AutoCloner

Multiple sequence alignment - TraesCS3B01G560400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS3B01G560400	chr3B	100.000	3170	0	0	1	3170	794545515	794542346	0.000000e+00	5854
1	TraesCS3B01G560400	chr3B	88.349	987	96	14	1415	2385	794840119	794839136	0.000000e+00	1168
2	TraesCS3B01G560400	chr3B	87.614	985	102	14	1415	2381	794593085	794592103	0.000000e+00	1125
3	TraesCS3B01G560400	chr3B	89.292	551	54	5	752	1297	794593690	794593140	0.000000e+00	686
4	TraesCS3B01G560400	chr3B	84.878	205	21	5	437	632	794841070	794840867	6.940000e-47	198
5	TraesCS3B01G560400	chr3D	95.383	2404	83	10	3	2385	592607004	592609400	0.000000e+00	3799
6	TraesCS3B01G560400	chr3D	87.940	995	98	13	1415	2388	592576741	592577734	0.000000e+00	1153
7	TraesCS3B01G560400	chr3D	89.753	527	49	5	752	1274	592575668	592576193	0.000000e+00	669
8	TraesCS3B01G560400	chr3A	95.175	2404	90	10	3	2385	723662846	723660448	0.000000e+00	3773
9	TraesCS3B01G560400	chr3A	88.528	985	95	12	1415	2385	724022974	724021994	0.000000e+00	1177
10	TraesCS3B01G560400	chr3A	94.899	745	38	0	2426	3170	441673	442417	0.000000e+00	1166
11	TraesCS3B01G560400	chr3A	91.834	747	40	4	2424	3170	738892459	738893184	0.000000e+00	1022
12	TraesCS3B01G560400	chr3A	87.764	474	24	7	2454	2927	738863012	738862573	1.010000e-144	523
13	TraesCS3B01G560400	chr3A	88.449	303	31	3	755	1055	724023579	724023279	2.320000e-96	363
14	TraesCS3B01G560400	chr2A	90.463	734	42	7	2437	3170	533912406	533911701	0.000000e+00	942
15	TraesCS3B01G560400	chr2A	96.203	553	21	0	2618	3170	704716806	704717358	0.000000e+00	905
16	TraesCS3B01G560400	chr2A	90.083	121	11	1	2430	2550	704716335	704716454	4.230000e-34	156
17	TraesCS3B01G560400	chr5A	95.722	561	24	0	2610	3170	38788009	38787449	0.000000e+00	904
18	TraesCS3B01G560400	chr7D	89.504	705	55	8	2479	3170	92604880	92605578	0.000000e+00	874
19	TraesCS3B01G560400	chr2D	89.910	664	52	8	2513	3170	4194573	4195227	0.000000e+00	841
20	TraesCS3B01G560400	chr4B	90.615	618	50	7	2558	3170	140715175	140715789	0.000000e+00	813
21	TraesCS3B01G560400	chr1D	92.679	560	32	5	2618	3170	475978520	475979077	0.000000e+00	798
22	TraesCS3B01G560400	chr1D	86.614	762	49	18	2425	3170	298577871	298578595	0.000000e+00	793

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS3B01G560400	chr3B	794542346	794545515	3169	True	5854.0	5854	100.0000	1	3170	1	chr3B.!!$R1	3169
