Multiple sequence alignment - TraesCS3B01G562900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G562900 chr3B 100.000 3079 0 0 1 3079 795921158 795918080 0.000000e+00 5686.0
1 TraesCS3B01G562900 chr3B 95.117 983 43 3 988 1966 795913736 795914717 0.000000e+00 1544.0
2 TraesCS3B01G562900 chr3B 87.994 683 69 5 1293 1966 795280865 795281543 0.000000e+00 795.0
3 TraesCS3B01G562900 chr3B 80.541 370 40 17 915 1259 795280510 795280872 3.940000e-64 255.0
4 TraesCS3B01G562900 chr3B 85.000 100 12 3 2466 2563 545587265 545587167 7.030000e-17 99.0
5 TraesCS3B01G562900 chr3B 83.000 100 14 3 2466 2563 545514965 545514867 1.520000e-13 87.9
6 TraesCS3B01G562900 chr3A 90.206 1940 135 31 693 2612 724525640 724523736 0.000000e+00 2479.0
7 TraesCS3B01G562900 chr3A 90.453 1236 88 14 750 1966 724519111 724520335 0.000000e+00 1602.0
8 TraesCS3B01G562900 chr3A 86.441 885 91 8 1089 1966 724305446 724306308 0.000000e+00 942.0
9 TraesCS3B01G562900 chr3A 84.529 446 40 17 44 485 724526109 724525689 6.140000e-112 414.0
10 TraesCS3B01G562900 chr3A 83.794 253 19 14 44 292 724527666 724527432 1.440000e-53 220.0
11 TraesCS3B01G562900 chr3A 79.679 187 24 9 481 659 478255924 478255744 4.170000e-24 122.0
12 TraesCS3B01G562900 chr3D 94.133 1534 67 11 1047 2569 593261462 593259941 0.000000e+00 2313.0
13 TraesCS3B01G562900 chr3D 90.364 1235 75 24 750 1966 593244178 593245386 0.000000e+00 1581.0
14 TraesCS3B01G562900 chr3D 86.887 938 88 14 1042 1966 593078362 593079277 0.000000e+00 1018.0
15 TraesCS3B01G562900 chr3D 86.747 332 42 2 2568 2898 554951767 554952097 4.850000e-98 368.0
16 TraesCS3B01G562900 chr3D 87.170 265 19 5 693 951 593265186 593264931 1.400000e-73 287.0
17 TraesCS3B01G562900 chr3D 92.818 181 5 3 2900 3079 593259944 593259771 3.940000e-64 255.0
18 TraesCS3B01G562900 chr3D 81.707 328 30 15 175 497 593265519 593265217 2.370000e-61 246.0
19 TraesCS3B01G562900 chr3D 85.987 157 19 3 2743 2898 597927473 597927319 6.830000e-37 165.0
20 TraesCS3B01G562900 chr5B 95.161 186 2 3 481 661 710799936 710800119 1.400000e-73 287.0
21 TraesCS3B01G562900 chr2B 81.127 355 49 11 2564 2904 103193624 103193974 5.060000e-68 268.0
22 TraesCS3B01G562900 chr4B 92.147 191 8 5 477 663 276957622 276957809 2.350000e-66 263.0
23 TraesCS3B01G562900 chr4D 80.994 342 49 5 2568 2896 7033655 7033993 1.100000e-64 257.0
24 TraesCS3B01G562900 chr5A 79.300 343 56 9 2568 2898 1724699 1725038 3.090000e-55 226.0
25 TraesCS3B01G562900 chr2D 85.922 206 26 2 2365 2569 642302832 642302629 1.860000e-52 217.0
26 TraesCS3B01G562900 chr2D 78.333 360 56 11 2564 2904 67498417 67498061 2.410000e-51 213.0
27 TraesCS3B01G562900 chr2D 94.059 101 5 1 2466 2565 642302685 642302585 5.320000e-33 152.0
28 TraesCS3B01G562900 chr7D 91.447 152 13 0 2752 2903 128140141 128140292 3.110000e-50 209.0
29 TraesCS3B01G562900 chr7D 77.852 149 16 9 528 666 249489981 249489840 3.290000e-10 76.8
30 TraesCS3B01G562900 chr1B 85.806 155 22 0 2752 2906 26640560 26640406 6.830000e-37 165.0
31 TraesCS3B01G562900 chr6A 83.007 153 20 4 2752 2902 592444496 592444644 1.930000e-27 134.0
32 TraesCS3B01G562900 chr2A 91.860 86 7 0 2480 2565 767315394 767315309 1.500000e-23 121.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G562900 chr3B 795918080 795921158 3078 True 5686.000000 5686 100.000000 1 3079 1 chr3B.!!$R3 3078
1 TraesCS3B01G562900 chr3B 795913736 795914717 981 False 1544.000000 1544 95.117000 988 1966 1 chr3B.!!$F1 978
2 TraesCS3B01G562900 chr3B 795280510 795281543 1033 False 525.000000 795 84.267500 915 1966 2 chr3B.!!$F2 1051
3 TraesCS3B01G562900 chr3A 724519111 724520335 1224 False 1602.000000 1602 90.453000 750 1966 1 chr3A.!!$F2 1216
4 TraesCS3B01G562900 chr3A 724523736 724527666 3930 True 1037.666667 2479 86.176333 44 2612 3 chr3A.!!$R2 2568
5 TraesCS3B01G562900 chr3A 724305446 724306308 862 False 942.000000 942 86.441000 1089 1966 1 chr3A.!!$F1 877
6 TraesCS3B01G562900 chr3D 593244178 593245386 1208 False 1581.000000 1581 90.364000 750 1966 1 chr3D.!!$F3 1216
7 TraesCS3B01G562900 chr3D 593078362 593079277 915 False 1018.000000 1018 86.887000 1042 1966 1 chr3D.!!$F2 924
8 TraesCS3B01G562900 chr3D 593259771 593265519 5748 True 775.250000 2313 88.957000 175 3079 4 chr3D.!!$R2 2904

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
961 2569 0.025001 CCGTCGATCGTTGTTGCATC 59.975 55.0 15.94 0.0 37.94 3.91 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2804 7907 0.038159 CAGGAGCGACGAAGAGGTTT 60.038 55.0 0.0 0.0 0.0 3.27 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 9.987726 ATACTTACTAGTAGTTTCTAGGTTGGT 57.012 33.333 8.40 0.00 40.09 3.67
34 35 8.120140 ACTTACTAGTAGTTTCTAGGTTGGTG 57.880 38.462 8.40 0.00 40.97 4.17
35 36 7.946776 ACTTACTAGTAGTTTCTAGGTTGGTGA 59.053 37.037 8.40 0.00 40.97 4.02
36 37 8.890410 TTACTAGTAGTTTCTAGGTTGGTGAT 57.110 34.615 8.40 0.00 40.97 3.06
37 38 7.407393 ACTAGTAGTTTCTAGGTTGGTGATC 57.593 40.000 0.00 0.00 40.97 2.92
38 39 6.952358 ACTAGTAGTTTCTAGGTTGGTGATCA 59.048 38.462 0.00 0.00 40.97 2.92
39 40 6.875972 AGTAGTTTCTAGGTTGGTGATCAT 57.124 37.500 0.00 0.00 0.00 2.45
40 41 6.644347 AGTAGTTTCTAGGTTGGTGATCATG 58.356 40.000 0.00 0.00 0.00 3.07
41 42 5.505181 AGTTTCTAGGTTGGTGATCATGT 57.495 39.130 0.00 0.00 0.00 3.21
42 43 5.880901 AGTTTCTAGGTTGGTGATCATGTT 58.119 37.500 0.00 0.00 0.00 2.71
43 44 6.306987 AGTTTCTAGGTTGGTGATCATGTTT 58.693 36.000 0.00 0.00 0.00 2.83
44 45 6.431234 AGTTTCTAGGTTGGTGATCATGTTTC 59.569 38.462 0.00 0.00 0.00 2.78
45 46 5.497464 TCTAGGTTGGTGATCATGTTTCA 57.503 39.130 0.00 0.00 0.00 2.69
46 47 5.875224 TCTAGGTTGGTGATCATGTTTCAA 58.125 37.500 0.00 0.00 0.00 2.69
47 48 6.484288 TCTAGGTTGGTGATCATGTTTCAAT 58.516 36.000 0.00 0.00 0.00 2.57
48 49 5.395682 AGGTTGGTGATCATGTTTCAATG 57.604 39.130 0.00 0.00 0.00 2.82
49 50 4.834496 AGGTTGGTGATCATGTTTCAATGT 59.166 37.500 0.00 0.00 0.00 2.71
52 53 7.178983 AGGTTGGTGATCATGTTTCAATGTTAT 59.821 33.333 0.00 0.00 0.00 1.89
59 60 8.525316 TGATCATGTTTCAATGTTATCAGCTTT 58.475 29.630 0.00 0.00 0.00 3.51
60 61 9.362539 GATCATGTTTCAATGTTATCAGCTTTT 57.637 29.630 0.00 0.00 0.00 2.27
61 62 9.715121 ATCATGTTTCAATGTTATCAGCTTTTT 57.285 25.926 0.00 0.00 0.00 1.94
77 78 6.015180 TCAGCTTTTTGATAATGCTCCAACTT 60.015 34.615 0.00 0.00 0.00 2.66
81 82 5.726980 TTTGATAATGCTCCAACTTGCTT 57.273 34.783 0.00 0.00 0.00 3.91
82 83 4.970662 TGATAATGCTCCAACTTGCTTC 57.029 40.909 0.00 0.00 0.00 3.86
115 116 5.309543 TCATTTTCTCCCTACTTCTGGTTCA 59.690 40.000 0.00 0.00 0.00 3.18
150 152 3.071892 ACTGGAAACCGGTGTATTCTTGA 59.928 43.478 8.52 0.00 42.23 3.02
151 153 3.404899 TGGAAACCGGTGTATTCTTGAC 58.595 45.455 8.52 0.00 0.00 3.18
152 154 3.071892 TGGAAACCGGTGTATTCTTGACT 59.928 43.478 8.52 0.00 0.00 3.41
153 155 3.683340 GGAAACCGGTGTATTCTTGACTC 59.317 47.826 8.52 0.00 0.00 3.36
154 156 4.562963 GGAAACCGGTGTATTCTTGACTCT 60.563 45.833 8.52 0.00 0.00 3.24
155 157 4.618920 AACCGGTGTATTCTTGACTCTT 57.381 40.909 8.52 0.00 0.00 2.85
156 158 3.926616 ACCGGTGTATTCTTGACTCTTG 58.073 45.455 6.12 0.00 0.00 3.02
157 159 3.323979 ACCGGTGTATTCTTGACTCTTGT 59.676 43.478 6.12 0.00 0.00 3.16
158 160 4.202326 ACCGGTGTATTCTTGACTCTTGTT 60.202 41.667 6.12 0.00 0.00 2.83
159 161 4.152402 CCGGTGTATTCTTGACTCTTGTTG 59.848 45.833 0.00 0.00 0.00 3.33
160 162 4.988540 CGGTGTATTCTTGACTCTTGTTGA 59.011 41.667 0.00 0.00 0.00 3.18
162 164 5.106908 GGTGTATTCTTGACTCTTGTTGAGC 60.107 44.000 0.00 0.00 46.41 4.26
163 165 5.466728 GTGTATTCTTGACTCTTGTTGAGCA 59.533 40.000 0.00 0.00 46.41 4.26
164 166 6.148480 GTGTATTCTTGACTCTTGTTGAGCAT 59.852 38.462 0.00 0.00 46.41 3.79
171 173 8.886719 TCTTGACTCTTGTTGAGCATATTAATG 58.113 33.333 0.00 0.00 46.41 1.90
180 182 5.402054 TGAGCATATTAATGGAAAGGGGT 57.598 39.130 0.00 0.00 33.38 4.95
181 183 5.139727 TGAGCATATTAATGGAAAGGGGTG 58.860 41.667 0.00 0.00 33.38 4.61
182 184 3.897505 AGCATATTAATGGAAAGGGGTGC 59.102 43.478 0.00 0.00 33.38 5.01
184 186 2.938428 ATTAATGGAAAGGGGTGCCA 57.062 45.000 0.00 0.00 35.91 4.92
185 187 2.230130 TTAATGGAAAGGGGTGCCAG 57.770 50.000 0.00 0.00 34.74 4.85
186 188 0.324275 TAATGGAAAGGGGTGCCAGC 60.324 55.000 0.00 0.00 34.74 4.85
