Multiple sequence alignment - TraesCS3B01G558400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G558400 chr3B 100.000 7226 0 0 1 7226 792857122 792864347 0.000000e+00 13345.0
1 TraesCS3B01G558400 chr3B 83.184 2004 229 54 4856 6838 28316479 28314563 0.000000e+00 1735.0
2 TraesCS3B01G558400 chr3B 81.490 1275 157 46 5577 6830 13506747 13505531 0.000000e+00 974.0
3 TraesCS3B01G558400 chr3B 85.956 591 57 10 4994 5584 13508687 13508123 6.200000e-170 608.0
4 TraesCS3B01G558400 chr3B 79.457 589 91 22 4273 4854 28317111 28316546 2.440000e-104 390.0
5 TraesCS3B01G558400 chr3B 83.247 388 54 9 1047 1427 13509640 13509257 5.370000e-91 346.0
6 TraesCS3B01G558400 chr3D 90.160 2998 185 45 4233 7205 591823014 591820102 0.000000e+00 3801.0
7 TraesCS3B01G558400 chr3D 82.898 2678 233 112 3 2528 591828247 591825643 0.000000e+00 2200.0
8 TraesCS3B01G558400 chr3D 84.596 1954 208 52 4874 6818 9417995 9416126 0.000000e+00 1855.0
9 TraesCS3B01G558400 chr3D 83.602 1988 233 55 4864 6838 5232924 5234831 0.000000e+00 1779.0
10 TraesCS3B01G558400 chr3D 81.614 669 66 38 1004 1627 9420184 9419528 1.080000e-137 501.0
11 TraesCS3B01G558400 chr3D 80.220 637 78 32 1007 1610 5230797 5231418 1.110000e-117 435.0
12 TraesCS3B01G558400 chr3D 87.709 358 41 3 4266 4621 9418730 9418374 1.450000e-111 414.0
13 TraesCS3B01G558400 chr3D 87.925 265 20 6 2630 2886 591825646 591825386 1.180000e-77 302.0
14 TraesCS3B01G558400 chr3D 81.694 366 51 14 1035 1386 5222014 5222377 2.550000e-74 291.0
15 TraesCS3B01G558400 chr3D 79.457 258 35 9 3454 3711 591824853 591824614 4.480000e-37 167.0
16 TraesCS3B01G558400 chr3D 84.906 159 15 7 3016 3171 591825193 591825041 1.260000e-32 152.0
17 TraesCS3B01G558400 chr3D 83.333 180 11 4 3833 3993 591824502 591824323 1.620000e-31 148.0
18 TraesCS3B01G558400 chr3D 82.514 183 16 7 3193 3359 591825051 591824869 5.840000e-31 147.0
19 TraesCS3B01G558400 chr3A 89.301 2645 190 51 4276 6887 722279038 722281622 0.000000e+00 3230.0
20 TraesCS3B01G558400 chr3A 84.597 1714 186 43 4856 6561 11760917 11762560 0.000000e+00 1631.0
21 TraesCS3B01G558400 chr3A 81.545 1761 145 77 41 1715 722274296 722275962 0.000000e+00 1286.0
22 TraesCS3B01G558400 chr3A 82.447 809 84 25 1763 2525 722276048 722276844 0.000000e+00 654.0
23 TraesCS3B01G558400 chr3A 91.275 447 30 3 6446 6887 325905143 325904701 1.040000e-167 601.0
24 TraesCS3B01G558400 chr3A 82.580 597 75 18 1035 1612 11758266 11758852 3.890000e-137 499.0
25 TraesCS3B01G558400 chr3A 81.345 595 80 20 4267 4854 11760281 11760851 8.550000e-124 455.0
26 TraesCS3B01G558400 chr3A 91.909 309 22 1 6582 6887 129544573 129544265 5.180000e-116 429.0
27 TraesCS3B01G558400 chr3A 87.745 204 17 5 4032 4233 722278840 722279037 1.570000e-56 231.0
28 TraesCS3B01G558400 chr3A 79.427 384 31 25 3018 3363 722277599 722277972 2.030000e-55 228.0
29 TraesCS3B01G558400 chr3A 78.777 278 18 21 2632 2883 722276847 722277109 1.620000e-31 148.0
30 TraesCS3B01G558400 chr3A 80.142 141 26 2 3511 3650 12112025 12112164 3.570000e-18 104.0
31 TraesCS3B01G558400 chr3A 100.000 35 0 0 6446 6480 325905179 325905145 1.680000e-06 65.8
32 TraesCS3B01G558400 chr3A 84.375 64 8 2 3511 3573 16634720 16634782 2.180000e-05 62.1
33 TraesCS3B01G558400 chrUn 81.877 2610 329 76 4267 6838 36511573 36514076 0.000000e+00 2067.0
34 TraesCS3B01G558400 chrUn 79.871 621 77 25 1028 1627 36508235 36508828 1.880000e-110 411.0
35 TraesCS3B01G558400 chr4A 91.009 456 32 4 6437 6887 686150639 686151090 2.230000e-169 606.0
36 TraesCS3B01G558400 chr5A 90.868 438 31 4 6455 6887 568455442 568455009 4.860000e-161 579.0
37 TraesCS3B01G558400 chr5A 89.785 372 29 4 6521 6887 499134028 499134395 1.100000e-127 468.0
38 TraesCS3B01G558400 chr5A 90.991 111 10 0 2523 2633 39554336 39554226 4.520000e-32 150.0
39 TraesCS3B01G558400 chr2A 92.000 325 23 1 6566 6887 382402975 382403299 3.070000e-123 453.0
40 TraesCS3B01G558400 chr1A 92.233 309 21 1 6582 6887 318037971 318038279 1.110000e-117 435.0
41 TraesCS3B01G558400 chr7B 83.398 259 41 2 4354 4611 532483874 532483617 9.370000e-59 239.0
42 TraesCS3B01G558400 chr7B 92.562 121 7 2 2526 2644 645543581 645543701 9.640000e-39 172.0
43 TraesCS3B01G558400 chr7B 100.000 58 0 0 3398 3455 532116797 532116854 2.760000e-19 108.0
44 TraesCS3B01G558400 chr7B 80.000 105 15 6 1498 1599 745143447 745143548 1.010000e-08 73.1
45 TraesCS3B01G558400 chr7A 81.783 258 47 0 4354 4611 572184710 572184453 4.390000e-52 217.0
46 TraesCS3B01G558400 chr7A 84.946 93 14 0 1507 1599 571940122 571940030 2.150000e-15 95.3
47 TraesCS3B01G558400 chr7A 100.000 28 0 0 1691 1718 561148223 561148196 1.300000e-02 52.8
48 TraesCS3B01G558400 chr6B 81.048 248 47 0 4368 4615 234151738 234151985 1.590000e-46 198.0
49 TraesCS3B01G558400 chr6A 80.645 248 48 0 4368 4615 176982805 176983052 7.400000e-45 193.0
50 TraesCS3B01G558400 chr1B 90.984 122 11 0 2523 2644 599630417 599630538 1.610000e-36 165.0
51 TraesCS3B01G558400 chr1B 90.984 122 11 0 2523 2644 599831388 599831509 1.610000e-36 165.0
52 TraesCS3B01G558400 chr1B 93.458 107 7 0 2527 2633 657182871 657182977 7.500000e-35 159.0
53 TraesCS3B01G558400 chr1B 91.935 62 3 2 3398 3458 306251107 306251167 1.290000e-12 86.1
54 TraesCS3B01G558400 chr5D 92.793 111 8 0 2523 2633 350480924 350481034 2.090000e-35 161.0
55 TraesCS3B01G558400 chr5D 96.774 31 1 0 1691 1721 397344436 397344406 1.300000e-02 52.8
56 TraesCS3B01G558400 chr4D 90.164 122 11 1 2513 2633 467632475 467632354 2.700000e-34 158.0
57 TraesCS3B01G558400 chr7D 91.228 114 10 0 2527 2640 568184255 568184368 9.710000e-34 156.0
58 TraesCS3B01G558400 chr7D 83.871 93 15 0 1507 1599 504254445 504254353 9.980000e-14 89.8
59 TraesCS3B01G558400 chr7D 80.000 105 15 6 1498 1599 632162708 632162809 1.010000e-08 73.1
60 TraesCS3B01G558400 chr7D 100.000 28 0 0 1692 1719 602172374 602172347 1.300000e-02 52.8
61 TraesCS3B01G558400 chr2D 91.304 115 9 1 2523 2636 535113504 535113618 9.710000e-34 156.0
62 TraesCS3B01G558400 chr5B 96.364 55 2 0 3398 3452 6647799 6647745 2.780000e-14 91.6
63 TraesCS3B01G558400 chr5B 92.857 56 4 0 3397 3452 472892800 472892855 1.670000e-11 82.4
64 TraesCS3B01G558400 chr4B 96.296 54 2 0 3398 3451 89407629 89407576 9.980000e-14 89.8
65 TraesCS3B01G558400 chr4B 92.157 51 4 0 3398 3448 65717979 65718029 1.010000e-08 73.1
66 TraesCS3B01G558400 chr2B 93.220 59 2 2 3398 3455 548162217 548162274 1.290000e-12 86.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G558400 chr3B 792857122 792864347 7225 False 13345.000000 13345 100.000000 1 7226 1 chr3B.!!$F1 7225
1 TraesCS3B01G558400 chr3B 28314563 28317111 2548 True 1062.500000 1735 81.320500 4273 6838 2 chr3B.!!$R2 2565
2 TraesCS3B01G558400 chr3B 13505531 13509640 4109 True 642.666667 974 83.564333 1047 6830 3 chr3B.!!$R1 5783
3 TraesCS3B01G558400 chr3D 5230797 5234831 4034 False 1107.000000 1779 81.911000 1007 6838 2 chr3D.!!$F2 5831
4 TraesCS3B01G558400 chr3D 591820102 591828247 8145 True 988.142857 3801 84.456143 3 7205 7 chr3D.!!$R2 7202
5 TraesCS3B01G558400 chr3D 9416126 9420184 4058 True 923.333333 1855 84.639667 1004 6818 3 chr3D.!!$R1 5814
6 TraesCS3B01G558400 chr3A 722274296 722281622 7326 False 962.833333 3230 83.207000 41 6887 6 chr3A.!!$F4 6846
7 TraesCS3B01G558400 chr3A 11758266 11762560 4294 False 861.666667 1631 82.840667 1035 6561 3 chr3A.!!$F3 5526
8 TraesCS3B01G558400 chrUn 36508235 36514076 5841 False 1239.000000 2067 80.874000 1028 6838 2 chrUn.!!$F1 5810

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
896 977 0.105142 TCCATCCACCTACCTAGCCC 60.105 60.0 0.00 0.00 0.00 5.19 F
1995 2551 0.026803 GATCGGCTTGTTTGCTAGCG 59.973 55.0 10.77 0.00 42.87 4.26 F
2034 2597 0.030235 CCGTGACTGACAACTGACGA 59.970 55.0 0.00 0.00 0.00 4.20 F
3400 5871 0.034186 TGCCTTTGGTGCCATCTAGG 60.034 55.0 9.05 9.05 41.84 3.02 F
3409 5880 0.179009 TGCCATCTAGGGATGCAAGC 60.179 55.0 0.00 0.97 45.73 4.01 F
4679 8560 0.029834 GGCACAAGCACACTGTTCTG 59.970 55.0 0.00 0.00 44.61 3.02 F
5339 9435 1.002069 AAGGGAGGATGCATCACCAA 58.998 50.0 29.80 0.00 0.00 3.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2615 3461 0.038744 AGTACTCCCTCCGTTCGGAA 59.961 55.0 14.79 0.04 33.41 4.30 R
3638 6109 0.097674 CTTACTTGGCTCGTGCATGC 59.902 55.0 11.82 11.82 41.91 4.06 R
4027 6895 0.181114 ATGCACACGGCCATATGTCT 59.819 50.0 2.24 0.00 43.89 3.41 R
4658 8539 0.029834 GAACAGTGTGCTTGTGCCTG 59.970 55.0 0.00 0.00 38.71 4.85 R
5027 9114 0.535102 ACACGAACTTCCAGCCCTTG 60.535 55.0 0.00 0.00 0.00 3.61 R
5770 11260 0.798776 CAACCCACTCATTGACTCGC 59.201 55.0 0.00 0.00 0.00 5.03 R
6904 12434 0.521867 CATGTTGCGTCAATCGGCAG 60.522 55.0 0.00 0.00 40.26 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
59 61 1.202394 TGAAAGTGCACATGCCAACAC 60.202 47.619 21.04 0.00 41.18 3.32
60 62 0.248990 AAAGTGCACATGCCAACACG 60.249 50.000 21.04 0.00 41.18 4.49
63 65 1.825622 TGCACATGCCAACACGGAA 60.826 52.632 0.49 0.00 41.18 4.30
64 66 1.361993 GCACATGCCAACACGGAAA 59.638 52.632 0.00 0.00 36.56 3.13
65 67 0.249238 GCACATGCCAACACGGAAAA 60.249 50.000 0.00 0.00 36.56 2.29
80 82 4.275936 CACGGAAAACTCATCTCCTGTTTT 59.724 41.667 0.00 0.00 43.68 2.43
81 83 4.275936 ACGGAAAACTCATCTCCTGTTTTG 59.724 41.667 7.63 0.00 41.89 2.44
166 181 2.031012 GATCGGATCGGCCATGCA 59.969 61.111 2.24 0.00 35.94 3.96
167 182 2.031516 GATCGGATCGGCCATGCAG 61.032 63.158 2.24 0.00 35.94 4.41
168 183 2.721971 GATCGGATCGGCCATGCAGT 62.722 60.000 2.24 0.00 35.94 4.40
187 202 0.107643 TTTGTCACTGGTCGATGCCA 59.892 50.000 0.00 0.00 36.97 4.92
189 204 0.107643 TGTCACTGGTCGATGCCAAA 59.892 50.000 0.00 0.00 38.18 3.28
225 241 3.202706 GCGATCCACTTTCCGGGC 61.203 66.667 0.00 0.00 0.00 6.13
244 260 3.557686 GGGCACCGAAACTAAAACTAGGA 60.558 47.826 0.00 0.00 40.86 2.94