1	TraesCS3B01G560400	chr3B	794592103	794593690	1587	True	905.5	1125	88.4530	752	2381	2	chr3B.!!$R2	1629
2	TraesCS3B01G560400	chr3B	794839136	794841070	1934	True	683.0	1168	86.6135	437	2385	2	chr3B.!!$R3	1948
3	TraesCS3B01G560400	chr3D	592607004	592609400	2396	False	3799.0	3799	95.3830	3	2385	1	chr3D.!!$F1	2382
4	TraesCS3B01G560400	chr3D	592575668	592577734	2066	False	911.0	1153	88.8465	752	2388	2	chr3D.!!$F2	1636
5	TraesCS3B01G560400	chr3A	723660448	723662846	2398	True	3773.0	3773	95.1750	3	2385	1	chr3A.!!$R1	2382
6	TraesCS3B01G560400	chr3A	441673	442417	744	False	1166.0	1166	94.8990	2426	3170	1	chr3A.!!$F1	744
7	TraesCS3B01G560400	chr3A	738892459	738893184	725	False	1022.0	1022	91.8340	2424	3170	1	chr3A.!!$F2	746
8	TraesCS3B01G560400	chr3A	724021994	724023579	1585	True	770.0	1177	88.4885	755	2385	2	chr3A.!!$R3	1630
9	TraesCS3B01G560400	chr2A	533911701	533912406	705	True	942.0	942	90.4630	2437	3170	1	chr2A.!!$R1	733
10	TraesCS3B01G560400	chr2A	704716335	704717358	1023	False	530.5	905	93.1430	2430	3170	2	chr2A.!!$F1	740
11	TraesCS3B01G560400	chr5A	38787449	38788009	560	True	904.0	904	95.7220	2610	3170	1	chr5A.!!$R1	560
12	TraesCS3B01G560400	chr7D	92604880	92605578	698	False	874.0	874	89.5040	2479	3170	1	chr7D.!!$F1	691
13	TraesCS3B01G560400	chr2D	4194573	4195227	654	False	841.0	841	89.9100	2513	3170	1	chr2D.!!$F1	657
14	TraesCS3B01G560400	chr4B	140715175	140715789	614	False	813.0	813	90.6150	2558	3170	1	chr4B.!!$F1	612
15	TraesCS3B01G560400	chr1D	475978520	475979077	557	False	798.0	798	92.6790	2618	3170	1	chr1D.!!$F2	552
16	TraesCS3B01G560400	chr1D	298577871	298578595	724	False	793.0	793	86.6140	2425	3170	1	chr1D.!!$F1	745

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
354	357	1.454479	GAGGACCCCCGTGTATCGA	60.454	63.158	0.00	0.0	42.86	3.59	F
1663	2205	0.179048	TCCGCGATCAAGGCATCATT	60.179	50.000	8.23	0.0	0.00	2.57	F

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
2001	2548	1.867233	CCTTTCGGCGGTGATGAATAG	59.133	52.381	7.21	0.0	0.0	1.73	R
2498	3059	2.066393	TGGCGGGGAATGAGGAGAG	61.066	63.158	0.00	0.0	0.0	3.20	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
52	53	2.307098	AGGAGATGTTCTGGGGAAACTG	59.693	50.000	0.00	0.00	32.81	3.16
53	54	2.040412	GGAGATGTTCTGGGGAAACTGT	59.960	50.000	0.00	0.00	32.81	3.55
59	60	3.117663	TGTTCTGGGGAAACTGTAGCTTT	60.118	43.478	0.00	0.00	32.81	3.51
118	119	2.484264	GCTGAACGTTATCTTGGCTTGT	59.516	45.455	0.00	0.00	0.00	3.16