198 1758 2.888414 GGGTGCCAGCTTAAAACAGTAA 59.112 45.455 0.00 0.00 0.00 2.24
199 1759 3.305131 GGGTGCCAGCTTAAAACAGTAAC 60.305 47.826 0.00 0.00 0.00 2.50
305 1865 5.799936 ACGTAGCGATCATTTTTCCAAATTG 59.200 36.000 0.00 0.00 29.41 2.32
312 1872 6.455913 CGATCATTTTTCCAAATTGGTGATGC 60.456 38.462 16.56 9.38 39.03 3.91
329 1889 6.101332 GGTGATGCATGTTTTTCATACACAT 58.899 36.000 2.46 0.00 33.29 3.21
341 1901 5.590104 TTCATACACATGAACGTGAACAG 57.410 39.130 0.00 0.00 44.44 3.16
345 1905 4.273005 ACACATGAACGTGAACAGTTTC 57.727 40.909 0.00 0.00 39.34 2.78
346 1906 3.064820 ACACATGAACGTGAACAGTTTCC 59.935 43.478 0.00 0.00 39.34 3.13
351 1911 5.917541 TGAACGTGAACAGTTTCCTATTC 57.082 39.130 0.00 0.00 31.14 1.75
431 1993 5.640732 TCTGAAATAAAATTTCGGCTGCTC 58.359 37.500 13.86 0.00 35.37 4.26
450 2012 2.726760 CTCGTATGGAGCGCATTCTTAC 59.273 50.000 11.47 9.90 35.63 2.34
465 2027 3.678717 TTACGAGCACGCGAGAGGC 62.679 63.158 15.93 11.08 43.96 4.70
480 2042 3.807538 GGCTGGACGCATGCACTG 61.808 66.667 19.57 11.86 41.67 3.66
481 2043 2.743538 GCTGGACGCATGCACTGA 60.744 61.111 19.57 0.00 38.92 3.41
482 2044 2.747822 GCTGGACGCATGCACTGAG 61.748 63.158 19.57 8.84 38.92 3.35
483 2045 2.743538 TGGACGCATGCACTGAGC 60.744 61.111 19.57 0.00 45.96 4.26
484 2046 2.435586 GGACGCATGCACTGAGCT 60.436 61.111 19.57 0.00 45.94 4.09
485 2047 2.037136 GGACGCATGCACTGAGCTT 61.037 57.895 19.57 0.00 45.94 3.74
486 2048 1.580845 GGACGCATGCACTGAGCTTT 61.581 55.000 19.57 0.00 45.94 3.51
487 2049 0.453950 GACGCATGCACTGAGCTTTG 60.454 55.000 19.57 0.00 45.94 2.77
488 2050 1.800315 CGCATGCACTGAGCTTTGC 60.800 57.895 19.57 12.70 45.94 3.68
489 2051 1.585006 GCATGCACTGAGCTTTGCT 59.415 52.632 14.21 0.00 44.39 3.91
490 2052 0.806868 GCATGCACTGAGCTTTGCTA 59.193 50.000 14.21 4.70 44.39 3.49
491 2053 1.467035 GCATGCACTGAGCTTTGCTAC 60.467 52.381 14.21 3.67 44.39 3.58
492 2054 1.808343 CATGCACTGAGCTTTGCTACA 59.192 47.619 14.71 0.00 45.94 2.74
493 2055 1.229428 TGCACTGAGCTTTGCTACAC 58.771 50.000 14.71 0.00 45.94 2.90
494 2056 0.519077 GCACTGAGCTTTGCTACACC 59.481 55.000 8.28 0.00 39.88 4.16
495 2057 1.879796 GCACTGAGCTTTGCTACACCT 60.880 52.381 8.28 0.00 39.88 4.00
496 2058 2.612972 GCACTGAGCTTTGCTACACCTA 60.613 50.000 8.28 0.00 39.88 3.08
497 2059 2.996621 CACTGAGCTTTGCTACACCTAC 59.003 50.000 0.00 0.00 39.88 3.18
498 2060 2.263077 CTGAGCTTTGCTACACCTACG 58.737 52.381 0.00 0.00 39.88 3.51
499 2061 1.616865 TGAGCTTTGCTACACCTACGT 59.383 47.619 0.00 0.00 39.88 3.57
500 2062 2.821378 TGAGCTTTGCTACACCTACGTA 59.179 45.455 0.00 0.00 39.88 3.57
501 2063 3.177487 GAGCTTTGCTACACCTACGTAC 58.823 50.000 0.00 0.00 39.88 3.67
502 2064 2.559668 AGCTTTGCTACACCTACGTACA 59.440 45.455 0.00 0.00 36.99 2.90
503 2065 2.665052 GCTTTGCTACACCTACGTACAC 59.335 50.000 0.00 0.00 0.00 2.90
504 2066 3.858129 GCTTTGCTACACCTACGTACACA 60.858 47.826 0.00 0.00 0.00 3.72
505 2067 4.491676 CTTTGCTACACCTACGTACACAT 58.508 43.478 0.00 0.00 0.00 3.21
506 2068 4.524316 TTGCTACACCTACGTACACATT 57.476 40.909 0.00 0.00 0.00 2.71
507 2069 5.641783 TTGCTACACCTACGTACACATTA 57.358 39.130 0.00 0.00 0.00 1.90
508 2070 5.840243 TGCTACACCTACGTACACATTAT 57.160 39.130 0.00 0.00 0.00 1.28
509 2071 6.211587 TGCTACACCTACGTACACATTATT 57.788 37.500 0.00 0.00 0.00 1.40
510 2072 7.332213 TGCTACACCTACGTACACATTATTA 57.668 36.000 0.00 0.00 0.00 0.98
511 2073 7.195646 TGCTACACCTACGTACACATTATTAC 58.804 38.462 0.00 0.00 0.00 1.89
512 2074 7.148103 TGCTACACCTACGTACACATTATTACA 60.148 37.037 0.00 0.00 0.00 2.41
513 2075 7.864379 GCTACACCTACGTACACATTATTACAT 59.136 37.037 0.00 0.00 0.00 2.29
516 2078 9.520204 ACACCTACGTACACATTATTACATAAC 57.480 33.333 0.00 0.00 0.00 1.89
517 2079 9.740239 CACCTACGTACACATTATTACATAACT 57.260 33.333 0.00 0.00 0.00 2.24
533 2095 5.903810 ACATAACTTACGAAGAGGATGACC 58.096 41.667 0.00 0.00 0.00 4.02
542 2104 4.257890 AGGATGACCTGGCCTGTT 57.742 55.556 3.32 0.00 45.92 3.16
543 2105 2.479562 AGGATGACCTGGCCTGTTT 58.520 52.632 3.32 0.00 45.92 2.83
544 2106 0.779997 AGGATGACCTGGCCTGTTTT 59.220 50.000 3.32 0.00 45.92 2.43
545 2107 0.890683 GGATGACCTGGCCTGTTTTG 59.109 55.000 3.32 0.00 0.00 2.44
546 2108 0.890683 GATGACCTGGCCTGTTTTGG 59.109 55.000 3.32 0.00 0.00 3.28
547 2109 0.188342 ATGACCTGGCCTGTTTTGGT 59.812 50.000 3.32 2.44 0.00 3.67
548 2110 0.032615 TGACCTGGCCTGTTTTGGTT 60.033 50.000 3.32 0.00 0.00 3.67
549 2111 0.389025 GACCTGGCCTGTTTTGGTTG 59.611 55.000 3.32 0.00 0.00 3.77
550 2112 1.048160 ACCTGGCCTGTTTTGGTTGG 61.048 55.000 3.32 0.00 0.00 3.77
551 2113 0.758685 CCTGGCCTGTTTTGGTTGGA 60.759 55.000 3.32 0.00 0.00 3.53
552 2114 1.118838 CTGGCCTGTTTTGGTTGGAA 58.881 50.000 3.32 0.00 0.00 3.53
553 2115 1.069049 CTGGCCTGTTTTGGTTGGAAG 59.931 52.381 3.32 0.00 0.00 3.46
554 2116 1.119684 GGCCTGTTTTGGTTGGAAGT 58.880 50.000 0.00 0.00 0.00 3.01
555 2117 1.484653 GGCCTGTTTTGGTTGGAAGTT 59.515 47.619 0.00 0.00 0.00 2.66
556 2118 2.696187 GGCCTGTTTTGGTTGGAAGTTA 59.304 45.455 0.00 0.00 0.00 2.24
557 2119 3.133183 GGCCTGTTTTGGTTGGAAGTTAA 59.867 43.478 0.00 0.00 0.00 2.01
558 2120 4.368315 GCCTGTTTTGGTTGGAAGTTAAG 58.632 43.478 0.00 0.00 0.00 1.85
559 2121 4.098807 GCCTGTTTTGGTTGGAAGTTAAGA 59.901 41.667 0.00 0.00 0.00 2.10
560 2122 5.394773 GCCTGTTTTGGTTGGAAGTTAAGAA 60.395 40.000 0.00 0.00 0.00 2.52
561 2123 6.273071 CCTGTTTTGGTTGGAAGTTAAGAAG 58.727 40.000 0.00 0.00 0.00 2.85
562 2124 6.215495 TGTTTTGGTTGGAAGTTAAGAAGG 57.785 37.500 0.00 0.00 0.00 3.46
563 2125 4.929819 TTTGGTTGGAAGTTAAGAAGGC 57.070 40.909 0.00 0.00 0.00 4.35
564 2126 2.871453 TGGTTGGAAGTTAAGAAGGCC 58.129 47.619 0.00 0.00 0.00 5.19
565 2127 2.168496 GGTTGGAAGTTAAGAAGGCCC 58.832 52.381 0.00 0.00 0.00 5.80
566 2128 2.490168 GGTTGGAAGTTAAGAAGGCCCA 60.490 50.000 0.00 0.00 0.00 5.36
567 2129 2.820197 GTTGGAAGTTAAGAAGGCCCAG 59.180 50.000 0.00 0.00 0.00 4.45
568 2130 1.354368 TGGAAGTTAAGAAGGCCCAGG 59.646 52.381 0.00 0.00 0.00 4.45
569 2131 1.464734 GAAGTTAAGAAGGCCCAGGC 58.535 55.000 0.00 0.00 41.06 4.85
582 2144 4.278513 CAGGCCCACCCCGTGAAA 62.279 66.667 0.00 0.00 35.23 2.69
583 2145 3.503839 AGGCCCACCCCGTGAAAA 61.504 61.111 0.00 0.00 35.23 2.29
584 2146 2.283604 GGCCCACCCCGTGAAAAT 60.284 61.111 0.00 0.00 35.23 1.82
585 2147 2.348104 GGCCCACCCCGTGAAAATC 61.348 63.158 0.00 0.00 35.23 2.17
586 2148 1.605165 GCCCACCCCGTGAAAATCA 60.605 57.895 0.00 0.00 35.23 2.57
587 2149 1.595093 GCCCACCCCGTGAAAATCAG 61.595 60.000 0.00 0.00 35.23 2.90
588 2150 0.965363 CCCACCCCGTGAAAATCAGG 60.965 60.000 0.00 0.00 35.23 3.86
605 2167 2.919043 GGGGGAGCGATGATTGGT 59.081 61.111 0.00 0.00 0.00 3.67
606 2168 1.227383 GGGGGAGCGATGATTGGTT 59.773 57.895 0.00 0.00 0.00 3.67
607 2169 1.103398 GGGGGAGCGATGATTGGTTG 61.103 60.000 0.00 0.00 0.00 3.77
608 2170 0.107214 GGGGAGCGATGATTGGTTGA 60.107 55.000 0.00 0.00 0.00 3.18
609 2171 1.303309 GGGAGCGATGATTGGTTGAG 58.697 55.000 0.00 0.00 0.00 3.02
610 2172 1.303309 GGAGCGATGATTGGTTGAGG 58.697 55.000 0.00 0.00 0.00 3.86
611 2173 0.659957 GAGCGATGATTGGTTGAGGC 59.340 55.000 0.00 0.00 0.00 4.70
612 2174 0.035152 AGCGATGATTGGTTGAGGCA 60.035 50.000 0.00 0.00 0.00 4.75
613 2175 0.379669 GCGATGATTGGTTGAGGCAG 59.620 55.000 0.00 0.00 0.00 4.85
614 2176 1.019673 CGATGATTGGTTGAGGCAGG 58.980 55.000 0.00 0.00 0.00 4.85
615 2177 1.679944 CGATGATTGGTTGAGGCAGGT 60.680 52.381 0.00 0.00 0.00 4.00
616 2178 2.019984 GATGATTGGTTGAGGCAGGTC 58.980 52.381 0.00 0.00 0.00 3.85
617 2179 0.770499 TGATTGGTTGAGGCAGGTCA 59.230 50.000 0.00 0.00 0.00 4.02
618 2180 1.271543 TGATTGGTTGAGGCAGGTCAG 60.272 52.381 0.00 0.00 0.00 3.51
619 2181 1.003580 GATTGGTTGAGGCAGGTCAGA 59.996 52.381 0.00 0.00 0.00 3.27
620 2182 0.843309 TTGGTTGAGGCAGGTCAGAA 59.157 50.000 0.00 0.00 0.00 3.02
621 2183 0.108585 TGGTTGAGGCAGGTCAGAAC 59.891 55.000 0.00 0.00 0.00 3.01
622 2184 0.951040 GGTTGAGGCAGGTCAGAACG 60.951 60.000 0.00 0.00 0.00 3.95
623 2185 0.249911 GTTGAGGCAGGTCAGAACGT 60.250 55.000 0.00 0.00 0.00 3.99
624 2186 1.000506 GTTGAGGCAGGTCAGAACGTA 59.999 52.381 0.00 0.00 0.00 3.57
625 2187 1.334160 TGAGGCAGGTCAGAACGTAA 58.666 50.000 0.00 0.00 0.00 3.18
626 2188 1.000506 TGAGGCAGGTCAGAACGTAAC 59.999 52.381 0.00 0.00 0.00 2.50
627 2189 1.272769 GAGGCAGGTCAGAACGTAACT 59.727 52.381 0.00 0.00 0.00 2.24
