Multiple sequence alignment - TraesCS3B01G559200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G559200 chr3B 100.000 2369 0 0 1 2369 793118013 793120381 0.000000e+00 4375.0
1 TraesCS3B01G559200 chr3B 99.361 1408 9 0 608 2015 169349145 169347738 0.000000e+00 2551.0
2 TraesCS3B01G559200 chr3B 96.850 127 4 0 2042 2168 555551708 555551582 1.840000e-51 213.0
3 TraesCS3B01G559200 chr3B 85.827 127 18 0 2165 2291 461301855 461301981 4.110000e-28 135.0
4 TraesCS3B01G559200 chr7B 99.504 1410 4 2 606 2015 721298095 721299501 0.000000e+00 2562.0
5 TraesCS3B01G559200 chr2A 99.433 1410 8 0 606 2015 590787103 590785694 0.000000e+00 2560.0
6 TraesCS3B01G559200 chr2A 96.214 1215 35 3 812 2015 441097380 441098594 0.000000e+00 1978.0
7 TraesCS3B01G559200 chr2A 95.146 206 9 1 2164 2369 737424448 737424244 8.170000e-85 324.0
8 TraesCS3B01G559200 chr2A 92.424 132 7 2 2037 2168 46335513 46335641 4.020000e-43 185.0
9 TraesCS3B01G559200 chr2A 86.364 154 17 3 2165 2314 527802641 527802794 5.240000e-37 165.0
10 TraesCS3B01G559200 chr3A 99.432 1409 8 0 607 2015 721633093 721631685 0.000000e+00 2558.0
11 TraesCS3B01G559200 chr3A 86.441 59 8 0 405 463 721594176 721594118 5.470000e-07 65.8
12 TraesCS3B01G559200 chr3A 100.000 32 0 0 338 369 721594359 721594328 2.540000e-05 60.2
13 TraesCS3B01G559200 chr6B 98.937 1411 14 1 606 2015 474539988 474541398 0.000000e+00 2521.0
14 TraesCS3B01G559200 chr6B 89.349 169 16 1 606 772 159796155 159796323 6.630000e-51 211.0
15 TraesCS3B01G559200 chr6B 96.063 127 4 1 2042 2168 247036420 247036295 3.090000e-49 206.0
16 TraesCS3B01G559200 chr6B 90.076 131 10 1 2037 2167 247041700 247041573 1.460000e-37 167.0
17 TraesCS3B01G559200 chr6B 94.595 37 0 1 436 470 632239166 632239202 3.290000e-04 56.5
18 TraesCS3B01G559200 chr6A 98.865 1410 14 2 606 2015 462594578 462593171 0.000000e+00 2514.0
19 TraesCS3B01G559200 chr6A 94.595 37 0 1 436 470 562702399 562702435 3.290000e-04 56.5
20 TraesCS3B01G559200 chr1A 98.652 1410 18 1 606 2015 335115466 335116874 0.000000e+00 2497.0
21 TraesCS3B01G559200 chr1A 93.500 200 13 0 2170 2369 444936631 444936830 4.950000e-77 298.0
22 TraesCS3B01G559200 chr4A 96.464 1414 46 3 606 2015 540821717 540823130 0.000000e+00 2331.0
23 TraesCS3B01G559200 chr4A 96.850 127 4 0 2042 2168 729645706 729645580 1.840000e-51 213.0
24 TraesCS3B01G559200 chr5A 95.899 634 8 1 606 1239 46483036 46483651 0.000000e+00 1011.0
25 TraesCS3B01G559200 chr5A 98.565 209 2 1 2161 2369 692549817 692550024 3.720000e-98 368.0
26 TraesCS3B01G559200 chr5A 98.086 209 3 1 2161 2369 692543248 692543455 1.730000e-96 363.0
27 TraesCS3B01G559200 chr5A 100.000 132 0 0 2037 2168 606395243 606395112 6.540000e-61 244.0
28 TraesCS3B01G559200 chr5A 92.308 104 8 0 2266 2369 670233091 670233194 5.280000e-32 148.0
29 TraesCS3B01G559200 chr7D 93.175 337 23 0 1 337 79257690 79257354 1.640000e-136 496.0
30 TraesCS3B01G559200 chr7D 92.604 338 24 1 1 337 79321928 79321591 3.540000e-133 484.0
31 TraesCS3B01G559200 chr7D 85.437 103 14 1 2171 2273 34874558 34874659 3.220000e-19 106.0
32 TraesCS3B01G559200 chr7D 96.552 58 2 0 2037 2094 446552213 446552156 1.940000e-16 97.1
33 TraesCS3B01G559200 chr7D 95.833 48 2 0 2121 2168 446552155 446552108 7.020000e-11 78.7
34 TraesCS3B01G559200 chr7D 100.000 28 0 0 436 463 290795261 290795234 4.000000e-03 52.8
35 TraesCS3B01G559200 chr7D 100.000 28 0 0 436 463 290798544 290798571 4.000000e-03 52.8
36 TraesCS3B01G559200 chr2B 92.582 337 23 1 1 337 763194057 763193723 1.270000e-132 483.0
37 TraesCS3B01G559200 chr2B 92.582 337 23 1 1 337 763195858 763195524 1.270000e-132 483.0
38 TraesCS3B01G559200 chr2B 92.285 337 24 1 1 337 763197657 763197323 5.920000e-131 477.0
39 TraesCS3B01G559200 chr2B 92.285 337 24 1 1 337 763199458 763199124 5.920000e-131 477.0
40 TraesCS3B01G559200 chr2B 91.691 337 26 1 1 337 763192259 763191925 1.280000e-127 466.0
41 TraesCS3B01G559200 chr2B 86.364 154 17 3 2165 2314 755524793 755524946 5.240000e-37 165.0
42 TraesCS3B01G559200 chr2B 96.774 31 1 0 436 466 144681938 144681908 4.000000e-03 52.8
43 TraesCS3B01G559200 chr5D 92.285 337 26 0 1 337 385874131 385874467 1.650000e-131 479.0
44 TraesCS3B01G559200 chr5D 90.722 97 9 0 2195 2291 296875345 296875249 1.910000e-26 130.0
45 TraesCS3B01G559200 chr5D 90.722 97 9 0 2195 2291 501212355 501212259 1.910000e-26 130.0
46 TraesCS3B01G559200 chr5D 91.398 93 8 0 2195 2287 501515311 501515403 6.870000e-26 128.0
47 TraesCS3B01G559200 chr6D 91.813 342 23 2 1 342 28847308 28847644 2.760000e-129 472.0
48 TraesCS3B01G559200 chr4B 83.333 486 75 4 590 1074 429603081 429603561 6.010000e-121 444.0
49 TraesCS3B01G559200 chr4B 95.385 130 5 1 2039 2167 16786088 16786217 3.090000e-49 206.0
50 TraesCS3B01G559200 chr2D 93.689 206 9 2 2164 2369 331547330 331547129 2.960000e-79 305.0
51 TraesCS3B01G559200 chr1D 92.823 209 14 1 2161 2369 303805293 303805500 3.830000e-78 302.0
52 TraesCS3B01G559200 chr4D 92.823 209 11 2 2161 2369 508477433 508477637 1.380000e-77 300.0
53 TraesCS3B01G559200 chr3D 93.985 133 7 1 2037 2168 16448649 16448781 1.440000e-47 200.0
54 TraesCS3B01G559200 chr3D 92.424 132 7 3 2037 2168 32172803 32172931 4.020000e-43 185.0
55 TraesCS3B01G559200 chr3D 98.095 105 2 0 483 587 591254470 591254366 1.450000e-42 183.0
56 TraesCS3B01G559200 chr3D 89.423 104 11 0 2188 2291 175250100 175250203 5.310000e-27 132.0
57 TraesCS3B01G559200 chr3D 85.870 92 9 3 372 463 591340945 591340858 6.970000e-16 95.3
58 TraesCS3B01G559200 chr3D 100.000 29 0 0 341 369 591340990 591340962 1.000000e-03 54.7
59 TraesCS3B01G559200 chr5B 90.625 96 9 0 2195 2290 633120160 633120065 6.870000e-26 128.0
60 TraesCS3B01G559200 chrUn 88.660 97 11 0 2195 2291 356908854 356908950 4.140000e-23 119.0
61 TraesCS3B01G559200 chrUn 100.000 28 0 0 436 463 31750406 31750379 4.000000e-03 52.8
62 TraesCS3B01G559200 chrUn 100.000 28 0 0 436 463 31780139 31780112 4.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G559200 chr3B 793118013 793120381 2368 False 4375.0 4375 100.000 1 2369 1 chr3B.!!$F2 2368
1 TraesCS3B01G559200 chr3B 169347738 169349145 1407 True 2551.0 2551 99.361 608 2015 1 chr3B.!!$R1 1407
2 TraesCS3B01G559200 chr7B 721298095 721299501 1406 False 2562.0 2562 99.504 606 2015 1 chr7B.!!$F1 1409
3 TraesCS3B01G559200 chr2A 590785694 590787103 1409 True 2560.0 2560 99.433 606 2015 1 chr2A.!!$R1 1409
4 TraesCS3B01G559200 chr2A 441097380 441098594 1214 False 1978.0 1978 96.214 812 2015 1 chr2A.!!$F2 1203
5 TraesCS3B01G559200 chr3A 721631685 721633093 1408 True 2558.0 2558 99.432 607 2015 1 chr3A.!!$R1 1408
6 TraesCS3B01G559200 chr6B 474539988 474541398 1410 False 2521.0 2521 98.937 606 2015 1 chr6B.!!$F2 1409
7 TraesCS3B01G559200 chr6A 462593171 462594578 1407 True 2514.0 2514 98.865 606 2015 1 chr6A.!!$R1 1409
8 TraesCS3B01G559200 chr1A 335115466 335116874 1408 False 2497.0 2497 98.652 606 2015 1 chr1A.!!$F1 1409
9 TraesCS3B01G559200 chr4A 540821717 540823130 1413 False 2331.0 2331 96.464 606 2015 1 chr4A.!!$F1 1409
10 TraesCS3B01G559200 chr5A 46483036 46483651 615 False 1011.0 1011 95.899 606 1239 1 chr5A.!!$F1 633
11 TraesCS3B01G559200 chr2B 763191925 763199458 7533 True 477.2 483 92.285 1 337 5 chr2B.!!$R2 336

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
471 5383 0.106708 ACCTTGAAACTGCAGCTCGA 59.893 50.0 15.27 9.79 0.0 4.04 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2288 8225 0.184933 TGTCCTCCACAAACCCAAGG 59.815 55.0 0.0 0.0 29.3 3.61 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
61 1861 2.228138 TACTTTGCCGAGTGTCGTTT 57.772 45.000 0.00 0.00 38.40 3.60
145 3744 1.004440 GCTCCTCTTTGCCGTGAGT 60.004 57.895 0.00 0.00 0.00 3.41
146 3745 0.603975 GCTCCTCTTTGCCGTGAGTT 60.604 55.000 0.00 0.00 0.00 3.01
156 3755 3.175240 CGTGAGTTGCTCTCGGCG 61.175 66.667 0.00 0.00 45.46 6.46
161 3760 2.049063 GTTGCTCTCGGCGTCTGT 60.049 61.111 6.85 0.00 45.43 3.41
259 3858 0.455295 GAGAGTGACTCTCGGCGTTG 60.455 60.000 25.02 1.06 45.76 4.10
268 3867 2.681344 ACTCTCGGCGTTGTTTTCTTTT 59.319 40.909 6.85 0.00 0.00 2.27
270 3869 2.678836 TCTCGGCGTTGTTTTCTTTTCA 59.321 40.909 6.85 0.00 0.00 2.69
293 3892 4.119862 GAGTGTCTGTGTTTTAGCACTCA 58.880 43.478 15.01 0.00 42.35 3.41
314 3913 1.296715 GAAGAGCATGACACCCGGT 59.703 57.895 0.00 0.00 0.00 5.28
