Multiple sequence alignment - TraesCS3B01G552400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G552400 chr3B 100.000 6658 0 0 1 6658 786971941 786965284 0.000000e+00 12296.0
1 TraesCS3B01G552400 chr3B 97.345 226 6 0 6407 6632 786960605 786960380 1.050000e-102 385.0
2 TraesCS3B01G552400 chr3B 81.373 306 33 14 4670 4971 62721676 62721391 1.870000e-55 228.0
3 TraesCS3B01G552400 chr3B 83.735 166 16 5 5284 5449 550786096 550786250 5.380000e-31 147.0
4 TraesCS3B01G552400 chr3B 92.135 89 5 1 5721 5807 554699834 554699746 2.520000e-24 124.0
5 TraesCS3B01G552400 chr3B 87.912 91 10 1 4673 4763 550785608 550785697 9.130000e-19 106.0
6 TraesCS3B01G552400 chr3D 93.666 3410 139 33 2348 5730 588488263 588484904 0.000000e+00 5029.0
7 TraesCS3B01G552400 chr3D 89.233 2387 92 62 60 2349 588490630 588488312 0.000000e+00 2832.0
8 TraesCS3B01G552400 chr3D 94.808 520 20 5 5802 6321 588484907 588484395 0.000000e+00 804.0
9 TraesCS3B01G552400 chr3D 89.437 142 14 1 4670 4810 552683300 552683159 1.910000e-40 178.0
10 TraesCS3B01G552400 chr3D 78.846 260 24 21 4670 4912 583147350 583147105 5.380000e-31 147.0
11 TraesCS3B01G552400 chr3D 95.455 88 3 1 6320 6406 588484340 588484253 9.000000e-29 139.0
12 TraesCS3B01G552400 chr3D 79.902 204 21 10 3698 3888 583148545 583148349 1.510000e-26 132.0
13 TraesCS3B01G552400 chr3A 87.923 3130 236 70 2348 5422 718835799 718832757 0.000000e+00 3555.0
14 TraesCS3B01G552400 chr3A 94.181 1203 34 16 1168 2349 718837035 718835848 0.000000e+00 1801.0
15 TraesCS3B01G552400 chr3A 95.192 520 18 5 5802 6321 718832420 718831908 0.000000e+00 815.0
16 TraesCS3B01G552400 chr3A 90.625 256 6 10 321 570 718838413 718838170 2.320000e-84 324.0
17 TraesCS3B01G552400 chr3A 89.344 244 23 3 5489 5730 718832659 718832417 3.020000e-78 303.0
18 TraesCS3B01G552400 chr3A 86.916 107 2 6 60 159 718838687 718838586 7.060000e-20 110.0
19 TraesCS3B01G552400 chr3A 92.000 75 5 1 5390 5463 718832725 718832651 3.280000e-18 104.0
20 TraesCS3B01G552400 chr5B 95.294 255 8 4 6407 6658 611968011 611967758 1.040000e-107 401.0
21 TraesCS3B01G552400 chr5B 93.307 254 14 3 6406 6658 36793238 36792987 8.150000e-99 372.0
22 TraesCS3B01G552400 chr5B 93.307 254 14 3 6406 6658 36823233 36822982 8.150000e-99 372.0
23 TraesCS3B01G552400 chr5B 88.514 148 15 2 1395 1541 504307103 504306957 1.910000e-40 178.0
24 TraesCS3B01G552400 chr5B 79.327 208 29 9 3698 3899 618771214 618771413 4.190000e-27 134.0
25 TraesCS3B01G552400 chr5B 93.182 88 4 1 5718 5803 249581896 249581809 1.950000e-25 128.0
26 TraesCS3B01G552400 chr2B 93.436 259 10 6 6406 6658 42621245 42621502 1.750000e-100 377.0
27 TraesCS3B01G552400 chr2B 81.361 338 31 13 2492 2829 41328101 41328406 5.160000e-61 246.0
28 TraesCS3B01G552400 chr2B 81.364 220 31 4 5284 5502 603172199 603172409 3.190000e-38 171.0
29 TraesCS3B01G552400 chr2B 92.135 89 5 1 5718 5804 69007334 69007246 2.520000e-24 124.0