176	179	4.881019	CTATCTCAAGGATAGGTGTGGG	57.119	50.000	5.12	0.00	46.13	4.61
211	214	3.337358	CTGGATGGAAAAATGTTTGGCC	58.663	45.455	0.00	0.00	0.00	5.36
246	249	8.795842	AATATGGTTGGTAGTTCGTTTATTCA	57.204	30.769	0.00	0.00	0.00	2.57
254	257	6.425721	TGGTAGTTCGTTTATTCACCAGAAAG	59.574	38.462	0.00	0.00	37.29	2.62
266	269	5.489792	TCACCAGAAAGTTCATAGAGCTT	57.510	39.130	0.00	0.00	34.73	3.74
267	270	5.240891	TCACCAGAAAGTTCATAGAGCTTG	58.759	41.667	0.00	0.00	33.62	4.01
301	304	7.019388	TCCCAGATTTCCTAGCAAGATATAGT	58.981	38.462	0.00	0.00	0.00	2.12
354	357	1.454479	GAGGACCCCCGTGTATCGA	60.454	63.158	0.00	0.00	42.86	3.59
357	360	1.755783	GACCCCCGTGTATCGAGGT	60.756	63.158	0.00	0.00	44.40	3.85
416	419	6.068010	TGGAATAAATGCCTATTTGATCCGT	58.932	36.000	0.00	0.00	41.00	4.69
830	888	5.012354	ACTGAAATGGAGAAATGCCAAATGT	59.988	36.000	0.00	0.00	39.21	2.71
858	916	6.466812	GTTGTACCTAACCTAAGCACCTAAA	58.533	40.000	0.00	0.00	0.00	1.85
869	928	9.537192	AACCTAAGCACCTAAAAATTACAAAAC	57.463	29.630	0.00	0.00	0.00	2.43
894	953	4.724262	GGCCTGTCTTTCTGGACC	57.276	61.111	0.00	0.00	37.22	4.46
1019	1080	9.991906	ACTAAACACAACACATAGTAGTACAAT	57.008	29.630	2.52	0.00	0.00	2.71
1027	1088	7.979444	ACACATAGTAGTACAATTGCAAAGT	57.021	32.000	1.71	8.24	0.00	2.66
1222	1283	0.466189	GCCATCATTCCACCCATCGT	60.466	55.000	0.00	0.00	0.00	3.73
1375	1904	6.823689	ACCTCATATTTACAGAACATGTGTCC	59.176	38.462	0.00	0.00	43.80	4.02
1646	2185	1.001815	CATCGTGGTTGTGGTGTTTCC	60.002	52.381	0.00	0.00	0.00	3.13
1663	2205	0.179048	TCCGCGATCAAGGCATCATT	60.179	50.000	8.23	0.00	0.00	2.57
1736	2278	0.694771	TCTGCTCTCTGGGTTGCAAT	59.305	50.000	0.59	0.00	34.90	3.56
1777	2320	6.675413	TGTGTAACTAGTGAAACATACCCT	57.325	37.500	0.00	0.00	37.11	4.34
1787	2330	9.661563	CTAGTGAAACATACCCTGTGTTATTAA	57.338	33.333	0.00	0.00	41.43	1.40
1991	2538	9.021807	CAGATTATTGCAAGGATAATCCATCTT	57.978	33.333	20.21	6.13	43.01	2.40
2001	2548	2.149973	AATCCATCTTCACCAAGGGC	57.850	50.000	0.00	0.00	0.00	5.19
2007	2554	3.371917	CCATCTTCACCAAGGGCTATTCA	60.372	47.826	0.00	0.00	0.00	2.57
2141	2692	5.699458	AGGTCGTATGTAAGGTTTTGAACAG	59.301	40.000	0.00	0.00	0.00	3.16
2193	2751	1.001487	TGCTTGTTTGATGTGCCTTCG	60.001	47.619	0.00	0.00	0.00	3.79
2371	2932	6.356556	AGCACATAATGGTAAGCTATGTTGA	58.643	36.000	0.00	0.00	37.23	3.18
2392	2953	9.337396	TGTTGATAGAACATACATAAATGGACC	57.663	33.333	0.00	0.00	0.00	4.46
2393	2954	8.784043	GTTGATAGAACATACATAAATGGACCC	58.216	37.037	0.00	0.00	0.00	4.46