328 3927 2.936498 CACCCGGTGTACATCAGAATTC 59.064 50.000 9.64 0.00 0.00 2.17
337 3936 5.292101 GTGTACATCAGAATTCCAGTAGTGC 59.708 44.000 0.00 0.00 0.00 4.40
338 3937 4.833478 ACATCAGAATTCCAGTAGTGCT 57.167 40.909 0.65 0.00 0.00 4.40
339 3938 5.939764 ACATCAGAATTCCAGTAGTGCTA 57.060 39.130 0.65 0.00 0.00 3.49
342 3941 5.584253 TCAGAATTCCAGTAGTGCTAGTC 57.416 43.478 0.65 0.00 0.00 2.59
345 3944 4.096682 AGAATTCCAGTAGTGCTAGTCGAC 59.903 45.833 7.70 7.70 0.00 4.20
346 3945 1.747709 TCCAGTAGTGCTAGTCGACC 58.252 55.000 13.01 0.00 0.00 4.79
347 3946 1.003928 TCCAGTAGTGCTAGTCGACCA 59.996 52.381 13.01 0.00 0.00 4.02
349 3948 2.223595 CCAGTAGTGCTAGTCGACCATG 60.224 54.545 13.01 3.74 0.00 3.66
350 3949 2.025155 AGTAGTGCTAGTCGACCATGG 58.975 52.381 13.01 11.19 0.00 3.66
352 3951 1.144057 GTGCTAGTCGACCATGGGG 59.856 63.158 18.09 7.78 41.29 4.96
353 3952 2.063979 TGCTAGTCGACCATGGGGG 61.064 63.158 18.09 7.37 44.81 5.40
355 3954 1.749334 GCTAGTCGACCATGGGGGAG 61.749 65.000 18.09 4.16 41.15 4.30
356 3955 0.397254 CTAGTCGACCATGGGGGAGT 60.397 60.000 18.09 16.90 41.15 3.85
357 3956 0.686441 TAGTCGACCATGGGGGAGTG 60.686 60.000 18.09 0.00 41.15 3.51
358 3957 2.121832 TCGACCATGGGGGAGTGT 59.878 61.111 18.09 0.00 41.15 3.55
359 3958 0.974010 GTCGACCATGGGGGAGTGTA 60.974 60.000 18.09 0.00 41.15 2.90
360 3959 0.252330 TCGACCATGGGGGAGTGTAA 60.252 55.000 18.09 0.00 41.15 2.41
361 3960 0.616371 CGACCATGGGGGAGTGTAAA 59.384 55.000 18.09 0.00 41.15 2.01
362 3961 1.211949 CGACCATGGGGGAGTGTAAAT 59.788 52.381 18.09 0.00 41.15 1.40
363 3962 2.356741 CGACCATGGGGGAGTGTAAATT 60.357 50.000 18.09 0.00 41.15 1.82
364 3963 3.288092 GACCATGGGGGAGTGTAAATTC 58.712 50.000 18.09 0.00 41.15 2.17
365 3964 2.926329 ACCATGGGGGAGTGTAAATTCT 59.074 45.455 18.09 0.00 41.15 2.40
366 3965 3.053619 ACCATGGGGGAGTGTAAATTCTC 60.054 47.826 18.09 0.00 41.15 2.87
367 3966 3.206150 CATGGGGGAGTGTAAATTCTCG 58.794 50.000 0.00 0.00 0.00 4.04
368 3967 2.542550 TGGGGGAGTGTAAATTCTCGA 58.457 47.619 0.00 0.00 0.00 4.04
369 3968 2.500098 TGGGGGAGTGTAAATTCTCGAG 59.500 50.000 5.93 5.93 0.00 4.04
372 5234 3.194968 GGGGAGTGTAAATTCTCGAGTCA 59.805 47.826 13.13 0.45 0.00 3.41
373 5235 4.174762 GGGAGTGTAAATTCTCGAGTCAC 58.825 47.826 13.13 12.32 0.00 3.67
375 5237 4.082136 GGAGTGTAAATTCTCGAGTCACCT 60.082 45.833 13.13 4.43 0.00 4.00
377 5239 6.197364 AGTGTAAATTCTCGAGTCACCTAG 57.803 41.667 13.13 0.00 0.00 3.02
379 5241 3.528597 AAATTCTCGAGTCACCTAGGC 57.471 47.619 13.13 0.00 0.00 3.93
380 5242 1.404843 ATTCTCGAGTCACCTAGGCC 58.595 55.000 13.13 0.00 0.00 5.19
383 5245 0.671251 CTCGAGTCACCTAGGCCATC 59.329 60.000 9.30 1.10 0.00 3.51
390 5252 1.992557 TCACCTAGGCCATCCAAACTT 59.007 47.619 9.30 0.00 33.74 2.66
393 5255 2.649816 ACCTAGGCCATCCAAACTTTCT 59.350 45.455 9.30 0.00 33.74 2.52
395 5257 2.683211 AGGCCATCCAAACTTTCTGT 57.317 45.000 5.01 0.00 33.74 3.41
398 5260 3.711190 AGGCCATCCAAACTTTCTGTTTT 59.289 39.130 5.01 0.00 45.69 2.43
402 5264 6.454795 GCCATCCAAACTTTCTGTTTTCATA 58.545 36.000 0.00 0.00 45.69 2.15
404 5266 8.250332 GCCATCCAAACTTTCTGTTTTCATATA 58.750 33.333 0.00 0.00 45.69 0.86
457 5369 9.533253 AAATAAACAAGAGAACATTTGACCTTG 57.467 29.630 0.00 0.00 37.57 3.61
458 5370 6.773976 AAACAAGAGAACATTTGACCTTGA 57.226 33.333 0.00 0.00 36.03 3.02
459 5371 6.773976 AACAAGAGAACATTTGACCTTGAA 57.226 33.333 0.00 0.00 36.03 2.69
460 5372 6.773976 ACAAGAGAACATTTGACCTTGAAA 57.226 33.333 0.00 0.00 36.03 2.69
461 5373 6.564328 ACAAGAGAACATTTGACCTTGAAAC 58.436 36.000 0.00 0.00 36.03 2.78
462 5374 6.378280 ACAAGAGAACATTTGACCTTGAAACT 59.622 34.615 0.00 0.00 36.03 2.66
463 5375 6.382869 AGAGAACATTTGACCTTGAAACTG 57.617 37.500 0.00 0.00 0.00 3.16
464 5376 4.936891 AGAACATTTGACCTTGAAACTGC 58.063 39.130 0.00 0.00 0.00 4.40
465 5377 4.402155 AGAACATTTGACCTTGAAACTGCA 59.598 37.500 0.00 0.00 0.00 4.41
466 5378 4.311816 ACATTTGACCTTGAAACTGCAG 57.688 40.909 13.48 13.48 0.00 4.41
467 5379 2.869233 TTTGACCTTGAAACTGCAGC 57.131 45.000 15.27 0.00 0.00 5.25
468 5380 2.057137 TTGACCTTGAAACTGCAGCT 57.943 45.000 15.27 0.00 0.00 4.24
469 5381 1.597742 TGACCTTGAAACTGCAGCTC 58.402 50.000 15.27 11.59 0.00 4.09
470 5382 0.514691 GACCTTGAAACTGCAGCTCG 59.485 55.000 15.27 1.20 0.00 5.03
471 5383 0.106708 ACCTTGAAACTGCAGCTCGA 59.893 50.000 15.27 9.79 0.00 4.04
472 5384 0.795085 CCTTGAAACTGCAGCTCGAG 59.205 55.000 15.27 18.36 0.00 4.04
473 5385 0.165511 CTTGAAACTGCAGCTCGAGC 59.834 55.000 30.01 30.01 42.49 5.03
474 5386 1.230635 TTGAAACTGCAGCTCGAGCC 61.231 55.000 32.94 19.49 43.38 4.70
475 5387 1.669115 GAAACTGCAGCTCGAGCCA 60.669 57.895 32.94 22.93 43.38 4.75
476 5388 1.633852 GAAACTGCAGCTCGAGCCAG 61.634 60.000 32.94 31.40 43.38 4.85
477 5389 2.388890 AAACTGCAGCTCGAGCCAGT 62.389 55.000 31.39 31.39 42.53 4.00
478 5390 1.536073 AACTGCAGCTCGAGCCAGTA 61.536 55.000 34.59 25.80 40.80 2.74
479 5391 1.326213 ACTGCAGCTCGAGCCAGTAT 61.326 55.000 33.98 19.15 40.21 2.12
480 5392 0.179089 CTGCAGCTCGAGCCAGTATT 60.179 55.000 32.94 11.52 43.38 1.89
481 5393 0.460811 TGCAGCTCGAGCCAGTATTG 60.461 55.000 32.94 23.43 43.38 1.90
482 5394 1.770085 GCAGCTCGAGCCAGTATTGC 61.770 60.000 32.94 28.50 43.38 3.56
483 5395 0.179089 CAGCTCGAGCCAGTATTGCT 60.179 55.000 32.94 9.10 43.38 3.91
491 5403 3.533606 AGCCAGTATTGCTCAGTGTAG 57.466 47.619 0.00 0.00 32.41 2.74
492 5404 2.834549 AGCCAGTATTGCTCAGTGTAGT 59.165 45.455 0.00 0.00 32.41 2.73
493 5405 4.023980 AGCCAGTATTGCTCAGTGTAGTA 58.976 43.478 0.00 0.00 32.41 1.82
494 5406 4.113354 GCCAGTATTGCTCAGTGTAGTAC 58.887 47.826 0.00 0.00 0.00 2.73
495 5407 4.352039 CCAGTATTGCTCAGTGTAGTACG 58.648 47.826 0.00 0.00 30.99 3.67
496 5408 4.142447 CCAGTATTGCTCAGTGTAGTACGT 60.142 45.833 0.00 0.00 30.99 3.57
497 5409 4.793731 CAGTATTGCTCAGTGTAGTACGTG 59.206 45.833 0.00 0.00 30.99 4.49
498 5410 2.060326 TTGCTCAGTGTAGTACGTGC 57.940 50.000 0.00 0.00 0.00 5.34
499 5411 0.109919 TGCTCAGTGTAGTACGTGCG 60.110 55.000 0.00 0.00 0.00 5.34
500 5412 0.167470 GCTCAGTGTAGTACGTGCGA 59.833 55.000 0.00 0.00 0.00 5.10
501 5413 1.202154 GCTCAGTGTAGTACGTGCGAT 60.202 52.381 0.00 0.00 0.00 4.58
502 5414 2.731341 GCTCAGTGTAGTACGTGCGATT 60.731 50.000 0.00 0.00 0.00 3.34
503 5415 3.499048 CTCAGTGTAGTACGTGCGATTT 58.501 45.455 0.00 0.00 0.00 2.17
504 5416 3.239254 TCAGTGTAGTACGTGCGATTTG 58.761 45.455 0.00 0.00 0.00 2.32
505 5417 2.344441 CAGTGTAGTACGTGCGATTTGG 59.656 50.000 0.00 0.00 0.00 3.28
506 5418 2.229543 AGTGTAGTACGTGCGATTTGGA 59.770 45.455 0.00 0.00 0.00 3.53
507 5419 2.597305 GTGTAGTACGTGCGATTTGGAG 59.403 50.000 0.00 0.00 0.00 3.86
508 5420 2.229543 TGTAGTACGTGCGATTTGGAGT 59.770 45.455 0.00 0.00 0.00 3.85
509 5421 1.992170 AGTACGTGCGATTTGGAGTC 58.008 50.000 0.00 0.00 0.00 3.36
510 5422 0.638746 GTACGTGCGATTTGGAGTCG 59.361 55.000 0.00 0.00 41.77 4.18
511 5423 0.457166 TACGTGCGATTTGGAGTCGG 60.457 55.000 0.00 0.00 39.38 4.79
512 5424 1.736645 CGTGCGATTTGGAGTCGGT 60.737 57.895 0.00 0.00 39.38 4.69
513 5425 1.289109 CGTGCGATTTGGAGTCGGTT 61.289 55.000 0.00 0.00 39.38 4.44
514 5426 0.442699 GTGCGATTTGGAGTCGGTTC 59.557 55.000 0.00 0.00 39.38 3.62
515 5427 0.672401 TGCGATTTGGAGTCGGTTCC 60.672 55.000 0.00 0.00 39.38 3.62
516 5428 1.693083 GCGATTTGGAGTCGGTTCCG 61.693 60.000 4.74 4.74 40.27 4.30
517 5429 0.108992 CGATTTGGAGTCGGTTCCGA 60.109 55.000 10.00 10.00 40.27 4.55
518 5430 1.470979 CGATTTGGAGTCGGTTCCGAT 60.471 52.381 16.87 6.56 40.27 4.18
519 5431 2.223641 CGATTTGGAGTCGGTTCCGATA 60.224 50.000 16.87 2.42 40.27 2.92
520 5432 2.953466 TTTGGAGTCGGTTCCGATAG 57.047 50.000 16.87 0.00 40.27 2.08
538 5450 6.701432 CGATAGGTCGTGTTAGAAAAACTT 57.299 37.500 0.00 0.00 42.78 2.66
539 5451 7.113704 CGATAGGTCGTGTTAGAAAAACTTT 57.886 36.000 0.00 0.00 42.78 2.66
540 5452 7.225397 CGATAGGTCGTGTTAGAAAAACTTTC 58.775 38.462 0.00 0.00 42.78 2.62
541 5453 5.746307 AGGTCGTGTTAGAAAAACTTTCC 57.254 39.130 0.00 0.00 0.00 3.13
542 5454 5.187687 AGGTCGTGTTAGAAAAACTTTCCA 58.812 37.500 0.00 0.00 0.00 3.53
543 5455 5.648960 AGGTCGTGTTAGAAAAACTTTCCAA 59.351 36.000 0.00 0.00 0.00 3.53
544 5456 6.320418 AGGTCGTGTTAGAAAAACTTTCCAAT 59.680 34.615 0.00 0.00 0.00 3.16
545 5457 6.635641 GGTCGTGTTAGAAAAACTTTCCAATC 59.364 38.462 0.00 0.00 0.00 2.67
546 5458 7.190871 GTCGTGTTAGAAAAACTTTCCAATCA 58.809 34.615 0.00 0.00 0.00 2.57
