Multiple sequence alignment - TraesCS3B01G556300
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS3B01G556300 | chr3B | 100.000 | 3035 | 0 | 0 | 1 | 3035 | 790372132 | 790369098 | 0.000000e+00 | 5605.0 |
1 | TraesCS3B01G556300 | chr3B | 81.379 | 145 | 23 | 3 | 2890 | 3033 | 789758273 | 789758132 | 6.880000e-22 | 115.0 |
2 | TraesCS3B01G556300 | chr3B | 97.059 | 34 | 1 | 0 | 67 | 100 | 17808100 | 17808133 | 1.180000e-04 | 58.4 |
3 | TraesCS3B01G556300 | chr3A | 88.323 | 2218 | 130 | 63 | 134 | 2309 | 720699166 | 720697036 | 0.000000e+00 | 2542.0 |
4 | TraesCS3B01G556300 | chr3A | 88.865 | 467 | 37 | 10 | 1774 | 2233 | 720693975 | 720693517 | 7.350000e-156 | 560.0 |
5 | TraesCS3B01G556300 | chr3A | 84.756 | 328 | 34 | 7 | 2708 | 3033 | 720694999 | 720694686 | 6.320000e-82 | 315.0 |
6 | TraesCS3B01G556300 | chr3A | 83.642 | 324 | 34 | 10 | 2712 | 3033 | 720633870 | 720633564 | 1.380000e-73 | 287.0 |
7 | TraesCS3B01G556300 | chr3A | 96.552 | 116 | 3 | 1 | 2335 | 2450 | 720696893 | 720696779 | 1.110000e-44 | 191.0 |
8 | TraesCS3B01G556300 | chr3A | 90.299 | 134 | 8 | 2 | 2322 | 2450 | 720693396 | 720693263 | 1.450000e-38 | 171.0 |
9 | TraesCS3B01G556300 | chr3A | 91.667 | 72 | 4 | 2 | 2471 | 2542 | 720696783 | 720696714 | 6.920000e-17 | 99.0 |
10 | TraesCS3B01G556300 | chr3A | 90.278 | 72 | 5 | 2 | 2471 | 2542 | 720693267 | 720693198 | 3.220000e-15 | 93.5 |
11 | TraesCS3B01G556300 | chr3D | 90.847 | 1912 | 107 | 44 | 658 | 2542 | 590440827 | 590438957 | 0.000000e+00 | 2499.0 |
12 | TraesCS3B01G556300 | chr3D | 82.731 | 498 | 41 | 23 | 134 | 608 | 590441399 | 590440924 | 4.710000e-108 | 401.0 |
13 | TraesCS3B01G556300 | chr4A | 85.841 | 113 | 13 | 2 | 8 | 117 | 635930046 | 635930158 | 1.910000e-22 | 117.0 |
14 | TraesCS3B01G556300 | chr4A | 100.000 | 34 | 0 | 0 | 67 | 100 | 715446633 | 715446600 | 2.530000e-06 | 63.9 |
15 | TraesCS3B01G556300 | chr1D | 82.727 | 110 | 14 | 4 | 1691 | 1800 | 104021191 | 104021295 | 3.220000e-15 | 93.5 |
16 | TraesCS3B01G556300 | chr5D | 81.609 | 87 | 13 | 2 | 17 | 100 | 371288948 | 371288862 | 5.430000e-08 | 69.4 |
17 | TraesCS3B01G556300 | chrUn | 79.167 | 96 | 17 | 2 | 8 | 100 | 345308843 | 345308938 | 2.530000e-06 | 63.9 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS3B01G556300 | chr3B | 790369098 | 790372132 | 3034 | True | 5605.000000 | 5605 | 100.000000 | 1 | 3035 | 1 | chr3B.!!$R2 | 3034 |
1 | TraesCS3B01G556300 | chr3A | 720693198 | 720699166 | 5968 | True | 567.357143 | 2542 | 90.105714 | 134 | 3033 | 7 | chr3A.!!$R2 | 2899 |
2 | TraesCS3B01G556300 | chr3D | 590438957 | 590441399 | 2442 | True | 1450.000000 | 2499 | 86.789000 | 134 | 2542 | 2 | chr3D.!!$R1 | 2408 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
687 | 766 | 0.034896 | AGTTTGAACCCGTGATCGCT | 59.965 | 50.0 | 4.48 | 0.0 | 35.54 | 4.93 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
2434 | 2651 | 0.109532 | TGGTCGGCTTGGTCAAATCA | 59.89 | 50.0 | 0.0 | 0.0 | 0.0 | 2.57 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
21 | 22 | 4.674281 | GAGTCTAGGGATTGGTTAGGTG | 57.326 | 50.000 | 0.00 | 0.00 | 0.00 | 4.00 |
22 | 23 | 2.772515 | AGTCTAGGGATTGGTTAGGTGC | 59.227 | 50.000 | 0.00 | 0.00 | 0.00 | 5.01 |
23 | 24 | 1.760613 | TCTAGGGATTGGTTAGGTGCG | 59.239 | 52.381 | 0.00 | 0.00 | 0.00 | 5.34 |
24 | 25 | 0.834612 | TAGGGATTGGTTAGGTGCGG | 59.165 | 55.000 | 0.00 | 0.00 | 0.00 | 5.69 |
25 | 26 | 2.119029 | GGGATTGGTTAGGTGCGGC | 61.119 | 63.158 | 0.00 | 0.00 | 0.00 | 6.53 |
26 | 27 | 2.119029 | GGATTGGTTAGGTGCGGCC | 61.119 | 63.158 | 0.00 | 0.00 | 37.58 | 6.13 |
27 | 28 | 1.377987 | GATTGGTTAGGTGCGGCCA | 60.378 | 57.895 | 2.24 | 0.00 | 40.61 | 5.36 |
28 | 29 | 1.654023 | GATTGGTTAGGTGCGGCCAC | 61.654 | 60.000 | 2.24 | 0.00 | 40.61 | 5.01 |
36 | 37 | 2.125512 | GTGCGGCCACCTACAGAG | 60.126 | 66.667 | 2.24 | 0.00 | 35.92 | 3.35 |
52 | 53 | 6.678857 | ACCTACAGAGGAGGATAATTTTCCTT | 59.321 | 38.462 | 17.33 | 4.11 | 46.35 | 3.36 |
53 | 54 | 7.147461 | ACCTACAGAGGAGGATAATTTTCCTTC | 60.147 | 40.741 | 17.33 | 15.60 | 46.35 | 3.46 |
54 | 55 | 6.642733 | ACAGAGGAGGATAATTTTCCTTCA | 57.357 | 37.500 | 21.43 | 0.00 | 46.35 | 3.02 |
55 | 56 | 6.418946 | ACAGAGGAGGATAATTTTCCTTCAC | 58.581 | 40.000 | 21.43 | 16.35 | 46.35 | 3.18 |
56 | 57 | 6.216456 | ACAGAGGAGGATAATTTTCCTTCACT | 59.784 | 38.462 | 21.43 | 18.02 | 46.35 | 3.41 |
57 | 58 | 7.403231 | ACAGAGGAGGATAATTTTCCTTCACTA | 59.597 | 37.037 | 21.43 | 0.00 | 46.35 | 2.74 |
58 | 59 | 8.267894 | CAGAGGAGGATAATTTTCCTTCACTAA | 58.732 | 37.037 | 21.43 | 0.00 | 46.35 | 2.24 |
59 | 60 | 9.008584 | AGAGGAGGATAATTTTCCTTCACTAAT | 57.991 | 33.333 | 21.43 | 4.27 | 46.35 | 1.73 |
60 | 61 | 9.634021 | GAGGAGGATAATTTTCCTTCACTAATT | 57.366 | 33.333 | 21.43 | 3.64 | 46.35 | 1.40 |
61 | 62 | 9.997172 | AGGAGGATAATTTTCCTTCACTAATTT | 57.003 | 29.630 | 21.43 | 0.68 | 46.35 | 1.82 |
69 | 70 | 7.443259 | TTTTCCTTCACTAATTTTAGACCGG | 57.557 | 36.000 | 0.00 | 0.00 | 34.84 | 5.28 |
70 | 71 | 6.363167 | TTCCTTCACTAATTTTAGACCGGA | 57.637 | 37.500 | 9.46 | 2.55 | 34.84 | 5.14 |
71 | 72 | 6.555463 | TCCTTCACTAATTTTAGACCGGAT | 57.445 | 37.500 | 9.46 | 0.00 | 34.84 | 4.18 |
72 | 73 | 7.664552 | TCCTTCACTAATTTTAGACCGGATA | 57.335 | 36.000 | 9.46 | 0.00 | 34.84 | 2.59 |
73 | 74 | 7.495055 | TCCTTCACTAATTTTAGACCGGATAC | 58.505 | 38.462 | 9.46 | 0.00 | 34.84 | 2.24 |
74 | 75 | 7.343833 | TCCTTCACTAATTTTAGACCGGATACT | 59.656 | 37.037 | 9.46 | 7.16 | 34.84 | 2.12 |
75 | 76 | 7.652507 | CCTTCACTAATTTTAGACCGGATACTC | 59.347 | 40.741 | 9.46 | 0.00 | 34.84 | 2.59 |
76 | 77 | 7.047460 | TCACTAATTTTAGACCGGATACTCC | 57.953 | 40.000 | 9.46 | 0.00 | 34.84 | 3.85 |
77 | 78 | 6.608405 | TCACTAATTTTAGACCGGATACTCCA | 59.392 | 38.462 | 9.46 | 0.00 | 33.83 | 3.86 |
78 | 79 | 6.700520 | CACTAATTTTAGACCGGATACTCCAC | 59.299 | 42.308 | 9.46 | 0.00 | 33.83 | 4.02 |
79 | 80 | 5.952347 | AATTTTAGACCGGATACTCCACT | 57.048 | 39.130 | 9.46 | 0.00 | 35.91 | 4.00 |
80 | 81 | 7.781693 | ACTAATTTTAGACCGGATACTCCACTA | 59.218 | 37.037 | 9.46 | 0.00 | 33.83 | 2.74 |
81 | 82 | 7.427989 | AATTTTAGACCGGATACTCCACTAA | 57.572 | 36.000 | 9.46 | 2.19 | 35.91 | 2.24 |
82 | 83 | 5.841957 | TTTAGACCGGATACTCCACTAAC | 57.158 | 43.478 | 9.46 | 0.00 | 35.91 | 2.34 |
83 | 84 | 3.666345 | AGACCGGATACTCCACTAACT | 57.334 | 47.619 | 9.46 | 0.00 | 35.91 | 2.24 |
84 | 85 | 3.978610 | AGACCGGATACTCCACTAACTT | 58.021 | 45.455 | 9.46 | 0.00 | 35.91 | 2.66 |
85 | 86 | 4.351127 | AGACCGGATACTCCACTAACTTT | 58.649 | 43.478 | 9.46 | 0.00 | 35.91 | 2.66 |
86 | 87 | 4.776308 | AGACCGGATACTCCACTAACTTTT | 59.224 | 41.667 | 9.46 | 0.00 | 35.91 | 2.27 |
87 | 88 | 5.954150 | AGACCGGATACTCCACTAACTTTTA | 59.046 | 40.000 | 9.46 | 0.00 | 35.91 | 1.52 |
88 | 89 | 6.096564 | AGACCGGATACTCCACTAACTTTTAG | 59.903 | 42.308 | 9.46 | 0.00 | 35.91 | 1.85 |
89 | 90 | 5.128335 | ACCGGATACTCCACTAACTTTTAGG | 59.872 | 44.000 | 9.46 | 0.00 | 35.91 | 2.69 |
90 | 91 | 5.452917 | CCGGATACTCCACTAACTTTTAGGG | 60.453 | 48.000 | 0.00 | 0.00 | 35.91 | 3.53 |
91 | 92 | 5.452917 | CGGATACTCCACTAACTTTTAGGGG | 60.453 | 48.000 | 7.80 | 7.80 | 39.46 | 4.79 |