2394	2955	8.275187	TGATAGAACATACATAAATGGACCCT	57.725	34.615	0.00	0.00	0.00	4.34
2395	2956	8.375506	TGATAGAACATACATAAATGGACCCTC	58.624	37.037	0.00	0.00	0.00	4.30
2396	2957	6.575244	AGAACATACATAAATGGACCCTCA	57.425	37.500	0.00	0.00	0.00	3.86
2397	2958	6.595682	AGAACATACATAAATGGACCCTCAG	58.404	40.000	0.00	0.00	0.00	3.35
2398	2959	5.310409	ACATACATAAATGGACCCTCAGG	57.690	43.478	0.00	0.00	40.04	3.86
2399	2960	4.975147	ACATACATAAATGGACCCTCAGGA	59.025	41.667	0.00	0.00	36.73	3.86
2400	2961	3.933861	ACATAAATGGACCCTCAGGAC	57.066	47.619	0.00	0.00	36.73	3.85
2401	2962	3.464828	ACATAAATGGACCCTCAGGACT	58.535	45.455	0.00	0.00	36.73	3.85
2402	2963	3.200825	ACATAAATGGACCCTCAGGACTG	59.799	47.826	0.00	0.00	36.73	3.51
2403	2964	0.995024	AAATGGACCCTCAGGACTGG	59.005	55.000	0.00	0.00	36.73	4.00
2404	2965	1.566298	AATGGACCCTCAGGACTGGC	61.566	60.000	0.00	0.00	36.73	4.85
2405	2966	2.607750	GGACCCTCAGGACTGGCA	60.608	66.667	0.00	0.00	36.73	4.92
2406	2967	2.224159	GGACCCTCAGGACTGGCAA	61.224	63.158	0.00	0.00	36.73	4.52
2407	2968	1.566298	GGACCCTCAGGACTGGCAAT	61.566	60.000	0.00	0.00	36.73	3.56
2408	2969	0.107459	GACCCTCAGGACTGGCAATC	60.107	60.000	0.00	0.00	36.73	2.67
2409	2970	0.842030	ACCCTCAGGACTGGCAATCA	60.842	55.000	0.00	0.00	36.73	2.57
2410	2971	0.393537	CCCTCAGGACTGGCAATCAC	60.394	60.000	0.00	0.00	33.47	3.06
2411	2972	0.393537	CCTCAGGACTGGCAATCACC	60.394	60.000	0.00	0.00	0.00	4.02
2412	2973	0.393537	CTCAGGACTGGCAATCACCC	60.394	60.000	0.00	0.00	0.00	4.61
2413	2974	1.379044	CAGGACTGGCAATCACCCC	60.379	63.158	0.00	0.00	0.00	4.95
2414	2975	2.438434	GGACTGGCAATCACCCCG	60.438	66.667	0.00	0.00	0.00	5.73
2415	2976	2.351276	GACTGGCAATCACCCCGT	59.649	61.111	0.00	0.00	0.00	5.28
2416	2977	2.034066	ACTGGCAATCACCCCGTG	59.966	61.111	0.00	0.00	34.45	4.94
2417	2978	2.034066	CTGGCAATCACCCCGTGT	59.966	61.111	0.00	0.00	34.79	4.49
2418	2979	2.282110	TGGCAATCACCCCGTGTG	60.282	61.111	0.00	0.00	46.88	3.82
2419	2980	2.282180	GGCAATCACCCCGTGTGT	60.282	61.111	2.71	0.00	45.61	3.72
2420	2981	1.901464	GGCAATCACCCCGTGTGTT	60.901	57.895	2.71	0.00	45.61	3.32
2421	2982	1.460273	GGCAATCACCCCGTGTGTTT	61.460	55.000	2.71	0.00	45.61	2.83
2422	2983	0.387565	GCAATCACCCCGTGTGTTTT	59.612	50.000	2.71	0.00	45.61	2.43
2423	2984	1.202475	GCAATCACCCCGTGTGTTTTT	60.202	47.619	2.71	0.00	45.61	1.94
2424	2985	2.738135	CAATCACCCCGTGTGTTTTTC	58.262	47.619	2.71	0.00	45.61	2.29
2425	2986	1.324383	ATCACCCCGTGTGTTTTTCC	58.676	50.000	2.71	0.00	45.61	3.13
