Multiple sequence alignment - TraesCS3B01G570400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G570400 chr3B 100.000 4929 0 0 1 4929 802319308 802314380 0.000000e+00 9103
1 TraesCS3B01G570400 chr3B 93.099 1536 80 5 2939 4451 801296851 801295319 0.000000e+00 2226
2 TraesCS3B01G570400 chr3B 90.295 1659 107 27 213 1842 801299736 801298103 0.000000e+00 2122
3 TraesCS3B01G570400 chr3B 93.762 1058 57 6 1886 2941 801298115 801297065 0.000000e+00 1580
4 TraesCS3B01G570400 chr3B 79.424 243 29 8 418 658 242889632 242889855 8.550000e-33 152
5 TraesCS3B01G570400 chr3D 92.534 1634 92 8 2939 4549 596692178 596693804 0.000000e+00 2314
6 TraesCS3B01G570400 chr3D 89.407 1652 118 25 213 1842 596689348 596690964 0.000000e+00 2028
7 TraesCS3B01G570400 chr3D 96.774 744 24 0 2198 2941 596691221 596691964 0.000000e+00 1242
8 TraesCS3B01G570400 chr3D 88.674 362 16 6 4583 4929 596694215 596694566 7.630000e-113 418
9 TraesCS3B01G570400 chr3D 85.461 282 26 8 1889 2168 596690956 596691224 3.760000e-71 279
10 TraesCS3B01G570400 chr5D 94.037 218 13 0 1 218 558781439 558781222 1.020000e-86 331
11 TraesCS3B01G570400 chr7B 93.427 213 14 0 1 213 534120793 534120581 2.860000e-82 316
12 TraesCS3B01G570400 chr5B 92.958 213 13 2 1 212 9984752 9984963 4.790000e-80 309
13 TraesCS3B01G570400 chr5B 78.151 357 52 20 408 757 283005990 283005653 2.330000e-48 204
14 TraesCS3B01G570400 chr2D 92.991 214 12 3 1 212 629917702 629917914 4.790000e-80 309
15 TraesCS3B01G570400 chr2B 92.056 214 16 1 1 213 236371208 236371421 2.880000e-77 300
16 TraesCS3B01G570400 chr2B 91.549 213 18 0 1 213 405575938 405575726 1.340000e-75 294
17 TraesCS3B01G570400 chr2B 91.204 216 18 1 1 215 331360864 331360649 4.830000e-75 292
18 TraesCS3B01G570400 chr2B 81.081 185 24 9 581 757 689770848 689771029 2.390000e-28 137
19 TraesCS3B01G570400 chr2B 88.889 81 8 1 2593 2672 13741570 13741490 1.130000e-16 99
20 TraesCS3B01G570400 chr6B 91.469 211 18 0 2 212 505298811 505299021 1.740000e-74 291
21 TraesCS3B01G570400 chr6B 91.121 214 17 2 1 213 150027909 150027697 6.240000e-74 289
22 TraesCS3B01G570400 chr6A 79.469 414 55 16 361 756 18078079 18078480 2.930000e-67 267
23 TraesCS3B01G570400 chr4D 77.804 419 63 17 358 757 49940147 49940554 1.070000e-56 231
24 TraesCS3B01G570400 chr4D 75.240 416 62 26 358 757 91072656 91072266 5.110000e-35 159
25 TraesCS3B01G570400 chr7A 77.228 404 68 13 359 757 19953260 19953644 1.070000e-51 215
26 TraesCS3B01G570400 chr1A 76.986 365 54 22 362 717 555536213 555535870 1.090000e-41 182
27 TraesCS3B01G570400 chr1A 76.902 368 53 23 362 717 555535716 555535369 3.920000e-41 180
28 TraesCS3B01G570400 chr3A 75.871 402 52 18 361 759 201474400 201474041 3.950000e-36 163
29 TraesCS3B01G570400 chr3A 87.736 106 9 4 416 520 442754340 442754442 2.410000e-23 121
30 TraesCS3B01G570400 chr7D 75.000 368 57 16 402 755 556545206 556545552 2.390000e-28 137


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G570400 chr3B 802314380 802319308 4928 True 9103.0 9103 100.000000 1 4929 1 chr3B.!!$R1 4928
1 TraesCS3B01G570400 chr3B 801295319 801299736 4417 True 1976.0 2226 92.385333 213 4451 3 chr3B.!!$R2 4238
2 TraesCS3B01G570400 chr3D 596689348 596694566 5218 False 1256.2 2314 90.570000 213 4929 5 chr3D.!!$F1 4716

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
40 41 0.030773 CACGCTCGATGGCTAGCTTA 59.969 55.0 15.72 4.59 36.56 3.09 F
73 74 0.034896 ACACACCAAAGCGGGACTAG 59.965 55.0 0.00 0.00 40.22 2.57 F
83 84 0.038801 GCGGGACTAGGGTATTACGC 60.039 60.0 2.80 2.80 38.94 4.42 F
143 144 0.103390 GGCTCTTAGACCCGCTCTTC 59.897 60.0 0.00 0.00 0.00 2.87 F
204 205 0.180406 ATGCCATAGGTGTCGTTCCC 59.820 55.0 0.00 0.00 0.00 3.97 F
1630 1659 0.180642 CATGCTCATCCTCAGCTGGT 59.819 55.0 15.13 0.00 37.79 4.00 F
2115 2147 0.245813 GTCCTCTTACACGTGACCCC 59.754 60.0 25.01 0.00 0.00 4.95 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1419 1448 0.389817 CGACCTTGGCGTTCATCTCA 60.390 55.000 0.00 0.00 0.00 3.27 R
1880 1911 1.003580 GGAATTGGACACTGGCAGAGA 59.996 52.381 23.66 0.00 0.00 3.10 R
1881 1912 1.004044 AGGAATTGGACACTGGCAGAG 59.996 52.381 23.66 16.77 0.00 3.35 R
1883 1914 1.004044 AGAGGAATTGGACACTGGCAG 59.996 52.381 14.16 14.16 0.00 4.85 R
1885 1916 1.457346 CAGAGGAATTGGACACTGGC 58.543 55.000 0.00 0.00 0.00 4.85 R
3496 3762 0.749818 TTGCAGCAACTGGACGGAAA 60.750 50.000 2.83 0.00 30.08 3.13 R
3944 4210 0.178970 ATGATGCTTGGCAGGGGATC 60.179 55.000 13.87 13.87 43.65 3.36 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 1.506493 CTCTTTGAGCAAGTCACGCT 58.494 50.000 0.00 0.00 44.10 5.07
30 31 4.485554 GAGCAAGTCACGCTCGAT 57.514 55.556 0.00 0.00 45.82 3.59
31 32 1.994467 GAGCAAGTCACGCTCGATG 59.006 57.895 0.00 0.00 45.82 3.84
32 33 1.416813 GAGCAAGTCACGCTCGATGG 61.417 60.000 0.00 0.00 45.82 3.51
33 34 3.084579 CAAGTCACGCTCGATGGC 58.915 61.111 0.00 0.00 0.00 4.40
34 35 1.446792 CAAGTCACGCTCGATGGCT 60.447 57.895 0.00 0.00 31.91 4.75
35 36 0.179137 CAAGTCACGCTCGATGGCTA 60.179 55.000 0.00 0.00 29.94 3.93
36 37 0.101399 AAGTCACGCTCGATGGCTAG 59.899 55.000 0.00 0.00 29.94 3.42
37 38 1.946650 GTCACGCTCGATGGCTAGC 60.947 63.158 6.04 6.04 35.33 3.42
38 39 2.121538 TCACGCTCGATGGCTAGCT 61.122 57.895 15.72 0.00 36.56 3.32
39 40 1.227089 CACGCTCGATGGCTAGCTT 60.227 57.895 15.72 2.16 36.56 3.74
40 41 0.030773 CACGCTCGATGGCTAGCTTA 59.969 55.000 15.72 4.59 36.56 3.09
41 42 0.744874 ACGCTCGATGGCTAGCTTAA 59.255 50.000 15.72 0.90 36.56 1.85
42 43 1.269309 ACGCTCGATGGCTAGCTTAAG 60.269 52.381 15.72 0.00 36.56 1.85
43 44 1.001268 CGCTCGATGGCTAGCTTAAGA 60.001 52.381 15.72 8.76 36.56 2.10
44 45 2.543861 CGCTCGATGGCTAGCTTAAGAA 60.544 50.000 15.72 0.00 36.56 2.52
45 46 2.797719 GCTCGATGGCTAGCTTAAGAAC 59.202 50.000 15.72 1.96 35.80 3.01
46 47 3.738281 GCTCGATGGCTAGCTTAAGAACA 60.738 47.826 15.72 2.05 35.80 3.18
47 48 4.626042 CTCGATGGCTAGCTTAAGAACAT 58.374 43.478 15.72 7.39 0.00 2.71
48 49 5.023533 TCGATGGCTAGCTTAAGAACATT 57.976 39.130 15.72 0.00 0.00 2.71
49 50 4.811024 TCGATGGCTAGCTTAAGAACATTG 59.189 41.667 15.72 11.10 0.00 2.82
50 51 4.811024 CGATGGCTAGCTTAAGAACATTGA 59.189 41.667 15.72 0.00 0.00 2.57
51 52 5.294306 CGATGGCTAGCTTAAGAACATTGAA 59.706 40.000 15.72 0.00 0.00 2.69
52 53 6.183360 CGATGGCTAGCTTAAGAACATTGAAA 60.183 38.462 15.72 0.00 0.00 2.69
53 54 7.467811 CGATGGCTAGCTTAAGAACATTGAAAT 60.468 37.037 15.72 0.00 0.00 2.17
54 55 8.752005 ATGGCTAGCTTAAGAACATTGAAATA 57.248 30.769 15.72 0.00 0.00 1.40
55 56 7.985476 TGGCTAGCTTAAGAACATTGAAATAC 58.015 34.615 15.72 0.00 0.00 1.89
56 57 7.609918 TGGCTAGCTTAAGAACATTGAAATACA 59.390 33.333 15.72 0.00 0.00 2.29
57 58 7.910683 GGCTAGCTTAAGAACATTGAAATACAC 59.089 37.037 15.72 0.00 0.00 2.90
58 59 8.450964 GCTAGCTTAAGAACATTGAAATACACA 58.549 33.333 7.70 0.00 0.00 3.72
59 60 9.760660 CTAGCTTAAGAACATTGAAATACACAC 57.239 33.333 6.67 0.00 0.00 3.82
60 61 7.593825 AGCTTAAGAACATTGAAATACACACC 58.406 34.615 6.67 0.00 0.00 4.16
61 62 7.230510 AGCTTAAGAACATTGAAATACACACCA 59.769 33.333 6.67 0.00 0.00 4.17
62 63 7.865385 GCTTAAGAACATTGAAATACACACCAA 59.135 33.333 6.67 0.00 0.00 3.67
63 64 9.743057 CTTAAGAACATTGAAATACACACCAAA 57.257 29.630 0.00 0.00 0.00 3.28
64 65 9.743057 TTAAGAACATTGAAATACACACCAAAG 57.257 29.630 0.00 0.00 0.00 2.77
65 66 6.215845 AGAACATTGAAATACACACCAAAGC 58.784 36.000 0.00 0.00 0.00 3.51
66 67 4.545610 ACATTGAAATACACACCAAAGCG 58.454 39.130 0.00 0.00 0.00 4.68
67 68 3.634568 TTGAAATACACACCAAAGCGG 57.365 42.857 0.00 0.00 42.50 5.52