628 2190 1.692519 AGGCAGGTCAGAACGTAACTT 59.307 47.619 0.00 0.00 0.00 2.66
629 2191 2.104281 AGGCAGGTCAGAACGTAACTTT 59.896 45.455 0.00 0.00 0.00 2.66
630 2192 3.322828 AGGCAGGTCAGAACGTAACTTTA 59.677 43.478 0.00 0.00 0.00 1.85
631 2193 3.431233 GGCAGGTCAGAACGTAACTTTAC 59.569 47.826 0.00 0.00 0.00 2.01
647 2209 8.842942 GTAACTTTACGGTACTTATGTAGGTC 57.157 38.462 0.00 0.00 0.00 3.85
648 2210 7.709149 AACTTTACGGTACTTATGTAGGTCT 57.291 36.000 0.00 0.00 0.00 3.85
649 2211 8.807948 AACTTTACGGTACTTATGTAGGTCTA 57.192 34.615 0.00 0.00 0.00 2.59
650 2212 8.443953 ACTTTACGGTACTTATGTAGGTCTAG 57.556 38.462 0.00 0.00 0.00 2.43
651 2213 6.867662 TTACGGTACTTATGTAGGTCTAGC 57.132 41.667 0.00 0.00 0.00 3.42
652 2214 4.785301 ACGGTACTTATGTAGGTCTAGCA 58.215 43.478 0.00 0.00 0.00 3.49
653 2215 5.383476 ACGGTACTTATGTAGGTCTAGCAT 58.617 41.667 0.00 0.00 0.00 3.79
654 2216 5.832060 ACGGTACTTATGTAGGTCTAGCATT 59.168 40.000 0.00 0.00 0.00 3.56
655 2217 6.323225 ACGGTACTTATGTAGGTCTAGCATTT 59.677 38.462 0.00 0.00 0.00 2.32
656 2218 7.147776 ACGGTACTTATGTAGGTCTAGCATTTT 60.148 37.037 0.00 0.00 0.00 1.82
657 2219 7.709613 CGGTACTTATGTAGGTCTAGCATTTTT 59.290 37.037 0.00 0.00 0.00 1.94
658 2220 8.827677 GGTACTTATGTAGGTCTAGCATTTTTG 58.172 37.037 0.00 0.00 0.00 2.44
674 2236 4.560743 TGGTGCTCCGTGCTTGCA 62.561 61.111 0.00 0.00 43.37 4.08
686 2248 6.096673 TCCGTGCTTGCATAGAAGAATATA 57.903 37.500 0.00 0.00 0.00 0.86
687 2249 6.701340 TCCGTGCTTGCATAGAAGAATATAT 58.299 36.000 0.00 0.00 0.00 0.86
688 2250 6.591448 TCCGTGCTTGCATAGAAGAATATATG 59.409 38.462 0.00 0.00 33.41 1.78
716 2298 4.830826 AGGAAACGAGCTCGAAAATTTT 57.169 36.364 40.58 28.41 43.02 1.82
717 2299 5.934935 AGGAAACGAGCTCGAAAATTTTA 57.065 34.783 40.58 0.00 43.02 1.52
719 2301 6.731164 AGGAAACGAGCTCGAAAATTTTAAA 58.269 32.000 40.58 0.00 43.02 1.52
720 2302 7.368059 AGGAAACGAGCTCGAAAATTTTAAAT 58.632 30.769 40.58 16.14 43.02 1.40
721 2303 7.865889 AGGAAACGAGCTCGAAAATTTTAAATT 59.134 29.630 40.58 17.77 43.02 1.82
723 2305 9.289999 GAAACGAGCTCGAAAATTTTAAATTTG 57.710 29.630 40.58 7.43 43.02 2.32
724 2306 7.924103 ACGAGCTCGAAAATTTTAAATTTGT 57.076 28.000 40.58 10.63 43.02 2.83
725 2307 9.453325 AACGAGCTCGAAAATTTTAAATTTGTA 57.547 25.926 40.58 4.80 43.02 2.41
726 2308 8.898792 ACGAGCTCGAAAATTTTAAATTTGTAC 58.101 29.630 40.58 9.67 43.02 2.90
866 2468 4.235762 CCGGGCTGGATACCACCG 62.236 72.222 6.48 11.25 41.11 4.94
867 2469 4.910585 CGGGCTGGATACCACCGC 62.911 72.222 6.84 1.20 36.61 5.68
868 2470 4.910585 GGGCTGGATACCACCGCG 62.911 72.222 0.00 0.00 33.07 6.46
925 2529 0.953471 GCACCACACACCAATCGCTA 60.953 55.000 0.00 0.00 0.00 4.26
954 2562 1.516386 CACCCTCCGTCGATCGTTG 60.516 63.158 15.94 8.63 37.94 4.10
958 2566 1.683790 CCTCCGTCGATCGTTGTTGC 61.684 60.000 15.94 0.00 37.94 4.17
959 2567 1.006825 CTCCGTCGATCGTTGTTGCA 61.007 55.000 15.94 0.00 37.94 4.08
960 2568 0.389296 TCCGTCGATCGTTGTTGCAT 60.389 50.000 15.94 0.00 37.94 3.96
961 2569 0.025001 CCGTCGATCGTTGTTGCATC 59.975 55.000 15.94 0.00 37.94 3.91
962 2570 0.025001 CGTCGATCGTTGTTGCATCC 59.975 55.000 15.94 0.00 34.52 3.51
963 2571 1.075542 GTCGATCGTTGTTGCATCCA 58.924 50.000 15.94 0.00 0.00 3.41
964 2572 1.075542 TCGATCGTTGTTGCATCCAC 58.924 50.000 15.94 0.00 0.00 4.02
965 2573 0.795698 CGATCGTTGTTGCATCCACA 59.204 50.000 7.03 0.00 0.00 4.17
966 2574 1.464023 CGATCGTTGTTGCATCCACAC 60.464 52.381 7.03 0.00 0.00 3.82
967 2575 1.535028 GATCGTTGTTGCATCCACACA 59.465 47.619 0.00 0.00 0.00 3.72
968 2576 0.943673 TCGTTGTTGCATCCACACAG 59.056 50.000 0.00 0.00 0.00 3.66
969 2577 0.661187 CGTTGTTGCATCCACACAGC 60.661 55.000 0.00 0.00 0.00 4.40
970 2578 0.661187 GTTGTTGCATCCACACAGCG 60.661 55.000 0.00 0.00 0.00 5.18
971 2579 2.126734 GTTGCATCCACACAGCGC 60.127 61.111 0.00 0.00 0.00 5.92
972 2580 2.281692 TTGCATCCACACAGCGCT 60.282 55.556 2.64 2.64 0.00 5.92
973 2581 2.327343 TTGCATCCACACAGCGCTC 61.327 57.895 7.13 0.00 0.00 5.03
974 2582 3.503363 GCATCCACACAGCGCTCC 61.503 66.667 7.13 0.00 0.00 4.70
975 2583 3.190849 CATCCACACAGCGCTCCG 61.191 66.667 7.13 3.43 0.00 4.63
986 2594 2.336809 CGCTCCGCTCTCATACCC 59.663 66.667 0.00 0.00 0.00 3.69
1003 2641 1.339055 ACCCCATCACGACATTCACAG 60.339 52.381 0.00 0.00 0.00 3.66
1018 2656 3.726291 TCACAGTCGATCAAGTCACAA 57.274 42.857 0.00 0.00 0.00 3.33
1624 6711 2.752238 CTCCTCGTCGGGCAGTCT 60.752 66.667 0.00 0.00 0.00 3.24
1760 6847 1.945354 GCAGCGCTACTACCACCTCA 61.945 60.000 10.99 0.00 0.00 3.86
1980 7073 1.341606 GTGCTCAAGTCTGCTACGAC 58.658 55.000 0.00 0.00 0.00 4.34
2014 7107 6.723977 TCCTGAGCACCATACATACATACATA 59.276 38.462 0.00 0.00 0.00 2.29
2015 7108 6.813649 CCTGAGCACCATACATACATACATAC 59.186 42.308 0.00 0.00 0.00 2.39
2016 7109 7.296628 TGAGCACCATACATACATACATACA 57.703 36.000 0.00 0.00 0.00 2.29
2017 7110 7.906327 TGAGCACCATACATACATACATACAT 58.094 34.615 0.00 0.00 0.00 2.29
2018 7111 9.030452 TGAGCACCATACATACATACATACATA 57.970 33.333 0.00 0.00 0.00 2.29
2019 7112 9.302345 GAGCACCATACATACATACATACATAC 57.698 37.037 0.00 0.00 0.00 2.39
2020 7113 8.811994 AGCACCATACATACATACATACATACA 58.188 33.333 0.00 0.00 0.00 2.29
2021 7114 9.599866 GCACCATACATACATACATACATACAT 57.400 33.333 0.00 0.00 0.00 2.29
2159 7252 4.831674 TTGATCACCTCATGACAGATGT 57.168 40.909 0.00 0.00 41.24 3.06
2171 7264 7.365497 TCATGACAGATGTATGGTGACTTAT 57.635 36.000 0.00 0.00 0.00 1.73
2352 7450 6.016024 AGTGCACACATACAGAATCAACAATT 60.016 34.615 21.04 0.00 0.00 2.32
2377 7477 6.980051 AAAAACTATCCACTTTAGCTACGG 57.020 37.500 0.00 0.00 0.00 4.02
2389 7489 2.698855 AGCTACGGGTAAGTCGTCTA 57.301 50.000 0.00 0.00 41.38 2.59
2427 7527 8.293867 TGAATAAGTCAATTTTCTAACCGTTGG 58.706 33.333 0.00 0.00 31.51 3.77
2458 7560 9.698309 TTTGTCAAGATTTGTGTTGTTTTCTTA 57.302 25.926 0.00 0.00 0.00 2.10
2467 7569 8.649973 TTTGTGTTGTTTTCTTACTTGTGTTT 57.350 26.923 0.00 0.00 0.00 2.83
2612 7715 2.563471 AAAACCACACGCGCTAAAAA 57.437 40.000 5.73 0.00 0.00 1.94
2613 7716 2.785713 AAACCACACGCGCTAAAAAT 57.214 40.000 5.73 0.00 0.00 1.82
2614 7717 2.325509 AACCACACGCGCTAAAAATC 57.674 45.000 5.73 0.00 0.00 2.17
2615 7718 1.231221 ACCACACGCGCTAAAAATCA 58.769 45.000 5.73 0.00 0.00 2.57
2616 7719 1.810151 ACCACACGCGCTAAAAATCAT 59.190 42.857 5.73 0.00 0.00 2.45
2617 7720 2.227865 ACCACACGCGCTAAAAATCATT 59.772 40.909 5.73 0.00 0.00 2.57
2618 7721 2.593775 CCACACGCGCTAAAAATCATTG 59.406 45.455 5.73 0.00 0.00 2.82
2619 7722 3.233578 CACACGCGCTAAAAATCATTGT 58.766 40.909 5.73 0.00 0.00 2.71
2620 7723 3.668191 CACACGCGCTAAAAATCATTGTT 59.332 39.130 5.73 0.00 0.00 2.83
2621 7724 4.148000 CACACGCGCTAAAAATCATTGTTT 59.852 37.500 5.73 0.00 0.00 2.83
2622 7725 4.742659 ACACGCGCTAAAAATCATTGTTTT 59.257 33.333 5.73 0.00 32.94 2.43
2623 7726 5.108027 ACACGCGCTAAAAATCATTGTTTTC 60.108 36.000 5.73 0.00 31.29 2.29
2624 7727 4.979197 ACGCGCTAAAAATCATTGTTTTCA 59.021 33.333 5.73 0.00 31.29 2.69
2625 7728 5.633182 ACGCGCTAAAAATCATTGTTTTCAT 59.367 32.000 5.73 0.00 31.29 2.57
2626 7729 5.947519 CGCGCTAAAAATCATTGTTTTCATG 59.052 36.000 5.56 0.00 31.29 3.07
2627 7730 5.729424 GCGCTAAAAATCATTGTTTTCATGC 59.271 36.000 0.00 0.00 31.29 4.06
2628 7731 6.618166 GCGCTAAAAATCATTGTTTTCATGCA 60.618 34.615 0.00 0.00 31.29 3.96
2629 7732 6.733280 CGCTAAAAATCATTGTTTTCATGCAC 59.267 34.615 0.00 0.00 31.29 4.57
2630 7733 7.017055 GCTAAAAATCATTGTTTTCATGCACC 58.983 34.615 0.00 0.00 31.29 5.01
2631 7734 5.594724 AAAATCATTGTTTTCATGCACCG 57.405 34.783 0.00 0.00 0.00 4.94
2632 7735 2.721274 TCATTGTTTTCATGCACCGG 57.279 45.000 0.00 0.00 0.00 5.28
2633 7736 2.234143 TCATTGTTTTCATGCACCGGA 58.766 42.857 9.46 0.00 0.00 5.14
2634 7737 2.228582 TCATTGTTTTCATGCACCGGAG 59.771 45.455 9.46 0.00 0.00 4.63
2635 7738 1.974265 TTGTTTTCATGCACCGGAGA 58.026 45.000 9.46 0.00 0.00 3.71
2636 7739 1.234821 TGTTTTCATGCACCGGAGAC 58.765 50.000 9.46 0.00 0.00 3.36
2637 7740 1.234821 GTTTTCATGCACCGGAGACA 58.765 50.000 9.46 2.78 0.00 3.41
2638 7741 1.606668 GTTTTCATGCACCGGAGACAA 59.393 47.619 9.46 0.00 0.00 3.18
2639 7742 1.974265 TTTCATGCACCGGAGACAAA 58.026 45.000 9.46 0.00 0.00 2.83
2640 7743 1.974265 TTCATGCACCGGAGACAAAA 58.026 45.000 9.46 0.00 0.00 2.44