30 TraesCS3B01G552400 chr2B 98.039 51 1 0 2562 2612 62783255 62783305 9.200000e-14 89.8
31 TraesCS3B01G552400 chrUn 92.692 260 16 3 6400 6658 65837513 65837770 8.150000e-99 372.0
32 TraesCS3B01G552400 chrUn 81.311 305 33 13 4670 4971 41659089 41659372 6.720000e-55 226.0
33 TraesCS3B01G552400 chrUn 91.860 86 7 0 5722 5807 11368686 11368601 3.260000e-23 121.0
34 TraesCS3B01G552400 chrUn 91.860 86 7 0 5722 5807 345662649 345662734 3.260000e-23 121.0
35 TraesCS3B01G552400 chrUn 89.655 58 5 1 5345 5401 318194038 318193981 9.260000e-09 73.1
36 TraesCS3B01G552400 chr4B 92.885 253 16 2 6407 6658 492648915 492649166 3.790000e-97 366.0
37 TraesCS3B01G552400 chr4B 81.017 295 40 14 4675 4967 81933758 81933478 3.130000e-53 220.0
38 TraesCS3B01G552400 chr7D 95.238 231 6 5 6407 6634 631638480 631638252 1.770000e-95 361.0
39 TraesCS3B01G552400 chr7D 80.938 341 27 11 2492 2829 45485965 45485660 1.120000e-57 235.0
40 TraesCS3B01G552400 chr7D 91.558 154 13 0 1390 1543 259840852 259840699 5.230000e-51 213.0
41 TraesCS3B01G552400 chr1B 91.765 255 14 3 6407 6658 20403567 20403317 1.370000e-91 348.0
42 TraesCS3B01G552400 chr1B 77.976 168 14 6 5345 5511 102651065 102650920 4.280000e-12 84.2
43 TraesCS3B01G552400 chr1B 77.976 168 14 5 5345 5511 163674192 163674047 4.280000e-12 84.2
44 TraesCS3B01G552400 chr5A 82.738 336 23 10 2492 2825 654420156 654419854 3.960000e-67 267.0
45 TraesCS3B01G552400 chr5A 88.514 148 15 2 1395 1541 530302403 530302257 1.910000e-40 178.0
46 TraesCS3B01G552400 chr5A 92.045 88 5 1 5718 5803 295728728 295728815 9.070000e-24 122.0
47 TraesCS3B01G552400 chr1D 81.818 341 28 14 2492 2829 416536470 416536161 8.570000e-64 255.0
48 TraesCS3B01G552400 chr1D 81.065 338 33 9 2492 2829 71619281 71618975 2.400000e-59 241.0
49 TraesCS3B01G552400 chr1D 85.593 118 13 3 3696 3810 416537603 416537487 3.260000e-23 121.0
50 TraesCS3B01G552400 chr1D 89.706 68 5 1 2547 2612 416537709 416537642 1.190000e-12 86.1
51 TraesCS3B01G552400 chr1A 82.006 339 26 18 2494 2829 513850741 513850435 8.570000e-64 255.0
52 TraesCS3B01G552400 chr1A 81.308 214 21 10 3697 3899 137927382 137927587 8.940000e-34 156.0
53 TraesCS3B01G552400 chr1A 91.176 68 4 1 2547 2612 513851930 513851863 2.560000e-14 91.6
54 TraesCS3B01G552400 chr7B 81.065 338 33 9 2492 2829 2569958 2570264 2.400000e-59 241.0
55 TraesCS3B01G552400 chr7B 89.571 163 17 0 1381 1543 239362948 239363110 2.430000e-49 207.0
56 TraesCS3B01G552400 chr7B 84.343 198 23 7 1395 1585 549350839 549351035 3.170000e-43 187.0
57 TraesCS3B01G552400 chr7B 90.090 111 8 2 2488 2597 692189204 692189312 2.500000e-29 141.0
58 TraesCS3B01G552400 chr5D 81.065 338 31 15 2492 2829 125181346 125181650 8.630000e-59 239.0
59 TraesCS3B01G552400 chr5D 92.045 88 5 1 5718 5803 223299415 223299502 9.070000e-24 122.0
60 TraesCS3B01G552400 chr5D 83.621 116 13 3 3697 3809 527394008 527393896 3.280000e-18 104.0
61 TraesCS3B01G552400 chr7A 90.909 154 14 0 1390 1543 282369263 282369110 2.430000e-49 207.0