2426	2987	0.752376	TCACCCCGTGTGTTTTTCCC	60.752	55.000	2.71	0.00	45.61	3.97
2427	2988	1.038130	CACCCCGTGTGTTTTTCCCA	61.038	55.000	0.00	0.00	40.26	4.37
2506	3067	4.465446	CGCCTCCCCCTCTCCTCA	62.465	72.222	0.00	0.00	0.00	3.86
2516	3077	2.040442	TCTCCTCATTCCCCGCCA	59.960	61.111	0.00	0.00	0.00	5.69
2653	3506	2.199652	CCGCTTTTTCCTGGTGGCA	61.200	57.895	0.00	0.00	0.00	4.92
2859	3718	2.361104	GCCCGGCTTGGATGTTCA	60.361	61.111	0.71	0.00	42.00	3.18
3122	3981	1.961277	CAACGCTTTCTCCGGCTGT	60.961	57.895	0.00	0.00	0.00	4.40

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
1	2	9.822185	AAAGCAAACTGAAGATTTGTCTAAATT	57.178	25.926	0.00	0.00	38.93	1.82
14	15	4.389374	TCTCCTACCAAAGCAAACTGAAG	58.611	43.478	0.00	0.00	0.00	3.02
52	53	8.613482	GTGAAGAATACCCTTAATCAAAGCTAC	58.387	37.037	0.00	0.00	33.49	3.58
53	54	8.325787	TGTGAAGAATACCCTTAATCAAAGCTA	58.674	33.333	0.00	0.00	33.49	3.32
59	60	6.389869	AGGGATGTGAAGAATACCCTTAATCA	59.610	38.462	0.00	0.00	44.27	2.57
118	119	5.818887	TGATTGATTTCCAACATCAGAGGA	58.181	37.500	0.00	0.00	37.63	3.71
176	179	2.167075	CCATCCAGCCCTGAACATTTTC	59.833	50.000	0.00	0.00	0.00	2.29
211	214	1.533756	CCAACCATATTTTCGCTGCCG	60.534	52.381	0.00	0.00	0.00	5.69
246	249	5.489792	TCAAGCTCTATGAACTTTCTGGT	57.510	39.130	0.00	0.00	0.00	4.00
254	257	6.652900	GGGATCCTATTTCAAGCTCTATGAAC	59.347	42.308	12.58	0.00	36.57	3.18
266	269	6.240002	GCTAGGAAATCTGGGATCCTATTTCA	60.240	42.308	28.81	18.43	43.14	2.69
267	270	6.176896	GCTAGGAAATCTGGGATCCTATTTC	58.823	44.000	24.53	24.53	43.14	2.17
354	357	1.963985	ATCCAGAGGCAAGAGAACCT	58.036	50.000	0.00	0.00	39.65	3.50
357	360	2.373169	ACACAATCCAGAGGCAAGAGAA	59.627	45.455	0.00	0.00	0.00	2.87
757	787	5.523916	ACATCTAGGAATACATTTCACGTGC	59.476	40.000	11.67	0.00	0.00	5.34
858	916	4.161377	AGGCCCGCATATGTTTTGTAATTT	59.839	37.500	0.00	0.00	0.00	1.82
869	928	0.947244	GAAAGACAGGCCCGCATATG	59.053	55.000	0.00	0.00	0.00	1.78
894	953	0.883833	GGGGCTGAAACTGACATGTG	59.116	55.000	1.15	0.00	0.00	3.21
1019	1080	4.742659	GGCGAAAACAAAGATACTTTGCAA	59.257	37.500	19.64	0.00	32.93	4.08
1027	1088	4.157656	CCCTTCATGGCGAAAACAAAGATA	59.842	41.667	0.00	0.00	31.71	1.98
1222	1283	5.250200	GTTGTTCACCATACCTGGATTACA	58.750	41.667	0.00	0.00	46.37	2.41
1352	1881	7.848223	TGGACACATGTTCTGTAAATATGAG	57.152	36.000	0.00	0.00	35.91	2.90
1362	1891	4.578516	TGGTAACTTTGGACACATGTTCTG	59.421	41.667	0.00	0.00	37.61	3.02