245 261 3.434641 GGCACCGAAACTAAAACTAGGAC 59.565 47.826 0.00 0.00 0.00 3.85
246 262 3.122445 GCACCGAAACTAAAACTAGGACG 59.878 47.826 0.00 0.00 0.00 4.79
247 263 3.676646 CACCGAAACTAAAACTAGGACGG 59.323 47.826 0.00 0.00 42.78 4.79
248 264 2.669924 CCGAAACTAAAACTAGGACGGC 59.330 50.000 0.00 0.00 0.00 5.68
249 265 2.343544 CGAAACTAAAACTAGGACGGCG 59.656 50.000 4.80 4.80 0.00 6.46
250 266 1.718396 AACTAAAACTAGGACGGCGC 58.282 50.000 6.90 0.00 0.00 6.53
251 267 0.108472 ACTAAAACTAGGACGGCGCC 60.108 55.000 19.07 19.07 0.00 6.53
338 354 1.202394 TGTGAACAAACATGCACAGCC 60.202 47.619 0.00 0.00 36.44 4.85
384 407 1.376424 CGACCACATGGCTCTGCTT 60.376 57.895 0.00 0.00 39.32 3.91
417 440 3.402681 GCCTGGGGCTGCTACTGA 61.403 66.667 0.00 0.00 46.69 3.41
419 442 1.992277 CCTGGGGCTGCTACTGAGT 60.992 63.158 0.00 0.00 0.00 3.41
421 444 1.229177 TGGGGCTGCTACTGAGTCA 60.229 57.895 0.00 0.00 0.00 3.41
422 445 0.618680 TGGGGCTGCTACTGAGTCAT 60.619 55.000 0.00 0.00 0.00 3.06
424 447 1.069358 GGGGCTGCTACTGAGTCATAC 59.931 57.143 0.00 0.00 0.00 2.39
425 448 1.269309 GGGCTGCTACTGAGTCATACG 60.269 57.143 0.00 0.00 0.00 3.06
481 508 6.533012 GTCACCGTAGTACCTTTTCCTTTATC 59.467 42.308 0.00 0.00 0.00 1.75
515 542 6.662414 ATCTTCACCAATAATACACACACG 57.338 37.500 0.00 0.00 0.00 4.49
555 582 5.130350 CCAACGGAATGGACCAATAATAGT 58.870 41.667 0.00 0.00 43.54 2.12
557 584 6.426937 CCAACGGAATGGACCAATAATAGTAG 59.573 42.308 0.00 0.00 43.54 2.57
561 588 6.812160 CGGAATGGACCAATAATAGTAGTAGC 59.188 42.308 0.00 0.00 0.00 3.58
578 605 0.886563 AGCACGTAGTACCACCACTC 59.113 55.000 0.00 0.00 41.61 3.51
598 639 0.601311 GGACACTCCACACAGCTCAC 60.601 60.000 0.00 0.00 36.28 3.51
611 652 2.350895 CTCACGGCCACATTCCCA 59.649 61.111 2.24 0.00 0.00 4.37
612 653 1.077501 CTCACGGCCACATTCCCAT 60.078 57.895 2.24 0.00 0.00 4.00
613 654 1.378382 TCACGGCCACATTCCCATG 60.378 57.895 2.24 0.00 36.34 3.66
614 655 2.755469 ACGGCCACATTCCCATGC 60.755 61.111 2.24 0.00 33.05 4.06
696 745 8.637099 CATACTACTATATGGCATGCATCTACT 58.363 37.037 21.36 0.96 0.00 2.57
703 752 2.157738 GGCATGCATCTACTTCCCATC 58.842 52.381 21.36 0.00 0.00 3.51
732 781 3.119495 TGAGAAGCTGTCGATCGATTTCA 60.119 43.478 22.50 13.62 0.00 2.69
769 822 1.255667 GGCCAGACCAAGACCGTCTA 61.256 60.000 0.26 0.00 38.54 2.59
770 823 0.108756 GCCAGACCAAGACCGTCTAC 60.109 60.000 0.26 0.00 38.54 2.59
794 847 1.937899 GTAACCACATCCCATACGCAC 59.062 52.381 0.00 0.00 0.00 5.34
809 862 2.421314 CACGCGGCCATATGGAGA 59.579 61.111 26.47 0.00 37.39 3.71
810 863 1.004560 CACGCGGCCATATGGAGAT 60.005 57.895 26.47 7.38 37.39 2.75
811 864 1.004560 ACGCGGCCATATGGAGATG 60.005 57.895 26.47 13.58 37.39 2.90
881 962 0.250901 GCCCGCACTATTCCATCCAT 60.251 55.000 0.00 0.00 0.00 3.41
883 964 1.611673 CCCGCACTATTCCATCCATCC 60.612 57.143 0.00 0.00 0.00 3.51
889 970 4.804261 GCACTATTCCATCCATCCACCTAC 60.804 50.000 0.00 0.00 0.00 3.18
891 972 2.587060 TTCCATCCATCCACCTACCT 57.413 50.000 0.00 0.00 0.00 3.08
892 973 3.717507 TTCCATCCATCCACCTACCTA 57.282 47.619 0.00 0.00 0.00 3.08
895 976 1.625818 CATCCATCCACCTACCTAGCC 59.374 57.143 0.00 0.00 0.00 3.93
896 977 0.105142 TCCATCCACCTACCTAGCCC 60.105 60.000 0.00 0.00 0.00 5.19
897 978 1.472662 CCATCCACCTACCTAGCCCG 61.473 65.000 0.00 0.00 0.00 6.13
899 980 3.912907 CCACCTACCTAGCCCGCG 61.913 72.222 0.00 0.00 0.00 6.46
922 1003 1.133982 CAGCTAGTCGTGTCAGCATCT 59.866 52.381 0.00 0.00 37.78 2.90
974 1055 2.801631 GCCGCTAGATCCAGCCACT 61.802 63.158 7.59 0.00 38.37 4.00
975 1056 1.826024 CCGCTAGATCCAGCCACTT 59.174 57.895 7.59 0.00 38.37 3.16
976 1057 1.040646 CCGCTAGATCCAGCCACTTA 58.959 55.000 7.59 0.00 38.37 2.24
977 1058 1.269831 CCGCTAGATCCAGCCACTTAC 60.270 57.143 7.59 0.00 38.37 2.34
981 1062 1.146263 GATCCAGCCACTTACCCGG 59.854 63.158 0.00 0.00 0.00 5.73
987 1068 4.807039 CCACTTACCCGGCGGTCG 62.807 72.222 26.32 13.26 43.29 4.79
988 1069 4.060038 CACTTACCCGGCGGTCGT 62.060 66.667 26.32 18.77 43.29 4.34
989 1070 3.752339 ACTTACCCGGCGGTCGTC 61.752 66.667 26.32 0.00 43.29 4.20
1031 1121 2.892425 CGAGGAGTTCATGGCGGC 60.892 66.667 0.00 0.00 0.00 6.53
1189 1285 1.685517 TCATGATCCTGCTCGAGAAGG 59.314 52.381 31.29 31.29 42.59 3.46
1382 1496 2.508663 GTACAACGAGCGGGAGGC 60.509 66.667 0.00 0.00 44.05 4.70
1391 1505 4.143333 GCGGGAGGCGAGTGCTTA 62.143 66.667 0.00 0.00 42.25 3.09
1392 1506 2.815308 CGGGAGGCGAGTGCTTAT 59.185 61.111 0.00 0.00 42.25 1.73
1394 1508 0.387929 CGGGAGGCGAGTGCTTATTA 59.612 55.000 0.00 0.00 42.25 0.98
1397 1511 2.474816 GGAGGCGAGTGCTTATTACTG 58.525 52.381 0.00 0.00 42.25 2.74
1401 1515 2.223971 GGCGAGTGCTTATTACTGCCTA 60.224 50.000 0.00 0.00 42.25 3.93
1405 1533 4.440250 CGAGTGCTTATTACTGCCTAGTGT 60.440 45.833 0.00 0.00 37.78 3.55
1612 1792 2.030958 CCCCGTTGTGAAGGTACGC 61.031 63.158 0.00 0.00 0.00 4.42
1615 1795 0.938713 CCGTTGTGAAGGTACGCAAA 59.061 50.000 0.00 0.00 40.95 3.68
1616 1796 1.333435 CCGTTGTGAAGGTACGCAAAC 60.333 52.381 0.00 0.00 40.95 2.93
1629 1809 0.984109 CGCAAACGCAATCAATCCAC 59.016 50.000 0.00 0.00 0.00 4.02
1660 1843 3.393250 CGCGCATCTAGCTCGCTG 61.393 66.667 8.75 0.04 45.06 5.18
1662 1845 2.279054 CGCATCTAGCTCGCTGCA 60.279 61.111 13.60 0.00 45.94 4.41
1733 2213 0.309922 CATGTTCCATCATCGCCTGC 59.690 55.000 0.00 0.00 0.00 4.85
1743 2223 3.438017 ATCGCCTGCTCGCTCCTTC 62.438 63.158 0.00 0.00 0.00 3.46
1757 2237 1.003718 CCTTCGTTTTCTCCGCCCT 60.004 57.895 0.00 0.00 0.00 5.19
1758 2238 1.298859 CCTTCGTTTTCTCCGCCCTG 61.299 60.000 0.00 0.00 0.00 4.45
1759 2239 0.602905 CTTCGTTTTCTCCGCCCTGT 60.603 55.000 0.00 0.00 0.00 4.00
1760 2240 0.601841 TTCGTTTTCTCCGCCCTGTC 60.602 55.000 0.00 0.00 0.00 3.51
1834 2370 4.673298 TGGCAGGCACCACGTACG 62.673 66.667 15.01 15.01 33.75 3.67
1893 2446 2.457598 TCGATCCTATCCTACCATGGC 58.542 52.381 13.04 0.00 0.00 4.40
1896 2449 3.627492 CGATCCTATCCTACCATGGCCTA 60.627 52.174 13.04 0.00 0.00 3.93
1897 2450 4.561752 GATCCTATCCTACCATGGCCTAT 58.438 47.826 13.04 3.12 0.00 2.57
1917 2470 5.236263 CCTATTTTTGTTTGCAACTTGGACC 59.764 40.000 0.00 0.00 33.82 4.46
1940 2495 1.153978 GTTGCCACATGACATGCCG 60.154 57.895 15.49 6.89 0.00 5.69
1995 2551 0.026803 GATCGGCTTGTTTGCTAGCG 59.973 55.000 10.77 0.00 42.87 4.26
1996 2552 1.369091 ATCGGCTTGTTTGCTAGCGG 61.369 55.000 10.77 0.00 42.87 5.52
2002 2560 0.036388 TTGTTTGCTAGCGGGAGAGG 60.036 55.000 10.77 0.00 0.00 3.69
2028 2591 1.069090 TGAGCCCGTGACTGACAAC 59.931 57.895 0.00 0.00 0.00 3.32
2029 2592 1.367840 GAGCCCGTGACTGACAACT 59.632 57.895 0.00 0.00 0.00 3.16
2031 2594 1.069090 GCCCGTGACTGACAACTGA 59.931 57.895 0.00 0.00 0.00 3.41
2032 2595 1.222115 GCCCGTGACTGACAACTGAC 61.222 60.000 0.00 0.00 0.00 3.51
2033 2596 0.939577 CCCGTGACTGACAACTGACG 60.940 60.000 0.00 0.00 0.00 4.35
2034 2597 0.030235 CCGTGACTGACAACTGACGA 59.970 55.000 0.00 0.00 0.00 4.20
2035 2598 1.399572 CGTGACTGACAACTGACGAG 58.600 55.000 0.00 0.00 0.00 4.18
2036 2599 1.132588 GTGACTGACAACTGACGAGC 58.867 55.000 0.00 0.00 0.00 5.03
2037 2600 0.317854 TGACTGACAACTGACGAGCG 60.318 55.000 0.00 0.00 0.00 5.03
2039 2602 0.595053 ACTGACAACTGACGAGCGTG 60.595 55.000 0.00 0.00 0.00 5.34
2040 2603 1.880601 CTGACAACTGACGAGCGTGC 61.881 60.000 0.00 0.00 0.00 5.34
2042 2605 1.609840 GACAACTGACGAGCGTGCTC 61.610 60.000 11.81 11.81 39.55 4.26
2043 2606 1.372251 CAACTGACGAGCGTGCTCT 60.372 57.895 18.79 6.87 40.69 4.09
2044 2607 1.372251 AACTGACGAGCGTGCTCTG 60.372 57.895 18.79 14.27 40.69 3.35
2045 2608 3.177920 CTGACGAGCGTGCTCTGC 61.178 66.667 18.79 11.13 40.69 4.26
2046 2609 4.724602 TGACGAGCGTGCTCTGCC 62.725 66.667 18.79 8.69 40.69 4.85
2053 2616 4.880537 CGTGCTCTGCCGGCCTAG 62.881 72.222 26.77 21.83 0.00 3.02
2059 2622 1.202651 GCTCTGCCGGCCTAGATAAAA 60.203 52.381 26.77 0.00 0.00 1.52
2087 2650 2.801111 GAGAACTATTCCCGCGATTTCC 59.199 50.000 8.23 0.00 0.00 3.13
2095 2658 1.514014 CCGCGATTTCCTTTTGGCG 60.514 57.895 8.23 0.00 42.92 5.69
2140 2718 4.767409 ACAGGAAAAATGGTAGCTCCTTTC 59.233 41.667 0.00 0.00 34.18 2.62
2157 2735 4.222810 TCCTTTCTTTCTGTGGATCGATCA 59.777 41.667 25.93 10.23 0.00 2.92
2169 2747 0.966920 ATCGATCACCCCATACCGAC 59.033 55.000 0.00 0.00 0.00 4.79
2286 3108 0.253327 GAAGAGAATCCCGGCCTTGT 59.747 55.000 0.00 0.00 33.66 3.16
2287 3109 0.253327 AAGAGAATCCCGGCCTTGTC 59.747 55.000 0.00 0.00 33.66 3.18
2288 3110 1.521681 GAGAATCCCGGCCTTGTCG 60.522 63.158 0.00 0.00 0.00 4.35
2289 3111 1.956629 GAGAATCCCGGCCTTGTCGA 61.957 60.000 0.00 0.00 29.41 4.20
2302 3124 2.860735 CCTTGTCGATCTAAAGCCGAAG 59.139 50.000 0.00 0.00 33.91 3.79
2341 3163 0.037326 TGGAGCAATGACACCGTCTC 60.037 55.000 0.00 0.00 33.15 3.36
2372 3194 4.025401 GACGCGCCAAACCACCTG 62.025 66.667 5.73 0.00 0.00 4.00
2379 3201 2.736531 CAAACCACCTGCTTGGCC 59.263 61.111 0.00 0.00 40.77 5.36
2406 3228 4.474846 CCGCCGGCCGTTGATTTG 62.475 66.667 26.12 7.77 34.38 2.32
2407 3229 3.732892 CGCCGGCCGTTGATTTGT 61.733 61.111 26.12 0.00 0.00 2.83
2408 3230 2.392181 CGCCGGCCGTTGATTTGTA 61.392 57.895 26.12 0.00 0.00 2.41
2409 3231 1.135939 GCCGGCCGTTGATTTGTAC 59.864 57.895 26.12 0.00 0.00 2.90
2427 3256 4.409766 GTACGTACGTACTCACTACTCG 57.590 50.000 38.40 9.24 45.30 4.18
2459 3305 1.206371 GCCATCTGCTCTTTGCCATTT 59.794 47.619 0.00 0.00 42.00 2.32
2472 3318 5.526111 TCTTTGCCATTTACTTCCGCTATAC 59.474 40.000 0.00 0.00 0.00 1.47
2494 3340 4.025480 ACGTAGTAACTCTTTTGTTTGCGG 60.025 41.667 0.00 0.00 41.94 5.69
2505 3351 3.296322 TTGTTTGCGGCAGAATTTAGG 57.704 42.857 1.67 0.00 0.00 2.69
2507 3353 3.088532 TGTTTGCGGCAGAATTTAGGAT 58.911 40.909 1.67 0.00 0.00 3.24
2508 3354 3.509575 TGTTTGCGGCAGAATTTAGGATT 59.490 39.130 1.67 0.00 0.00 3.01
2534 3380 9.939802 TTTTTATTCCTCAAGTAGTACTTCCTC 57.060 33.333 12.75 0.00 36.03 3.71
2535 3381 7.657023 TTATTCCTCAAGTAGTACTTCCTCC 57.343 40.000 12.75 0.00 36.03 4.30
2536 3382 3.618351 TCCTCAAGTAGTACTTCCTCCG 58.382 50.000 12.75 2.06 36.03 4.63
