Multiple sequence alignment - TraesCS3B01G561400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G561400 chr3B 100.000 3376 0 0 1 3376 794929517 794926142 0.000000e+00 6235.0
1 TraesCS3B01G561400 chr3B 90.357 280 27 0 1 280 794936117 794935838 5.320000e-98 368.0
2 TraesCS3B01G561400 chr3B 83.274 281 23 11 512 782 794933937 794933671 1.570000e-58 237.0
3 TraesCS3B01G561400 chr3B 95.050 101 5 0 277 377 794935787 794935687 3.490000e-35 159.0
4 TraesCS3B01G561400 chr3B 85.135 74 8 2 409 479 117919317 117919390 4.670000e-09 73.1
5 TraesCS3B01G561400 chr3D 92.053 1875 95 27 331 2190 592878490 592876655 0.000000e+00 2588.0
6 TraesCS3B01G561400 chr3D 85.278 720 81 15 2220 2927 592876656 592875950 0.000000e+00 719.0
7 TraesCS3B01G561400 chr3D 97.772 359 8 0 3018 3376 1941068 1941426 1.330000e-173 619.0
8 TraesCS3B01G561400 chr3D 97.214 359 10 0 3018 3376 571379097 571378739 2.880000e-170 608.0
9 TraesCS3B01G561400 chr3D 91.429 280 24 0 1 280 592879167 592878888 5.280000e-103 385.0
10 TraesCS3B01G561400 chr3D 88.517 209 22 2 1983 2190 592871070 592870863 5.590000e-63 252.0
11 TraesCS3B01G561400 chr3D 92.727 110 6 2 2220 2328 592870864 592870756 1.250000e-34 158.0
12 TraesCS3B01G561400 chr3D 94.253 87 4 1 2928 3013 592870141 592870055 7.600000e-27 132.0
13 TraesCS3B01G561400 chr3D 93.333 90 5 1 2928 3016 592875878 592875789 7.600000e-27 132.0
14 TraesCS3B01G561400 chr3D 96.552 58 2 0 277 334 592878837 592878780 2.770000e-16 97.1
15 TraesCS3B01G561400 chrUn 78.167 1255 216 40 1054 2284 45766366 45765146 0.000000e+00 747.0
16 TraesCS3B01G561400 chr4D 97.772 359 7 1 3018 3376 320277661 320277304 4.790000e-173 617.0
17 TraesCS3B01G561400 chr4D 92.063 63 5 0 419 481 13040562 13040500 4.640000e-14 89.8
18 TraesCS3B01G561400 chr1D 97.493 359 9 0 3018 3376 11499998 11499640 6.190000e-172 614.0
19 TraesCS3B01G561400 chr1D 96.936 359 11 0 3018 3376 324720438 324720080 1.340000e-168 603.0
20 TraesCS3B01G561400 chr1D 86.486 74 9 1 409 481 487763616 487763543 2.790000e-11 80.5
21 TraesCS3B01G561400 chr7D 97.214 359 10 0 3018 3376 579134554 579134912 2.880000e-170 608.0
22 TraesCS3B01G561400 chr7D 96.936 359 11 0 3018 3376 624775619 624775977 1.340000e-168 603.0
23 TraesCS3B01G561400 chr7D 100.000 28 0 0 444 471 515996415 515996442 6.000000e-03 52.8
24 TraesCS3B01G561400 chr2A 97.214 359 10 0 3018 3376 26842804 26842446 2.880000e-170 608.0
25 TraesCS3B01G561400 chr6D 96.936 359 11 0 3018 3376 52535954 52535596 1.340000e-168 603.0
26 TraesCS3B01G561400 chr6D 90.164 61 5 1 416 475 82193706 82193766 1.000000e-10 78.7
27 TraesCS3B01G561400 chr3A 75.850 294 56 13 1193 1483 724078204 724077923 5.880000e-28 135.0
28 TraesCS3B01G561400 chr4A 92.308 65 5 0 419 483 589493503 589493439 3.590000e-15 93.5
29 TraesCS3B01G561400 chr5B 89.706 68 5 2 413 478 572137815 572137882 6.000000e-13 86.1
30 TraesCS3B01G561400 chr2B 89.706 68 6 1 422 489 435515423 435515489 6.000000e-13 86.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G561400 chr3B 794926142 794929517 3375 True 6235.000000 6235 100.000000 1 3376 1 chr3B.!!$R1 3375
1 TraesCS3B01G561400 chr3B 794933671 794936117 2446 True 254.666667 368 89.560333 1 782 3 chr3B.!!$R2 781
2 TraesCS3B01G561400 chr3D 592875789 592879167 3378 True 784.220000 2588 91.729000 1 3016 5 chr3D.!!$R3 3015
3 TraesCS3B01G561400 chrUn 45765146 45766366 1220 True 747.000000 747 78.167000 1054 2284 1 chrUn.!!$R1 1230

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
104 105 1.004044 CCTTGCTCTCCTTGTGATGGT 59.996 52.381 0.0 0.0 0.0 3.55 F
1029 3007 0.943673 CAAGACATGACACGGCACAA 59.056 50.000 0.0 0.0 0.0 3.33 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1579 3566 0.929244 CCTCCATGGGGTTCTTGGAT 59.071 55.0 11.67 0.0 45.18 3.41 R
3026 5108 0.037326 TTGGTCACTCTGCCATCGAC 60.037 55.0 0.00 0.0 34.37 4.20 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 9.307121 CAAACATGTACTAACCACATTTTCAAA 57.693 29.630 0.00 0.00 34.39 2.69
30 31 9.528018 AAACATGTACTAACCACATTTTCAAAG 57.472 29.630 0.00 0.00 34.39 2.77
37 38 2.694628 ACCACATTTTCAAAGAGCAGCA 59.305 40.909 0.00 0.00 0.00 4.41
50 51 8.358582 TCAAAGAGCAGCATCATCTAGATATA 57.641 34.615 4.54 0.00 34.43 0.86
90 91 1.152546 GGTTTCCCACACCCTTGCT 60.153 57.895 0.00 0.00 0.00 3.91
96 97 1.763770 CCACACCCTTGCTCTCCTT 59.236 57.895 0.00 0.00 0.00 3.36
104 105 1.004044 CCTTGCTCTCCTTGTGATGGT 59.996 52.381 0.00 0.00 0.00 3.55
107 108 2.540383 TGCTCTCCTTGTGATGGTAGT 58.460 47.619 0.00 0.00 0.00 2.73
146 147 7.531857 TCATGTGGAACCTTGCTTTAATAAA 57.468 32.000 0.00 0.00 34.36 1.40
205 206 8.394877 TCATTTTCTATGGTACTATTTTGCGTG 58.605 33.333 0.00 0.00 0.00 5.34
211 212 3.749088 TGGTACTATTTTGCGTGAACAGG 59.251 43.478 0.00 0.00 0.00 4.00
247 248 3.773119 GGAAGGACTACTTATCCACCACA 59.227 47.826 0.00 0.00 40.21 4.17
356 704 9.486497 AGTAGCTAAGATATGATGACATGTTTG 57.514 33.333 0.00 0.00 37.87 2.93
471 1241 5.129815 TCAAGGTAGTACAAAGAACACCAGT 59.870 40.000 2.06 0.00 0.00 4.00
725 2702 9.823647 ACTTTGACTATGTATGAATTAGTGAGG 57.176 33.333 0.00 0.00 0.00 3.86
790 2767 4.697756 TCTCAAAGGGCCGCACCG 62.698 66.667 0.00 0.00 40.62 4.94
919 2897 9.420118 ACCAATGTTTTATTAAGATGCCTATCA 57.580 29.630 0.00 0.00 35.70 2.15
931 2909 4.530161 AGATGCCTATCAGACTATTGGACC 59.470 45.833 0.00 0.00 35.70 4.46
946 2924 4.390129 TTGGACCATGCCCTAGTTTTTA 57.610 40.909 0.00 0.00 0.00 1.52
989 2967 2.045340 GCCCACCATGCGTACCTT 60.045 61.111 0.00 0.00 0.00 3.50
1013 2991 6.903883 ATGCGGTAGTACAATAGAAACAAG 57.096 37.500 2.06 0.00 0.00 3.16
1029 3007 0.943673 CAAGACATGACACGGCACAA 59.056 50.000 0.00 0.00 0.00 3.33
1191 3176 1.202698 GCTGGGATTCTATGGCGAACT 60.203 52.381 0.00 0.00 0.00 3.01
1297 3284 2.688794 GGCGACGGAGAAGACTCGT 61.689 63.158 0.00 0.00 43.44 4.18
1323 3310 2.186903 CCCCATCACGACCTTCGG 59.813 66.667 0.03 0.00 45.59 4.30
1347 3334 2.374184 TCCCGTAATTGGCTTCAATGG 58.626 47.619 0.00 0.00 40.63 3.16
1348 3335 1.408702 CCCGTAATTGGCTTCAATGGG 59.591 52.381 0.00 0.00 40.63 4.00
1435 3422 2.166254 GTCTCCGGAACATAAACCCGTA 59.834 50.000 5.23 0.00 41.53 4.02
1496 3483 1.968017 ATGAGTGTGCCCAAGTGCG 60.968 57.895 0.00 0.00 0.00 5.34
1498 3485 3.825160 GAGTGTGCCCAAGTGCGGA 62.825 63.158 0.00 0.00 0.00 5.54
1900 3888 2.357517 AAGGGCGTTCTCTGTGCG 60.358 61.111 0.00 0.00 0.00 5.34
2085 4073 1.808945 CTCCAAAGTGGTCATGCTCAC 59.191 52.381 9.34 9.34 39.03 3.51
2104 4092 4.148825 GGCATGGAGGTCGAGCGT 62.149 66.667 9.28 0.00 0.00 5.07
2105 4093 2.583593 GCATGGAGGTCGAGCGTC 60.584 66.667 9.28 7.20 0.00 5.19
2153 4141 0.808755 CAAGTCGTGCATTTACCCCC 59.191 55.000 0.00 0.00 0.00 5.40
2158 4146 1.433837 CGTGCATTTACCCCCTACGC 61.434 60.000 0.00 0.00 0.00 4.42
2161 4149 1.824658 CATTTACCCCCTACGCGGA 59.175 57.895 12.47 0.00 33.16 5.54
2191 4182 6.683974 TTTGAATGCCTGCTCTAGTAATTC 57.316 37.500 0.00 0.00 31.69 2.17
2194 4185 5.129320 TGAATGCCTGCTCTAGTAATTCTGA 59.871 40.000 0.00 0.00 32.03 3.27
2196 4187 4.026744 TGCCTGCTCTAGTAATTCTGAGT 58.973 43.478 0.00 0.00 0.00 3.41
2199 4190 5.394663 GCCTGCTCTAGTAATTCTGAGTTGA 60.395 44.000 0.00 0.00 0.00 3.18
2214 4205 4.401022 TGAGTTGATGATGATATTGGCCC 58.599 43.478 0.00 0.00 0.00 5.80
2217 4208 6.183361 TGAGTTGATGATGATATTGGCCCTAA 60.183 38.462 0.00 0.00 0.00 2.69
2219 4210 5.581350 TGATGATGATATTGGCCCTAACA 57.419 39.130 0.00 0.00 0.00 2.41
2220 4211 6.143551 TGATGATGATATTGGCCCTAACAT 57.856 37.500 0.00 2.40 0.00 2.71
2226 4217 5.514169 TGATATTGGCCCTAACATGTTTGA 58.486 37.500 17.78 0.00 0.00 2.69
2306 4306 3.306166 CGCGGTGTTAAGGTCTATTTCTG 59.694 47.826 0.00 0.00 0.00 3.02
2324 4324 3.963129 TCTGTTTCACCCTTTGTCTTGT 58.037 40.909 0.00 0.00 0.00 3.16
2335 4335 3.278574 CTTTGTCTTGTGAGGGTGAACA 58.721 45.455 0.00 0.00 0.00 3.18
2340 4340 2.162681 CTTGTGAGGGTGAACATTCCC 58.837 52.381 0.00 0.00 43.71 3.97
2350 4350 4.701956 GTGAACATTCCCACACCAATAG 57.298 45.455 0.00 0.00 33.72 1.73
2352 4352 4.396166 GTGAACATTCCCACACCAATAGAG 59.604 45.833 0.00 0.00 33.72 2.43
2353 4353 3.652057 ACATTCCCACACCAATAGAGG 57.348 47.619 0.00 0.00 0.00 3.69
2354 4354 2.919602 ACATTCCCACACCAATAGAGGT 59.080 45.455 0.00 0.00 44.48 3.85
2359 4359 3.911260 TCCCACACCAATAGAGGTTAACA 59.089 43.478 8.10 0.00 40.77 2.41
2362 4362 5.183140 CCCACACCAATAGAGGTTAACAAAG 59.817 44.000 8.10 0.00 40.77 2.77
2369 4369 7.122204 ACCAATAGAGGTTAACAAAGGTAATGC 59.878 37.037 8.10 0.00 39.34 3.56
2370 4370 7.122055 CCAATAGAGGTTAACAAAGGTAATGCA 59.878 37.037 8.10 0.00 0.00 3.96