68 69 1.883275 TGAAATACACACCAAAGCGGG 59.117 47.619 0.00 0.00 40.22 6.13
69 70 2.156098 GAAATACACACCAAAGCGGGA 58.844 47.619 0.00 0.00 40.22 5.14
70 71 1.530323 AATACACACCAAAGCGGGAC 58.470 50.000 0.00 0.00 40.22 4.46
71 72 0.690762 ATACACACCAAAGCGGGACT 59.309 50.000 0.00 0.00 40.22 3.85
72 73 1.340088 TACACACCAAAGCGGGACTA 58.660 50.000 0.00 0.00 40.22 2.59
73 74 0.034896 ACACACCAAAGCGGGACTAG 59.965 55.000 0.00 0.00 40.22 2.57
74 75 0.673644 CACACCAAAGCGGGACTAGG 60.674 60.000 0.00 0.00 40.22 3.02
75 76 1.078426 CACCAAAGCGGGACTAGGG 60.078 63.158 0.00 0.00 40.22 3.53
76 77 1.538135 ACCAAAGCGGGACTAGGGT 60.538 57.895 0.00 0.00 40.22 4.34
77 78 0.252375 ACCAAAGCGGGACTAGGGTA 60.252 55.000 0.00 0.00 40.22 3.69
78 79 1.129058 CCAAAGCGGGACTAGGGTAT 58.871 55.000 0.00 0.00 0.00 2.73
79 80 1.489230 CCAAAGCGGGACTAGGGTATT 59.511 52.381 0.00 0.00 0.00 1.89
80 81 2.701951 CCAAAGCGGGACTAGGGTATTA 59.298 50.000 0.00 0.00 0.00 0.98
81 82 3.493873 CCAAAGCGGGACTAGGGTATTAC 60.494 52.174 0.00 0.00 0.00 1.89
82 83 1.613836 AGCGGGACTAGGGTATTACG 58.386 55.000 0.00 0.00 0.00 3.18
83 84 0.038801 GCGGGACTAGGGTATTACGC 60.039 60.000 2.80 2.80 38.94 4.42
84 85 0.239347 CGGGACTAGGGTATTACGCG 59.761 60.000 3.53 3.53 36.04 6.01
85 86 1.609208 GGGACTAGGGTATTACGCGA 58.391 55.000 15.93 0.00 36.04 5.87
86 87 2.165998 GGGACTAGGGTATTACGCGAT 58.834 52.381 15.93 0.00 36.04 4.58
87 88 2.163211 GGGACTAGGGTATTACGCGATC 59.837 54.545 15.93 0.00 36.04 3.69
88 89 2.163211 GGACTAGGGTATTACGCGATCC 59.837 54.545 15.93 0.00 36.04 3.36
89 90 2.163211 GACTAGGGTATTACGCGATCCC 59.837 54.545 15.93 16.08 36.04 3.85
90 91 1.475682 CTAGGGTATTACGCGATCCCC 59.524 57.143 15.93 14.31 38.97 4.81
91 92 1.080298 GGGTATTACGCGATCCCCG 60.080 63.158 15.93 0.00 42.21 5.73
115 116 3.189618 CCCGAACCTGGGTAAACTATC 57.810 52.381 0.00 0.00 44.76 2.08
116 117 2.158856 CCCGAACCTGGGTAAACTATCC 60.159 54.545 0.00 0.00 44.76 2.59
117 118 2.770232 CCGAACCTGGGTAAACTATCCT 59.230 50.000 0.00 0.00 0.00 3.24
118 119 3.199289 CCGAACCTGGGTAAACTATCCTT 59.801 47.826 0.00 0.00 0.00 3.36
119 120 4.189231 CGAACCTGGGTAAACTATCCTTG 58.811 47.826 0.00 0.00 0.00 3.61
120 121 4.323257 CGAACCTGGGTAAACTATCCTTGT 60.323 45.833 0.00 0.00 0.00 3.16
121 122 4.569719 ACCTGGGTAAACTATCCTTGTG 57.430 45.455 0.00 0.00 0.00 3.33
122 123 3.279434 CCTGGGTAAACTATCCTTGTGC 58.721 50.000 0.00 0.00 0.00 4.57
123 124 3.054361 CCTGGGTAAACTATCCTTGTGCT 60.054 47.826 0.00 0.00 0.00 4.40
124 125 3.941483 CTGGGTAAACTATCCTTGTGCTG 59.059 47.826 0.00 0.00 0.00 4.41
125 126 3.279434 GGGTAAACTATCCTTGTGCTGG 58.721 50.000 0.00 0.00 0.00 4.85
126 127 2.683362 GGTAAACTATCCTTGTGCTGGC 59.317 50.000 0.00 0.00 0.00 4.85
127 128 2.887151 AAACTATCCTTGTGCTGGCT 57.113 45.000 0.00 0.00 0.00 4.75
128 129 2.409948 AACTATCCTTGTGCTGGCTC 57.590 50.000 0.00 0.00 0.00 4.70
129 130 1.577736 ACTATCCTTGTGCTGGCTCT 58.422 50.000 0.00 0.00 0.00 4.09
130 131 1.912043 ACTATCCTTGTGCTGGCTCTT 59.088 47.619 0.00 0.00 0.00 2.85
131 132 3.107601 ACTATCCTTGTGCTGGCTCTTA 58.892 45.455 0.00 0.00 0.00 2.10
132 133 2.706339 ATCCTTGTGCTGGCTCTTAG 57.294 50.000 0.00 0.00 0.00 2.18
133 134 1.644509 TCCTTGTGCTGGCTCTTAGA 58.355 50.000 0.00 0.00 0.00 2.10
134 135 1.276421 TCCTTGTGCTGGCTCTTAGAC 59.724 52.381 0.00 0.00 0.00 2.59
135 136 1.677217 CCTTGTGCTGGCTCTTAGACC 60.677 57.143 0.00 0.00 0.00 3.85
136 137 0.324943 TTGTGCTGGCTCTTAGACCC 59.675 55.000 0.00 0.00 0.00 4.46
137 138 1.153549 GTGCTGGCTCTTAGACCCG 60.154 63.158 0.00 0.00 0.00 5.28
138 139 2.202946 GCTGGCTCTTAGACCCGC 60.203 66.667 2.84 2.84 0.00 6.13
139 140 2.726351 GCTGGCTCTTAGACCCGCT 61.726 63.158 8.90 0.00 0.00 5.52
140 141 1.439644 CTGGCTCTTAGACCCGCTC 59.560 63.158 0.00 0.00 0.00 5.03
141 142 1.000486 TGGCTCTTAGACCCGCTCT 60.000 57.895 0.00 0.00 0.00 4.09
142 143 0.614979 TGGCTCTTAGACCCGCTCTT 60.615 55.000 0.00 0.00 0.00 2.85
143 144 0.103390 GGCTCTTAGACCCGCTCTTC 59.897 60.000 0.00 0.00 0.00 2.87
144 145 1.107945 GCTCTTAGACCCGCTCTTCT 58.892 55.000 0.00 0.00 0.00 2.85
145 146 1.066454 GCTCTTAGACCCGCTCTTCTC 59.934 57.143 0.00 0.00 0.00 2.87
146 147 2.370349 CTCTTAGACCCGCTCTTCTCA 58.630 52.381 0.00 0.00 0.00 3.27
147 148 2.093106 TCTTAGACCCGCTCTTCTCAC 58.907 52.381 0.00 0.00 0.00 3.51
148 149 1.819288 CTTAGACCCGCTCTTCTCACA 59.181 52.381 0.00 0.00 0.00 3.58
149 150 1.919240 TAGACCCGCTCTTCTCACAA 58.081 50.000 0.00 0.00 0.00 3.33
150 151 0.318762 AGACCCGCTCTTCTCACAAC 59.681 55.000 0.00 0.00 0.00 3.32
151 152 0.670854 GACCCGCTCTTCTCACAACC 60.671 60.000 0.00 0.00 0.00 3.77
152 153 1.376037 CCCGCTCTTCTCACAACCC 60.376 63.158 0.00 0.00 0.00 4.11
153 154 1.376037 CCGCTCTTCTCACAACCCC 60.376 63.158 0.00 0.00 0.00 4.95
154 155 1.738099 CGCTCTTCTCACAACCCCG 60.738 63.158 0.00 0.00 0.00 5.73
155 156 2.035442 GCTCTTCTCACAACCCCGC 61.035 63.158 0.00 0.00 0.00 6.13
156 157 1.738099 CTCTTCTCACAACCCCGCG 60.738 63.158 0.00 0.00 0.00 6.46
157 158 3.423154 CTTCTCACAACCCCGCGC 61.423 66.667 0.00 0.00 0.00 6.86
177 178 4.115199 GCCGGCCACAGAAGGGAT 62.115 66.667 18.11 0.00 0.00 3.85
178 179 2.677228 CCGGCCACAGAAGGGATT 59.323 61.111 2.24 0.00 0.00 3.01
179 180 1.452108 CCGGCCACAGAAGGGATTC 60.452 63.158 2.24 0.00 0.00 2.52
180 181 1.452108 CGGCCACAGAAGGGATTCC 60.452 63.158 2.24 0.00 0.00 3.01
181 182 1.452108 GGCCACAGAAGGGATTCCG 60.452 63.158 0.00 0.00 38.33 4.30
182 183 1.299976 GCCACAGAAGGGATTCCGT 59.700 57.895 0.00 0.00 38.33 4.69
183 184 0.322546 GCCACAGAAGGGATTCCGTT 60.323 55.000 10.33 10.33 38.33 4.44
184 185 1.453155 CCACAGAAGGGATTCCGTTG 58.547 55.000 15.08 5.56 38.33 4.10
185 186 1.003118 CCACAGAAGGGATTCCGTTGA 59.997 52.381 15.08 0.00 38.33 3.18
186 187 2.356125 CCACAGAAGGGATTCCGTTGAT 60.356 50.000 15.08 1.51 38.33 2.57
187 188 2.679837 CACAGAAGGGATTCCGTTGATG 59.320 50.000 15.08 14.51 38.33 3.07
188 189 1.672881 CAGAAGGGATTCCGTTGATGC 59.327 52.381 15.08 1.44 38.33 3.91
189 190 1.025041 GAAGGGATTCCGTTGATGCC 58.975 55.000 15.08 0.00 38.33 4.40
190 191 0.331278 AAGGGATTCCGTTGATGCCA 59.669 50.000 9.78 0.00 38.33 4.92
191 192 0.552848 AGGGATTCCGTTGATGCCAT 59.447 50.000 0.00 0.00 38.33 4.40
192 193 1.774254 AGGGATTCCGTTGATGCCATA 59.226 47.619 0.00 0.00 38.33 2.74
193 194 2.154462 GGGATTCCGTTGATGCCATAG 58.846 52.381 0.00 0.00 0.00 2.23
194 195 2.154462 GGATTCCGTTGATGCCATAGG 58.846 52.381 0.00 0.00 0.00 2.57
195 196 2.487265 GGATTCCGTTGATGCCATAGGT 60.487 50.000 0.00 0.00 0.00 3.08
196 197 2.036958 TTCCGTTGATGCCATAGGTG 57.963 50.000 0.00 0.00 0.00 4.00
197 198 0.908910 TCCGTTGATGCCATAGGTGT 59.091 50.000 0.00 0.00 0.00 4.16
198 199 1.134521 TCCGTTGATGCCATAGGTGTC 60.135 52.381 0.00 0.00 0.00 3.67
199 200 0.930310 CGTTGATGCCATAGGTGTCG 59.070 55.000 0.00 0.00 0.00 4.35
200 201 1.739035 CGTTGATGCCATAGGTGTCGT 60.739 52.381 0.00 0.00 0.00 4.34
201 202 2.356135 GTTGATGCCATAGGTGTCGTT 58.644 47.619 0.00 0.00 0.00 3.85
202 203 2.309528 TGATGCCATAGGTGTCGTTC 57.690 50.000 0.00 0.00 0.00 3.95
203 204 1.134521 TGATGCCATAGGTGTCGTTCC 60.135 52.381 0.00 0.00 0.00 3.62
204 205 0.180406 ATGCCATAGGTGTCGTTCCC 59.820 55.000 0.00 0.00 0.00 3.97
205 206 1.195442 TGCCATAGGTGTCGTTCCCA 61.195 55.000 0.00 0.00 0.00 4.37
206 207 0.743345 GCCATAGGTGTCGTTCCCAC 60.743 60.000 0.00 0.00 0.00 4.61
248 249 8.363390 CACATACTGTATTACCTCATCTCACAT 58.637 37.037 0.00 0.00 0.00 3.21
273 274 1.368579 GCAATGCCCAGTGTTGCTT 59.631 52.632 8.51 0.00 43.56 3.91
301 302 6.486253 TGAGCAACTTTGTAAGCTATGAAG 57.514 37.500 0.00 0.00 37.48 3.02