92 | 93 | 5.664457 | GGATACTCCACTAACTTTTAGGGGA | 59.336 | 44.000 | 14.82 | 14.82 | 44.36 | 4.81 |
93 | 94 | 6.329460 | GGATACTCCACTAACTTTTAGGGGAT | 59.671 | 42.308 | 15.75 | 9.71 | 45.32 | 3.85 |
94 | 95 | 5.695424 | ACTCCACTAACTTTTAGGGGATC | 57.305 | 43.478 | 15.75 | 0.00 | 45.32 | 3.36 |
95 | 96 | 4.473922 | ACTCCACTAACTTTTAGGGGATCC | 59.526 | 45.833 | 15.75 | 1.92 | 45.32 | 3.36 |
96 | 97 | 3.453353 | TCCACTAACTTTTAGGGGATCCG | 59.547 | 47.826 | 12.14 | 0.00 | 41.89 | 4.18 |
97 | 98 | 3.199289 | CCACTAACTTTTAGGGGATCCGT | 59.801 | 47.826 | 8.35 | 0.00 | 40.55 | 4.69 |
98 | 99 | 4.324022 | CCACTAACTTTTAGGGGATCCGTT | 60.324 | 45.833 | 8.35 | 4.96 | 40.55 | 4.44 |
99 | 100 | 5.104817 | CCACTAACTTTTAGGGGATCCGTTA | 60.105 | 44.000 | 8.35 | 5.89 | 40.55 | 3.18 |
100 | 101 | 6.408869 | CACTAACTTTTAGGGGATCCGTTAA | 58.591 | 40.000 | 5.45 | 4.11 | 38.33 | 2.01 |
101 | 102 | 6.880529 | CACTAACTTTTAGGGGATCCGTTAAA | 59.119 | 38.462 | 5.45 | 10.06 | 38.33 | 1.52 |
102 | 103 | 7.555195 | CACTAACTTTTAGGGGATCCGTTAAAT | 59.445 | 37.037 | 15.86 | 7.73 | 38.33 | 1.40 |
103 | 104 | 8.111545 | ACTAACTTTTAGGGGATCCGTTAAATT | 58.888 | 33.333 | 15.86 | 12.11 | 38.33 | 1.82 |
104 | 105 | 7.786046 | AACTTTTAGGGGATCCGTTAAATTT | 57.214 | 32.000 | 15.86 | 11.27 | 38.33 | 1.82 |
105 | 106 | 7.165460 | ACTTTTAGGGGATCCGTTAAATTTG | 57.835 | 36.000 | 15.86 | 12.55 | 38.33 | 2.32 |
106 | 107 | 6.722590 | ACTTTTAGGGGATCCGTTAAATTTGT | 59.277 | 34.615 | 15.86 | 12.97 | 38.33 | 2.83 |
107 | 108 | 6.762702 | TTTAGGGGATCCGTTAAATTTGTC | 57.237 | 37.500 | 5.45 | 0.00 | 38.33 | 3.18 |
108 | 109 | 3.628008 | AGGGGATCCGTTAAATTTGTCC | 58.372 | 45.455 | 5.45 | 0.00 | 38.33 | 4.02 |
109 | 110 | 3.268595 | AGGGGATCCGTTAAATTTGTCCT | 59.731 | 43.478 | 5.45 | 0.00 | 38.33 | 3.85 |
110 | 111 | 3.630769 | GGGGATCCGTTAAATTTGTCCTC | 59.369 | 47.826 | 5.45 | 0.00 | 0.00 | 3.71 |
111 | 112 | 4.266714 | GGGATCCGTTAAATTTGTCCTCA | 58.733 | 43.478 | 5.45 | 0.00 | 0.00 | 3.86 |
112 | 113 | 4.335594 | GGGATCCGTTAAATTTGTCCTCAG | 59.664 | 45.833 | 5.45 | 0.00 | 0.00 | 3.35 |
113 | 114 | 4.201920 | GGATCCGTTAAATTTGTCCTCAGC | 60.202 | 45.833 | 0.00 | 0.00 | 0.00 | 4.26 |
114 | 115 | 4.015872 | TCCGTTAAATTTGTCCTCAGCT | 57.984 | 40.909 | 0.00 | 0.00 | 0.00 | 4.24 |
115 | 116 | 3.751175 | TCCGTTAAATTTGTCCTCAGCTG | 59.249 | 43.478 | 7.63 | 7.63 | 0.00 | 4.24 |
116 | 117 | 3.119849 | CCGTTAAATTTGTCCTCAGCTGG | 60.120 | 47.826 | 15.13 | 4.45 | 0.00 | 4.85 |
117 | 118 | 3.670627 | CGTTAAATTTGTCCTCAGCTGGC | 60.671 | 47.826 | 15.13 | 2.80 | 0.00 | 4.85 |
118 | 119 | 2.299326 | AAATTTGTCCTCAGCTGGCT | 57.701 | 45.000 | 15.13 | 0.00 | 0.00 | 4.75 |
119 | 120 | 2.299326 | AATTTGTCCTCAGCTGGCTT | 57.701 | 45.000 | 15.13 | 0.00 | 0.00 | 4.35 |
120 | 121 | 1.831580 | ATTTGTCCTCAGCTGGCTTC | 58.168 | 50.000 | 15.13 | 3.54 | 0.00 | 3.86 |
121 | 122 | 0.473755 | TTTGTCCTCAGCTGGCTTCA | 59.526 | 50.000 | 15.13 | 6.20 | 0.00 | 3.02 |
122 | 123 | 0.035881 | TTGTCCTCAGCTGGCTTCAG | 59.964 | 55.000 | 15.13 | 2.84 | 41.30 | 3.02 |
123 | 124 | 0.833409 | TGTCCTCAGCTGGCTTCAGA | 60.833 | 55.000 | 15.13 | 0.00 | 40.86 | 3.27 |
124 | 125 | 0.322975 | GTCCTCAGCTGGCTTCAGAA | 59.677 | 55.000 | 15.13 | 0.00 | 40.86 | 3.02 |
125 | 126 | 1.059098 | TCCTCAGCTGGCTTCAGAAA | 58.941 | 50.000 | 15.13 | 0.00 | 40.86 | 2.52 |
126 | 127 | 1.421268 | TCCTCAGCTGGCTTCAGAAAA | 59.579 | 47.619 | 15.13 | 0.00 | 40.86 | 2.29 |
127 | 128 | 1.538950 | CCTCAGCTGGCTTCAGAAAAC | 59.461 | 52.381 | 15.13 | 0.00 | 40.86 | 2.43 |
128 | 129 | 2.224606 | CTCAGCTGGCTTCAGAAAACA | 58.775 | 47.619 | 15.13 | 0.00 | 40.86 | 2.83 |
129 | 130 | 2.818432 | CTCAGCTGGCTTCAGAAAACAT | 59.182 | 45.455 | 15.13 | 0.00 | 40.86 | 2.71 |
130 | 131 | 3.225104 | TCAGCTGGCTTCAGAAAACATT | 58.775 | 40.909 | 15.13 | 0.00 | 40.86 | 2.71 |
131 | 132 | 3.005050 | TCAGCTGGCTTCAGAAAACATTG | 59.995 | 43.478 | 15.13 | 0.00 | 40.86 | 2.82 |
132 | 133 | 2.064014 | GCTGGCTTCAGAAAACATTGC | 58.936 | 47.619 | 0.00 | 0.00 | 40.86 | 3.56 |
185 | 186 | 3.422546 | GCGTATGCTCGATCAACTCTAAC | 59.577 | 47.826 | 0.00 | 0.00 | 38.39 | 2.34 |
190 | 191 | 6.992063 | ATGCTCGATCAACTCTAACAAAAT | 57.008 | 33.333 | 0.00 | 0.00 | 0.00 | 1.82 |
213 | 214 | 4.220693 | TGAAAATCCCTGATCATGACGT | 57.779 | 40.909 | 0.00 | 0.00 | 0.00 | 4.34 |
214 | 215 | 4.191544 | TGAAAATCCCTGATCATGACGTC | 58.808 | 43.478 | 9.11 | 9.11 | 0.00 | 4.34 |
215 | 216 | 2.515926 | AATCCCTGATCATGACGTCG | 57.484 | 50.000 | 11.62 | 0.00 | 0.00 | 5.12 |
216 | 217 | 1.692411 | ATCCCTGATCATGACGTCGA | 58.308 | 50.000 | 11.62 | 3.09 | 0.00 | 4.20 |
217 | 218 | 1.692411 | TCCCTGATCATGACGTCGAT | 58.308 | 50.000 | 11.62 | 8.38 | 0.00 | 3.59 |
218 | 219 | 1.609072 | TCCCTGATCATGACGTCGATC | 59.391 | 52.381 | 20.30 | 20.30 | 38.81 | 3.69 |
219 | 220 | 1.611006 | CCCTGATCATGACGTCGATCT | 59.389 | 52.381 | 24.58 | 7.41 | 39.06 | 2.75 |
220 | 221 | 2.814336 | CCCTGATCATGACGTCGATCTA | 59.186 | 50.000 | 24.58 | 14.91 | 39.06 | 1.98 |
221 | 222 | 3.253432 | CCCTGATCATGACGTCGATCTAA | 59.747 | 47.826 | 24.58 | 11.65 | 39.06 | 2.10 |
222 | 223 | 4.222886 | CCTGATCATGACGTCGATCTAAC | 58.777 | 47.826 | 24.58 | 10.10 | 39.06 | 2.34 |
223 | 224 | 4.261197 | CCTGATCATGACGTCGATCTAACA | 60.261 | 45.833 | 24.58 | 13.16 | 39.06 | 2.41 |
224 | 225 | 5.243426 | TGATCATGACGTCGATCTAACAA | 57.757 | 39.130 | 24.58 | 9.41 | 39.06 | 2.83 |
272 | 277 | 2.223537 | TACGCCGATCAGACGTACTA | 57.776 | 50.000 | 7.54 | 0.00 | 40.99 | 1.82 |
274 | 279 | 0.935898 | CGCCGATCAGACGTACTAGT | 59.064 | 55.000 | 0.00 | 0.00 | 0.00 | 2.57 |
275 | 280 | 2.130395 | CGCCGATCAGACGTACTAGTA | 58.870 | 52.381 | 0.00 | 0.00 | 0.00 | 1.82 |
276 | 281 | 2.097007 | CGCCGATCAGACGTACTAGTAC | 60.097 | 54.545 | 21.06 | 21.06 | 0.00 | 2.73 |
401 | 429 | 1.103803 | TGATCGAGAGGAAGAACCCG | 58.896 | 55.000 | 0.00 | 0.00 | 40.05 | 5.28 |
404 | 432 | 2.585153 | GAGAGGAAGAACCCGCCC | 59.415 | 66.667 | 0.00 | 0.00 | 40.05 | 6.13 |
406 | 434 | 1.539124 | AGAGGAAGAACCCGCCCTT | 60.539 | 57.895 | 0.00 | 0.00 | 40.05 | 3.95 |
415 | 443 | 2.280865 | CCCGCCCTTCTTATCGCC | 60.281 | 66.667 | 0.00 | 0.00 | 0.00 | 5.54 |
416 | 444 | 2.808206 | CCCGCCCTTCTTATCGCCT | 61.808 | 63.158 | 0.00 | 0.00 | 0.00 | 5.52 |
441 | 469 | 1.659098 | CTCCTCGCATTAAACACCGTC | 59.341 | 52.381 | 0.00 | 0.00 | 0.00 | 4.79 |
442 | 470 | 0.725117 | CCTCGCATTAAACACCGTCC | 59.275 | 55.000 | 0.00 | 0.00 | 0.00 | 4.79 |
443 | 471 | 0.725117 | CTCGCATTAAACACCGTCCC | 59.275 | 55.000 | 0.00 | 0.00 | 0.00 | 4.46 |
444 | 472 | 1.015085 | TCGCATTAAACACCGTCCCG | 61.015 | 55.000 | 0.00 | 0.00 | 0.00 | 5.14 |
445 | 473 | 1.135939 | GCATTAAACACCGTCCCGC | 59.864 | 57.895 | 0.00 | 0.00 | 0.00 | 6.13 |
446 | 474 | 1.303091 | GCATTAAACACCGTCCCGCT | 61.303 | 55.000 | 0.00 | 0.00 | 0.00 | 5.52 |
447 | 475 | 0.725117 | CATTAAACACCGTCCCGCTC | 59.275 | 55.000 | 0.00 | 0.00 | 0.00 | 5.03 |
448 | 476 | 0.392060 | ATTAAACACCGTCCCGCTCC | 60.392 | 55.000 | 0.00 | 0.00 | 0.00 | 4.70 |
449 | 477 | 2.768503 | TTAAACACCGTCCCGCTCCG | 62.769 | 60.000 | 0.00 | 0.00 | 0.00 | 4.63 |
462 | 490 | 2.792947 | GCTCCGGTCCCGATTAGCA | 61.793 | 63.158 | 7.42 | 0.00 | 42.83 | 3.49 |