2382 4382 4.249638 AGGTAATGCATTTGGGCTCTTA 57.750 40.909 18.75 0.00 34.04 2.10
2409 4409 6.291377 AGAAACACATTCACATGTAGACACT 58.709 36.000 0.00 0.00 42.14 3.55
2445 4449 5.221641 GGTGCATACACTCACCCTATATTGA 60.222 44.000 0.00 0.00 46.57 2.57
2456 4460 4.634004 CACCCTATATTGACGACAAAAGCA 59.366 41.667 4.09 0.00 39.54 3.91
2458 4462 4.634004 CCCTATATTGACGACAAAAGCACA 59.366 41.667 4.09 0.00 39.54 4.57
2470 4474 5.354234 CGACAAAAGCACACCCTATTTCTAT 59.646 40.000 0.00 0.00 0.00 1.98
2476 4480 6.163135 AGCACACCCTATTTCTATGAGTAC 57.837 41.667 0.00 0.00 0.00 2.73
2478 4482 4.982916 CACACCCTATTTCTATGAGTACGC 59.017 45.833 0.00 0.00 0.00 4.42
2483 4487 5.280011 CCCTATTTCTATGAGTACGCCCAAT 60.280 44.000 0.00 0.00 0.00 3.16
2486 4490 4.866508 TTCTATGAGTACGCCCAATAGG 57.133 45.455 0.00 0.00 39.47 2.57
2512 4519 7.218963 GCCGATCTTGTAAAATTTGAGATTGAC 59.781 37.037 15.82 7.10 32.41 3.18
2555 4562 1.000938 GGTCTACGAACACGTTGTCCT 60.001 52.381 0.00 0.00 40.72 3.85
2557 4564 1.001048 TCTACGAACACGTTGTCCTGG 60.001 52.381 0.00 0.00 40.72 4.45
2559 4566 0.529119 ACGAACACGTTGTCCTGGAC 60.529 55.000 19.96 19.96 36.89 4.02
2560 4567 1.219522 CGAACACGTTGTCCTGGACC 61.220 60.000 23.42 8.58 0.00 4.46
2561 4568 1.219522 GAACACGTTGTCCTGGACCG 61.220 60.000 23.42 21.23 0.00 4.79
2568 4575 1.139058 GTTGTCCTGGACCGATAGCAT 59.861 52.381 23.42 0.00 0.00 3.79
2569 4576 1.496060 TGTCCTGGACCGATAGCATT 58.504 50.000 23.42 0.00 0.00 3.56
2571 4578 0.758734 TCCTGGACCGATAGCATTGG 59.241 55.000 0.00 0.00 39.88 3.16
2577 4584 4.277476 TGGACCGATAGCATTGGAAATTT 58.723 39.130 8.82 0.00 37.26 1.82
2580 4588 3.384467 ACCGATAGCATTGGAAATTTGGG 59.616 43.478 0.00 0.00 37.26 4.12
2586 4594 7.596248 CGATAGCATTGGAAATTTGGGAATAAG 59.404 37.037 0.00 0.00 0.00 1.73
2588 4596 7.019656 AGCATTGGAAATTTGGGAATAAGTT 57.980 32.000 0.00 0.00 0.00 2.66
2592 4600 7.610580 TTGGAAATTTGGGAATAAGTTCAGT 57.389 32.000 0.00 0.00 36.01 3.41
2608 4616 6.870971 AGTTCAGTTAAATTTAAGCACCGA 57.129 33.333 10.92 1.69 0.00 4.69
2610 4618 7.305474 AGTTCAGTTAAATTTAAGCACCGATG 58.695 34.615 10.92 3.00 0.00 3.84
2631 4639 5.036117 TGCCATATCTAGAACTTGAACCC 57.964 43.478 0.00 0.00 0.00 4.11
2676 4684 8.520351 ACAAAGTAATAACCTAACCAAATGAGC 58.480 33.333 0.00 0.00 0.00 4.26
2679 4687 7.862675 AGTAATAACCTAACCAAATGAGCTCT 58.137 34.615 16.19 0.00 0.00 4.09
2691 4699 6.820656 ACCAAATGAGCTCTGTTCACTAATAG 59.179 38.462 16.19 0.00 0.00 1.73
2705 4713 7.721842 TGTTCACTAATAGATTTGGGTTGTTCA 59.278 33.333 0.00 0.00 0.00 3.18
2708 4716 6.974622 CACTAATAGATTTGGGTTGTTCATGC 59.025 38.462 0.00 0.00 0.00 4.06
2709 4717 6.891908 ACTAATAGATTTGGGTTGTTCATGCT 59.108 34.615 0.00 0.00 0.00 3.79
2813 4822 6.646653 TGAGAAGGCGTATAAATATGCTTCAG 59.353 38.462 12.61 0.00 43.18 3.02
2816 4825 6.545504 AGGCGTATAAATATGCTTCAGTTG 57.454 37.500 12.61 0.00 43.18 3.16
2820 4829 6.018262 GCGTATAAATATGCTTCAGTTGTGGA 60.018 38.462 6.88 0.00 41.04 4.02
2821 4830 7.307989 GCGTATAAATATGCTTCAGTTGTGGAT 60.308 37.037 6.88 0.00 41.04 3.41
2833 4842 6.773976 TCAGTTGTGGATTTCTTCTTTTGT 57.226 33.333 0.00 0.00 0.00 2.83
2838 4847 3.735746 GTGGATTTCTTCTTTTGTTGGCG 59.264 43.478 0.00 0.00 0.00 5.69
2848 4857 3.191581 TCTTTTGTTGGCGAGTTTTGTCA 59.808 39.130 0.00 0.00 0.00 3.58
2849 4858 3.791973 TTTGTTGGCGAGTTTTGTCAT 57.208 38.095 0.00 0.00 0.00 3.06
2878 4887 7.344093 AGCCTATATCATATACTGTGCTGATGT 59.656 37.037 10.12 7.32 31.20 3.06
2905 4915 1.856265 GAAAGAGCCACCAACCGCAG 61.856 60.000 0.00 0.00 0.00 5.18
2927 4937 6.475727 GCAGAGCGTCTTAATCAATTGTACTA 59.524 38.462 5.13 0.00 0.00 1.82
2929 4939 7.488150 CAGAGCGTCTTAATCAATTGTACTACA 59.512 37.037 5.13 0.00 0.00 2.74
2930 4940 7.702772 AGAGCGTCTTAATCAATTGTACTACAG 59.297 37.037 5.13 0.00 0.00 2.74
2931 4941 7.321153 AGCGTCTTAATCAATTGTACTACAGT 58.679 34.615 5.13 0.00 0.00 3.55
2932 4942 8.464404 AGCGTCTTAATCAATTGTACTACAGTA 58.536 33.333 5.13 0.00 0.00 2.74
2934 4944 9.999009 CGTCTTAATCAATTGTACTACAGTAGA 57.001 33.333 14.94 0.00 0.00 2.59
2972 5054 5.413833 AGTTAGCATTCTTGACATGACTTGG 59.586 40.000 0.00 0.00 0.00 3.61
3023 5105 5.409643 CGAAGGTTAAGAATAGCATGGTG 57.590 43.478 7.89 0.00 0.00 4.17
3024 5106 5.116180 CGAAGGTTAAGAATAGCATGGTGA 58.884 41.667 7.89 0.00 0.00 4.02
3025 5107 5.006746 CGAAGGTTAAGAATAGCATGGTGAC 59.993 44.000 7.89 0.00 0.00 3.67
3026 5108 4.442706 AGGTTAAGAATAGCATGGTGACG 58.557 43.478 7.89 0.00 0.00 4.35
3027 5109 4.081087 AGGTTAAGAATAGCATGGTGACGT 60.081 41.667 7.89 0.00 0.00 4.34
3028 5110 4.270325 GGTTAAGAATAGCATGGTGACGTC 59.730 45.833 9.11 9.11 0.00 4.34
3029 5111 2.209838 AGAATAGCATGGTGACGTCG 57.790 50.000 11.62 0.00 0.00 5.12
3030 5112 1.749063 AGAATAGCATGGTGACGTCGA 59.251 47.619 11.62 0.00 0.00 4.20
3031 5113 2.362397 AGAATAGCATGGTGACGTCGAT 59.638 45.455 11.62 0.00 0.00 3.59
3032 5114 2.140065 ATAGCATGGTGACGTCGATG 57.860 50.000 11.62 13.39 0.00 3.84
3033 5115 0.102300 TAGCATGGTGACGTCGATGG 59.898 55.000 11.62 0.37 0.00 3.51
3034 5116 2.813179 GCATGGTGACGTCGATGGC 61.813 63.158 11.62 6.55 0.00 4.40
3035 5117 1.447663 CATGGTGACGTCGATGGCA 60.448 57.895 9.73 9.73 0.00 4.92
3036 5118 1.153568 ATGGTGACGTCGATGGCAG 60.154 57.895 15.03 0.00 0.00 4.85
3037 5119 1.604147 ATGGTGACGTCGATGGCAGA 61.604 55.000 15.03 3.72 0.00 4.26
3038 5120 1.517257 GGTGACGTCGATGGCAGAG 60.517 63.158 15.03 0.00 0.00 3.35
3039 5121 1.213013 GTGACGTCGATGGCAGAGT 59.787 57.895 15.03 0.00 0.00 3.24
3040 5122 1.073216 GTGACGTCGATGGCAGAGTG 61.073 60.000 15.03 0.00 0.00 3.51
3041 5123 1.241315 TGACGTCGATGGCAGAGTGA 61.241 55.000 9.73 0.00 0.00 3.41
3042 5124 0.798771 GACGTCGATGGCAGAGTGAC 60.799 60.000 5.34 0.00 0.00 3.67
3043 5125 1.517257 CGTCGATGGCAGAGTGACC 60.517 63.158 0.00 0.00 0.00 4.02
3044 5126 1.591703 GTCGATGGCAGAGTGACCA 59.408 57.895 0.00 0.00 41.06 4.02
3045 5127 0.037326 GTCGATGGCAGAGTGACCAA 60.037 55.000 0.00 0.00 39.96 3.67
3046 5128 0.684535 TCGATGGCAGAGTGACCAAA 59.315 50.000 0.00 0.00 39.96 3.28
3047 5129 0.798776 CGATGGCAGAGTGACCAAAC 59.201 55.000 0.00 0.00 39.96 2.93
3048 5130 1.877680 CGATGGCAGAGTGACCAAACA 60.878 52.381 0.00 0.00 39.96 2.83
3049 5131 2.229792 GATGGCAGAGTGACCAAACAA 58.770 47.619 0.00 0.00 39.96 2.83
3050 5132 1.679139 TGGCAGAGTGACCAAACAAG 58.321 50.000 0.00 0.00 31.46 3.16
3051 5133 0.954452 GGCAGAGTGACCAAACAAGG 59.046 55.000 0.00 0.00 0.00 3.61
3052 5134 1.680338 GCAGAGTGACCAAACAAGGT 58.320 50.000 0.00 0.00 46.82 3.50
3053 5135 2.486548 GGCAGAGTGACCAAACAAGGTA 60.487 50.000 0.00 0.00 43.38 3.08
3054 5136 2.808543 GCAGAGTGACCAAACAAGGTAG 59.191 50.000 0.00 0.00 43.38 3.18
3055 5137 3.494398 GCAGAGTGACCAAACAAGGTAGA 60.494 47.826 0.00 0.00 43.38 2.59
3056 5138 4.703897 CAGAGTGACCAAACAAGGTAGAA 58.296 43.478 0.00 0.00 43.38 2.10
3057 5139 4.752101 CAGAGTGACCAAACAAGGTAGAAG 59.248 45.833 0.00 0.00 43.38 2.85
3058 5140 3.477530 AGTGACCAAACAAGGTAGAAGC 58.522 45.455 0.00 0.00 43.38 3.86
3059 5141 2.552743 GTGACCAAACAAGGTAGAAGCC 59.447 50.000 0.00 0.00 43.38 4.35
3060 5142 2.441750 TGACCAAACAAGGTAGAAGCCT 59.558 45.455 0.00 0.00 43.38 4.58
3061 5143 3.075148 GACCAAACAAGGTAGAAGCCTC 58.925 50.000 0.00 0.00 43.38 4.70
3062 5144 2.441750 ACCAAACAAGGTAGAAGCCTCA 59.558 45.455 0.00 0.00 40.98 3.86
3063 5145 3.117663 ACCAAACAAGGTAGAAGCCTCAA 60.118 43.478 0.00 0.00 40.98 3.02
3064 5146 4.082125 CCAAACAAGGTAGAAGCCTCAAT 58.918 43.478 0.00 0.00 38.03 2.57
3065 5147 5.222048 ACCAAACAAGGTAGAAGCCTCAATA 60.222 40.000 0.00 0.00 40.98 1.90
3066 5148 5.888161 CCAAACAAGGTAGAAGCCTCAATAT 59.112 40.000 0.00 0.00 38.03 1.28
3067 5149 6.183360 CCAAACAAGGTAGAAGCCTCAATATG 60.183 42.308 0.00 0.00 38.03 1.78
3068 5150 5.957771 ACAAGGTAGAAGCCTCAATATGA 57.042 39.130 0.00 0.00 38.03 2.15
3069 5151 6.506538 ACAAGGTAGAAGCCTCAATATGAT 57.493 37.500 0.00 0.00 38.03 2.45
3070 5152 6.529220 ACAAGGTAGAAGCCTCAATATGATC 58.471 40.000 0.00 0.00 38.03 2.92
3071 5153 6.328672 ACAAGGTAGAAGCCTCAATATGATCT 59.671 38.462 0.00 0.00 38.03 2.75
3072 5154 6.357579 AGGTAGAAGCCTCAATATGATCTG 57.642 41.667 0.00 0.00 32.39 2.90
3073 5155 6.080682 AGGTAGAAGCCTCAATATGATCTGA 58.919 40.000 0.00 0.00 32.39 3.27
3074 5156 6.556495 AGGTAGAAGCCTCAATATGATCTGAA 59.444 38.462 0.00 0.00 32.39 3.02
3075 5157 6.873076 GGTAGAAGCCTCAATATGATCTGAAG 59.127 42.308 0.00 0.00 0.00 3.02
3076 5158 6.744175 AGAAGCCTCAATATGATCTGAAGA 57.256 37.500 0.00 0.00 0.00 2.87
3077 5159 6.523840 AGAAGCCTCAATATGATCTGAAGAC 58.476 40.000 0.00 0.00 0.00 3.01
3078 5160 5.226194 AGCCTCAATATGATCTGAAGACC 57.774 43.478 0.00 0.00 0.00 3.85
3079 5161 4.906664 AGCCTCAATATGATCTGAAGACCT 59.093 41.667 0.00 0.00 0.00 3.85