1375	1904	8.798402	TGGGTTGTATTAGATTTGGTAACTTTG	58.202	33.333	0.00	0.00	37.61	2.77
1430	1968	8.406297	GGTAGATAATCCACCTTTTCATGAAAC	58.594	37.037	20.35	4.82	0.00	2.78
1442	1980	5.741011	TGACACAAAGGTAGATAATCCACC	58.259	41.667	0.00	0.00	0.00	4.61
1646	2185	2.738314	TGATAATGATGCCTTGATCGCG	59.262	45.455	0.00	0.00	0.00	5.87
1663	2205	9.122779	TGCAAATCTCACAATTGTATGATGATA	57.877	29.630	19.59	5.32	0.00	2.15
1764	2306	9.783256	GAATTAATAACACAGGGTATGTTTCAC	57.217	33.333	0.00	0.00	41.41	3.18
1991	2538	2.092429	GGTGATGAATAGCCCTTGGTGA	60.092	50.000	0.00	0.00	0.00	4.02
2001	2548	1.867233	CCTTTCGGCGGTGATGAATAG	59.133	52.381	7.21	0.00	0.00	1.73
2007	2554	2.325393	GATCCCCTTTCGGCGGTGAT	62.325	60.000	7.21	0.20	0.00	3.06
2371	2932	8.275187	TGAGGGTCCATTTATGTATGTTCTAT	57.725	34.615	0.00	0.00	0.00	1.98
2385	2946	1.566298	GCCAGTCCTGAGGGTCCATT	61.566	60.000	0.00	0.00	0.00	3.16
2387	2948	2.607750	GCCAGTCCTGAGGGTCCA	60.608	66.667	0.00	0.00	0.00	4.02
2388	2949	1.566298	ATTGCCAGTCCTGAGGGTCC	61.566	60.000	0.00	0.00	0.00	4.46
2389	2950	0.107459	GATTGCCAGTCCTGAGGGTC	60.107	60.000	0.00	0.00	0.00	4.46
2390	2951	0.842030	TGATTGCCAGTCCTGAGGGT	60.842	55.000	0.00	0.00	0.00	4.34
2391	2952	0.393537	GTGATTGCCAGTCCTGAGGG	60.394	60.000	0.00	0.00	0.00	4.30
2392	2953	0.393537	GGTGATTGCCAGTCCTGAGG	60.394	60.000	0.00	0.00	0.00	3.86
2393	2954	0.393537	GGGTGATTGCCAGTCCTGAG	60.394	60.000	0.00	0.00	0.00	3.35
2394	2955	1.685224	GGGTGATTGCCAGTCCTGA	59.315	57.895	0.00	0.00	0.00	3.86
2395	2956	1.379044	GGGGTGATTGCCAGTCCTG	60.379	63.158	0.00	0.00	0.00	3.86
2396	2957	2.971598	CGGGGTGATTGCCAGTCCT	61.972	63.158	0.00	0.00	0.00	3.85
2397	2958	2.438434	CGGGGTGATTGCCAGTCC	60.438	66.667	0.00	0.00	0.00	3.85
2398	2959	2.040544	CACGGGGTGATTGCCAGTC	61.041	63.158	0.00	0.00	35.23	3.51
2399	2960	2.034066	CACGGGGTGATTGCCAGT	59.966	61.111	0.00	0.00	35.23	4.00
2400	2961	2.034066	ACACGGGGTGATTGCCAG	59.966	61.111	2.29	0.00	36.96	4.85
2409	2970	1.038681	GTGGGAAAAACACACGGGGT	61.039	55.000	0.00	0.00	43.22	4.95
2410	2971	1.737201	GTGGGAAAAACACACGGGG	59.263	57.895	0.00	0.00	43.22	5.73
2415	2976	4.709690	GGGGGTGGGAAAAACACA	57.290	55.556	0.00	0.00	40.54	3.72
2498	3059	2.066393	TGGCGGGGAATGAGGAGAG	61.066	63.158	0.00	0.00	0.00	3.20
2643	3496	2.997315	CCTCGACTGCCACCAGGA	60.997	66.667	0.00	0.00	43.53	3.86
2859	3718	3.941188	CAGGGAGCACCACACCGT	61.941	66.667	1.58	0.00	43.89	4.83

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.