310 311 9.502091 ACTTTGTAAGCTATGAAGTTTGTATCA 57.498 29.630 0.00 0.00 0.00 2.15
351 353 5.921962 AAAAGTTCAATGAATAGCCCCTC 57.078 39.130 0.00 0.00 0.00 4.30
382 384 6.036191 GCGAAAGTATCCTTCTTTTTCTCGAT 59.964 38.462 0.00 0.00 35.62 3.59
411 413 6.803154 ATGCTCCTAAAGTGAACAGTAAAC 57.197 37.500 0.00 0.00 0.00 2.01
413 415 5.989777 TGCTCCTAAAGTGAACAGTAAACTC 59.010 40.000 0.00 0.00 0.00 3.01
414 416 5.118817 GCTCCTAAAGTGAACAGTAAACTCG 59.881 44.000 0.00 0.00 0.00 4.18
477 480 5.761234 AGAAATGTTTGAAGTGCATGCAAAT 59.239 32.000 24.58 14.50 34.47 2.32
487 490 6.428465 TGAAGTGCATGCAAATTTTTCATCAT 59.572 30.769 24.58 0.00 0.00 2.45
512 515 3.744238 TCACATTGAAGGAAGTCGTGA 57.256 42.857 0.00 0.00 0.00 4.35
513 516 4.066646 TCACATTGAAGGAAGTCGTGAA 57.933 40.909 0.00 0.00 0.00 3.18
542 545 1.191096 CGCACACACAAAAACAGAGC 58.809 50.000 0.00 0.00 0.00 4.09
544 547 2.731968 CGCACACACAAAAACAGAGCTT 60.732 45.455 0.00 0.00 0.00 3.74
574 577 4.762809 CGTTTGAGAGTAACACTTTCAGC 58.237 43.478 0.61 0.00 39.94 4.26
589 592 2.525750 TCAGCGCATCGATTTTGTTC 57.474 45.000 11.47 0.00 0.00 3.18
620 623 2.094390 CCCCTTGCACTGATGTGATTTG 60.094 50.000 0.00 0.00 46.55 2.32
621 624 2.821378 CCCTTGCACTGATGTGATTTGA 59.179 45.455 0.00 0.00 46.55 2.69
629 632 5.971792 GCACTGATGTGATTTGATGATGAAG 59.028 40.000 0.00 0.00 46.55 3.02
633 636 8.242053 ACTGATGTGATTTGATGATGAAGTTTC 58.758 33.333 0.00 0.00 0.00 2.78
637 640 5.284660 GTGATTTGATGATGAAGTTTCGCAC 59.715 40.000 0.00 0.00 0.00 5.34
664 667 8.673711 GCACTCCAAAAATTCCTTAAAGTTTTT 58.326 29.630 0.00 0.00 41.06 1.94
724 727 9.753674 TTTCTAATTTATTGTTCATCCAGGAGT 57.246 29.630 0.00 0.00 0.00 3.85
801 807 6.814954 AAGAGCTCCCTCATTTTCTGTATA 57.185 37.500 10.93 0.00 40.68 1.47
804 810 8.497910 AGAGCTCCCTCATTTTCTGTATAATA 57.502 34.615 10.93 0.00 40.68 0.98
807 813 8.884323 AGCTCCCTCATTTTCTGTATAATATGA 58.116 33.333 0.00 0.00 0.00 2.15
912 928 7.067496 TCTCCAACTCTAACATCAAAAGTCT 57.933 36.000 0.00 0.00 0.00 3.24
934 950 4.285863 TCCAAAATCAACCAAGTCAACCT 58.714 39.130 0.00 0.00 0.00 3.50
942 958 1.074951 CAAGTCAACCTCCACCCCC 59.925 63.158 0.00 0.00 0.00 5.40
943 959 1.072930 AAGTCAACCTCCACCCCCT 60.073 57.895 0.00 0.00 0.00 4.79
955 971 1.634222 ACCCCCTCCCCCTACCATA 60.634 63.158 0.00 0.00 0.00 2.74
996 1012 2.012673 GCATCATCGAGCAAGGAAAGT 58.987 47.619 0.00 0.00 0.00 2.66
1007 1024 3.054065 AGCAAGGAAAGTAAGATGGAGGG 60.054 47.826 0.00 0.00 0.00 4.30
1086 1103 1.211969 CACATGCAAGCAGCTGGAC 59.788 57.895 17.12 0.00 45.94 4.02
1156 1185 1.002366 CTGGAGAGGCAACGAAATCG 58.998 55.000 0.48 0.48 46.39 3.34
1192 1221 2.027377 ACCTGGATCTTGCAACTCAGAG 60.027 50.000 0.00 0.00 0.00 3.35
1200 1229 1.073897 GCAACTCAGAGGGTTGGCT 59.926 57.895 11.34 0.00 42.77 4.75
1384 1413 1.159713 TCCGATGGCGAATGATGCAC 61.160 55.000 0.00 0.00 40.82 4.57
1419 1448 2.301870 TGCCTTCGTACAGAACCAATCT 59.698 45.455 0.00 0.00 39.68 2.40
1438 1467 0.389817 TGAGATGAACGCCAAGGTCG 60.390 55.000 2.25 2.25 40.15 4.79
1518 1547 1.376609 ATGAAGTCCGCCGGCAATTC 61.377 55.000 28.98 22.22 0.00 2.17
1630 1659 0.180642 CATGCTCATCCTCAGCTGGT 59.819 55.000 15.13 0.00 37.79 4.00
1638 1667 1.434188 TCCTCAGCTGGTTCCTTTCA 58.566 50.000 15.13 0.00 0.00 2.69
1683 1712 1.266989 CTTCTGAAGGTTTTCGGCACC 59.733 52.381 9.57 0.00 39.17 5.01
1725 1754 4.221422 GGCGCCAGCTCCGACATA 62.221 66.667 24.80 0.00 44.37 2.29
1772 1801 2.887152 GCAAAGAAAGGTGTGTCTCCAT 59.113 45.455 0.00 0.00 0.00 3.41
1832 1863 5.063204 CAGTAACAATGTTCAGTTCAGGGA 58.937 41.667 0.22 0.00 0.00 4.20
1833 1864 5.180117 CAGTAACAATGTTCAGTTCAGGGAG 59.820 44.000 0.22 0.00 0.00 4.30
1834 1865 3.864789 ACAATGTTCAGTTCAGGGAGT 57.135 42.857 0.00 0.00 0.00 3.85
1835 1866 3.480470 ACAATGTTCAGTTCAGGGAGTG 58.520 45.455 0.00 0.00 0.00 3.51
1836 1867 3.117888 ACAATGTTCAGTTCAGGGAGTGT 60.118 43.478 0.00 0.00 0.00 3.55
1837 1868 4.102524 ACAATGTTCAGTTCAGGGAGTGTA 59.897 41.667 0.00 0.00 0.00 2.90
1838 1869 3.746045 TGTTCAGTTCAGGGAGTGTAC 57.254 47.619 0.00 0.00 0.00 2.90
1839 1870 2.367567 TGTTCAGTTCAGGGAGTGTACC 59.632 50.000 0.00 0.00 0.00 3.34
1840 1871 2.367567 GTTCAGTTCAGGGAGTGTACCA 59.632 50.000 0.00 0.00 0.00 3.25
1841 1872 2.902608 TCAGTTCAGGGAGTGTACCAT 58.097 47.619 0.00 0.00 0.00 3.55
1842 1873 4.055710 TCAGTTCAGGGAGTGTACCATA 57.944 45.455 0.00 0.00 0.00 2.74
1843 1874 4.422057 TCAGTTCAGGGAGTGTACCATAA 58.578 43.478 0.00 0.00 0.00 1.90
1844 1875 5.030147 TCAGTTCAGGGAGTGTACCATAAT 58.970 41.667 0.00 0.00 0.00 1.28
1845 1876 5.487488 TCAGTTCAGGGAGTGTACCATAATT 59.513 40.000 0.00 0.00 0.00 1.40
1846 1877 6.012858 TCAGTTCAGGGAGTGTACCATAATTT 60.013 38.462 0.00 0.00 0.00 1.82
1847 1878 6.316390 CAGTTCAGGGAGTGTACCATAATTTC 59.684 42.308 0.00 0.00 0.00 2.17
1848 1879 5.367945 TCAGGGAGTGTACCATAATTTCC 57.632 43.478 0.00 0.00 0.00 3.13
1849 1880 5.036916 TCAGGGAGTGTACCATAATTTCCT 58.963 41.667 0.00 0.00 0.00 3.36
1850 1881 5.130477 TCAGGGAGTGTACCATAATTTCCTC 59.870 44.000 0.00 0.00 0.00 3.71
1851 1882 4.412528 AGGGAGTGTACCATAATTTCCTCC 59.587 45.833 0.00 0.00 37.18 4.30
1852 1883 4.165372 GGGAGTGTACCATAATTTCCTCCA 59.835 45.833 0.00 0.00 39.17 3.86
1853 1884 5.339695 GGGAGTGTACCATAATTTCCTCCAA 60.340 44.000 0.00 0.00 39.17 3.53
1854 1885 6.365520 GGAGTGTACCATAATTTCCTCCAAT 58.634 40.000 0.00 0.00 37.71 3.16
1855 1886 7.420913 GGGAGTGTACCATAATTTCCTCCAATA 60.421 40.741 0.00 0.00 39.17 1.90
1856 1887 7.996644 GGAGTGTACCATAATTTCCTCCAATAA 59.003 37.037 0.00 0.00 37.71 1.40
1857 1888 9.403583 GAGTGTACCATAATTTCCTCCAATAAA 57.596 33.333 0.00 0.00 0.00 1.40
1858 1889 9.185680 AGTGTACCATAATTTCCTCCAATAAAC 57.814 33.333 0.00 0.00 0.00 2.01
1859 1890 9.185680 GTGTACCATAATTTCCTCCAATAAACT 57.814 33.333 0.00 0.00 0.00 2.66
1860 1891 9.403583 TGTACCATAATTTCCTCCAATAAACTC 57.596 33.333 0.00 0.00 0.00 3.01
1861 1892 9.628500 GTACCATAATTTCCTCCAATAAACTCT 57.372 33.333 0.00 0.00 0.00 3.24
1862 1893 8.753497 ACCATAATTTCCTCCAATAAACTCTC 57.247 34.615 0.00 0.00 0.00 3.20
1863 1894 7.780271 ACCATAATTTCCTCCAATAAACTCTCC 59.220 37.037 0.00 0.00 0.00 3.71
1864 1895 7.779798 CCATAATTTCCTCCAATAAACTCTCCA 59.220 37.037 0.00 0.00 0.00 3.86
1865 1896 9.359653 CATAATTTCCTCCAATAAACTCTCCAT 57.640 33.333 0.00 0.00 0.00 3.41
1866 1897 7.651027 AATTTCCTCCAATAAACTCTCCATG 57.349 36.000 0.00 0.00 0.00 3.66
1867 1898 6.387192 TTTCCTCCAATAAACTCTCCATGA 57.613 37.500 0.00 0.00 0.00 3.07
1868 1899 6.581388 TTCCTCCAATAAACTCTCCATGAT 57.419 37.500 0.00 0.00 0.00 2.45
1869 1900 6.581388 TCCTCCAATAAACTCTCCATGATT 57.419 37.500 0.00 0.00 0.00 2.57
1870 1901 7.690454 TCCTCCAATAAACTCTCCATGATTA 57.310 36.000 0.00 0.00 0.00 1.75
1871 1902 7.509546 TCCTCCAATAAACTCTCCATGATTAC 58.490 38.462 0.00 0.00 0.00 1.89
1872 1903 7.127186 TCCTCCAATAAACTCTCCATGATTACA 59.873 37.037 0.00 0.00 0.00 2.41
1873 1904 7.941238 CCTCCAATAAACTCTCCATGATTACAT 59.059 37.037 0.00 0.00 37.19 2.29
1874 1905 9.347240 CTCCAATAAACTCTCCATGATTACATT 57.653 33.333 0.00 0.00 34.15 2.71
1875 1906 9.699410 TCCAATAAACTCTCCATGATTACATTT 57.301 29.630 0.00 0.00 34.15 2.32
1876 1907 9.956720 CCAATAAACTCTCCATGATTACATTTC 57.043 33.333 0.00 0.00 34.15 2.17
1882 1913 9.471702 AACTCTCCATGATTACATTTCATTTCT 57.528 29.630 0.00 0.00 34.15 2.52
1883 1914 9.118300 ACTCTCCATGATTACATTTCATTTCTC 57.882 33.333 0.00 0.00 34.15 2.87
1884 1915 9.339850 CTCTCCATGATTACATTTCATTTCTCT 57.660 33.333 0.00 0.00 34.15 3.10
1885 1916 9.117183 TCTCCATGATTACATTTCATTTCTCTG 57.883 33.333 0.00 0.00 34.15 3.35
1886 1917 7.709947 TCCATGATTACATTTCATTTCTCTGC 58.290 34.615 0.00 0.00 34.15 4.26