2641 7744 1.974265 TCATGCACCGGAGACAAAAA 58.026 45.000 9.46 0.00 0.00 1.94
2655 7758 2.904866 AAAAACAGCGCTCCGGCA 60.905 55.556 7.13 0.00 38.60 5.69
2656 7759 2.908073 AAAAACAGCGCTCCGGCAG 61.908 57.895 7.13 0.00 38.60 4.85
2657 7760 3.825160 AAAACAGCGCTCCGGCAGA 62.825 57.895 7.13 0.00 38.60 4.26
2671 7774 2.883574 CGGCAGACGGTGTAAAATAGA 58.116 47.619 0.00 0.00 39.42 1.98
2672 7775 2.858344 CGGCAGACGGTGTAAAATAGAG 59.142 50.000 0.00 0.00 39.42 2.43
2673 7776 2.608090 GGCAGACGGTGTAAAATAGAGC 59.392 50.000 0.00 0.00 0.00 4.09
2674 7777 3.259064 GCAGACGGTGTAAAATAGAGCA 58.741 45.455 0.00 0.00 0.00 4.26
2675 7778 3.871594 GCAGACGGTGTAAAATAGAGCAT 59.128 43.478 0.00 0.00 0.00 3.79
2676 7779 4.260375 GCAGACGGTGTAAAATAGAGCATG 60.260 45.833 0.00 0.00 0.00 4.06
2677 7780 3.871594 AGACGGTGTAAAATAGAGCATGC 59.128 43.478 10.51 10.51 0.00 4.06
2678 7781 3.605634 ACGGTGTAAAATAGAGCATGCA 58.394 40.909 21.98 0.00 0.00 3.96
2679 7782 3.374058 ACGGTGTAAAATAGAGCATGCAC 59.626 43.478 21.98 14.59 0.00 4.57
2680 7783 3.373748 CGGTGTAAAATAGAGCATGCACA 59.626 43.478 21.98 9.85 0.00 4.57
2681 7784 4.142708 CGGTGTAAAATAGAGCATGCACAA 60.143 41.667 21.98 4.23 0.00 3.33
2682 7785 5.618863 CGGTGTAAAATAGAGCATGCACAAA 60.619 40.000 21.98 6.56 0.00 2.83
2683 7786 6.155827 GGTGTAAAATAGAGCATGCACAAAA 58.844 36.000 21.98 3.84 0.00 2.44
2684 7787 6.644592 GGTGTAAAATAGAGCATGCACAAAAA 59.355 34.615 21.98 1.19 0.00 1.94
2685 7788 7.331687 GGTGTAAAATAGAGCATGCACAAAAAT 59.668 33.333 21.98 3.62 0.00 1.82
2686 7789 8.375465 GTGTAAAATAGAGCATGCACAAAAATC 58.625 33.333 21.98 6.60 0.00 2.17
2687 7790 8.306038 TGTAAAATAGAGCATGCACAAAAATCT 58.694 29.630 21.98 14.10 0.00 2.40
2688 7791 9.143631 GTAAAATAGAGCATGCACAAAAATCTT 57.856 29.630 21.98 4.47 0.00 2.40
2689 7792 8.611654 AAAATAGAGCATGCACAAAAATCTTT 57.388 26.923 21.98 4.29 0.00 2.52
2690 7793 9.709495 AAAATAGAGCATGCACAAAAATCTTTA 57.291 25.926 21.98 0.00 0.00 1.85
2691 7794 8.922058 AATAGAGCATGCACAAAAATCTTTAG 57.078 30.769 21.98 0.00 0.00 1.85
2692 7795 5.166398 AGAGCATGCACAAAAATCTTTAGC 58.834 37.500 21.98 0.00 0.00 3.09
2693 7796 3.922240 AGCATGCACAAAAATCTTTAGCG 59.078 39.130 21.98 0.00 31.01 4.26
2694 7797 3.482436 GCATGCACAAAAATCTTTAGCGC 60.482 43.478 14.21 0.00 31.01 5.92
2695 7798 3.361794 TGCACAAAAATCTTTAGCGCA 57.638 38.095 11.47 0.00 31.01 6.09
2696 7799 3.049206 TGCACAAAAATCTTTAGCGCAC 58.951 40.909 11.47 0.00 31.01 5.34
2697 7800 2.088969 GCACAAAAATCTTTAGCGCACG 59.911 45.455 11.47 0.00 0.00 5.34
2698 7801 2.656422 CACAAAAATCTTTAGCGCACGG 59.344 45.455 11.47 0.00 0.00 4.94
2699 7802 2.250188 CAAAAATCTTTAGCGCACGGG 58.750 47.619 11.47 0.00 0.00 5.28
2700 7803 1.530323 AAAATCTTTAGCGCACGGGT 58.470 45.000 11.47 0.00 0.00 5.28
2701 7804 0.802494 AAATCTTTAGCGCACGGGTG 59.198 50.000 11.47 0.00 0.00 4.61
2702 7805 0.321298 AATCTTTAGCGCACGGGTGT 60.321 50.000 11.47 0.00 0.00 4.16
2731 7834 2.951269 TGCTGGACTGCAGATTTGG 58.049 52.632 23.35 7.36 38.12 3.28
2732 7835 0.609957 TGCTGGACTGCAGATTTGGG 60.610 55.000 23.35 6.28 38.12 4.12
2733 7836 1.941999 GCTGGACTGCAGATTTGGGC 61.942 60.000 23.35 12.41 0.00 5.36
2734 7837 1.304381 TGGACTGCAGATTTGGGCC 60.304 57.895 23.35 2.85 0.00 5.80
2735 7838 2.409870 GGACTGCAGATTTGGGCCG 61.410 63.158 23.35 0.00 0.00 6.13
2736 7839 3.056313 GACTGCAGATTTGGGCCGC 62.056 63.158 23.35 0.00 0.00 6.53
2737 7840 3.830192 CTGCAGATTTGGGCCGCC 61.830 66.667 8.42 0.00 0.00 6.13
2740 7843 4.794648 CAGATTTGGGCCGCCGGA 62.795 66.667 7.68 0.00 0.00 5.14
2741 7844 3.809013 AGATTTGGGCCGCCGGAT 61.809 61.111 7.68 0.00 0.00 4.18
2742 7845 2.833121 GATTTGGGCCGCCGGATT 60.833 61.111 7.68 0.00 0.00 3.01
2743 7846 3.137637 GATTTGGGCCGCCGGATTG 62.138 63.158 7.68 0.00 0.00 2.67
2744 7847 3.955543 ATTTGGGCCGCCGGATTGT 62.956 57.895 7.68 0.00 0.00 2.71
2790 7893 2.679996 GGATTGGGCGCTGGGTTT 60.680 61.111 7.64 0.00 0.00 3.27
2791 7894 2.282783 GGATTGGGCGCTGGGTTTT 61.283 57.895 7.64 0.00 0.00 2.43
2792 7895 1.671166 GATTGGGCGCTGGGTTTTT 59.329 52.632 7.64 0.00 0.00 1.94
2793 7896 0.892063 GATTGGGCGCTGGGTTTTTA 59.108 50.000 7.64 0.00 0.00 1.52
2794 7897 1.480545 GATTGGGCGCTGGGTTTTTAT 59.519 47.619 7.64 0.00 0.00 1.40
2795 7898 0.605589 TTGGGCGCTGGGTTTTTATG 59.394 50.000 7.64 0.00 0.00 1.90
2796 7899 1.153647 GGGCGCTGGGTTTTTATGC 60.154 57.895 7.64 0.00 0.00 3.14
2797 7900 1.589113 GGCGCTGGGTTTTTATGCA 59.411 52.632 7.64 0.00 0.00 3.96
2798 7901 0.175531 GGCGCTGGGTTTTTATGCAT 59.824 50.000 7.64 3.79 0.00 3.96
2799 7902 1.405391 GGCGCTGGGTTTTTATGCATT 60.405 47.619 3.54 0.00 0.00 3.56
2800 7903 2.345876 GCGCTGGGTTTTTATGCATTT 58.654 42.857 3.54 0.00 0.00 2.32
2801 7904 2.094099 GCGCTGGGTTTTTATGCATTTG 59.906 45.455 3.54 0.00 0.00 2.32
2802 7905 2.672381 CGCTGGGTTTTTATGCATTTGG 59.328 45.455 3.54 0.00 0.00 3.28
2803 7906 3.616076 CGCTGGGTTTTTATGCATTTGGA 60.616 43.478 3.54 0.00 0.00 3.53
2804 7907 4.322567 GCTGGGTTTTTATGCATTTGGAA 58.677 39.130 3.54 0.00 0.00 3.53
2805 7908 4.759183 GCTGGGTTTTTATGCATTTGGAAA 59.241 37.500 3.54 0.00 0.00 3.13
2806 7909 5.240403 GCTGGGTTTTTATGCATTTGGAAAA 59.760 36.000 3.54 2.43 0.00 2.29
2807 7910 6.625873 TGGGTTTTTATGCATTTGGAAAAC 57.374 33.333 20.43 20.43 38.69 2.43
2811 7914 7.728847 GTTTTTATGCATTTGGAAAACCTCT 57.271 32.000 3.54 0.00 35.34 3.69
2812 7915 8.153479 GTTTTTATGCATTTGGAAAACCTCTT 57.847 30.769 3.54 0.00 35.34 2.85
2813 7916 7.961325 TTTTATGCATTTGGAAAACCTCTTC 57.039 32.000 3.54 0.00 0.00 2.87
2814 7917 3.641437 TGCATTTGGAAAACCTCTTCG 57.359 42.857 0.00 0.00 0.00 3.79
2815 7918 2.955660 TGCATTTGGAAAACCTCTTCGT 59.044 40.909 0.00 0.00 0.00 3.85
2816 7919 3.004315 TGCATTTGGAAAACCTCTTCGTC 59.996 43.478 0.00 0.00 0.00 4.20
2817 7920 3.810373 CATTTGGAAAACCTCTTCGTCG 58.190 45.455 0.00 0.00 0.00 5.12
2818 7921 1.223187 TTGGAAAACCTCTTCGTCGC 58.777 50.000 0.00 0.00 0.00 5.19
2819 7922 0.391597 TGGAAAACCTCTTCGTCGCT 59.608 50.000 0.00 0.00 0.00 4.93
2820 7923 1.069255 GGAAAACCTCTTCGTCGCTC 58.931 55.000 0.00 0.00 0.00 5.03
2821 7924 1.069255 GAAAACCTCTTCGTCGCTCC 58.931 55.000 0.00 0.00 0.00 4.70
2822 7925 0.680061 AAAACCTCTTCGTCGCTCCT 59.320 50.000 0.00 0.00 0.00 3.69
2823 7926 0.038159 AAACCTCTTCGTCGCTCCTG 60.038 55.000 0.00 0.00 0.00 3.86
2824 7927 2.202676 CCTCTTCGTCGCTCCTGC 60.203 66.667 0.00 0.00 0.00 4.85
2834 7937 2.802414 GCTCCTGCGCGCAAAAAG 60.802 61.111 35.50 29.03 0.00 2.27
2835 7938 2.945984 CTCCTGCGCGCAAAAAGA 59.054 55.556 35.50 25.28 0.00 2.52
2836 7939 1.441016 CTCCTGCGCGCAAAAAGAC 60.441 57.895 35.50 1.54 0.00 3.01
2837 7940 1.845809 CTCCTGCGCGCAAAAAGACT 61.846 55.000 35.50 0.00 0.00 3.24
2838 7941 0.601576 TCCTGCGCGCAAAAAGACTA 60.602 50.000 35.50 8.69 0.00 2.59
2839 7942 0.447801 CCTGCGCGCAAAAAGACTAT 59.552 50.000 35.50 0.00 0.00 2.12
2840 7943 1.135689 CCTGCGCGCAAAAAGACTATT 60.136 47.619 35.50 0.00 0.00 1.73
2841 7944 2.584791 CTGCGCGCAAAAAGACTATTT 58.415 42.857 35.50 0.00 0.00 1.40
2842 7945 2.979813 CTGCGCGCAAAAAGACTATTTT 59.020 40.909 35.50 0.00 32.89 1.82
2855 7958 8.982925 AAAAGACTATTTTGACGTCGTAAAAG 57.017 30.769 16.41 15.75 33.10 2.27
2856 7959 7.935338 AAGACTATTTTGACGTCGTAAAAGA 57.065 32.000 16.41 12.08 33.10 2.52
2857 7960 7.935338 AGACTATTTTGACGTCGTAAAAGAA 57.065 32.000 16.41 8.44 33.10 2.52
2858 7961 8.530269 AGACTATTTTGACGTCGTAAAAGAAT 57.470 30.769 16.41 4.95 33.10 2.40
2859 7962 8.985805 AGACTATTTTGACGTCGTAAAAGAATT 58.014 29.630 16.41 5.40 33.10 2.17
2864 7967 9.977762 ATTTTGACGTCGTAAAAGAATTATACC 57.022 29.630 16.41 0.00 0.00 2.73
2865 7968 6.795053 TGACGTCGTAAAAGAATTATACCG 57.205 37.500 11.62 0.00 0.00 4.02
2866 7969 5.229887 TGACGTCGTAAAAGAATTATACCGC 59.770 40.000 11.62 0.00 0.00 5.68
2867 7970 4.204978 ACGTCGTAAAAGAATTATACCGCG 59.795 41.667 0.00 0.00 0.00 6.46
2868 7971 4.440068 GTCGTAAAAGAATTATACCGCGC 58.560 43.478 0.00 0.00 0.00 6.86
2869 7972 3.490526 TCGTAAAAGAATTATACCGCGCC 59.509 43.478 0.00 0.00 0.00 6.53
2870 7973 3.659876 CGTAAAAGAATTATACCGCGCCG 60.660 47.826 0.00 0.00 0.00 6.46
2871 7974 2.228138 AAAGAATTATACCGCGCCGA 57.772 45.000 0.00 0.00 0.00 5.54
2872 7975 1.779569 AAGAATTATACCGCGCCGAG 58.220 50.000 0.00 0.00 0.00 4.63
2873 7976 0.038526 AGAATTATACCGCGCCGAGG 60.039 55.000 4.98 4.98 0.00 4.63