547 5459 7.698970 GTCGTGTTAGAAAAACTTTCCAATCAA 59.301 33.333 0.00 0.00 0.00 2.57
548 5460 7.913297 TCGTGTTAGAAAAACTTTCCAATCAAG 59.087 33.333 0.00 0.00 0.00 3.02
549 5461 7.305993 CGTGTTAGAAAAACTTTCCAATCAAGC 60.306 37.037 0.00 0.00 0.00 4.01
550 5462 6.695278 TGTTAGAAAAACTTTCCAATCAAGCG 59.305 34.615 0.00 0.00 0.00 4.68
551 5463 5.514274 AGAAAAACTTTCCAATCAAGCGA 57.486 34.783 0.00 0.00 0.00 4.93
552 5464 5.281727 AGAAAAACTTTCCAATCAAGCGAC 58.718 37.500 0.00 0.00 0.00 5.19
553 5465 3.643159 AAACTTTCCAATCAAGCGACC 57.357 42.857 0.00 0.00 0.00 4.79
554 5466 2.270352 ACTTTCCAATCAAGCGACCA 57.730 45.000 0.00 0.00 0.00 4.02
555 5467 2.154462 ACTTTCCAATCAAGCGACCAG 58.846 47.619 0.00 0.00 0.00 4.00
556 5468 2.154462 CTTTCCAATCAAGCGACCAGT 58.846 47.619 0.00 0.00 0.00 4.00
557 5469 2.270352 TTCCAATCAAGCGACCAGTT 57.730 45.000 0.00 0.00 0.00 3.16
558 5470 2.270352 TCCAATCAAGCGACCAGTTT 57.730 45.000 0.00 0.00 0.00 2.66
559 5471 1.879380 TCCAATCAAGCGACCAGTTTG 59.121 47.619 0.00 0.00 41.62 2.93
560 5472 1.608590 CCAATCAAGCGACCAGTTTGT 59.391 47.619 0.00 0.00 41.13 2.83
561 5473 2.811431 CCAATCAAGCGACCAGTTTGTA 59.189 45.455 0.00 0.00 41.13 2.41
562 5474 3.440173 CCAATCAAGCGACCAGTTTGTAT 59.560 43.478 0.00 0.00 41.13 2.29
563 5475 4.437390 CCAATCAAGCGACCAGTTTGTATC 60.437 45.833 0.00 0.00 41.13 2.24
564 5476 2.695359 TCAAGCGACCAGTTTGTATCC 58.305 47.619 0.00 0.00 41.13 2.59
565 5477 1.393539 CAAGCGACCAGTTTGTATCCG 59.606 52.381 0.00 0.00 36.48 4.18
566 5478 0.108329 AGCGACCAGTTTGTATCCGG 60.108 55.000 0.00 0.00 0.00 5.14
567 5479 0.108520 GCGACCAGTTTGTATCCGGA 60.109 55.000 6.61 6.61 0.00 5.14
568 5480 1.472728 GCGACCAGTTTGTATCCGGAT 60.473 52.381 22.95 22.95 0.00 4.18
569 5481 2.470821 CGACCAGTTTGTATCCGGATC 58.529 52.381 23.08 13.29 0.00 3.36
570 5482 2.802057 CGACCAGTTTGTATCCGGATCC 60.802 54.545 23.08 10.84 0.00 3.36
571 5483 2.169769 GACCAGTTTGTATCCGGATCCA 59.830 50.000 23.08 14.06 0.00 3.41
572 5484 2.574369 ACCAGTTTGTATCCGGATCCAA 59.426 45.455 23.08 20.04 0.00 3.53
573 5485 2.943033 CCAGTTTGTATCCGGATCCAAC 59.057 50.000 23.08 20.44 0.00 3.77
574 5486 3.370527 CCAGTTTGTATCCGGATCCAACT 60.371 47.826 23.08 22.23 0.00 3.16
575 5487 3.871594 CAGTTTGTATCCGGATCCAACTC 59.128 47.826 23.08 16.51 0.00 3.01
576 5488 3.118371 AGTTTGTATCCGGATCCAACTCC 60.118 47.826 23.08 12.06 0.00 3.85
577 5489 2.168458 TGTATCCGGATCCAACTCCA 57.832 50.000 23.08 4.69 34.78 3.86
578 5490 2.473070 TGTATCCGGATCCAACTCCAA 58.527 47.619 23.08 0.00 34.78 3.53
579 5491 3.045634 TGTATCCGGATCCAACTCCAAT 58.954 45.455 23.08 0.00 34.78 3.16
580 5492 2.938956 ATCCGGATCCAACTCCAATC 57.061 50.000 12.38 0.00 34.78 2.67
581 5493 0.464036 TCCGGATCCAACTCCAATCG 59.536 55.000 13.41 0.00 34.78 3.34
582 5494 0.464036 CCGGATCCAACTCCAATCGA 59.536 55.000 13.41 0.00 34.78 3.59
583 5495 1.070758 CCGGATCCAACTCCAATCGAT 59.929 52.381 13.41 0.00 34.78 3.59
584 5496 2.485479 CCGGATCCAACTCCAATCGATT 60.485 50.000 13.41 4.39 34.78 3.34
585 5497 2.545526 CGGATCCAACTCCAATCGATTG 59.454 50.000 27.66 27.66 34.78 2.67
586 5498 3.545703 GGATCCAACTCCAATCGATTGT 58.454 45.455 30.71 14.44 36.06 2.71
587 5499 3.313526 GGATCCAACTCCAATCGATTGTG 59.686 47.826 30.71 24.88 36.06 3.33
588 5500 2.083774 TCCAACTCCAATCGATTGTGC 58.916 47.619 30.71 0.00 36.06 4.57
589 5501 1.811965 CCAACTCCAATCGATTGTGCA 59.188 47.619 30.71 16.54 36.06 4.57
590 5502 2.424601 CCAACTCCAATCGATTGTGCAT 59.575 45.455 30.71 15.28 36.06 3.96
591 5503 3.627123 CCAACTCCAATCGATTGTGCATA 59.373 43.478 30.71 13.50 36.06 3.14
592 5504 4.276678 CCAACTCCAATCGATTGTGCATAT 59.723 41.667 30.71 13.14 36.06 1.78
593 5505 5.446709 CAACTCCAATCGATTGTGCATATC 58.553 41.667 30.71 0.00 36.06 1.63
594 5506 4.965814 ACTCCAATCGATTGTGCATATCT 58.034 39.130 30.71 8.62 36.06 1.98
595 5507 5.371526 ACTCCAATCGATTGTGCATATCTT 58.628 37.500 30.71 8.04 36.06 2.40
596 5508 5.824624 ACTCCAATCGATTGTGCATATCTTT 59.175 36.000 30.71 7.45 36.06 2.52
597 5509 6.017605 ACTCCAATCGATTGTGCATATCTTTC 60.018 38.462 30.71 0.00 36.06 2.62
598 5510 5.239306 TCCAATCGATTGTGCATATCTTTCC 59.761 40.000 30.71 0.00 36.06 3.13
599 5511 5.455392 CAATCGATTGTGCATATCTTTCCC 58.545 41.667 26.58 0.00 33.22 3.97
600 5512 4.422073 TCGATTGTGCATATCTTTCCCT 57.578 40.909 9.30 0.00 0.00 4.20
601 5513 5.545063 TCGATTGTGCATATCTTTCCCTA 57.455 39.130 9.30 0.00 0.00 3.53
790 6290 3.504520 GTCCGAGCAAATTTGGGTAAAGA 59.495 43.478 19.47 2.34 0.00 2.52
1192 6694 2.205022 CCATCAAGGGCTTCTTCACA 57.795 50.000 0.00 0.00 32.41 3.58
2015 7952 5.211201 CCCCTGAAATTTGACCCATCTATT 58.789 41.667 0.00 0.00 0.00 1.73
2016 7953 5.302823 CCCCTGAAATTTGACCCATCTATTC 59.697 44.000 0.00 0.00 0.00 1.75
2017 7954 5.302823 CCCTGAAATTTGACCCATCTATTCC 59.697 44.000 0.00 0.00 0.00 3.01
2018 7955 5.009010 CCTGAAATTTGACCCATCTATTCCG 59.991 44.000 0.00 0.00 0.00 4.30
2019 7956 4.887071 TGAAATTTGACCCATCTATTCCGG 59.113 41.667 0.00 0.00 0.00 5.14
2020 7957 4.788925 AATTTGACCCATCTATTCCGGA 57.211 40.909 0.00 0.00 0.00 5.14
2021 7958 5.324832 AATTTGACCCATCTATTCCGGAT 57.675 39.130 4.15 0.00 0.00 4.18
2022 7959 3.769739 TTGACCCATCTATTCCGGATG 57.230 47.619 4.15 0.00 39.94 3.51
2023 7960 1.347707 TGACCCATCTATTCCGGATGC 59.652 52.381 4.15 0.00 39.19 3.91
2024 7961 1.625818 GACCCATCTATTCCGGATGCT 59.374 52.381 4.15 0.00 39.19 3.79
2025 7962 2.039084 GACCCATCTATTCCGGATGCTT 59.961 50.000 4.15 0.00 39.19 3.91
2026 7963 2.039084 ACCCATCTATTCCGGATGCTTC 59.961 50.000 4.15 0.00 39.19 3.86
2027 7964 2.304180 CCCATCTATTCCGGATGCTTCT 59.696 50.000 4.15 0.00 39.19 2.85
2028 7965 3.244700 CCCATCTATTCCGGATGCTTCTT 60.245 47.826 4.15 0.00 39.19 2.52
2029 7966 3.750130 CCATCTATTCCGGATGCTTCTTG 59.250 47.826 4.15 0.00 39.19 3.02
2030 7967 3.475566 TCTATTCCGGATGCTTCTTGG 57.524 47.619 4.15 2.78 0.00 3.61
2031 7968 2.771943 TCTATTCCGGATGCTTCTTGGT 59.228 45.455 4.15 0.00 0.00 3.67
2032 7969 2.044123 ATTCCGGATGCTTCTTGGTC 57.956 50.000 4.15 0.00 0.00 4.02
2033 7970 0.984230 TTCCGGATGCTTCTTGGTCT 59.016 50.000 4.15 0.00 0.00 3.85
2034 7971 0.984230 TCCGGATGCTTCTTGGTCTT 59.016 50.000 0.00 0.00 0.00 3.01
2035 7972 1.351017 TCCGGATGCTTCTTGGTCTTT 59.649 47.619 0.00 0.00 0.00 2.52
2036 7973 1.470098 CCGGATGCTTCTTGGTCTTTG 59.530 52.381 0.00 0.00 0.00 2.77
2037 7974 1.470098 CGGATGCTTCTTGGTCTTTGG 59.530 52.381 0.00 0.00 0.00 3.28
2038 7975 2.795329 GGATGCTTCTTGGTCTTTGGA 58.205 47.619 0.00 0.00 0.00 3.53
2039 7976 3.157087 GGATGCTTCTTGGTCTTTGGAA 58.843 45.455 0.00 0.00 0.00 3.53
2040 7977 3.766051 GGATGCTTCTTGGTCTTTGGAAT 59.234 43.478 0.00 0.00 0.00 3.01
2041 7978 4.142293 GGATGCTTCTTGGTCTTTGGAATC 60.142 45.833 0.00 0.00 0.00 2.52
2042 7979 4.104383 TGCTTCTTGGTCTTTGGAATCT 57.896 40.909 0.00 0.00 0.00 2.40
2043 7980 4.074970 TGCTTCTTGGTCTTTGGAATCTC 58.925 43.478 0.00 0.00 0.00 2.75
2044 7981 3.441922 GCTTCTTGGTCTTTGGAATCTCC 59.558 47.826 0.00 0.00 36.96 3.71
2045 7982 4.655963 CTTCTTGGTCTTTGGAATCTCCA 58.344 43.478 0.00 0.00 46.61 3.86
2061 7998 6.452494 AATCTCCAGATTCATTGCTTCTTG 57.548 37.500 0.00 0.00 40.49 3.02
2062 7999 4.267536 TCTCCAGATTCATTGCTTCTTGG 58.732 43.478 0.00 0.00 0.00 3.61
2063 8000 4.015084 CTCCAGATTCATTGCTTCTTGGT 58.985 43.478 0.00 0.00 0.00 3.67
2064 8001 4.012374 TCCAGATTCATTGCTTCTTGGTC 58.988 43.478 0.00 0.00 0.00 4.02
2065 8002 4.015084 CCAGATTCATTGCTTCTTGGTCT 58.985 43.478 0.00 0.00 0.00 3.85
2066 8003 4.461781 CCAGATTCATTGCTTCTTGGTCTT 59.538 41.667 0.00 0.00 0.00 3.01
2067 8004 5.047519 CCAGATTCATTGCTTCTTGGTCTTT 60.048 40.000 0.00 0.00 0.00 2.52
2068 8005 6.151648 CCAGATTCATTGCTTCTTGGTCTTTA 59.848 38.462 0.00 0.00 0.00 1.85
2069 8006 7.147949 CCAGATTCATTGCTTCTTGGTCTTTAT 60.148 37.037 0.00 0.00 0.00 1.40
2070 8007 8.248945 CAGATTCATTGCTTCTTGGTCTTTATT 58.751 33.333 0.00 0.00 0.00 1.40
2071 8008 8.810041 AGATTCATTGCTTCTTGGTCTTTATTT 58.190 29.630 0.00 0.00 0.00 1.40
2072 8009 9.428097 GATTCATTGCTTCTTGGTCTTTATTTT 57.572 29.630 0.00 0.00 0.00 1.82
2073 8010 8.592105 TTCATTGCTTCTTGGTCTTTATTTTG 57.408 30.769 0.00 0.00 0.00 2.44
2074 8011 7.725251 TCATTGCTTCTTGGTCTTTATTTTGT 58.275 30.769 0.00 0.00 0.00 2.83
2075 8012 8.203485 TCATTGCTTCTTGGTCTTTATTTTGTT 58.797 29.630 0.00 0.00 0.00 2.83
2076 8013 7.769272 TTGCTTCTTGGTCTTTATTTTGTTG 57.231 32.000 0.00 0.00 0.00 3.33
2077 8014 6.279882 TGCTTCTTGGTCTTTATTTTGTTGG 58.720 36.000 0.00 0.00 0.00 3.77