2537 3383 3.009916 TCCTCAAGTAGTACTTCCTCCGT 59.990 47.826 12.75 0.00 36.03 4.69
2539 3385 4.142425 CCTCAAGTAGTACTTCCTCCGTTC 60.142 50.000 12.75 0.00 36.03 3.95
2541 3387 2.363683 AGTAGTACTTCCTCCGTTCGG 58.636 52.381 0.00 4.74 0.00 4.30
2542 3388 2.026822 AGTAGTACTTCCTCCGTTCGGA 60.027 50.000 13.34 13.34 0.00 4.55
2543 3389 1.915141 AGTACTTCCTCCGTTCGGAA 58.085 50.000 14.79 0.00 38.18 4.30
2544 3390 2.454538 AGTACTTCCTCCGTTCGGAAT 58.545 47.619 14.79 2.09 39.64 3.01
2545 3391 2.830321 AGTACTTCCTCCGTTCGGAATT 59.170 45.455 14.79 0.00 39.64 2.17
2546 3392 4.019174 AGTACTTCCTCCGTTCGGAATTA 58.981 43.478 14.79 1.22 39.64 1.40
2547 3393 3.242549 ACTTCCTCCGTTCGGAATTAC 57.757 47.619 14.79 0.00 39.64 1.89
2548 3394 2.830321 ACTTCCTCCGTTCGGAATTACT 59.170 45.455 14.79 0.00 39.64 2.24
2549 3395 3.260128 ACTTCCTCCGTTCGGAATTACTT 59.740 43.478 14.79 0.00 39.64 2.24
2550 3396 4.463891 ACTTCCTCCGTTCGGAATTACTTA 59.536 41.667 14.79 0.00 39.64 2.24
2551 3397 5.128335 ACTTCCTCCGTTCGGAATTACTTAT 59.872 40.000 14.79 0.00 39.64 1.73
2552 3398 5.192327 TCCTCCGTTCGGAATTACTTATC 57.808 43.478 14.79 0.00 33.41 1.75
2553 3399 4.646040 TCCTCCGTTCGGAATTACTTATCA 59.354 41.667 14.79 0.00 33.41 2.15
2554 3400 4.743644 CCTCCGTTCGGAATTACTTATCAC 59.256 45.833 14.79 0.00 33.41 3.06
2555 3401 5.327616 TCCGTTCGGAATTACTTATCACA 57.672 39.130 11.66 0.00 0.00 3.58
2556 3402 5.722263 TCCGTTCGGAATTACTTATCACAA 58.278 37.500 11.66 0.00 0.00 3.33
2557 3403 6.164876 TCCGTTCGGAATTACTTATCACAAA 58.835 36.000 11.66 0.00 0.00 2.83
2558 3404 6.649973 TCCGTTCGGAATTACTTATCACAAAA 59.350 34.615 11.66 0.00 0.00 2.44
2559 3405 7.172875 TCCGTTCGGAATTACTTATCACAAAAA 59.827 33.333 11.66 0.00 0.00 1.94
2560 3406 7.966204 CCGTTCGGAATTACTTATCACAAAAAT 59.034 33.333 5.19 0.00 0.00 1.82
2561 3407 9.976255 CGTTCGGAATTACTTATCACAAAAATA 57.024 29.630 0.00 0.00 0.00 1.40
2606 3452 7.916128 ACATCTAGATACGTTCATTTCTTCG 57.084 36.000 4.54 0.00 0.00 3.79
2607 3453 7.704271 ACATCTAGATACGTTCATTTCTTCGA 58.296 34.615 4.54 0.00 0.00 3.71
2608 3454 7.644551 ACATCTAGATACGTTCATTTCTTCGAC 59.355 37.037 4.54 0.00 0.00 4.20
2609 3455 7.080353 TCTAGATACGTTCATTTCTTCGACA 57.920 36.000 0.00 0.00 0.00 4.35
2610 3456 7.532571 TCTAGATACGTTCATTTCTTCGACAA 58.467 34.615 0.00 0.00 0.00 3.18
2611 3457 8.024865 TCTAGATACGTTCATTTCTTCGACAAA 58.975 33.333 0.00 0.00 0.00 2.83
2612 3458 7.596749 AGATACGTTCATTTCTTCGACAAAT 57.403 32.000 0.00 0.00 0.00 2.32
2613 3459 8.697846 AGATACGTTCATTTCTTCGACAAATA 57.302 30.769 0.00 0.00 0.00 1.40
2614 3460 9.146984 AGATACGTTCATTTCTTCGACAAATAA 57.853 29.630 0.00 0.00 0.00 1.40
2615 3461 9.916397 GATACGTTCATTTCTTCGACAAATAAT 57.084 29.630 0.00 0.00 0.00 1.28
2617 3463 8.655378 ACGTTCATTTCTTCGACAAATAATTC 57.345 30.769 2.00 0.00 0.00 2.17
2618 3464 7.749126 ACGTTCATTTCTTCGACAAATAATTCC 59.251 33.333 2.00 0.00 0.00 3.01
2619 3465 7.045612 CGTTCATTTCTTCGACAAATAATTCCG 60.046 37.037 2.00 0.00 0.00 4.30
2620 3466 7.603963 TCATTTCTTCGACAAATAATTCCGA 57.396 32.000 2.00 0.00 0.00 4.55
2621 3467 8.035165 TCATTTCTTCGACAAATAATTCCGAA 57.965 30.769 0.00 0.00 37.61 4.30
2622 3468 7.960738 TCATTTCTTCGACAAATAATTCCGAAC 59.039 33.333 0.00 0.00 35.71 3.95
2623 3469 5.444586 TCTTCGACAAATAATTCCGAACG 57.555 39.130 0.00 0.00 35.71 3.95
2624 3470 4.327898 TCTTCGACAAATAATTCCGAACGG 59.672 41.667 6.94 6.94 35.71 4.44
2625 3471 3.847542 TCGACAAATAATTCCGAACGGA 58.152 40.909 12.04 12.04 43.52 4.69
2626 3472 3.861113 TCGACAAATAATTCCGAACGGAG 59.139 43.478 15.34 5.60 46.06 4.63
2627 3473 3.000925 CGACAAATAATTCCGAACGGAGG 59.999 47.826 15.34 4.52 46.06 4.30
2628 3474 3.275999 ACAAATAATTCCGAACGGAGGG 58.724 45.455 15.34 5.11 46.06 4.30
2629 3475 3.054948 ACAAATAATTCCGAACGGAGGGA 60.055 43.478 15.34 2.49 46.06 4.20
2630 3476 3.470645 AATAATTCCGAACGGAGGGAG 57.529 47.619 15.34 0.00 46.06 4.30
2631 3477 1.856629 TAATTCCGAACGGAGGGAGT 58.143 50.000 15.34 4.12 46.06 3.85
2632 3478 1.856629 AATTCCGAACGGAGGGAGTA 58.143 50.000 15.34 1.05 46.06 2.59
2633 3479 1.109609 ATTCCGAACGGAGGGAGTAC 58.890 55.000 15.34 0.00 46.06 2.73
2645 3491 6.829849 ACGGAGGGAGTACTATATATAGAGC 58.170 44.000 23.70 15.42 34.50 4.09
2674 3531 4.521075 CTGACGTACAGGCCATGG 57.479 61.111 7.63 7.63 42.39 3.66
2678 3535 3.195002 CGTACAGGCCATGGCACG 61.195 66.667 36.56 31.09 44.11 5.34
2772 3630 0.447406 TCATGCCGTCGAAAATGCTG 59.553 50.000 0.00 0.00 0.00 4.41
2774 3632 1.396648 CATGCCGTCGAAAATGCTGTA 59.603 47.619 0.00 0.00 0.00 2.74
2781 3647 1.208535 TCGAAAATGCTGTACCCCGAT 59.791 47.619 0.00 0.00 0.00 4.18
2782 3648 1.597663 CGAAAATGCTGTACCCCGATC 59.402 52.381 0.00 0.00 0.00 3.69
2783 3649 1.947456 GAAAATGCTGTACCCCGATCC 59.053 52.381 0.00 0.00 0.00 3.36
2784 3650 0.916086 AAATGCTGTACCCCGATCCA 59.084 50.000 0.00 0.00 0.00 3.41
2861 3742 1.679305 GAGGAGGAGGCGTGACAGA 60.679 63.158 0.00 0.00 0.00 3.41
2862 3743 1.939769 GAGGAGGAGGCGTGACAGAC 61.940 65.000 0.00 0.00 0.00 3.51
2863 3744 2.276116 GGAGGAGGCGTGACAGACA 61.276 63.158 0.00 0.00 0.00 3.41
2866 3748 1.373497 GGAGGCGTGACAGACAGTG 60.373 63.158 0.00 0.00 0.00 3.66
2883 3765 2.228480 TGGGTCAGGTTAGGTGGCC 61.228 63.158 0.00 0.00 39.13 5.36
2884 3766 2.267961 GGTCAGGTTAGGTGGCCG 59.732 66.667 0.00 0.00 27.80 6.13
2887 3769 2.267961 CAGGTTAGGTGGCCGGAC 59.732 66.667 5.05 0.56 0.00 4.79
2889 3771 4.105553 GGTTAGGTGGCCGGACCC 62.106 72.222 3.83 5.59 36.56 4.46
2890 3772 3.324108 GTTAGGTGGCCGGACCCA 61.324 66.667 16.25 7.15 36.56 4.51
2891 3773 2.285818 TTAGGTGGCCGGACCCAT 60.286 61.111 16.25 0.00 37.20 4.00
2892 3774 1.926489 TTAGGTGGCCGGACCCATT 60.926 57.895 16.25 5.66 37.20 3.16
2894 3776 1.502527 TAGGTGGCCGGACCCATTTT 61.503 55.000 16.25 0.00 37.20 1.82
2895 3777 1.911269 GGTGGCCGGACCCATTTTT 60.911 57.895 3.83 0.00 37.20 1.94
2946 4106 1.460273 AATTTGGCCCGAAGCACGTT 61.460 50.000 0.00 0.00 46.50 3.99
2967 4132 0.674895 GAGCACCTCGATTGGTTGCT 60.675 55.000 15.60 15.60 42.58 3.91
3019 4464 0.457166 CAAGCATGCATGTTGTCCCG 60.457 55.000 26.79 5.79 0.00 5.14
3020 4465 1.597797 AAGCATGCATGTTGTCCCGG 61.598 55.000 26.79 0.00 0.00 5.73
3022 4467 1.029408 GCATGCATGTTGTCCCGGTA 61.029 55.000 26.79 0.00 0.00 4.02
3110 5338 7.793927 AAAGTAGAAAAGGTGAGAGACTTTG 57.206 36.000 0.00 0.00 37.04 2.77
3164 5585 2.625906 CGTTGCCTCGTGTGTGTG 59.374 61.111 0.00 0.00 0.00 3.82
3165 5586 2.171079 CGTTGCCTCGTGTGTGTGT 61.171 57.895 0.00 0.00 0.00 3.72
3166 5587 1.351707 GTTGCCTCGTGTGTGTGTG 59.648 57.895 0.00 0.00 0.00 3.82
3210 5631 4.476410 TAGCTGGCACGACGCTCG 62.476 66.667 1.90 5.97 46.93 5.03
3275 5720 2.464157 TGTGGTGATAATGTGTGCGA 57.536 45.000 0.00 0.00 0.00 5.10
3282 5727 1.521423 GATAATGTGTGCGACGTAGCC 59.479 52.381 18.26 9.85 36.02 3.93
3283 5728 0.528924 TAATGTGTGCGACGTAGCCT 59.471 50.000 18.26 0.00 36.02 4.58
3285 5730 3.479269 GTGTGCGACGTAGCCTGC 61.479 66.667 18.26 8.83 36.02 4.85
3286 5731 3.680786 TGTGCGACGTAGCCTGCT 61.681 61.111 18.26 0.00 36.02 4.24
3287 5732 2.337246 TGTGCGACGTAGCCTGCTA 61.337 57.895 18.26 0.00 36.02 3.49
3290 5752 2.026301 CGACGTAGCCTGCTAGCC 59.974 66.667 13.29 0.00 0.00 3.93
3292 5754 3.486252 GACGTAGCCTGCTAGCCCG 62.486 68.421 13.29 2.72 34.75 6.13
3311 5773 1.797348 CGCTCCTGTTTTGTTGCGTTT 60.797 47.619 0.00 0.00 38.81 3.60
3398 5869 0.680921 GCTGCCTTTGGTGCCATCTA 60.681 55.000 0.00 0.00 0.00 1.98
3399 5870 1.386533 CTGCCTTTGGTGCCATCTAG 58.613 55.000 0.00 0.00 0.00 2.43
3400 5871 0.034186 TGCCTTTGGTGCCATCTAGG 60.034 55.000 9.05 9.05 41.84 3.02
3401 5872 0.753111 GCCTTTGGTGCCATCTAGGG 60.753 60.000 13.07 2.29 38.09 3.53
3402 5873 0.918983 CCTTTGGTGCCATCTAGGGA 59.081 55.000 0.00 0.00 38.09 4.20
3403 5874 1.496429 CCTTTGGTGCCATCTAGGGAT 59.504 52.381 0.00 0.00 41.14 3.85
3404 5875 2.579873 CTTTGGTGCCATCTAGGGATG 58.420 52.381 0.00 0.00 46.41 3.51
3405 5876 0.183492 TTGGTGCCATCTAGGGATGC 59.817 55.000 0.00 0.00 45.73 3.91
3408 5879 1.602311 GTGCCATCTAGGGATGCAAG 58.398 55.000 0.00 0.00 45.73 4.01
3409 5880 0.179009 TGCCATCTAGGGATGCAAGC 60.179 55.000 0.00 0.97 45.73 4.01
3410 5881 1.233285 GCCATCTAGGGATGCAAGCG 61.233 60.000 0.00 0.00 45.73 4.68
3411 5882 0.604780 CCATCTAGGGATGCAAGCGG 60.605 60.000 0.00 0.00 45.73 5.52
3412 5883 1.072159 ATCTAGGGATGCAAGCGGC 59.928 57.895 0.00 0.00 45.13 6.53
3448 5919 4.205334 CGCGAAACGAACAAATTAGTTCA 58.795 39.130 0.00 0.00 46.32 3.18
3449 5920 4.084718 CGCGAAACGAACAAATTAGTTCAC 59.915 41.667 0.00 0.00 46.32 3.18
3450 5921 4.965158 GCGAAACGAACAAATTAGTTCACA 59.035 37.500 7.49 0.00 46.32 3.58
3451 5922 5.452944 GCGAAACGAACAAATTAGTTCACAA 59.547 36.000 7.49 0.00 46.32 3.33
3452 5923 6.557171 GCGAAACGAACAAATTAGTTCACAAC 60.557 38.462 7.49 0.00 46.32 3.32
3487 5958 2.967946 GCCGTTGGAGGGGCTTAGT 61.968 63.158 0.00 0.00 45.93 2.24
3500 5971 3.418047 GGGCTTAGTGTGTGTTTGGTAT 58.582 45.455 0.00 0.00 0.00 2.73
3501 5972 4.566070 GGGGCTTAGTGTGTGTTTGGTATA 60.566 45.833 0.00 0.00 0.00 1.47
3504 5975 6.400568 GGCTTAGTGTGTGTTTGGTATAGTA 58.599 40.000 0.00 0.00 0.00 1.82
3528 5999 1.093159 GAGGGTGCATGAGCTCAAAG 58.907 55.000 22.50 17.25 42.74 2.77
3534 6005 2.294233 GTGCATGAGCTCAAAGGTTTCA 59.706 45.455 22.50 0.95 42.74 2.69
3543 6014 6.716628 TGAGCTCAAAGGTTTCATACTCAATT 59.283 34.615 15.67 0.00 0.00 2.32
3544 6015 7.231317 TGAGCTCAAAGGTTTCATACTCAATTT 59.769 33.333 15.67 0.00 0.00 1.82
3562 6033 8.414778 ACTCAATTTATTTTTCGGTGTTTGGTA 58.585 29.630 0.00 0.00 0.00 3.25
3563 6034 8.804688 TCAATTTATTTTTCGGTGTTTGGTAG 57.195 30.769 0.00 0.00 0.00 3.18
3564 6035 7.382759 TCAATTTATTTTTCGGTGTTTGGTAGC 59.617 33.333 0.00 0.00 0.00 3.58
3565 6036 3.653539 ATTTTTCGGTGTTTGGTAGCC 57.346 42.857 0.00 0.00 0.00 3.93
3566 6037 2.351706 TTTTCGGTGTTTGGTAGCCT 57.648 45.000 0.00 0.00 0.00 4.58
3567 6038 1.600023 TTTCGGTGTTTGGTAGCCTG 58.400 50.000 0.00 0.00 0.00 4.85
3568 6039 0.887387 TTCGGTGTTTGGTAGCCTGC 60.887 55.000 0.00 0.00 0.00 4.85
