TTTGAGGTGGCACCGGATC 60.003 57.895 29.76 22.08 44.90 3.36
2284 3946 4.133796 GGCGTTCAATGCCCAGCC 62.134 66.667 9.81 0.00 44.49 4.85
3101 5139 5.122711 CCGTCCCATAATGTAAGACGTTTTT 59.877 40.000 9.63 0.00 46.62 1.94
3102 5140 4.632688 CCGTCCCATAATGTAAGACGTTTT 59.367 41.667 9.63 0.00 46.62 2.43
3103 5141 4.081531 TCCGTCCCATAATGTAAGACGTTT 60.082 41.667 9.63 0.00 46.62 3.60
3104 5142 3.448301 TCCGTCCCATAATGTAAGACGTT 59.552 43.478 9.63 0.00 46.62 3.99
3105 5143 3.025978 TCCGTCCCATAATGTAAGACGT 58.974 45.455 9.63 0.00 46.62 4.34
3107 5145 3.244112 CCCTCCGTCCCATAATGTAAGAC 60.244 52.174 0.00 0.00 0.00 3.01
3108 5146 2.969950 CCCTCCGTCCCATAATGTAAGA 59.030 50.000 0.00 0.00 0.00 2.10
3109 5147 2.969950 TCCCTCCGTCCCATAATGTAAG 59.030 50.000 0.00 0.00 0.00 2.34
3110 5148 2.969950 CTCCCTCCGTCCCATAATGTAA 59.030 50.000 0.00 0.00 0.00 2.41
3111 5149 2.090943 ACTCCCTCCGTCCCATAATGTA 60.091 50.000 0.00 0.00 0.00 2.29
3112 5150 1.344087 ACTCCCTCCGTCCCATAATGT 60.344 52.381 0.00 0.00 0.00 2.71
3113 5151 1.424638 ACTCCCTCCGTCCCATAATG 58.575 55.000 0.00 0.00 0.00 1.90
3114 5152 3.339713 TTACTCCCTCCGTCCCATAAT 57.660 47.619 0.00 0.00 0.00 1.28
3115 5153 2.852714 TTACTCCCTCCGTCCCATAA 57.147 50.000 0.00 0.00 0.00 1.90
3116 5154 3.771216 GTATTACTCCCTCCGTCCCATA 58.229 50.000 0.00 0.00 0.00 2.74
3117 5155 2.606378 GTATTACTCCCTCCGTCCCAT 58.394 52.381 0.00 0.00 0.00 4.00
3118 5156 1.751733 CGTATTACTCCCTCCGTCCCA 60.752 57.143 0.00 0.00 0.00 4.37
3119 5157 0.957362 CGTATTACTCCCTCCGTCCC 59.043 60.000 0.00 0.00 0.00 4.46
3120 5158 0.313357 GCGTATTACTCCCTCCGTCC 59.687 60.000 0.00 0.00 0.00 4.79
3121 5159 1.027357 TGCGTATTACTCCCTCCGTC 58.973 55.000 0.00 0.00 0.00 4.79
3122 5160 0.743097 GTGCGTATTACTCCCTCCGT 59.257 55.000 0.00 0.00 0.00 4.69
3123 5161 0.031721 GGTGCGTATTACTCCCTCCG 59.968 60.000 0.00 0.00 0.00 4.63
3124 5162 1.068741 CAGGTGCGTATTACTCCCTCC 59.931 57.143 0.00 0.00 0.00 4.30
3125 5163 1.068741 CCAGGTGCGTATTACTCCCTC 59.931 57.143 0.00 0.00 0.00 4.30
3126 5164 1.120530 CCAGGTGCGTATTACTCCCT 58.879 55.000 0.00 0.00 0.00 4.20
3127 5165 0.106149 CCCAGGTGCGTATTACTCCC 59.894 60.000 0.00 0.00 0.00 4.30
3128 5166 1.117150 TCCCAGGTGCGTATTACTCC 58.883 55.000 0.00 0.00 0.00 3.85
3129 5167 3.131396 CAATCCCAGGTGCGTATTACTC 58.869 50.000 0.00 0.00 0.00 2.59
3130 5168 2.158813 CCAATCCCAGGTGCGTATTACT 60.159 50.000 0.00 0.00 0.00 2.24
3131 5169 2.218603 CCAATCCCAGGTGCGTATTAC 58.781 52.381 0.00 0.00 0.00 1.89
3132 5170 1.841277 ACCAATCCCAGGTGCGTATTA 59.159 47.619 0.00 0.00 38.13 0.98
3133 5171 0.623723 ACCAATCCCAGGTGCGTATT 59.376 50.000 0.00 0.00 38.13 1.89
3134 5172 0.623723 AACCAATCCCAGGTGCGTAT 59.376 50.000 0.00 0.00 39.86 3.06
3135 5173 1.208535 CTAACCAATCCCAGGTGCGTA 59.791 52.381 0.00 0.00 39.86 4.42
3136 5174 0.035439 CTAACCAATCCCAGGTGCGT 60.035 55.000 0.00 0.00 39.86 5.24
3422 5492 7.400599 TTTCACTATGAACTACATACGGAGT 57.599 36.000 0.00 0.00 39.67 3.85
3515 5585 7.881142 TCGGTCATGTTCAATTAGTTTCATTT 58.119 30.769 0.00 0.00 0.00 2.32
3618 5688 4.545610 CTCCAAAAGCTAAATCGTGCAAA 58.454 39.130 0.00 0.00 0.00 3.68


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.