464 | 492 | 2.280186 | CCGGTCCCGATTAGCAGC | 60.280 | 66.667 | 7.42 | 0.00 | 42.83 | 5.25 |
481 | 509 | 1.889105 | GCCGCGTCATGGATGATGT | 60.889 | 57.895 | 4.92 | 0.00 | 43.88 | 3.06 |
644 | 723 | 4.494690 | CGTGAACGCATGAGCATAGATTTT | 60.495 | 41.667 | 0.00 | 0.00 | 42.27 | 1.82 |
649 | 728 | 3.608707 | CGCATGAGCATAGATTTTCCAGC | 60.609 | 47.826 | 0.00 | 0.00 | 42.27 | 4.85 |
650 | 729 | 3.305199 | GCATGAGCATAGATTTTCCAGCC | 60.305 | 47.826 | 0.00 | 0.00 | 41.58 | 4.85 |
651 | 730 | 3.650281 | TGAGCATAGATTTTCCAGCCA | 57.350 | 42.857 | 0.00 | 0.00 | 0.00 | 4.75 |
652 | 731 | 3.548770 | TGAGCATAGATTTTCCAGCCAG | 58.451 | 45.455 | 0.00 | 0.00 | 0.00 | 4.85 |
653 | 732 | 2.292845 | GAGCATAGATTTTCCAGCCAGC | 59.707 | 50.000 | 0.00 | 0.00 | 0.00 | 4.85 |
654 | 733 | 1.339291 | GCATAGATTTTCCAGCCAGCC | 59.661 | 52.381 | 0.00 | 0.00 | 0.00 | 4.85 |
655 | 734 | 1.959282 | CATAGATTTTCCAGCCAGCCC | 59.041 | 52.381 | 0.00 | 0.00 | 0.00 | 5.19 |
656 | 735 | 0.998928 | TAGATTTTCCAGCCAGCCCA | 59.001 | 50.000 | 0.00 | 0.00 | 0.00 | 5.36 |
687 | 766 | 0.034896 | AGTTTGAACCCGTGATCGCT | 59.965 | 50.000 | 4.48 | 0.00 | 35.54 | 4.93 |
737 | 816 | 3.970842 | TCAACAACACCCCACTAAACTT | 58.029 | 40.909 | 0.00 | 0.00 | 0.00 | 2.66 |
738 | 817 | 5.113446 | TCAACAACACCCCACTAAACTTA | 57.887 | 39.130 | 0.00 | 0.00 | 0.00 | 2.24 |
739 | 818 | 5.127491 | TCAACAACACCCCACTAAACTTAG | 58.873 | 41.667 | 0.00 | 0.00 | 36.82 | 2.18 |
740 | 819 | 3.483421 | ACAACACCCCACTAAACTTAGC | 58.517 | 45.455 | 0.00 | 0.00 | 34.09 | 3.09 |
741 | 820 | 3.117813 | ACAACACCCCACTAAACTTAGCA | 60.118 | 43.478 | 0.00 | 0.00 | 34.09 | 3.49 |
742 | 821 | 3.868619 | ACACCCCACTAAACTTAGCAA | 57.131 | 42.857 | 0.00 | 0.00 | 34.09 | 3.91 |
743 | 822 | 3.483421 | ACACCCCACTAAACTTAGCAAC | 58.517 | 45.455 | 0.00 | 0.00 | 34.09 | 4.17 |
744 | 823 | 2.482721 | CACCCCACTAAACTTAGCAACG | 59.517 | 50.000 | 0.00 | 0.00 | 34.09 | 4.10 |
770 | 849 | 4.439057 | TCAAGAAGCTTCACACGTACTTT | 58.561 | 39.130 | 27.57 | 7.54 | 0.00 | 2.66 |
773 | 852 | 2.902705 | AGCTTCACACGTACTTTCCA | 57.097 | 45.000 | 0.00 | 0.00 | 0.00 | 3.53 |
774 | 853 | 2.480845 | AGCTTCACACGTACTTTCCAC | 58.519 | 47.619 | 0.00 | 0.00 | 0.00 | 4.02 |
777 | 856 | 3.064271 | GCTTCACACGTACTTTCCACAAA | 59.936 | 43.478 | 0.00 | 0.00 | 0.00 | 2.83 |
779 | 858 | 4.603231 | TCACACGTACTTTCCACAAAAC | 57.397 | 40.909 | 0.00 | 0.00 | 0.00 | 2.43 |
780 | 859 | 4.001652 | TCACACGTACTTTCCACAAAACA | 58.998 | 39.130 | 0.00 | 0.00 | 0.00 | 2.83 |
781 | 860 | 4.454847 | TCACACGTACTTTCCACAAAACAA | 59.545 | 37.500 | 0.00 | 0.00 | 0.00 | 2.83 |
791 | 870 | 8.702163 | ACTTTCCACAAAACAAAAGATAACAG | 57.298 | 30.769 | 0.00 | 0.00 | 33.85 | 3.16 |
795 | 874 | 8.740123 | TCCACAAAACAAAAGATAACAGAGTA | 57.260 | 30.769 | 0.00 | 0.00 | 0.00 | 2.59 |
796 | 875 | 8.836413 | TCCACAAAACAAAAGATAACAGAGTAG | 58.164 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
797 | 876 | 7.591426 | CCACAAAACAAAAGATAACAGAGTAGC | 59.409 | 37.037 | 0.00 | 0.00 | 0.00 | 3.58 |
798 | 877 | 7.321271 | CACAAAACAAAAGATAACAGAGTAGCG | 59.679 | 37.037 | 0.00 | 0.00 | 0.00 | 4.26 |
799 | 878 | 7.012044 | ACAAAACAAAAGATAACAGAGTAGCGT | 59.988 | 33.333 | 0.00 | 0.00 | 0.00 | 5.07 |
800 | 879 | 8.492748 | CAAAACAAAAGATAACAGAGTAGCGTA | 58.507 | 33.333 | 0.00 | 0.00 | 0.00 | 4.42 |
890 | 969 | 2.663852 | CACCCACCAACCGACGAC | 60.664 | 66.667 | 0.00 | 0.00 | 0.00 | 4.34 |
891 | 970 | 4.289245 | ACCCACCAACCGACGACG | 62.289 | 66.667 | 0.00 | 0.00 | 39.43 | 5.12 |
892 | 971 | 4.289245 | CCCACCAACCGACGACGT | 62.289 | 66.667 | 0.00 | 0.00 | 37.88 | 4.34 |
893 | 972 | 2.732094 | CCACCAACCGACGACGTC | 60.732 | 66.667 | 18.04 | 18.04 | 37.88 | 4.34 |
929 | 1008 | 2.052104 | CCTCCAAAACCGCATCCCC | 61.052 | 63.158 | 0.00 | 0.00 | 0.00 | 4.81 |
930 | 1009 | 1.304052 | CTCCAAAACCGCATCCCCA | 60.304 | 57.895 | 0.00 | 0.00 | 0.00 | 4.96 |
932 | 1011 | 2.566010 | CAAAACCGCATCCCCACG | 59.434 | 61.111 | 0.00 | 0.00 | 0.00 | 4.94 |
979 | 1070 | 2.635443 | CCACCCGCAACCATCCAAC | 61.635 | 63.158 | 0.00 | 0.00 | 0.00 | 3.77 |
982 | 1073 | 3.439540 | CCGCAACCATCCAACCCG | 61.440 | 66.667 | 0.00 | 0.00 | 0.00 | 5.28 |
983 | 1074 | 3.439540 | CGCAACCATCCAACCCGG | 61.440 | 66.667 | 0.00 | 0.00 | 0.00 | 5.73 |
984 | 1075 | 3.758931 | GCAACCATCCAACCCGGC | 61.759 | 66.667 | 0.00 | 0.00 | 33.14 | 6.13 |
985 | 1076 | 2.282816 | CAACCATCCAACCCGGCA | 60.283 | 61.111 | 0.00 | 0.00 | 33.14 | 5.69 |
986 | 1077 | 1.905843 | CAACCATCCAACCCGGCAA | 60.906 | 57.895 | 0.00 | 0.00 | 33.14 | 4.52 |
987 | 1078 | 1.152440 | AACCATCCAACCCGGCAAA | 60.152 | 52.632 | 0.00 | 0.00 | 33.14 | 3.68 |
988 | 1079 | 1.184970 | AACCATCCAACCCGGCAAAG | 61.185 | 55.000 | 0.00 | 0.00 | 33.14 | 2.77 |
2066 | 2160 | 5.887288 | CGCACGTACGTGTCTAAATTAATTC | 59.113 | 40.000 | 39.56 | 22.00 | 46.90 | 2.17 |
2085 | 2181 | 0.928229 | CGCACGCTGGTAATACTTCC | 59.072 | 55.000 | 0.00 | 0.00 | 0.00 | 3.46 |
2092 | 2188 | 2.676342 | GCTGGTAATACTTCCGTGTTGG | 59.324 | 50.000 | 0.00 | 0.00 | 40.09 | 3.77 |
2108 | 2204 | 4.002982 | GTGTTGGTGATCAGCTGATGTAA | 58.997 | 43.478 | 33.33 | 18.10 | 34.37 | 2.41 |
2116 | 2212 | 6.647067 | GGTGATCAGCTGATGTAAATACTACC | 59.353 | 42.308 | 33.33 | 19.50 | 34.37 | 3.18 |
2121 | 2217 | 6.544931 | TCAGCTGATGTAAATACTACCGTACT | 59.455 | 38.462 | 13.74 | 0.00 | 0.00 | 2.73 |
2122 | 2218 | 7.067859 | TCAGCTGATGTAAATACTACCGTACTT | 59.932 | 37.037 | 13.74 | 0.00 | 0.00 | 2.24 |
2134 | 2230 | 9.892130 | AATACTACCGTACTTTAGTAGTAGTGT | 57.108 | 33.333 | 20.86 | 15.76 | 46.90 | 3.55 |
2171 | 2267 | 3.278668 | TCGAGGAGATTCTTCCGTACT | 57.721 | 47.619 | 0.00 | 0.00 | 42.29 | 2.73 |
2173 | 2269 | 4.774124 | TCGAGGAGATTCTTCCGTACTTA | 58.226 | 43.478 | 0.00 | 0.00 | 42.29 | 2.24 |
2174 | 2270 | 5.374921 | TCGAGGAGATTCTTCCGTACTTAT | 58.625 | 41.667 | 0.00 | 0.00 | 42.29 | 1.73 |
2175 | 2271 | 5.238868 | TCGAGGAGATTCTTCCGTACTTATG | 59.761 | 44.000 | 0.00 | 0.00 | 42.29 | 1.90 |
2179 | 2276 | 4.950050 | AGATTCTTCCGTACTTATGCAGG | 58.050 | 43.478 | 0.00 | 0.00 | 0.00 | 4.85 |
2182 | 2279 | 4.811969 | TCTTCCGTACTTATGCAGGAAA | 57.188 | 40.909 | 3.30 | 0.00 | 40.06 | 3.13 |
2186 | 2283 | 5.811399 | TCCGTACTTATGCAGGAAATTTG | 57.189 | 39.130 | 0.00 | 0.00 | 0.00 | 2.32 |
2190 | 2287 | 6.093495 | CCGTACTTATGCAGGAAATTTGAGAA | 59.907 | 38.462 | 0.00 | 0.00 | 0.00 | 2.87 |
2199 | 2296 | 6.925165 | TGCAGGAAATTTGAGAAACTGATTTC | 59.075 | 34.615 | 0.00 | 0.00 | 44.02 | 2.17 |
2200 | 2297 | 6.925165 | GCAGGAAATTTGAGAAACTGATTTCA | 59.075 | 34.615 | 0.00 | 0.00 | 45.78 | 2.69 |
2260 | 2360 | 8.594881 | TTTTGTGAGAGAAACTTCTGATCTAC | 57.405 | 34.615 | 0.00 | 0.00 | 37.73 | 2.59 |
2261 | 2361 | 7.531857 | TTGTGAGAGAAACTTCTGATCTACT | 57.468 | 36.000 | 0.00 | 0.00 | 37.73 | 2.57 |
2262 | 2362 | 8.637196 | TTGTGAGAGAAACTTCTGATCTACTA | 57.363 | 34.615 | 0.00 | 0.00 | 37.73 | 1.82 |
2293 | 2393 | 6.648879 | TTCTTTGTCTGGTAAATTTCAGGG | 57.351 | 37.500 | 0.00 | 0.00 | 0.00 | 4.45 |
2294 | 2394 | 5.701224 | TCTTTGTCTGGTAAATTTCAGGGT | 58.299 | 37.500 | 0.00 | 0.00 | 0.00 | 4.34 |