3569 6040 1.599518 CGGTGTTTGGTAGCCTGCA 60.600 57.895 0.00 0.00 0.00 4.41
3570 6041 1.852067 CGGTGTTTGGTAGCCTGCAC 61.852 60.000 0.00 0.00 0.00 4.57
3571 6042 1.574428 GTGTTTGGTAGCCTGCACG 59.426 57.895 0.00 0.00 0.00 5.34
3572 6043 0.882927 GTGTTTGGTAGCCTGCACGA 60.883 55.000 0.00 0.00 0.00 4.35
3573 6044 0.602638 TGTTTGGTAGCCTGCACGAG 60.603 55.000 0.00 0.00 0.00 4.18
3574 6045 1.671054 TTTGGTAGCCTGCACGAGC 60.671 57.895 0.00 0.00 42.57 5.03
3575 6046 2.111999 TTTGGTAGCCTGCACGAGCT 62.112 55.000 6.36 6.41 42.74 4.09
3576 6047 2.202810 GGTAGCCTGCACGAGCTC 60.203 66.667 2.73 2.73 42.74 4.09
3583 6054 4.383861 TGCACGAGCTCAGCCCAG 62.384 66.667 21.35 4.32 42.74 4.45
3588 6059 1.365633 CGAGCTCAGCCCAGATACC 59.634 63.158 15.40 0.00 0.00 2.73
3595 6066 0.674534 CAGCCCAGATACCCTCGTAC 59.325 60.000 0.00 0.00 0.00 3.67
3612 6083 2.668457 CGTACCATGCACAAAGAGAGAC 59.332 50.000 0.00 0.00 0.00 3.36
3625 6096 2.529632 AGAGAGACACACCACAGCATA 58.470 47.619 0.00 0.00 0.00 3.14
3632 6103 0.673644 ACACCACAGCATAGTTCGCC 60.674 55.000 0.00 0.00 0.00 5.54
3638 6109 1.284657 CAGCATAGTTCGCCTGTCAG 58.715 55.000 0.00 0.00 0.00 3.51
3650 6121 2.743538 TGTCAGCATGCACGAGCC 60.744 61.111 21.98 5.70 41.13 4.70
3671 6142 1.843992 AGTAAGCGACGACGTGTTTT 58.156 45.000 4.58 0.00 41.98 2.43
3953 6703 7.625828 AAAAACTGATTGCTATAGTACCACC 57.374 36.000 0.84 0.00 0.00 4.61
3963 6713 4.320348 GCTATAGTACCACCGACATGTCTC 60.320 50.000 22.95 0.00 0.00 3.36
4001 6869 2.469274 ACAGAGTCTCAGCATGGTTG 57.531 50.000 1.94 0.00 36.16 3.77
4002 6870 1.696336 ACAGAGTCTCAGCATGGTTGT 59.304 47.619 1.94 0.00 36.16 3.32
4004 6872 2.740981 CAGAGTCTCAGCATGGTTGTTC 59.259 50.000 1.94 0.00 36.16 3.18
4011 6879 3.340928 TCAGCATGGTTGTTCTCATCTG 58.659 45.455 0.00 0.00 36.16 2.90
4012 6880 3.008266 TCAGCATGGTTGTTCTCATCTGA 59.992 43.478 0.00 0.00 36.16 3.27
4013 6881 3.945921 CAGCATGGTTGTTCTCATCTGAT 59.054 43.478 0.00 0.00 0.00 2.90
4015 6883 5.007430 CAGCATGGTTGTTCTCATCTGATAC 59.993 44.000 0.00 0.00 0.00 2.24
4017 6885 5.530171 GCATGGTTGTTCTCATCTGATACAT 59.470 40.000 0.00 0.00 0.00 2.29
4018 6886 6.512903 GCATGGTTGTTCTCATCTGATACATG 60.513 42.308 0.00 0.00 35.28 3.21
4019 6887 4.877823 TGGTTGTTCTCATCTGATACATGC 59.122 41.667 0.00 0.00 0.00 4.06
4020 6888 5.121811 GGTTGTTCTCATCTGATACATGCT 58.878 41.667 0.00 0.00 0.00 3.79
4021 6889 5.007430 GGTTGTTCTCATCTGATACATGCTG 59.993 44.000 0.00 0.00 0.00 4.41
4022 6890 5.603170 TGTTCTCATCTGATACATGCTGA 57.397 39.130 0.00 0.00 0.00 4.26
4023 6891 5.598769 TGTTCTCATCTGATACATGCTGAG 58.401 41.667 0.00 0.00 33.16 3.35
4024 6892 5.128335 TGTTCTCATCTGATACATGCTGAGT 59.872 40.000 0.00 0.00 33.53 3.41
4027 6895 5.829924 TCTCATCTGATACATGCTGAGTGTA 59.170 40.000 0.00 0.00 36.58 2.90
4028 6896 6.016443 TCTCATCTGATACATGCTGAGTGTAG 60.016 42.308 0.00 0.00 35.69 2.74
4050 7277 0.764890 ATATGGCCGTGTGCATACCT 59.235 50.000 8.05 0.00 43.89 3.08
4193 7583 8.177119 ACTTGTGGCAAACTATTATCTTGAAA 57.823 30.769 0.00 0.00 0.00 2.69
4217 8070 8.694171 AAACCCATCTTTTAATTAATTCCCCT 57.306 30.769 3.39 0.00 0.00 4.79
4218 8071 8.694171 AACCCATCTTTTAATTAATTCCCCTT 57.306 30.769 3.39 0.00 0.00 3.95
4253 8119 5.365314 TGGGCAGTCTTGAACCTTTTAAAAT 59.635 36.000 0.09 0.00 0.00 1.82
4261 8127 6.646240 TCTTGAACCTTTTAAAATGCATGAGC 59.354 34.615 0.00 0.00 42.57 4.26
4265 8131 3.549070 CCTTTTAAAATGCATGAGCGAGC 59.451 43.478 0.00 0.00 46.23 5.03
4305 8182 0.393537 GGACAGCAGATCACCCCAAG 60.394 60.000 0.00 0.00 0.00 3.61
4332 8213 3.627395 ATGCCAGATAAAACTGACCGA 57.373 42.857 0.00 0.00 39.94 4.69
4349 8230 4.082787 TGACCGAATTTTCTGCTCCATTTC 60.083 41.667 0.00 0.00 0.00 2.17
4352 8233 5.123979 ACCGAATTTTCTGCTCCATTTCTAC 59.876 40.000 0.00 0.00 0.00 2.59
4544 8425 1.378124 CCGAGTCCGACTTCCTCCTC 61.378 65.000 1.71 0.00 38.22 3.71
4565 8446 2.679287 ACCGTCCCCTTCCTCGTC 60.679 66.667 0.00 0.00 0.00 4.20
4618 8499 1.341531 CTGGAAGTTCGGTCAGTCAGT 59.658 52.381 0.00 0.00 0.00 3.41
4622 8503 0.822532 AGTTCGGTCAGTCAGTCCGT 60.823 55.000 0.00 0.00 46.85 4.69
4623 8504 0.386985 GTTCGGTCAGTCAGTCCGTC 60.387 60.000 0.00 0.00 46.85 4.79
4624 8505 1.521450 TTCGGTCAGTCAGTCCGTCC 61.521 60.000 0.00 0.00 46.85 4.79
4625 8506 2.567049 GGTCAGTCAGTCCGTCCG 59.433 66.667 0.00 0.00 0.00 4.79
4626 8507 2.266627 GGTCAGTCAGTCCGTCCGT 61.267 63.158 0.00 0.00 0.00 4.69
4627 8508 1.209640 GTCAGTCAGTCCGTCCGTC 59.790 63.158 0.00 0.00 0.00 4.79
4628 8509 1.228033 TCAGTCAGTCCGTCCGTCA 60.228 57.895 0.00 0.00 0.00 4.35
4629 8510 1.081376 CAGTCAGTCCGTCCGTCAC 60.081 63.158 0.00 0.00 0.00 3.67
4630 8511 1.228184 AGTCAGTCCGTCCGTCACT 60.228 57.895 0.00 0.00 0.00 3.41
4631 8512 1.209640 GTCAGTCCGTCCGTCACTC 59.790 63.158 0.00 0.00 0.00 3.51
4658 8539 3.126858 TGCACTCTGTTTGTTGTTCACTC 59.873 43.478 0.00 0.00 0.00 3.51
4661 8542 3.941483 ACTCTGTTTGTTGTTCACTCAGG 59.059 43.478 0.00 0.00 32.20 3.86
4662 8543 2.682856 TCTGTTTGTTGTTCACTCAGGC 59.317 45.455 0.00 0.00 32.20 4.85
4664 8545 2.163412 TGTTTGTTGTTCACTCAGGCAC 59.837 45.455 0.00 0.00 0.00 5.01
4666 8547 2.121291 TGTTGTTCACTCAGGCACAA 57.879 45.000 0.00 0.00 0.00 3.33
4667 8548 2.016318 TGTTGTTCACTCAGGCACAAG 58.984 47.619 0.00 0.00 29.85 3.16
4668 8549 1.024271 TTGTTCACTCAGGCACAAGC 58.976 50.000 0.00 0.00 41.10 4.01
4673 8554 0.816825 CACTCAGGCACAAGCACACT 60.817 55.000 0.00 0.00 44.61 3.55
4679 8560 0.029834 GGCACAAGCACACTGTTCTG 59.970 55.000 0.00 0.00 44.61 3.02
4680 8561 1.016627 GCACAAGCACACTGTTCTGA 58.983 50.000 0.00 0.00 41.58 3.27
4681 8562 1.401552 GCACAAGCACACTGTTCTGAA 59.598 47.619 0.00 0.00 41.58 3.02
4730 8611 2.206750 TGTTGTGCAGTTAACTCGGAC 58.793 47.619 4.77 12.81 0.00 4.79
4857 8738 3.871006 GCACACTCGGTTTCATCATCATA 59.129 43.478 0.00 0.00 0.00 2.15
4862 8743 7.115520 CACACTCGGTTTCATCATCATATAGAC 59.884 40.741 0.00 0.00 0.00 2.59
4917 9004 1.689273 TGAACCGTTGGGGATTTTTGG 59.311 47.619 0.00 0.00 39.97 3.28
4950 9037 2.808315 CCGGTGTCTGGAGGATCG 59.192 66.667 0.00 0.00 34.37 3.69
5075 9163 3.231160 CGCCGTAAAAGTAAGCCAAAAG 58.769 45.455 0.00 0.00 0.00 2.27
5076 9165 3.058777 CGCCGTAAAAGTAAGCCAAAAGA 60.059 43.478 0.00 0.00 0.00 2.52
5086 9175 6.018589 AGTAAGCCAAAAGAAATGCTCTTC 57.981 37.500 0.00 0.00 44.00 2.87
5102 9195 8.572855 AATGCTCTTCTATTTACTTGCTTCTT 57.427 30.769 0.00 0.00 0.00 2.52
5103 9196 7.602517 TGCTCTTCTATTTACTTGCTTCTTC 57.397 36.000 0.00 0.00 0.00 2.87
5104 9197 7.390027 TGCTCTTCTATTTACTTGCTTCTTCT 58.610 34.615 0.00 0.00 0.00 2.85
5119 9212 7.606858 TGCTTCTTCTCTGTCAGAAATAATG 57.393 36.000 3.67 0.00 40.83 1.90
5120 9213 7.164122 TGCTTCTTCTCTGTCAGAAATAATGT 58.836 34.615 3.67 0.00 40.83 2.71
5122 9215 9.155975 GCTTCTTCTCTGTCAGAAATAATGTAA 57.844 33.333 3.67 0.00 40.83 2.41
5124 9217 8.709386 TCTTCTCTGTCAGAAATAATGTAAGC 57.291 34.615 3.67 0.00 40.83 3.09
5125 9218 8.314021 TCTTCTCTGTCAGAAATAATGTAAGCA 58.686 33.333 3.67 0.00 40.83 3.91
5126 9219 9.107177 CTTCTCTGTCAGAAATAATGTAAGCAT 57.893 33.333 3.67 0.00 40.83 3.79
5127 9220 8.429493 TCTCTGTCAGAAATAATGTAAGCATG 57.571 34.615 3.67 0.00 35.15 4.06
5128 9221 7.496920 TCTCTGTCAGAAATAATGTAAGCATGG 59.503 37.037 3.67 0.00 35.15 3.66
5129 9222 7.337938 TCTGTCAGAAATAATGTAAGCATGGA 58.662 34.615 0.00 0.00 35.15 3.41
5130 9223 7.496920 TCTGTCAGAAATAATGTAAGCATGGAG 59.503 37.037 0.00 0.00 35.15 3.86
5131 9224 7.112122 TGTCAGAAATAATGTAAGCATGGAGT 58.888 34.615 0.00 0.00 35.15 3.85
5132 9225 8.264347 TGTCAGAAATAATGTAAGCATGGAGTA 58.736 33.333 0.00 0.00 35.15 2.59
5133 9226 8.552034 GTCAGAAATAATGTAAGCATGGAGTAC 58.448 37.037 0.00 0.00 35.15 2.73
5134 9227 8.264347 TCAGAAATAATGTAAGCATGGAGTACA 58.736 33.333 0.00 0.00 35.15 2.90
5135 9228 8.554528 CAGAAATAATGTAAGCATGGAGTACAG 58.445 37.037 0.00 0.00 35.15 2.74
5136 9229 8.267894 AGAAATAATGTAAGCATGGAGTACAGT 58.732 33.333 0.00 0.00 35.15 3.55
5145 9238 3.071602 GCATGGAGTACAGTACCCATCAT 59.928 47.826 21.89 12.38 37.52 2.45
5339 9435 1.002069 AAGGGAGGATGCATCACCAA 58.998 50.000 29.80 0.00 0.00 3.67
5343 9439 1.410648 GGAGGATGCATCACCAACCAT 60.411 52.381 27.25 0.00 30.69 3.55
5440 9543 4.285292 TGTTGTACGACTTCTTCTTCGTC 58.715 43.478 14.38 0.00 45.10 4.20
5443 9546 2.350833 CGACTTCTTCTTCGTCGGC 58.649 57.895 0.00 0.00 44.75 5.54
5613 11100 5.163602 GGTAACAACACACATTTCAAGACCA 60.164 40.000 0.00 0.00 0.00 4.02
5770 11260 2.806237 GGTCTTCTAGACGCCGGG 59.194 66.667 2.18 0.00 45.96 5.73
5803 11293 5.163248 TGAGTGGGTTGTCACTGAGAAATTA 60.163 40.000 2.00 0.00 46.76 1.40
5990 11490 7.101054 ACTACTTCGGATTACTGCATACAAAA 58.899 34.615 0.00 0.00 0.00 2.44
6010 11511 6.973474 ACAAAATACCGATTTTCGTGTTTTCA 59.027 30.769 0.00 0.00 42.22 2.69
6081 11582 3.571401 ACTGCTCAGAGATTTTTGTTGGG 59.429 43.478 0.00 0.00 0.00 4.12
6097 11598 7.962995 TTTGTTGGGACCTGCATAATTATAA 57.037 32.000 0.00 0.00 0.00 0.98
6228 11729 4.545706 CCCAGCGCCGGATAAGCA 62.546 66.667 12.38 0.00 0.00 3.91
6229 11730 2.969238 CCAGCGCCGGATAAGCAG 60.969 66.667 5.05 0.93 0.00 4.24
6230 11731 3.643978 CAGCGCCGGATAAGCAGC 61.644 66.667 5.05 0.00 0.00 5.25
6231 11732 4.918201 AGCGCCGGATAAGCAGCC 62.918 66.667 5.05 0.00 32.62 4.85
6260 11761 0.040336 CATTCATGGCGCTCATCTGC 60.040 55.000 7.64 0.00 32.92 4.26
6379 11889 4.675146 CGGTCACATTTGATCCAACCATTC 60.675 45.833 0.00 0.00 33.11 2.67
6385 11895 6.755141 CACATTTGATCCAACCATTCATTCTC 59.245 38.462 0.00 0.00 0.00 2.87
6424 11935 3.050619 CGGTCGAAATAGCATGGTAGTC 58.949 50.000 10.82 9.12 0.00 2.59
6443 11954 5.991328 AGTCCATCAGTTAATAACATGCG 57.009 39.130 5.89 0.00 0.00 4.73
6485 12006 6.769134 TCATGACAGAAAGATGCATTCAAT 57.231 33.333 0.00 0.00 0.00 2.57
6600 12122 4.499183 ACTTACTGATGTAGCTTGCTCAC 58.501 43.478 0.00 0.00 0.00 3.51
6712 12242 7.011482 GCCATTTATAACTCTGTCGAATTCAGT 59.989 37.037 6.22 0.00 34.86 3.41
6719 12249 2.890945 TCTGTCGAATTCAGTCAGACCA 59.109 45.455 16.54 4.18 34.86 4.02