2078 8015 6.127196 TGCTTCTTGGTCTTTATTTTGTTGGT 60.127 34.615 0.00 0.00 0.00 3.67
2079 8016 6.200854 GCTTCTTGGTCTTTATTTTGTTGGTG 59.799 38.462 0.00 0.00 0.00 4.17
2080 8017 7.411486 TTCTTGGTCTTTATTTTGTTGGTGA 57.589 32.000 0.00 0.00 0.00 4.02
2081 8018 7.411486 TCTTGGTCTTTATTTTGTTGGTGAA 57.589 32.000 0.00 0.00 0.00 3.18
2082 8019 8.017418 TCTTGGTCTTTATTTTGTTGGTGAAT 57.983 30.769 0.00 0.00 0.00 2.57
2083 8020 9.137459 TCTTGGTCTTTATTTTGTTGGTGAATA 57.863 29.630 0.00 0.00 0.00 1.75
2084 8021 9.757227 CTTGGTCTTTATTTTGTTGGTGAATAA 57.243 29.630 0.00 0.00 0.00 1.40
2094 8031 7.938563 TTTGTTGGTGAATAAATTGTAGTGC 57.061 32.000 0.00 0.00 0.00 4.40
2095 8032 6.641169 TGTTGGTGAATAAATTGTAGTGCA 57.359 33.333 0.00 0.00 0.00 4.57
2096 8033 6.676950 TGTTGGTGAATAAATTGTAGTGCAG 58.323 36.000 0.00 0.00 0.00 4.41
2097 8034 6.264292 TGTTGGTGAATAAATTGTAGTGCAGT 59.736 34.615 0.00 0.00 0.00 4.40
2098 8035 7.445707 TGTTGGTGAATAAATTGTAGTGCAGTA 59.554 33.333 0.00 0.00 0.00 2.74
2099 8036 7.987750 TGGTGAATAAATTGTAGTGCAGTAA 57.012 32.000 1.96 0.00 0.00 2.24
2100 8037 8.397575 TGGTGAATAAATTGTAGTGCAGTAAA 57.602 30.769 1.96 0.00 0.00 2.01
2101 8038 9.019656 TGGTGAATAAATTGTAGTGCAGTAAAT 57.980 29.630 1.96 3.41 0.00 1.40
2109 8046 8.615878 AATTGTAGTGCAGTAAATAACACAGA 57.384 30.769 1.96 0.00 35.47 3.41
2110 8047 8.615878 ATTGTAGTGCAGTAAATAACACAGAA 57.384 30.769 1.96 0.00 35.47 3.02
2111 8048 8.615878 TTGTAGTGCAGTAAATAACACAGAAT 57.384 30.769 1.96 0.00 35.47 2.40
2112 8049 8.028540 TGTAGTGCAGTAAATAACACAGAATG 57.971 34.615 1.96 0.00 46.00 2.67
2113 8050 6.500684 AGTGCAGTAAATAACACAGAATGG 57.499 37.500 0.00 0.00 43.62 3.16
2114 8051 6.237901 AGTGCAGTAAATAACACAGAATGGA 58.762 36.000 0.00 0.00 43.62 3.41
2115 8052 6.886459 AGTGCAGTAAATAACACAGAATGGAT 59.114 34.615 0.00 0.00 43.62 3.41
2116 8053 7.066284 AGTGCAGTAAATAACACAGAATGGATC 59.934 37.037 0.00 0.00 43.62 3.36
2117 8054 6.883756 TGCAGTAAATAACACAGAATGGATCA 59.116 34.615 0.00 0.00 43.62 2.92
2118 8055 7.066163 TGCAGTAAATAACACAGAATGGATCAG 59.934 37.037 0.00 0.00 43.62 2.90
2119 8056 7.280876 GCAGTAAATAACACAGAATGGATCAGA 59.719 37.037 0.00 0.00 43.62 3.27
2120 8057 8.824781 CAGTAAATAACACAGAATGGATCAGAG 58.175 37.037 0.00 0.00 43.62 3.35
2121 8058 8.543774 AGTAAATAACACAGAATGGATCAGAGT 58.456 33.333 0.00 0.00 43.62 3.24
2122 8059 7.621428 AAATAACACAGAATGGATCAGAGTG 57.379 36.000 0.00 0.00 43.62 3.51
2123 8060 4.897509 AACACAGAATGGATCAGAGTGA 57.102 40.909 0.00 0.00 43.62 3.41
2124 8061 4.199432 ACACAGAATGGATCAGAGTGAC 57.801 45.455 0.00 0.00 43.62 3.67
2125 8062 3.837146 ACACAGAATGGATCAGAGTGACT 59.163 43.478 0.00 0.00 43.62 3.41
2126 8063 4.285517 ACACAGAATGGATCAGAGTGACTT 59.714 41.667 0.00 0.00 43.62 3.01
2127 8064 4.630505 CACAGAATGGATCAGAGTGACTTG 59.369 45.833 0.00 0.00 43.62 3.16
2128 8065 3.622163 CAGAATGGATCAGAGTGACTTGC 59.378 47.826 0.00 0.00 0.00 4.01
2129 8066 2.306341 ATGGATCAGAGTGACTTGCG 57.694 50.000 0.00 0.00 0.00 4.85
2130 8067 1.256812 TGGATCAGAGTGACTTGCGA 58.743 50.000 0.00 0.00 0.00 5.10
2131 8068 1.827344 TGGATCAGAGTGACTTGCGAT 59.173 47.619 0.00 0.00 0.00 4.58
2132 8069 2.234661 TGGATCAGAGTGACTTGCGATT 59.765 45.455 0.00 0.00 0.00 3.34
2133 8070 3.265791 GGATCAGAGTGACTTGCGATTT 58.734 45.455 0.00 0.00 0.00 2.17
2134 8071 3.686726 GGATCAGAGTGACTTGCGATTTT 59.313 43.478 0.00 0.00 0.00 1.82
2135 8072 4.154918 GGATCAGAGTGACTTGCGATTTTT 59.845 41.667 0.00 0.00 0.00 1.94
2189 8126 8.786826 TTTCAATTAGACATCGGATGTTTAGT 57.213 30.769 23.40 16.02 45.03 2.24
2190 8127 7.770801 TCAATTAGACATCGGATGTTTAGTG 57.229 36.000 23.40 20.36 45.03 2.74
2191 8128 7.327975 TCAATTAGACATCGGATGTTTAGTGT 58.672 34.615 23.40 10.18 45.03 3.55
2192 8129 8.471609 TCAATTAGACATCGGATGTTTAGTGTA 58.528 33.333 23.40 8.75 45.03 2.90
2193 8130 9.261180 CAATTAGACATCGGATGTTTAGTGTAT 57.739 33.333 23.40 10.46 45.03 2.29
2195 8132 8.867112 TTAGACATCGGATGTTTAGTGTATTC 57.133 34.615 23.40 7.85 45.03 1.75
2197 8134 8.234136 AGACATCGGATGTTTAGTGTATTCTA 57.766 34.615 23.40 0.00 45.03 2.10
2205 8142 9.431887 GGATGTTTAGTGTATTCTACAAACTGA 57.568 33.333 0.00 0.00 40.93 3.41
2207 8144 9.998106 ATGTTTAGTGTATTCTACAAACTGACT 57.002 29.630 0.00 0.00 40.93 3.41
2210 8147 5.853936 AGTGTATTCTACAAACTGACTGCA 58.146 37.500 0.00 0.00 40.93 4.41
2212 8149 5.120830 GTGTATTCTACAAACTGACTGCAGG 59.879 44.000 19.93 2.38 42.54 4.85
2228 8165 2.442212 CAGGCATGCAACATTGTTGA 57.558 45.000 29.04 16.18 0.00 3.18
2229 8166 2.756829 CAGGCATGCAACATTGTTGAA 58.243 42.857 29.04 21.53 0.00 2.69
2230 8167 2.734606 CAGGCATGCAACATTGTTGAAG 59.265 45.455 29.04 18.66 0.00 3.02
2231 8168 2.070783 GGCATGCAACATTGTTGAAGG 58.929 47.619 29.04 22.70 0.00 3.46
2232 8169 2.070783 GCATGCAACATTGTTGAAGGG 58.929 47.619 29.04 17.55 0.00 3.95
2234 8171 1.117994 TGCAACATTGTTGAAGGGCA 58.882 45.000 29.04 17.96 0.00 5.36
2235 8172 1.483827 TGCAACATTGTTGAAGGGCAA 59.516 42.857 29.04 5.57 0.00 4.52
2236 8173 2.093288 TGCAACATTGTTGAAGGGCAAA 60.093 40.909 29.04 4.65 38.44 3.68
2237 8174 2.545106 GCAACATTGTTGAAGGGCAAAG 59.455 45.455 29.04 3.19 38.44 2.77
2238 8175 3.132925 CAACATTGTTGAAGGGCAAAGG 58.867 45.455 22.28 0.00 38.44 3.11
2239 8176 2.397597 ACATTGTTGAAGGGCAAAGGT 58.602 42.857 0.00 0.00 38.44 3.50
2240 8177 3.571590 ACATTGTTGAAGGGCAAAGGTA 58.428 40.909 0.00 0.00 38.44 3.08
2241 8178 3.320826 ACATTGTTGAAGGGCAAAGGTAC 59.679 43.478 0.00 0.00 38.44 3.34
2243 8180 2.858745 TGTTGAAGGGCAAAGGTACTC 58.141 47.619 0.00 0.00 38.49 2.59
2244 8181 2.441750 TGTTGAAGGGCAAAGGTACTCT 59.558 45.455 0.00 0.00 38.49 3.24
2246 8183 4.103469 TGTTGAAGGGCAAAGGTACTCTAA 59.897 41.667 0.00 0.00 38.49 2.10
2247 8184 4.553330 TGAAGGGCAAAGGTACTCTAAG 57.447 45.455 0.00 0.00 38.49 2.18
2248 8185 4.164981 TGAAGGGCAAAGGTACTCTAAGA 58.835 43.478 0.00 0.00 38.49 2.10
2249 8186 4.595781 TGAAGGGCAAAGGTACTCTAAGAA 59.404 41.667 0.00 0.00 38.49 2.52
2250 8187 4.828072 AGGGCAAAGGTACTCTAAGAAG 57.172 45.455 0.00 0.00 38.49 2.85
2251 8188 3.055021 AGGGCAAAGGTACTCTAAGAAGC 60.055 47.826 0.00 0.00 38.49 3.86
2252 8189 3.055021 GGGCAAAGGTACTCTAAGAAGCT 60.055 47.826 0.00 0.00 38.49 3.74
2255 8192 5.238583 GCAAAGGTACTCTAAGAAGCTGAA 58.761 41.667 0.00 0.00 38.49 3.02
2256 8193 5.877564 GCAAAGGTACTCTAAGAAGCTGAAT 59.122 40.000 0.00 0.00 38.49 2.57
2257 8194 6.183360 GCAAAGGTACTCTAAGAAGCTGAATG 60.183 42.308 0.00 0.00 38.49 2.67
2259 8196 7.430760 AAGGTACTCTAAGAAGCTGAATGAT 57.569 36.000 0.00 0.00 38.49 2.45
2260 8197 8.540507 AAGGTACTCTAAGAAGCTGAATGATA 57.459 34.615 0.00 0.00 38.49 2.15
2261 8198 8.540507 AGGTACTCTAAGAAGCTGAATGATAA 57.459 34.615 0.00 0.00 0.00 1.75
2262 8199 8.982723 AGGTACTCTAAGAAGCTGAATGATAAA 58.017 33.333 0.00 0.00 0.00 1.40
2264 8201 9.587772 GTACTCTAAGAAGCTGAATGATAAACA 57.412 33.333 0.00 0.00 0.00 2.83
2266 8203 7.768120 ACTCTAAGAAGCTGAATGATAAACAGG 59.232 37.037 0.00 0.00 33.00 4.00
2267 8204 7.624549 TCTAAGAAGCTGAATGATAAACAGGT 58.375 34.615 0.00 0.00 42.75 4.00
2268 8205 6.749923 AAGAAGCTGAATGATAAACAGGTC 57.250 37.500 0.00 0.00 40.62 3.85
2270 8207 5.645497 AGAAGCTGAATGATAAACAGGTCAC 59.355 40.000 0.00 0.00 40.62 3.67
2271 8208 4.265073 AGCTGAATGATAAACAGGTCACC 58.735 43.478 0.00 0.00 37.77 4.02
2272 8209 4.009675 GCTGAATGATAAACAGGTCACCA 58.990 43.478 0.00 0.00 33.00 4.17
2274 8211 5.619981 GCTGAATGATAAACAGGTCACCAAC 60.620 44.000 0.00 0.00 33.00 3.77
2275 8212 5.380900 TGAATGATAAACAGGTCACCAACA 58.619 37.500 0.00 0.00 0.00 3.33
2276 8213 6.009589 TGAATGATAAACAGGTCACCAACAT 58.990 36.000 0.00 0.00 0.00 2.71
2277 8214 7.171653 TGAATGATAAACAGGTCACCAACATA 58.828 34.615 0.00 0.00 0.00 2.29
2278 8215 7.120579 TGAATGATAAACAGGTCACCAACATAC 59.879 37.037 0.00 0.00 0.00 2.39
2279 8216 6.121776 TGATAAACAGGTCACCAACATACT 57.878 37.500 0.00 0.00 0.00 2.12
2281 8218 7.681679 TGATAAACAGGTCACCAACATACTTA 58.318 34.615 0.00 0.00 0.00 2.24
2282 8219 7.822334 TGATAAACAGGTCACCAACATACTTAG 59.178 37.037 0.00 0.00 0.00 2.18
2283 8220 5.818678 AACAGGTCACCAACATACTTAGA 57.181 39.130 0.00 0.00 0.00 2.10
2284 8221 5.407407 ACAGGTCACCAACATACTTAGAG 57.593 43.478 0.00 0.00 0.00 2.43
2285 8222 4.184629 CAGGTCACCAACATACTTAGAGC 58.815 47.826 0.00 0.00 0.00 4.09
2287 8224 4.532521 AGGTCACCAACATACTTAGAGCTT 59.467 41.667 0.00 0.00 0.00 3.74
2288 8225 4.870991 GGTCACCAACATACTTAGAGCTTC 59.129 45.833 0.00 0.00 0.00 3.86