3080 5162 4.996122 GCCTCAATATGATCTGAAGACCTG 59.004 45.833 0.00 0.00 0.00 4.00
3081 5163 5.454471 GCCTCAATATGATCTGAAGACCTGT 60.454 44.000 0.00 0.00 0.00 4.00
3082 5164 5.990386 CCTCAATATGATCTGAAGACCTGTG 59.010 44.000 0.00 0.00 0.00 3.66
3083 5165 5.922053 TCAATATGATCTGAAGACCTGTGG 58.078 41.667 0.00 0.00 0.00 4.17
3084 5166 5.662657 TCAATATGATCTGAAGACCTGTGGA 59.337 40.000 0.00 0.00 0.00 4.02
3085 5167 6.156775 TCAATATGATCTGAAGACCTGTGGAA 59.843 38.462 0.00 0.00 0.00 3.53
3086 5168 3.969287 TGATCTGAAGACCTGTGGAAG 57.031 47.619 0.00 0.00 0.00 3.46
3087 5169 3.510459 TGATCTGAAGACCTGTGGAAGA 58.490 45.455 0.00 0.00 0.00 2.87
3088 5170 4.099633 TGATCTGAAGACCTGTGGAAGAT 58.900 43.478 0.00 0.00 0.00 2.40
3089 5171 3.969287 TCTGAAGACCTGTGGAAGATG 57.031 47.619 0.00 0.00 0.00 2.90
3090 5172 2.568956 TCTGAAGACCTGTGGAAGATGG 59.431 50.000 0.00 0.00 0.00 3.51
3091 5173 2.304180 CTGAAGACCTGTGGAAGATGGT 59.696 50.000 0.00 0.00 35.23 3.55
3092 5174 2.038952 TGAAGACCTGTGGAAGATGGTG 59.961 50.000 0.00 0.00 32.30 4.17
3093 5175 0.987294 AGACCTGTGGAAGATGGTGG 59.013 55.000 0.00 0.00 32.30 4.61
3094 5176 0.678048 GACCTGTGGAAGATGGTGGC 60.678 60.000 0.00 0.00 32.30 5.01
3095 5177 1.746615 CCTGTGGAAGATGGTGGCG 60.747 63.158 0.00 0.00 0.00 5.69
3096 5178 1.296392 CTGTGGAAGATGGTGGCGA 59.704 57.895 0.00 0.00 0.00 5.54
3097 5179 1.003839 TGTGGAAGATGGTGGCGAC 60.004 57.895 0.00 0.00 0.00 5.19
3098 5180 2.100631 GTGGAAGATGGTGGCGACG 61.101 63.158 0.00 0.00 0.00 5.12
3099 5181 2.279810 TGGAAGATGGTGGCGACGA 61.280 57.895 0.00 0.00 0.00 4.20
3100 5182 1.810030 GGAAGATGGTGGCGACGAC 60.810 63.158 0.00 0.00 0.00 4.34
3101 5183 1.080093 GAAGATGGTGGCGACGACA 60.080 57.895 0.00 0.00 0.00 4.35
3102 5184 1.352156 GAAGATGGTGGCGACGACAC 61.352 60.000 25.82 25.82 41.56 3.67
3103 5185 2.048597 GATGGTGGCGACGACACA 60.049 61.111 33.19 20.22 44.59 3.72
3104 5186 2.357034 ATGGTGGCGACGACACAC 60.357 61.111 33.19 22.63 44.59 3.82
3105 5187 4.934942 TGGTGGCGACGACACACG 62.935 66.667 33.19 0.14 44.59 4.49
3106 5188 4.634133 GGTGGCGACGACACACGA 62.634 66.667 33.19 0.00 44.59 4.35
3107 5189 3.097728 GTGGCGACGACACACGAG 61.098 66.667 28.53 0.00 41.94 4.18
3108 5190 3.588906 TGGCGACGACACACGAGT 61.589 61.111 0.00 0.00 45.77 4.18
3121 5203 3.733960 CGAGTGCGTCTGACCGGA 61.734 66.667 9.46 0.00 0.00 5.14
3122 5204 2.885861 GAGTGCGTCTGACCGGAT 59.114 61.111 9.46 0.00 0.00 4.18
3123 5205 1.215647 GAGTGCGTCTGACCGGATT 59.784 57.895 9.46 0.00 0.00 3.01
3124 5206 1.078759 GAGTGCGTCTGACCGGATTG 61.079 60.000 9.46 0.00 0.00 2.67
3125 5207 1.374252 GTGCGTCTGACCGGATTGT 60.374 57.895 9.46 0.00 0.00 2.71
3126 5208 1.374125 TGCGTCTGACCGGATTGTG 60.374 57.895 9.46 0.00 0.00 3.33
3127 5209 2.740714 GCGTCTGACCGGATTGTGC 61.741 63.158 9.46 0.21 0.00 4.57
3128 5210 2.100631 CGTCTGACCGGATTGTGCC 61.101 63.158 9.46 0.00 0.00 5.01
3129 5211 1.745489 GTCTGACCGGATTGTGCCC 60.745 63.158 9.46 0.00 0.00 5.36
3130 5212 2.438434 CTGACCGGATTGTGCCCC 60.438 66.667 9.46 0.00 0.00 5.80
3131 5213 3.253061 TGACCGGATTGTGCCCCA 61.253 61.111 9.46 0.00 0.00 4.96
3132 5214 2.438434 GACCGGATTGTGCCCCAG 60.438 66.667 9.46 0.00 0.00 4.45
3133 5215 2.933287 ACCGGATTGTGCCCCAGA 60.933 61.111 9.46 0.00 0.00 3.86
3134 5216 2.438434 CCGGATTGTGCCCCAGAC 60.438 66.667 0.00 0.00 0.00 3.51
3135 5217 2.438434 CGGATTGTGCCCCAGACC 60.438 66.667 0.00 0.00 0.00 3.85
3136 5218 2.043953 GGATTGTGCCCCAGACCC 60.044 66.667 0.00 0.00 0.00 4.46
3137 5219 2.616458 GGATTGTGCCCCAGACCCT 61.616 63.158 0.00 0.00 0.00 4.34
3138 5220 1.379044 GATTGTGCCCCAGACCCTG 60.379 63.158 0.00 0.00 0.00 4.45
3139 5221 2.142292 GATTGTGCCCCAGACCCTGT 62.142 60.000 0.00 0.00 0.00 4.00
3140 5222 0.844661 ATTGTGCCCCAGACCCTGTA 60.845 55.000 0.00 0.00 0.00 2.74
3141 5223 0.844661 TTGTGCCCCAGACCCTGTAT 60.845 55.000 0.00 0.00 0.00 2.29
3142 5224 1.224592 GTGCCCCAGACCCTGTATG 59.775 63.158 0.00 0.00 0.00 2.39
3143 5225 1.229820 TGCCCCAGACCCTGTATGT 60.230 57.895 0.00 0.00 0.00 2.29
3144 5226 1.224592 GCCCCAGACCCTGTATGTG 59.775 63.158 0.00 0.00 0.00 3.21
3145 5227 1.915228 CCCCAGACCCTGTATGTGG 59.085 63.158 0.00 0.00 0.00 4.17
3146 5228 1.224592 CCCAGACCCTGTATGTGGC 59.775 63.158 0.00 0.00 0.00 5.01
3147 5229 1.274703 CCCAGACCCTGTATGTGGCT 61.275 60.000 0.00 0.00 0.00 4.75
3148 5230 0.179000 CCAGACCCTGTATGTGGCTC 59.821 60.000 0.00 0.00 0.00 4.70
3149 5231 0.179100 CAGACCCTGTATGTGGCTCG 60.179 60.000 0.00 0.00 0.00 5.03
3150 5232 1.144057 GACCCTGTATGTGGCTCGG 59.856 63.158 0.00 0.00 0.00 4.63
3151 5233 2.203070 CCCTGTATGTGGCTCGGC 60.203 66.667 0.00 0.00 0.00 5.54
3152 5234 2.735772 CCCTGTATGTGGCTCGGCT 61.736 63.158 0.00 0.00 0.00 5.52
3153 5235 1.522355 CCTGTATGTGGCTCGGCTG 60.522 63.158 0.00 0.00 0.00 4.85
3154 5236 1.522355 CTGTATGTGGCTCGGCTGG 60.522 63.158 0.00 0.00 0.00 4.85
3155 5237 2.203070 GTATGTGGCTCGGCTGGG 60.203 66.667 0.00 0.00 0.00 4.45
3156 5238 3.479203 TATGTGGCTCGGCTGGGG 61.479 66.667 0.00 0.00 0.00 4.96
3165 5247 4.489771 CGGCTGGGGCTTCCGAAT 62.490 66.667 0.00 0.00 45.53 3.34
3166 5248 2.830370 GGCTGGGGCTTCCGAATG 60.830 66.667 0.00 0.00 38.76 2.67
3167 5249 2.272146 GCTGGGGCTTCCGAATGA 59.728 61.111 0.00 0.00 38.76 2.57
3168 5250 1.821332 GCTGGGGCTTCCGAATGAG 60.821 63.158 0.00 0.00 38.76 2.90
3169 5251 1.604378 CTGGGGCTTCCGAATGAGT 59.396 57.895 0.00 0.00 38.76 3.41
3170 5252 0.035056 CTGGGGCTTCCGAATGAGTT 60.035 55.000 0.00 0.00 38.76 3.01
3171 5253 0.404040 TGGGGCTTCCGAATGAGTTT 59.596 50.000 0.00 0.00 38.76 2.66
3172 5254 1.095600 GGGGCTTCCGAATGAGTTTC 58.904 55.000 0.00 0.00 0.00 2.78
3189 5271 3.590824 CGGCTTCCGGCTTTTGAT 58.409 55.556 0.00 0.00 44.15 2.57
3190 5272 1.137404 CGGCTTCCGGCTTTTGATG 59.863 57.895 0.00 0.00 44.15 3.07
3191 5273 1.586154 CGGCTTCCGGCTTTTGATGT 61.586 55.000 0.00 0.00 44.15 3.06
3192 5274 0.603065 GGCTTCCGGCTTTTGATGTT 59.397 50.000 0.00 0.00 41.46 2.71
3193 5275 1.816224 GGCTTCCGGCTTTTGATGTTA 59.184 47.619 0.00 0.00 41.46 2.41
3194 5276 2.159379 GGCTTCCGGCTTTTGATGTTAG 60.159 50.000 0.00 0.00 41.46 2.34
3195 5277 2.159379 GCTTCCGGCTTTTGATGTTAGG 60.159 50.000 0.00 0.00 38.06 2.69
3196 5278 1.459450 TCCGGCTTTTGATGTTAGGC 58.541 50.000 0.00 0.00 0.00 3.93
3197 5279 1.004277 TCCGGCTTTTGATGTTAGGCT 59.996 47.619 0.00 0.00 32.77 4.58
3198 5280 1.818674 CCGGCTTTTGATGTTAGGCTT 59.181 47.619 0.00 0.00 32.77 4.35
3199 5281 3.013921 CCGGCTTTTGATGTTAGGCTTA 58.986 45.455 0.00 0.00 32.77 3.09
3200 5282 3.065371 CCGGCTTTTGATGTTAGGCTTAG 59.935 47.826 0.00 0.00 32.77 2.18
3201 5283 3.065371 CGGCTTTTGATGTTAGGCTTAGG 59.935 47.826 0.00 0.00 32.77 2.69
3202 5284 4.017126 GGCTTTTGATGTTAGGCTTAGGT 58.983 43.478 0.00 0.00 0.00 3.08
3203 5285 4.142381 GGCTTTTGATGTTAGGCTTAGGTG 60.142 45.833 0.00 0.00 0.00 4.00
3204 5286 4.700213 GCTTTTGATGTTAGGCTTAGGTGA 59.300 41.667 0.00 0.00 0.00 4.02
3205 5287 5.163713 GCTTTTGATGTTAGGCTTAGGTGAG 60.164 44.000 0.00 0.00 0.00 3.51
3206 5288 5.499004 TTTGATGTTAGGCTTAGGTGAGT 57.501 39.130 0.00 0.00 0.00 3.41
3207 5289 4.471904 TGATGTTAGGCTTAGGTGAGTG 57.528 45.455 0.00 0.00 0.00 3.51
3208 5290 3.197766 TGATGTTAGGCTTAGGTGAGTGG 59.802 47.826 0.00 0.00 0.00 4.00
3209 5291 2.616524 TGTTAGGCTTAGGTGAGTGGT 58.383 47.619 0.00 0.00 0.00 4.16
3210 5292 2.976882 TGTTAGGCTTAGGTGAGTGGTT 59.023 45.455 0.00 0.00 0.00 3.67
3211 5293 3.393278 TGTTAGGCTTAGGTGAGTGGTTT 59.607 43.478 0.00 0.00 0.00 3.27
3212 5294 2.568623 AGGCTTAGGTGAGTGGTTTG 57.431 50.000 0.00 0.00 0.00 2.93
3213 5295 1.073923 AGGCTTAGGTGAGTGGTTTGG 59.926 52.381 0.00 0.00 0.00 3.28
3214 5296 1.534729 GCTTAGGTGAGTGGTTTGGG 58.465 55.000 0.00 0.00 0.00 4.12
3215 5297 1.202891 GCTTAGGTGAGTGGTTTGGGT 60.203 52.381 0.00 0.00 0.00 4.51
3216 5298 2.039348 GCTTAGGTGAGTGGTTTGGGTA 59.961 50.000 0.00 0.00 0.00 3.69
3217 5299 3.868754 GCTTAGGTGAGTGGTTTGGGTAG 60.869 52.174 0.00 0.00 0.00 3.18
3218 5300 1.815757 AGGTGAGTGGTTTGGGTAGT 58.184 50.000 0.00 0.00 0.00 2.73
3219 5301 1.420138 AGGTGAGTGGTTTGGGTAGTG 59.580 52.381 0.00 0.00 0.00 2.74
3220 5302 1.544759 GGTGAGTGGTTTGGGTAGTGG 60.545 57.143 0.00 0.00 0.00 4.00
3221 5303 0.109723 TGAGTGGTTTGGGTAGTGGC 59.890 55.000 0.00 0.00 0.00 5.01
3222 5304 0.608308 GAGTGGTTTGGGTAGTGGCC 60.608 60.000 0.00 0.00 0.00 5.36
3230 5312 2.506472 GGTAGTGGCCCAGCTAGC 59.494 66.667 6.62 6.62 0.00 3.42
3231 5313 2.367202 GGTAGTGGCCCAGCTAGCA 61.367 63.158 18.83 0.00 36.18 3.49
3232 5314 1.153349 GTAGTGGCCCAGCTAGCAC 60.153 63.158 18.83 4.90 0.00 4.40
3233 5315 2.367202 TAGTGGCCCAGCTAGCACC 61.367 63.158 18.83 12.89 0.00 5.01