1887 1918 6.921857 CCATGATTACATTTCATTTCTCTGCC 59.078 38.462 0.00 0.00 34.15 4.85
1896 1927 2.106338 TCATTTCTCTGCCAGTGTCCAA 59.894 45.455 0.00 0.00 0.00 3.53
1921 1952 3.072944 CTCTGCTTTTCCTCTGTTCCAG 58.927 50.000 0.00 0.00 0.00 3.86
1945 1976 5.133221 ACAGGGCATAATAGTGTCCATTTC 58.867 41.667 0.00 0.00 46.40 2.17
1976 2007 6.035975 GCTTTTAACAGAGTGTGCACATTTTT 59.964 34.615 24.69 14.92 0.00 1.94
2000 2031 5.710099 TGCTAACTGTTCTTATTGGGGAAAG 59.290 40.000 0.00 0.00 0.00 2.62
2002 2033 6.882678 GCTAACTGTTCTTATTGGGGAAAGTA 59.117 38.462 0.00 0.00 0.00 2.24
2004 2035 9.462606 CTAACTGTTCTTATTGGGGAAAGTAAT 57.537 33.333 0.00 0.00 0.00 1.89
2017 2048 7.555087 TGGGGAAAGTAATAATGAATGCAAAG 58.445 34.615 0.00 0.00 0.00 2.77
2039 2071 9.884465 CAAAGAACCACTAATTTCAGAACTAAG 57.116 33.333 0.00 0.00 0.00 2.18
2057 2089 8.216423 AGAACTAAGAAGCCATATTCATGTCAT 58.784 33.333 0.00 0.00 0.00 3.06
2064 2096 7.610692 AGAAGCCATATTCATGTCATTGATAGG 59.389 37.037 0.00 0.00 0.00 2.57
2077 2109 1.466856 TGATAGGCAGGCAAAGCAAG 58.533 50.000 0.00 0.00 0.00 4.01
2086 2118 4.248058 GCAGGCAAAGCAAGAAAACATAT 58.752 39.130 0.00 0.00 0.00 1.78
2093 2125 4.206477 AGCAAGAAAACATATTTGGGGC 57.794 40.909 0.00 0.00 0.00 5.80
2105 2137 2.579410 TTTGGGGCTTGTCCTCTTAC 57.421 50.000 0.00 0.00 35.85 2.34
2106 2138 1.440618 TTGGGGCTTGTCCTCTTACA 58.559 50.000 0.00 0.00 35.85 2.41
2114 2146 0.963962 TGTCCTCTTACACGTGACCC 59.036 55.000 25.01 1.45 0.00 4.46
2115 2147 0.245813 GTCCTCTTACACGTGACCCC 59.754 60.000 25.01 0.00 0.00 4.95
2171 2203 9.594478 GTTTATTTTTATTTCCGAACCATGGAT 57.406 29.630 21.47 6.44 34.91 3.41
2215 2247 8.679344 ACTTCATCCATTTTTAATAACCCCTT 57.321 30.769 0.00 0.00 0.00 3.95
2359 2391 0.474854 TCCCTTGGGCCAACAGAGTA 60.475 55.000 16.66 0.00 0.00 2.59
2392 2424 1.138883 CGTGACGACGGACATCCAT 59.861 57.895 0.00 0.00 42.18 3.41
2419 2451 1.451028 GAGACCCTGCATCTGTGGC 60.451 63.158 0.00 0.00 0.00 5.01
2594 2626 2.821969 AGGATTGTTGTTGAGGACATGC 59.178 45.455 0.00 0.00 38.26 4.06
2870 2902 2.028112 GCCAGGGCTGTGATCGATAATA 60.028 50.000 0.00 0.00 38.26 0.98
2927 2959 6.660521 TGAGACAATCCAAGAAGCATATGTTT 59.339 34.615 4.27 4.27 0.00 2.83
2975 3223 6.100668 AGCAGTATTAAAGAAGTTCCGAGTC 58.899 40.000 0.00 0.00 0.00 3.36
2991 3239 1.062525 GTCAAATAAGGCGGCTGCG 59.937 57.895 14.21 0.00 44.10 5.18
3005 3253 0.460987 GCTGCGGCAGTTAGAGACAT 60.461 55.000 28.88 0.00 38.54 3.06
3044 3292 0.526662 GGTAGTGACGGTGTCCTCAG 59.473 60.000 0.00 0.00 0.00 3.35
3113 3379 4.296690 GCTATCTGAAAATCCAAGCATGC 58.703 43.478 10.51 10.51 0.00 4.06
3121 3387 4.877378 AAATCCAAGCATGCTGAAGAAA 57.123 36.364 23.48 4.44 0.00 2.52
3418 3684 0.319900 TCTCTGTTGACTTCAGCGGC 60.320 55.000 0.00 0.00 34.06 6.53
3487 3753 2.427410 CTCAAACTGCGCGGCAAC 60.427 61.111 18.15 0.00 38.41 4.17
3837 4103 4.709886 TCTCAATGAAGTCGGACTCCATTA 59.290 41.667 20.14 4.84 0.00 1.90
3880 4146 0.394762 GTGGATGGGAAGATGCTGCA 60.395 55.000 4.13 4.13 0.00 4.41
3883 4149 1.307097 GATGGGAAGATGCTGCAGTC 58.693 55.000 16.64 5.85 0.00 3.51
3895 4161 2.511600 GCAGTCGGCCATAAGCGT 60.512 61.111 2.24 0.00 45.17 5.07
3916 4182 6.037423 CGTAAGCTCAGTATTTTGTCCATC 57.963 41.667 0.00 0.00 0.00 3.51
3921 4187 4.201822 GCTCAGTATTTTGTCCATCGGAAC 60.202 45.833 0.00 0.00 31.38 3.62
3925 4191 3.915437 ATTTTGTCCATCGGAACACAC 57.085 42.857 0.00 0.00 31.38 3.82
3932 4198 2.027653 TCCATCGGAACACACTAATGCA 60.028 45.455 0.00 0.00 0.00 3.96
3938 4204 3.308530 GGAACACACTAATGCAAGTTGC 58.691 45.455 21.17 21.17 45.29 4.17
3949 4215 1.648467 GCAAGTTGCGTCCAGATCCC 61.648 60.000 12.95 0.00 31.71 3.85
3954 4220 4.554036 GCGTCCAGATCCCCTGCC 62.554 72.222 0.00 0.00 41.57 4.85
3977 4243 2.432146 AGCATCATCATGTACGGTCAGT 59.568 45.455 0.00 0.00 31.86 3.41
3978 4244 3.118629 AGCATCATCATGTACGGTCAGTT 60.119 43.478 0.00 0.00 31.86 3.16
4014 4283 7.103641 GTCCATCGCCTCCTATTTATTATTCA 58.896 38.462 0.00 0.00 0.00 2.57
4033 4302 3.784178 TCATCTTCAGTCTTCTCCAGGT 58.216 45.455 0.00 0.00 0.00 4.00
4035 4304 4.020751 TCATCTTCAGTCTTCTCCAGGTTG 60.021 45.833 0.00 0.00 0.00 3.77
4049 4318 1.734117 GGTTGATTGTTGCTGCCGC 60.734 57.895 0.00 0.00 0.00 6.53
4051 4320 1.902918 TTGATTGTTGCTGCCGCCT 60.903 52.632 0.00 0.00 34.43 5.52
4053 4322 1.444895 GATTGTTGCTGCCGCCTTG 60.445 57.895 0.00 0.00 34.43 3.61
4071 4340 6.238621 CCGCCTTGCAATTAGATGTAATAACA 60.239 38.462 0.00 0.00 40.69 2.41
4078 4347 9.976255 TGCAATTAGATGTAATAACAACGTTAC 57.024 29.630 0.00 0.00 39.58 2.50
4080 4349 9.627657 CAATTAGATGTAATAACAACGTTACGG 57.372 33.333 10.20 0.00 39.58 4.02
4088 4357 6.457851 AATAACAACGTTACGGTCTTCTTC 57.542 37.500 10.20 0.00 0.00 2.87
4107 4380 4.398631 TTGCAGTGCAAAGCGTTG 57.601 50.000 27.79 8.11 45.96 4.10
4130 4403 4.125703 CAATGAGCCAATCACTAGAGGAC 58.874 47.826 0.00 0.00 41.91 3.85
4131 4404 3.107402 TGAGCCAATCACTAGAGGACT 57.893 47.619 0.00 0.00 31.12 3.85
4137 4410 4.679372 GCCAATCACTAGAGGACTCACTTC 60.679 50.000 0.00 0.00 0.00 3.01
4140 4413 2.104170 CACTAGAGGACTCACTTCCCC 58.896 57.143 0.00 0.00 36.12 4.81
4145 4418 1.552792 GAGGACTCACTTCCCCTTCTG 59.447 57.143 0.00 0.00 36.12 3.02
4150 4423 2.089980 CTCACTTCCCCTTCTGCAATG 58.910 52.381 0.00 0.00 0.00 2.82
4153 4426 1.089920 CTTCCCCTTCTGCAATGTCG 58.910 55.000 0.00 0.00 0.00 4.35
4155 4428 0.400213 TCCCCTTCTGCAATGTCGTT 59.600 50.000 0.00 0.00 0.00 3.85
4344 4618 0.698238 TCTTCATGGTTGGTCCCCAG 59.302 55.000 0.00 0.00 34.92 4.45
4351 4625 1.423794 GGTTGGTCCCCAGTTCAGGA 61.424 60.000 0.00 0.00 33.81 3.86
4453 4727 0.519961 AGCCAATCGCCGTTGTAAAC 59.480 50.000 0.00 0.00 37.82 2.01
4480 4754 3.490439 TGACCAATTCTCACAAGCAGA 57.510 42.857 0.00 0.00 0.00 4.26
4487 4761 5.702670 CCAATTCTCACAAGCAGAAGAGTTA 59.297 40.000 0.00 0.00 33.36 2.24
4511 4785 1.043022 AAGGTCAGCAAAAGCCCTTG 58.957 50.000 0.00 0.00 34.32 3.61
4512 4786 0.106015 AGGTCAGCAAAAGCCCTTGT 60.106 50.000 0.00 0.00 0.00 3.16
4513 4787 1.144913 AGGTCAGCAAAAGCCCTTGTA 59.855 47.619 0.00 0.00 0.00 2.41
4514 4788 1.541588 GGTCAGCAAAAGCCCTTGTAG 59.458 52.381 0.00 0.00 0.00 2.74
4529 4803 8.281212 AGCCCTTGTAGAAGTTAAATGTATTG 57.719 34.615 0.00 0.00 0.00 1.90
4533 4807 9.774742 CCTTGTAGAAGTTAAATGTATTGCTTC 57.225 33.333 0.00 0.00 34.33 3.86
4549 4823 1.009829 CTTCGCACTATGCTTGACCC 58.990 55.000 0.00 0.00 42.25 4.46
4570 4844 4.764491 CCCCCTCTATATTTCTACCACCT 58.236 47.826 0.00 0.00 0.00 4.00
4571 4845 4.532521 CCCCCTCTATATTTCTACCACCTG 59.467 50.000 0.00 0.00 0.00 4.00
4572 4846 4.020128 CCCCTCTATATTTCTACCACCTGC 60.020 50.000 0.00 0.00 0.00 4.85
4573 4847 4.841246 CCCTCTATATTTCTACCACCTGCT 59.159 45.833 0.00 0.00 0.00 4.24
4574 4848 6.017192 CCCTCTATATTTCTACCACCTGCTA 58.983 44.000 0.00 0.00 0.00 3.49
4575 4849 6.153680 CCCTCTATATTTCTACCACCTGCTAG 59.846 46.154 0.00 0.00 0.00 3.42
4576 4850 6.350612 CCTCTATATTTCTACCACCTGCTAGC 60.351 46.154 8.10 8.10 0.00 3.42
4577 4851 2.604046 ATTTCTACCACCTGCTAGCG 57.396 50.000 10.77 4.90 0.00 4.26
4578 4852 1.263356 TTTCTACCACCTGCTAGCGT 58.737 50.000 10.77 3.75 0.00 5.07
4579 4853 1.263356 TTCTACCACCTGCTAGCGTT 58.737 50.000 10.77 0.00 0.00 4.84
4580 4854 0.530744 TCTACCACCTGCTAGCGTTG 59.469 55.000 10.77 6.64 0.00 4.10
4581 4855 1.079405 TACCACCTGCTAGCGTTGC 60.079 57.895 10.77 0.00 0.00 4.17
4586 5237 1.328680 CACCTGCTAGCGTTGCTATTG 59.671 52.381 10.77 0.00 40.54 1.90
4596 5247 3.435671 AGCGTTGCTATTGTTGTACCTTC 59.564 43.478 0.00 0.00 36.99 3.46
4605 5256 7.230510 TGCTATTGTTGTACCTTCAGATTTTGT 59.769 33.333 0.00 0.00 0.00 2.83
4622 5273 7.643764 CAGATTTTGTTCTTCATTACGTGTTGT 59.356 33.333 0.00 0.00 0.00 3.32