2289 8226 4.870991 GTCACCAACATACTTAGAGCTTCC 59.129 45.833 0.00 0.00 0.00 3.46
2290 8227 4.777896 TCACCAACATACTTAGAGCTTCCT 59.222 41.667 0.00 0.00 0.00 3.36
2291 8228 5.248477 TCACCAACATACTTAGAGCTTCCTT 59.752 40.000 0.00 0.00 0.00 3.36
2292 8229 5.352569 CACCAACATACTTAGAGCTTCCTTG 59.647 44.000 0.00 0.00 0.00 3.61
2293 8230 4.878397 CCAACATACTTAGAGCTTCCTTGG 59.122 45.833 0.00 0.00 0.00 3.61
2294 8231 4.762289 ACATACTTAGAGCTTCCTTGGG 57.238 45.455 0.00 0.00 0.00 4.12
2298 8235 3.756117 ACTTAGAGCTTCCTTGGGTTTG 58.244 45.455 0.00 0.00 0.00 2.93
2299 8236 3.138468 ACTTAGAGCTTCCTTGGGTTTGT 59.862 43.478 0.00 0.00 0.00 2.83
2300 8237 1.986882 AGAGCTTCCTTGGGTTTGTG 58.013 50.000 0.00 0.00 0.00 3.33
2301 8238 0.961753 GAGCTTCCTTGGGTTTGTGG 59.038 55.000 0.00 0.00 0.00 4.17
2303 8240 0.961753 GCTTCCTTGGGTTTGTGGAG 59.038 55.000 0.00 0.00 0.00 3.86
2304 8241 1.620822 CTTCCTTGGGTTTGTGGAGG 58.379 55.000 0.00 0.00 0.00 4.30
2305 8242 1.144913 CTTCCTTGGGTTTGTGGAGGA 59.855 52.381 0.00 0.00 34.83 3.71
2306 8243 0.476771 TCCTTGGGTTTGTGGAGGAC 59.523 55.000 0.00 0.00 31.82 3.85
2307 8244 0.184933 CCTTGGGTTTGTGGAGGACA 59.815 55.000 0.00 0.00 0.00 4.02
2309 8246 1.888512 CTTGGGTTTGTGGAGGACATG 59.111 52.381 0.00 0.00 33.40 3.21
2310 8247 0.850100 TGGGTTTGTGGAGGACATGT 59.150 50.000 0.00 0.00 33.40 3.21
2311 8248 1.202879 TGGGTTTGTGGAGGACATGTC 60.203 52.381 17.91 17.91 33.40 3.06
2312 8249 1.073923 GGGTTTGTGGAGGACATGTCT 59.926 52.381 24.50 11.25 33.40 3.41
2313 8250 2.154462 GGTTTGTGGAGGACATGTCTG 58.846 52.381 24.50 0.00 33.40 3.51
2314 8251 2.154462 GTTTGTGGAGGACATGTCTGG 58.846 52.381 24.50 0.00 33.40 3.86
2318 8255 2.224523 TGTGGAGGACATGTCTGGTTTC 60.225 50.000 24.50 13.86 0.00 2.78
2321 8258 2.224523 GGAGGACATGTCTGGTTTCACA 60.225 50.000 24.50 0.00 0.00 3.58
2322 8259 3.476552 GAGGACATGTCTGGTTTCACAA 58.523 45.455 24.50 0.00 0.00 3.33
2324 8261 3.885297 AGGACATGTCTGGTTTCACAAAG 59.115 43.478 24.50 0.00 0.00 2.77
2325 8262 3.632145 GGACATGTCTGGTTTCACAAAGT 59.368 43.478 24.50 0.00 0.00 2.66
2326 8263 4.261197 GGACATGTCTGGTTTCACAAAGTC 60.261 45.833 24.50 0.00 33.87 3.01
2328 8265 4.336433 ACATGTCTGGTTTCACAAAGTCAG 59.664 41.667 0.00 0.00 0.00 3.51
2329 8266 3.950397 TGTCTGGTTTCACAAAGTCAGT 58.050 40.909 0.00 0.00 0.00 3.41
2331 8268 4.764823 TGTCTGGTTTCACAAAGTCAGTTT 59.235 37.500 0.00 0.00 0.00 2.66
2332 8269 5.106317 TGTCTGGTTTCACAAAGTCAGTTTC 60.106 40.000 0.00 0.00 0.00 2.78
2333 8270 5.007034 TCTGGTTTCACAAAGTCAGTTTCA 58.993 37.500 0.00 0.00 0.00 2.69
2335 8272 4.764823 TGGTTTCACAAAGTCAGTTTCACT 59.235 37.500 0.00 0.00 0.00 3.41
2336 8273 5.242838 TGGTTTCACAAAGTCAGTTTCACTT 59.757 36.000 0.00 0.00 35.51 3.16
2338 8275 6.308041 GGTTTCACAAAGTCAGTTTCACTTTC 59.692 38.462 0.00 0.00 41.25 2.62
2339 8276 6.567687 TTCACAAAGTCAGTTTCACTTTCA 57.432 33.333 0.00 0.00 41.25 2.69
2340 8277 5.938322 TCACAAAGTCAGTTTCACTTTCAC 58.062 37.500 0.00 0.00 41.25 3.18
2341 8278 4.788100 CACAAAGTCAGTTTCACTTTCACG 59.212 41.667 0.00 0.00 41.25 4.35
2342 8279 4.693566 ACAAAGTCAGTTTCACTTTCACGA 59.306 37.500 0.00 0.00 41.25 4.35
2343 8280 5.180492 ACAAAGTCAGTTTCACTTTCACGAA 59.820 36.000 0.00 0.00 41.25 3.85
2344 8281 5.470845 AAGTCAGTTTCACTTTCACGAAG 57.529 39.130 0.00 0.00 41.32 3.79
2345 8282 4.755411 AGTCAGTTTCACTTTCACGAAGA 58.245 39.130 0.00 0.00 38.77 2.87
2346 8283 4.567159 AGTCAGTTTCACTTTCACGAAGAC 59.433 41.667 0.00 0.00 38.77 3.01
2347 8284 4.328983 GTCAGTTTCACTTTCACGAAGACA 59.671 41.667 0.00 0.00 38.77 3.41
2352 8289 2.821546 CACTTTCACGAAGACAGTGGA 58.178 47.619 15.96 0.00 46.48 4.02
2353 8290 3.194861 CACTTTCACGAAGACAGTGGAA 58.805 45.455 15.96 0.00 46.48 3.53
2354 8291 3.621268 CACTTTCACGAAGACAGTGGAAA 59.379 43.478 15.96 0.00 46.48 3.13
2355 8292 4.273480 CACTTTCACGAAGACAGTGGAAAT 59.727 41.667 15.96 0.00 46.48 2.17
2357 8294 2.143122 TCACGAAGACAGTGGAAATGC 58.857 47.619 0.00 0.00 39.86 3.56
2359 8296 2.096069 CACGAAGACAGTGGAAATGCAG 60.096 50.000 0.00 0.00 33.50 4.41
2360 8297 2.224281 ACGAAGACAGTGGAAATGCAGA 60.224 45.455 0.00 0.00 33.50 4.26
2363 8300 4.261155 CGAAGACAGTGGAAATGCAGAAAA 60.261 41.667 0.00 0.00 33.50 2.29
2365 8302 5.192327 AGACAGTGGAAATGCAGAAAAAG 57.808 39.130 0.00 0.00 33.50 2.27
2366 8303 4.038402 AGACAGTGGAAATGCAGAAAAAGG 59.962 41.667 0.00 0.00 33.50 3.11
2367 8304 3.960102 ACAGTGGAAATGCAGAAAAAGGA 59.040 39.130 0.00 0.00 33.50 3.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 7.809806 GCAAAGTATATGCCACATCCTATTTTC 59.190 37.037 0.00 0.00 37.85 2.29
25 26 7.219484 GCAAAGTATATGCCACATCCTATTT 57.781 36.000 0.00 0.00 37.85 1.40
26 27 6.824305 GCAAAGTATATGCCACATCCTATT 57.176 37.500 0.00 0.00 37.85 1.73
42 1842 1.862201 CAAACGACACTCGGCAAAGTA 59.138 47.619 0.00 0.00 45.59 2.24
61 1861 0.678684 TACATCACCGAGAGCCGACA 60.679 55.000 0.00 0.00 41.76 4.35
145 3744 1.506718 CTACAGACGCCGAGAGCAA 59.493 57.895 0.00 0.00 44.04 3.91
146 3745 2.407428 CCTACAGACGCCGAGAGCA 61.407 63.158 0.00 0.00 44.04 4.26
156 3755 1.574702 GCACGGCAAACCCTACAGAC 61.575 60.000 0.00 0.00 0.00 3.51
161 3760 3.943691 ACCGCACGGCAAACCCTA 61.944 61.111 9.43 0.00 39.32 3.53
270 3869 4.372656 GAGTGCTAAAACACAGACACTCT 58.627 43.478 12.41 0.00 46.55 3.24
293 3892 1.078848 GGGTGTCATGCTCTTCGCT 60.079 57.895 0.00 0.00 40.11 4.93
301 3900 0.392461 ATGTACACCGGGTGTCATGC 60.392 55.000 34.48 22.14 43.92 4.06
302 3901 1.066502 TGATGTACACCGGGTGTCATG 60.067 52.381 34.48 8.12 43.92 3.07
314 3913 5.187772 AGCACTACTGGAATTCTGATGTACA 59.812 40.000 5.23 0.00 0.00 2.90
321 3920 4.096532 TCGACTAGCACTACTGGAATTCTG 59.903 45.833 5.23 1.62 0.00 3.02
328 3927 1.460504 TGGTCGACTAGCACTACTGG 58.539 55.000 16.46 0.00 0.00 4.00
337 3936 0.397254 ACTCCCCCATGGTCGACTAG 60.397 60.000 16.46 5.52 34.77 2.57
338 3937 0.686441 CACTCCCCCATGGTCGACTA 60.686 60.000 16.46 10.40 34.77 2.59
339 3938 1.990060 CACTCCCCCATGGTCGACT 60.990 63.158 16.46 0.00 34.77 4.18
342 3941 0.616371 TTTACACTCCCCCATGGTCG 59.384 55.000 11.73 0.00 34.77 4.79
345 3944 3.555966 GAGAATTTACACTCCCCCATGG 58.444 50.000 4.14 4.14 0.00 3.66
346 3945 3.118408 TCGAGAATTTACACTCCCCCATG 60.118 47.826 0.00 0.00 0.00 3.66
347 3946 3.112263 TCGAGAATTTACACTCCCCCAT 58.888 45.455 0.00 0.00 0.00 4.00
349 3948 2.500504 ACTCGAGAATTTACACTCCCCC 59.499 50.000 21.68 0.00 0.00 5.40
350 3949 3.194968 TGACTCGAGAATTTACACTCCCC 59.805 47.826 21.68 0.00 0.00 4.81
352 3951 4.082136 AGGTGACTCGAGAATTTACACTCC 60.082 45.833 21.68 9.27 32.90 3.85
353 3952 5.061920 AGGTGACTCGAGAATTTACACTC 57.938 43.478 21.68 3.00 32.90 3.51
355 3954 5.341617 CCTAGGTGACTCGAGAATTTACAC 58.658 45.833 21.68 16.48 43.67 2.90
356 3955 4.142227 GCCTAGGTGACTCGAGAATTTACA 60.142 45.833 21.68 6.30 43.67 2.41
357 3956 4.361420 GCCTAGGTGACTCGAGAATTTAC 58.639 47.826 21.68 9.70 43.67 2.01
358 3957 3.383825 GGCCTAGGTGACTCGAGAATTTA 59.616 47.826 21.68 4.07 43.67 1.40
359 3958 2.168728 GGCCTAGGTGACTCGAGAATTT 59.831 50.000 21.68 0.00 43.67 1.82
360 3959 1.757699 GGCCTAGGTGACTCGAGAATT 59.242 52.381 21.68 0.00 43.67 2.17
361 3960 1.342076 TGGCCTAGGTGACTCGAGAAT 60.342 52.381 21.68 0.00 43.67 2.40
362 3961 0.039180 TGGCCTAGGTGACTCGAGAA 59.961 55.000 21.68 3.67 43.67 2.87
363 3962 0.259065 ATGGCCTAGGTGACTCGAGA 59.741 55.000 21.68 0.00 43.67 4.04
364 3963 0.671251 GATGGCCTAGGTGACTCGAG 59.329 60.000 11.84 11.84 43.67 4.04
365 3964 0.755698 GGATGGCCTAGGTGACTCGA 60.756 60.000 11.31 0.00 43.67 4.04
366 3965 1.043116 TGGATGGCCTAGGTGACTCG 61.043 60.000 11.31 0.00 43.67 4.18
367 3966 1.204146 TTGGATGGCCTAGGTGACTC 58.796 55.000 11.31 2.64 43.67 3.36
369 3968 1.282157 AGTTTGGATGGCCTAGGTGAC 59.718 52.381 11.31 1.87 34.31 3.67
372 5234 2.649816 AGAAAGTTTGGATGGCCTAGGT 59.350 45.455 11.31 0.00 34.31 3.08
373 5235 3.019564 CAGAAAGTTTGGATGGCCTAGG 58.980 50.000 3.67 3.67 34.31 3.02
375 5237 3.806949 ACAGAAAGTTTGGATGGCCTA 57.193 42.857 3.32 0.00 34.31 3.93
432 5344 8.912988 TCAAGGTCAAATGTTCTCTTGTTTATT 58.087 29.630 0.00 0.00 34.82 1.40
433 5345 8.463930 TCAAGGTCAAATGTTCTCTTGTTTAT 57.536 30.769 0.00 0.00 34.82 1.40
436 5348 6.773976 TTCAAGGTCAAATGTTCTCTTGTT 57.226 33.333 0.00 0.00 34.82 2.83
437 5349 6.378280 AGTTTCAAGGTCAAATGTTCTCTTGT 59.622 34.615 0.00 0.00 34.82 3.16
438 5350 6.694411 CAGTTTCAAGGTCAAATGTTCTCTTG 59.306 38.462 0.00 0.00 34.61 3.02
441 5353 4.978580 GCAGTTTCAAGGTCAAATGTTCTC 59.021 41.667 0.00 0.00 0.00 2.87