6799 12329 3.308438 AGCCTTGCAAGCAAAAGTATG 57.692 42.857 21.43 5.11 35.33 2.39
6844 12374 1.002659 CGTGGGTGGATGGAACTACAA 59.997 52.381 0.00 0.00 0.00 2.41
6847 12377 2.647299 TGGGTGGATGGAACTACAACAT 59.353 45.455 0.00 0.00 0.00 2.71
6868 12398 4.901197 TCCATTTCCACTGCTACTTGTA 57.099 40.909 0.00 0.00 0.00 2.41
6887 12417 4.093743 TGTAAGGAGAAGTAGTGATGCCA 58.906 43.478 0.00 0.00 0.00 4.92
6888 12418 4.530553 TGTAAGGAGAAGTAGTGATGCCAA 59.469 41.667 0.00 0.00 0.00 4.52
6889 12419 4.640771 AAGGAGAAGTAGTGATGCCAAA 57.359 40.909 0.00 0.00 0.00 3.28
6890 12420 4.213564 AGGAGAAGTAGTGATGCCAAAG 57.786 45.455 0.00 0.00 0.00 2.77
6891 12421 3.584848 AGGAGAAGTAGTGATGCCAAAGT 59.415 43.478 0.00 0.00 0.00 2.66
6892 12422 4.042187 AGGAGAAGTAGTGATGCCAAAGTT 59.958 41.667 0.00 0.00 0.00 2.66
6893 12423 4.762251 GGAGAAGTAGTGATGCCAAAGTTT 59.238 41.667 0.00 0.00 0.00 2.66
6894 12424 5.241728 GGAGAAGTAGTGATGCCAAAGTTTT 59.758 40.000 0.00 0.00 0.00 2.43
6895 12425 6.319141 AGAAGTAGTGATGCCAAAGTTTTC 57.681 37.500 0.00 0.00 0.00 2.29
6896 12426 5.827797 AGAAGTAGTGATGCCAAAGTTTTCA 59.172 36.000 0.00 0.00 0.00 2.69
6897 12427 6.491403 AGAAGTAGTGATGCCAAAGTTTTCAT 59.509 34.615 0.98 0.98 0.00 2.57
6898 12428 6.017400 AGTAGTGATGCCAAAGTTTTCATG 57.983 37.500 5.18 0.00 0.00 3.07
6899 12429 4.261578 AGTGATGCCAAAGTTTTCATGG 57.738 40.909 5.18 0.00 37.29 3.66
6905 12435 3.048337 CCAAAGTTTTCATGGCATGCT 57.952 42.857 22.56 10.83 0.00 3.79
6906 12436 2.739913 CCAAAGTTTTCATGGCATGCTG 59.260 45.455 22.56 9.27 0.00 4.41
6907 12437 2.088950 AAGTTTTCATGGCATGCTGC 57.911 45.000 22.56 11.86 44.08 5.25
6932 12462 1.731709 TGACGCAACATGTATGTCAGC 59.268 47.619 18.42 10.53 40.80 4.26
6935 12465 1.063027 CGCAACATGTATGTCAGCTGG 59.937 52.381 15.13 0.00 40.80 4.85
6953 12483 3.882888 GCTGGGACAATCAATCGGAAATA 59.117 43.478 0.00 0.00 38.70 1.40
6958 12488 6.833416 TGGGACAATCAATCGGAAATAGAAAT 59.167 34.615 0.00 0.00 31.92 2.17
6970 12500 7.806690 TCGGAAATAGAAATTGTTGAGACTTG 58.193 34.615 0.00 0.00 0.00 3.16
6980 12510 2.170397 TGTTGAGACTTGAGACTTGGCA 59.830 45.455 0.00 0.00 0.00 4.92
6999 12529 4.081972 TGGCAACGGCATATACAAACAAAT 60.082 37.500 0.00 0.00 43.71 2.32
7000 12530 4.502645 GGCAACGGCATATACAAACAAATC 59.497 41.667 0.00 0.00 43.71 2.17
7025 12555 9.691362 TCTTCCAAAATAAATTTCTGTTAGCAC 57.309 29.630 0.00 0.00 0.00 4.40
7042 12572 4.510038 AGCACCATGACAAGTTCATTTC 57.490 40.909 0.00 0.00 42.87 2.17
7048 12578 5.149273 CCATGACAAGTTCATTTCGACAAG 58.851 41.667 0.00 0.00 42.87 3.16
7051 12581 4.873259 TGACAAGTTCATTTCGACAAGACA 59.127 37.500 0.00 0.00 0.00 3.41
7061 12591 7.087639 TCATTTCGACAAGACAAAAACAAAGT 58.912 30.769 0.00 0.00 0.00 2.66
7099 12630 5.934043 CGTCATGATTGGCCTCTTAATATCA 59.066 40.000 3.32 2.39 0.00 2.15
7104 12635 6.069994 TGATTGGCCTCTTAATATCATGCAA 58.930 36.000 3.32 0.00 0.00 4.08
7106 12637 5.772825 TGGCCTCTTAATATCATGCAAAC 57.227 39.130 3.32 0.00 0.00 2.93
7124 12655 4.211794 GCAAACATGTGAAGATTTTGGTGG 59.788 41.667 0.00 0.00 0.00 4.61
7127 12658 5.705609 ACATGTGAAGATTTTGGTGGTAC 57.294 39.130 0.00 0.00 0.00 3.34
7129 12660 5.473504 ACATGTGAAGATTTTGGTGGTACTC 59.526 40.000 0.00 0.00 0.00 2.59
7130 12661 5.042463 TGTGAAGATTTTGGTGGTACTCA 57.958 39.130 0.00 0.00 0.00 3.41
7131 12662 5.063204 TGTGAAGATTTTGGTGGTACTCAG 58.937 41.667 0.00 0.00 0.00 3.35
7134 12665 5.306937 TGAAGATTTTGGTGGTACTCAGAGA 59.693 40.000 3.79 0.00 0.00 3.10
7139 12670 3.380479 TGGTGGTACTCAGAGAAAACG 57.620 47.619 3.79 0.00 0.00 3.60
7142 12673 4.233005 GGTGGTACTCAGAGAAAACGTAC 58.767 47.826 3.79 0.00 0.00 3.67
7160 12691 4.333649 ACGTACATGGCATGATTCTTTCAG 59.666 41.667 32.74 14.50 37.89 3.02
7195 12728 9.733556 ATACCGCATTATTTCCATTCTTATACA 57.266 29.630 0.00 0.00 0.00 2.29
7206 12739 7.728847 TCCATTCTTATACATCATTTGGACG 57.271 36.000 0.00 0.00 0.00 4.79
7207 12740 6.710295 TCCATTCTTATACATCATTTGGACGG 59.290 38.462 0.00 0.00 0.00 4.79
7208 12741 6.710295 CCATTCTTATACATCATTTGGACGGA 59.290 38.462 0.00 0.00 0.00 4.69
7209 12742 7.228507 CCATTCTTATACATCATTTGGACGGAA 59.771 37.037 0.00 0.00 0.00 4.30
7210 12743 8.620416 CATTCTTATACATCATTTGGACGGAAA 58.380 33.333 0.00 0.00 0.00 3.13
7211 12744 7.548196 TCTTATACATCATTTGGACGGAAAC 57.452 36.000 0.00 0.00 0.00 2.78
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
59 61 4.787598 CAAAACAGGAGATGAGTTTTCCG 58.212 43.478 0.00 0.00 41.86 4.30
60 62 4.550422 GCAAAACAGGAGATGAGTTTTCC 58.450 43.478 0.00 0.00 41.86 3.13
63 65 3.565307 TGGCAAAACAGGAGATGAGTTT 58.435 40.909 0.00 0.00 37.08 2.66
64 66 3.228188 TGGCAAAACAGGAGATGAGTT 57.772 42.857 0.00 0.00 0.00 3.01
65 67 2.957402 TGGCAAAACAGGAGATGAGT 57.043 45.000 0.00 0.00 0.00 3.41
80 82 4.036804 GGCGCGTTTCACATGGCA 62.037 61.111 8.43 0.00 0.00 4.92
166 181 1.512926 GCATCGACCAGTGACAAACT 58.487 50.000 0.00 0.00 40.93 2.66
167 182 0.517316 GGCATCGACCAGTGACAAAC 59.483 55.000 0.00 0.00 0.00 2.93
168 183 0.107643 TGGCATCGACCAGTGACAAA 59.892 50.000 0.00 0.00 33.75 2.83
225 241 3.676646 CCGTCCTAGTTTTAGTTTCGGTG 59.323 47.826 0.00 0.00 32.78 4.94
229 245 2.093310 GCGCCGTCCTAGTTTTAGTTTC 59.907 50.000 0.00 0.00 0.00 2.78
234 250 1.218854 GGGCGCCGTCCTAGTTTTA 59.781 57.895 22.54 0.00 0.00 1.52
236 252 4.446413 CGGGCGCCGTCCTAGTTT 62.446 66.667 22.54 0.00 42.73 2.66
247 263 4.838486 CAGACTCGACTCGGGCGC 62.838 72.222 0.00 0.00 0.00 6.53
248 264 3.384014 GACAGACTCGACTCGGGCG 62.384 68.421 0.00 0.00 0.00 6.13
249 265 2.486042 GACAGACTCGACTCGGGC 59.514 66.667 0.00 0.00 0.00 6.13
250 266 1.377463 AGGACAGACTCGACTCGGG 60.377 63.158 0.00 0.00 0.00 5.14
251 267 0.956410 ACAGGACAGACTCGACTCGG 60.956 60.000 0.00 0.00 0.00 4.63
292 308 4.680708 CGTATGTCTTTCTAGTGCCATGGT 60.681 45.833 14.67 0.00 0.00 3.55
384 407 2.650116 GGCCTTGTCTCGGCTCTCA 61.650 63.158 0.00 0.00 46.73 3.27
390 413 4.101448 CCCCAGGCCTTGTCTCGG 62.101 72.222 0.00 0.00 0.00 4.63
409 432 0.744874 GGGCGTATGACTCAGTAGCA 59.255 55.000 0.00 0.00 0.00 3.49
410 433 0.744874 TGGGCGTATGACTCAGTAGC 59.255 55.000 0.00 0.00 0.00 3.58
411 434 1.749063 TGTGGGCGTATGACTCAGTAG 59.251 52.381 0.00 0.00 0.00 2.57
412 435 1.475280 GTGTGGGCGTATGACTCAGTA 59.525 52.381 0.00 0.00 0.00 2.74
413 436 0.246635 GTGTGGGCGTATGACTCAGT 59.753 55.000 0.00 0.00 0.00 3.41
414 437 0.460284 GGTGTGGGCGTATGACTCAG 60.460 60.000 0.00 0.00 0.00 3.35
415 438 1.594833 GGTGTGGGCGTATGACTCA 59.405 57.895 0.00 0.00 0.00 3.41
416 439 1.153429 GGGTGTGGGCGTATGACTC 60.153 63.158 0.00 0.00 0.00 3.36
417 440 2.666098 GGGGTGTGGGCGTATGACT 61.666 63.158 0.00 0.00 0.00 3.41
419 442 3.776781 CGGGGTGTGGGCGTATGA 61.777 66.667 0.00 0.00 0.00 2.15
421 444 2.364056 TACGGGGTGTGGGCGTAT 60.364 61.111 0.00 0.00 0.00 3.06
422 445 3.381136 GTACGGGGTGTGGGCGTA 61.381 66.667 0.00 0.00 0.00 4.42
425 448 3.381136 TACGTACGGGGTGTGGGC 61.381 66.667 21.06 0.00 0.00 5.36
441 468 1.669502 GGTGACATGGCAACGTACGTA 60.670 52.381 23.12 6.15 42.51 3.57
491 518 7.548967 TCGTGTGTGTATTATTGGTGAAGATA 58.451 34.615 0.00 0.00 0.00 1.98
496 523 5.407084 CACTTCGTGTGTGTATTATTGGTGA 59.593 40.000 3.79 0.00 41.53 4.02
515 542 0.111639 TGGTGTTTAGGGGCCACTTC 59.888 55.000 16.00 5.05 0.00 3.01
555 582 3.009723 GTGGTGGTACTACGTGCTACTA 58.990 50.000 0.00 0.00 31.37 1.82
557 584 1.815003 AGTGGTGGTACTACGTGCTAC 59.185 52.381 0.00 0.00 34.53 3.58
561 588 0.169672 CCGAGTGGTGGTACTACGTG 59.830 60.000 0.00 0.00 34.53 4.49
578 605 1.373497 GAGCTGTGTGGAGTGTCCG 60.373 63.158 0.00 0.00 40.17 4.79
598 639 2.129146 ATGCATGGGAATGTGGCCG 61.129 57.895 0.00 0.00 0.00 6.13
611 652 1.145119 AGATGAGATGGGTGCATGCAT 59.855 47.619 25.64 7.59 0.00 3.96
612 653 0.549469 AGATGAGATGGGTGCATGCA 59.451 50.000 18.46 18.46 0.00 3.96
613 654 1.236628 GAGATGAGATGGGTGCATGC 58.763 55.000 11.82 11.82 0.00 4.06
614 655 2.219458 GTGAGATGAGATGGGTGCATG 58.781 52.381 0.00 0.00 0.00 4.06
696 745 2.680805 GCTTCTCAATGGACGATGGGAA 60.681 50.000 0.00 0.00 34.93 3.97
703 752 0.994995 CGACAGCTTCTCAATGGACG 59.005 55.000 0.00 0.00 0.00 4.79
732 781 3.087781 GGCCAAGCTTTCATTTCTCTCT 58.912 45.455 0.00 0.00 0.00 3.10
742 795 4.500265 TGGTCTGGCCAAGCTTTC 57.500 55.556 7.01 0.00 45.94 2.62
765 818 1.137675 GGATGTGGTTACGGGGTAGAC 59.862 57.143 0.00 0.00 0.00 2.59
769 822 0.917333 ATGGGATGTGGTTACGGGGT 60.917 55.000 0.00 0.00 0.00 4.95
770 823 1.133363 TATGGGATGTGGTTACGGGG 58.867 55.000 0.00 0.00 0.00 5.73
794 847 1.742880 CCATCTCCATATGGCCGCG 60.743 63.158 17.58 0.00 40.07 6.46
809 862 3.112205 GCGATGGGTGCTCCTCCAT 62.112 63.158 4.53 0.43 45.57 3.41
810 863 3.785859 GCGATGGGTGCTCCTCCA 61.786 66.667 4.53 0.00 37.46 3.86
811 864 3.474570 AGCGATGGGTGCTCCTCC 61.475 66.667 4.53 0.00 38.62 4.30
881 962 2.443390 GCGGGCTAGGTAGGTGGA 60.443 66.667 0.00 0.00 0.00 4.02
883 964 3.912907 CCGCGGGCTAGGTAGGTG 61.913 72.222 20.10 0.00 0.00 4.00
897 978 4.436998 ACACGACTAGCTGGCCGC 62.437 66.667 5.55 11.02 39.57 6.53
899 980 1.153745 CTGACACGACTAGCTGGCC 60.154 63.158 0.00 0.00 0.00 5.36
938 1019 4.860881 TAGGAGGAGGGCTGGCCG 62.861 72.222 15.17 0.00 36.85 6.13
939 1020 2.846754 CTAGGAGGAGGGCTGGCC 60.847 72.222 13.15 13.15 0.00 5.36
940 1021 3.555324 GCTAGGAGGAGGGCTGGC 61.555 72.222 0.00 0.00 0.00 4.85
941 1022 2.846754 GGCTAGGAGGAGGGCTGG 60.847 72.222 0.00 0.00 0.00 4.85
942 1023 3.230245 CGGCTAGGAGGAGGGCTG 61.230 72.222 0.00 0.00 0.00 4.85
944 1025 3.811807 TAGCGGCTAGGAGGAGGGC 62.812 68.421 5.42 0.00 0.00 5.19
945 1026 1.605165 CTAGCGGCTAGGAGGAGGG 60.605 68.421 25.85 1.95 31.03 4.30
946 1027 0.039035 ATCTAGCGGCTAGGAGGAGG 59.961 60.000 30.82 10.01 35.03 4.30
947 1028 1.459450 GATCTAGCGGCTAGGAGGAG 58.541 60.000 30.82 12.37 35.03 3.69
948 1029 0.038455 GGATCTAGCGGCTAGGAGGA 59.962 60.000 30.82 16.28 35.03 3.71
949 1030 0.251386 TGGATCTAGCGGCTAGGAGG 60.251 60.000 30.82 11.70 35.03 4.30
950 1031 1.173043 CTGGATCTAGCGGCTAGGAG 58.827 60.000 30.82 19.33 35.03 3.69