2874 7977 1.623973 GAATTATACCGCGCCGAGGC 61.624 60.000 6.84 3.59 37.85 4.70
2891 7994 2.664851 CGAAGCGCACCTGTTGGA 60.665 61.111 11.47 0.00 37.04 3.53
2892 7995 2.671177 CGAAGCGCACCTGTTGGAG 61.671 63.158 11.47 0.00 37.04 3.86
2893 7996 1.301716 GAAGCGCACCTGTTGGAGA 60.302 57.895 11.47 0.00 37.04 3.71
2894 7997 0.674895 GAAGCGCACCTGTTGGAGAT 60.675 55.000 11.47 0.00 37.04 2.75
2895 7998 0.957395 AAGCGCACCTGTTGGAGATG 60.957 55.000 11.47 0.00 37.04 2.90
2896 7999 3.044059 GCGCACCTGTTGGAGATGC 62.044 63.158 0.30 0.00 37.04 3.91
2897 8000 1.376424 CGCACCTGTTGGAGATGCT 60.376 57.895 0.00 0.00 32.59 3.79
2898 8001 0.957395 CGCACCTGTTGGAGATGCTT 60.957 55.000 0.00 0.00 32.59 3.91
2927 8030 5.404466 TGAATTTTTGACTTGCCCCTATG 57.596 39.130 0.00 0.00 0.00 2.23
2977 8080 3.186817 TGAAGCCGGTTATACGTTGTTTG 59.813 43.478 1.90 0.00 0.00 2.93
2978 8081 2.769893 AGCCGGTTATACGTTGTTTGT 58.230 42.857 1.90 0.00 0.00 2.83
2979 8082 3.140623 AGCCGGTTATACGTTGTTTGTT 58.859 40.909 1.90 0.00 0.00 2.83
2980 8083 3.565063 AGCCGGTTATACGTTGTTTGTTT 59.435 39.130 1.90 0.00 0.00 2.83
2981 8084 3.664947 GCCGGTTATACGTTGTTTGTTTG 59.335 43.478 1.90 0.00 0.00 2.93
2995 8098 7.954786 CGTTGTTTGTTTGTTTTTCTATGCTTT 59.045 29.630 0.00 0.00 0.00 3.51
3074 8178 7.036829 TGCATTTGGATGAGTGAAAATGTATG 58.963 34.615 8.32 0.00 40.50 2.39
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 9.987726 ACCAACCTAGAAACTACTAGTAAGTAT 57.012 33.333 3.76 0.00 37.57 2.12
8 9 9.236006 CACCAACCTAGAAACTACTAGTAAGTA 57.764 37.037 3.76 0.00 38.41 2.24
9 10 7.946776 TCACCAACCTAGAAACTACTAGTAAGT 59.053 37.037 3.76 1.99 38.41 2.24
10 11 8.345724 TCACCAACCTAGAAACTACTAGTAAG 57.654 38.462 3.76 1.38 38.41 2.34
11 12 8.890410 ATCACCAACCTAGAAACTACTAGTAA 57.110 34.615 3.76 0.00 38.41 2.24
12 13 8.111545 TGATCACCAACCTAGAAACTACTAGTA 58.888 37.037 1.89 1.89 38.41 1.82
13 14 6.952358 TGATCACCAACCTAGAAACTACTAGT 59.048 38.462 0.00 0.00 38.41 2.57
14 15 7.406031 TGATCACCAACCTAGAAACTACTAG 57.594 40.000 0.00 0.00 39.40 2.57
15 16 7.399191 ACATGATCACCAACCTAGAAACTACTA 59.601 37.037 0.00 0.00 0.00 1.82
16 17 6.213600 ACATGATCACCAACCTAGAAACTACT 59.786 38.462 0.00 0.00 0.00 2.57
17 18 6.407202 ACATGATCACCAACCTAGAAACTAC 58.593 40.000 0.00 0.00 0.00 2.73
18 19 6.620877 ACATGATCACCAACCTAGAAACTA 57.379 37.500 0.00 0.00 0.00 2.24
19 20 5.505181 ACATGATCACCAACCTAGAAACT 57.495 39.130 0.00 0.00 0.00 2.66
20 21 6.206634 TGAAACATGATCACCAACCTAGAAAC 59.793 38.462 0.00 0.00 0.00 2.78
21 22 6.303054 TGAAACATGATCACCAACCTAGAAA 58.697 36.000 0.00 0.00 0.00 2.52
22 23 5.875224 TGAAACATGATCACCAACCTAGAA 58.125 37.500 0.00 0.00 0.00 2.10
23 24 5.497464 TGAAACATGATCACCAACCTAGA 57.503 39.130 0.00 0.00 0.00 2.43
24 25 6.151648 ACATTGAAACATGATCACCAACCTAG 59.848 38.462 0.00 0.00 0.00 3.02
25 26 6.009589 ACATTGAAACATGATCACCAACCTA 58.990 36.000 0.00 0.00 0.00 3.08
26 27 4.834496 ACATTGAAACATGATCACCAACCT 59.166 37.500 0.00 0.00 0.00 3.50
27 28 5.138125 ACATTGAAACATGATCACCAACC 57.862 39.130 0.00 0.00 0.00 3.77
28 29 8.028354 TGATAACATTGAAACATGATCACCAAC 58.972 33.333 0.00 0.00 0.00 3.77
29 30 8.120140 TGATAACATTGAAACATGATCACCAA 57.880 30.769 0.00 0.00 0.00 3.67
30 31 7.629008 GCTGATAACATTGAAACATGATCACCA 60.629 37.037 0.00 0.00 0.00 4.17
31 32 6.694411 GCTGATAACATTGAAACATGATCACC 59.306 38.462 0.00 0.00 0.00 4.02
32 33 7.478322 AGCTGATAACATTGAAACATGATCAC 58.522 34.615 0.00 0.00 0.00 3.06
33 34 7.634671 AGCTGATAACATTGAAACATGATCA 57.365 32.000 0.00 0.00 0.00 2.92
34 35 8.922058 AAAGCTGATAACATTGAAACATGATC 57.078 30.769 0.00 0.00 0.00 2.92
35 36 9.715121 AAAAAGCTGATAACATTGAAACATGAT 57.285 25.926 0.00 0.00 0.00 2.45
36 37 8.980610 CAAAAAGCTGATAACATTGAAACATGA 58.019 29.630 0.00 0.00 0.00 3.07
37 38 8.980610 TCAAAAAGCTGATAACATTGAAACATG 58.019 29.630 0.00 0.00 0.00 3.21
38 39 9.715121 ATCAAAAAGCTGATAACATTGAAACAT 57.285 25.926 0.00 0.00 34.20 2.71
43 44 9.304731 GCATTATCAAAAAGCTGATAACATTGA 57.695 29.630 7.95 2.97 46.10 2.57
44 45 9.309516 AGCATTATCAAAAAGCTGATAACATTG 57.690 29.630 7.95 5.25 46.10 2.82
45 46 9.525409 GAGCATTATCAAAAAGCTGATAACATT 57.475 29.630 7.95 0.00 46.10 2.71
46 47 8.139989 GGAGCATTATCAAAAAGCTGATAACAT 58.860 33.333 7.95 0.00 46.10 2.71
47 48 7.122501 TGGAGCATTATCAAAAAGCTGATAACA 59.877 33.333 7.95 0.89 46.10 2.41
48 49 7.483307 TGGAGCATTATCAAAAAGCTGATAAC 58.517 34.615 7.95 0.00 46.10 1.89
49 50 7.643569 TGGAGCATTATCAAAAAGCTGATAA 57.356 32.000 8.16 8.16 46.87 1.75
52 53 5.477984 AGTTGGAGCATTATCAAAAAGCTGA 59.522 36.000 0.00 0.00 35.36 4.26
59 60 5.477984 AGAAGCAAGTTGGAGCATTATCAAA 59.522 36.000 4.75 0.00 0.00 2.69
60 61 5.012239 AGAAGCAAGTTGGAGCATTATCAA 58.988 37.500 4.75 0.00 0.00 2.57
61 62 4.592942 AGAAGCAAGTTGGAGCATTATCA 58.407 39.130 4.75 0.00 0.00 2.15
115 116 5.239963 CCGGTTTCCAGTTTACAACTAACAT 59.760 40.000 0.00 0.00 40.46 2.71
129 131 3.435671 GTCAAGAATACACCGGTTTCCAG 59.564 47.826 2.97 2.37 0.00 3.86
137 139 4.988540 TCAACAAGAGTCAAGAATACACCG 59.011 41.667 0.00 0.00 0.00 4.94
150 152 8.579850 TTTCCATTAATATGCTCAACAAGAGT 57.420 30.769 0.00 0.00 46.47 3.24
152 154 7.068593 CCCTTTCCATTAATATGCTCAACAAGA 59.931 37.037 0.00 0.00 0.00 3.02
153 155 7.205297 CCCTTTCCATTAATATGCTCAACAAG 58.795 38.462 0.00 0.00 0.00 3.16
154 156 6.098124 CCCCTTTCCATTAATATGCTCAACAA 59.902 38.462 0.00 0.00 0.00 2.83
155 157 5.598005 CCCCTTTCCATTAATATGCTCAACA 59.402 40.000 0.00 0.00 0.00 3.33
156 158 5.598417 ACCCCTTTCCATTAATATGCTCAAC 59.402 40.000 0.00 0.00 0.00 3.18
157 159 5.598005 CACCCCTTTCCATTAATATGCTCAA 59.402 40.000 0.00 0.00 0.00 3.02
158 160 5.139727 CACCCCTTTCCATTAATATGCTCA 58.860 41.667 0.00 0.00 0.00 4.26
159 161 4.021981 GCACCCCTTTCCATTAATATGCTC 60.022 45.833 0.00 0.00 0.00 4.26
160 162 3.897505 GCACCCCTTTCCATTAATATGCT 59.102 43.478 0.00 0.00 0.00 3.79
161 163 3.006859 GGCACCCCTTTCCATTAATATGC 59.993 47.826 0.00 0.00 0.00 3.14
162 164 4.222336 TGGCACCCCTTTCCATTAATATG 58.778 43.478 0.00 0.00 0.00 1.78
163 165 4.482990 CTGGCACCCCTTTCCATTAATAT 58.517 43.478 0.00 0.00 0.00 1.28
164 166 3.909732 CTGGCACCCCTTTCCATTAATA 58.090 45.455 0.00 0.00 0.00 0.98
171 173 0.251608 TTAAGCTGGCACCCCTTTCC 60.252 55.000 0.00 0.00 0.00 3.13
180 182 5.823570 TGTTAGTTACTGTTTTAAGCTGGCA 59.176 36.000 0.00 0.00 0.00 4.92
181 183 6.308371 TGTTAGTTACTGTTTTAAGCTGGC 57.692 37.500 0.00 0.00 0.00 4.85
182 184 9.744468 AAAATGTTAGTTACTGTTTTAAGCTGG 57.256 29.630 0.00 0.00 0.00 4.85
286 1846 4.928615 TCACCAATTTGGAAAAATGATCGC 59.071 37.500 22.19 0.00 40.96 4.58
403 1965 7.915397 GCAGCCGAAATTTTATTTCAGAGATTA 59.085 33.333 11.43 0.00 0.00 1.75
409 1971 4.496895 CGAGCAGCCGAAATTTTATTTCAG 59.503 41.667 11.43 2.89 0.00 3.02
420 1982 0.179111 CTCCATACGAGCAGCCGAAA 60.179 55.000 9.87 0.00 0.00 3.46
431 1993 1.452025 CGTAAGAATGCGCTCCATACG 59.548 52.381 9.73 12.64 43.02 3.06
465 2027 2.747822 GCTCAGTGCATGCGTCCAG 61.748 63.158 14.09 7.64 42.31 3.86
472 2034 1.808343 TGTAGCAAAGCTCAGTGCATG 59.192 47.619 16.58 0.00 45.94 4.06
474 2036 1.229428 GTGTAGCAAAGCTCAGTGCA 58.771 50.000 16.58 0.00 45.94 4.57
480 2042 2.365408 ACGTAGGTGTAGCAAAGCTC 57.635 50.000 0.00 0.00 40.44 4.09
481 2043 2.559668 TGTACGTAGGTGTAGCAAAGCT 59.440 45.455 0.00 0.00 43.41 3.74
482 2044 2.665052 GTGTACGTAGGTGTAGCAAAGC 59.335 50.000 0.00 0.00 0.00 3.51
483 2045 3.904571 TGTGTACGTAGGTGTAGCAAAG 58.095 45.455 0.00 0.00 0.00 2.77
484 2046 4.524316 ATGTGTACGTAGGTGTAGCAAA 57.476 40.909 0.00 0.00 0.00 3.68
485 2047 4.524316 AATGTGTACGTAGGTGTAGCAA 57.476 40.909 0.00 0.00 0.00 3.91
486 2048 5.840243 ATAATGTGTACGTAGGTGTAGCA 57.160 39.130 0.00 0.00 0.00 3.49
487 2049 7.195646 TGTAATAATGTGTACGTAGGTGTAGC 58.804 38.462 0.00 0.00 0.00 3.58
490 2052 9.520204 GTTATGTAATAATGTGTACGTAGGTGT 57.480 33.333 0.00 0.00 41.51 4.16
491 2053 9.740239 AGTTATGTAATAATGTGTACGTAGGTG 57.260 33.333 0.00 0.00 41.51 4.00
507 2069 8.142551 GGTCATCCTCTTCGTAAGTTATGTAAT 58.857 37.037 2.08 0.00 39.48 1.89
508 2070 7.341256 AGGTCATCCTCTTCGTAAGTTATGTAA 59.659 37.037 2.08 0.00 40.58 2.41
509 2071 6.832384 AGGTCATCCTCTTCGTAAGTTATGTA 59.168 38.462 2.08 0.00 40.58 2.29
510 2072 5.657302 AGGTCATCCTCTTCGTAAGTTATGT 59.343 40.000 2.08 0.00 40.58 2.29
511 2073 5.980116 CAGGTCATCCTCTTCGTAAGTTATG 59.020 44.000 0.00 0.00 43.07 1.90