4623 5274 7.643764 AGATTTTGTTCTTCATTACGTGTTGTG 59.356 33.333 0.00 0.00 0.00 3.33
4624 5275 5.804692 TTGTTCTTCATTACGTGTTGTGT 57.195 34.783 0.00 0.00 0.00 3.72
4625 5276 5.804692 TGTTCTTCATTACGTGTTGTGTT 57.195 34.783 0.00 0.00 0.00 3.32
4626 5277 5.564768 TGTTCTTCATTACGTGTTGTGTTG 58.435 37.500 0.00 0.00 0.00 3.33
4647 5298 5.244189 TGTTGTAAATAACCCTGCTACCA 57.756 39.130 0.00 0.00 0.00 3.25
4702 5368 6.524586 GCTTTAGATGATGTTCGTTTTGAAGG 59.475 38.462 0.00 0.00 37.23 3.46
4732 5398 4.756642 TCATACCTCTTGTTGAGCAACTTG 59.243 41.667 13.80 7.21 41.35 3.16
4733 5399 1.678101 ACCTCTTGTTGAGCAACTTGC 59.322 47.619 13.80 5.55 45.46 4.01
4754 5420 4.514066 TGCTTATAGCGTTCTATGACGAGA 59.486 41.667 1.15 0.00 46.26 4.04
4760 5426 3.440872 AGCGTTCTATGACGAGAAAGAGT 59.559 43.478 1.15 0.00 45.47 3.24
4771 5437 3.312697 ACGAGAAAGAGTTGGTTGCTTTC 59.687 43.478 0.00 0.00 44.75 2.62
4779 5445 9.181805 GAAAGAGTTGGTTGCTTTCTTTAATAC 57.818 33.333 0.00 0.00 42.45 1.89
4780 5446 8.465273 AAGAGTTGGTTGCTTTCTTTAATACT 57.535 30.769 0.00 0.00 0.00 2.12
4781 5447 7.875971 AGAGTTGGTTGCTTTCTTTAATACTG 58.124 34.615 0.00 0.00 0.00 2.74
4827 5493 2.028043 GCACAGGTTTGCACTGGC 59.972 61.111 7.62 4.65 42.49 4.85
4876 5542 1.620819 AGCTCCATAGGCCGTAATCTG 59.379 52.381 0.00 0.00 0.00 2.90
4877 5543 1.338200 GCTCCATAGGCCGTAATCTGG 60.338 57.143 0.00 0.00 0.00 3.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 1.506493 AGCGTGACTTGCTCAAAGAG 58.494 50.000 0.00 0.00 38.62 2.85
8 9 3.686622 AGCGTGACTTGCTCAAAGA 57.313 47.368 0.00 0.00 38.62 2.52
15 16 3.084579 CCATCGAGCGTGACTTGC 58.915 61.111 0.00 0.00 0.00 4.01
16 17 0.179137 TAGCCATCGAGCGTGACTTG 60.179 55.000 0.00 0.00 38.01 3.16
17 18 0.101399 CTAGCCATCGAGCGTGACTT 59.899 55.000 0.00 0.00 38.01 3.01
18 19 1.730487 CTAGCCATCGAGCGTGACT 59.270 57.895 0.00 0.00 38.01 3.41
19 20 1.946650 GCTAGCCATCGAGCGTGAC 60.947 63.158 2.29 0.00 38.01 3.67
20 21 1.667154 AAGCTAGCCATCGAGCGTGA 61.667 55.000 12.13 0.00 44.29 4.35
21 22 0.030773 TAAGCTAGCCATCGAGCGTG 59.969 55.000 12.13 0.00 44.29 5.34
22 23 0.744874 TTAAGCTAGCCATCGAGCGT 59.255 50.000 12.13 0.00 44.29 5.07
23 24 1.001268 TCTTAAGCTAGCCATCGAGCG 60.001 52.381 12.13 0.00 44.29 5.03
24 25 2.797719 GTTCTTAAGCTAGCCATCGAGC 59.202 50.000 12.13 2.06 40.64 5.03
25 26 4.046938 TGTTCTTAAGCTAGCCATCGAG 57.953 45.455 12.13 3.05 0.00 4.04
26 27 4.672587 ATGTTCTTAAGCTAGCCATCGA 57.327 40.909 12.13 0.36 0.00 3.59
27 28 4.811024 TCAATGTTCTTAAGCTAGCCATCG 59.189 41.667 12.13 0.00 0.00 3.84
28 29 6.683974 TTCAATGTTCTTAAGCTAGCCATC 57.316 37.500 12.13 0.00 0.00 3.51
29 30 7.651027 ATTTCAATGTTCTTAAGCTAGCCAT 57.349 32.000 12.13 3.15 0.00 4.40
30 31 7.609918 TGTATTTCAATGTTCTTAAGCTAGCCA 59.390 33.333 12.13 0.00 0.00 4.75
31 32 7.910683 GTGTATTTCAATGTTCTTAAGCTAGCC 59.089 37.037 12.13 0.00 0.00 3.93
32 33 8.450964 TGTGTATTTCAATGTTCTTAAGCTAGC 58.549 33.333 6.62 6.62 0.00 3.42
33 34 9.760660 GTGTGTATTTCAATGTTCTTAAGCTAG 57.239 33.333 0.00 0.00 0.00 3.42
34 35 8.726988 GGTGTGTATTTCAATGTTCTTAAGCTA 58.273 33.333 0.00 0.00 0.00 3.32
35 36 7.230510 TGGTGTGTATTTCAATGTTCTTAAGCT 59.769 33.333 0.00 0.00 0.00 3.74
36 37 7.367285 TGGTGTGTATTTCAATGTTCTTAAGC 58.633 34.615 0.00 0.00 0.00 3.09
37 38 9.743057 TTTGGTGTGTATTTCAATGTTCTTAAG 57.257 29.630 0.00 0.00 0.00 1.85
38 39 9.743057 CTTTGGTGTGTATTTCAATGTTCTTAA 57.257 29.630 0.00 0.00 0.00 1.85
39 40 7.865385 GCTTTGGTGTGTATTTCAATGTTCTTA 59.135 33.333 0.00 0.00 0.00 2.10
40 41 6.701400 GCTTTGGTGTGTATTTCAATGTTCTT 59.299 34.615 0.00 0.00 0.00 2.52
41 42 6.215845 GCTTTGGTGTGTATTTCAATGTTCT 58.784 36.000 0.00 0.00 0.00 3.01
42 43 5.116983 CGCTTTGGTGTGTATTTCAATGTTC 59.883 40.000 0.00 0.00 0.00 3.18
43 44 4.981674 CGCTTTGGTGTGTATTTCAATGTT 59.018 37.500 0.00 0.00 0.00 2.71
44 45 4.545610 CGCTTTGGTGTGTATTTCAATGT 58.454 39.130 0.00 0.00 0.00 2.71
45 46 3.919804 CCGCTTTGGTGTGTATTTCAATG 59.080 43.478 0.00 0.00 0.00 2.82
46 47 3.056891 CCCGCTTTGGTGTGTATTTCAAT 60.057 43.478 0.00 0.00 35.15 2.57
47 48 2.294791 CCCGCTTTGGTGTGTATTTCAA 59.705 45.455 0.00 0.00 35.15 2.69
48 49 1.883275 CCCGCTTTGGTGTGTATTTCA 59.117 47.619 0.00 0.00 35.15 2.69
49 50 2.095415 GTCCCGCTTTGGTGTGTATTTC 60.095 50.000 0.00 0.00 35.15 2.17
50 51 1.883926 GTCCCGCTTTGGTGTGTATTT 59.116 47.619 0.00 0.00 35.15 1.40
51 52 1.073284 AGTCCCGCTTTGGTGTGTATT 59.927 47.619 0.00 0.00 35.15 1.89
52 53 0.690762 AGTCCCGCTTTGGTGTGTAT 59.309 50.000 0.00 0.00 35.15 2.29
53 54 1.274167 CTAGTCCCGCTTTGGTGTGTA 59.726 52.381 0.00 0.00 35.15 2.90
54 55 0.034896 CTAGTCCCGCTTTGGTGTGT 59.965 55.000 0.00 0.00 35.15 3.72
55 56 0.673644 CCTAGTCCCGCTTTGGTGTG 60.674 60.000 0.00 0.00 35.15 3.82
56 57 1.677552 CCTAGTCCCGCTTTGGTGT 59.322 57.895 0.00 0.00 35.15 4.16
57 58 1.078426 CCCTAGTCCCGCTTTGGTG 60.078 63.158 0.00 0.00 35.15 4.17
58 59 0.252375 TACCCTAGTCCCGCTTTGGT 60.252 55.000 0.00 0.00 35.15 3.67
59 60 1.129058 ATACCCTAGTCCCGCTTTGG 58.871 55.000 0.00 0.00 37.55 3.28
60 61 3.725490 GTAATACCCTAGTCCCGCTTTG 58.275 50.000 0.00 0.00 0.00 2.77
61 62 2.363359 CGTAATACCCTAGTCCCGCTTT 59.637 50.000 0.00 0.00 0.00 3.51
62 63 1.959282 CGTAATACCCTAGTCCCGCTT 59.041 52.381 0.00 0.00 0.00 4.68
63 64 1.613836 CGTAATACCCTAGTCCCGCT 58.386 55.000 0.00 0.00 0.00 5.52
64 65 0.038801 GCGTAATACCCTAGTCCCGC 60.039 60.000 0.00 0.00 0.00 6.13
65 66 0.239347 CGCGTAATACCCTAGTCCCG 59.761 60.000 0.00 0.00 0.00 5.14
66 67 1.609208 TCGCGTAATACCCTAGTCCC 58.391 55.000 5.77 0.00 0.00 4.46
67 68 2.163211 GGATCGCGTAATACCCTAGTCC 59.837 54.545 5.77 0.00 0.00 3.85
68 69 2.163211 GGGATCGCGTAATACCCTAGTC 59.837 54.545 5.77 0.00 37.75 2.59
69 70 2.165998 GGGATCGCGTAATACCCTAGT 58.834 52.381 5.77 0.00 37.75 2.57
70 71 1.475682 GGGGATCGCGTAATACCCTAG 59.524 57.143 18.74 0.00 45.43 3.02
71 72 1.549203 GGGGATCGCGTAATACCCTA 58.451 55.000 18.74 0.00 45.43 3.53
72 73 1.530013 CGGGGATCGCGTAATACCCT 61.530 60.000 22.24 0.00 46.57 4.34
73 74 1.080298 CGGGGATCGCGTAATACCC 60.080 63.158 16.56 16.56 45.43 3.69
74 75 4.565531 CGGGGATCGCGTAATACC 57.434 61.111 5.77 2.63 35.14 2.73
96 97 2.770232 AGGATAGTTTACCCAGGTTCGG 59.230 50.000 0.00 0.00 0.00 4.30
97 98 4.189231 CAAGGATAGTTTACCCAGGTTCG 58.811 47.826 0.00 0.00 0.00 3.95
98 99 4.941873 CACAAGGATAGTTTACCCAGGTTC 59.058 45.833 0.00 0.00 0.00 3.62
99 100 4.809691 GCACAAGGATAGTTTACCCAGGTT 60.810 45.833 0.00 0.00 0.00 3.50
100 101 3.308188 GCACAAGGATAGTTTACCCAGGT 60.308 47.826 0.00 0.00 0.00 4.00
101 102 3.054361 AGCACAAGGATAGTTTACCCAGG 60.054 47.826 0.00 0.00 0.00 4.45
102 103 3.941483 CAGCACAAGGATAGTTTACCCAG 59.059 47.826 0.00 0.00 0.00 4.45
103 104 3.308117 CCAGCACAAGGATAGTTTACCCA 60.308 47.826 0.00 0.00 0.00 4.51
104 105 3.279434 CCAGCACAAGGATAGTTTACCC 58.721 50.000 0.00 0.00 0.00 3.69
105 106 2.683362 GCCAGCACAAGGATAGTTTACC 59.317 50.000 0.00 0.00 0.00 2.85
106 107 3.610911 AGCCAGCACAAGGATAGTTTAC 58.389 45.455 0.00 0.00 0.00 2.01
107 108 3.519510 AGAGCCAGCACAAGGATAGTTTA 59.480 43.478 0.00 0.00 0.00 2.01
108 109 2.307098 AGAGCCAGCACAAGGATAGTTT 59.693 45.455 0.00 0.00 0.00 2.66
109 110 1.912043 AGAGCCAGCACAAGGATAGTT 59.088 47.619 0.00 0.00 0.00 2.24
110 111 1.577736 AGAGCCAGCACAAGGATAGT 58.422 50.000 0.00 0.00 0.00 2.12
111 112 2.706339 AAGAGCCAGCACAAGGATAG 57.294 50.000 0.00 0.00 0.00 2.08
112 113 3.133003 GTCTAAGAGCCAGCACAAGGATA 59.867 47.826 0.00 0.00 0.00 2.59
113 114 2.093235 GTCTAAGAGCCAGCACAAGGAT 60.093 50.000 0.00 0.00 0.00 3.24
114 115 1.276421 GTCTAAGAGCCAGCACAAGGA 59.724 52.381 0.00 0.00 0.00 3.36