951 1032 0.896019 GCTGGATCTAGCGGCTAGGA 60.896 60.000 30.82 20.06 35.03 2.94
1152 1248 4.457496 ACGGTCATGGCCAGCGAG 62.457 66.667 18.31 1.38 38.14 5.03
1382 1496 4.045104 CACTAGGCAGTAATAAGCACTCG 58.955 47.826 0.00 0.00 32.21 4.18
1386 1500 5.414789 TGAACACTAGGCAGTAATAAGCA 57.585 39.130 0.00 0.00 32.21 3.91
1387 1501 6.927294 AATGAACACTAGGCAGTAATAAGC 57.073 37.500 0.00 0.00 32.21 3.09
1388 1502 8.421784 TCCTAATGAACACTAGGCAGTAATAAG 58.578 37.037 4.69 0.00 35.57 1.73
1389 1503 8.313944 TCCTAATGAACACTAGGCAGTAATAA 57.686 34.615 4.69 0.00 35.57 1.40
1390 1504 7.907841 TCCTAATGAACACTAGGCAGTAATA 57.092 36.000 4.69 0.00 35.57 0.98
1391 1505 6.808321 TCCTAATGAACACTAGGCAGTAAT 57.192 37.500 4.69 0.00 35.57 1.89
1392 1506 6.614694 TTCCTAATGAACACTAGGCAGTAA 57.385 37.500 4.69 0.00 35.57 2.24
1394 1508 5.499004 TTTCCTAATGAACACTAGGCAGT 57.501 39.130 4.69 0.00 35.57 4.40
1397 1511 6.759497 ACATTTTCCTAATGAACACTAGGC 57.241 37.500 4.69 0.00 35.57 3.93
1401 1515 6.293955 CGGTCAACATTTTCCTAATGAACACT 60.294 38.462 4.64 0.00 31.05 3.55
1405 1533 4.082463 GCCGGTCAACATTTTCCTAATGAA 60.082 41.667 1.90 0.00 0.00 2.57
1612 1792 1.271934 TGGGTGGATTGATTGCGTTTG 59.728 47.619 0.00 0.00 0.00 2.93
1615 1795 1.392589 GATGGGTGGATTGATTGCGT 58.607 50.000 0.00 0.00 0.00 5.24
1616 1796 0.670162 GGATGGGTGGATTGATTGCG 59.330 55.000 0.00 0.00 0.00 4.85
1658 1841 3.679025 TGAATTATTGCGGCTTTTTGCAG 59.321 39.130 0.00 0.00 42.89 4.41
1659 1842 3.431572 GTGAATTATTGCGGCTTTTTGCA 59.568 39.130 0.00 0.00 45.15 4.08
1660 1843 3.431572 TGTGAATTATTGCGGCTTTTTGC 59.568 39.130 0.00 0.00 41.94 3.68
1662 1845 8.491331 AATAATGTGAATTATTGCGGCTTTTT 57.509 26.923 0.00 0.00 35.91 1.94
1733 2213 1.351153 GGAGAAAACGAAGGAGCGAG 58.649 55.000 0.00 0.00 34.83 5.03
1743 2223 1.004918 AGACAGGGCGGAGAAAACG 60.005 57.895 0.00 0.00 0.00 3.60
1861 2404 3.202706 GATCGAAACGCCAGGCCC 61.203 66.667 5.63 0.00 0.00 5.80
1896 2449 8.925233 TGGTGGTCCAAGTTGCAAACAAAAAT 62.925 38.462 0.00 0.00 43.95 1.82
1897 2450 7.715788 TGGTGGTCCAAGTTGCAAACAAAAA 62.716 40.000 0.00 0.00 43.95 1.94
1917 2470 1.068125 CATGTCATGTGGCAACTGGTG 60.068 52.381 4.53 0.00 31.21 4.17
1940 2495 0.179045 ATCTGCACTTATCACGGCCC 60.179 55.000 0.00 0.00 0.00 5.80
1995 2551 3.005539 TCACTGGCTGCCTCTCCC 61.006 66.667 21.03 0.00 0.00 4.30
1996 2552 2.583520 CTCACTGGCTGCCTCTCC 59.416 66.667 21.03 0.00 0.00 3.71
2028 2591 3.177920 GCAGAGCACGCTCGTCAG 61.178 66.667 13.12 6.46 46.90 3.51
2029 2592 4.724602 GGCAGAGCACGCTCGTCA 62.725 66.667 13.12 0.00 46.90 4.35
2036 2599 4.880537 CTAGGCCGGCAGAGCACG 62.881 72.222 30.85 4.68 0.00 5.34
2037 2600 1.464376 TATCTAGGCCGGCAGAGCAC 61.464 60.000 30.85 9.73 0.00 4.40
2039 2602 0.393077 TTTATCTAGGCCGGCAGAGC 59.607 55.000 30.85 11.04 0.00 4.09
2040 2603 2.103263 AGTTTTATCTAGGCCGGCAGAG 59.897 50.000 30.85 23.79 0.00 3.35
2042 2605 2.622064 AGTTTTATCTAGGCCGGCAG 57.378 50.000 30.85 18.72 0.00 4.85
2043 2606 2.367567 CCTAGTTTTATCTAGGCCGGCA 59.632 50.000 30.85 7.96 46.71 5.69
2044 2607 3.041508 CCTAGTTTTATCTAGGCCGGC 57.958 52.381 21.18 21.18 46.71 6.13
2052 2615 7.292827 GGGAATAGTTCTCCCCTAGTTTTATCT 59.707 40.741 0.00 0.00 46.18 1.98
2053 2616 7.451732 GGGAATAGTTCTCCCCTAGTTTTATC 58.548 42.308 0.00 0.00 46.18 1.75
2065 2628 2.528041 AATCGCGGGAATAGTTCTCC 57.472 50.000 6.13 0.00 0.00 3.71
2068 2631 2.835027 AGGAAATCGCGGGAATAGTTC 58.165 47.619 6.13 7.97 0.00 3.01
2087 2650 4.566360 AGAACATGTGTTTTTCGCCAAAAG 59.434 37.500 0.00 0.00 38.56 2.27
2127 2690 3.244561 CCACAGAAAGAAAGGAGCTACCA 60.245 47.826 0.00 0.00 42.04 3.25
2128 2691 3.008049 TCCACAGAAAGAAAGGAGCTACC 59.992 47.826 0.00 0.00 39.35 3.18
2140 2718 2.555199 GGGTGATCGATCCACAGAAAG 58.445 52.381 22.31 0.00 36.31 2.62
2157 2735 2.064581 GCAGGAGTCGGTATGGGGT 61.065 63.158 0.00 0.00 0.00 4.95
2169 2747 1.357258 GCGATGTCTGTGTGCAGGAG 61.357 60.000 0.00 0.00 42.78 3.69
2259 3081 1.740380 CGGGATTCTCTTCACGCATGT 60.740 52.381 0.00 0.00 35.48 3.21
2286 3108 0.248907 CGGCTTCGGCTTTAGATCGA 60.249 55.000 0.00 0.00 41.44 3.59
2287 3109 2.217112 CGGCTTCGGCTTTAGATCG 58.783 57.895 0.00 0.00 41.44 3.69
2332 3154 2.997897 GAGCCAGGGAGACGGTGT 60.998 66.667 0.00 0.00 0.00 4.16
2367 3189 3.052082 CGAGTGGCCAAGCAGGTG 61.052 66.667 7.24 0.00 40.61 4.00
2371 3193 4.680237 CGACCGAGTGGCCAAGCA 62.680 66.667 7.24 0.00 39.70 3.91
2407 3229 3.435566 CCGAGTAGTGAGTACGTACGTA 58.564 50.000 23.60 23.60 36.66 3.57
2408 3230 2.263077 CCGAGTAGTGAGTACGTACGT 58.737 52.381 25.98 25.98 36.66 3.57
2409 3231 1.005557 GCCGAGTAGTGAGTACGTACG 60.006 57.143 19.49 15.01 36.66 3.67
2447 3276 2.749621 AGCGGAAGTAAATGGCAAAGAG 59.250 45.455 0.00 0.00 0.00 2.85
2459 3305 6.516718 AGAGTTACTACGTATAGCGGAAGTA 58.483 40.000 0.00 0.00 46.52 2.24
2472 3318 4.451557 CCGCAAACAAAAGAGTTACTACG 58.548 43.478 0.00 0.00 0.00 3.51
2480 3326 2.490328 TTCTGCCGCAAACAAAAGAG 57.510 45.000 0.00 0.00 0.00 2.85
2482 3328 4.150451 CCTAAATTCTGCCGCAAACAAAAG 59.850 41.667 0.00 0.00 0.00 2.27
2508 3354 9.939802 GAGGAAGTACTACTTGAGGAATAAAAA 57.060 33.333 6.17 0.00 38.80 1.94
2530 3376 4.646040 TGATAAGTAATTCCGAACGGAGGA 59.354 41.667 15.34 3.20 46.06 3.71
2531 3377 4.743644 GTGATAAGTAATTCCGAACGGAGG 59.256 45.833 15.34 0.00 46.06 4.30
2532 3378 5.345702 TGTGATAAGTAATTCCGAACGGAG 58.654 41.667 15.34 0.00 46.06 4.63
2534 3380 6.411630 TTTGTGATAAGTAATTCCGAACGG 57.588 37.500 6.94 6.94 0.00 4.44
2535 3381 8.889849 ATTTTTGTGATAAGTAATTCCGAACG 57.110 30.769 0.00 0.00 0.00 3.95
2580 3426 9.613957 CGAAGAAATGAACGTATCTAGATGTAT 57.386 33.333 15.79 0.00 0.00 2.29
2581 3427 8.833493 TCGAAGAAATGAACGTATCTAGATGTA 58.167 33.333 15.79 0.00 0.00 2.29
2582 3428 7.644551 GTCGAAGAAATGAACGTATCTAGATGT 59.355 37.037 15.79 2.60 39.69 3.06
2583 3429 7.644157 TGTCGAAGAAATGAACGTATCTAGATG 59.356 37.037 15.79 1.92 39.69 2.90
2584 3430 7.704271 TGTCGAAGAAATGAACGTATCTAGAT 58.296 34.615 10.73 10.73 39.69 1.98
2585 3431 7.080353 TGTCGAAGAAATGAACGTATCTAGA 57.920 36.000 0.00 0.00 39.69 2.43
2586 3432 7.736031 TTGTCGAAGAAATGAACGTATCTAG 57.264 36.000 0.00 0.00 39.69 2.43
2587 3433 8.697846 ATTTGTCGAAGAAATGAACGTATCTA 57.302 30.769 3.46 0.00 39.69 1.98
2588 3434 7.596749 ATTTGTCGAAGAAATGAACGTATCT 57.403 32.000 3.46 0.00 39.69 1.98
2589 3435 9.916397 ATTATTTGTCGAAGAAATGAACGTATC 57.084 29.630 11.99 0.00 39.69 2.24
2591 3437 9.749490 GAATTATTTGTCGAAGAAATGAACGTA 57.251 29.630 11.99 0.00 39.69 3.57
2592 3438 7.749126 GGAATTATTTGTCGAAGAAATGAACGT 59.251 33.333 11.99 0.00 39.69 3.99
2593 3439 7.045612 CGGAATTATTTGTCGAAGAAATGAACG 60.046 37.037 11.99 7.99 39.69 3.95
2594 3440 7.960738 TCGGAATTATTTGTCGAAGAAATGAAC 59.039 33.333 11.99 5.20 39.69 3.18
2595 3441 8.035165 TCGGAATTATTTGTCGAAGAAATGAA 57.965 30.769 11.99 5.38 39.69 2.57
2596 3442 7.603963 TCGGAATTATTTGTCGAAGAAATGA 57.396 32.000 11.99 6.15 39.69 2.57
2597 3443 7.045612 CGTTCGGAATTATTTGTCGAAGAAATG 60.046 37.037 11.99 0.00 39.69 2.32
2598 3444 6.959311 CGTTCGGAATTATTTGTCGAAGAAAT 59.041 34.615 8.33 8.33 39.69 2.17
2599 3445 6.301108 CGTTCGGAATTATTTGTCGAAGAAA 58.699 36.000 10.21 0.00 39.69 2.52
2600 3446 5.163933 CCGTTCGGAATTATTTGTCGAAGAA 60.164 40.000 5.19 0.00 39.69 2.52
2601 3447 4.327898 CCGTTCGGAATTATTTGTCGAAGA 59.672 41.667 5.19 0.00 39.89 2.87
2602 3448 4.327898 TCCGTTCGGAATTATTTGTCGAAG 59.672 41.667 11.66 6.68 39.89 3.79
2603 3449 4.244066 TCCGTTCGGAATTATTTGTCGAA 58.756 39.130 11.66 7.30 37.48 3.71
2604 3450 3.847542 TCCGTTCGGAATTATTTGTCGA 58.152 40.909 11.66 0.00 0.00 4.20
2605 3451 3.000925 CCTCCGTTCGGAATTATTTGTCG 59.999 47.826 14.79 0.00 33.41 4.35
2606 3452 3.311596 CCCTCCGTTCGGAATTATTTGTC 59.688 47.826 14.79 0.00 33.41 3.18
2607 3453 3.054948 TCCCTCCGTTCGGAATTATTTGT 60.055 43.478 14.79 0.00 33.41 2.83
2608 3454 3.537580 TCCCTCCGTTCGGAATTATTTG 58.462 45.455 14.79 1.97 33.41 2.32
2609 3455 3.199289 ACTCCCTCCGTTCGGAATTATTT 59.801 43.478 14.79 0.00 33.41 1.40
2610 3456 2.770232 ACTCCCTCCGTTCGGAATTATT 59.230 45.455 14.79 0.00 33.41 1.40
2611 3457 2.395619 ACTCCCTCCGTTCGGAATTAT 58.604 47.619 14.79 0.00 33.41 1.28
2612 3458 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
2613 3459 1.479730 GTACTCCCTCCGTTCGGAATT 59.520 52.381 14.79 0.00 33.41 2.17
2614 3460 1.109609 GTACTCCCTCCGTTCGGAAT 58.890 55.000 14.79 2.09 33.41 3.01
2615 3461 0.038744 AGTACTCCCTCCGTTCGGAA 59.961 55.000 14.79 0.04 33.41 4.30
2616 3462 0.911769 TAGTACTCCCTCCGTTCGGA 59.088 55.000 13.34 13.34 0.00 4.55
2617 3463 1.978454 ATAGTACTCCCTCCGTTCGG 58.022 55.000 0.00 4.74 0.00 4.30
2618 3464 7.495901 TCTATATATAGTACTCCCTCCGTTCG 58.504 42.308 17.44 0.00 0.00 3.95
2619 3465 7.442062 GCTCTATATATAGTACTCCCTCCGTTC 59.558 44.444 17.44 0.00 0.00 3.95
2620 3466 7.092533 TGCTCTATATATAGTACTCCCTCCGTT 60.093 40.741 17.44 0.00 0.00 4.44
2621 3467 6.386342 TGCTCTATATATAGTACTCCCTCCGT 59.614 42.308 17.44 0.00 0.00 4.69
2622 3468 6.828788 TGCTCTATATATAGTACTCCCTCCG 58.171 44.000 17.44 0.00 0.00 4.63
2623 3469 7.147266 ACCTGCTCTATATATAGTACTCCCTCC 60.147 44.444 17.44 1.16 0.00 4.30
2624 3470 7.808218 ACCTGCTCTATATATAGTACTCCCTC 58.192 42.308 17.44 2.97 0.00 4.30
2625 3471 7.774694 ACCTGCTCTATATATAGTACTCCCT 57.225 40.000 17.44 0.00 0.00 4.20
2626 3472 9.917887 TTAACCTGCTCTATATATAGTACTCCC 57.082 37.037 17.44 4.27 0.00 4.30
2630 3476 9.968870 GCCATTAACCTGCTCTATATATAGTAC 57.031 37.037 17.44 11.96 0.00 2.73
2631 3477 9.144298 GGCCATTAACCTGCTCTATATATAGTA 57.856 37.037 17.44 5.89 0.00 1.82
2632 3478 7.846823 AGGCCATTAACCTGCTCTATATATAGT 59.153 37.037 17.44 1.72 35.72 2.12
2633 3479 8.256356 AGGCCATTAACCTGCTCTATATATAG 57.744 38.462 12.84 12.84 35.72 1.31
2669 3516 6.441093 AAGAATATAATATGCGTGCCATGG 57.559 37.500 7.63 7.63 35.34 3.66
2674 3531 6.032460 GCCGAAAAAGAATATAATATGCGTGC 59.968 38.462 0.00 0.00 0.00 5.34
2678 3535 9.793252 ATCATGCCGAAAAAGAATATAATATGC 57.207 29.630 0.00 0.00 0.00 3.14