512 2074 5.069251 CCAGGTCATCCTCTTCGTAAGTTAT 59.931 44.000 0.00 0.00 43.07 1.89
513 2075 4.401519 CCAGGTCATCCTCTTCGTAAGTTA 59.598 45.833 0.00 0.00 43.07 2.24
514 2076 3.195825 CCAGGTCATCCTCTTCGTAAGTT 59.804 47.826 0.00 0.00 43.07 2.66
515 2077 2.761208 CCAGGTCATCCTCTTCGTAAGT 59.239 50.000 0.00 0.00 43.07 2.24
516 2078 2.482142 GCCAGGTCATCCTCTTCGTAAG 60.482 54.545 0.00 0.00 43.07 2.34
517 2079 1.480954 GCCAGGTCATCCTCTTCGTAA 59.519 52.381 0.00 0.00 43.07 3.18
518 2080 1.112113 GCCAGGTCATCCTCTTCGTA 58.888 55.000 0.00 0.00 43.07 3.43
519 2081 1.617947 GGCCAGGTCATCCTCTTCGT 61.618 60.000 0.00 0.00 43.07 3.85
520 2082 1.144936 GGCCAGGTCATCCTCTTCG 59.855 63.158 0.00 0.00 43.07 3.79
521 2083 0.179936 CAGGCCAGGTCATCCTCTTC 59.820 60.000 5.01 0.00 43.07 2.87
522 2084 0.548682 ACAGGCCAGGTCATCCTCTT 60.549 55.000 5.01 0.00 43.07 2.85
523 2085 0.548682 AACAGGCCAGGTCATCCTCT 60.549 55.000 5.01 0.00 43.07 3.69
524 2086 0.329596 AAACAGGCCAGGTCATCCTC 59.670 55.000 5.01 0.00 43.07 3.71
525 2087 0.779997 AAAACAGGCCAGGTCATCCT 59.220 50.000 5.01 0.00 46.37 3.24
526 2088 0.890683 CAAAACAGGCCAGGTCATCC 59.109 55.000 5.01 0.00 0.00 3.51
527 2089 0.890683 CCAAAACAGGCCAGGTCATC 59.109 55.000 5.01 0.00 0.00 2.92
528 2090 0.188342 ACCAAAACAGGCCAGGTCAT 59.812 50.000 5.01 0.00 0.00 3.06
529 2091 0.032615 AACCAAAACAGGCCAGGTCA 60.033 50.000 5.01 0.00 0.00 4.02
530 2092 0.389025 CAACCAAAACAGGCCAGGTC 59.611 55.000 5.01 0.00 0.00 3.85
531 2093 1.048160 CCAACCAAAACAGGCCAGGT 61.048 55.000 5.01 0.00 0.00 4.00
532 2094 0.758685 TCCAACCAAAACAGGCCAGG 60.759 55.000 5.01 0.00 0.00 4.45
533 2095 1.069049 CTTCCAACCAAAACAGGCCAG 59.931 52.381 5.01 0.00 0.00 4.85
534 2096 1.118838 CTTCCAACCAAAACAGGCCA 58.881 50.000 5.01 0.00 0.00 5.36
535 2097 1.119684 ACTTCCAACCAAAACAGGCC 58.880 50.000 0.00 0.00 0.00 5.19
536 2098 2.979814 AACTTCCAACCAAAACAGGC 57.020 45.000 0.00 0.00 0.00 4.85
537 2099 5.845391 TCTTAACTTCCAACCAAAACAGG 57.155 39.130 0.00 0.00 0.00 4.00
538 2100 6.273071 CCTTCTTAACTTCCAACCAAAACAG 58.727 40.000 0.00 0.00 0.00 3.16
539 2101 5.394773 GCCTTCTTAACTTCCAACCAAAACA 60.395 40.000 0.00 0.00 0.00 2.83
540 2102 5.047847 GCCTTCTTAACTTCCAACCAAAAC 58.952 41.667 0.00 0.00 0.00 2.43
541 2103 4.100344 GGCCTTCTTAACTTCCAACCAAAA 59.900 41.667 0.00 0.00 0.00 2.44
542 2104 3.639561 GGCCTTCTTAACTTCCAACCAAA 59.360 43.478 0.00 0.00 0.00 3.28
543 2105 3.227614 GGCCTTCTTAACTTCCAACCAA 58.772 45.455 0.00 0.00 0.00 3.67
544 2106 2.490168 GGGCCTTCTTAACTTCCAACCA 60.490 50.000 0.84 0.00 0.00 3.67
545 2107 2.168496 GGGCCTTCTTAACTTCCAACC 58.832 52.381 0.84 0.00 0.00 3.77
546 2108 2.820197 CTGGGCCTTCTTAACTTCCAAC 59.180 50.000 4.53 0.00 0.00 3.77
547 2109 2.225017 CCTGGGCCTTCTTAACTTCCAA 60.225 50.000 4.53 0.00 0.00 3.53
548 2110 1.354368 CCTGGGCCTTCTTAACTTCCA 59.646 52.381 4.53 0.00 0.00 3.53
549 2111 1.955683 GCCTGGGCCTTCTTAACTTCC 60.956 57.143 4.53 0.00 34.56 3.46
550 2112 1.464734 GCCTGGGCCTTCTTAACTTC 58.535 55.000 4.53 0.00 34.56 3.01
551 2113 3.672066 GCCTGGGCCTTCTTAACTT 57.328 52.632 4.53 0.00 34.56 2.66
565 2127 3.801068 TTTTCACGGGGTGGGCCTG 62.801 63.158 4.53 0.00 33.87 4.85
566 2128 2.781431 GATTTTCACGGGGTGGGCCT 62.781 60.000 4.53 0.00 33.87 5.19
567 2129 2.283604 ATTTTCACGGGGTGGGCC 60.284 61.111 0.00 0.00 33.87 5.80
568 2130 1.595093 CTGATTTTCACGGGGTGGGC 61.595 60.000 0.00 0.00 33.87 5.36
569 2131 0.965363 CCTGATTTTCACGGGGTGGG 60.965 60.000 0.00 0.00 33.87 4.61
570 2132 0.965363 CCCTGATTTTCACGGGGTGG 60.965 60.000 0.00 0.00 45.91 4.61
571 2133 2.566824 CCCTGATTTTCACGGGGTG 58.433 57.895 0.00 0.00 45.91 4.61
574 2136 4.337013 CCCCCTGATTTTCACGGG 57.663 61.111 4.99 4.99 40.88 5.28
588 2150 1.103398 CAACCAATCATCGCTCCCCC 61.103 60.000 0.00 0.00 0.00 5.40
589 2151 0.107214 TCAACCAATCATCGCTCCCC 60.107 55.000 0.00 0.00 0.00 4.81
590 2152 1.303309 CTCAACCAATCATCGCTCCC 58.697 55.000 0.00 0.00 0.00 4.30
591 2153 1.303309 CCTCAACCAATCATCGCTCC 58.697 55.000 0.00 0.00 0.00 4.70
592 2154 0.659957 GCCTCAACCAATCATCGCTC 59.340 55.000 0.00 0.00 0.00 5.03
593 2155 0.035152 TGCCTCAACCAATCATCGCT 60.035 50.000 0.00 0.00 0.00 4.93
594 2156 0.379669 CTGCCTCAACCAATCATCGC 59.620 55.000 0.00 0.00 0.00 4.58
595 2157 1.019673 CCTGCCTCAACCAATCATCG 58.980 55.000 0.00 0.00 0.00 3.84
596 2158 2.019984 GACCTGCCTCAACCAATCATC 58.980 52.381 0.00 0.00 0.00 2.92
597 2159 1.355381 TGACCTGCCTCAACCAATCAT 59.645 47.619 0.00 0.00 0.00 2.45
598 2160 0.770499 TGACCTGCCTCAACCAATCA 59.230 50.000 0.00 0.00 0.00 2.57
599 2161 1.003580 TCTGACCTGCCTCAACCAATC 59.996 52.381 0.00 0.00 0.00 2.67
600 2162 1.067295 TCTGACCTGCCTCAACCAAT 58.933 50.000 0.00 0.00 0.00 3.16
601 2163 0.843309 TTCTGACCTGCCTCAACCAA 59.157 50.000 0.00 0.00 0.00 3.67
602 2164 0.108585 GTTCTGACCTGCCTCAACCA 59.891 55.000 0.00 0.00 0.00 3.67
603 2165 0.951040 CGTTCTGACCTGCCTCAACC 60.951 60.000 0.00 0.00 0.00 3.77
604 2166 0.249911 ACGTTCTGACCTGCCTCAAC 60.250 55.000 0.00 0.00 0.00 3.18
605 2167 1.334160 TACGTTCTGACCTGCCTCAA 58.666 50.000 0.00 0.00 0.00 3.02
606 2168 1.000506 GTTACGTTCTGACCTGCCTCA 59.999 52.381 0.00 0.00 0.00 3.86
607 2169 1.272769 AGTTACGTTCTGACCTGCCTC 59.727 52.381 0.00 0.00 0.00 4.70
608 2170 1.339097 AGTTACGTTCTGACCTGCCT 58.661 50.000 0.00 0.00 0.00 4.75
609 2171 2.165319 AAGTTACGTTCTGACCTGCC 57.835 50.000 0.00 0.00 0.00 4.85
610 2172 4.642424 GTAAAGTTACGTTCTGACCTGC 57.358 45.455 0.00 0.00 0.00 4.85
622 2184 8.678199 AGACCTACATAAGTACCGTAAAGTTAC 58.322 37.037 0.00 0.00 0.00 2.50
623 2185 8.807948 AGACCTACATAAGTACCGTAAAGTTA 57.192 34.615 0.00 0.00 0.00 2.24
624 2186 7.709149 AGACCTACATAAGTACCGTAAAGTT 57.291 36.000 0.00 0.00 0.00 2.66
625 2187 7.012799 GCTAGACCTACATAAGTACCGTAAAGT 59.987 40.741 0.00 0.00 0.00 2.66
626 2188 7.012704 TGCTAGACCTACATAAGTACCGTAAAG 59.987 40.741 0.00 0.00 0.00 1.85
627 2189 6.828273 TGCTAGACCTACATAAGTACCGTAAA 59.172 38.462 0.00 0.00 0.00 2.01
628 2190 6.356556 TGCTAGACCTACATAAGTACCGTAA 58.643 40.000 0.00 0.00 0.00 3.18
629 2191 5.928976 TGCTAGACCTACATAAGTACCGTA 58.071 41.667 0.00 0.00 0.00 4.02
630 2192 4.785301 TGCTAGACCTACATAAGTACCGT 58.215 43.478 0.00 0.00 0.00 4.83
631 2193 5.961396 ATGCTAGACCTACATAAGTACCG 57.039 43.478 0.00 0.00 0.00 4.02
632 2194 8.827677 CAAAAATGCTAGACCTACATAAGTACC 58.172 37.037 0.00 0.00 0.00 3.34
633 2195 8.827677 CCAAAAATGCTAGACCTACATAAGTAC 58.172 37.037 0.00 0.00 0.00 2.73
634 2196 8.545472 ACCAAAAATGCTAGACCTACATAAGTA 58.455 33.333 0.00 0.00 0.00 2.24
635 2197 7.336931 CACCAAAAATGCTAGACCTACATAAGT 59.663 37.037 0.00 0.00 0.00 2.24
636 2198 7.679638 GCACCAAAAATGCTAGACCTACATAAG 60.680 40.741 0.00 0.00 40.08 1.73
637 2199 6.094881 GCACCAAAAATGCTAGACCTACATAA 59.905 38.462 0.00 0.00 40.08 1.90
638 2200 5.588648 GCACCAAAAATGCTAGACCTACATA 59.411 40.000 0.00 0.00 40.08 2.29
639 2201 4.399303 GCACCAAAAATGCTAGACCTACAT 59.601 41.667 0.00 0.00 40.08 2.29
640 2202 3.756434 GCACCAAAAATGCTAGACCTACA 59.244 43.478 0.00 0.00 40.08 2.74
641 2203 4.357018 GCACCAAAAATGCTAGACCTAC 57.643 45.455 0.00 0.00 40.08 3.18
650 2212 1.284297 GCACGGAGCACCAAAAATGC 61.284 55.000 0.00 0.00 44.79 3.56
651 2213 2.813100 GCACGGAGCACCAAAAATG 58.187 52.632 0.00 0.00 44.79 2.32
674 2236 5.189736 TCCTTGCCGGCATATATTCTTCTAT 59.810 40.000 33.25 0.00 0.00 1.98
686 2248 2.033448 TCGTTTCCTTGCCGGCAT 59.967 55.556 33.25 0.00 0.00 4.40
687 2249 2.668212 CTCGTTTCCTTGCCGGCA 60.668 61.111 29.03 29.03 0.00 5.69
688 2250 4.103103 GCTCGTTTCCTTGCCGGC 62.103 66.667 22.73 22.73 0.00 6.13
691 2253 0.949105 TTCGAGCTCGTTTCCTTGCC 60.949 55.000 33.33 0.00 40.80 4.52
717 2299 9.662947 GGTTCCTACTATGTACTGTACAAATTT 57.337 33.333 23.03 10.36 42.76 1.82
719 2301 8.370266 TGGTTCCTACTATGTACTGTACAAAT 57.630 34.615 23.03 14.03 42.76 2.32
720 2302 7.670979 TCTGGTTCCTACTATGTACTGTACAAA 59.329 37.037 23.03 9.37 42.76 2.83
721 2303 7.121759 GTCTGGTTCCTACTATGTACTGTACAA 59.878 40.741 23.03 12.18 42.76 2.41
723 2305 6.039159 GGTCTGGTTCCTACTATGTACTGTAC 59.961 46.154 10.98 10.98 0.00 2.90
724 2306 6.125029 GGTCTGGTTCCTACTATGTACTGTA 58.875 44.000 0.00 0.00 0.00 2.74
725 2307 4.954826 GGTCTGGTTCCTACTATGTACTGT 59.045 45.833 0.00 0.00 0.00 3.55