115 116 1.677217 GGTCTAAGAGCCAGCACAAGG 60.677 57.143 0.00 0.00 0.00 3.61
116 117 1.731720 GGTCTAAGAGCCAGCACAAG 58.268 55.000 0.00 0.00 0.00 3.16
117 118 3.935993 GGTCTAAGAGCCAGCACAA 57.064 52.632 0.00 0.00 0.00 3.33
124 125 0.103390 GAAGAGCGGGTCTAAGAGCC 59.897 60.000 10.52 0.00 45.64 4.70
125 126 1.066454 GAGAAGAGCGGGTCTAAGAGC 59.934 57.143 10.52 0.00 32.65 4.09
126 127 2.098443 GTGAGAAGAGCGGGTCTAAGAG 59.902 54.545 10.52 0.00 32.65 2.85
127 128 2.093106 GTGAGAAGAGCGGGTCTAAGA 58.907 52.381 10.52 0.00 32.65 2.10
128 129 1.819288 TGTGAGAAGAGCGGGTCTAAG 59.181 52.381 10.52 0.00 32.65 2.18
129 130 1.919240 TGTGAGAAGAGCGGGTCTAA 58.081 50.000 10.52 0.00 32.65 2.10
130 131 1.544691 GTTGTGAGAAGAGCGGGTCTA 59.455 52.381 10.52 0.00 32.65 2.59
131 132 0.318762 GTTGTGAGAAGAGCGGGTCT 59.681 55.000 3.41 3.41 36.94 3.85
132 133 0.670854 GGTTGTGAGAAGAGCGGGTC 60.671 60.000 0.00 0.00 0.00 4.46
133 134 1.371558 GGTTGTGAGAAGAGCGGGT 59.628 57.895 0.00 0.00 0.00 5.28
134 135 1.376037 GGGTTGTGAGAAGAGCGGG 60.376 63.158 0.00 0.00 0.00 6.13
135 136 1.376037 GGGGTTGTGAGAAGAGCGG 60.376 63.158 0.00 0.00 0.00 5.52
136 137 1.738099 CGGGGTTGTGAGAAGAGCG 60.738 63.158 0.00 0.00 0.00 5.03
137 138 2.035442 GCGGGGTTGTGAGAAGAGC 61.035 63.158 0.00 0.00 0.00 4.09
138 139 1.738099 CGCGGGGTTGTGAGAAGAG 60.738 63.158 0.00 0.00 0.00 2.85
139 140 2.342279 CGCGGGGTTGTGAGAAGA 59.658 61.111 0.00 0.00 0.00 2.87
140 141 3.423154 GCGCGGGGTTGTGAGAAG 61.423 66.667 8.83 0.00 0.00 2.85
160 161 3.645268 AATCCCTTCTGTGGCCGGC 62.645 63.158 21.18 21.18 0.00 6.13
161 162 1.452108 GAATCCCTTCTGTGGCCGG 60.452 63.158 0.00 0.00 0.00 6.13
162 163 1.452108 GGAATCCCTTCTGTGGCCG 60.452 63.158 0.00 0.00 0.00 6.13
163 164 1.452108 CGGAATCCCTTCTGTGGCC 60.452 63.158 0.00 0.00 33.74 5.36
164 165 1.299976 ACGGAATCCCTTCTGTGGC 59.700 57.895 0.00 0.00 46.83 5.01
168 169 1.672881 GCATCAACGGAATCCCTTCTG 59.327 52.381 0.00 0.00 42.50 3.02
169 170 1.408822 GGCATCAACGGAATCCCTTCT 60.409 52.381 0.00 0.00 0.00 2.85
170 171 1.025041 GGCATCAACGGAATCCCTTC 58.975 55.000 0.00 0.00 0.00 3.46
171 172 0.331278 TGGCATCAACGGAATCCCTT 59.669 50.000 0.00 0.00 0.00 3.95
172 173 0.552848 ATGGCATCAACGGAATCCCT 59.447 50.000 0.00 0.00 0.00 4.20
173 174 2.154462 CTATGGCATCAACGGAATCCC 58.846 52.381 1.65 0.00 0.00 3.85
174 175 2.154462 CCTATGGCATCAACGGAATCC 58.846 52.381 1.65 0.00 0.00 3.01
175 176 2.549754 CACCTATGGCATCAACGGAATC 59.450 50.000 1.65 0.00 0.00 2.52
176 177 2.092429 ACACCTATGGCATCAACGGAAT 60.092 45.455 1.65 0.00 0.00 3.01
177 178 1.280710 ACACCTATGGCATCAACGGAA 59.719 47.619 1.65 0.00 0.00 4.30
178 179 0.908910 ACACCTATGGCATCAACGGA 59.091 50.000 1.65 0.00 0.00 4.69
179 180 1.299541 GACACCTATGGCATCAACGG 58.700 55.000 1.65 3.32 32.03 4.44
180 181 0.930310 CGACACCTATGGCATCAACG 59.070 55.000 1.65 0.00 30.51 4.10
181 182 2.024176 ACGACACCTATGGCATCAAC 57.976 50.000 1.65 0.00 30.51 3.18
182 183 2.627945 GAACGACACCTATGGCATCAA 58.372 47.619 1.65 0.00 30.51 2.57
183 184 1.134521 GGAACGACACCTATGGCATCA 60.135 52.381 1.65 0.00 30.51 3.07
184 185 1.583054 GGAACGACACCTATGGCATC 58.417 55.000 1.65 0.00 30.51 3.91
185 186 0.180406 GGGAACGACACCTATGGCAT 59.820 55.000 4.88 4.88 30.51 4.40
186 187 1.195442 TGGGAACGACACCTATGGCA 61.195 55.000 0.00 0.00 30.51 4.92
187 188 0.743345 GTGGGAACGACACCTATGGC 60.743 60.000 0.00 0.00 32.80 4.40
188 189 3.453559 GTGGGAACGACACCTATGG 57.546 57.895 0.00 0.00 32.80 2.74
197 198 0.748450 GGATATGTCGGTGGGAACGA 59.252 55.000 0.00 0.00 38.13 3.85
198 199 0.249741 GGGATATGTCGGTGGGAACG 60.250 60.000 0.00 0.00 0.00 3.95
199 200 0.108019 GGGGATATGTCGGTGGGAAC 59.892 60.000 0.00 0.00 0.00 3.62
200 201 0.030501 AGGGGATATGTCGGTGGGAA 60.031 55.000 0.00 0.00 0.00 3.97
201 202 0.861854 TAGGGGATATGTCGGTGGGA 59.138 55.000 0.00 0.00 0.00 4.37
202 203 0.974383 GTAGGGGATATGTCGGTGGG 59.026 60.000 0.00 0.00 0.00 4.61
203 204 0.974383 GGTAGGGGATATGTCGGTGG 59.026 60.000 0.00 0.00 0.00 4.61
204 205 1.343465 GTGGTAGGGGATATGTCGGTG 59.657 57.143 0.00 0.00 0.00 4.94
205 206 1.062734 TGTGGTAGGGGATATGTCGGT 60.063 52.381 0.00 0.00 0.00 4.69
206 207 1.712056 TGTGGTAGGGGATATGTCGG 58.288 55.000 0.00 0.00 0.00 4.79
207 208 4.082190 CAGTATGTGGTAGGGGATATGTCG 60.082 50.000 0.00 0.00 0.00 4.35
208 209 5.407407 CAGTATGTGGTAGGGGATATGTC 57.593 47.826 0.00 0.00 0.00 3.06
329 331 4.711846 GGAGGGGCTATTCATTGAACTTTT 59.288 41.667 0.15 0.00 0.00 2.27
351 353 2.965462 GGATACTTTCGCGCCCGG 60.965 66.667 0.00 0.00 34.56 5.73
382 384 5.620206 TGTTCACTTTAGGAGCATTTGAGA 58.380 37.500 0.00 0.00 0.00 3.27
487 490 5.049474 CACGACTTCCTTCAATGTGATTTCA 60.049 40.000 0.00 0.00 0.00 2.69
521 524 2.176369 CTCTGTTTTTGTGTGTGCGTG 58.824 47.619 0.00 0.00 0.00 5.34
523 526 1.191096 GCTCTGTTTTTGTGTGTGCG 58.809 50.000 0.00 0.00 0.00 5.34
524 527 2.566952 AGCTCTGTTTTTGTGTGTGC 57.433 45.000 0.00 0.00 0.00 4.57
525 528 6.942886 TTTAAAGCTCTGTTTTTGTGTGTG 57.057 33.333 0.00 0.00 0.00 3.82
526 529 7.412891 GCATTTTAAAGCTCTGTTTTTGTGTGT 60.413 33.333 0.00 0.00 0.00 3.72
527 530 6.901357 GCATTTTAAAGCTCTGTTTTTGTGTG 59.099 34.615 0.00 0.00 0.00 3.82
542 545 7.855904 AGTGTTACTCTCAAACGCATTTTAAAG 59.144 33.333 2.78 0.00 39.30 1.85
544 547 7.254227 AGTGTTACTCTCAAACGCATTTTAA 57.746 32.000 2.78 0.00 39.30 1.52
574 577 7.375781 GTGATAAAAAGAACAAAATCGATGCG 58.624 34.615 0.00 0.00 0.00 4.73
589 592 3.826157 TCAGTGCAAGGGGTGATAAAAAG 59.174 43.478 0.00 0.00 0.00 2.27
620 623 1.128507 TGCGTGCGAAACTTCATCATC 59.871 47.619 0.00 0.00 0.00 2.92
621 624 1.135972 GTGCGTGCGAAACTTCATCAT 60.136 47.619 0.00 0.00 0.00 2.45
629 632 0.248296 TTTTGGAGTGCGTGCGAAAC 60.248 50.000 0.00 0.00 0.00 2.78
633 636 1.052287 GAATTTTTGGAGTGCGTGCG 58.948 50.000 0.00 0.00 0.00 5.34
637 640 5.528870 ACTTTAAGGAATTTTTGGAGTGCG 58.471 37.500 0.00 0.00 0.00 5.34
709 712 4.943705 GCTCAAATACTCCTGGATGAACAA 59.056 41.667 0.00 0.00 0.00 2.83
714 717 3.068732 TCGAGCTCAAATACTCCTGGATG 59.931 47.826 15.40 0.00 0.00 3.51
718 721 4.582701 ATCTCGAGCTCAAATACTCCTG 57.417 45.455 15.40 0.00 0.00 3.86
724 727 7.147897 TGGAGTTTCTAATCTCGAGCTCAAATA 60.148 37.037 15.40 0.00 0.00 1.40
801 807 8.070604 AGTCCCTATACTGCCTCATATCATATT 58.929 37.037 0.00 0.00 0.00 1.28
804 810 5.848004 AGTCCCTATACTGCCTCATATCAT 58.152 41.667 0.00 0.00 0.00 2.45
807 813 7.680310 ACATTTAGTCCCTATACTGCCTCATAT 59.320 37.037 0.00 0.00 0.00 1.78
811 817 5.810080 ACATTTAGTCCCTATACTGCCTC 57.190 43.478 0.00 0.00 0.00 4.70
812 818 7.347485 ACTTTACATTTAGTCCCTATACTGCCT 59.653 37.037 0.00 0.00 0.00 4.75
813 819 7.441458 CACTTTACATTTAGTCCCTATACTGCC 59.559 40.741 0.00 0.00 0.00 4.85
814 820 7.041984 GCACTTTACATTTAGTCCCTATACTGC 60.042 40.741 0.00 0.00 0.00 4.40
815 821 7.985184 TGCACTTTACATTTAGTCCCTATACTG 59.015 37.037 0.00 0.00 0.00 2.74
821 835 4.980573 TGTGCACTTTACATTTAGTCCCT 58.019 39.130 19.41 0.00 0.00 4.20
861 876 1.428912 AGGAGGAAGAAACATTGGGCA 59.571 47.619 0.00 0.00 0.00 5.36
862 877 2.095461 GAGGAGGAAGAAACATTGGGC 58.905 52.381 0.00 0.00 0.00 5.36
912 928 4.285863 AGGTTGACTTGGTTGATTTTGGA 58.714 39.130 0.00 0.00 0.00 3.53
934 950 3.702623 GTAGGGGGAGGGGGTGGA 61.703 72.222 0.00 0.00 0.00 4.02
942 958 0.767060 GGTGGGTATGGTAGGGGGAG 60.767 65.000 0.00 0.00 0.00 4.30
943 959 1.240337 AGGTGGGTATGGTAGGGGGA 61.240 60.000 0.00 0.00 0.00 4.81
955 971 2.305927 CAACACTCCAATCTAGGTGGGT 59.694 50.000 11.99 7.32 40.31 4.51
996 1012 2.705658 CACTATGGCACCCTCCATCTTA 59.294 50.000 0.00 0.00 43.00 2.10