442 5354 4.402155 TGCAGTTTCAAGGTCAAATGTTCT 59.598 37.500 0.00 0.00 0.00 3.01
443 5355 4.681744 TGCAGTTTCAAGGTCAAATGTTC 58.318 39.130 0.00 0.00 0.00 3.18
444 5356 4.685924 CTGCAGTTTCAAGGTCAAATGTT 58.314 39.130 5.25 0.00 0.00 2.71
445 5357 3.491447 GCTGCAGTTTCAAGGTCAAATGT 60.491 43.478 16.64 0.00 0.00 2.71
446 5358 3.054878 GCTGCAGTTTCAAGGTCAAATG 58.945 45.455 16.64 0.00 0.00 2.32
447 5359 2.961062 AGCTGCAGTTTCAAGGTCAAAT 59.039 40.909 16.64 0.00 0.00 2.32
448 5360 2.358898 GAGCTGCAGTTTCAAGGTCAAA 59.641 45.455 16.64 0.00 0.00 2.69
449 5361 1.949525 GAGCTGCAGTTTCAAGGTCAA 59.050 47.619 16.64 0.00 0.00 3.18
450 5362 1.597742 GAGCTGCAGTTTCAAGGTCA 58.402 50.000 16.64 0.00 0.00 4.02
451 5363 0.514691 CGAGCTGCAGTTTCAAGGTC 59.485 55.000 16.64 2.15 0.00 3.85
452 5364 0.106708 TCGAGCTGCAGTTTCAAGGT 59.893 50.000 16.64 0.00 0.00 3.50
453 5365 0.795085 CTCGAGCTGCAGTTTCAAGG 59.205 55.000 16.64 2.06 0.00 3.61
454 5366 0.165511 GCTCGAGCTGCAGTTTCAAG 59.834 55.000 29.88 9.52 38.21 3.02
455 5367 1.230635 GGCTCGAGCTGCAGTTTCAA 61.231 55.000 34.46 0.00 41.70 2.69
456 5368 1.669115 GGCTCGAGCTGCAGTTTCA 60.669 57.895 34.46 0.00 41.70 2.69
457 5369 1.633852 CTGGCTCGAGCTGCAGTTTC 61.634 60.000 34.46 17.08 41.70 2.78
458 5370 1.670406 CTGGCTCGAGCTGCAGTTT 60.670 57.895 34.46 3.84 41.70 2.66
459 5371 1.536073 TACTGGCTCGAGCTGCAGTT 61.536 55.000 37.20 26.21 41.49 3.16
460 5372 1.326213 ATACTGGCTCGAGCTGCAGT 61.326 55.000 35.53 35.53 42.95 4.40
461 5373 0.179089 AATACTGGCTCGAGCTGCAG 60.179 55.000 34.46 32.09 41.70 4.41
462 5374 0.460811 CAATACTGGCTCGAGCTGCA 60.461 55.000 34.46 23.97 41.70 4.41
463 5375 1.770085 GCAATACTGGCTCGAGCTGC 61.770 60.000 34.46 29.31 41.70 5.25
464 5376 0.179089 AGCAATACTGGCTCGAGCTG 60.179 55.000 34.46 27.72 36.81 4.24
465 5377 2.206635 AGCAATACTGGCTCGAGCT 58.793 52.632 34.46 19.29 36.81 4.09
466 5378 4.844420 AGCAATACTGGCTCGAGC 57.156 55.556 29.38 29.38 36.81 5.03
471 5383 2.834549 ACTACACTGAGCAATACTGGCT 59.165 45.455 0.00 0.00 46.07 4.75
472 5384 3.252974 ACTACACTGAGCAATACTGGC 57.747 47.619 0.00 0.00 0.00 4.85
473 5385 4.142447 ACGTACTACACTGAGCAATACTGG 60.142 45.833 0.00 0.00 0.00 4.00
474 5386 4.793731 CACGTACTACACTGAGCAATACTG 59.206 45.833 0.00 0.00 0.00 2.74
475 5387 4.674623 GCACGTACTACACTGAGCAATACT 60.675 45.833 0.00 0.00 0.00 2.12
476 5388 3.546670 GCACGTACTACACTGAGCAATAC 59.453 47.826 0.00 0.00 0.00 1.89
477 5389 3.729762 CGCACGTACTACACTGAGCAATA 60.730 47.826 0.00 0.00 0.00 1.90
478 5390 2.607187 GCACGTACTACACTGAGCAAT 58.393 47.619 0.00 0.00 0.00 3.56
479 5391 1.664874 CGCACGTACTACACTGAGCAA 60.665 52.381 0.00 0.00 0.00 3.91
480 5392 0.109919 CGCACGTACTACACTGAGCA 60.110 55.000 0.00 0.00 0.00 4.26
481 5393 0.167470 TCGCACGTACTACACTGAGC 59.833 55.000 0.00 0.00 0.00 4.26
482 5394 2.826979 ATCGCACGTACTACACTGAG 57.173 50.000 0.00 0.00 0.00 3.35
483 5395 3.239254 CAAATCGCACGTACTACACTGA 58.761 45.455 0.00 0.00 0.00 3.41
484 5396 2.344441 CCAAATCGCACGTACTACACTG 59.656 50.000 0.00 0.00 0.00 3.66
485 5397 2.229543 TCCAAATCGCACGTACTACACT 59.770 45.455 0.00 0.00 0.00 3.55
486 5398 2.597305 CTCCAAATCGCACGTACTACAC 59.403 50.000 0.00 0.00 0.00 2.90
487 5399 2.229543 ACTCCAAATCGCACGTACTACA 59.770 45.455 0.00 0.00 0.00 2.74
488 5400 2.850647 GACTCCAAATCGCACGTACTAC 59.149 50.000 0.00 0.00 0.00 2.73
489 5401 2.476686 CGACTCCAAATCGCACGTACTA 60.477 50.000 0.00 0.00 31.96 1.82
490 5402 1.731424 CGACTCCAAATCGCACGTACT 60.731 52.381 0.00 0.00 31.96 2.73
491 5403 0.638746 CGACTCCAAATCGCACGTAC 59.361 55.000 0.00 0.00 31.96 3.67
492 5404 0.457166 CCGACTCCAAATCGCACGTA 60.457 55.000 0.00 0.00 38.27 3.57
493 5405 1.736645 CCGACTCCAAATCGCACGT 60.737 57.895 0.00 0.00 38.27 4.49
494 5406 1.289109 AACCGACTCCAAATCGCACG 61.289 55.000 0.00 0.00 38.27 5.34
495 5407 0.442699 GAACCGACTCCAAATCGCAC 59.557 55.000 0.00 0.00 38.27 5.34
496 5408 0.672401 GGAACCGACTCCAAATCGCA 60.672 55.000 0.00 0.00 38.27 5.10
497 5409 1.693083 CGGAACCGACTCCAAATCGC 61.693 60.000 7.53 0.00 42.83 4.58
498 5410 0.108992 TCGGAACCGACTCCAAATCG 60.109 55.000 12.04 0.00 44.01 3.34
499 5411 3.826637 TCGGAACCGACTCCAAATC 57.173 52.632 12.04 0.00 44.01 2.17
516 5428 7.172019 TGGAAAGTTTTTCTAACACGACCTATC 59.828 37.037 0.00 0.00 0.00 2.08
517 5429 6.993902 TGGAAAGTTTTTCTAACACGACCTAT 59.006 34.615 0.00 0.00 0.00 2.57
518 5430 6.347696 TGGAAAGTTTTTCTAACACGACCTA 58.652 36.000 0.00 0.00 0.00 3.08
519 5431 5.187687 TGGAAAGTTTTTCTAACACGACCT 58.812 37.500 0.00 0.00 0.00 3.85
520 5432 5.488645 TGGAAAGTTTTTCTAACACGACC 57.511 39.130 0.00 0.00 0.00 4.79
521 5433 7.190871 TGATTGGAAAGTTTTTCTAACACGAC 58.809 34.615 3.03 0.00 0.00 4.34
522 5434 7.323049 TGATTGGAAAGTTTTTCTAACACGA 57.677 32.000 3.03 0.00 0.00 4.35
523 5435 7.305993 GCTTGATTGGAAAGTTTTTCTAACACG 60.306 37.037 3.03 3.82 0.00 4.49
524 5436 7.305993 CGCTTGATTGGAAAGTTTTTCTAACAC 60.306 37.037 3.03 2.63 0.00 3.32
525 5437 6.695278 CGCTTGATTGGAAAGTTTTTCTAACA 59.305 34.615 3.03 2.31 0.00 2.41
526 5438 6.915843 TCGCTTGATTGGAAAGTTTTTCTAAC 59.084 34.615 3.03 0.00 0.00 2.34
527 5439 6.915843 GTCGCTTGATTGGAAAGTTTTTCTAA 59.084 34.615 3.39 3.39 0.00 2.10
528 5440 6.435428 GTCGCTTGATTGGAAAGTTTTTCTA 58.565 36.000 2.03 0.00 0.00 2.10
529 5441 5.281727 GTCGCTTGATTGGAAAGTTTTTCT 58.718 37.500 2.03 0.00 0.00 2.52
530 5442 4.444388 GGTCGCTTGATTGGAAAGTTTTTC 59.556 41.667 0.00 0.00 0.00 2.29
531 5443 4.142049 TGGTCGCTTGATTGGAAAGTTTTT 60.142 37.500 0.00 0.00 0.00 1.94
532 5444 3.383185 TGGTCGCTTGATTGGAAAGTTTT 59.617 39.130 0.00 0.00 0.00 2.43
533 5445 2.955660 TGGTCGCTTGATTGGAAAGTTT 59.044 40.909 0.00 0.00 0.00 2.66
534 5446 2.554032 CTGGTCGCTTGATTGGAAAGTT 59.446 45.455 0.00 0.00 0.00 2.66
535 5447 2.154462 CTGGTCGCTTGATTGGAAAGT 58.846 47.619 0.00 0.00 0.00 2.66
536 5448 2.154462 ACTGGTCGCTTGATTGGAAAG 58.846 47.619 0.00 0.00 0.00 2.62
537 5449 2.270352 ACTGGTCGCTTGATTGGAAA 57.730 45.000 0.00 0.00 0.00 3.13
538 5450 2.270352 AACTGGTCGCTTGATTGGAA 57.730 45.000 0.00 0.00 0.00 3.53
539 5451 1.879380 CAAACTGGTCGCTTGATTGGA 59.121 47.619 0.00 0.00 0.00 3.53
540 5452 1.608590 ACAAACTGGTCGCTTGATTGG 59.391 47.619 0.00 0.00 0.00 3.16
541 5453 4.437390 GGATACAAACTGGTCGCTTGATTG 60.437 45.833 0.00 0.00 0.00 2.67
542 5454 3.689649 GGATACAAACTGGTCGCTTGATT 59.310 43.478 0.00 0.00 0.00 2.57
543 5455 3.270877 GGATACAAACTGGTCGCTTGAT 58.729 45.455 0.00 0.00 0.00 2.57
544 5456 2.695359 GGATACAAACTGGTCGCTTGA 58.305 47.619 0.00 0.00 0.00 3.02
545 5457 1.393539 CGGATACAAACTGGTCGCTTG 59.606 52.381 0.00 0.00 0.00 4.01
546 5458 1.674817 CCGGATACAAACTGGTCGCTT 60.675 52.381 0.00 0.00 0.00 4.68
547 5459 0.108329 CCGGATACAAACTGGTCGCT 60.108 55.000 0.00 0.00 0.00 4.93
548 5460 0.108520 TCCGGATACAAACTGGTCGC 60.109 55.000 0.00 0.00 35.49 5.19
549 5461 2.470821 GATCCGGATACAAACTGGTCG 58.529 52.381 19.15 0.00 35.49 4.79
550 5462 2.169769 TGGATCCGGATACAAACTGGTC 59.830 50.000 27.66 6.35 35.49 4.02
551 5463 2.193127 TGGATCCGGATACAAACTGGT 58.807 47.619 27.66 0.00 35.49 4.00
552 5464 2.943033 GTTGGATCCGGATACAAACTGG 59.057 50.000 37.88 0.00 42.78 4.00
553 5465 3.871594 GAGTTGGATCCGGATACAAACTG 59.128 47.826 37.88 0.00 42.78 3.16
554 5466 3.118371 GGAGTTGGATCCGGATACAAACT 60.118 47.826 37.88 32.94 42.78 2.66
555 5467 3.203716 GGAGTTGGATCCGGATACAAAC 58.796 50.000 37.88 31.41 42.78 2.93
556 5468 2.841266 TGGAGTTGGATCCGGATACAAA 59.159 45.455 37.88 23.01 42.78 2.83
557 5469 2.473070 TGGAGTTGGATCCGGATACAA 58.527 47.619 33.96 33.96 42.77 2.41
558 5470 2.168458 TGGAGTTGGATCCGGATACA 57.832 50.000 26.16 26.16 42.77 2.29
559 5471 3.665190 GATTGGAGTTGGATCCGGATAC 58.335 50.000 20.68 20.68 42.77 2.24
560 5472 2.299013 CGATTGGAGTTGGATCCGGATA 59.701 50.000 19.15 0.00 42.77 2.59
561 5473 1.070758 CGATTGGAGTTGGATCCGGAT 59.929 52.381 19.21 19.21 42.77 4.18
562 5474 0.464036 CGATTGGAGTTGGATCCGGA 59.536 55.000 6.61 6.61 42.77 5.14
563 5475 0.464036 TCGATTGGAGTTGGATCCGG 59.536 55.000 7.39 0.00 42.77 5.14
564 5476 2.533266 ATCGATTGGAGTTGGATCCG 57.467 50.000 7.39 0.00 42.77 4.18
565 5477 3.313526 CACAATCGATTGGAGTTGGATCC 59.686 47.826 34.69 4.20 41.96 3.36
566 5478 3.242870 GCACAATCGATTGGAGTTGGATC 60.243 47.826 34.69 12.84 41.96 3.36
567 5479 2.684881 GCACAATCGATTGGAGTTGGAT 59.315 45.455 34.69 14.12 41.96 3.41
568 5480 2.083774 GCACAATCGATTGGAGTTGGA 58.916 47.619 34.69 0.00 41.96 3.53