3234 5316 4.803908 GTGGCCCAGCTAGCACCC 62.804 72.222 18.83 11.35 0.00 4.61
3237 5319 3.732849 GCCCAGCTAGCACCCCTT 61.733 66.667 18.83 0.00 0.00 3.95
3238 5320 2.592308 CCCAGCTAGCACCCCTTC 59.408 66.667 18.83 0.00 0.00 3.46
3239 5321 2.300967 CCCAGCTAGCACCCCTTCA 61.301 63.158 18.83 0.00 0.00 3.02
3240 5322 1.639635 CCCAGCTAGCACCCCTTCAT 61.640 60.000 18.83 0.00 0.00 2.57
3241 5323 0.179034 CCAGCTAGCACCCCTTCATC 60.179 60.000 18.83 0.00 0.00 2.92
3242 5324 0.543277 CAGCTAGCACCCCTTCATCA 59.457 55.000 18.83 0.00 0.00 3.07
3243 5325 1.142465 CAGCTAGCACCCCTTCATCAT 59.858 52.381 18.83 0.00 0.00 2.45
3244 5326 2.369860 CAGCTAGCACCCCTTCATCATA 59.630 50.000 18.83 0.00 0.00 2.15
3245 5327 3.008813 CAGCTAGCACCCCTTCATCATAT 59.991 47.826 18.83 0.00 0.00 1.78
3246 5328 3.654806 AGCTAGCACCCCTTCATCATATT 59.345 43.478 18.83 0.00 0.00 1.28
3247 5329 3.755378 GCTAGCACCCCTTCATCATATTG 59.245 47.826 10.63 0.00 0.00 1.90
3248 5330 2.590821 AGCACCCCTTCATCATATTGC 58.409 47.619 0.00 0.00 0.00 3.56
3249 5331 2.091720 AGCACCCCTTCATCATATTGCA 60.092 45.455 0.00 0.00 0.00 4.08
3250 5332 2.895404 GCACCCCTTCATCATATTGCAT 59.105 45.455 0.00 0.00 0.00 3.96
3251 5333 4.081406 GCACCCCTTCATCATATTGCATA 58.919 43.478 0.00 0.00 0.00 3.14
3252 5334 4.157289 GCACCCCTTCATCATATTGCATAG 59.843 45.833 0.00 0.00 0.00 2.23
3253 5335 4.703575 CACCCCTTCATCATATTGCATAGG 59.296 45.833 0.00 0.00 0.00 2.57
3254 5336 4.603171 ACCCCTTCATCATATTGCATAGGA 59.397 41.667 0.00 0.00 0.00 2.94
3255 5337 5.191426 CCCCTTCATCATATTGCATAGGAG 58.809 45.833 0.00 0.00 0.00 3.69
3256 5338 5.280882 CCCCTTCATCATATTGCATAGGAGT 60.281 44.000 0.00 0.00 0.00 3.85
3257 5339 6.070021 CCCCTTCATCATATTGCATAGGAGTA 60.070 42.308 0.00 0.00 0.00 2.59
3258 5340 6.820656 CCCTTCATCATATTGCATAGGAGTAC 59.179 42.308 0.00 0.00 0.00 2.73
3259 5341 6.820656 CCTTCATCATATTGCATAGGAGTACC 59.179 42.308 0.00 0.00 0.00 3.34
3260 5342 5.965922 TCATCATATTGCATAGGAGTACCG 58.034 41.667 0.00 0.00 41.83 4.02
3261 5343 4.801330 TCATATTGCATAGGAGTACCGG 57.199 45.455 0.00 0.00 41.83 5.28
3262 5344 3.056107 TCATATTGCATAGGAGTACCGGC 60.056 47.826 0.00 0.00 41.83 6.13
3263 5345 1.128200 ATTGCATAGGAGTACCGGCA 58.872 50.000 0.00 0.00 41.83 5.69
3264 5346 1.128200 TTGCATAGGAGTACCGGCAT 58.872 50.000 0.00 0.00 40.24 4.40
3265 5347 2.003937 TGCATAGGAGTACCGGCATA 57.996 50.000 0.00 0.00 41.83 3.14
3266 5348 2.536066 TGCATAGGAGTACCGGCATAT 58.464 47.619 0.00 0.00 41.83 1.78
3267 5349 2.233676 TGCATAGGAGTACCGGCATATG 59.766 50.000 0.00 4.11 41.83 1.78
3268 5350 2.233922 GCATAGGAGTACCGGCATATGT 59.766 50.000 0.00 0.00 41.83 2.29
3269 5351 3.306780 GCATAGGAGTACCGGCATATGTT 60.307 47.826 0.00 0.00 41.83 2.71
3270 5352 2.910688 AGGAGTACCGGCATATGTTG 57.089 50.000 0.00 0.00 41.83 3.33
3281 5363 3.088194 GCATATGTTGCCAAGATGGTG 57.912 47.619 4.29 0.00 46.15 4.17
3282 5364 2.223876 GCATATGTTGCCAAGATGGTGG 60.224 50.000 4.29 0.00 46.15 4.61
3283 5365 3.289836 CATATGTTGCCAAGATGGTGGA 58.710 45.455 0.00 0.00 41.65 4.02
3284 5366 2.537633 ATGTTGCCAAGATGGTGGAT 57.462 45.000 0.00 0.00 41.65 3.41
3285 5367 2.307496 TGTTGCCAAGATGGTGGATT 57.693 45.000 0.00 0.00 41.65 3.01
3286 5368 2.170166 TGTTGCCAAGATGGTGGATTC 58.830 47.619 0.00 0.00 41.65 2.52
3287 5369 2.170166 GTTGCCAAGATGGTGGATTCA 58.830 47.619 0.00 0.00 41.65 2.57
3288 5370 2.133281 TGCCAAGATGGTGGATTCAG 57.867 50.000 0.00 0.00 41.65 3.02
3289 5371 1.341285 TGCCAAGATGGTGGATTCAGG 60.341 52.381 0.00 0.00 41.65 3.86
3290 5372 1.396653 CCAAGATGGTGGATTCAGGC 58.603 55.000 0.00 0.00 41.65 4.85
3291 5373 1.341285 CCAAGATGGTGGATTCAGGCA 60.341 52.381 0.00 0.00 41.65 4.75
3292 5374 1.747355 CAAGATGGTGGATTCAGGCAC 59.253 52.381 0.00 0.00 0.00 5.01
3293 5375 0.994247 AGATGGTGGATTCAGGCACA 59.006 50.000 0.00 0.00 0.00 4.57
3294 5376 1.567649 AGATGGTGGATTCAGGCACAT 59.432 47.619 0.00 0.00 0.00 3.21
3295 5377 2.024655 AGATGGTGGATTCAGGCACATT 60.025 45.455 0.00 0.00 0.00 2.71
3296 5378 1.548081 TGGTGGATTCAGGCACATTG 58.452 50.000 0.00 0.00 0.00 2.82
3297 5379 1.203038 TGGTGGATTCAGGCACATTGT 60.203 47.619 0.00 0.00 0.00 2.71
3298 5380 1.895131 GGTGGATTCAGGCACATTGTT 59.105 47.619 0.00 0.00 0.00 2.83
3299 5381 2.353011 GGTGGATTCAGGCACATTGTTG 60.353 50.000 0.00 0.00 0.00 3.33
3300 5382 2.297033 GTGGATTCAGGCACATTGTTGT 59.703 45.455 0.00 0.00 36.15 3.32
3301 5383 3.505680 GTGGATTCAGGCACATTGTTGTA 59.494 43.478 0.00 0.00 33.76 2.41
3302 5384 4.022416 GTGGATTCAGGCACATTGTTGTAA 60.022 41.667 0.00 0.00 33.76 2.41
3303 5385 4.771577 TGGATTCAGGCACATTGTTGTAAT 59.228 37.500 0.00 0.00 33.76 1.89
3304 5386 5.948758 TGGATTCAGGCACATTGTTGTAATA 59.051 36.000 0.00 0.00 33.76 0.98
3305 5387 6.127758 TGGATTCAGGCACATTGTTGTAATAC 60.128 38.462 0.00 0.00 33.76 1.89
3306 5388 6.095440 GGATTCAGGCACATTGTTGTAATACT 59.905 38.462 0.00 0.00 33.76 2.12
3307 5389 6.892658 TTCAGGCACATTGTTGTAATACTT 57.107 33.333 0.00 0.00 33.76 2.24
3308 5390 6.892658 TCAGGCACATTGTTGTAATACTTT 57.107 33.333 0.00 0.00 33.76 2.66
3309 5391 6.676950 TCAGGCACATTGTTGTAATACTTTG 58.323 36.000 0.00 0.00 33.76 2.77
3310 5392 6.264292 TCAGGCACATTGTTGTAATACTTTGT 59.736 34.615 0.00 0.00 33.76 2.83
3311 5393 7.445707 TCAGGCACATTGTTGTAATACTTTGTA 59.554 33.333 0.00 0.00 33.76 2.41
3312 5394 8.243426 CAGGCACATTGTTGTAATACTTTGTAT 58.757 33.333 0.00 0.00 33.76 2.29
3313 5395 8.243426 AGGCACATTGTTGTAATACTTTGTATG 58.757 33.333 0.00 0.00 33.76 2.39
3314 5396 7.487829 GGCACATTGTTGTAATACTTTGTATGG 59.512 37.037 0.00 0.00 33.76 2.74
3315 5397 8.026607 GCACATTGTTGTAATACTTTGTATGGT 58.973 33.333 0.00 0.00 33.76 3.55
3316 5398 9.554724 CACATTGTTGTAATACTTTGTATGGTC 57.445 33.333 0.00 0.00 33.76 4.02
3317 5399 8.736244 ACATTGTTGTAATACTTTGTATGGTCC 58.264 33.333 0.00 0.00 33.16 4.46
3318 5400 8.956426 CATTGTTGTAATACTTTGTATGGTCCT 58.044 33.333 0.00 0.00 0.00 3.85
3319 5401 8.556213 TTGTTGTAATACTTTGTATGGTCCTC 57.444 34.615 0.00 0.00 0.00 3.71
3320 5402 6.814644 TGTTGTAATACTTTGTATGGTCCTCG 59.185 38.462 0.00 0.00 0.00 4.63
3321 5403 6.778834 TGTAATACTTTGTATGGTCCTCGA 57.221 37.500 0.00 0.00 0.00 4.04
3322 5404 6.802608 TGTAATACTTTGTATGGTCCTCGAG 58.197 40.000 5.13 5.13 0.00 4.04
3323 5405 6.604396 TGTAATACTTTGTATGGTCCTCGAGA 59.396 38.462 15.71 0.00 0.00 4.04
3324 5406 6.540438 AATACTTTGTATGGTCCTCGAGAA 57.460 37.500 15.71 0.00 0.00 2.87
3325 5407 6.732896 ATACTTTGTATGGTCCTCGAGAAT 57.267 37.500 15.71 4.64 0.00 2.40
3326 5408 7.834881 ATACTTTGTATGGTCCTCGAGAATA 57.165 36.000 15.71 3.64 0.00 1.75
3327 5409 6.540438 ACTTTGTATGGTCCTCGAGAATAA 57.460 37.500 15.71 0.00 0.00 1.40
3328 5410 7.125792 ACTTTGTATGGTCCTCGAGAATAAT 57.874 36.000 15.71 5.00 0.00 1.28
3329 5411 7.210873 ACTTTGTATGGTCCTCGAGAATAATC 58.789 38.462 15.71 0.00 0.00 1.75
3330 5412 6.724893 TTGTATGGTCCTCGAGAATAATCA 57.275 37.500 15.71 3.23 0.00 2.57
3331 5413 6.724893 TGTATGGTCCTCGAGAATAATCAA 57.275 37.500 15.71 0.00 0.00 2.57
3332 5414 7.303182 TGTATGGTCCTCGAGAATAATCAAT 57.697 36.000 15.71 0.00 0.00 2.57
3333 5415 8.417273 TGTATGGTCCTCGAGAATAATCAATA 57.583 34.615 15.71 0.00 0.00 1.90
3334 5416 8.866093 TGTATGGTCCTCGAGAATAATCAATAA 58.134 33.333 15.71 0.00 0.00 1.40
3335 5417 9.706691 GTATGGTCCTCGAGAATAATCAATAAA 57.293 33.333 15.71 0.00 0.00 1.40
3336 5418 8.839310 ATGGTCCTCGAGAATAATCAATAAAG 57.161 34.615 15.71 0.00 0.00 1.85
3337 5419 7.792032 TGGTCCTCGAGAATAATCAATAAAGT 58.208 34.615 15.71 0.00 0.00 2.66
3338 5420 7.710907 TGGTCCTCGAGAATAATCAATAAAGTG 59.289 37.037 15.71 0.00 0.00 3.16
3339 5421 7.171678 GGTCCTCGAGAATAATCAATAAAGTGG 59.828 40.741 15.71 0.00 0.00 4.00
3340 5422 6.706270 TCCTCGAGAATAATCAATAAAGTGGC 59.294 38.462 15.71 0.00 0.00 5.01
3341 5423 6.073003 CCTCGAGAATAATCAATAAAGTGGCC 60.073 42.308 15.71 0.00 0.00 5.36
3342 5424 5.465390 TCGAGAATAATCAATAAAGTGGCCG 59.535 40.000 0.00 0.00 0.00 6.13
3343 5425 5.236478 CGAGAATAATCAATAAAGTGGCCGT 59.764 40.000 0.00 0.00 0.00 5.68
3344 5426 6.422701 CGAGAATAATCAATAAAGTGGCCGTA 59.577 38.462 0.00 0.00 0.00 4.02
3345 5427 7.117812 CGAGAATAATCAATAAAGTGGCCGTAT 59.882 37.037 0.00 0.00 0.00 3.06
3346 5428 8.099364 AGAATAATCAATAAAGTGGCCGTATG 57.901 34.615 0.00 0.00 0.00 2.39
3347 5429 4.568152 AATCAATAAAGTGGCCGTATGC 57.432 40.909 0.00 0.00 40.16 3.14
3348 5430 2.992593 TCAATAAAGTGGCCGTATGCA 58.007 42.857 0.00 0.00 43.89 3.96
3349 5431 3.550820 TCAATAAAGTGGCCGTATGCAT 58.449 40.909 3.79 3.79 43.89 3.96
3350 5432 3.563808 TCAATAAAGTGGCCGTATGCATC 59.436 43.478 0.19 0.00 43.89 3.91
3351 5433 3.492102 ATAAAGTGGCCGTATGCATCT 57.508 42.857 0.19 0.00 43.89 2.90