2746 3604 4.969196 CGACGGCATGATCGGGGG 62.969 72.222 12.30 0.00 34.67 5.40
2772 3630 3.504375 AGTTATAGGTGGATCGGGGTAC 58.496 50.000 0.00 0.00 0.00 3.34
2774 3632 2.789323 AGTTATAGGTGGATCGGGGT 57.211 50.000 0.00 0.00 0.00 4.95
2814 3689 3.704231 ATCGCTCACATGGCCACCC 62.704 63.158 8.16 0.00 0.00 4.61
2861 3742 1.056660 CACCTAACCTGACCCACTGT 58.943 55.000 0.00 0.00 0.00 3.55
2862 3743 0.324943 CCACCTAACCTGACCCACTG 59.675 60.000 0.00 0.00 0.00 3.66
2863 3744 1.489560 GCCACCTAACCTGACCCACT 61.490 60.000 0.00 0.00 0.00 4.00
2866 3748 2.675371 GGCCACCTAACCTGACCC 59.325 66.667 0.00 0.00 0.00 4.46
2870 3752 2.267961 GTCCGGCCACCTAACCTG 59.732 66.667 2.24 0.00 0.00 4.00
2911 3793 3.241701 CAAATTTGGATCCGGTGTTTCG 58.758 45.455 10.49 0.00 0.00 3.46
2946 4106 0.321564 CAACCAATCGAGGTGCTCCA 60.322 55.000 7.70 0.00 42.25 3.86
2967 4132 1.568504 CTGGCTGACCCTACCACTTA 58.431 55.000 0.00 0.00 33.59 2.24
3010 4455 1.071814 GCCAGTTACCGGGACAACA 59.928 57.895 6.32 0.00 0.00 3.33
3011 4456 1.673337 GGCCAGTTACCGGGACAAC 60.673 63.158 6.32 7.09 33.45 3.32
3012 4457 1.833787 GAGGCCAGTTACCGGGACAA 61.834 60.000 6.32 0.00 36.19 3.18
3016 4461 1.686110 AGAGAGGCCAGTTACCGGG 60.686 63.158 6.32 0.00 0.00 5.73
3019 4464 0.537653 GACCAGAGAGGCCAGTTACC 59.462 60.000 5.01 0.00 43.14 2.85
3020 4465 1.205893 CTGACCAGAGAGGCCAGTTAC 59.794 57.143 5.01 0.00 42.46 2.50
3022 4467 1.197430 CCTGACCAGAGAGGCCAGTT 61.197 60.000 5.01 0.00 45.66 3.16
3067 5246 8.834733 TCTACTTTTTCTACTACTAGAGAGGGT 58.165 37.037 0.00 0.00 30.31 4.34
3076 5255 9.984190 CTCACCTTTTCTACTTTTTCTACTACT 57.016 33.333 0.00 0.00 0.00 2.57
3079 5258 8.925338 TCTCTCACCTTTTCTACTTTTTCTACT 58.075 33.333 0.00 0.00 0.00 2.57
3081 5260 8.925338 AGTCTCTCACCTTTTCTACTTTTTCTA 58.075 33.333 0.00 0.00 0.00 2.10
3129 5359 0.638746 CGCCGTCAAACGATGAGTAC 59.361 55.000 0.24 0.00 46.05 2.73
3164 5585 3.835790 TACCAAGCCCACGTGCCAC 62.836 63.158 10.91 0.86 0.00 5.01
3165 5586 3.545124 CTACCAAGCCCACGTGCCA 62.545 63.158 10.91 0.00 0.00 4.92
3166 5587 2.746277 CTACCAAGCCCACGTGCC 60.746 66.667 10.91 2.91 0.00 5.01
3251 5696 4.494690 CGCACACATTATCACCACATCTTC 60.495 45.833 0.00 0.00 0.00 2.87
3254 5699 2.935849 TCGCACACATTATCACCACATC 59.064 45.455 0.00 0.00 0.00 3.06
3275 5720 3.528370 CGGGCTAGCAGGCTACGT 61.528 66.667 18.24 0.00 41.09 3.57
3282 5727 2.527951 AAACAGGAGCGGGCTAGCAG 62.528 60.000 18.24 11.07 40.15 4.24
3283 5728 2.124507 AAAACAGGAGCGGGCTAGCA 62.125 55.000 18.24 0.00 40.15 3.49
3285 5730 0.321653 ACAAAACAGGAGCGGGCTAG 60.322 55.000 0.00 0.00 0.00 3.42
3286 5731 0.109723 AACAAAACAGGAGCGGGCTA 59.890 50.000 0.00 0.00 0.00 3.93
3287 5732 1.152756 AACAAAACAGGAGCGGGCT 60.153 52.632 0.00 0.00 0.00 5.19
3290 5752 1.370414 CGCAACAAAACAGGAGCGG 60.370 57.895 0.00 0.00 41.30 5.52
3292 5754 1.587946 CAAACGCAACAAAACAGGAGC 59.412 47.619 0.00 0.00 0.00 4.70
3375 5846 4.347453 GCACCAAAGGCAGCGTGG 62.347 66.667 6.81 6.81 38.46 4.94
3382 5853 0.753111 CCCTAGATGGCACCAAAGGC 60.753 60.000 9.51 0.00 0.00 4.35
3418 5889 0.519792 GTTCGTTTCGCGGGTTATGC 60.520 55.000 6.13 0.00 41.72 3.14
3419 5890 0.791422 TGTTCGTTTCGCGGGTTATG 59.209 50.000 6.13 0.00 41.72 1.90
3420 5891 1.510776 TTGTTCGTTTCGCGGGTTAT 58.489 45.000 6.13 0.00 41.72 1.89
3421 5892 1.293924 TTTGTTCGTTTCGCGGGTTA 58.706 45.000 6.13 0.00 41.72 2.85
3422 5893 0.664224 ATTTGTTCGTTTCGCGGGTT 59.336 45.000 6.13 0.00 41.72 4.11
3423 5894 0.664224 AATTTGTTCGTTTCGCGGGT 59.336 45.000 6.13 0.00 41.72 5.28
3424 5895 2.096119 ACTAATTTGTTCGTTTCGCGGG 60.096 45.455 6.13 0.00 41.72 6.13
3425 5896 3.177605 ACTAATTTGTTCGTTTCGCGG 57.822 42.857 6.13 0.00 41.72 6.46
3426 5897 4.084718 GTGAACTAATTTGTTCGTTTCGCG 59.915 41.667 22.08 0.00 46.59 5.87
3427 5898 4.965158 TGTGAACTAATTTGTTCGTTTCGC 59.035 37.500 22.08 10.43 46.59 4.70
3428 5899 6.685403 AGTTGTGAACTAATTTGTTCGTTTCG 59.315 34.615 22.08 0.00 46.59 3.46
3429 5900 7.513041 GCAGTTGTGAACTAATTTGTTCGTTTC 60.513 37.037 22.08 14.68 46.59 2.78
3430 5901 6.252655 GCAGTTGTGAACTAATTTGTTCGTTT 59.747 34.615 22.08 8.13 46.59 3.60
3431 5902 5.741982 GCAGTTGTGAACTAATTTGTTCGTT 59.258 36.000 22.08 7.85 46.59 3.85
3432 5903 5.270853 GCAGTTGTGAACTAATTTGTTCGT 58.729 37.500 22.08 6.84 46.59 3.85
3433 5904 4.675114 GGCAGTTGTGAACTAATTTGTTCG 59.325 41.667 22.08 11.51 46.59 3.95
3434 5905 5.587289 TGGCAGTTGTGAACTAATTTGTTC 58.413 37.500 21.25 21.25 44.60 3.18
3435 5906 5.590530 TGGCAGTTGTGAACTAATTTGTT 57.409 34.783 4.91 4.91 40.46 2.83
3436 5907 5.562696 CGATGGCAGTTGTGAACTAATTTGT 60.563 40.000 0.00 0.00 40.46 2.83
3437 5908 4.853196 CGATGGCAGTTGTGAACTAATTTG 59.147 41.667 0.00 0.00 40.46 2.32
3438 5909 4.615912 GCGATGGCAGTTGTGAACTAATTT 60.616 41.667 0.00 0.00 40.46 1.82
3439 5910 3.119849 GCGATGGCAGTTGTGAACTAATT 60.120 43.478 0.00 0.00 40.46 1.40
3440 5911 2.420022 GCGATGGCAGTTGTGAACTAAT 59.580 45.455 0.00 0.00 40.46 1.73
3441 5912 1.804151 GCGATGGCAGTTGTGAACTAA 59.196 47.619 0.00 0.00 40.46 2.24
3442 5913 1.438651 GCGATGGCAGTTGTGAACTA 58.561 50.000 0.00 0.00 40.46 2.24
3443 5914 1.237285 GGCGATGGCAGTTGTGAACT 61.237 55.000 1.01 0.00 44.06 3.01
3444 5915 1.210155 GGCGATGGCAGTTGTGAAC 59.790 57.895 1.01 0.00 42.47 3.18
3445 5916 2.324330 CGGCGATGGCAGTTGTGAA 61.324 57.895 0.00 0.00 42.47 3.18
3446 5917 2.741985 CGGCGATGGCAGTTGTGA 60.742 61.111 0.00 0.00 42.47 3.58
3447 5918 2.741985 TCGGCGATGGCAGTTGTG 60.742 61.111 4.99 0.00 42.47 3.33
3448 5919 2.434884 CTCGGCGATGGCAGTTGT 60.435 61.111 11.27 0.00 42.47 3.32
3449 5920 3.869272 GCTCGGCGATGGCAGTTG 61.869 66.667 11.27 0.00 42.47 3.16
3450 5921 4.087892 AGCTCGGCGATGGCAGTT 62.088 61.111 20.93 0.36 42.47 3.16
3451 5922 4.827087 CAGCTCGGCGATGGCAGT 62.827 66.667 20.93 0.93 42.47 4.40
3482 5953 8.869897 CATGTACTATACCAAACACACACTAAG 58.130 37.037 0.00 0.00 0.00 2.18
3487 5958 6.361768 TCCATGTACTATACCAAACACACA 57.638 37.500 0.00 0.00 0.00 3.72
3500 5971 2.700371 CTCATGCACCCTCCATGTACTA 59.300 50.000 0.00 0.00 40.63 1.82
3501 5972 1.487976 CTCATGCACCCTCCATGTACT 59.512 52.381 0.00 0.00 40.63 2.73
3504 5975 1.077212 GCTCATGCACCCTCCATGT 60.077 57.895 0.00 0.00 40.63 3.21
3528 5999 9.634163 ACCGAAAAATAAATTGAGTATGAAACC 57.366 29.630 0.00 0.00 0.00 3.27
3534 6005 9.418045 CCAAACACCGAAAAATAAATTGAGTAT 57.582 29.630 0.00 0.00 0.00 2.12
3543 6014 4.828387 AGGCTACCAAACACCGAAAAATAA 59.172 37.500 0.00 0.00 0.00 1.40
3544 6015 4.216687 CAGGCTACCAAACACCGAAAAATA 59.783 41.667 0.00 0.00 0.00 1.40
3551 6022 1.599518 TGCAGGCTACCAAACACCG 60.600 57.895 0.00 0.00 0.00 4.94
3559 6030 2.202810 GAGCTCGTGCAGGCTACC 60.203 66.667 12.58 0.00 42.74 3.18
3562 6033 4.756458 GCTGAGCTCGTGCAGGCT 62.756 66.667 21.63 8.25 42.74 4.58
3565 6036 4.383861 TGGGCTGAGCTCGTGCAG 62.384 66.667 25.71 13.37 42.74 4.41
3566 6037 4.383861 CTGGGCTGAGCTCGTGCA 62.384 66.667 25.71 11.06 42.74 4.57
3567 6038 2.021068 TATCTGGGCTGAGCTCGTGC 62.021 60.000 19.33 19.33 40.05 5.34
3568 6039 0.249238 GTATCTGGGCTGAGCTCGTG 60.249 60.000 9.64 5.69 0.00 4.35
3569 6040 1.395826 GGTATCTGGGCTGAGCTCGT 61.396 60.000 9.64 0.00 0.00 4.18
3570 6041 1.365633 GGTATCTGGGCTGAGCTCG 59.634 63.158 9.64 5.21 0.00 5.03
3571 6042 0.762461 AGGGTATCTGGGCTGAGCTC 60.762 60.000 6.82 6.82 0.00 4.09
3572 6043 0.762461 GAGGGTATCTGGGCTGAGCT 60.762 60.000 3.72 0.00 0.00 4.09
3573 6044 1.751563 GAGGGTATCTGGGCTGAGC 59.248 63.158 0.00 0.00 0.00 4.26
3574 6045 0.757188 ACGAGGGTATCTGGGCTGAG 60.757 60.000 0.00 0.00 0.00 3.35
3575 6046 0.554305 TACGAGGGTATCTGGGCTGA 59.446 55.000 0.00 0.00 0.00 4.26
3576 6047 0.674534 GTACGAGGGTATCTGGGCTG 59.325 60.000 0.00 0.00 0.00 4.85
3583 6054 1.411246 TGTGCATGGTACGAGGGTATC 59.589 52.381 0.00 0.00 0.00 2.24
3588 6059 2.002586 CTCTTTGTGCATGGTACGAGG 58.997 52.381 0.00 0.00 0.00 4.63
3595 6066 2.225019 GTGTGTCTCTCTTTGTGCATGG 59.775 50.000 0.00 0.00 0.00 3.66
3612 6083 0.443869 GCGAACTATGCTGTGGTGTG 59.556 55.000 0.00 0.00 0.00 3.82
3625 6096 2.037136 GCATGCTGACAGGCGAACT 61.037 57.895 11.37 0.00 44.57 3.01
3632 6103 2.747822 GGCTCGTGCATGCTGACAG 61.748 63.158 20.33 10.34 41.91 3.51
3638 6109 0.097674 CTTACTTGGCTCGTGCATGC 59.902 55.000 11.82 11.82 41.91 4.06
3650 6121 1.126079 AACACGTCGTCGCTTACTTG 58.874 50.000 0.99 0.00 41.18 3.16
3729 6275 4.952071 TTTGGAATCCTGCACATTTCAA 57.048 36.364 0.00 3.96 28.45 2.69
3730 6276 4.952071 TTTTGGAATCCTGCACATTTCA 57.048 36.364 0.00 0.00 0.00 2.69
3931 6681 5.128171 TCGGTGGTACTATAGCAATCAGTTT 59.872 40.000 0.00 0.00 37.99 2.66
3952 6702 1.284657 GCATCTGTGAGACATGTCGG 58.715 55.000 19.85 9.28 34.09 4.79
3953 6703 2.000429 TGCATCTGTGAGACATGTCG 58.000 50.000 19.85 5.80 34.09 4.35
4001 6869 5.462729 CACTCAGCATGTATCAGATGAGAAC 59.537 44.000 13.74 0.00 38.02 3.01
4002 6870 5.128335 ACACTCAGCATGTATCAGATGAGAA 59.872 40.000 13.74 0.00 38.02 2.87
4004 6872 4.946445 ACACTCAGCATGTATCAGATGAG 58.054 43.478 6.18 6.18 39.96 2.90
4011 6879 6.810676 CCATATGTCTACACTCAGCATGTATC 59.189 42.308 1.24 0.00 37.40 2.24
4012 6880 6.695429 CCATATGTCTACACTCAGCATGTAT 58.305 40.000 1.24 0.00 37.40 2.29
4013 6881 5.509670 GCCATATGTCTACACTCAGCATGTA 60.510 44.000 1.24 0.00 37.40 2.29
4015 6883 3.744942 GCCATATGTCTACACTCAGCATG 59.255 47.826 1.24 0.00 37.54 4.06
4017 6885 2.103094 GGCCATATGTCTACACTCAGCA 59.897 50.000 0.00 0.00 0.00 4.41
4018 6886 2.760374 GGCCATATGTCTACACTCAGC 58.240 52.381 0.00 0.00 0.00 4.26
4019 6887 2.362397 ACGGCCATATGTCTACACTCAG 59.638 50.000 2.24 0.00 0.00 3.35
4020 6888 2.100749 CACGGCCATATGTCTACACTCA 59.899 50.000 2.24 0.00 0.00 3.41
4021 6889 2.100916 ACACGGCCATATGTCTACACTC 59.899 50.000 2.24 0.00 0.00 3.51
4022 6890 2.108168 ACACGGCCATATGTCTACACT 58.892 47.619 2.24 0.00 0.00 3.55
4023 6891 2.201732 CACACGGCCATATGTCTACAC 58.798 52.381 2.24 0.00 0.00 2.90
4024 6892 1.472552 GCACACGGCCATATGTCTACA 60.473 52.381 2.24 0.00 36.11 2.74