2311 | 2411 | 4.356289 | CAGGGTAACTGGTTTCAAAAACG | 58.644 | 43.478 | 0.00 | 0.00 | 43.70 | 3.60 |
2314 | 2414 | 5.361571 | AGGGTAACTGGTTTCAAAAACGAAT | 59.638 | 36.000 | 0.00 | 0.00 | 0.00 | 3.34 |
2317 | 2417 | 7.380333 | GGGTAACTGGTTTCAAAAACGAATTAG | 59.620 | 37.037 | 0.00 | 0.00 | 0.00 | 1.73 |
2319 | 2419 | 9.934190 | GTAACTGGTTTCAAAAACGAATTAGTA | 57.066 | 29.630 | 0.00 | 0.00 | 0.00 | 1.82 |
2320 | 2420 | 8.845942 | AACTGGTTTCAAAAACGAATTAGTAC | 57.154 | 30.769 | 0.00 | 0.00 | 0.00 | 2.73 |
2321 | 2421 | 8.217131 | ACTGGTTTCAAAAACGAATTAGTACT | 57.783 | 30.769 | 0.00 | 0.00 | 0.00 | 2.73 |
2324 | 2424 | 9.291664 | TGGTTTCAAAAACGAATTAGTACTTTG | 57.708 | 29.630 | 0.00 | 14.71 | 32.67 | 2.77 |
2325 | 2425 | 9.292846 | GGTTTCAAAAACGAATTAGTACTTTGT | 57.707 | 29.630 | 17.77 | 0.00 | 32.96 | 2.83 |
2330 | 2430 | 9.403869 | CAAAAACGAATTAGTACTTTGTTTTGC | 57.596 | 29.630 | 22.40 | 0.00 | 44.00 | 3.68 |
2332 | 2432 | 7.908193 | AACGAATTAGTACTTTGTTTTGCAG | 57.092 | 32.000 | 0.00 | 0.00 | 27.96 | 4.41 |
2373 | 2590 | 2.545952 | CGTGGGTGTATCTAGGTGATGC | 60.546 | 54.545 | 0.00 | 0.00 | 38.12 | 3.91 |
2430 | 2647 | 3.857052 | CAAGCTAAAGTGGACGGTGATA | 58.143 | 45.455 | 0.00 | 0.00 | 0.00 | 2.15 |
2434 | 2651 | 4.894114 | AGCTAAAGTGGACGGTGATAGTAT | 59.106 | 41.667 | 0.00 | 0.00 | 0.00 | 2.12 |
2450 | 2667 | 3.627395 | AGTATGATTTGACCAAGCCGA | 57.373 | 42.857 | 0.00 | 0.00 | 0.00 | 5.54 |
2451 | 2668 | 3.270877 | AGTATGATTTGACCAAGCCGAC | 58.729 | 45.455 | 0.00 | 0.00 | 0.00 | 4.79 |
2452 | 2669 | 1.463674 | ATGATTTGACCAAGCCGACC | 58.536 | 50.000 | 0.00 | 0.00 | 0.00 | 4.79 |
2453 | 2670 | 0.109532 | TGATTTGACCAAGCCGACCA | 59.890 | 50.000 | 0.00 | 0.00 | 0.00 | 4.02 |
2454 | 2671 | 1.271871 | TGATTTGACCAAGCCGACCAT | 60.272 | 47.619 | 0.00 | 0.00 | 0.00 | 3.55 |
2455 | 2672 | 1.401905 | GATTTGACCAAGCCGACCATC | 59.598 | 52.381 | 0.00 | 0.00 | 0.00 | 3.51 |
2456 | 2673 | 0.109532 | TTTGACCAAGCCGACCATCA | 59.890 | 50.000 | 0.00 | 0.00 | 0.00 | 3.07 |
2457 | 2674 | 0.605319 | TTGACCAAGCCGACCATCAC | 60.605 | 55.000 | 0.00 | 0.00 | 0.00 | 3.06 |
2458 | 2675 | 2.047274 | ACCAAGCCGACCATCACG | 60.047 | 61.111 | 0.00 | 0.00 | 0.00 | 4.35 |
2459 | 2676 | 2.264480 | CCAAGCCGACCATCACGA | 59.736 | 61.111 | 0.00 | 0.00 | 0.00 | 4.35 |
2460 | 2677 | 2.100631 | CCAAGCCGACCATCACGAC | 61.101 | 63.158 | 0.00 | 0.00 | 0.00 | 4.34 |
2461 | 2678 | 1.079819 | CAAGCCGACCATCACGACT | 60.080 | 57.895 | 0.00 | 0.00 | 0.00 | 4.18 |
2462 | 2679 | 0.670546 | CAAGCCGACCATCACGACTT | 60.671 | 55.000 | 0.00 | 0.00 | 34.24 | 3.01 |
2463 | 2680 | 0.034896 | AAGCCGACCATCACGACTTT | 59.965 | 50.000 | 0.00 | 0.00 | 30.28 | 2.66 |
2464 | 2681 | 0.892755 | AGCCGACCATCACGACTTTA | 59.107 | 50.000 | 0.00 | 0.00 | 0.00 | 1.85 |
2465 | 2682 | 1.135083 | AGCCGACCATCACGACTTTAG | 60.135 | 52.381 | 0.00 | 0.00 | 0.00 | 1.85 |
2466 | 2683 | 1.922570 | CCGACCATCACGACTTTAGG | 58.077 | 55.000 | 0.00 | 0.00 | 0.00 | 2.69 |
2467 | 2684 | 1.470979 | CCGACCATCACGACTTTAGGG | 60.471 | 57.143 | 0.00 | 0.00 | 0.00 | 3.53 |
2468 | 2685 | 1.475280 | CGACCATCACGACTTTAGGGA | 59.525 | 52.381 | 0.00 | 0.00 | 0.00 | 4.20 |
2469 | 2686 | 2.479730 | CGACCATCACGACTTTAGGGAG | 60.480 | 54.545 | 0.00 | 0.00 | 0.00 | 4.30 |
2470 | 2687 | 2.758979 | GACCATCACGACTTTAGGGAGA | 59.241 | 50.000 | 0.00 | 0.00 | 0.00 | 3.71 |
2471 | 2688 | 2.761208 | ACCATCACGACTTTAGGGAGAG | 59.239 | 50.000 | 0.00 | 0.00 | 0.00 | 3.20 |
2472 | 2689 | 2.482142 | CCATCACGACTTTAGGGAGAGC | 60.482 | 54.545 | 0.00 | 0.00 | 0.00 | 4.09 |
2473 | 2690 | 1.183549 | TCACGACTTTAGGGAGAGCC | 58.816 | 55.000 | 0.00 | 0.00 | 0.00 | 4.70 |
2474 | 2691 | 0.179134 | CACGACTTTAGGGAGAGCCG | 60.179 | 60.000 | 0.00 | 0.00 | 33.83 | 5.52 |
2477 | 2694 | 1.955080 | CGACTTTAGGGAGAGCCGTAT | 59.045 | 52.381 | 0.00 | 0.00 | 34.71 | 3.06 |
2489 | 2706 | 0.546122 | AGCCGTATGATTTCCTGGCA | 59.454 | 50.000 | 3.68 | 0.00 | 44.83 | 4.92 |
2493 | 2710 | 3.415212 | CCGTATGATTTCCTGGCATCAT | 58.585 | 45.455 | 19.20 | 19.20 | 41.89 | 2.45 |
2505 | 2722 | 2.411535 | GCATCATGCCAGCTGCTAA | 58.588 | 52.632 | 8.66 | 0.00 | 42.00 | 3.09 |
2506 | 2723 | 0.030369 | GCATCATGCCAGCTGCTAAC | 59.970 | 55.000 | 8.66 | 0.00 | 42.00 | 2.34 |
2507 | 2724 | 1.385528 | CATCATGCCAGCTGCTAACA | 58.614 | 50.000 | 8.66 | 3.80 | 42.00 | 2.41 |
2549 | 3079 | 3.888323 | TGTGGTCAGCATACAAAACATGT | 59.112 | 39.130 | 0.00 | 0.00 | 46.36 | 3.21 |
2554 | 3084 | 5.630680 | GGTCAGCATACAAAACATGTTTGAG | 59.369 | 40.000 | 23.93 | 20.31 | 41.78 | 3.02 |
2557 | 3087 | 6.917477 | TCAGCATACAAAACATGTTTGAGAAC | 59.083 | 34.615 | 23.93 | 12.27 | 41.78 | 3.01 |
2565 | 4231 | 3.206150 | ACATGTTTGAGAACTGTTCGCT | 58.794 | 40.909 | 21.78 | 4.10 | 36.70 | 4.93 |
2571 | 4237 | 5.049680 | TGTTTGAGAACTGTTCGCTAATTCC | 60.050 | 40.000 | 21.78 | 11.36 | 36.70 | 3.01 |
2576 | 4242 | 5.758924 | AGAACTGTTCGCTAATTCCAAAAC | 58.241 | 37.500 | 14.35 | 0.00 | 34.02 | 2.43 |
2578 | 4244 | 5.705609 | ACTGTTCGCTAATTCCAAAACAT | 57.294 | 34.783 | 0.00 | 0.00 | 0.00 | 2.71 |
2579 | 4245 | 5.460646 | ACTGTTCGCTAATTCCAAAACATG | 58.539 | 37.500 | 0.00 | 0.00 | 0.00 | 3.21 |
2616 | 4415 | 8.975410 | AAACATGTTCATGAGTTCATACAATG | 57.025 | 30.769 | 12.39 | 0.78 | 34.26 | 2.82 |
2626 | 4426 | 7.581213 | TGAGTTCATACAATGTTCACCTTTT | 57.419 | 32.000 | 0.00 | 0.00 | 0.00 | 2.27 |
2638 | 4438 | 9.701355 | CAATGTTCACCTTTTTAAAAACATGTC | 57.299 | 29.630 | 9.31 | 8.81 | 37.40 | 3.06 |
2644 | 4444 | 9.712305 | TCACCTTTTTAAAAACATGTCTCAAAA | 57.288 | 25.926 | 9.31 | 1.40 | 0.00 | 2.44 |
2648 | 4448 | 9.848172 | CTTTTTAAAAACATGTCTCAAAATCCG | 57.152 | 29.630 | 9.31 | 0.00 | 0.00 | 4.18 |
2650 | 4450 | 8.568732 | TTTAAAAACATGTCTCAAAATCCGAC | 57.431 | 30.769 | 0.00 | 0.00 | 0.00 | 4.79 |
2658 | 4458 | 4.036262 | TGTCTCAAAATCCGACCAAAAGTG | 59.964 | 41.667 | 0.00 | 0.00 | 0.00 | 3.16 |
2662 | 4462 | 4.580995 | TCAAAATCCGACCAAAAGTGCTAA | 59.419 | 37.500 | 0.00 | 0.00 | 0.00 | 3.09 |
2664 | 4464 | 5.523438 | AAATCCGACCAAAAGTGCTAAAA | 57.477 | 34.783 | 0.00 | 0.00 | 0.00 | 1.52 |
2666 | 4466 | 5.722021 | ATCCGACCAAAAGTGCTAAAATT | 57.278 | 34.783 | 0.00 | 0.00 | 0.00 | 1.82 |
2667 | 4467 | 5.523438 | TCCGACCAAAAGTGCTAAAATTT | 57.477 | 34.783 | 0.00 | 0.00 | 0.00 | 1.82 |
2672 | 4472 | 8.059502 | CCGACCAAAAGTGCTAAAATTTAAAAC | 58.940 | 33.333 | 0.00 | 0.00 | 0.00 | 2.43 |
2673 | 4473 | 8.059502 | CGACCAAAAGTGCTAAAATTTAAAACC | 58.940 | 33.333 | 0.00 | 0.00 | 0.00 | 3.27 |
2675 | 4475 | 8.670135 | ACCAAAAGTGCTAAAATTTAAAACCAC | 58.330 | 29.630 | 0.00 | 0.00 | 0.00 | 4.16 |
2676 | 4476 | 8.888716 | CCAAAAGTGCTAAAATTTAAAACCACT | 58.111 | 29.630 | 0.00 | 0.00 | 34.10 | 4.00 |
2826 | 4626 | 9.439500 | AATTCCCACTTTTGACAAATATTCATG | 57.561 | 29.630 | 0.50 | 0.00 | 0.00 | 3.07 |
2945 | 4746 | 6.241645 | AGGTTCTAGAACATTCTTGGAAAGG | 58.758 | 40.000 | 31.30 | 0.00 | 42.91 | 3.11 |
2955 | 4756 | 7.232118 | ACATTCTTGGAAAGGACCATAAAAG | 57.768 | 36.000 | 0.00 | 0.00 | 46.24 | 2.27 |
2956 | 4757 | 7.010160 | ACATTCTTGGAAAGGACCATAAAAGA | 58.990 | 34.615 | 0.00 | 0.00 | 46.24 | 2.52 |
2962 | 4763 | 2.029838 | AGGACCATAAAAGAGCTGCG | 57.970 | 50.000 | 0.00 | 0.00 | 0.00 | 5.18 |