3352 5434 1.668419 AAAGTGGCCGTATGCATCTC 58.332 50.000 0.19 0.00 43.89 2.75
3353 5435 0.179045 AAGTGGCCGTATGCATCTCC 60.179 55.000 0.19 0.71 43.89 3.71
3354 5436 1.598130 GTGGCCGTATGCATCTCCC 60.598 63.158 0.19 0.17 43.89 4.30
3355 5437 2.069430 TGGCCGTATGCATCTCCCA 61.069 57.895 0.19 3.16 43.89 4.37
3356 5438 1.302033 GGCCGTATGCATCTCCCAG 60.302 63.158 0.19 0.00 43.89 4.45
3357 5439 1.748403 GCCGTATGCATCTCCCAGA 59.252 57.895 0.19 0.00 40.77 3.86
3358 5440 0.322975 GCCGTATGCATCTCCCAGAT 59.677 55.000 0.19 0.00 40.77 2.90
3366 5448 0.250381 CATCTCCCAGATGCAGAGGC 60.250 60.000 0.61 0.00 44.69 4.70
3367 5449 1.417288 ATCTCCCAGATGCAGAGGCC 61.417 60.000 0.00 0.00 40.13 5.19
3368 5450 3.457625 CTCCCAGATGCAGAGGCCG 62.458 68.421 0.00 0.00 40.13 6.13
3369 5451 4.559063 CCCAGATGCAGAGGCCGG 62.559 72.222 0.00 0.00 40.13 6.13
3370 5452 4.559063 CCAGATGCAGAGGCCGGG 62.559 72.222 2.18 0.00 40.13 5.73
3371 5453 4.559063 CAGATGCAGAGGCCGGGG 62.559 72.222 2.18 0.00 40.13 5.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
10 11 6.966021 TGCTCTTTGAAAATGTGGTTAGTAC 58.034 36.000 0.00 0.00 0.00 2.73
14 15 4.340666 TGCTGCTCTTTGAAAATGTGGTTA 59.659 37.500 0.00 0.00 0.00 2.85
19 20 4.859304 TGATGCTGCTCTTTGAAAATGT 57.141 36.364 0.00 0.00 0.00 2.71
21 22 5.916661 AGATGATGCTGCTCTTTGAAAAT 57.083 34.783 0.00 0.00 0.00 1.82
29 30 9.033711 TCTTTTATATCTAGATGATGCTGCTCT 57.966 33.333 15.79 0.00 36.65 4.09
30 31 9.820725 ATCTTTTATATCTAGATGATGCTGCTC 57.179 33.333 15.79 0.00 36.65 4.26
50 51 4.708421 CCATGATTGTGGTCCTCATCTTTT 59.292 41.667 0.00 0.00 34.46 2.27
77 78 1.783250 AAGGAGAGCAAGGGTGTGGG 61.783 60.000 0.00 0.00 0.00 4.61
80 81 0.109342 CACAAGGAGAGCAAGGGTGT 59.891 55.000 0.00 0.00 0.00 4.16
90 91 4.332683 ACCTACTACCATCACAAGGAGA 57.667 45.455 0.00 0.00 0.00 3.71
96 97 6.629515 GCAAATGAGTACCTACTACCATCACA 60.630 42.308 0.00 0.00 36.50 3.58
104 105 6.406961 CCACATGAGCAAATGAGTACCTACTA 60.407 42.308 0.00 0.00 36.50 1.82
107 108 4.469586 TCCACATGAGCAAATGAGTACCTA 59.530 41.667 0.00 0.00 0.00 3.08
146 147 9.809395 ACATCAATATTTCTGATCTTGGATGAT 57.191 29.630 0.00 0.00 30.99 2.45
186 187 6.238103 CCTGTTCACGCAAAATAGTACCATAG 60.238 42.308 0.00 0.00 0.00 2.23
205 206 1.187567 AAAGCATGCACCCCCTGTTC 61.188 55.000 21.98 0.00 0.00 3.18
211 212 1.593265 CTTCCAAAGCATGCACCCC 59.407 57.895 21.98 0.00 0.00 4.95
247 248 1.140312 ACAACTGGGGTCATCACACT 58.860 50.000 0.00 0.00 0.00 3.55
373 721 4.464947 TGGTCATACAACACCACAATGAA 58.535 39.130 0.00 0.00 37.78 2.57
378 759 2.038426 CTCCTGGTCATACAACACCACA 59.962 50.000 0.00 0.00 37.78 4.17
415 796 7.753309 TGAATAGACCGGAAATTTTCTCAAA 57.247 32.000 9.46 0.00 0.00 2.69
416 797 7.609918 TGATGAATAGACCGGAAATTTTCTCAA 59.390 33.333 9.46 0.00 0.00 3.02
425 806 5.128663 TGACAGATGATGAATAGACCGGAAA 59.871 40.000 9.46 0.00 0.00 3.13
602 2567 1.961793 AACAAGGTTGCGCACTCTTA 58.038 45.000 11.12 0.00 0.00 2.10
605 2570 0.317854 GGAAACAAGGTTGCGCACTC 60.318 55.000 11.12 6.38 0.00 3.51
842 2820 7.709182 GCTTTGAAAATAATATGGGGTTGTACC 59.291 37.037 0.00 0.00 37.60 3.34
843 2821 8.254508 TGCTTTGAAAATAATATGGGGTTGTAC 58.745 33.333 0.00 0.00 0.00 2.90
844 2822 8.367660 TGCTTTGAAAATAATATGGGGTTGTA 57.632 30.769 0.00 0.00 0.00 2.41
845 2823 7.251321 TGCTTTGAAAATAATATGGGGTTGT 57.749 32.000 0.00 0.00 0.00 3.32
846 2824 7.605691 TGTTGCTTTGAAAATAATATGGGGTTG 59.394 33.333 0.00 0.00 0.00 3.77
847 2825 7.684529 TGTTGCTTTGAAAATAATATGGGGTT 58.315 30.769 0.00 0.00 0.00 4.11
848 2826 7.251321 TGTTGCTTTGAAAATAATATGGGGT 57.749 32.000 0.00 0.00 0.00 4.95
849 2827 7.065683 GGTTGTTGCTTTGAAAATAATATGGGG 59.934 37.037 0.00 0.00 0.00 4.96
850 2828 7.065683 GGGTTGTTGCTTTGAAAATAATATGGG 59.934 37.037 0.00 0.00 0.00 4.00
851 2829 7.605691 TGGGTTGTTGCTTTGAAAATAATATGG 59.394 33.333 0.00 0.00 0.00 2.74
852 2830 8.545229 TGGGTTGTTGCTTTGAAAATAATATG 57.455 30.769 0.00 0.00 0.00 1.78
853 2831 9.165035 CATGGGTTGTTGCTTTGAAAATAATAT 57.835 29.630 0.00 0.00 0.00 1.28
854 2832 8.153550 ACATGGGTTGTTGCTTTGAAAATAATA 58.846 29.630 0.00 0.00 33.74 0.98
855 2833 6.997476 ACATGGGTTGTTGCTTTGAAAATAAT 59.003 30.769 0.00 0.00 33.74 1.28
856 2834 6.352516 ACATGGGTTGTTGCTTTGAAAATAA 58.647 32.000 0.00 0.00 33.74 1.40
857 2835 5.923204 ACATGGGTTGTTGCTTTGAAAATA 58.077 33.333 0.00 0.00 33.74 1.40
858 2836 4.779696 ACATGGGTTGTTGCTTTGAAAAT 58.220 34.783 0.00 0.00 33.74 1.82
859 2837 4.213564 ACATGGGTTGTTGCTTTGAAAA 57.786 36.364 0.00 0.00 33.74 2.29
860 2838 3.902881 ACATGGGTTGTTGCTTTGAAA 57.097 38.095 0.00 0.00 33.74 2.69
861 2839 3.902881 AACATGGGTTGTTGCTTTGAA 57.097 38.095 0.00 0.00 46.80 2.69
909 2887 4.284490 TGGTCCAATAGTCTGATAGGCATC 59.716 45.833 0.00 0.00 0.00 3.91
919 2897 1.898863 AGGGCATGGTCCAATAGTCT 58.101 50.000 0.00 0.00 0.00 3.24
971 2949 2.260088 TAAGGTACGCATGGTGGGCC 62.260 60.000 0.00 0.00 33.10 5.80
989 2967 7.703621 GTCTTGTTTCTATTGTACTACCGCATA 59.296 37.037 0.00 0.00 0.00 3.14
1013 2991 1.577328 CCCTTGTGCCGTGTCATGTC 61.577 60.000 0.00 0.00 0.00 3.06
1029 3007 1.136329 AATCTGGCTGGTCACACCCT 61.136 55.000 0.00 0.00 37.50 4.34
1090 3075 2.550101 GCTCATGATCGGCCAAGGC 61.550 63.158 2.24 1.52 41.06 4.35
1091 3076 1.895707 GGCTCATGATCGGCCAAGG 60.896 63.158 17.28 0.00 44.69 3.61
1092 3077 2.249535 CGGCTCATGATCGGCCAAG 61.250 63.158 20.77 5.41 45.50 3.61
1093 3078 2.203056 CGGCTCATGATCGGCCAA 60.203 61.111 20.77 0.00 45.50 4.52
1094 3079 3.469970 ACGGCTCATGATCGGCCA 61.470 61.111 20.77 0.00 45.50 5.36
1095 3080 2.969238 CACGGCTCATGATCGGCC 60.969 66.667 13.22 13.22 42.18 6.13
1191 3176 1.593787 CAGGCCTTCTGCTCTTCGA 59.406 57.895 0.00 0.00 40.92 3.71
1279 3266 2.100603 CGAGTCTTCTCCGTCGCC 59.899 66.667 0.00 0.00 37.40 5.54
1283 3270 1.587933 GGCAGACGAGTCTTCTCCGT 61.588 60.000 2.55 0.00 37.98 4.69
1332 3319 1.110442 CCGCCCATTGAAGCCAATTA 58.890 50.000 0.00 0.00 40.81 1.40
1335 3322 1.976474 GTCCGCCCATTGAAGCCAA 60.976 57.895 0.00 0.00 36.61 4.52
1336 3323 2.361104 GTCCGCCCATTGAAGCCA 60.361 61.111 0.00 0.00 0.00 4.75
1347 3334 1.144057 ATGAACTCCATCGTCCGCC 59.856 57.895 0.00 0.00 0.00 6.13
1348 3335 1.766143 GCATGAACTCCATCGTCCGC 61.766 60.000 0.00 0.00 31.94 5.54
1435 3422 1.814586 CGAGGCGAGGTCGTAGAGT 60.815 63.158 0.69 0.00 42.22 3.24
1579 3566 0.929244 CCTCCATGGGGTTCTTGGAT 59.071 55.000 11.67 0.00 45.18 3.41
1685 3673 1.613925 GCTGACTATGTCGCAGGGATA 59.386 52.381 0.00 0.00 34.95 2.59
1774 3762 2.494445 CATGCGCGGGTCTCTGTA 59.506 61.111 8.83 0.00 0.00 2.74
1777 3765 3.842923 CTCCATGCGCGGGTCTCT 61.843 66.667 16.40 0.00 0.00 3.10
2034 4022 2.360350 CACAGAAGCGGCCACCAT 60.360 61.111 2.24 0.00 0.00 3.55
2085 4073 4.899239 GCTCGACCTCCATGCCGG 62.899 72.222 0.00 0.00 0.00 6.13
2153 4141 1.144969 TCAAAGCAGTTTCCGCGTAG 58.855 50.000 4.92 0.00 0.00 3.51
2158 4146 1.270550 AGGCATTCAAAGCAGTTTCCG 59.729 47.619 0.00 0.00 0.00 4.30
2161 4149 1.690352 AGCAGGCATTCAAAGCAGTTT 59.310 42.857 0.00 0.00 0.00 2.66
2191 4182 4.458295 GGGCCAATATCATCATCAACTCAG 59.542 45.833 4.39 0.00 0.00 3.35
2194 4185 4.736611 AGGGCCAATATCATCATCAACT 57.263 40.909 6.18 0.00 0.00 3.16
2196 4187 5.951204 TGTTAGGGCCAATATCATCATCAA 58.049 37.500 6.18 0.00 0.00 2.57
2199 4190 5.895807 ACATGTTAGGGCCAATATCATCAT 58.104 37.500 6.18 0.00 0.00 2.45
2209 4200 4.046286 AGAATCAAACATGTTAGGGCCA 57.954 40.909 12.39 0.00 0.00 5.36
2211 4202 6.759497 AAGTAGAATCAAACATGTTAGGGC 57.241 37.500 12.39 1.12 0.00 5.19
2306 4306 3.066760 CCTCACAAGACAAAGGGTGAAAC 59.933 47.826 0.00 0.00 39.53 2.78
2324 4324 1.144691 TGTGGGAATGTTCACCCTCA 58.855 50.000 0.00 0.00 45.74 3.86
2330 4330 4.567537 CCTCTATTGGTGTGGGAATGTTCA 60.568 45.833 0.00 0.00 0.00 3.18
2335 4335 5.014755 TGTTAACCTCTATTGGTGTGGGAAT 59.985 40.000 2.48 0.00 40.73 3.01
2340 4340 5.768164 ACCTTTGTTAACCTCTATTGGTGTG 59.232 40.000 2.48 0.00 40.73 3.82
2345 4345 8.050778 TGCATTACCTTTGTTAACCTCTATTG 57.949 34.615 2.48 0.00 0.00 1.90
2350 4350 6.589907 CCAAATGCATTACCTTTGTTAACCTC 59.410 38.462 13.39 0.00 0.00 3.85
2352 4352 5.641636 CCCAAATGCATTACCTTTGTTAACC 59.358 40.000 13.39 0.00 0.00 2.85
2353 4353 5.121611 GCCCAAATGCATTACCTTTGTTAAC 59.878 40.000 13.39 0.00 0.00 2.01
2354 4354 5.012561 AGCCCAAATGCATTACCTTTGTTAA 59.987 36.000 13.39 0.00 0.00 2.01
2359 4359 3.444029 AGAGCCCAAATGCATTACCTTT 58.556 40.909 13.39 0.00 0.00 3.11
2362 4362 5.535753 AATAAGAGCCCAAATGCATTACC 57.464 39.130 13.39 1.58 0.00 2.85
2369 4369 7.156876 TGTGTTTCTAATAAGAGCCCAAATG 57.843 36.000 0.00 0.00 31.96 2.32
2370 4370 7.961326 ATGTGTTTCTAATAAGAGCCCAAAT 57.039 32.000 0.00 0.00 31.96 2.32