4027 6895 0.181114 ATGCACACGGCCATATGTCT 59.819 50.000 2.24 0.00 43.89 3.41
4028 6896 1.531149 GTATGCACACGGCCATATGTC 59.469 52.381 2.24 0.00 43.89 3.06
4050 7277 0.982852 ACCCCCGATCTCTGCATCAA 60.983 55.000 0.00 0.00 0.00 2.57
4125 7515 9.430838 CTCAATTAATCGCATTTTCTCTGTAAG 57.569 33.333 0.00 0.00 0.00 2.34
4193 7583 8.694171 AAGGGGAATTAATTAAAAGATGGGTT 57.306 30.769 1.21 0.00 0.00 4.11
4209 8062 6.273495 TGCCCAAATTTTAGTAAAGGGGAATT 59.727 34.615 19.70 6.02 36.14 2.17
4210 8063 5.788014 TGCCCAAATTTTAGTAAAGGGGAAT 59.212 36.000 19.70 1.01 36.14 3.01
4211 8064 5.155905 TGCCCAAATTTTAGTAAAGGGGAA 58.844 37.500 19.70 11.62 36.14 3.97
4212 8065 4.753186 TGCCCAAATTTTAGTAAAGGGGA 58.247 39.130 19.70 14.38 36.14 4.81
4217 8070 7.589958 TCAAGACTGCCCAAATTTTAGTAAA 57.410 32.000 0.00 0.00 0.00 2.01
4218 8071 7.430441 GTTCAAGACTGCCCAAATTTTAGTAA 58.570 34.615 0.00 0.00 0.00 2.24
4253 8119 2.390599 GGAAACGCTCGCTCATGCA 61.391 57.895 0.00 0.00 39.64 3.96
4261 8127 3.020026 CTGCAGCAGGAAACGCTCG 62.020 63.158 15.35 0.00 37.95 5.03
4265 8131 0.947244 AAACTCTGCAGCAGGAAACG 59.053 50.000 22.62 8.48 31.51 3.60
4332 8213 5.420104 CCTGGTAGAAATGGAGCAGAAAATT 59.580 40.000 2.80 0.00 0.00 1.82
4565 8446 3.124921 GCGATGTCGGGGTTGTGG 61.125 66.667 4.44 0.00 40.23 4.17
4618 8499 2.745100 CGAGGAGTGACGGACGGA 60.745 66.667 0.00 0.00 0.00 4.69
4628 8509 0.753262 AAACAGAGTGCACGAGGAGT 59.247 50.000 12.01 4.46 0.00 3.85
4629 8510 1.143305 CAAACAGAGTGCACGAGGAG 58.857 55.000 12.01 3.80 0.00 3.69
4630 8511 0.464036 ACAAACAGAGTGCACGAGGA 59.536 50.000 12.01 0.00 0.00 3.71
4631 8512 1.003545 CAACAAACAGAGTGCACGAGG 60.004 52.381 12.01 7.16 0.00 4.63
4658 8539 0.029834 GAACAGTGTGCTTGTGCCTG 59.970 55.000 0.00 0.00 38.71 4.85
4661 8542 1.016627 TCAGAACAGTGTGCTTGTGC 58.983 50.000 0.00 0.00 40.20 4.57
4662 8543 3.763097 TTTCAGAACAGTGTGCTTGTG 57.237 42.857 0.00 0.00 0.00 3.33
4681 8562 8.800332 ACAGCACAAAGAGATTCAGATATTTTT 58.200 29.630 0.00 0.00 0.00 1.94
4692 8573 5.577945 CACAACAAAACAGCACAAAGAGATT 59.422 36.000 0.00 0.00 0.00 2.40
4703 8584 4.173256 AGTTAACTGCACAACAAAACAGC 58.827 39.130 7.48 0.00 33.35 4.40
4730 8611 2.091112 CCTCGTCAGCAAGCACTCG 61.091 63.158 0.00 0.00 0.00 4.18
4836 8717 7.115520 GTCTATATGATGATGAAACCGAGTGTG 59.884 40.741 0.00 0.00 0.00 3.82
4857 8738 3.920231 TGGATGCTTGAAGCTGTCTAT 57.080 42.857 18.94 2.47 42.97 1.98
4862 8743 3.770666 CTCATTTGGATGCTTGAAGCTG 58.229 45.455 18.94 6.37 42.97 4.24
4917 9004 2.506472 GGCGGTCCCTGGAAGATC 59.494 66.667 0.00 0.00 34.07 2.75
5027 9114 0.535102 ACACGAACTTCCAGCCCTTG 60.535 55.000 0.00 0.00 0.00 3.61
5075 9163 8.672815 AGAAGCAAGTAAATAGAAGAGCATTTC 58.327 33.333 0.00 0.00 0.00 2.17
5076 9165 8.572855 AGAAGCAAGTAAATAGAAGAGCATTT 57.427 30.769 0.00 0.00 0.00 2.32
5086 9175 8.031864 TCTGACAGAGAAGAAGCAAGTAAATAG 58.968 37.037 0.00 0.00 0.00 1.73
5102 9195 7.496920 CCATGCTTACATTATTTCTGACAGAGA 59.503 37.037 5.10 1.11 32.87 3.10
5103 9196 7.496920 TCCATGCTTACATTATTTCTGACAGAG 59.503 37.037 5.10 0.00 32.87 3.35
5104 9197 7.337938 TCCATGCTTACATTATTTCTGACAGA 58.662 34.615 0.00 0.00 32.87 3.41
5119 9212 3.449737 TGGGTACTGTACTCCATGCTTAC 59.550 47.826 14.91 0.00 0.00 2.34
5120 9213 3.715287 TGGGTACTGTACTCCATGCTTA 58.285 45.455 14.91 0.00 0.00 3.09
5122 9215 2.247699 TGGGTACTGTACTCCATGCT 57.752 50.000 14.91 0.00 0.00 3.79
5123 9216 2.434336 TGATGGGTACTGTACTCCATGC 59.566 50.000 29.45 23.06 38.78 4.06
5124 9217 4.344968 TCATGATGGGTACTGTACTCCATG 59.655 45.833 29.45 25.54 38.78 3.66
5125 9218 4.556697 TCATGATGGGTACTGTACTCCAT 58.443 43.478 26.88 26.88 40.26 3.41
5126 9219 3.989056 TCATGATGGGTACTGTACTCCA 58.011 45.455 22.08 22.08 34.84 3.86
5127 9220 5.116882 GTTTCATGATGGGTACTGTACTCC 58.883 45.833 14.91 14.81 0.00 3.85
5128 9221 5.730550 TGTTTCATGATGGGTACTGTACTC 58.269 41.667 16.79 14.02 0.00 2.59
5129 9222 5.755409 TGTTTCATGATGGGTACTGTACT 57.245 39.130 16.79 0.00 0.00 2.73
5130 9223 6.349033 GGTTTGTTTCATGATGGGTACTGTAC 60.349 42.308 9.46 9.46 0.00 2.90
5131 9224 5.708230 GGTTTGTTTCATGATGGGTACTGTA 59.292 40.000 0.00 0.00 0.00 2.74
5132 9225 4.522789 GGTTTGTTTCATGATGGGTACTGT 59.477 41.667 0.00 0.00 0.00 3.55
5133 9226 4.766891 AGGTTTGTTTCATGATGGGTACTG 59.233 41.667 0.00 0.00 0.00 2.74
5134 9227 4.998051 AGGTTTGTTTCATGATGGGTACT 58.002 39.130 0.00 0.00 0.00 2.73
5135 9228 6.617879 GTTAGGTTTGTTTCATGATGGGTAC 58.382 40.000 0.00 0.00 0.00 3.34
5136 9229 5.413213 CGTTAGGTTTGTTTCATGATGGGTA 59.587 40.000 0.00 0.00 0.00 3.69
5145 9238 4.742438 GAGCATCGTTAGGTTTGTTTCA 57.258 40.909 0.00 0.00 0.00 2.69
5312 9408 4.665009 TGATGCATCCTCCCTTATTAGGTT 59.335 41.667 23.67 0.00 40.19 3.50
5329 9425 1.612950 GTGTCAATGGTTGGTGATGCA 59.387 47.619 0.00 0.00 0.00 3.96
5339 9435 2.886523 CAAGATGGTGTGTGTCAATGGT 59.113 45.455 0.00 0.00 0.00 3.55
5343 9439 3.376859 GTCAACAAGATGGTGTGTGTCAA 59.623 43.478 0.00 0.00 36.24 3.18
5443 9546 1.224069 CCGTATGGGCAGCGATCTTG 61.224 60.000 0.00 0.00 0.00 3.02
5613 11100 8.682936 AAGAGTACATGTCATTCTGAAAGTTT 57.317 30.769 0.00 0.00 33.76 2.66
5636 11123 6.038161 TCTGGTGTCAACTGAATGTAACAAAG 59.962 38.462 0.00 0.00 0.00 2.77
5770 11260 0.798776 CAACCCACTCATTGACTCGC 59.201 55.000 0.00 0.00 0.00 5.03
5803 11293 2.957402 TTGTCTTGTTGGCATCTCCT 57.043 45.000 0.00 0.00 35.26 3.69
5839 11329 5.907207 TCTATCACCTTCACAGCATCTAAC 58.093 41.667 0.00 0.00 0.00 2.34
5990 11490 6.308371 ACTTGAAAACACGAAAATCGGTAT 57.692 33.333 4.66 0.00 45.59 2.73
6010 11511 7.385752 CACATCAGGCATTATTTGACAAAACTT 59.614 33.333 4.41 0.00 34.87 2.66
6081 11582 8.451908 AGAAACCACTTATAATTATGCAGGTC 57.548 34.615 8.28 1.51 0.00 3.85
6097 11598 5.632347 CGTAGAACAAATCGTAGAAACCACT 59.368 40.000 0.00 0.00 43.58 4.00
6117 11618 4.309099 TGTAGTACCCTTTGTTTGCGTAG 58.691 43.478 0.00 0.00 0.00 3.51
6260 11761 3.437428 CCGTTTGTCATAACCATGCATG 58.563 45.455 20.19 20.19 31.73 4.06
6362 11872 7.108841 AGAGAATGAATGGTTGGATCAAATG 57.891 36.000 0.00 0.00 0.00 2.32
6379 11889 4.747108 CCTTGTCGGCAGTAATAGAGAATG 59.253 45.833 0.00 0.00 0.00 2.67
6424 11935 6.801539 ATACCGCATGTTATTAACTGATGG 57.198 37.500 7.99 10.28 0.00 3.51
6443 11954 9.056005 TGTCATGATGCTTCAGTAAATAATACC 57.944 33.333 8.40 0.00 34.73 2.73
6485 12006 6.597562 ACAACTTGTGTTATTCTTCCAGGTA 58.402 36.000 0.00 0.00 37.01 3.08
6600 12122 3.997681 CTGCTGCTGATCATCCTCTATTG 59.002 47.826 0.00 0.00 0.00 1.90
6662 12186 6.139435 CGTTGAGCAACAATGTAATGTACAA 58.861 36.000 13.17 0.00 40.57 2.41
6712 12242 5.675684 TGTTACTGCATTCTATGGTCTGA 57.324 39.130 0.00 0.00 0.00 3.27
6799 12329 7.799914 CGTCAAGTAAAAGGTTATACCACAAAC 59.200 37.037 0.00 0.00 41.95 2.93
6822 12352 0.899720 TAGTTCCATCCACCCACGTC 59.100 55.000 0.00 0.00 0.00 4.34
6844 12374 4.012374 CAAGTAGCAGTGGAAATGGATGT 58.988 43.478 0.00 0.00 28.90 3.06
6847 12377 3.788227 ACAAGTAGCAGTGGAAATGGA 57.212 42.857 0.00 0.00 28.90 3.41
6855 12385 5.140747 ACTTCTCCTTACAAGTAGCAGTG 57.859 43.478 0.00 0.00 30.80 3.66
6868 12398 4.042187 ACTTTGGCATCACTACTTCTCCTT 59.958 41.667 0.00 0.00 0.00 3.36
6900 12430 2.023741 GCGTCAATCGGCAGCATG 59.976 61.111 0.00 0.00 40.26 4.06
6901 12431 2.039974 TTGCGTCAATCGGCAGCAT 61.040 52.632 0.00 0.00 40.26 3.79
6902 12432 2.667874 TTGCGTCAATCGGCAGCA 60.668 55.556 0.00 0.00 40.26 4.41
6903 12433 2.202349 GTTGCGTCAATCGGCAGC 60.202 61.111 0.00 0.00 40.26 5.25
6904 12434 0.521867 CATGTTGCGTCAATCGGCAG 60.522 55.000 0.00 0.00 40.26 4.85
6905 12435 1.233950 ACATGTTGCGTCAATCGGCA 61.234 50.000 0.00 0.00 40.26 5.69
6906 12436 0.724549 TACATGTTGCGTCAATCGGC 59.275 50.000 2.30 0.00 40.26 5.54
6907 12437 2.351418 ACATACATGTTGCGTCAATCGG 59.649 45.455 2.30 0.00 37.90 4.18
6908 12438 3.061965 TGACATACATGTTGCGTCAATCG 59.938 43.478 17.39 0.00 41.95 3.34
6932 12462 5.368145 TCTATTTCCGATTGATTGTCCCAG 58.632 41.667 0.00 0.00 0.00 4.45
6935 12465 8.190784 ACAATTTCTATTTCCGATTGATTGTCC 58.809 33.333 0.00 0.00 31.69 4.02
6944 12474 8.454106 CAAGTCTCAACAATTTCTATTTCCGAT 58.546 33.333 0.00 0.00 0.00 4.18
6953 12483 6.261826 CCAAGTCTCAAGTCTCAACAATTTCT 59.738 38.462 0.00 0.00 0.00 2.52
6958 12488 3.206150 GCCAAGTCTCAAGTCTCAACAA 58.794 45.455 0.00 0.00 0.00 2.83
6970 12500 1.668419 ATATGCCGTTGCCAAGTCTC 58.332 50.000 0.00 0.00 36.33 3.36
6980 12510 6.151985 TGGAAGATTTGTTTGTATATGCCGTT 59.848 34.615 0.00 0.00 0.00 4.44
6999 12529 9.691362 GTGCTAACAGAAATTTATTTTGGAAGA 57.309 29.630 0.00 0.00 0.00 2.87
7000 12530 8.925700 GGTGCTAACAGAAATTTATTTTGGAAG 58.074 33.333 0.00 0.00 0.00 3.46
7025 12555 4.747540 TGTCGAAATGAACTTGTCATGG 57.252 40.909 0.00 0.00 46.80 3.66
7042 12572 4.481463 ACCACTTTGTTTTTGTCTTGTCG 58.519 39.130 0.00 0.00 0.00 4.35
7048 12578 3.855379 GGTCGAACCACTTTGTTTTTGTC 59.145 43.478 0.00 0.00 38.42 3.18
7051 12581 2.826725 TGGGTCGAACCACTTTGTTTTT 59.173 40.909 20.95 0.00 41.02 1.94
7082 12612 6.324512 TGTTTGCATGATATTAAGAGGCCAAT 59.675 34.615 5.01 0.00 0.00 3.16
7099 12630 5.467399 CACCAAAATCTTCACATGTTTGCAT 59.533 36.000 0.00 0.00 35.32 3.96
7104 12635 5.833131 AGTACCACCAAAATCTTCACATGTT 59.167 36.000 0.00 0.00 0.00 2.71
7106 12637 5.473162 TGAGTACCACCAAAATCTTCACATG 59.527 40.000 0.00 0.00 0.00 3.21
7124 12655 4.326548 GCCATGTACGTTTTCTCTGAGTAC 59.673 45.833 4.32 0.55 38.40 2.73
7127 12658 3.325870 TGCCATGTACGTTTTCTCTGAG 58.674 45.455 0.00 0.00 0.00 3.35
7129 12660 3.684305 TCATGCCATGTACGTTTTCTCTG 59.316 43.478 4.31 0.00 0.00 3.35
7130 12661 3.937814 TCATGCCATGTACGTTTTCTCT 58.062 40.909 4.31 0.00 0.00 3.10
7131 12662 4.882671 ATCATGCCATGTACGTTTTCTC 57.117 40.909 4.31 0.00 0.00 2.87
7134 12665 5.643379 AAGAATCATGCCATGTACGTTTT 57.357 34.783 4.31 0.00 0.00 2.43
7195 12728 2.081462 GTCCGTTTCCGTCCAAATGAT 58.919 47.619 0.00 0.00 0.00 2.45
7205 12738 2.094762 AAGAAGGATGTCCGTTTCCG 57.905 50.000 0.00 0.00 42.08 4.30


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.