2987 | 4788 | 2.851195 | CAAGCCCAAGTAGACTGTTGT | 58.149 | 47.619 | 0.00 | 0.00 | 0.00 | 3.32 |
2988 | 4789 | 3.805807 | GCAAGCCCAAGTAGACTGTTGTA | 60.806 | 47.826 | 0.00 | 0.00 | 0.00 | 2.41 |
2989 | 4790 | 3.963428 | AGCCCAAGTAGACTGTTGTAG | 57.037 | 47.619 | 0.00 | 0.00 | 0.00 | 2.74 |
2994 | 4795 | 4.159879 | CCCAAGTAGACTGTTGTAGGTAGG | 59.840 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
2995 | 4796 | 4.159879 | CCAAGTAGACTGTTGTAGGTAGGG | 59.840 | 50.000 | 0.00 | 0.00 | 0.00 | 3.53 |
2996 | 4797 | 4.671596 | AGTAGACTGTTGTAGGTAGGGT | 57.328 | 45.455 | 0.00 | 0.00 | 0.00 | 4.34 |
3004 | 4805 | 2.234661 | GTTGTAGGTAGGGTGGTGGTAC | 59.765 | 54.545 | 0.00 | 0.00 | 0.00 | 3.34 |
3020 | 4821 | 1.483316 | GTACGCGTGTGCTGCATATA | 58.517 | 50.000 | 24.59 | 0.00 | 39.65 | 0.86 |
3021 | 4822 | 1.189446 | GTACGCGTGTGCTGCATATAC | 59.811 | 52.381 | 24.59 | 2.90 | 39.65 | 1.47 |
3033 | 4834 | 5.178252 | GTGCTGCATATACACCAGTGATAAG | 59.822 | 44.000 | 5.27 | 0.00 | 0.00 | 1.73 |
3034 | 4835 | 5.070313 | TGCTGCATATACACCAGTGATAAGA | 59.930 | 40.000 | 4.48 | 0.00 | 0.00 | 2.10 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
0 | 1 | 3.181464 | GCACCTAACCAATCCCTAGACTC | 60.181 | 52.174 | 0.00 | 0.00 | 0.00 | 3.36 |
1 | 2 | 2.772515 | GCACCTAACCAATCCCTAGACT | 59.227 | 50.000 | 0.00 | 0.00 | 0.00 | 3.24 |
2 | 3 | 2.483188 | CGCACCTAACCAATCCCTAGAC | 60.483 | 54.545 | 0.00 | 0.00 | 0.00 | 2.59 |
3 | 4 | 1.760613 | CGCACCTAACCAATCCCTAGA | 59.239 | 52.381 | 0.00 | 0.00 | 0.00 | 2.43 |
4 | 5 | 1.202651 | CCGCACCTAACCAATCCCTAG | 60.203 | 57.143 | 0.00 | 0.00 | 0.00 | 3.02 |
5 | 6 | 0.834612 | CCGCACCTAACCAATCCCTA | 59.165 | 55.000 | 0.00 | 0.00 | 0.00 | 3.53 |
6 | 7 | 1.607612 | CCGCACCTAACCAATCCCT | 59.392 | 57.895 | 0.00 | 0.00 | 0.00 | 4.20 |
7 | 8 | 2.119029 | GCCGCACCTAACCAATCCC | 61.119 | 63.158 | 0.00 | 0.00 | 0.00 | 3.85 |
8 | 9 | 2.119029 | GGCCGCACCTAACCAATCC | 61.119 | 63.158 | 0.00 | 0.00 | 34.51 | 3.01 |
9 | 10 | 1.377987 | TGGCCGCACCTAACCAATC | 60.378 | 57.895 | 0.00 | 0.00 | 40.22 | 2.67 |
10 | 11 | 1.677633 | GTGGCCGCACCTAACCAAT | 60.678 | 57.895 | 12.58 | 0.00 | 40.22 | 3.16 |
11 | 12 | 2.281900 | GTGGCCGCACCTAACCAA | 60.282 | 61.111 | 12.58 | 0.00 | 40.22 | 3.67 |
12 | 13 | 4.338710 | GGTGGCCGCACCTAACCA | 62.339 | 66.667 | 19.98 | 0.00 | 41.84 | 3.67 |
18 | 19 | 3.665675 | CTCTGTAGGTGGCCGCACC | 62.666 | 68.421 | 19.98 | 11.81 | 45.31 | 5.01 |
19 | 20 | 2.125512 | CTCTGTAGGTGGCCGCAC | 60.126 | 66.667 | 19.98 | 9.36 | 0.00 | 5.34 |
20 | 21 | 3.390521 | CCTCTGTAGGTGGCCGCA | 61.391 | 66.667 | 19.98 | 0.00 | 38.19 | 5.69 |
21 | 22 | 3.075005 | TCCTCTGTAGGTGGCCGC | 61.075 | 66.667 | 8.12 | 8.12 | 44.09 | 6.53 |
22 | 23 | 2.427245 | CCTCCTCTGTAGGTGGCCG | 61.427 | 68.421 | 0.00 | 0.00 | 46.76 | 6.13 |
23 | 24 | 3.635510 | CCTCCTCTGTAGGTGGCC | 58.364 | 66.667 | 0.00 | 0.00 | 46.76 | 5.36 |
26 | 27 | 6.292150 | GGAAAATTATCCTCCTCTGTAGGTG | 58.708 | 44.000 | 0.00 | 0.00 | 44.09 | 4.00 |
27 | 28 | 6.502074 | GGAAAATTATCCTCCTCTGTAGGT | 57.498 | 41.667 | 0.00 | 0.00 | 44.09 | 3.08 |
43 | 44 | 8.520351 | CCGGTCTAAAATTAGTGAAGGAAAATT | 58.480 | 33.333 | 0.00 | 0.00 | 32.61 | 1.82 |
44 | 45 | 7.886446 | TCCGGTCTAAAATTAGTGAAGGAAAAT | 59.114 | 33.333 | 0.00 | 0.00 | 32.61 | 1.82 |
45 | 46 | 7.225725 | TCCGGTCTAAAATTAGTGAAGGAAAA | 58.774 | 34.615 | 0.00 | 0.00 | 32.61 | 2.29 |
46 | 47 | 6.771573 | TCCGGTCTAAAATTAGTGAAGGAAA | 58.228 | 36.000 | 0.00 | 0.00 | 32.61 | 3.13 |
47 | 48 | 6.363167 | TCCGGTCTAAAATTAGTGAAGGAA | 57.637 | 37.500 | 0.00 | 0.00 | 32.61 | 3.36 |
48 | 49 | 6.555463 | ATCCGGTCTAAAATTAGTGAAGGA | 57.445 | 37.500 | 0.00 | 6.16 | 32.61 | 3.36 |
49 | 50 | 7.498443 | AGTATCCGGTCTAAAATTAGTGAAGG | 58.502 | 38.462 | 0.00 | 1.78 | 32.61 | 3.46 |
50 | 51 | 8.576936 | GAGTATCCGGTCTAAAATTAGTGAAG | 57.423 | 38.462 | 0.00 | 0.00 | 32.61 | 3.02 |
69 | 70 | 6.803366 | TCCCCTAAAAGTTAGTGGAGTATC | 57.197 | 41.667 | 0.00 | 0.00 | 0.00 | 2.24 |
70 | 71 | 6.329460 | GGATCCCCTAAAAGTTAGTGGAGTAT | 59.671 | 42.308 | 0.00 | 0.00 | 0.00 | 2.12 |
71 | 72 | 5.664457 | GGATCCCCTAAAAGTTAGTGGAGTA | 59.336 | 44.000 | 0.00 | 0.00 | 0.00 | 2.59 |
72 | 73 | 4.473922 | GGATCCCCTAAAAGTTAGTGGAGT | 59.526 | 45.833 | 0.00 | 0.00 | 0.00 | 3.85 |
73 | 74 | 4.443034 | CGGATCCCCTAAAAGTTAGTGGAG | 60.443 | 50.000 | 6.06 | 0.00 | 0.00 | 3.86 |
74 | 75 | 3.453353 | CGGATCCCCTAAAAGTTAGTGGA | 59.547 | 47.826 | 6.06 | 2.31 | 0.00 | 4.02 |
75 | 76 | 3.199289 | ACGGATCCCCTAAAAGTTAGTGG | 59.801 | 47.826 | 6.06 | 0.00 | 0.00 | 4.00 |
76 | 77 | 4.482952 | ACGGATCCCCTAAAAGTTAGTG | 57.517 | 45.455 | 6.06 | 0.00 | 0.00 | 2.74 |
77 | 78 | 6.625532 | TTAACGGATCCCCTAAAAGTTAGT | 57.374 | 37.500 | 6.06 | 0.00 | 0.00 | 2.24 |
78 | 79 | 8.515695 | AATTTAACGGATCCCCTAAAAGTTAG | 57.484 | 34.615 | 6.06 | 0.00 | 0.00 | 2.34 |
79 | 80 | 8.741841 | CAAATTTAACGGATCCCCTAAAAGTTA | 58.258 | 33.333 | 6.06 | 4.18 | 0.00 | 2.24 |
80 | 81 | 7.233962 | ACAAATTTAACGGATCCCCTAAAAGTT | 59.766 | 33.333 | 6.06 | 5.20 | 0.00 | 2.66 |
81 | 82 | 6.722590 | ACAAATTTAACGGATCCCCTAAAAGT | 59.277 | 34.615 | 6.06 | 7.94 | 0.00 | 2.66 |
82 | 83 | 7.165460 | ACAAATTTAACGGATCCCCTAAAAG | 57.835 | 36.000 | 6.06 | 7.41 | 0.00 | 2.27 |
83 | 84 | 6.153170 | GGACAAATTTAACGGATCCCCTAAAA | 59.847 | 38.462 | 6.06 | 2.55 | 0.00 | 1.52 |
84 | 85 | 5.653330 | GGACAAATTTAACGGATCCCCTAAA | 59.347 | 40.000 | 6.06 | 10.41 | 0.00 | 1.85 |
85 | 86 | 5.044698 | AGGACAAATTTAACGGATCCCCTAA | 60.045 | 40.000 | 6.06 | 0.95 | 0.00 | 2.69 |
86 | 87 | 4.475747 | AGGACAAATTTAACGGATCCCCTA | 59.524 | 41.667 | 6.06 | 0.00 | 0.00 | 3.53 |
87 | 88 | 3.268595 | AGGACAAATTTAACGGATCCCCT | 59.731 | 43.478 | 6.06 | 0.00 | 0.00 | 4.79 |
88 | 89 | 3.628008 | AGGACAAATTTAACGGATCCCC | 58.372 | 45.455 | 6.06 | 0.00 | 0.00 | 4.81 |
89 | 90 | 4.266714 | TGAGGACAAATTTAACGGATCCC | 58.733 | 43.478 | 6.06 | 0.00 | 0.00 | 3.85 |
90 | 91 | 4.201920 | GCTGAGGACAAATTTAACGGATCC | 60.202 | 45.833 | 0.00 | 0.00 | 0.00 | 3.36 |
91 | 92 | 4.636206 | AGCTGAGGACAAATTTAACGGATC | 59.364 | 41.667 | 0.00 | 0.00 | 0.00 | 3.36 |
92 | 93 | 4.396166 | CAGCTGAGGACAAATTTAACGGAT | 59.604 | 41.667 | 8.42 | 0.00 | 0.00 | 4.18 |
93 | 94 | 3.751175 | CAGCTGAGGACAAATTTAACGGA | 59.249 | 43.478 | 8.42 | 0.00 | 0.00 | 4.69 |
94 | 95 | 3.119849 | CCAGCTGAGGACAAATTTAACGG | 60.120 | 47.826 | 17.39 | 0.00 | 0.00 | 4.44 |
95 | 96 | 3.670627 | GCCAGCTGAGGACAAATTTAACG | 60.671 | 47.826 | 17.39 | 0.00 | 0.00 | 3.18 |
96 | 97 | 3.507622 | AGCCAGCTGAGGACAAATTTAAC | 59.492 | 43.478 | 17.39 | 0.00 | 0.00 | 2.01 |
97 | 98 | 3.766545 | AGCCAGCTGAGGACAAATTTAA | 58.233 | 40.909 | 17.39 | 0.00 | 0.00 | 1.52 |
98 | 99 | 3.439857 | AGCCAGCTGAGGACAAATTTA | 57.560 | 42.857 | 17.39 | 0.00 | 0.00 | 1.40 |
99 | 100 | 2.299326 | AGCCAGCTGAGGACAAATTT | 57.701 | 45.000 | 17.39 | 0.00 | 0.00 | 1.82 |
100 | 101 | 2.165998 | GAAGCCAGCTGAGGACAAATT | 58.834 | 47.619 | 17.39 | 0.00 | 0.00 | 1.82 |
101 | 102 | 1.074405 | TGAAGCCAGCTGAGGACAAAT | 59.926 | 47.619 | 17.39 | 0.00 | 0.00 | 2.32 |
102 | 103 | 0.473755 | TGAAGCCAGCTGAGGACAAA | 59.526 | 50.000 | 17.39 | 0.00 | 0.00 | 2.83 |