2382 4382 8.721478 GTGTCTACATGTGAATGTGTTTCTAAT 58.279 33.333 9.11 0.00 36.08 1.73
2409 4409 5.739959 AGTGTATGCACCATGTACATGTAA 58.260 37.500 29.25 14.94 46.35 2.41
2437 4441 5.447279 GGGTGTGCTTTTGTCGTCAATATAG 60.447 44.000 0.00 0.00 33.32 1.31
2438 4442 4.393680 GGGTGTGCTTTTGTCGTCAATATA 59.606 41.667 0.00 0.00 33.32 0.86
2445 4449 2.561478 ATAGGGTGTGCTTTTGTCGT 57.439 45.000 0.00 0.00 0.00 4.34
2456 4460 4.038883 GGCGTACTCATAGAAATAGGGTGT 59.961 45.833 0.00 0.00 0.00 4.16
2458 4462 3.577415 GGGCGTACTCATAGAAATAGGGT 59.423 47.826 0.00 0.00 0.00 4.34
2478 4482 3.485463 TTACAAGATCGGCCTATTGGG 57.515 47.619 0.00 0.00 38.36 4.12
2483 4487 6.411376 TCTCAAATTTTACAAGATCGGCCTA 58.589 36.000 0.00 0.00 0.00 3.93
2486 4490 7.218963 GTCAATCTCAAATTTTACAAGATCGGC 59.781 37.037 0.00 0.00 0.00 5.54
2487 4491 7.426456 CGTCAATCTCAAATTTTACAAGATCGG 59.574 37.037 0.00 0.00 0.00 4.18
2488 4492 8.168626 TCGTCAATCTCAAATTTTACAAGATCG 58.831 33.333 0.00 0.00 0.00 3.69
2489 4493 9.825972 TTCGTCAATCTCAAATTTTACAAGATC 57.174 29.630 0.00 0.00 0.00 2.75
2512 4519 2.516923 GAGGTGTGTATGACGACTTCG 58.483 52.381 0.00 0.00 46.33 3.79
2541 4548 1.219522 GGTCCAGGACAACGTGTTCG 61.220 60.000 21.75 0.00 37.41 3.95
2542 4549 1.219522 CGGTCCAGGACAACGTGTTC 61.220 60.000 21.75 0.05 33.68 3.18
2548 4555 0.535335 TGCTATCGGTCCAGGACAAC 59.465 55.000 21.75 3.82 33.68 3.32
2550 4557 1.138859 CAATGCTATCGGTCCAGGACA 59.861 52.381 21.75 1.56 33.68 4.02
2555 4562 3.576078 ATTTCCAATGCTATCGGTCCA 57.424 42.857 0.00 0.00 0.00 4.02
2557 4564 4.499696 CCCAAATTTCCAATGCTATCGGTC 60.500 45.833 0.00 0.00 0.00 4.79
2559 4566 3.636300 TCCCAAATTTCCAATGCTATCGG 59.364 43.478 0.00 0.00 0.00 4.18
2560 4567 4.916983 TCCCAAATTTCCAATGCTATCG 57.083 40.909 0.00 0.00 0.00 2.92
2561 4568 8.424133 ACTTATTCCCAAATTTCCAATGCTATC 58.576 33.333 0.00 0.00 0.00 2.08
2568 4575 7.610580 ACTGAACTTATTCCCAAATTTCCAA 57.389 32.000 0.00 0.00 33.49 3.53
2569 4576 7.610580 AACTGAACTTATTCCCAAATTTCCA 57.389 32.000 0.00 0.00 33.49 3.53
2586 4594 7.492614 CATCGGTGCTTAAATTTAACTGAAC 57.507 36.000 12.02 6.86 0.00 3.18
2604 4612 4.588951 TCAAGTTCTAGATATGGCATCGGT 59.411 41.667 1.65 0.00 0.00 4.69
2606 4614 5.406780 GGTTCAAGTTCTAGATATGGCATCG 59.593 44.000 1.65 0.00 0.00 3.84
2608 4616 5.625150 GGGTTCAAGTTCTAGATATGGCAT 58.375 41.667 4.88 4.88 0.00 4.40
2610 4618 4.058817 CGGGTTCAAGTTCTAGATATGGC 58.941 47.826 0.00 0.00 0.00 4.40
2611 4619 4.503296 CCCGGGTTCAAGTTCTAGATATGG 60.503 50.000 14.18 0.00 0.00 2.74
2612 4620 4.101119 ACCCGGGTTCAAGTTCTAGATATG 59.899 45.833 24.16 0.00 0.00 1.78
2613 4621 4.296056 ACCCGGGTTCAAGTTCTAGATAT 58.704 43.478 24.16 0.00 0.00 1.63
2614 4622 3.716431 ACCCGGGTTCAAGTTCTAGATA 58.284 45.455 24.16 0.00 0.00 1.98
2615 4623 2.547990 ACCCGGGTTCAAGTTCTAGAT 58.452 47.619 24.16 0.00 0.00 1.98
2616 4624 2.019807 ACCCGGGTTCAAGTTCTAGA 57.980 50.000 24.16 0.00 0.00 2.43
2617 4625 3.260128 ACTTACCCGGGTTCAAGTTCTAG 59.740 47.826 35.42 16.29 0.00 2.43
2618 4626 3.242011 ACTTACCCGGGTTCAAGTTCTA 58.758 45.455 35.42 7.27 0.00 2.10
2631 4639 6.652062 ACTTTGTATTGAAACCTACTTACCCG 59.348 38.462 0.00 0.00 0.00 5.28
2671 4679 7.714377 CCAAATCTATTAGTGAACAGAGCTCAT 59.286 37.037 17.77 0.00 0.00 2.90
2676 4684 7.607991 ACAACCCAAATCTATTAGTGAACAGAG 59.392 37.037 0.00 0.00 0.00 3.35
2679 4687 7.721842 TGAACAACCCAAATCTATTAGTGAACA 59.278 33.333 0.00 0.00 0.00 3.18
2691 4699 2.562298 TCCAGCATGAACAACCCAAATC 59.438 45.455 0.00 0.00 39.69 2.17
2813 4822 5.006649 GCCAACAAAAGAAGAAATCCACAAC 59.993 40.000 0.00 0.00 0.00 3.32
2816 4825 3.735746 CGCCAACAAAAGAAGAAATCCAC 59.264 43.478 0.00 0.00 0.00 4.02
2820 4829 4.918810 ACTCGCCAACAAAAGAAGAAAT 57.081 36.364 0.00 0.00 0.00 2.17
2821 4830 4.712122 AACTCGCCAACAAAAGAAGAAA 57.288 36.364 0.00 0.00 0.00 2.52
2833 4842 3.625764 GGCTATATGACAAAACTCGCCAA 59.374 43.478 0.00 0.00 35.23 4.52
2867 4876 1.582968 GTTGCCCACATCAGCACAG 59.417 57.895 0.00 0.00 39.10 3.66
2874 4883 0.169009 GCTCTTTCGTTGCCCACATC 59.831 55.000 0.00 0.00 0.00 3.06
2878 4887 1.896660 GTGGCTCTTTCGTTGCCCA 60.897 57.895 0.00 0.00 45.56 5.36
2905 4915 7.488471 ACTGTAGTACAATTGATTAAGACGCTC 59.512 37.037 13.59 0.00 0.00 5.03
2929 4939 9.953565 TGCTAACTTGTATATTTTTGGTCTACT 57.046 29.630 0.00 0.00 0.00 2.57
2963 5045 3.814842 TGTGAAACAGTAGCCAAGTCATG 59.185 43.478 0.00 0.00 45.67 3.07
2965 5047 3.552132 TGTGAAACAGTAGCCAAGTCA 57.448 42.857 0.00 0.00 45.67 3.41
3016 5098 2.813179 GCCATCGACGTCACCATGC 61.813 63.158 17.16 7.31 0.00 4.06
3017 5099 1.423721 CTGCCATCGACGTCACCATG 61.424 60.000 17.16 13.34 0.00 3.66
3018 5100 1.153568 CTGCCATCGACGTCACCAT 60.154 57.895 17.16 0.84 0.00 3.55
3019 5101 2.212900 CTCTGCCATCGACGTCACCA 62.213 60.000 17.16 0.00 0.00 4.17
3020 5102 1.517257 CTCTGCCATCGACGTCACC 60.517 63.158 17.16 0.00 0.00 4.02
3021 5103 1.073216 CACTCTGCCATCGACGTCAC 61.073 60.000 17.16 0.00 0.00 3.67
3022 5104 1.212751 CACTCTGCCATCGACGTCA 59.787 57.895 17.16 3.13 0.00 4.35
3023 5105 0.798771 GTCACTCTGCCATCGACGTC 60.799 60.000 5.18 5.18 0.00 4.34
3024 5106 1.213013 GTCACTCTGCCATCGACGT 59.787 57.895 0.00 0.00 0.00 4.34
3025 5107 1.517257 GGTCACTCTGCCATCGACG 60.517 63.158 0.00 0.00 0.00 5.12
3026 5108 0.037326 TTGGTCACTCTGCCATCGAC 60.037 55.000 0.00 0.00 34.37 4.20
3027 5109 0.684535 TTTGGTCACTCTGCCATCGA 59.315 50.000 0.00 0.00 34.37 3.59
3028 5110 0.798776 GTTTGGTCACTCTGCCATCG 59.201 55.000 0.00 0.00 34.37 3.84
3029 5111 1.896220 TGTTTGGTCACTCTGCCATC 58.104 50.000 0.00 0.00 34.37 3.51
3030 5112 2.233271 CTTGTTTGGTCACTCTGCCAT 58.767 47.619 0.00 0.00 34.37 4.40
3031 5113 1.679139 CTTGTTTGGTCACTCTGCCA 58.321 50.000 0.00 0.00 0.00 4.92
3032 5114 0.954452 CCTTGTTTGGTCACTCTGCC 59.046 55.000 0.00 0.00 0.00 4.85
3033 5115 1.680338 ACCTTGTTTGGTCACTCTGC 58.320 50.000 0.00 0.00 34.86 4.26
3034 5116 4.336889 TCTACCTTGTTTGGTCACTCTG 57.663 45.455 0.00 0.00 41.22 3.35
3035 5117 4.743955 GCTTCTACCTTGTTTGGTCACTCT 60.744 45.833 0.00 0.00 41.22 3.24
3036 5118 3.498777 GCTTCTACCTTGTTTGGTCACTC 59.501 47.826 0.00 0.00 41.22 3.51
3037 5119 3.477530 GCTTCTACCTTGTTTGGTCACT 58.522 45.455 0.00 0.00 41.22 3.41
3038 5120 2.552743 GGCTTCTACCTTGTTTGGTCAC 59.447 50.000 0.00 0.00 41.22 3.67
3039 5121 2.441750 AGGCTTCTACCTTGTTTGGTCA 59.558 45.455 0.00 0.00 41.22 4.02
3040 5122 3.075148 GAGGCTTCTACCTTGTTTGGTC 58.925 50.000 0.00 0.00 41.32 4.02
3041 5123 2.441750 TGAGGCTTCTACCTTGTTTGGT 59.558 45.455 0.00 0.00 41.32 3.67
3042 5124 3.140325 TGAGGCTTCTACCTTGTTTGG 57.860 47.619 0.00 0.00 41.32 3.28
3043 5125 6.599244 TCATATTGAGGCTTCTACCTTGTTTG 59.401 38.462 0.00 0.00 41.32 2.93
3044 5126 6.721318 TCATATTGAGGCTTCTACCTTGTTT 58.279 36.000 0.00 0.00 41.32 2.83
3045 5127 6.313519 TCATATTGAGGCTTCTACCTTGTT 57.686 37.500 0.00 0.00 41.32 2.83
3046 5128 5.957771 TCATATTGAGGCTTCTACCTTGT 57.042 39.130 0.00 0.00 41.32 3.16
3047 5129 6.649973 CAGATCATATTGAGGCTTCTACCTTG 59.350 42.308 0.00 0.00 41.32 3.61
3048 5130 6.556495 TCAGATCATATTGAGGCTTCTACCTT 59.444 38.462 0.00 0.00 41.32 3.50
3049 5131 6.080682 TCAGATCATATTGAGGCTTCTACCT 58.919 40.000 0.00 0.00 45.04 3.08
3050 5132 6.352016 TCAGATCATATTGAGGCTTCTACC 57.648 41.667 0.00 0.00 0.00 3.18
3051 5133 7.598493 GTCTTCAGATCATATTGAGGCTTCTAC 59.402 40.741 0.00 0.00 0.00 2.59
3052 5134 7.256119 GGTCTTCAGATCATATTGAGGCTTCTA 60.256 40.741 0.00 0.00 0.00 2.10
3053 5135 6.464180 GGTCTTCAGATCATATTGAGGCTTCT 60.464 42.308 0.00 0.00 0.00 2.85
3054 5136 5.700373 GGTCTTCAGATCATATTGAGGCTTC 59.300 44.000 0.00 0.00 0.00 3.86
3055 5137 5.369110 AGGTCTTCAGATCATATTGAGGCTT 59.631 40.000 0.00 0.00 0.00 4.35
3056 5138 4.906664 AGGTCTTCAGATCATATTGAGGCT 59.093 41.667 0.00 0.00 0.00 4.58
3057 5139 4.996122 CAGGTCTTCAGATCATATTGAGGC 59.004 45.833 0.00 0.00 0.00 4.70
3058 5140 5.990386 CACAGGTCTTCAGATCATATTGAGG 59.010 44.000 0.00 0.00 0.00 3.86
3059 5141 5.990386 CCACAGGTCTTCAGATCATATTGAG 59.010 44.000 0.00 0.00 0.00 3.02
3060 5142 5.662657 TCCACAGGTCTTCAGATCATATTGA 59.337 40.000 0.00 0.00 0.00 2.57
3061 5143 5.922053 TCCACAGGTCTTCAGATCATATTG 58.078 41.667 0.00 0.00 0.00 1.90
3062 5144 6.385176 TCTTCCACAGGTCTTCAGATCATATT 59.615 38.462 0.00 0.00 0.00 1.28
3063 5145 5.901853 TCTTCCACAGGTCTTCAGATCATAT 59.098 40.000 0.00 0.00 0.00 1.78
3064 5146 5.272402 TCTTCCACAGGTCTTCAGATCATA 58.728 41.667 0.00 0.00 0.00 2.15
3065 5147 4.099633 TCTTCCACAGGTCTTCAGATCAT 58.900 43.478 0.00 0.00 0.00 2.45
3066 5148 3.510459 TCTTCCACAGGTCTTCAGATCA 58.490 45.455 0.00 0.00 0.00 2.92