726 2308 4.954202 TGGTCTGGTTCCTACTATGTACTG 59.046 45.833 0.00 0.00 0.00 2.74
788 2375 4.323843 ACGACTCGTCTGCGCGTT 62.324 61.111 8.43 0.00 36.09 4.84
834 2436 2.257371 CGGCGTGGAAGTCTTCGA 59.743 61.111 6.50 0.00 0.00 3.71
871 2473 2.886730 ATTGGATGGGAACGACCGGC 62.887 60.000 0.00 0.00 40.11 6.13
873 2475 0.392461 ACATTGGATGGGAACGACCG 60.392 55.000 0.00 0.00 40.11 4.79
874 2476 1.094785 CACATTGGATGGGAACGACC 58.905 55.000 0.00 0.00 35.01 4.79
875 2477 0.451783 GCACATTGGATGGGAACGAC 59.548 55.000 0.00 0.00 35.01 4.34
876 2478 1.024046 CGCACATTGGATGGGAACGA 61.024 55.000 0.00 0.00 35.01 3.85
877 2479 1.305219 ACGCACATTGGATGGGAACG 61.305 55.000 0.00 0.00 35.01 3.95
878 2480 0.171007 CACGCACATTGGATGGGAAC 59.829 55.000 0.00 0.00 35.01 3.62
925 2529 1.340991 ACGGAGGGTGCTTTTATGCAT 60.341 47.619 3.79 3.79 45.23 3.96
954 2562 2.126734 GCGCTGTGTGGATGCAAC 60.127 61.111 0.00 0.00 0.00 4.17
958 2566 3.190849 CGGAGCGCTGTGTGGATG 61.191 66.667 18.48 0.00 0.00 3.51
971 2579 0.605589 GATGGGGTATGAGAGCGGAG 59.394 60.000 0.00 0.00 0.00 4.63
972 2580 0.105709 TGATGGGGTATGAGAGCGGA 60.106 55.000 0.00 0.00 0.00 5.54
973 2581 0.034059 GTGATGGGGTATGAGAGCGG 59.966 60.000 0.00 0.00 0.00 5.52
974 2582 0.319040 CGTGATGGGGTATGAGAGCG 60.319 60.000 0.00 0.00 0.00 5.03
975 2583 1.040646 TCGTGATGGGGTATGAGAGC 58.959 55.000 0.00 0.00 0.00 4.09
976 2584 2.031870 TGTCGTGATGGGGTATGAGAG 58.968 52.381 0.00 0.00 0.00 3.20
977 2585 2.153034 TGTCGTGATGGGGTATGAGA 57.847 50.000 0.00 0.00 0.00 3.27
978 2586 3.181466 TGAATGTCGTGATGGGGTATGAG 60.181 47.826 0.00 0.00 0.00 2.90
979 2587 2.769095 TGAATGTCGTGATGGGGTATGA 59.231 45.455 0.00 0.00 0.00 2.15
1003 2641 2.163818 TGGGTTGTGACTTGATCGAC 57.836 50.000 0.00 0.00 0.00 4.20
1018 2656 2.751436 GCACGGTGCATCATGGGT 60.751 61.111 27.10 0.00 44.26 4.51
1087 6151 2.968206 GGGTAGTCGAACGGCTGT 59.032 61.111 11.57 0.00 0.00 4.40
1324 6410 4.152625 GCGCCGCTGTTGCAGTAG 62.153 66.667 0.00 0.00 39.64 2.57
1699 6786 0.797249 CGTTCAGTCCATCGTCGTCC 60.797 60.000 0.00 0.00 0.00 4.79
1980 7073 1.211212 TGGTGCTCAGGATTCATCAGG 59.789 52.381 0.00 0.00 0.00 3.86
2014 7107 4.377762 AGCCATATGCCTTGATGTATGT 57.622 40.909 0.00 0.00 42.71 2.29
2015 7108 5.884232 ACATAGCCATATGCCTTGATGTATG 59.116 40.000 1.24 0.00 42.26 2.39
2016 7109 6.070951 ACATAGCCATATGCCTTGATGTAT 57.929 37.500 1.24 0.00 42.26 2.29
2017 7110 5.491070 GACATAGCCATATGCCTTGATGTA 58.509 41.667 2.85 0.00 42.26 2.29
2018 7111 4.330250 GACATAGCCATATGCCTTGATGT 58.670 43.478 2.54 2.54 42.26 3.06
2019 7112 3.693085 GGACATAGCCATATGCCTTGATG 59.307 47.826 0.00 0.00 42.26 3.07
2020 7113 3.590630 AGGACATAGCCATATGCCTTGAT 59.409 43.478 0.00 0.00 42.26 2.57
2021 7114 2.981784 AGGACATAGCCATATGCCTTGA 59.018 45.455 0.00 0.00 42.26 3.02
2104 7197 6.422776 ACGGACACAAGATTTATGTCATTC 57.577 37.500 6.00 0.00 43.73 2.67
2106 7199 6.173339 AGAACGGACACAAGATTTATGTCAT 58.827 36.000 6.00 0.00 43.73 3.06
2159 7252 4.835284 TGGCACAAGATAAGTCACCATA 57.165 40.909 0.00 0.00 31.92 2.74
2314 7412 3.128068 TGTGTGCACTAGTACCAGATACG 59.872 47.826 19.41 0.00 38.97 3.06
2427 7527 7.581011 ACAACACAAATCTTGACAAAAGAAC 57.419 32.000 0.00 0.00 0.00 3.01
2458 7560 8.527810 TCAAAAATCAACCTAAGAAACACAAGT 58.472 29.630 0.00 0.00 0.00 3.16
2467 7569 6.264518 GGGACAAGTCAAAAATCAACCTAAGA 59.735 38.462 2.29 0.00 0.00 2.10
2595 7698 1.604755 TGATTTTTAGCGCGTGTGGTT 59.395 42.857 8.43 0.00 0.00 3.67
2596 7699 1.231221 TGATTTTTAGCGCGTGTGGT 58.769 45.000 8.43 0.00 0.00 4.16
2599 7702 3.552604 ACAATGATTTTTAGCGCGTGT 57.447 38.095 8.43 0.00 0.00 4.49
2600 7703 4.884257 AAACAATGATTTTTAGCGCGTG 57.116 36.364 8.43 0.00 0.00 5.34
2605 7708 7.017055 GGTGCATGAAAACAATGATTTTTAGC 58.983 34.615 0.00 0.00 31.90 3.09
2612 7715 2.824936 TCCGGTGCATGAAAACAATGAT 59.175 40.909 0.00 0.00 0.00 2.45
2613 7716 2.228582 CTCCGGTGCATGAAAACAATGA 59.771 45.455 0.00 0.00 0.00 2.57
2614 7717 2.228582 TCTCCGGTGCATGAAAACAATG 59.771 45.455 0.00 0.00 0.00 2.82
2615 7718 2.228822 GTCTCCGGTGCATGAAAACAAT 59.771 45.455 0.00 0.00 0.00 2.71
2616 7719 1.606668 GTCTCCGGTGCATGAAAACAA 59.393 47.619 0.00 0.00 0.00 2.83
2617 7720 1.234821 GTCTCCGGTGCATGAAAACA 58.765 50.000 0.00 0.00 0.00 2.83
2618 7721 1.234821 TGTCTCCGGTGCATGAAAAC 58.765 50.000 0.00 0.00 0.00 2.43
2619 7722 1.974265 TTGTCTCCGGTGCATGAAAA 58.026 45.000 0.00 0.00 0.00 2.29
2620 7723 1.974265 TTTGTCTCCGGTGCATGAAA 58.026 45.000 0.00 0.00 0.00 2.69
2621 7724 1.974265 TTTTGTCTCCGGTGCATGAA 58.026 45.000 0.00 0.00 0.00 2.57
2622 7725 1.974265 TTTTTGTCTCCGGTGCATGA 58.026 45.000 0.00 0.00 0.00 3.07
2638 7741 2.904866 TGCCGGAGCGCTGTTTTT 60.905 55.556 18.48 0.00 44.31 1.94
2639 7742 3.357079 CTGCCGGAGCGCTGTTTT 61.357 61.111 18.48 0.00 44.31 2.43
2640 7743 4.314440 TCTGCCGGAGCGCTGTTT 62.314 61.111 18.48 0.00 44.31 2.83
2651 7754 2.858344 CTCTATTTTACACCGTCTGCCG 59.142 50.000 0.00 0.00 0.00 5.69
2652 7755 2.608090 GCTCTATTTTACACCGTCTGCC 59.392 50.000 0.00 0.00 0.00 4.85
2653 7756 3.259064 TGCTCTATTTTACACCGTCTGC 58.741 45.455 0.00 0.00 0.00 4.26
2654 7757 4.260375 GCATGCTCTATTTTACACCGTCTG 60.260 45.833 11.37 0.00 0.00 3.51
2655 7758 3.871594 GCATGCTCTATTTTACACCGTCT 59.128 43.478 11.37 0.00 0.00 4.18
2656 7759 3.621268 TGCATGCTCTATTTTACACCGTC 59.379 43.478 20.33 0.00 0.00 4.79
2657 7760 3.374058 GTGCATGCTCTATTTTACACCGT 59.626 43.478 20.33 0.00 0.00 4.83
2658 7761 3.373748 TGTGCATGCTCTATTTTACACCG 59.626 43.478 20.33 0.00 0.00 4.94
2659 7762 4.963276 TGTGCATGCTCTATTTTACACC 57.037 40.909 20.33 0.00 0.00 4.16
2660 7763 7.636259 TTTTTGTGCATGCTCTATTTTACAC 57.364 32.000 20.33 4.86 0.00 2.90
2661 7764 8.306038 AGATTTTTGTGCATGCTCTATTTTACA 58.694 29.630 20.33 9.20 0.00 2.41
2662 7765 8.693542 AGATTTTTGTGCATGCTCTATTTTAC 57.306 30.769 20.33 6.41 0.00 2.01
2663 7766 9.709495 AAAGATTTTTGTGCATGCTCTATTTTA 57.291 25.926 20.33 0.00 0.00 1.52
2664 7767 8.611654 AAAGATTTTTGTGCATGCTCTATTTT 57.388 26.923 20.33 7.86 0.00 1.82
2665 7768 9.362539 CTAAAGATTTTTGTGCATGCTCTATTT 57.637 29.630 20.33 10.76 0.00 1.40
2666 7769 7.490402 GCTAAAGATTTTTGTGCATGCTCTATT 59.510 33.333 20.33 10.24 31.72 1.73
2667 7770 6.976925 GCTAAAGATTTTTGTGCATGCTCTAT 59.023 34.615 20.33 7.90 31.72 1.98
2668 7771 6.324819 GCTAAAGATTTTTGTGCATGCTCTA 58.675 36.000 20.33 9.67 31.72 2.43
2669 7772 5.166398 GCTAAAGATTTTTGTGCATGCTCT 58.834 37.500 20.33 8.43 31.72 4.09
2670 7773 4.030977 CGCTAAAGATTTTTGTGCATGCTC 59.969 41.667 20.33 16.39 31.72 4.26
2671 7774 3.922240 CGCTAAAGATTTTTGTGCATGCT 59.078 39.130 20.33 0.00 31.72 3.79
2672 7775 3.482436 GCGCTAAAGATTTTTGTGCATGC 60.482 43.478 11.82 11.82 34.23 4.06
2673 7776 3.674281 TGCGCTAAAGATTTTTGTGCATG 59.326 39.130 9.73 0.00 36.67 4.06
2674 7777 3.674753 GTGCGCTAAAGATTTTTGTGCAT 59.325 39.130 20.59 0.00 39.98 3.96
2675 7778 3.049206 GTGCGCTAAAGATTTTTGTGCA 58.951 40.909 9.73 16.16 37.90 4.57
2676 7779 2.088969 CGTGCGCTAAAGATTTTTGTGC 59.911 45.455 9.73 12.33 34.43 4.57
2677 7780 2.656422 CCGTGCGCTAAAGATTTTTGTG 59.344 45.455 9.73 0.00 0.00 3.33
2678 7781 2.351350 CCCGTGCGCTAAAGATTTTTGT 60.351 45.455 9.73 0.00 0.00 2.83
2679 7782 2.250188 CCCGTGCGCTAAAGATTTTTG 58.750 47.619 9.73 0.00 0.00 2.44
2680 7783 1.883926 ACCCGTGCGCTAAAGATTTTT 59.116 42.857 9.73 0.00 0.00 1.94
2681 7784 1.199097 CACCCGTGCGCTAAAGATTTT 59.801 47.619 9.73 0.00 0.00 1.82
2682 7785 0.802494 CACCCGTGCGCTAAAGATTT 59.198 50.000 9.73 0.00 0.00 2.17
2683 7786 0.321298 ACACCCGTGCGCTAAAGATT 60.321 50.000 9.73 0.00 0.00 2.40
2684 7787 1.019278 CACACCCGTGCGCTAAAGAT 61.019 55.000 9.73 0.00 36.06 2.40
2685 7788 1.666553 CACACCCGTGCGCTAAAGA 60.667 57.895 9.73 0.00 36.06 2.52
2686 7789 2.860293 CACACCCGTGCGCTAAAG 59.140 61.111 9.73 0.00 36.06 1.85
2713 7816 0.609957 CCCAAATCTGCAGTCCAGCA 60.610 55.000 14.67 0.00 41.50 4.41
2714 7817 1.941999 GCCCAAATCTGCAGTCCAGC 61.942 60.000 14.67 7.01 41.50 4.85
2715 7818 1.318158 GGCCCAAATCTGCAGTCCAG 61.318 60.000 14.67 2.90 43.17 3.86
2716 7819 1.304381 GGCCCAAATCTGCAGTCCA 60.304 57.895 14.67 0.00 0.00 4.02
2717 7820 2.409870 CGGCCCAAATCTGCAGTCC 61.410 63.158 14.67 4.16 0.00 3.85
2718 7821 3.056313 GCGGCCCAAATCTGCAGTC 62.056 63.158 14.67 0.00 35.94 3.51
2719 7822 3.064324 GCGGCCCAAATCTGCAGT 61.064 61.111 14.67 0.00 35.94 4.40