103 | 104 | 0.035881 | CTGAAGCCAGCTGAGGACAA | 59.964 | 55.000 | 17.39 | 0.00 | 33.07 | 3.18 |
104 | 105 | 0.833409 | TCTGAAGCCAGCTGAGGACA | 60.833 | 55.000 | 17.39 | 9.16 | 40.20 | 4.02 |
105 | 106 | 0.322975 | TTCTGAAGCCAGCTGAGGAC | 59.677 | 55.000 | 17.39 | 4.67 | 40.20 | 3.85 |
106 | 107 | 1.059098 | TTTCTGAAGCCAGCTGAGGA | 58.941 | 50.000 | 17.39 | 0.00 | 40.20 | 3.71 |
107 | 108 | 1.538950 | GTTTTCTGAAGCCAGCTGAGG | 59.461 | 52.381 | 17.39 | 0.00 | 40.20 | 3.86 |
108 | 109 | 2.224606 | TGTTTTCTGAAGCCAGCTGAG | 58.775 | 47.619 | 17.39 | 6.56 | 40.20 | 3.35 |
109 | 110 | 2.346766 | TGTTTTCTGAAGCCAGCTGA | 57.653 | 45.000 | 17.39 | 0.00 | 40.20 | 4.26 |
110 | 111 | 3.314553 | CAATGTTTTCTGAAGCCAGCTG | 58.685 | 45.455 | 6.78 | 6.78 | 40.20 | 4.24 |
111 | 112 | 2.288640 | GCAATGTTTTCTGAAGCCAGCT | 60.289 | 45.455 | 0.00 | 0.00 | 40.20 | 4.24 |
112 | 113 | 2.064014 | GCAATGTTTTCTGAAGCCAGC | 58.936 | 47.619 | 0.00 | 0.00 | 40.20 | 4.85 |
113 | 114 | 2.322161 | CGCAATGTTTTCTGAAGCCAG | 58.678 | 47.619 | 0.00 | 0.00 | 41.74 | 4.85 |
114 | 115 | 1.602668 | GCGCAATGTTTTCTGAAGCCA | 60.603 | 47.619 | 0.30 | 0.00 | 0.00 | 4.75 |
115 | 116 | 1.063031 | GCGCAATGTTTTCTGAAGCC | 58.937 | 50.000 | 0.30 | 0.00 | 0.00 | 4.35 |
116 | 117 | 2.056094 | AGCGCAATGTTTTCTGAAGC | 57.944 | 45.000 | 11.47 | 0.00 | 0.00 | 3.86 |
117 | 118 | 2.653584 | CGAAGCGCAATGTTTTCTGAAG | 59.346 | 45.455 | 11.47 | 0.00 | 0.00 | 3.02 |
118 | 119 | 2.604373 | CCGAAGCGCAATGTTTTCTGAA | 60.604 | 45.455 | 11.47 | 0.00 | 0.00 | 3.02 |
119 | 120 | 1.069296 | CCGAAGCGCAATGTTTTCTGA | 60.069 | 47.619 | 11.47 | 0.00 | 0.00 | 3.27 |
120 | 121 | 1.330306 | CCGAAGCGCAATGTTTTCTG | 58.670 | 50.000 | 11.47 | 0.00 | 0.00 | 3.02 |
121 | 122 | 0.951558 | ACCGAAGCGCAATGTTTTCT | 59.048 | 45.000 | 11.47 | 0.00 | 0.00 | 2.52 |
122 | 123 | 1.713932 | GAACCGAAGCGCAATGTTTTC | 59.286 | 47.619 | 11.47 | 1.92 | 0.00 | 2.29 |
123 | 124 | 1.066303 | TGAACCGAAGCGCAATGTTTT | 59.934 | 42.857 | 11.47 | 0.00 | 0.00 | 2.43 |
124 | 125 | 0.665835 | TGAACCGAAGCGCAATGTTT | 59.334 | 45.000 | 11.47 | 0.00 | 0.00 | 2.83 |
125 | 126 | 0.238289 | CTGAACCGAAGCGCAATGTT | 59.762 | 50.000 | 11.47 | 7.29 | 0.00 | 2.71 |
126 | 127 | 0.602638 | TCTGAACCGAAGCGCAATGT | 60.603 | 50.000 | 11.47 | 0.00 | 0.00 | 2.71 |
127 | 128 | 0.516877 | TTCTGAACCGAAGCGCAATG | 59.483 | 50.000 | 11.47 | 0.00 | 0.00 | 2.82 |
128 | 129 | 1.234821 | TTTCTGAACCGAAGCGCAAT | 58.765 | 45.000 | 11.47 | 0.00 | 0.00 | 3.56 |
129 | 130 | 1.196808 | GATTTCTGAACCGAAGCGCAA | 59.803 | 47.619 | 11.47 | 0.00 | 0.00 | 4.85 |
130 | 131 | 0.796312 | GATTTCTGAACCGAAGCGCA | 59.204 | 50.000 | 11.47 | 0.00 | 0.00 | 6.09 |
131 | 132 | 0.796312 | TGATTTCTGAACCGAAGCGC | 59.204 | 50.000 | 0.00 | 0.00 | 0.00 | 5.92 |
132 | 133 | 2.337583 | TCTGATTTCTGAACCGAAGCG | 58.662 | 47.619 | 0.00 | 0.00 | 0.00 | 4.68 |
185 | 186 | 9.472361 | GTCATGATCAGGGATTTTCATATTTTG | 57.528 | 33.333 | 7.64 | 0.00 | 0.00 | 2.44 |
190 | 191 | 5.928976 | ACGTCATGATCAGGGATTTTCATA | 58.071 | 37.500 | 7.64 | 0.00 | 0.00 | 2.15 |
200 | 201 | 4.222886 | GTTAGATCGACGTCATGATCAGG | 58.777 | 47.826 | 25.59 | 0.00 | 42.72 | 3.86 |
213 | 214 | 2.159490 | TCGCGACATGTTGTTAGATCGA | 60.159 | 45.455 | 14.64 | 10.43 | 0.00 | 3.59 |
214 | 215 | 2.182014 | TCGCGACATGTTGTTAGATCG | 58.818 | 47.619 | 14.64 | 8.33 | 0.00 | 3.69 |
215 | 216 | 3.551890 | ACATCGCGACATGTTGTTAGATC | 59.448 | 43.478 | 12.93 | 0.00 | 32.81 | 2.75 |
216 | 217 | 3.521560 | ACATCGCGACATGTTGTTAGAT | 58.478 | 40.909 | 12.93 | 13.18 | 32.81 | 1.98 |
217 | 218 | 2.921121 | GACATCGCGACATGTTGTTAGA | 59.079 | 45.455 | 12.93 | 11.63 | 37.11 | 2.10 |
218 | 219 | 2.923655 | AGACATCGCGACATGTTGTTAG | 59.076 | 45.455 | 12.93 | 6.93 | 37.11 | 2.34 |
219 | 220 | 2.921121 | GAGACATCGCGACATGTTGTTA | 59.079 | 45.455 | 12.93 | 3.68 | 37.11 | 2.41 |
220 | 221 | 1.726791 | GAGACATCGCGACATGTTGTT | 59.273 | 47.619 | 12.93 | 3.05 | 37.11 | 2.83 |
221 | 222 | 1.336795 | TGAGACATCGCGACATGTTGT | 60.337 | 47.619 | 12.93 | 12.25 | 37.11 | 3.32 |
222 | 223 | 1.349234 | TGAGACATCGCGACATGTTG | 58.651 | 50.000 | 12.93 | 8.26 | 37.11 | 3.33 |
223 | 224 | 2.078849 | TTGAGACATCGCGACATGTT | 57.921 | 45.000 | 12.93 | 4.12 | 37.11 | 2.71 |
224 | 225 | 1.929169 | CATTGAGACATCGCGACATGT | 59.071 | 47.619 | 12.93 | 14.06 | 39.84 | 3.21 |
257 | 258 | 5.284864 | TGTAGTACTAGTACGTCTGATCGG | 58.715 | 45.833 | 23.87 | 0.00 | 40.80 | 4.18 |
258 | 259 | 7.201224 | CGTATGTAGTACTAGTACGTCTGATCG | 60.201 | 44.444 | 25.33 | 19.27 | 40.80 | 3.69 |
259 | 260 | 7.805542 | TCGTATGTAGTACTAGTACGTCTGATC | 59.194 | 40.741 | 28.74 | 13.44 | 40.80 | 2.92 |
401 | 429 | 1.874320 | GCTGTAGGCGATAAGAAGGGC | 60.874 | 57.143 | 0.00 | 0.00 | 0.00 | 5.19 |
443 | 471 | 2.335369 | CTAATCGGGACCGGAGCG | 59.665 | 66.667 | 9.46 | 0.00 | 40.25 | 5.03 |
444 | 472 | 2.029221 | GCTAATCGGGACCGGAGC | 59.971 | 66.667 | 9.46 | 13.06 | 40.25 | 4.70 |
445 | 473 | 1.364171 | CTGCTAATCGGGACCGGAG | 59.636 | 63.158 | 9.46 | 7.30 | 40.25 | 4.63 |
446 | 474 | 2.792947 | GCTGCTAATCGGGACCGGA | 61.793 | 63.158 | 9.46 | 3.95 | 40.25 | 5.14 |
447 | 475 | 2.280186 | GCTGCTAATCGGGACCGG | 60.280 | 66.667 | 11.27 | 0.00 | 40.25 | 5.28 |
448 | 476 | 2.280186 | GGCTGCTAATCGGGACCG | 60.280 | 66.667 | 3.96 | 3.96 | 41.35 | 4.79 |
449 | 477 | 2.280186 | CGGCTGCTAATCGGGACC | 60.280 | 66.667 | 0.00 | 0.00 | 0.00 | 4.46 |
450 | 478 | 2.967615 | GCGGCTGCTAATCGGGAC | 60.968 | 66.667 | 11.21 | 0.00 | 38.39 | 4.46 |
451 | 479 | 4.585526 | CGCGGCTGCTAATCGGGA | 62.586 | 66.667 | 17.03 | 0.00 | 39.65 | 5.14 |
452 | 480 | 4.891727 | ACGCGGCTGCTAATCGGG | 62.892 | 66.667 | 17.03 | 10.49 | 41.51 | 5.14 |
453 | 481 | 3.330853 | GACGCGGCTGCTAATCGG | 61.331 | 66.667 | 17.03 | 0.55 | 39.65 | 4.18 |
454 | 482 | 1.951130 | ATGACGCGGCTGCTAATCG | 60.951 | 57.895 | 15.80 | 1.37 | 39.65 | 3.34 |
455 | 483 | 1.566563 | CATGACGCGGCTGCTAATC | 59.433 | 57.895 | 15.80 | 10.90 | 39.65 | 1.75 |
456 | 484 | 1.889105 | CCATGACGCGGCTGCTAAT | 60.889 | 57.895 | 15.80 | 3.20 | 39.65 | 1.73 |
457 | 485 | 2.310327 | ATCCATGACGCGGCTGCTAA | 62.310 | 55.000 | 15.80 | 0.53 | 39.65 | 3.09 |
458 | 486 | 2.796193 | ATCCATGACGCGGCTGCTA | 61.796 | 57.895 | 15.80 | 1.90 | 39.65 | 3.49 |
462 | 490 | 1.596203 | CATCATCCATGACGCGGCT | 60.596 | 57.895 | 15.80 | 0.00 | 40.03 | 5.52 |
464 | 492 | 0.530431 | TCACATCATCCATGACGCGG | 60.530 | 55.000 | 12.47 | 0.00 | 40.03 | 6.46 |
481 | 509 | 3.410628 | AGGTGCGGCCATCCATCA | 61.411 | 61.111 | 2.24 | 0.00 | 40.61 | 3.07 |
518 | 546 | 2.269172 | GGTAGTTGGCGAGTAAAGAGC | 58.731 | 52.381 | 0.00 | 0.00 | 0.00 | 4.09 |
519 | 547 | 2.734492 | CGGGTAGTTGGCGAGTAAAGAG | 60.734 | 54.545 | 0.00 | 0.00 | 0.00 | 2.85 |
611 | 660 | 3.649096 | CGTTCACGCCATTGGTGA | 58.351 | 55.556 | 22.75 | 7.56 | 42.31 | 4.02 |
649 | 728 | 1.172180 | TTCTTTTCGCTGTGGGCTGG | 61.172 | 55.000 | 0.00 | 0.00 | 39.13 | 4.85 |
650 | 729 | 0.239347 | CTTCTTTTCGCTGTGGGCTG | 59.761 | 55.000 | 0.00 | 0.00 | 39.13 | 4.85 |
651 | 730 | 0.179018 | ACTTCTTTTCGCTGTGGGCT | 60.179 | 50.000 | 0.00 | 0.00 | 39.13 | 5.19 |