1086 1103 5.124457 ACTTTGAATGAATCGAACATCAGGG 59.876 40.000 8.50 7.73 0.00 4.45
1156 1185 1.745489 AGGTTCTCCGCAAATCGCC 60.745 57.895 0.00 0.00 39.05 5.54
1200 1229 3.492137 CGATGCAGTCTTGGATCTCATGA 60.492 47.826 7.31 0.00 46.51 3.07
1384 1413 2.935201 CGAAGGCAAGAAGATCTTCCTG 59.065 50.000 28.01 25.95 40.33 3.86
1419 1448 0.389817 CGACCTTGGCGTTCATCTCA 60.390 55.000 0.00 0.00 0.00 3.27
1603 1632 3.285215 GATGAGCATGCCCAGCCG 61.285 66.667 15.66 0.00 0.00 5.52
1655 1684 4.550422 GAAAACCTTCAGAAGCAATCCAC 58.450 43.478 4.41 0.00 0.00 4.02
1656 1685 3.253188 CGAAAACCTTCAGAAGCAATCCA 59.747 43.478 4.41 0.00 0.00 3.41
1660 1689 1.336755 GCCGAAAACCTTCAGAAGCAA 59.663 47.619 4.41 0.00 0.00 3.91
1721 1750 5.776208 AGTGATCTGAGCTGATGATCTATGT 59.224 40.000 16.27 2.42 37.89 2.29
1725 1754 3.243941 GCAGTGATCTGAGCTGATGATCT 60.244 47.826 16.27 1.24 43.76 2.75
1803 1833 9.520204 CTGAACTGAACATTGTTACTGAAAATT 57.480 29.630 1.15 0.00 0.00 1.82
1835 1866 9.628500 AGAGTTTATTGGAGGAAATTATGGTAC 57.372 33.333 0.00 0.00 0.00 3.34
1836 1867 9.847224 GAGAGTTTATTGGAGGAAATTATGGTA 57.153 33.333 0.00 0.00 0.00 3.25
1837 1868 7.780271 GGAGAGTTTATTGGAGGAAATTATGGT 59.220 37.037 0.00 0.00 0.00 3.55
1838 1869 7.779798 TGGAGAGTTTATTGGAGGAAATTATGG 59.220 37.037 0.00 0.00 0.00 2.74
1839 1870 8.752005 TGGAGAGTTTATTGGAGGAAATTATG 57.248 34.615 0.00 0.00 0.00 1.90
1840 1871 9.359653 CATGGAGAGTTTATTGGAGGAAATTAT 57.640 33.333 0.00 0.00 0.00 1.28
1841 1872 8.556589 TCATGGAGAGTTTATTGGAGGAAATTA 58.443 33.333 0.00 0.00 0.00 1.40
1842 1873 7.413446 TCATGGAGAGTTTATTGGAGGAAATT 58.587 34.615 0.00 0.00 0.00 1.82
1843 1874 6.973642 TCATGGAGAGTTTATTGGAGGAAAT 58.026 36.000 0.00 0.00 0.00 2.17
1844 1875 6.387192 TCATGGAGAGTTTATTGGAGGAAA 57.613 37.500 0.00 0.00 0.00 3.13
1845 1876 6.581388 ATCATGGAGAGTTTATTGGAGGAA 57.419 37.500 0.00 0.00 0.00 3.36
1846 1877 6.581388 AATCATGGAGAGTTTATTGGAGGA 57.419 37.500 0.00 0.00 0.00 3.71
1847 1878 7.282585 TGTAATCATGGAGAGTTTATTGGAGG 58.717 38.462 0.00 0.00 0.00 4.30
1848 1879 8.915057 ATGTAATCATGGAGAGTTTATTGGAG 57.085 34.615 0.00 0.00 32.51 3.86
1849 1880 9.699410 AAATGTAATCATGGAGAGTTTATTGGA 57.301 29.630 0.00 0.00 34.19 3.53
1850 1881 9.956720 GAAATGTAATCATGGAGAGTTTATTGG 57.043 33.333 0.00 0.00 34.19 3.16
1856 1887 9.471702 AGAAATGAAATGTAATCATGGAGAGTT 57.528 29.630 0.00 0.00 37.58 3.01
1857 1888 9.118300 GAGAAATGAAATGTAATCATGGAGAGT 57.882 33.333 0.00 0.00 37.58 3.24
1858 1889 9.339850 AGAGAAATGAAATGTAATCATGGAGAG 57.660 33.333 0.00 0.00 37.58 3.20
1859 1890 9.117183 CAGAGAAATGAAATGTAATCATGGAGA 57.883 33.333 0.00 0.00 37.58 3.71
1860 1891 7.861372 GCAGAGAAATGAAATGTAATCATGGAG 59.139 37.037 0.00 0.00 37.58 3.86
1861 1892 7.201848 GGCAGAGAAATGAAATGTAATCATGGA 60.202 37.037 0.00 0.00 37.58 3.41
1862 1893 6.921857 GGCAGAGAAATGAAATGTAATCATGG 59.078 38.462 0.00 0.00 37.58 3.66
1863 1894 7.485810 TGGCAGAGAAATGAAATGTAATCATG 58.514 34.615 0.00 0.00 37.58 3.07
1864 1895 7.341256 ACTGGCAGAGAAATGAAATGTAATCAT 59.659 33.333 23.66 0.00 39.15 2.45
1865 1896 6.660521 ACTGGCAGAGAAATGAAATGTAATCA 59.339 34.615 23.66 0.00 0.00 2.57
1866 1897 6.971184 CACTGGCAGAGAAATGAAATGTAATC 59.029 38.462 23.66 0.00 0.00 1.75
1867 1898 6.435277 ACACTGGCAGAGAAATGAAATGTAAT 59.565 34.615 23.66 0.00 0.00 1.89
1868 1899 5.769662 ACACTGGCAGAGAAATGAAATGTAA 59.230 36.000 23.66 0.00 0.00 2.41
1869 1900 5.316167 ACACTGGCAGAGAAATGAAATGTA 58.684 37.500 23.66 0.00 0.00 2.29
1870 1901 4.147321 ACACTGGCAGAGAAATGAAATGT 58.853 39.130 23.66 7.89 0.00 2.71
1871 1902 4.380233 GGACACTGGCAGAGAAATGAAATG 60.380 45.833 23.66 7.20 0.00 2.32
1872 1903 3.760684 GGACACTGGCAGAGAAATGAAAT 59.239 43.478 23.66 0.00 0.00 2.17
1873 1904 3.149196 GGACACTGGCAGAGAAATGAAA 58.851 45.455 23.66 0.00 0.00 2.69
1874 1905 2.106338 TGGACACTGGCAGAGAAATGAA 59.894 45.455 23.66 0.00 0.00 2.57
1875 1906 1.699083 TGGACACTGGCAGAGAAATGA 59.301 47.619 23.66 0.00 0.00 2.57
1876 1907 2.189594 TGGACACTGGCAGAGAAATG 57.810 50.000 23.66 11.12 0.00 2.32
1877 1908 2.957402 TTGGACACTGGCAGAGAAAT 57.043 45.000 23.66 0.00 0.00 2.17
1878 1909 2.957402 ATTGGACACTGGCAGAGAAA 57.043 45.000 23.66 11.14 0.00 2.52
1879 1910 2.553028 GGAATTGGACACTGGCAGAGAA 60.553 50.000 23.66 4.17 0.00 2.87
1880 1911 1.003580 GGAATTGGACACTGGCAGAGA 59.996 52.381 23.66 0.00 0.00 3.10
1881 1912 1.004044 AGGAATTGGACACTGGCAGAG 59.996 52.381 23.66 16.77 0.00 3.35
1882 1913 1.003580 GAGGAATTGGACACTGGCAGA 59.996 52.381 23.66 0.00 0.00 4.26
1883 1914 1.004044 AGAGGAATTGGACACTGGCAG 59.996 52.381 14.16 14.16 0.00 4.85
1884 1915 1.067295 AGAGGAATTGGACACTGGCA 58.933 50.000 0.00 0.00 0.00 4.92
1885 1916 1.457346 CAGAGGAATTGGACACTGGC 58.543 55.000 0.00 0.00 0.00 4.85
1886 1917 1.004044 AGCAGAGGAATTGGACACTGG 59.996 52.381 0.00 0.00 0.00 4.00
1887 1918 2.486472 AGCAGAGGAATTGGACACTG 57.514 50.000 0.00 0.00 0.00 3.66
1896 1927 4.331108 GAACAGAGGAAAAGCAGAGGAAT 58.669 43.478 0.00 0.00 0.00 3.01
1921 1952 3.838244 TGGACACTATTATGCCCTGTC 57.162 47.619 0.00 0.00 0.00 3.51
1929 1960 4.447762 GCAGGGGGAAATGGACACTATTAT 60.448 45.833 0.00 0.00 0.00 1.28
1945 1976 2.162681 CACTCTGTTAAAAGCAGGGGG 58.837 52.381 0.00 0.00 38.69 5.40
1976 2007 4.919774 TCCCCAATAAGAACAGTTAGCA 57.080 40.909 0.00 0.00 0.00 3.49
2004 2035 9.638239 GAAATTAGTGGTTCTTTGCATTCATTA 57.362 29.630 0.00 0.00 0.00 1.90
2017 2048 8.231161 GCTTCTTAGTTCTGAAATTAGTGGTTC 58.769 37.037 0.00 0.00 0.00 3.62
2039 2071 7.627939 GCCTATCAATGACATGAATATGGCTTC 60.628 40.741 0.00 0.00 43.12 3.86
2057 2089 1.820519 CTTGCTTTGCCTGCCTATCAA 59.179 47.619 0.00 0.00 0.00 2.57
2064 2096 1.938625 TGTTTTCTTGCTTTGCCTGC 58.061 45.000 0.00 0.00 0.00 4.85
2077 2109 4.222810 AGGACAAGCCCCAAATATGTTTTC 59.777 41.667 0.00 0.00 37.37 2.29
2086 2118 1.777878 TGTAAGAGGACAAGCCCCAAA 59.222 47.619 0.00 0.00 37.37 3.28
2093 2125 2.609737 GGGTCACGTGTAAGAGGACAAG 60.610 54.545 16.51 0.00 35.27 3.16
2144 2176 8.585881 TCCATGGTTCGGAAATAAAAATAAACA 58.414 29.630 12.58 0.00 0.00 2.83
2145 2177 8.989653 TCCATGGTTCGGAAATAAAAATAAAC 57.010 30.769 12.58 0.00 0.00 2.01
2171 2203 7.252612 TGAAGTTGATACAATACCAGGAGAA 57.747 36.000 0.00 0.00 0.00 2.87
2205 2237 1.077005 TCTGCAGCCAAAGGGGTTATT 59.923 47.619 9.47 0.00 44.14 1.40
2215 2247 0.107993 CGATTCTCCTCTGCAGCCAA 60.108 55.000 9.47 0.00 0.00 4.52
2359 2391 1.522355 CACGATGATTCTGCCGCCT 60.522 57.895 0.00 0.00 0.00 5.52
2419 2451 0.518636 CAAGCAGTGGTGGATCGTTG 59.481 55.000 0.00 0.00 0.00 4.10
2789 2821 1.335872 CGTCACCTTTCCATTGTTGCC 60.336 52.381 0.00 0.00 0.00 4.52
2848 2880 1.048160 TATCGATCACAGCCCTGGCA 61.048 55.000 11.38 0.00 44.88 4.92
2908 2940 4.440525 CGGCAAACATATGCTTCTTGGATT 60.441 41.667 1.58 0.00 45.68 3.01
2927 2959 1.302511 GGCTCAGAGAAAACCGGCA 60.303 57.895 0.00 0.00 0.00 5.69
2975 3223 2.408835 CCGCAGCCGCCTTATTTG 59.591 61.111 0.00 0.00 33.11 2.32
2991 3239 5.773575 TCATATCGAATGTCTCTAACTGCC 58.226 41.667 0.00 0.00 0.00 4.85
3005 3253 3.129813 ACCGCACTTGTACTCATATCGAA 59.870 43.478 0.00 0.00 0.00 3.71
3044 3292 5.048083 TCAATTTGGGCAACTTGAGTACATC 60.048 40.000 0.00 0.00 35.81 3.06
3113 3379 2.351157 CCTTCTTTGCGCCTTTCTTCAG 60.351 50.000 4.18 0.00 0.00 3.02
3121 3387 2.561478 TCTTTACCTTCTTTGCGCCT 57.439 45.000 4.18 0.00 0.00 5.52
3358 3624 1.745087 GTACGGATTCGGTGACTGGTA 59.255 52.381 0.00 0.00 41.39 3.25
3418 3684 3.988976 TCCAGGAAGGATTGTGAAGAG 57.011 47.619 0.00 0.00 43.07 2.85
3496 3762 0.749818 TTGCAGCAACTGGACGGAAA 60.750 50.000 2.83 0.00 30.08 3.13
3739 4005 3.315191 GCAAGTGGAGTGAAACAAGCTTA 59.685 43.478 0.00 0.00 41.43 3.09