569 5481 1.811965 TGCACAATCGATTGGAGTTGG 59.188 47.619 34.69 19.94 41.96 3.77
570 5482 3.770263 ATGCACAATCGATTGGAGTTG 57.230 42.857 34.69 25.79 41.96 3.16
571 5483 5.371526 AGATATGCACAATCGATTGGAGTT 58.628 37.500 34.69 21.48 41.96 3.01
572 5484 4.965814 AGATATGCACAATCGATTGGAGT 58.034 39.130 34.69 21.94 41.96 3.85
573 5485 5.936686 AAGATATGCACAATCGATTGGAG 57.063 39.130 34.69 27.71 41.96 3.86
574 5486 5.239306 GGAAAGATATGCACAATCGATTGGA 59.761 40.000 34.69 21.62 41.96 3.53
575 5487 5.455392 GGAAAGATATGCACAATCGATTGG 58.545 41.667 34.69 25.49 41.96 3.16
576 5488 5.240183 AGGGAAAGATATGCACAATCGATTG 59.760 40.000 31.51 31.51 43.26 2.67
577 5489 5.380043 AGGGAAAGATATGCACAATCGATT 58.620 37.500 4.39 4.39 0.00 3.34
578 5490 4.978099 AGGGAAAGATATGCACAATCGAT 58.022 39.130 0.00 0.00 0.00 3.59
579 5491 4.422073 AGGGAAAGATATGCACAATCGA 57.578 40.909 0.00 0.00 0.00 3.59
580 5492 6.808008 AATAGGGAAAGATATGCACAATCG 57.192 37.500 0.00 0.00 0.00 3.34
581 5493 9.899226 GTAAAATAGGGAAAGATATGCACAATC 57.101 33.333 0.00 0.00 0.00 2.67
582 5494 9.646522 AGTAAAATAGGGAAAGATATGCACAAT 57.353 29.630 0.00 0.00 0.00 2.71
593 5505 9.931210 CGTGCTTTATTAGTAAAATAGGGAAAG 57.069 33.333 0.00 0.00 29.86 2.62
594 5506 8.895737 CCGTGCTTTATTAGTAAAATAGGGAAA 58.104 33.333 6.72 0.00 30.35 3.13
595 5507 8.266473 TCCGTGCTTTATTAGTAAAATAGGGAA 58.734 33.333 10.34 0.89 32.62 3.97
596 5508 7.794041 TCCGTGCTTTATTAGTAAAATAGGGA 58.206 34.615 9.38 9.38 32.84 4.20
597 5509 7.713942 ACTCCGTGCTTTATTAGTAAAATAGGG 59.286 37.037 0.00 0.81 29.86 3.53
598 5510 8.548721 CACTCCGTGCTTTATTAGTAAAATAGG 58.451 37.037 0.00 0.00 29.86 2.57
1192 6694 0.689080 ATGGCGTCCTCCACATCTCT 60.689 55.000 0.00 0.00 39.25 3.10
2015 7952 0.984230 AAGACCAAGAAGCATCCGGA 59.016 50.000 6.61 6.61 0.00 5.14
2016 7953 1.470098 CAAAGACCAAGAAGCATCCGG 59.530 52.381 0.00 0.00 0.00 5.14
2017 7954 1.470098 CCAAAGACCAAGAAGCATCCG 59.530 52.381 0.00 0.00 0.00 4.18
2018 7955 2.795329 TCCAAAGACCAAGAAGCATCC 58.205 47.619 0.00 0.00 0.00 3.51
2019 7956 4.704057 AGATTCCAAAGACCAAGAAGCATC 59.296 41.667 0.00 0.00 0.00 3.91
2020 7957 4.670765 AGATTCCAAAGACCAAGAAGCAT 58.329 39.130 0.00 0.00 0.00 3.79
2021 7958 4.074970 GAGATTCCAAAGACCAAGAAGCA 58.925 43.478 0.00 0.00 0.00 3.91
2022 7959 3.441922 GGAGATTCCAAAGACCAAGAAGC 59.558 47.826 0.00 0.00 36.28 3.86
2023 7960 4.655963 TGGAGATTCCAAAGACCAAGAAG 58.344 43.478 0.00 0.00 45.00 2.85
2024 7961 4.722526 TGGAGATTCCAAAGACCAAGAA 57.277 40.909 0.00 0.00 45.00 2.52
2038 7975 5.360144 CCAAGAAGCAATGAATCTGGAGATT 59.640 40.000 1.36 1.36 46.54 2.40
2039 7976 4.888239 CCAAGAAGCAATGAATCTGGAGAT 59.112 41.667 0.00 0.00 36.07 2.75
2040 7977 4.263639 ACCAAGAAGCAATGAATCTGGAGA 60.264 41.667 0.00 0.00 0.00 3.71
2041 7978 4.015084 ACCAAGAAGCAATGAATCTGGAG 58.985 43.478 0.00 0.00 0.00 3.86
2042 7979 4.012374 GACCAAGAAGCAATGAATCTGGA 58.988 43.478 0.00 0.00 0.00 3.86
2043 7980 4.015084 AGACCAAGAAGCAATGAATCTGG 58.985 43.478 0.00 0.00 0.00 3.86
2044 7981 5.640189 AAGACCAAGAAGCAATGAATCTG 57.360 39.130 0.00 0.00 0.00 2.90
2045 7982 7.951347 ATAAAGACCAAGAAGCAATGAATCT 57.049 32.000 0.00 0.00 0.00 2.40
2046 7983 8.992835 AAATAAAGACCAAGAAGCAATGAATC 57.007 30.769 0.00 0.00 0.00 2.52
2047 7984 9.211485 CAAAATAAAGACCAAGAAGCAATGAAT 57.789 29.630 0.00 0.00 0.00 2.57
2048 7985 8.203485 ACAAAATAAAGACCAAGAAGCAATGAA 58.797 29.630 0.00 0.00 0.00 2.57
2049 7986 7.725251 ACAAAATAAAGACCAAGAAGCAATGA 58.275 30.769 0.00 0.00 0.00 2.57
2050 7987 7.951530 ACAAAATAAAGACCAAGAAGCAATG 57.048 32.000 0.00 0.00 0.00 2.82
2051 7988 7.442062 CCAACAAAATAAAGACCAAGAAGCAAT 59.558 33.333 0.00 0.00 0.00 3.56
2052 7989 6.760770 CCAACAAAATAAAGACCAAGAAGCAA 59.239 34.615 0.00 0.00 0.00 3.91
2053 7990 6.127196 ACCAACAAAATAAAGACCAAGAAGCA 60.127 34.615 0.00 0.00 0.00 3.91
2054 7991 6.200854 CACCAACAAAATAAAGACCAAGAAGC 59.799 38.462 0.00 0.00 0.00 3.86
2055 7992 7.488322 TCACCAACAAAATAAAGACCAAGAAG 58.512 34.615 0.00 0.00 0.00 2.85
2056 7993 7.411486 TCACCAACAAAATAAAGACCAAGAA 57.589 32.000 0.00 0.00 0.00 2.52
2057 7994 7.411486 TTCACCAACAAAATAAAGACCAAGA 57.589 32.000 0.00 0.00 0.00 3.02
2058 7995 9.757227 TTATTCACCAACAAAATAAAGACCAAG 57.243 29.630 0.00 0.00 0.00 3.61
2068 8005 8.987890 GCACTACAATTTATTCACCAACAAAAT 58.012 29.630 0.00 0.00 0.00 1.82
2069 8006 7.981789 TGCACTACAATTTATTCACCAACAAAA 59.018 29.630 0.00 0.00 0.00 2.44
2070 8007 7.492524 TGCACTACAATTTATTCACCAACAAA 58.507 30.769 0.00 0.00 0.00 2.83
2071 8008 7.043961 TGCACTACAATTTATTCACCAACAA 57.956 32.000 0.00 0.00 0.00 2.83
2072 8009 6.264292 ACTGCACTACAATTTATTCACCAACA 59.736 34.615 0.00 0.00 0.00 3.33
2073 8010 6.677913 ACTGCACTACAATTTATTCACCAAC 58.322 36.000 0.00 0.00 0.00 3.77
2074 8011 6.892658 ACTGCACTACAATTTATTCACCAA 57.107 33.333 0.00 0.00 0.00 3.67
2075 8012 7.987750 TTACTGCACTACAATTTATTCACCA 57.012 32.000 0.00 0.00 0.00 4.17
2083 8020 9.062524 TCTGTGTTATTTACTGCACTACAATTT 57.937 29.630 0.00 0.00 33.44 1.82
2084 8021 8.615878 TCTGTGTTATTTACTGCACTACAATT 57.384 30.769 0.00 0.00 33.44 2.32
2085 8022 8.615878 TTCTGTGTTATTTACTGCACTACAAT 57.384 30.769 0.00 0.00 33.44 2.71
2086 8023 8.503196 CATTCTGTGTTATTTACTGCACTACAA 58.497 33.333 0.00 0.00 33.44 2.41
2087 8024 7.119116 CCATTCTGTGTTATTTACTGCACTACA 59.881 37.037 0.00 0.00 33.44 2.74
2088 8025 7.333423 TCCATTCTGTGTTATTTACTGCACTAC 59.667 37.037 0.00 0.00 33.44 2.73
2089 8026 7.390823 TCCATTCTGTGTTATTTACTGCACTA 58.609 34.615 0.00 0.00 33.44 2.74
2090 8027 6.237901 TCCATTCTGTGTTATTTACTGCACT 58.762 36.000 0.00 0.00 33.44 4.40
2091 8028 6.494893 TCCATTCTGTGTTATTTACTGCAC 57.505 37.500 0.00 0.00 0.00 4.57
2092 8029 6.883756 TGATCCATTCTGTGTTATTTACTGCA 59.116 34.615 0.00 0.00 0.00 4.41
2093 8030 7.280876 TCTGATCCATTCTGTGTTATTTACTGC 59.719 37.037 0.00 0.00 0.00 4.40
2094 8031 8.722480 TCTGATCCATTCTGTGTTATTTACTG 57.278 34.615 0.00 0.00 0.00 2.74
2095 8032 8.543774 ACTCTGATCCATTCTGTGTTATTTACT 58.456 33.333 0.00 0.00 29.08 2.24
2096 8033 8.607459 CACTCTGATCCATTCTGTGTTATTTAC 58.393 37.037 0.00 0.00 30.48 2.01
2097 8034 8.539544 TCACTCTGATCCATTCTGTGTTATTTA 58.460 33.333 0.00 0.00 30.48 1.40
2098 8035 7.335422 GTCACTCTGATCCATTCTGTGTTATTT 59.665 37.037 0.00 0.00 30.48 1.40
2099 8036 6.820656 GTCACTCTGATCCATTCTGTGTTATT 59.179 38.462 0.00 0.00 30.48 1.40
2100 8037 6.155910 AGTCACTCTGATCCATTCTGTGTTAT 59.844 38.462 0.00 0.00 30.48 1.89
2101 8038 5.481824 AGTCACTCTGATCCATTCTGTGTTA 59.518 40.000 0.00 0.00 30.48 2.41
2102 8039 4.285517 AGTCACTCTGATCCATTCTGTGTT 59.714 41.667 0.00 0.00 30.48 3.32
2103 8040 3.837146 AGTCACTCTGATCCATTCTGTGT 59.163 43.478 0.00 0.00 32.33 3.72
2104 8041 4.468765 AGTCACTCTGATCCATTCTGTG 57.531 45.455 0.00 0.00 0.00 3.66
2105 8042 4.829968 CAAGTCACTCTGATCCATTCTGT 58.170 43.478 0.00 0.00 0.00 3.41
2106 8043 3.622163 GCAAGTCACTCTGATCCATTCTG 59.378 47.826 0.00 0.00 0.00 3.02
2107 8044 3.678252 CGCAAGTCACTCTGATCCATTCT 60.678 47.826 0.00 0.00 0.00 2.40
2108 8045 2.606725 CGCAAGTCACTCTGATCCATTC 59.393 50.000 0.00 0.00 0.00 2.67
2109 8046 2.234661 TCGCAAGTCACTCTGATCCATT 59.765 45.455 0.00 0.00 39.48 3.16
2110 8047 1.827344 TCGCAAGTCACTCTGATCCAT 59.173 47.619 0.00 0.00 39.48 3.41
2111 8048 1.256812 TCGCAAGTCACTCTGATCCA 58.743 50.000 0.00 0.00 39.48 3.41
2112 8049 2.593346 ATCGCAAGTCACTCTGATCC 57.407 50.000 0.00 0.00 39.48 3.36
2113 8050 4.935885 AAAATCGCAAGTCACTCTGATC 57.064 40.909 0.00 0.00 39.48 2.92
2163 8100 9.226606 ACTAAACATCCGATGTCTAATTGAAAA 57.773 29.630 14.42 0.00 44.07 2.29
2164 8101 8.664798 CACTAAACATCCGATGTCTAATTGAAA 58.335 33.333 14.42 0.00 44.07 2.69
2165 8102 7.822334 ACACTAAACATCCGATGTCTAATTGAA 59.178 33.333 14.42 0.00 44.07 2.69
2166 8103 7.327975 ACACTAAACATCCGATGTCTAATTGA 58.672 34.615 14.42 0.00 44.07 2.57
2167 8104 7.539712 ACACTAAACATCCGATGTCTAATTG 57.460 36.000 14.42 10.41 44.07 2.32
2168 8105 9.832445 AATACACTAAACATCCGATGTCTAATT 57.168 29.630 14.42 7.77 44.07 1.40
2169 8106 9.477484 GAATACACTAAACATCCGATGTCTAAT 57.523 33.333 14.42 4.76 44.07 1.73
2170 8107 8.692710 AGAATACACTAAACATCCGATGTCTAA 58.307 33.333 14.42 2.91 44.07 2.10
2171 8108 8.234136 AGAATACACTAAACATCCGATGTCTA 57.766 34.615 14.42 4.48 44.07 2.59
2172 8109 7.113658 AGAATACACTAAACATCCGATGTCT 57.886 36.000 14.42 3.40 44.07 3.41
2173 8110 7.919091 TGTAGAATACACTAAACATCCGATGTC 59.081 37.037 14.42 0.00 46.14 3.06