652 | 731 | 0.668535 | AACTTCTTTTCGCTGTGGGC | 59.331 | 50.000 | 0.00 | 0.00 | 37.64 | 5.36 |
653 | 732 | 2.357637 | TCAAACTTCTTTTCGCTGTGGG | 59.642 | 45.455 | 0.00 | 0.00 | 0.00 | 4.61 |
654 | 733 | 3.691049 | TCAAACTTCTTTTCGCTGTGG | 57.309 | 42.857 | 0.00 | 0.00 | 0.00 | 4.17 |
655 | 734 | 3.791353 | GGTTCAAACTTCTTTTCGCTGTG | 59.209 | 43.478 | 0.00 | 0.00 | 0.00 | 3.66 |
656 | 735 | 3.181490 | GGGTTCAAACTTCTTTTCGCTGT | 60.181 | 43.478 | 0.00 | 0.00 | 0.00 | 4.40 |
687 | 766 | 1.309499 | CCGCGCTTTTACCATTCCCA | 61.309 | 55.000 | 5.56 | 0.00 | 0.00 | 4.37 |
737 | 816 | 3.876274 | AGCTTCTTGATCTCGTTGCTA | 57.124 | 42.857 | 0.00 | 0.00 | 0.00 | 3.49 |
738 | 817 | 2.758736 | AGCTTCTTGATCTCGTTGCT | 57.241 | 45.000 | 0.00 | 0.00 | 0.00 | 3.91 |
739 | 818 | 2.738846 | TGAAGCTTCTTGATCTCGTTGC | 59.261 | 45.455 | 26.09 | 0.00 | 0.00 | 4.17 |
740 | 819 | 3.742882 | TGTGAAGCTTCTTGATCTCGTTG | 59.257 | 43.478 | 26.09 | 0.00 | 0.00 | 4.10 |
741 | 820 | 3.743396 | GTGTGAAGCTTCTTGATCTCGTT | 59.257 | 43.478 | 26.09 | 0.00 | 0.00 | 3.85 |
742 | 821 | 3.321497 | GTGTGAAGCTTCTTGATCTCGT | 58.679 | 45.455 | 26.09 | 0.00 | 0.00 | 4.18 |
743 | 822 | 2.343843 | CGTGTGAAGCTTCTTGATCTCG | 59.656 | 50.000 | 26.09 | 17.38 | 0.00 | 4.04 |
744 | 823 | 3.321497 | ACGTGTGAAGCTTCTTGATCTC | 58.679 | 45.455 | 26.09 | 11.33 | 0.00 | 2.75 |
770 | 849 | 7.639113 | ACTCTGTTATCTTTTGTTTTGTGGA | 57.361 | 32.000 | 0.00 | 0.00 | 0.00 | 4.02 |
773 | 852 | 7.012044 | ACGCTACTCTGTTATCTTTTGTTTTGT | 59.988 | 33.333 | 0.00 | 0.00 | 0.00 | 2.83 |
774 | 853 | 7.352739 | ACGCTACTCTGTTATCTTTTGTTTTG | 58.647 | 34.615 | 0.00 | 0.00 | 0.00 | 2.44 |
777 | 856 | 6.310711 | GCTACGCTACTCTGTTATCTTTTGTT | 59.689 | 38.462 | 0.00 | 0.00 | 0.00 | 2.83 |
779 | 858 | 6.037098 | AGCTACGCTACTCTGTTATCTTTTG | 58.963 | 40.000 | 0.00 | 0.00 | 36.99 | 2.44 |
780 | 859 | 6.210287 | AGCTACGCTACTCTGTTATCTTTT | 57.790 | 37.500 | 0.00 | 0.00 | 36.99 | 2.27 |
781 | 860 | 5.838531 | AGCTACGCTACTCTGTTATCTTT | 57.161 | 39.130 | 0.00 | 0.00 | 36.99 | 2.52 |
791 | 870 | 2.943449 | AGGTTGAAGCTACGCTACTC | 57.057 | 50.000 | 0.00 | 0.00 | 38.25 | 2.59 |
795 | 874 | 1.542915 | TCGTAAGGTTGAAGCTACGCT | 59.457 | 47.619 | 16.00 | 0.00 | 38.35 | 5.07 |
796 | 875 | 1.652619 | GTCGTAAGGTTGAAGCTACGC | 59.347 | 52.381 | 16.00 | 10.56 | 38.47 | 4.42 |
797 | 876 | 2.257034 | GGTCGTAAGGTTGAAGCTACG | 58.743 | 52.381 | 15.20 | 15.20 | 38.47 | 3.51 |
798 | 877 | 2.095059 | TCGGTCGTAAGGTTGAAGCTAC | 60.095 | 50.000 | 0.00 | 0.00 | 38.47 | 3.58 |
799 | 878 | 2.161855 | TCGGTCGTAAGGTTGAAGCTA | 58.838 | 47.619 | 0.00 | 0.00 | 38.47 | 3.32 |
800 | 879 | 0.963962 | TCGGTCGTAAGGTTGAAGCT | 59.036 | 50.000 | 0.00 | 0.00 | 38.47 | 3.74 |
872 | 951 | 4.612412 | TCGTCGGTTGGTGGGTGC | 62.612 | 66.667 | 0.00 | 0.00 | 0.00 | 5.01 |
910 | 989 | 2.710902 | GGGATGCGGTTTTGGAGGC | 61.711 | 63.158 | 0.00 | 0.00 | 0.00 | 4.70 |
1110 | 1201 | 2.993264 | TCCGGGTCGTCCTTGGAC | 60.993 | 66.667 | 9.62 | 9.62 | 34.85 | 4.02 |
2019 | 2110 | 1.302192 | GGGTCAGCCAAGCGTAACA | 60.302 | 57.895 | 0.00 | 0.00 | 36.17 | 2.41 |
2053 | 2144 | 4.201783 | ACCAGCGTGCGAATTAATTTAGAC | 60.202 | 41.667 | 1.43 | 0.00 | 0.00 | 2.59 |
2054 | 2145 | 3.936453 | ACCAGCGTGCGAATTAATTTAGA | 59.064 | 39.130 | 1.43 | 0.00 | 0.00 | 2.10 |
2055 | 2146 | 4.273005 | ACCAGCGTGCGAATTAATTTAG | 57.727 | 40.909 | 1.43 | 1.53 | 0.00 | 1.85 |
2057 | 2148 | 4.688511 | TTACCAGCGTGCGAATTAATTT | 57.311 | 36.364 | 1.43 | 0.00 | 0.00 | 1.82 |
2066 | 2160 | 0.928229 | GGAAGTATTACCAGCGTGCG | 59.072 | 55.000 | 0.00 | 0.00 | 0.00 | 5.34 |
2085 | 2181 | 1.395954 | CATCAGCTGATCACCAACACG | 59.604 | 52.381 | 26.44 | 8.30 | 31.21 | 4.49 |
2092 | 2188 | 6.363626 | CGGTAGTATTTACATCAGCTGATCAC | 59.636 | 42.308 | 26.44 | 15.66 | 31.21 | 3.06 |
2108 | 2204 | 9.892130 | ACACTACTACTAAAGTACGGTAGTATT | 57.108 | 33.333 | 20.25 | 15.93 | 43.49 | 1.89 |
2131 | 2227 | 6.255020 | CCTCGAATAACCATTAGTGTACACAC | 59.745 | 42.308 | 27.06 | 4.51 | 46.77 | 3.82 |
2133 | 2229 | 6.567050 | TCCTCGAATAACCATTAGTGTACAC | 58.433 | 40.000 | 18.56 | 18.56 | 0.00 | 2.90 |
2134 | 2230 | 6.604396 | TCTCCTCGAATAACCATTAGTGTACA | 59.396 | 38.462 | 0.00 | 0.00 | 0.00 | 2.90 |
2171 | 2267 | 7.523293 | TCAGTTTCTCAAATTTCCTGCATAA | 57.477 | 32.000 | 0.00 | 0.00 | 0.00 | 1.90 |
2173 | 2269 | 6.600882 | ATCAGTTTCTCAAATTTCCTGCAT | 57.399 | 33.333 | 0.00 | 0.00 | 0.00 | 3.96 |
2174 | 2270 | 6.409524 | AATCAGTTTCTCAAATTTCCTGCA | 57.590 | 33.333 | 0.00 | 0.00 | 0.00 | 4.41 |
2175 | 2271 | 6.925165 | TGAAATCAGTTTCTCAAATTTCCTGC | 59.075 | 34.615 | 0.00 | 0.00 | 43.30 | 4.85 |
2232 | 2332 | 9.784531 | AGATCAGAAGTTTCTCTCACAAAAATA | 57.215 | 29.630 | 0.00 | 0.00 | 34.74 | 1.40 |
2233 | 2333 | 8.688747 | AGATCAGAAGTTTCTCTCACAAAAAT | 57.311 | 30.769 | 0.00 | 0.00 | 34.74 | 1.82 |
2238 | 2338 | 8.815565 | ATAGTAGATCAGAAGTTTCTCTCACA | 57.184 | 34.615 | 0.00 | 0.00 | 34.74 | 3.58 |
2276 | 2376 | 5.414765 | CCAGTTACCCTGAAATTTACCAGAC | 59.585 | 44.000 | 8.15 | 0.24 | 44.49 | 3.51 |
2293 | 2393 | 8.845942 | ACTAATTCGTTTTTGAAACCAGTTAC | 57.154 | 30.769 | 0.00 | 0.00 | 0.00 | 2.50 |
2294 | 2394 | 9.934190 | GTACTAATTCGTTTTTGAAACCAGTTA | 57.066 | 29.630 | 0.00 | 0.00 | 0.00 | 2.24 |
2304 | 2404 | 9.403869 | GCAAAACAAAGTACTAATTCGTTTTTG | 57.596 | 29.630 | 13.59 | 13.50 | 33.99 | 2.44 |
2309 | 2409 | 7.023197 | ACTGCAAAACAAAGTACTAATTCGT | 57.977 | 32.000 | 0.00 | 0.00 | 0.00 | 3.85 |
2314 | 2414 | 7.711772 | TGCTACTACTGCAAAACAAAGTACTAA | 59.288 | 33.333 | 0.00 | 0.00 | 37.51 | 2.24 |
2317 | 2417 | 6.295039 | TGCTACTACTGCAAAACAAAGTAC | 57.705 | 37.500 | 0.00 | 0.00 | 37.51 | 2.73 |
2319 | 2419 | 6.391227 | AATGCTACTACTGCAAAACAAAGT | 57.609 | 33.333 | 0.00 | 0.00 | 44.01 | 2.66 |
2320 | 2420 | 8.023128 | ACATAATGCTACTACTGCAAAACAAAG | 58.977 | 33.333 | 0.00 | 0.00 | 44.01 | 2.77 |
2321 | 2421 | 7.881142 | ACATAATGCTACTACTGCAAAACAAA | 58.119 | 30.769 | 0.00 | 0.00 | 44.01 | 2.83 |
2324 | 2424 | 7.481798 | GTCAACATAATGCTACTACTGCAAAAC | 59.518 | 37.037 | 0.00 | 0.00 | 44.01 | 2.43 |
2325 | 2425 | 7.390440 | AGTCAACATAATGCTACTACTGCAAAA | 59.610 | 33.333 | 0.00 | 0.00 | 44.01 | 2.44 |
2329 | 2429 | 5.174035 | CGAGTCAACATAATGCTACTACTGC | 59.826 | 44.000 | 0.00 | 0.00 | 0.00 | 4.40 |
2330 | 2430 | 6.197282 | CACGAGTCAACATAATGCTACTACTG | 59.803 | 42.308 | 0.00 | 0.00 | 0.00 | 2.74 |
2332 | 2432 | 5.459107 | CCACGAGTCAACATAATGCTACTAC | 59.541 | 44.000 | 0.00 | 0.00 | 0.00 | 2.73 |
2388 | 2605 | 2.095919 | GCGTCGTTTCCAAGCTGTAATT | 60.096 | 45.455 | 0.00 | 0.00 | 0.00 | 1.40 |
2430 | 2647 | 3.270877 | GTCGGCTTGGTCAAATCATACT | 58.729 | 45.455 | 0.00 | 0.00 | 0.00 | 2.12 |
2434 | 2651 | 0.109532 | TGGTCGGCTTGGTCAAATCA | 59.890 | 50.000 | 0.00 | 0.00 | 0.00 | 2.57 |
2450 | 2667 | 2.761208 | CTCTCCCTAAAGTCGTGATGGT | 59.239 | 50.000 | 0.00 | 0.00 | 0.00 | 3.55 |
2451 | 2668 | 2.482142 | GCTCTCCCTAAAGTCGTGATGG | 60.482 | 54.545 | 0.00 | 0.00 | 0.00 | 3.51 |
2452 | 2669 | 2.482142 | GGCTCTCCCTAAAGTCGTGATG | 60.482 | 54.545 | 0.00 | 0.00 | 0.00 | 3.07 |
2453 | 2670 | 1.757699 | GGCTCTCCCTAAAGTCGTGAT | 59.242 | 52.381 | 0.00 | 0.00 | 0.00 | 3.06 |