2720 7823 3.830192 GGCGGCCCAAATCTGCAG 61.830 66.667 8.12 7.63 37.56 4.41
2723 7826 4.794648 TCCGGCGGCCCAAATCTG 62.795 66.667 23.83 0.00 0.00 2.90
2724 7827 3.358932 AATCCGGCGGCCCAAATCT 62.359 57.895 23.83 0.00 0.00 2.40
2725 7828 2.833121 AATCCGGCGGCCCAAATC 60.833 61.111 23.83 0.00 0.00 2.17
2726 7829 3.146913 CAATCCGGCGGCCCAAAT 61.147 61.111 23.83 6.08 0.00 2.32
2727 7830 4.669809 ACAATCCGGCGGCCCAAA 62.670 61.111 23.83 3.23 0.00 3.28
2773 7876 1.826340 AAAAACCCAGCGCCCAATCC 61.826 55.000 2.29 0.00 0.00 3.01
2774 7877 0.892063 TAAAAACCCAGCGCCCAATC 59.108 50.000 2.29 0.00 0.00 2.67
2775 7878 1.206849 CATAAAAACCCAGCGCCCAAT 59.793 47.619 2.29 0.00 0.00 3.16
2776 7879 0.605589 CATAAAAACCCAGCGCCCAA 59.394 50.000 2.29 0.00 0.00 4.12
2777 7880 1.882989 GCATAAAAACCCAGCGCCCA 61.883 55.000 2.29 0.00 0.00 5.36
2778 7881 1.153647 GCATAAAAACCCAGCGCCC 60.154 57.895 2.29 0.00 0.00 6.13
2779 7882 0.175531 ATGCATAAAAACCCAGCGCC 59.824 50.000 2.29 0.00 0.00 6.53
2780 7883 2.008752 AATGCATAAAAACCCAGCGC 57.991 45.000 0.00 0.00 0.00 5.92
2781 7884 2.672381 CCAAATGCATAAAAACCCAGCG 59.328 45.455 0.00 0.00 0.00 5.18
2782 7885 3.936564 TCCAAATGCATAAAAACCCAGC 58.063 40.909 0.00 0.00 0.00 4.85
2783 7886 6.293900 GGTTTTCCAAATGCATAAAAACCCAG 60.294 38.462 27.80 5.86 46.75 4.45
2784 7887 5.532779 GGTTTTCCAAATGCATAAAAACCCA 59.467 36.000 27.80 3.51 46.75 4.51
2785 7888 6.007936 GGTTTTCCAAATGCATAAAAACCC 57.992 37.500 27.80 15.73 46.75 4.11
2787 7890 7.728847 AGAGGTTTTCCAAATGCATAAAAAC 57.271 32.000 20.36 20.36 43.73 2.43
2788 7891 7.170658 CGAAGAGGTTTTCCAAATGCATAAAAA 59.829 33.333 0.00 2.55 43.73 1.94
2789 7892 6.644592 CGAAGAGGTTTTCCAAATGCATAAAA 59.355 34.615 0.00 0.00 43.73 1.52
2790 7893 6.155827 CGAAGAGGTTTTCCAAATGCATAAA 58.844 36.000 0.00 0.00 43.73 1.40
2791 7894 5.242838 ACGAAGAGGTTTTCCAAATGCATAA 59.757 36.000 0.00 0.00 43.73 1.90
2792 7895 4.764823 ACGAAGAGGTTTTCCAAATGCATA 59.235 37.500 0.00 0.00 43.73 3.14
2793 7896 3.573967 ACGAAGAGGTTTTCCAAATGCAT 59.426 39.130 0.00 0.00 43.73 3.96
2794 7897 2.955660 ACGAAGAGGTTTTCCAAATGCA 59.044 40.909 0.00 0.00 43.73 3.96
2795 7898 3.565516 GACGAAGAGGTTTTCCAAATGC 58.434 45.455 0.00 0.00 43.73 3.56
2796 7899 3.810373 CGACGAAGAGGTTTTCCAAATG 58.190 45.455 0.00 0.00 43.73 2.32
2797 7900 2.225727 GCGACGAAGAGGTTTTCCAAAT 59.774 45.455 0.00 0.00 43.73 2.32
2798 7901 1.600485 GCGACGAAGAGGTTTTCCAAA 59.400 47.619 0.00 0.00 43.73 3.28
2799 7902 1.202604 AGCGACGAAGAGGTTTTCCAA 60.203 47.619 0.00 0.00 43.73 3.53
2800 7903 0.391597 AGCGACGAAGAGGTTTTCCA 59.608 50.000 0.00 0.00 43.73 3.53
2801 7904 1.069255 GAGCGACGAAGAGGTTTTCC 58.931 55.000 0.00 0.00 41.05 3.13
2802 7905 1.069255 GGAGCGACGAAGAGGTTTTC 58.931 55.000 0.00 0.00 0.00 2.29
2803 7906 0.680061 AGGAGCGACGAAGAGGTTTT 59.320 50.000 0.00 0.00 0.00 2.43
2804 7907 0.038159 CAGGAGCGACGAAGAGGTTT 60.038 55.000 0.00 0.00 0.00 3.27
2805 7908 1.587054 CAGGAGCGACGAAGAGGTT 59.413 57.895 0.00 0.00 0.00 3.50
2806 7909 2.995872 GCAGGAGCGACGAAGAGGT 61.996 63.158 0.00 0.00 0.00 3.85
2807 7910 2.202676 GCAGGAGCGACGAAGAGG 60.203 66.667 0.00 0.00 0.00 3.69
2817 7920 2.802414 CTTTTTGCGCGCAGGAGC 60.802 61.111 34.25 2.34 39.66 4.70
2818 7921 1.441016 GTCTTTTTGCGCGCAGGAG 60.441 57.895 34.25 28.76 0.00 3.69
2819 7922 0.601576 TAGTCTTTTTGCGCGCAGGA 60.602 50.000 34.25 25.05 0.00 3.86
2820 7923 0.447801 ATAGTCTTTTTGCGCGCAGG 59.552 50.000 34.25 23.31 0.00 4.85
2821 7924 2.247311 AATAGTCTTTTTGCGCGCAG 57.753 45.000 34.25 22.46 0.00 5.18
2822 7925 2.697431 AAATAGTCTTTTTGCGCGCA 57.303 40.000 33.09 33.09 0.00 6.09
2823 7926 2.977169 TCAAAATAGTCTTTTTGCGCGC 59.023 40.909 27.26 27.26 43.22 6.86
2824 7927 3.056319 CGTCAAAATAGTCTTTTTGCGCG 59.944 43.478 0.00 0.00 43.22 6.86
2825 7928 3.972502 ACGTCAAAATAGTCTTTTTGCGC 59.027 39.130 20.28 0.00 43.22 6.09
2826 7929 4.314708 CGACGTCAAAATAGTCTTTTTGCG 59.685 41.667 17.16 19.63 43.22 4.85
2827 7930 5.202640 ACGACGTCAAAATAGTCTTTTTGC 58.797 37.500 17.16 8.50 43.22 3.68
2828 7931 8.756376 TTTACGACGTCAAAATAGTCTTTTTG 57.244 30.769 17.16 11.14 44.32 2.44
2829 7932 9.429600 CTTTTACGACGTCAAAATAGTCTTTTT 57.570 29.630 17.16 0.00 33.10 1.94
2830 7933 8.819974 TCTTTTACGACGTCAAAATAGTCTTTT 58.180 29.630 17.16 0.00 33.10 2.27
2831 7934 8.356533 TCTTTTACGACGTCAAAATAGTCTTT 57.643 30.769 17.16 0.00 33.10 2.52
2832 7935 7.935338 TCTTTTACGACGTCAAAATAGTCTT 57.065 32.000 17.16 0.00 33.10 3.01
2833 7936 7.935338 TTCTTTTACGACGTCAAAATAGTCT 57.065 32.000 17.16 0.00 33.10 3.24
2838 7941 9.977762 GGTATAATTCTTTTACGACGTCAAAAT 57.022 29.630 17.16 3.71 0.00 1.82
2839 7942 8.161610 CGGTATAATTCTTTTACGACGTCAAAA 58.838 33.333 17.16 14.00 0.00 2.44
2840 7943 7.665471 CGGTATAATTCTTTTACGACGTCAAA 58.335 34.615 17.16 5.35 0.00 2.69
2841 7944 6.237542 GCGGTATAATTCTTTTACGACGTCAA 60.238 38.462 17.16 0.00 0.00 3.18
2842 7945 5.229887 GCGGTATAATTCTTTTACGACGTCA 59.770 40.000 17.16 0.00 0.00 4.35
2843 7946 5.606094 CGCGGTATAATTCTTTTACGACGTC 60.606 44.000 2.43 5.18 0.00 4.34
2844 7947 4.204978 CGCGGTATAATTCTTTTACGACGT 59.795 41.667 5.52 5.52 0.00 4.34
2845 7948 4.670952 CGCGGTATAATTCTTTTACGACG 58.329 43.478 0.00 0.00 0.00 5.12
2846 7949 4.440068 GCGCGGTATAATTCTTTTACGAC 58.560 43.478 8.83 0.00 0.00 4.34
2847 7950 3.490526 GGCGCGGTATAATTCTTTTACGA 59.509 43.478 8.83 0.00 0.00 3.43
2848 7951 3.659876 CGGCGCGGTATAATTCTTTTACG 60.660 47.826 8.83 0.00 0.00 3.18
2849 7952 3.490526 TCGGCGCGGTATAATTCTTTTAC 59.509 43.478 15.06 0.00 0.00 2.01
2850 7953 3.715495 TCGGCGCGGTATAATTCTTTTA 58.285 40.909 15.06 0.00 0.00 1.52
2851 7954 2.542595 CTCGGCGCGGTATAATTCTTTT 59.457 45.455 15.06 0.00 0.00 2.27
2852 7955 2.132762 CTCGGCGCGGTATAATTCTTT 58.867 47.619 15.06 0.00 0.00 2.52
2853 7956 1.604693 CCTCGGCGCGGTATAATTCTT 60.605 52.381 15.06 0.00 0.00 2.52
2854 7957 0.038526 CCTCGGCGCGGTATAATTCT 60.039 55.000 15.06 0.00 0.00 2.40
2855 7958 1.623973 GCCTCGGCGCGGTATAATTC 61.624 60.000 18.18 0.00 0.00 2.17
2856 7959 1.666872 GCCTCGGCGCGGTATAATT 60.667 57.895 18.18 0.00 0.00 1.40
2857 7960 2.048503 GCCTCGGCGCGGTATAAT 60.049 61.111 18.18 0.00 0.00 1.28
2874 7977 2.664851 TCCAACAGGTGCGCTTCG 60.665 61.111 9.73 0.00 0.00 3.79
2875 7978 0.674895 ATCTCCAACAGGTGCGCTTC 60.675 55.000 9.73 1.18 0.00 3.86
2876 7979 0.957395 CATCTCCAACAGGTGCGCTT 60.957 55.000 9.73 0.00 0.00 4.68
2877 7980 1.376424 CATCTCCAACAGGTGCGCT 60.376 57.895 9.73 0.00 0.00 5.92
2878 7981 3.181367 CATCTCCAACAGGTGCGC 58.819 61.111 0.00 0.00 0.00 6.09
2881 7984 3.441572 CCTAAAAGCATCTCCAACAGGTG 59.558 47.826 0.00 0.00 36.12 4.00
2882 7985 3.074538 ACCTAAAAGCATCTCCAACAGGT 59.925 43.478 0.00 0.00 0.00 4.00
2883 7986 3.690460 ACCTAAAAGCATCTCCAACAGG 58.310 45.455 0.00 0.00 0.00 4.00
2884 7987 4.761739 TCAACCTAAAAGCATCTCCAACAG 59.238 41.667 0.00 0.00 0.00 3.16
2885 7988 4.724399 TCAACCTAAAAGCATCTCCAACA 58.276 39.130 0.00 0.00 0.00 3.33
2886 7989 5.705609 TTCAACCTAAAAGCATCTCCAAC 57.294 39.130 0.00 0.00 0.00 3.77
2887 7990 6.916360 AATTCAACCTAAAAGCATCTCCAA 57.084 33.333 0.00 0.00 0.00 3.53
2888 7991 6.916360 AAATTCAACCTAAAAGCATCTCCA 57.084 33.333 0.00 0.00 0.00 3.86
2889 7992 7.872483 TCAAAAATTCAACCTAAAAGCATCTCC 59.128 33.333 0.00 0.00 0.00 3.71
2890 7993 8.703336 GTCAAAAATTCAACCTAAAAGCATCTC 58.297 33.333 0.00 0.00 0.00 2.75
2891 7994 8.424133 AGTCAAAAATTCAACCTAAAAGCATCT 58.576 29.630 0.00 0.00 0.00 2.90
2892 7995 8.593492 AGTCAAAAATTCAACCTAAAAGCATC 57.407 30.769 0.00 0.00 0.00 3.91
2893 7996 8.829612 CAAGTCAAAAATTCAACCTAAAAGCAT 58.170 29.630 0.00 0.00 0.00 3.79
2894 7997 7.201600 GCAAGTCAAAAATTCAACCTAAAAGCA 60.202 33.333 0.00 0.00 0.00 3.91
2895 7998 7.125755 GCAAGTCAAAAATTCAACCTAAAAGC 58.874 34.615 0.00 0.00 0.00 3.51
2896 7999 7.254761 GGGCAAGTCAAAAATTCAACCTAAAAG 60.255 37.037 0.00 0.00 0.00 2.27
2897 8000 6.540551 GGGCAAGTCAAAAATTCAACCTAAAA 59.459 34.615 0.00 0.00 0.00 1.52
2898 8001 6.052360 GGGCAAGTCAAAAATTCAACCTAAA 58.948 36.000 0.00 0.00 0.00 1.85
2927 8030 5.861787 CCAATCGAAAAATTGACTTACCCAC 59.138 40.000 0.00 0.00 38.64 4.61
2962 8065 8.862074 AGAAAAACAAACAAACAACGTATAACC 58.138 29.630 0.00 0.00 0.00 2.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.