3067 5149 4.440880 CATCTTCCACAGGTCTTCAGATC 58.559 47.826 0.00 0.00 0.00 2.75
3068 5150 3.199508 CCATCTTCCACAGGTCTTCAGAT 59.800 47.826 0.00 0.00 0.00 2.90
3069 5151 2.568956 CCATCTTCCACAGGTCTTCAGA 59.431 50.000 0.00 0.00 0.00 3.27
3070 5152 2.304180 ACCATCTTCCACAGGTCTTCAG 59.696 50.000 0.00 0.00 0.00 3.02
3071 5153 2.038952 CACCATCTTCCACAGGTCTTCA 59.961 50.000 0.00 0.00 30.44 3.02
3072 5154 2.616510 CCACCATCTTCCACAGGTCTTC 60.617 54.545 0.00 0.00 30.44 2.87
3073 5155 1.352352 CCACCATCTTCCACAGGTCTT 59.648 52.381 0.00 0.00 30.44 3.01
3074 5156 0.987294 CCACCATCTTCCACAGGTCT 59.013 55.000 0.00 0.00 30.44 3.85
3075 5157 0.678048 GCCACCATCTTCCACAGGTC 60.678 60.000 0.00 0.00 30.44 3.85
3076 5158 1.380302 GCCACCATCTTCCACAGGT 59.620 57.895 0.00 0.00 33.91 4.00
3077 5159 1.746615 CGCCACCATCTTCCACAGG 60.747 63.158 0.00 0.00 0.00 4.00
3078 5160 1.021390 GTCGCCACCATCTTCCACAG 61.021 60.000 0.00 0.00 0.00 3.66
3079 5161 1.003839 GTCGCCACCATCTTCCACA 60.004 57.895 0.00 0.00 0.00 4.17
3080 5162 2.100631 CGTCGCCACCATCTTCCAC 61.101 63.158 0.00 0.00 0.00 4.02
3081 5163 2.264480 CGTCGCCACCATCTTCCA 59.736 61.111 0.00 0.00 0.00 3.53
3082 5164 1.810030 GTCGTCGCCACCATCTTCC 60.810 63.158 0.00 0.00 0.00 3.46
3083 5165 1.080093 TGTCGTCGCCACCATCTTC 60.080 57.895 0.00 0.00 0.00 2.87
3084 5166 1.374252 GTGTCGTCGCCACCATCTT 60.374 57.895 0.00 0.00 0.00 2.40
3085 5167 2.261671 GTGTCGTCGCCACCATCT 59.738 61.111 0.00 0.00 0.00 2.90
3086 5168 2.048597 TGTGTCGTCGCCACCATC 60.049 61.111 3.68 0.00 31.71 3.51
3087 5169 2.357034 GTGTGTCGTCGCCACCAT 60.357 61.111 3.68 0.00 31.71 3.55
3088 5170 4.934942 CGTGTGTCGTCGCCACCA 62.935 66.667 3.68 0.00 34.52 4.17
3089 5171 4.634133 TCGTGTGTCGTCGCCACC 62.634 66.667 3.68 0.00 40.80 4.61
3090 5172 3.097728 CTCGTGTGTCGTCGCCAC 61.098 66.667 0.00 0.00 40.80 5.01
3091 5173 3.588906 ACTCGTGTGTCGTCGCCA 61.589 61.111 0.00 0.00 40.80 5.69
3092 5174 3.097728 CACTCGTGTGTCGTCGCC 61.098 66.667 9.42 0.00 39.24 5.54
3093 5175 3.753539 GCACTCGTGTGTCGTCGC 61.754 66.667 18.01 0.00 45.44 5.19
3094 5176 3.450152 CGCACTCGTGTGTCGTCG 61.450 66.667 18.01 9.68 45.44 5.12
3104 5186 2.543687 AATCCGGTCAGACGCACTCG 62.544 60.000 0.00 0.00 42.43 4.18
3105 5187 1.078759 CAATCCGGTCAGACGCACTC 61.079 60.000 0.00 0.00 0.00 3.51
3106 5188 1.079819 CAATCCGGTCAGACGCACT 60.080 57.895 0.00 0.00 0.00 4.40
3107 5189 1.374252 ACAATCCGGTCAGACGCAC 60.374 57.895 0.00 0.00 0.00 5.34
3108 5190 1.374125 CACAATCCGGTCAGACGCA 60.374 57.895 0.00 0.00 0.00 5.24
3109 5191 2.740714 GCACAATCCGGTCAGACGC 61.741 63.158 0.00 0.00 0.00 5.19
3110 5192 2.100631 GGCACAATCCGGTCAGACG 61.101 63.158 0.00 0.00 0.00 4.18
3111 5193 1.745489 GGGCACAATCCGGTCAGAC 60.745 63.158 0.00 0.00 0.00 3.51
3112 5194 2.668632 GGGCACAATCCGGTCAGA 59.331 61.111 0.00 0.00 0.00 3.27
3113 5195 2.438434 GGGGCACAATCCGGTCAG 60.438 66.667 0.00 0.00 0.00 3.51
3114 5196 3.253061 TGGGGCACAATCCGGTCA 61.253 61.111 0.00 0.00 0.00 4.02
3115 5197 2.438434 CTGGGGCACAATCCGGTC 60.438 66.667 0.00 0.00 0.00 4.79
3116 5198 2.933287 TCTGGGGCACAATCCGGT 60.933 61.111 0.00 0.00 0.00 5.28
3117 5199 2.438434 GTCTGGGGCACAATCCGG 60.438 66.667 0.00 0.00 0.00 5.14
3118 5200 2.438434 GGTCTGGGGCACAATCCG 60.438 66.667 0.00 0.00 0.00 4.18
3119 5201 2.043953 GGGTCTGGGGCACAATCC 60.044 66.667 0.00 0.00 0.00 3.01
3120 5202 1.379044 CAGGGTCTGGGGCACAATC 60.379 63.158 0.00 0.00 0.00 2.67
3121 5203 0.844661 TACAGGGTCTGGGGCACAAT 60.845 55.000 0.00 0.00 35.51 2.71
3122 5204 0.844661 ATACAGGGTCTGGGGCACAA 60.845 55.000 0.00 0.00 35.51 3.33
3123 5205 1.229820 ATACAGGGTCTGGGGCACA 60.230 57.895 0.00 0.00 35.51 4.57
3124 5206 1.224592 CATACAGGGTCTGGGGCAC 59.775 63.158 0.00 0.00 35.51 5.01
3125 5207 1.229820 ACATACAGGGTCTGGGGCA 60.230 57.895 0.00 0.00 35.51 5.36
3126 5208 1.224592 CACATACAGGGTCTGGGGC 59.775 63.158 0.00 0.00 35.51 5.80
3127 5209 1.915228 CCACATACAGGGTCTGGGG 59.085 63.158 0.00 0.00 35.51 4.96
3128 5210 1.224592 GCCACATACAGGGTCTGGG 59.775 63.158 0.00 0.00 35.51 4.45
3129 5211 2.300996 AGCCACATACAGGGTCTGG 58.699 57.895 0.00 0.00 35.51 3.86
3133 5215 3.031417 GCCGAGCCACATACAGGGT 62.031 63.158 0.00 0.00 40.09 4.34
3134 5216 2.203070 GCCGAGCCACATACAGGG 60.203 66.667 0.00 0.00 0.00 4.45
3135 5217 1.522355 CAGCCGAGCCACATACAGG 60.522 63.158 0.00 0.00 0.00 4.00
3136 5218 1.522355 CCAGCCGAGCCACATACAG 60.522 63.158 0.00 0.00 0.00 2.74
3137 5219 2.584064 CCAGCCGAGCCACATACA 59.416 61.111 0.00 0.00 0.00 2.29
3138 5220 2.203070 CCCAGCCGAGCCACATAC 60.203 66.667 0.00 0.00 0.00 2.39
3139 5221 3.479203 CCCCAGCCGAGCCACATA 61.479 66.667 0.00 0.00 0.00 2.29
3148 5230 4.489771 ATTCGGAAGCCCCAGCCG 62.490 66.667 0.00 0.00 46.08 5.52
3149 5231 2.830370 CATTCGGAAGCCCCAGCC 60.830 66.667 0.00 0.00 41.25 4.85
3150 5232 1.821332 CTCATTCGGAAGCCCCAGC 60.821 63.158 0.00 0.00 40.32 4.85
3151 5233 0.035056 AACTCATTCGGAAGCCCCAG 60.035 55.000 0.00 0.00 34.14 4.45
3152 5234 0.404040 AAACTCATTCGGAAGCCCCA 59.596 50.000 0.00 0.00 34.14 4.96
3153 5235 1.095600 GAAACTCATTCGGAAGCCCC 58.904 55.000 0.00 0.00 0.00 5.80
3173 5255 0.603065 AACATCAAAAGCCGGAAGCC 59.397 50.000 5.05 0.00 45.47 4.35
3174 5256 2.159379 CCTAACATCAAAAGCCGGAAGC 60.159 50.000 5.05 0.00 44.25 3.86
3175 5257 2.159379 GCCTAACATCAAAAGCCGGAAG 60.159 50.000 5.05 0.00 0.00 3.46
3176 5258 1.816224 GCCTAACATCAAAAGCCGGAA 59.184 47.619 5.05 0.00 0.00 4.30
3177 5259 1.004277 AGCCTAACATCAAAAGCCGGA 59.996 47.619 5.05 0.00 0.00 5.14
3178 5260 1.463674 AGCCTAACATCAAAAGCCGG 58.536 50.000 0.00 0.00 0.00 6.13
3179 5261 3.065371 CCTAAGCCTAACATCAAAAGCCG 59.935 47.826 0.00 0.00 0.00 5.52
3180 5262 4.017126 ACCTAAGCCTAACATCAAAAGCC 58.983 43.478 0.00 0.00 0.00 4.35
3181 5263 4.700213 TCACCTAAGCCTAACATCAAAAGC 59.300 41.667 0.00 0.00 0.00 3.51
3182 5264 5.940470 ACTCACCTAAGCCTAACATCAAAAG 59.060 40.000 0.00 0.00 0.00 2.27
3183 5265 5.705441 CACTCACCTAAGCCTAACATCAAAA 59.295 40.000 0.00 0.00 0.00 2.44
3184 5266 5.245531 CACTCACCTAAGCCTAACATCAAA 58.754 41.667 0.00 0.00 0.00 2.69
3185 5267 4.323485 CCACTCACCTAAGCCTAACATCAA 60.323 45.833 0.00 0.00 0.00 2.57
3186 5268 3.197766 CCACTCACCTAAGCCTAACATCA 59.802 47.826 0.00 0.00 0.00 3.07
3187 5269 3.197983 ACCACTCACCTAAGCCTAACATC 59.802 47.826 0.00 0.00 0.00 3.06
3188 5270 3.182152 ACCACTCACCTAAGCCTAACAT 58.818 45.455 0.00 0.00 0.00 2.71
3189 5271 2.616524 ACCACTCACCTAAGCCTAACA 58.383 47.619 0.00 0.00 0.00 2.41
3190 5272 3.697619 AACCACTCACCTAAGCCTAAC 57.302 47.619 0.00 0.00 0.00 2.34
3191 5273 3.244770 CCAAACCACTCACCTAAGCCTAA 60.245 47.826 0.00 0.00 0.00 2.69
3192 5274 2.304761 CCAAACCACTCACCTAAGCCTA 59.695 50.000 0.00 0.00 0.00 3.93
3193 5275 1.073923 CCAAACCACTCACCTAAGCCT 59.926 52.381 0.00 0.00 0.00 4.58
3194 5276 1.534729 CCAAACCACTCACCTAAGCC 58.465 55.000 0.00 0.00 0.00 4.35
3195 5277 1.202891 ACCCAAACCACTCACCTAAGC 60.203 52.381 0.00 0.00 0.00 3.09
3196 5278 2.951229 ACCCAAACCACTCACCTAAG 57.049 50.000 0.00 0.00 0.00 2.18
3197 5279 3.071892 CACTACCCAAACCACTCACCTAA 59.928 47.826 0.00 0.00 0.00 2.69
3198 5280 2.635915 CACTACCCAAACCACTCACCTA 59.364 50.000 0.00 0.00 0.00 3.08
3199 5281 1.420138 CACTACCCAAACCACTCACCT 59.580 52.381 0.00 0.00 0.00 4.00
3200 5282 1.544759 CCACTACCCAAACCACTCACC 60.545 57.143 0.00 0.00 0.00 4.02
3201 5283 1.892209 CCACTACCCAAACCACTCAC 58.108 55.000 0.00 0.00 0.00 3.51
3202 5284 0.109723 GCCACTACCCAAACCACTCA 59.890 55.000 0.00 0.00 0.00 3.41
3203 5285 0.608308 GGCCACTACCCAAACCACTC 60.608 60.000 0.00 0.00 0.00 3.51
3204 5286 1.458927 GGCCACTACCCAAACCACT 59.541 57.895 0.00 0.00 0.00 4.00
3205 5287 4.090723 GGCCACTACCCAAACCAC 57.909 61.111 0.00 0.00 0.00 4.16
3213 5295 2.367202 TGCTAGCTGGGCCACTACC 61.367 63.158 17.23 1.99 0.00 3.18
3214 5296 1.153349 GTGCTAGCTGGGCCACTAC 60.153 63.158 17.23 5.65 0.00 2.73
3215 5297 2.367202 GGTGCTAGCTGGGCCACTA 61.367 63.158 17.23 8.85 0.00 2.74
3216 5298 3.721706 GGTGCTAGCTGGGCCACT 61.722 66.667 17.23 8.06 0.00 4.00
3217 5299 4.803908 GGGTGCTAGCTGGGCCAC 62.804 72.222 17.23 4.06 0.00 5.01
3220 5302 3.705934 GAAGGGGTGCTAGCTGGGC 62.706 68.421 17.23 0.81 0.00 5.36
3221 5303 1.639635 ATGAAGGGGTGCTAGCTGGG 61.640 60.000 17.23 0.00 0.00 4.45
3222 5304 0.179034 GATGAAGGGGTGCTAGCTGG 60.179 60.000 17.23 0.00 0.00 4.85
3223 5305 0.543277 TGATGAAGGGGTGCTAGCTG 59.457 55.000 17.23 0.00 0.00 4.24
3224 5306 1.516110 ATGATGAAGGGGTGCTAGCT 58.484 50.000 17.23 0.00 0.00 3.32
3225 5307 3.710209 ATATGATGAAGGGGTGCTAGC 57.290 47.619 8.10 8.10 0.00 3.42