3837 4103 3.401033 TGATGTCACCGTCAACTTGAT 57.599 42.857 0.00 0.00 33.67 2.57
3880 4146 0.529992 GCTTACGCTTATGGCCGACT 60.530 55.000 0.00 0.00 37.74 4.18
3883 4149 4.438346 AGCTTACGCTTATGGCCG 57.562 55.556 0.00 0.00 46.47 6.13
3895 4161 5.105106 TCCGATGGACAAAATACTGAGCTTA 60.105 40.000 0.00 0.00 0.00 3.09
3908 4174 3.755112 TTAGTGTGTTCCGATGGACAA 57.245 42.857 0.00 0.00 0.00 3.18
3916 4182 3.554524 CAACTTGCATTAGTGTGTTCCG 58.445 45.455 0.00 0.00 0.00 4.30
3921 4187 2.574322 GACGCAACTTGCATTAGTGTG 58.426 47.619 14.10 0.00 45.36 3.82
3925 4191 2.076100 TCTGGACGCAACTTGCATTAG 58.924 47.619 14.10 6.33 45.36 1.73
3932 4198 1.201429 AGGGGATCTGGACGCAACTT 61.201 55.000 0.00 0.00 0.00 2.66
3938 4204 2.599645 CTTGGCAGGGGATCTGGACG 62.600 65.000 0.00 0.00 43.54 4.79
3944 4210 0.178970 ATGATGCTTGGCAGGGGATC 60.179 55.000 13.87 13.87 43.65 3.36
3949 4215 1.399714 ACATGATGATGCTTGGCAGG 58.600 50.000 0.00 0.00 43.65 4.85
3954 4220 3.197265 TGACCGTACATGATGATGCTTG 58.803 45.455 0.00 0.00 32.14 4.01
3987 4253 1.507140 AAATAGGAGGCGATGGACCA 58.493 50.000 0.00 0.00 0.00 4.02
4014 4283 4.163427 TCAACCTGGAGAAGACTGAAGAT 58.837 43.478 0.00 0.00 0.00 2.40
4049 4318 8.181573 ACGTTGTTATTACATCTAATTGCAAGG 58.818 33.333 4.94 0.00 33.44 3.61
4053 4322 9.139726 CGTAACGTTGTTATTACATCTAATTGC 57.860 33.333 11.99 0.00 33.44 3.56
4071 4340 3.185797 GCAATGAAGAAGACCGTAACGTT 59.814 43.478 5.88 5.88 0.00 3.99
4078 4347 1.135859 GCACTGCAATGAAGAAGACCG 60.136 52.381 0.00 0.00 0.00 4.79
4080 4349 3.631145 TTGCACTGCAATGAAGAAGAC 57.369 42.857 12.59 0.00 43.99 3.01
4104 4377 3.691118 TCTAGTGATTGGCTCATTGCAAC 59.309 43.478 0.00 0.00 45.15 4.17
4107 4380 2.877168 CCTCTAGTGATTGGCTCATTGC 59.123 50.000 0.00 0.00 35.97 3.56
4109 4382 4.036518 AGTCCTCTAGTGATTGGCTCATT 58.963 43.478 0.00 0.00 35.97 2.57
4111 4384 3.027412 GAGTCCTCTAGTGATTGGCTCA 58.973 50.000 0.00 0.00 0.00 4.26
4130 4403 2.089980 CATTGCAGAAGGGGAAGTGAG 58.910 52.381 0.00 0.00 0.00 3.51
4131 4404 1.425066 ACATTGCAGAAGGGGAAGTGA 59.575 47.619 0.00 0.00 0.00 3.41
4137 4410 0.523072 CAACGACATTGCAGAAGGGG 59.477 55.000 0.00 0.00 0.00 4.79
4150 4423 7.193595 AGGCAAAATATTAATACTGCAACGAC 58.806 34.615 19.73 8.53 0.00 4.34
4153 4426 7.716612 AGGAGGCAAAATATTAATACTGCAAC 58.283 34.615 19.73 14.57 0.00 4.17
4155 4428 7.014230 GGAAGGAGGCAAAATATTAATACTGCA 59.986 37.037 19.73 0.00 0.00 4.41
4158 4431 9.082313 CATGGAAGGAGGCAAAATATTAATACT 57.918 33.333 0.00 0.00 0.00 2.12
4160 4433 7.508636 TGCATGGAAGGAGGCAAAATATTAATA 59.491 33.333 0.00 0.00 32.54 0.98
4165 4438 3.645434 TGCATGGAAGGAGGCAAAATAT 58.355 40.909 0.00 0.00 32.54 1.28
4344 4618 6.434340 ACCAGTAATTTCCATCTTTCCTGAAC 59.566 38.462 0.00 0.00 0.00 3.18
4351 4625 5.402630 ACCCAACCAGTAATTTCCATCTTT 58.597 37.500 0.00 0.00 0.00 2.52
4453 4727 6.258287 TGCTTGTGAGAATTGGTCAAAATTTG 59.742 34.615 0.00 0.00 29.89 2.32
4480 4754 5.401531 TTGCTGACCTTATCGTAACTCTT 57.598 39.130 0.00 0.00 0.00 2.85
4487 4761 2.084546 GGCTTTTGCTGACCTTATCGT 58.915 47.619 0.00 0.00 46.54 3.73
4549 4823 4.020128 GCAGGTGGTAGAAATATAGAGGGG 60.020 50.000 0.00 0.00 0.00 4.79
4552 4826 6.623986 CGCTAGCAGGTGGTAGAAATATAGAG 60.624 46.154 16.45 0.00 46.05 2.43
4553 4827 5.183331 CGCTAGCAGGTGGTAGAAATATAGA 59.817 44.000 16.45 0.00 46.05 1.98
4554 4828 5.047943 ACGCTAGCAGGTGGTAGAAATATAG 60.048 44.000 16.45 0.00 46.05 1.31
4555 4829 4.831155 ACGCTAGCAGGTGGTAGAAATATA 59.169 41.667 16.45 0.00 46.05 0.86
4556 4830 3.641906 ACGCTAGCAGGTGGTAGAAATAT 59.358 43.478 16.45 0.00 46.05 1.28
4557 4831 3.028850 ACGCTAGCAGGTGGTAGAAATA 58.971 45.455 16.45 0.00 46.05 1.40
4558 4832 1.831736 ACGCTAGCAGGTGGTAGAAAT 59.168 47.619 16.45 1.90 46.05 2.17
4559 4833 1.263356 ACGCTAGCAGGTGGTAGAAA 58.737 50.000 16.45 0.00 46.05 2.52
4560 4834 1.067142 CAACGCTAGCAGGTGGTAGAA 60.067 52.381 16.45 0.00 46.05 2.10
4561 4835 0.530744 CAACGCTAGCAGGTGGTAGA 59.469 55.000 16.45 0.00 46.05 2.59
4562 4836 1.084370 GCAACGCTAGCAGGTGGTAG 61.084 60.000 20.77 11.14 45.95 3.18
4563 4837 1.079405 GCAACGCTAGCAGGTGGTA 60.079 57.895 20.77 0.00 0.00 3.25
4564 4838 1.541310 TAGCAACGCTAGCAGGTGGT 61.541 55.000 24.76 24.76 40.44 4.16
4565 4839 0.179073 ATAGCAACGCTAGCAGGTGG 60.179 55.000 20.77 9.18 44.66 4.61
4566 4840 1.328680 CAATAGCAACGCTAGCAGGTG 59.671 52.381 16.45 16.71 44.66 4.00
4567 4841 1.066143 ACAATAGCAACGCTAGCAGGT 60.066 47.619 16.45 11.72 44.66 4.00
4568 4842 1.656652 ACAATAGCAACGCTAGCAGG 58.343 50.000 16.45 4.15 44.66 4.85
4569 4843 2.416547 ACAACAATAGCAACGCTAGCAG 59.583 45.455 16.45 10.16 44.66 4.24
4570 4844 2.422597 ACAACAATAGCAACGCTAGCA 58.577 42.857 16.45 0.00 44.66 3.49
4571 4845 3.242316 GGTACAACAATAGCAACGCTAGC 60.242 47.826 4.06 4.06 44.66 3.42
4572 4846 4.181578 AGGTACAACAATAGCAACGCTAG 58.818 43.478 1.79 0.00 44.66 3.42
4573 4847 4.196626 AGGTACAACAATAGCAACGCTA 57.803 40.909 0.00 0.00 45.55 4.26
4574 4848 3.053831 AGGTACAACAATAGCAACGCT 57.946 42.857 0.00 0.00 43.41 5.07
4575 4849 3.187637 TGAAGGTACAACAATAGCAACGC 59.812 43.478 0.00 0.00 0.00 4.84
4576 4850 4.688879 TCTGAAGGTACAACAATAGCAACG 59.311 41.667 0.00 0.00 0.00 4.10
4577 4851 6.743575 ATCTGAAGGTACAACAATAGCAAC 57.256 37.500 0.00 0.00 0.00 4.17
4578 4852 7.759489 AAATCTGAAGGTACAACAATAGCAA 57.241 32.000 0.00 0.00 0.00 3.91
4579 4853 7.230510 ACAAAATCTGAAGGTACAACAATAGCA 59.769 33.333 0.00 0.00 0.00 3.49
4580 4854 7.593825 ACAAAATCTGAAGGTACAACAATAGC 58.406 34.615 0.00 0.00 0.00 2.97
4581 4855 9.612620 GAACAAAATCTGAAGGTACAACAATAG 57.387 33.333 0.00 0.00 0.00 1.73
4586 5237 7.703328 TGAAGAACAAAATCTGAAGGTACAAC 58.297 34.615 0.00 0.00 0.00 3.32
4596 5247 7.643764 ACAACACGTAATGAAGAACAAAATCTG 59.356 33.333 6.75 0.00 0.00 2.90
4605 5256 5.804692 ACAACACAACACGTAATGAAGAA 57.195 34.783 6.75 0.00 0.00 2.52
4622 5273 5.474189 GGTAGCAGGGTTATTTACAACAACA 59.526 40.000 0.00 0.00 0.00 3.33
4623 5274 5.474189 TGGTAGCAGGGTTATTTACAACAAC 59.526 40.000 0.00 0.00 0.00 3.32
4624 5275 5.632118 TGGTAGCAGGGTTATTTACAACAA 58.368 37.500 0.00 0.00 0.00 2.83
4625 5276 5.244189 TGGTAGCAGGGTTATTTACAACA 57.756 39.130 0.00 0.00 0.00 3.33
4626 5277 6.769134 AATGGTAGCAGGGTTATTTACAAC 57.231 37.500 0.00 0.00 0.00 3.32
4668 5319 5.864418 ACATCATCTAAAGCCTTACCGTA 57.136 39.130 0.00 0.00 0.00 4.02
4672 5323 6.663944 AACGAACATCATCTAAAGCCTTAC 57.336 37.500 0.00 0.00 0.00 2.34
4702 5368 8.435624 TTGCTCAACAAGAGGTATGAACCTAAC 61.436 40.741 0.00 0.00 44.63 2.34
4732 5398 5.032100 TCTCGTCATAGAACGCTATAAGC 57.968 43.478 0.00 0.00 42.31 3.09
4733 5399 7.353497 TCTTTCTCGTCATAGAACGCTATAAG 58.647 38.462 0.00 0.00 42.31 1.73
4740 5406 4.559251 CCAACTCTTTCTCGTCATAGAACG 59.441 45.833 0.00 0.00 43.92 3.95
4754 5420 8.914011 AGTATTAAAGAAAGCAACCAACTCTTT 58.086 29.630 0.00 0.00 39.18 2.52
4760 5426 7.722285 ACCTACAGTATTAAAGAAAGCAACCAA 59.278 33.333 0.00 0.00 0.00 3.67
4771 5437 6.127140 ACCCTGTGCTACCTACAGTATTAAAG 60.127 42.308 0.00 0.00 43.05 1.85
4777 5443 2.913603 ACCCTGTGCTACCTACAGTA 57.086 50.000 0.00 0.00 43.05 2.74
4778 5444 1.900486 GAACCCTGTGCTACCTACAGT 59.100 52.381 0.00 0.00 43.05 3.55
4779 5445 1.135083 CGAACCCTGTGCTACCTACAG 60.135 57.143 0.00 0.00 43.94 2.74
4780 5446 0.892755 CGAACCCTGTGCTACCTACA 59.107 55.000 0.00 0.00 0.00 2.74
4781 5447 0.175073 CCGAACCCTGTGCTACCTAC 59.825 60.000 0.00 0.00 0.00 3.18
4876 5542 2.380084 TAAGGTCGTTGCAGTCATCC 57.620 50.000 0.00 0.00 0.00 3.51
4877 5543 4.946784 AATTAAGGTCGTTGCAGTCATC 57.053 40.909 0.00 0.00 0.00 2.92


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.