2174 8111 7.778083 TGTAGAATACACTAAACATCCGATGT 58.222 34.615 8.28 8.28 46.14 3.06
2185 8122 7.598869 CTGCAGTCAGTTTGTAGAATACACTAA 59.401 37.037 5.25 0.00 42.42 2.24
2186 8123 7.090808 CTGCAGTCAGTTTGTAGAATACACTA 58.909 38.462 5.25 0.00 42.42 2.74
2187 8124 5.928839 CTGCAGTCAGTTTGTAGAATACACT 59.071 40.000 5.25 0.00 42.42 3.55
2188 8125 5.120830 CCTGCAGTCAGTTTGTAGAATACAC 59.879 44.000 13.81 0.00 44.29 2.90
2189 8126 5.237815 CCTGCAGTCAGTTTGTAGAATACA 58.762 41.667 13.81 0.00 43.54 2.29
2190 8127 4.093556 GCCTGCAGTCAGTTTGTAGAATAC 59.906 45.833 13.81 0.00 39.30 1.89
2191 8128 4.253685 GCCTGCAGTCAGTTTGTAGAATA 58.746 43.478 13.81 0.00 38.66 1.75
2192 8129 3.077359 GCCTGCAGTCAGTTTGTAGAAT 58.923 45.455 13.81 0.00 38.66 2.40
2193 8130 2.158827 TGCCTGCAGTCAGTTTGTAGAA 60.159 45.455 13.81 0.00 38.66 2.10
2195 8132 1.882912 TGCCTGCAGTCAGTTTGTAG 58.117 50.000 13.81 0.00 38.66 2.74
2197 8134 0.956633 CATGCCTGCAGTCAGTTTGT 59.043 50.000 13.81 0.00 38.66 2.83
2210 8147 2.289195 CCTTCAACAATGTTGCATGCCT 60.289 45.455 20.34 0.00 0.00 4.75
2212 8149 2.070783 CCCTTCAACAATGTTGCATGC 58.929 47.619 20.34 11.82 0.00 4.06
2217 8154 3.132925 CCTTTGCCCTTCAACAATGTTG 58.867 45.455 19.23 19.23 33.73 3.33
2218 8155 2.771372 ACCTTTGCCCTTCAACAATGTT 59.229 40.909 0.00 0.00 33.73 2.71
2219 8156 2.397597 ACCTTTGCCCTTCAACAATGT 58.602 42.857 0.00 0.00 33.73 2.71
2221 8158 3.826729 GAGTACCTTTGCCCTTCAACAAT 59.173 43.478 0.00 0.00 33.73 2.71
2222 8159 3.117663 AGAGTACCTTTGCCCTTCAACAA 60.118 43.478 0.00 0.00 33.73 2.83
2223 8160 2.441750 AGAGTACCTTTGCCCTTCAACA 59.558 45.455 0.00 0.00 33.73 3.33
2225 8162 4.595781 TCTTAGAGTACCTTTGCCCTTCAA 59.404 41.667 0.00 0.00 0.00 2.69
2228 8165 4.565861 GCTTCTTAGAGTACCTTTGCCCTT 60.566 45.833 0.00 0.00 0.00 3.95
2229 8166 3.055021 GCTTCTTAGAGTACCTTTGCCCT 60.055 47.826 0.00 0.00 0.00 5.19
2230 8167 3.055021 AGCTTCTTAGAGTACCTTTGCCC 60.055 47.826 0.00 0.00 0.00 5.36
2231 8168 3.935828 CAGCTTCTTAGAGTACCTTTGCC 59.064 47.826 0.00 0.00 0.00 4.52
2232 8169 4.822026 TCAGCTTCTTAGAGTACCTTTGC 58.178 43.478 0.00 0.00 0.00 3.68
2234 8171 7.246171 TCATTCAGCTTCTTAGAGTACCTTT 57.754 36.000 0.00 0.00 0.00 3.11
2235 8172 6.859112 TCATTCAGCTTCTTAGAGTACCTT 57.141 37.500 0.00 0.00 0.00 3.50
2236 8173 8.540507 TTATCATTCAGCTTCTTAGAGTACCT 57.459 34.615 0.00 0.00 0.00 3.08
2237 8174 9.036671 GTTTATCATTCAGCTTCTTAGAGTACC 57.963 37.037 0.00 0.00 0.00 3.34
2238 8175 9.587772 TGTTTATCATTCAGCTTCTTAGAGTAC 57.412 33.333 0.00 0.00 0.00 2.73
2239 8176 9.809096 CTGTTTATCATTCAGCTTCTTAGAGTA 57.191 33.333 0.00 0.00 0.00 2.59
2240 8177 7.768120 CCTGTTTATCATTCAGCTTCTTAGAGT 59.232 37.037 0.00 0.00 0.00 3.24
2241 8178 7.768120 ACCTGTTTATCATTCAGCTTCTTAGAG 59.232 37.037 0.00 0.00 0.00 2.43
2242 8179 7.624549 ACCTGTTTATCATTCAGCTTCTTAGA 58.375 34.615 0.00 0.00 0.00 2.10
2243 8180 7.550551 TGACCTGTTTATCATTCAGCTTCTTAG 59.449 37.037 0.00 0.00 0.00 2.18
2244 8181 7.334421 GTGACCTGTTTATCATTCAGCTTCTTA 59.666 37.037 0.00 0.00 0.00 2.10
2246 8183 5.645497 GTGACCTGTTTATCATTCAGCTTCT 59.355 40.000 0.00 0.00 0.00 2.85
2247 8184 5.163713 GGTGACCTGTTTATCATTCAGCTTC 60.164 44.000 0.00 0.00 35.45 3.86
2248 8185 4.702131 GGTGACCTGTTTATCATTCAGCTT 59.298 41.667 0.00 0.00 35.45 3.74
2249 8186 4.263462 TGGTGACCTGTTTATCATTCAGCT 60.263 41.667 2.11 0.00 37.36 4.24
2250 8187 4.009675 TGGTGACCTGTTTATCATTCAGC 58.990 43.478 2.11 0.00 37.17 4.26
2251 8188 5.473162 TGTTGGTGACCTGTTTATCATTCAG 59.527 40.000 2.11 0.00 0.00 3.02
2252 8189 5.380900 TGTTGGTGACCTGTTTATCATTCA 58.619 37.500 2.11 0.00 0.00 2.57
2255 8192 6.721318 AGTATGTTGGTGACCTGTTTATCAT 58.279 36.000 2.11 0.00 0.00 2.45
2256 8193 6.121776 AGTATGTTGGTGACCTGTTTATCA 57.878 37.500 2.11 0.00 0.00 2.15
2257 8194 8.038944 TCTAAGTATGTTGGTGACCTGTTTATC 58.961 37.037 2.11 0.00 0.00 1.75
2259 8196 7.305813 TCTAAGTATGTTGGTGACCTGTTTA 57.694 36.000 2.11 0.00 0.00 2.01
2260 8197 6.182507 TCTAAGTATGTTGGTGACCTGTTT 57.817 37.500 2.11 0.00 0.00 2.83
2261 8198 5.794894 CTCTAAGTATGTTGGTGACCTGTT 58.205 41.667 2.11 0.00 0.00 3.16
2262 8199 4.322801 GCTCTAAGTATGTTGGTGACCTGT 60.323 45.833 2.11 0.00 0.00 4.00
2264 8201 4.097418 AGCTCTAAGTATGTTGGTGACCT 58.903 43.478 2.11 0.00 0.00 3.85
2266 8203 4.870991 GGAAGCTCTAAGTATGTTGGTGAC 59.129 45.833 0.00 0.00 0.00 3.67
2267 8204 4.777896 AGGAAGCTCTAAGTATGTTGGTGA 59.222 41.667 0.00 0.00 0.00 4.02
2268 8205 5.091261 AGGAAGCTCTAAGTATGTTGGTG 57.909 43.478 0.00 0.00 0.00 4.17
2270 8207 4.878397 CCAAGGAAGCTCTAAGTATGTTGG 59.122 45.833 0.00 0.00 0.00 3.77
2271 8208 4.878397 CCCAAGGAAGCTCTAAGTATGTTG 59.122 45.833 0.00 0.00 0.00 3.33
2272 8209 4.536489 ACCCAAGGAAGCTCTAAGTATGTT 59.464 41.667 0.00 0.00 0.00 2.71
2274 8211 4.762289 ACCCAAGGAAGCTCTAAGTATG 57.238 45.455 0.00 0.00 0.00 2.39
2275 8212 5.014228 ACAAACCCAAGGAAGCTCTAAGTAT 59.986 40.000 0.00 0.00 0.00 2.12
2276 8213 4.349930 ACAAACCCAAGGAAGCTCTAAGTA 59.650 41.667 0.00 0.00 0.00 2.24
2277 8214 3.138468 ACAAACCCAAGGAAGCTCTAAGT 59.862 43.478 0.00 0.00 0.00 2.24
2278 8215 3.503748 CACAAACCCAAGGAAGCTCTAAG 59.496 47.826 0.00 0.00 0.00 2.18
2279 8216 3.486383 CACAAACCCAAGGAAGCTCTAA 58.514 45.455 0.00 0.00 0.00 2.10
2281 8218 1.479389 CCACAAACCCAAGGAAGCTCT 60.479 52.381 0.00 0.00 0.00 4.09
2282 8219 0.961753 CCACAAACCCAAGGAAGCTC 59.038 55.000 0.00 0.00 0.00 4.09
2283 8220 0.555769 TCCACAAACCCAAGGAAGCT 59.444 50.000 0.00 0.00 0.00 3.74
2284 8221 0.961753 CTCCACAAACCCAAGGAAGC 59.038 55.000 0.00 0.00 0.00 3.86
2285 8222 1.144913 TCCTCCACAAACCCAAGGAAG 59.855 52.381 0.00 0.00 33.27 3.46
2287 8224 0.476771 GTCCTCCACAAACCCAAGGA 59.523 55.000 0.00 0.00 33.79 3.36
2288 8225 0.184933 TGTCCTCCACAAACCCAAGG 59.815 55.000 0.00 0.00 29.30 3.61
2289 8226 1.888512 CATGTCCTCCACAAACCCAAG 59.111 52.381 0.00 0.00 38.97 3.61
2290 8227 1.216678 ACATGTCCTCCACAAACCCAA 59.783 47.619 0.00 0.00 38.97 4.12
2291 8228 0.850100 ACATGTCCTCCACAAACCCA 59.150 50.000 0.00 0.00 38.97 4.51
2292 8229 1.073923 AGACATGTCCTCCACAAACCC 59.926 52.381 22.21 0.00 38.97 4.11
2293 8230 2.154462 CAGACATGTCCTCCACAAACC 58.846 52.381 22.21 0.00 38.97 3.27
2294 8231 2.154462 CCAGACATGTCCTCCACAAAC 58.846 52.381 22.21 0.00 38.97 2.93
2298 8235 2.224523 TGAAACCAGACATGTCCTCCAC 60.225 50.000 22.21 10.25 0.00 4.02
2299 8236 2.054021 TGAAACCAGACATGTCCTCCA 58.946 47.619 22.21 9.14 0.00 3.86
2300 8237 2.224523 TGTGAAACCAGACATGTCCTCC 60.225 50.000 22.21 6.75 34.36 4.30
2301 8238 3.126001 TGTGAAACCAGACATGTCCTC 57.874 47.619 22.21 11.41 34.36 3.71
2303 8240 3.632145 ACTTTGTGAAACCAGACATGTCC 59.368 43.478 22.21 6.41 34.36 4.02
2304 8241 4.335315 TGACTTTGTGAAACCAGACATGTC 59.665 41.667 18.47 18.47 34.36 3.06
2305 8242 4.269183 TGACTTTGTGAAACCAGACATGT 58.731 39.130 0.00 0.00 34.36 3.21
2306 8243 4.336433 ACTGACTTTGTGAAACCAGACATG 59.664 41.667 0.00 0.00 34.36 3.21
2307 8244 4.526970 ACTGACTTTGTGAAACCAGACAT 58.473 39.130 0.00 0.00 34.36 3.06
2309 8246 4.965119 AACTGACTTTGTGAAACCAGAC 57.035 40.909 0.00 0.00 34.36 3.51
2310 8247 5.007034 TGAAACTGACTTTGTGAAACCAGA 58.993 37.500 0.00 0.00 34.36 3.86
2311 8248 5.095490 GTGAAACTGACTTTGTGAAACCAG 58.905 41.667 0.00 0.00 34.36 4.00
2312 8249 5.054390 GTGAAACTGACTTTGTGAAACCA 57.946 39.130 0.00 0.00 34.36 3.67
2328 8265 4.859629 ACTGTCTTCGTGAAAGTGAAAC 57.140 40.909 3.84 0.00 41.49 2.78
2333 8270 3.536956 TTCCACTGTCTTCGTGAAAGT 57.463 42.857 0.00 0.00 43.75 2.66
2335 8272 3.003275 GCATTTCCACTGTCTTCGTGAAA 59.997 43.478 0.00 0.00 34.35 2.69
2336 8273 2.548057 GCATTTCCACTGTCTTCGTGAA 59.452 45.455 0.00 0.00 34.35 3.18
2338 8275 1.872952 TGCATTTCCACTGTCTTCGTG 59.127 47.619 0.00 0.00 0.00 4.35
2339 8276 2.146342 CTGCATTTCCACTGTCTTCGT 58.854 47.619 0.00 0.00 0.00 3.85
2340 8277 2.416747 TCTGCATTTCCACTGTCTTCG 58.583 47.619 0.00 0.00 0.00 3.79
2341 8278 4.836125 TTTCTGCATTTCCACTGTCTTC 57.164 40.909 0.00 0.00 0.00 2.87
2342 8279 5.452356 CCTTTTTCTGCATTTCCACTGTCTT 60.452 40.000 0.00 0.00 0.00 3.01
2343 8280 4.038402 CCTTTTTCTGCATTTCCACTGTCT 59.962 41.667 0.00 0.00 0.00 3.41
2344 8281 4.037923 TCCTTTTTCTGCATTTCCACTGTC 59.962 41.667 0.00 0.00 0.00 3.51
2345 8282 3.960102 TCCTTTTTCTGCATTTCCACTGT 59.040 39.130 0.00 0.00 0.00 3.55
2346 8283 4.589216 TCCTTTTTCTGCATTTCCACTG 57.411 40.909 0.00 0.00 0.00 3.66


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.