3226 5308 3.755378 GCAATATGATGAAGGGGTGCTAG 59.245 47.826 0.00 0.00 0.00 3.42
3227 5309 3.138098 TGCAATATGATGAAGGGGTGCTA 59.862 43.478 0.00 0.00 0.00 3.49
3228 5310 2.091720 TGCAATATGATGAAGGGGTGCT 60.092 45.455 0.00 0.00 0.00 4.40
3229 5311 2.309613 TGCAATATGATGAAGGGGTGC 58.690 47.619 0.00 0.00 0.00 5.01
3230 5312 4.703575 CCTATGCAATATGATGAAGGGGTG 59.296 45.833 0.00 0.00 0.00 4.61
3231 5313 4.603171 TCCTATGCAATATGATGAAGGGGT 59.397 41.667 0.00 0.00 0.00 4.95
3232 5314 5.183530 TCCTATGCAATATGATGAAGGGG 57.816 43.478 0.00 0.00 0.00 4.79
3233 5315 5.813383 ACTCCTATGCAATATGATGAAGGG 58.187 41.667 0.00 0.00 0.00 3.95
3234 5316 6.820656 GGTACTCCTATGCAATATGATGAAGG 59.179 42.308 0.00 0.00 0.00 3.46
3235 5317 6.533012 CGGTACTCCTATGCAATATGATGAAG 59.467 42.308 0.00 0.00 0.00 3.02
3236 5318 6.398095 CGGTACTCCTATGCAATATGATGAA 58.602 40.000 0.00 0.00 0.00 2.57
3237 5319 5.105351 CCGGTACTCCTATGCAATATGATGA 60.105 44.000 0.00 0.00 0.00 2.92
3238 5320 5.111989 CCGGTACTCCTATGCAATATGATG 58.888 45.833 0.00 0.00 0.00 3.07
3239 5321 4.383118 GCCGGTACTCCTATGCAATATGAT 60.383 45.833 1.90 0.00 0.00 2.45
3240 5322 3.056107 GCCGGTACTCCTATGCAATATGA 60.056 47.826 1.90 0.00 0.00 2.15
3241 5323 3.262420 GCCGGTACTCCTATGCAATATG 58.738 50.000 1.90 0.00 0.00 1.78
3242 5324 2.903784 TGCCGGTACTCCTATGCAATAT 59.096 45.455 1.90 0.00 31.18 1.28
3243 5325 2.321719 TGCCGGTACTCCTATGCAATA 58.678 47.619 1.90 0.00 31.18 1.90
3244 5326 1.128200 TGCCGGTACTCCTATGCAAT 58.872 50.000 1.90 0.00 31.18 3.56
3245 5327 1.128200 ATGCCGGTACTCCTATGCAA 58.872 50.000 1.90 0.00 35.33 4.08
3246 5328 2.003937 TATGCCGGTACTCCTATGCA 57.996 50.000 1.90 0.00 35.83 3.96
3247 5329 2.233922 ACATATGCCGGTACTCCTATGC 59.766 50.000 1.90 0.00 0.00 3.14
3248 5330 4.245660 CAACATATGCCGGTACTCCTATG 58.754 47.826 1.90 6.32 0.00 2.23
3249 5331 4.537135 CAACATATGCCGGTACTCCTAT 57.463 45.455 1.90 0.00 0.00 2.57
3251 5333 2.910688 CAACATATGCCGGTACTCCT 57.089 50.000 1.90 0.00 0.00 3.69
3267 5349 2.165030 CTGAATCCACCATCTTGGCAAC 59.835 50.000 0.00 0.00 42.67 4.17
3268 5350 2.449464 CTGAATCCACCATCTTGGCAA 58.551 47.619 0.00 0.00 42.67 4.52
3269 5351 1.341285 CCTGAATCCACCATCTTGGCA 60.341 52.381 0.00 0.00 42.67 4.92
3270 5352 1.396653 CCTGAATCCACCATCTTGGC 58.603 55.000 0.00 0.00 42.67 4.52
3271 5353 1.341285 TGCCTGAATCCACCATCTTGG 60.341 52.381 0.00 0.00 45.02 3.61
3272 5354 1.747355 GTGCCTGAATCCACCATCTTG 59.253 52.381 0.00 0.00 0.00 3.02
3273 5355 1.355381 TGTGCCTGAATCCACCATCTT 59.645 47.619 0.00 0.00 0.00 2.40
3274 5356 0.994247 TGTGCCTGAATCCACCATCT 59.006 50.000 0.00 0.00 0.00 2.90
3275 5357 2.062971 ATGTGCCTGAATCCACCATC 57.937 50.000 0.00 0.00 0.00 3.51
3276 5358 2.104967 CAATGTGCCTGAATCCACCAT 58.895 47.619 0.00 0.00 0.00 3.55
3277 5359 1.203038 ACAATGTGCCTGAATCCACCA 60.203 47.619 0.00 0.00 0.00 4.17
3278 5360 1.549203 ACAATGTGCCTGAATCCACC 58.451 50.000 0.00 0.00 0.00 4.61
3279 5361 2.297033 ACAACAATGTGCCTGAATCCAC 59.703 45.455 0.00 0.00 38.69 4.02
3280 5362 2.596346 ACAACAATGTGCCTGAATCCA 58.404 42.857 0.00 0.00 38.69 3.41
3281 5363 4.782019 TTACAACAATGTGCCTGAATCC 57.218 40.909 0.00 0.00 40.84 3.01
3282 5364 7.088589 AGTATTACAACAATGTGCCTGAATC 57.911 36.000 0.00 0.00 40.84 2.52
3283 5365 7.466746 AAGTATTACAACAATGTGCCTGAAT 57.533 32.000 0.00 0.00 40.84 2.57
3284 5366 6.892658 AAGTATTACAACAATGTGCCTGAA 57.107 33.333 0.00 0.00 40.84 3.02
3285 5367 6.264292 ACAAAGTATTACAACAATGTGCCTGA 59.736 34.615 0.00 0.00 40.84 3.86
3286 5368 6.446318 ACAAAGTATTACAACAATGTGCCTG 58.554 36.000 0.00 0.00 40.84 4.85
3287 5369 6.648879 ACAAAGTATTACAACAATGTGCCT 57.351 33.333 0.00 0.00 40.84 4.75
3288 5370 7.487829 CCATACAAAGTATTACAACAATGTGCC 59.512 37.037 0.00 0.00 40.84 5.01
3289 5371 8.026607 ACCATACAAAGTATTACAACAATGTGC 58.973 33.333 0.00 0.00 40.84 4.57
3290 5372 9.554724 GACCATACAAAGTATTACAACAATGTG 57.445 33.333 0.00 0.00 40.84 3.21
3291 5373 8.736244 GGACCATACAAAGTATTACAACAATGT 58.264 33.333 0.00 0.00 43.74 2.71
3292 5374 8.956426 AGGACCATACAAAGTATTACAACAATG 58.044 33.333 0.00 0.00 0.00 2.82
3293 5375 9.174166 GAGGACCATACAAAGTATTACAACAAT 57.826 33.333 0.00 0.00 0.00 2.71
3294 5376 7.332430 CGAGGACCATACAAAGTATTACAACAA 59.668 37.037 0.00 0.00 0.00 2.83
3295 5377 6.814644 CGAGGACCATACAAAGTATTACAACA 59.185 38.462 0.00 0.00 0.00 3.33
3296 5378 7.037438 TCGAGGACCATACAAAGTATTACAAC 58.963 38.462 0.00 0.00 0.00 3.32
3297 5379 7.123098 TCTCGAGGACCATACAAAGTATTACAA 59.877 37.037 13.56 0.00 0.00 2.41
3298 5380 6.604396 TCTCGAGGACCATACAAAGTATTACA 59.396 38.462 13.56 0.00 0.00 2.41
3299 5381 7.035840 TCTCGAGGACCATACAAAGTATTAC 57.964 40.000 13.56 0.00 0.00 1.89
3300 5382 7.649533 TTCTCGAGGACCATACAAAGTATTA 57.350 36.000 13.56 0.00 0.00 0.98
3301 5383 6.540438 TTCTCGAGGACCATACAAAGTATT 57.460 37.500 13.56 0.00 0.00 1.89
3302 5384 6.732896 ATTCTCGAGGACCATACAAAGTAT 57.267 37.500 13.56 0.00 0.00 2.12
3303 5385 7.649533 TTATTCTCGAGGACCATACAAAGTA 57.350 36.000 13.56 0.00 0.00 2.24
3304 5386 6.540438 TTATTCTCGAGGACCATACAAAGT 57.460 37.500 13.56 0.00 0.00 2.66
3305 5387 7.210174 TGATTATTCTCGAGGACCATACAAAG 58.790 38.462 13.56 0.00 0.00 2.77
3306 5388 7.119709 TGATTATTCTCGAGGACCATACAAA 57.880 36.000 13.56 0.00 0.00 2.83
3307 5389 6.724893 TGATTATTCTCGAGGACCATACAA 57.275 37.500 13.56 0.00 0.00 2.41
3308 5390 6.724893 TTGATTATTCTCGAGGACCATACA 57.275 37.500 13.56 3.04 0.00 2.29
3309 5391 9.706691 TTTATTGATTATTCTCGAGGACCATAC 57.293 33.333 13.56 0.40 0.00 2.39
3310 5392 9.929180 CTTTATTGATTATTCTCGAGGACCATA 57.071 33.333 13.56 1.81 0.00 2.74
3311 5393 8.432805 ACTTTATTGATTATTCTCGAGGACCAT 58.567 33.333 13.56 0.00 0.00 3.55
3312 5394 7.710907 CACTTTATTGATTATTCTCGAGGACCA 59.289 37.037 13.56 0.00 0.00 4.02
3313 5395 7.171678 CCACTTTATTGATTATTCTCGAGGACC 59.828 40.741 13.56 0.00 0.00 4.46
3314 5396 7.307455 GCCACTTTATTGATTATTCTCGAGGAC 60.307 40.741 13.56 0.00 0.00 3.85
3315 5397 6.706270 GCCACTTTATTGATTATTCTCGAGGA 59.294 38.462 13.56 3.44 0.00 3.71
3316 5398 6.073003 GGCCACTTTATTGATTATTCTCGAGG 60.073 42.308 13.56 0.00 0.00 4.63
3317 5399 6.346919 CGGCCACTTTATTGATTATTCTCGAG 60.347 42.308 5.93 5.93 0.00 4.04
3318 5400 5.465390 CGGCCACTTTATTGATTATTCTCGA 59.535 40.000 2.24 0.00 0.00 4.04
3319 5401 5.236478 ACGGCCACTTTATTGATTATTCTCG 59.764 40.000 2.24 0.00 0.00 4.04
3320 5402 6.619801 ACGGCCACTTTATTGATTATTCTC 57.380 37.500 2.24 0.00 0.00 2.87
3321 5403 7.308589 GCATACGGCCACTTTATTGATTATTCT 60.309 37.037 2.24 0.00 36.11 2.40
3322 5404 6.801862 GCATACGGCCACTTTATTGATTATTC 59.198 38.462 2.24 0.00 36.11 1.75
3323 5405 6.264292 TGCATACGGCCACTTTATTGATTATT 59.736 34.615 2.24 0.00 43.89 1.40
3324 5406 5.767665 TGCATACGGCCACTTTATTGATTAT 59.232 36.000 2.24 0.00 43.89 1.28
3325 5407 5.126779 TGCATACGGCCACTTTATTGATTA 58.873 37.500 2.24 0.00 43.89 1.75
3326 5408 3.951037 TGCATACGGCCACTTTATTGATT 59.049 39.130 2.24 0.00 43.89 2.57
3327 5409 3.550820 TGCATACGGCCACTTTATTGAT 58.449 40.909 2.24 0.00 43.89 2.57
3328 5410 2.992593 TGCATACGGCCACTTTATTGA 58.007 42.857 2.24 0.00 43.89 2.57
3329 5411 3.565482 AGATGCATACGGCCACTTTATTG 59.435 43.478 2.24 0.00 43.89 1.90
3330 5412 3.815401 GAGATGCATACGGCCACTTTATT 59.185 43.478 2.24 0.00 43.89 1.40
3331 5413 3.403038 GAGATGCATACGGCCACTTTAT 58.597 45.455 2.24 0.00 43.89 1.40
3332 5414 2.484770 GGAGATGCATACGGCCACTTTA 60.485 50.000 2.24 0.00 43.89 1.85
3333 5415 1.668419 GAGATGCATACGGCCACTTT 58.332 50.000 2.24 0.00 43.89 2.66
3334 5416 0.179045 GGAGATGCATACGGCCACTT 60.179 55.000 2.24 0.00 43.89 3.16
3335 5417 1.447643 GGAGATGCATACGGCCACT 59.552 57.895 2.24 0.00 43.89 4.00
3336 5418 1.598130 GGGAGATGCATACGGCCAC 60.598 63.158 2.24 0.00 43.89 5.01
3337 5419 2.043604 CTGGGAGATGCATACGGCCA 62.044 60.000 2.24 0.61 43.89 5.36
3338 5420 1.302033 CTGGGAGATGCATACGGCC 60.302 63.158 0.00 0.00 43.89 6.13
3339 5421 0.322975 ATCTGGGAGATGCATACGGC 59.677 55.000 0.00 0.00 45.13 5.68
3340 5422 2.090400 CATCTGGGAGATGCATACGG 57.910 55.000 0.00 0.00 44.69 4.02
3348 5430 1.417288 GGCCTCTGCATCTGGGAGAT 61.417 60.000 0.00 0.00 43.58 2.75
3349 5431 2.068821 GGCCTCTGCATCTGGGAGA 61.069 63.158 0.00 0.00 42.24 3.71
3350 5432 2.509916 GGCCTCTGCATCTGGGAG 59.490 66.667 0.00 0.00 40.13 4.30
3351 5433 3.473647 CGGCCTCTGCATCTGGGA 61.474 66.667 0.00 0.00 40.13 4.37
3352 5434 4.559063 CCGGCCTCTGCATCTGGG 62.559 72.222 0.00 0.00 40.13 4.45
3353 5435 4.559063 CCCGGCCTCTGCATCTGG 62.559 72.222 0.00 0.00 40.13 3.86
3354 5436 4.559063 CCCCGGCCTCTGCATCTG 62.559 72.222 0.00 0.00 40.13 2.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.