2454 | 2671 | 1.183549 | GGCTCTCCCTAAAGTCGTGA | 58.816 | 55.000 | 0.00 | 0.00 | 0.00 | 4.35 |
2455 | 2672 | 0.179134 | CGGCTCTCCCTAAAGTCGTG | 60.179 | 60.000 | 0.00 | 0.00 | 35.95 | 4.35 |
2456 | 2673 | 2.190756 | CGGCTCTCCCTAAAGTCGT | 58.809 | 57.895 | 0.00 | 0.00 | 35.95 | 4.34 |
2457 | 2674 | 1.386533 | TACGGCTCTCCCTAAAGTCG | 58.613 | 55.000 | 0.00 | 0.00 | 45.67 | 4.18 |
2458 | 2675 | 2.957006 | TCATACGGCTCTCCCTAAAGTC | 59.043 | 50.000 | 0.00 | 0.00 | 0.00 | 3.01 |
2459 | 2676 | 3.028094 | TCATACGGCTCTCCCTAAAGT | 57.972 | 47.619 | 0.00 | 0.00 | 0.00 | 2.66 |
2460 | 2677 | 4.608948 | AATCATACGGCTCTCCCTAAAG | 57.391 | 45.455 | 0.00 | 0.00 | 0.00 | 1.85 |
2461 | 2678 | 4.202326 | GGAAATCATACGGCTCTCCCTAAA | 60.202 | 45.833 | 0.00 | 0.00 | 0.00 | 1.85 |
2462 | 2679 | 3.323979 | GGAAATCATACGGCTCTCCCTAA | 59.676 | 47.826 | 0.00 | 0.00 | 0.00 | 2.69 |
2463 | 2680 | 2.897969 | GGAAATCATACGGCTCTCCCTA | 59.102 | 50.000 | 0.00 | 0.00 | 0.00 | 3.53 |
2464 | 2681 | 1.694696 | GGAAATCATACGGCTCTCCCT | 59.305 | 52.381 | 0.00 | 0.00 | 0.00 | 4.20 |
2465 | 2682 | 1.694696 | AGGAAATCATACGGCTCTCCC | 59.305 | 52.381 | 0.00 | 0.00 | 0.00 | 4.30 |
2466 | 2683 | 2.548920 | CCAGGAAATCATACGGCTCTCC | 60.549 | 54.545 | 0.00 | 0.00 | 0.00 | 3.71 |
2467 | 2684 | 2.760374 | CCAGGAAATCATACGGCTCTC | 58.240 | 52.381 | 0.00 | 0.00 | 0.00 | 3.20 |
2468 | 2685 | 1.202698 | GCCAGGAAATCATACGGCTCT | 60.203 | 52.381 | 0.00 | 0.00 | 36.58 | 4.09 |
2469 | 2686 | 1.230324 | GCCAGGAAATCATACGGCTC | 58.770 | 55.000 | 0.00 | 0.00 | 36.58 | 4.70 |
2470 | 2687 | 0.546122 | TGCCAGGAAATCATACGGCT | 59.454 | 50.000 | 0.00 | 0.00 | 40.27 | 5.52 |
2471 | 2688 | 1.537202 | GATGCCAGGAAATCATACGGC | 59.463 | 52.381 | 0.00 | 0.00 | 40.02 | 5.68 |
2472 | 2689 | 2.849942 | TGATGCCAGGAAATCATACGG | 58.150 | 47.619 | 0.00 | 0.00 | 0.00 | 4.02 |
2473 | 2690 | 3.365666 | GCATGATGCCAGGAAATCATACG | 60.366 | 47.826 | 6.04 | 7.66 | 40.68 | 3.06 |
2474 | 2691 | 4.170292 | GCATGATGCCAGGAAATCATAC | 57.830 | 45.455 | 6.04 | 8.27 | 40.68 | 2.39 |
2496 | 2713 | 1.735386 | AGCATGTCTGTTAGCAGCTG | 58.265 | 50.000 | 10.11 | 10.11 | 42.29 | 4.24 |
2505 | 2722 | 1.550524 | ACACCACGATAGCATGTCTGT | 59.449 | 47.619 | 0.00 | 0.00 | 42.67 | 3.41 |
2506 | 2723 | 2.299993 | ACACCACGATAGCATGTCTG | 57.700 | 50.000 | 0.00 | 0.00 | 42.67 | 3.51 |
2507 | 2724 | 3.384789 | ACATACACCACGATAGCATGTCT | 59.615 | 43.478 | 0.00 | 0.00 | 42.67 | 3.41 |
2549 | 3079 | 5.060506 | TGGAATTAGCGAACAGTTCTCAAA | 58.939 | 37.500 | 11.60 | 3.14 | 0.00 | 2.69 |
2554 | 3084 | 5.516090 | TGTTTTGGAATTAGCGAACAGTTC | 58.484 | 37.500 | 2.85 | 2.85 | 0.00 | 3.01 |
2557 | 3087 | 5.460646 | ACATGTTTTGGAATTAGCGAACAG | 58.539 | 37.500 | 0.00 | 0.00 | 31.47 | 3.16 |
2594 | 4393 | 8.238631 | TGAACATTGTATGAACTCATGAACATG | 58.761 | 33.333 | 15.39 | 8.31 | 37.15 | 3.21 |
2602 | 4401 | 7.581213 | AAAAGGTGAACATTGTATGAACTCA | 57.419 | 32.000 | 0.00 | 0.00 | 0.00 | 3.41 |
2612 | 4411 | 9.701355 | GACATGTTTTTAAAAAGGTGAACATTG | 57.299 | 29.630 | 22.40 | 14.67 | 36.04 | 2.82 |
2616 | 4415 | 8.696410 | TGAGACATGTTTTTAAAAAGGTGAAC | 57.304 | 30.769 | 22.40 | 17.09 | 0.00 | 3.18 |
2626 | 4426 | 7.142680 | GGTCGGATTTTGAGACATGTTTTTAA | 58.857 | 34.615 | 0.00 | 0.00 | 36.68 | 1.52 |
2638 | 4438 | 3.004734 | AGCACTTTTGGTCGGATTTTGAG | 59.995 | 43.478 | 0.00 | 0.00 | 0.00 | 3.02 |
2644 | 4444 | 5.722021 | AATTTTAGCACTTTTGGTCGGAT | 57.278 | 34.783 | 0.00 | 0.00 | 34.50 | 4.18 |
2648 | 4448 | 8.884726 | TGGTTTTAAATTTTAGCACTTTTGGTC | 58.115 | 29.630 | 0.00 | 0.00 | 34.50 | 4.02 |
2650 | 4450 | 8.888716 | AGTGGTTTTAAATTTTAGCACTTTTGG | 58.111 | 29.630 | 18.66 | 0.00 | 44.29 | 3.28 |
2685 | 4485 | 9.176460 | ACATTTCTTGAATTTGTGACCATTTTT | 57.824 | 25.926 | 0.00 | 0.00 | 0.00 | 1.94 |
2686 | 4486 | 8.735692 | ACATTTCTTGAATTTGTGACCATTTT | 57.264 | 26.923 | 0.00 | 0.00 | 0.00 | 1.82 |
2687 | 4487 | 8.735692 | AACATTTCTTGAATTTGTGACCATTT | 57.264 | 26.923 | 1.90 | 0.00 | 0.00 | 2.32 |
2688 | 4488 | 7.986320 | TGAACATTTCTTGAATTTGTGACCATT | 59.014 | 29.630 | 1.90 | 0.00 | 0.00 | 3.16 |
2689 | 4489 | 7.439056 | GTGAACATTTCTTGAATTTGTGACCAT | 59.561 | 33.333 | 1.90 | 0.00 | 0.00 | 3.55 |
2690 | 4490 | 6.756074 | GTGAACATTTCTTGAATTTGTGACCA | 59.244 | 34.615 | 1.90 | 0.00 | 0.00 | 4.02 |
2691 | 4491 | 6.200854 | GGTGAACATTTCTTGAATTTGTGACC | 59.799 | 38.462 | 9.78 | 9.78 | 0.00 | 4.02 |
2692 | 4492 | 6.756074 | TGGTGAACATTTCTTGAATTTGTGAC | 59.244 | 34.615 | 1.90 | 0.00 | 0.00 | 3.67 |
2693 | 4493 | 6.871844 | TGGTGAACATTTCTTGAATTTGTGA | 58.128 | 32.000 | 1.90 | 0.00 | 0.00 | 3.58 |
2694 | 4494 | 7.278424 | ACTTGGTGAACATTTCTTGAATTTGTG | 59.722 | 33.333 | 1.90 | 0.00 | 0.00 | 3.33 |
2695 | 4495 | 7.330262 | ACTTGGTGAACATTTCTTGAATTTGT | 58.670 | 30.769 | 0.00 | 0.00 | 0.00 | 2.83 |
2696 | 4496 | 7.492020 | TGACTTGGTGAACATTTCTTGAATTTG | 59.508 | 33.333 | 0.00 | 0.00 | 0.00 | 2.32 |
2697 | 4497 | 7.555087 | TGACTTGGTGAACATTTCTTGAATTT | 58.445 | 30.769 | 0.00 | 0.00 | 0.00 | 1.82 |
2698 | 4498 | 7.111247 | TGACTTGGTGAACATTTCTTGAATT | 57.889 | 32.000 | 0.00 | 0.00 | 0.00 | 2.17 |
2699 | 4499 | 6.713762 | TGACTTGGTGAACATTTCTTGAAT | 57.286 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
2700 | 4500 | 6.522625 | TTGACTTGGTGAACATTTCTTGAA | 57.477 | 33.333 | 0.00 | 0.00 | 0.00 | 2.69 |
2701 | 4501 | 6.522625 | TTTGACTTGGTGAACATTTCTTGA | 57.477 | 33.333 | 0.00 | 0.00 | 0.00 | 3.02 |
2702 | 4502 | 7.593875 | TTTTTGACTTGGTGAACATTTCTTG | 57.406 | 32.000 | 0.00 | 0.00 | 0.00 | 3.02 |
2801 | 4601 | 8.814931 | TCATGAATATTTGTCAAAAGTGGGAAT | 58.185 | 29.630 | 1.31 | 0.00 | 0.00 | 3.01 |
2907 | 4708 | 8.887393 | TGTTCTAGAACCTTCCCTAAACTATTT | 58.113 | 33.333 | 28.43 | 0.00 | 40.46 | 1.40 |
2910 | 4711 | 8.445361 | AATGTTCTAGAACCTTCCCTAAACTA | 57.555 | 34.615 | 28.43 | 9.12 | 40.46 | 2.24 |
2940 | 4741 | 3.181506 | CGCAGCTCTTTTATGGTCCTTTC | 60.182 | 47.826 | 0.00 | 0.00 | 0.00 | 2.62 |
2945 | 4746 | 2.289002 | CCATCGCAGCTCTTTTATGGTC | 59.711 | 50.000 | 0.00 | 0.00 | 31.28 | 4.02 |
2962 | 4763 | 1.065126 | AGTCTACTTGGGCTTGCCATC | 60.065 | 52.381 | 14.04 | 0.00 | 0.00 | 3.51 |
2968 | 4769 | 3.008049 | CCTACAACAGTCTACTTGGGCTT | 59.992 | 47.826 | 0.00 | 0.00 | 0.00 | 4.35 |
2980 | 4781 | 1.975680 | CACCACCCTACCTACAACAGT | 59.024 | 52.381 | 0.00 | 0.00 | 0.00 | 3.55 |
2981 | 4782 | 1.278127 | CCACCACCCTACCTACAACAG | 59.722 | 57.143 | 0.00 | 0.00 | 0.00 | 3.16 |
2987 | 4788 | 0.684153 | GCGTACCACCACCCTACCTA | 60.684 | 60.000 | 0.00 | 0.00 | 0.00 | 3.08 |
2988 | 4789 | 1.986210 | GCGTACCACCACCCTACCT | 60.986 | 63.158 | 0.00 | 0.00 | 0.00 | 3.08 |
2989 | 4790 | 2.580815 | GCGTACCACCACCCTACC | 59.419 | 66.667 | 0.00 | 0.00 | 0.00 | 3.18 |
2994 | 4795 | 3.039588 | CACACGCGTACCACCACC | 61.040 | 66.667 | 13.44 | 0.00 | 0.00 | 4.61 |
2995 | 4796 | 3.708734 | GCACACGCGTACCACCAC | 61.709 | 66.667 | 13.44 | 0.00 | 0.00 | 4.16 |
2996 | 4797 | 3.918977 | AGCACACGCGTACCACCA | 61.919 | 61.111 | 13.44 | 0.00 | 45.49 | 4.17 |
3004 | 4805 | 0.043053 | GTGTATATGCAGCACACGCG | 60.043 | 55.000 | 3.53 | 3.53 | 45.49 | 6.01 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.