62 TraesCS3B01G552400 chr7A 84.343 198 23 7 1395 1585 591553280 591553476 3.170000e-43 187.0
63 TraesCS3B01G552400 chr6D 80.417 240 25 7 5284 5511 84292724 84292495 5.340000e-36 163.0
64 TraesCS3B01G552400 chr6D 81.221 213 23 11 3697 3899 84296245 84296040 8.940000e-34 156.0
65 TraesCS3B01G552400 chr6D 83.333 156 25 1 5284 5438 431002679 431002834 6.960000e-30 143.0
66 TraesCS3B01G552400 chr6D 95.181 83 4 0 5722 5804 144858168 144858086 1.510000e-26 132.0
67 TraesCS3B01G552400 chr4A 91.111 90 6 1 5721 5808 536208021 536207932 3.260000e-23 121.0
68 TraesCS3B01G552400 chr4A 90.541 74 7 0 3698 3771 657247238 657247165 1.530000e-16 99.0
69 TraesCS3B01G552400 chr6A 100.000 51 0 0 2562 2612 525286760 525286710 1.980000e-15 95.3
70 TraesCS3B01G552400 chr2D 91.176 68 4 1 2547 2612 34676892 34676825 2.560000e-14 91.6
71 TraesCS3B01G552400 chr2D 98.039 51 1 0 2562 2612 607796296 607796346 9.200000e-14 89.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G552400 chr3B 786965284 786971941 6657 True 12296.000000 12296 100.0000 1 6658 1 chr3B.!!$R4 6657
1 TraesCS3B01G552400 chr3D 588484253 588490630 6377 True 2201.000000 5029 93.2905 60 6406 4 chr3D.!!$R3 6346
2 TraesCS3B01G552400 chr3A 718831908 718838687 6779 True 1001.714286 3555 90.8830 60 6321 7 chr3A.!!$R1 6261

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
431 518 0.470080 TTGGGATAGCGAGAGGGAGG 60.470 60.0 0.00 0.00 0.00 4.30 F
1348 2144 0.902531 TTCTACCTCAAGAAGCCCGG 59.097 55.0 0.00 0.00 31.85 5.73 F
2552 3435 0.906775 CCAATGCCTGCCTTTCCAAT 59.093 50.0 0.00 0.00 0.00 3.16 F
3414 4311 0.039165 GCTGTTGCAAGTTACCCAGC 60.039 55.0 18.12 18.12 38.58 4.85 F
3415 4312 0.598065 CTGTTGCAAGTTACCCAGCC 59.402 55.0 0.00 0.00 0.00 4.85 F
3701 4602 0.725686 CTCCTTGAATCGTGCTGCTG 59.274 55.0 0.00 0.00 0.00 4.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1695 2494 0.039888 GCGGCGTGGTTACAAAACAT 60.040 50.000 9.37 0.0 37.34 2.71 R
2709 3592 0.381801 AACCAAGCAAGCGAGTGTTG 59.618 50.000 0.00 0.0 0.00 3.33 R
3714 4615 0.247460 CAGTAGCAGCAGCAGGTGTA 59.753 55.000 10.14 0.0 44.89 2.90 R
5183 6126 0.399806 ACCCAACAAAATGCACCCCT 60.400 50.000 0.00 0.0 0.00 4.79 R
5250 6193 1.999648 AAAAGCTTCTGGTGCCATCA 58.000 45.000 0.00 0.0 0.00 3.07 R
5660 6669 1.215173 TCCAGCATATTCCCAACCAGG 59.785 52.381 0.00 0.0 37.03 4.45 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 4.486503 GCAGGAGAGGCTGGGCAG 62.487 72.222 0.00 0.00 0.00 4.85
29 30 3.007920 CAGGAGAGGCTGGGCAGT 61.008 66.667 0.00 0.00 0.00 4.40
30 31 3.007920 AGGAGAGGCTGGGCAGTG 61.008 66.667 0.00 0.00 0.00 3.66
31 32 4.792804 GGAGAGGCTGGGCAGTGC 62.793 72.222 6.55 6.55 0.00 4.40
38 39 4.641645 CTGGGCAGTGCGTGGGAA 62.642 66.667 9.45 0.00 0.00 3.97
39 40 4.641645 TGGGCAGTGCGTGGGAAG 62.642 66.667 9.45 0.00 0.00 3.46
43 44 3.052082 CAGTGCGTGGGAAGCCTG 61.052 66.667 0.00 0.00 0.00 4.85
52 53 3.717294 GGAAGCCTGCGGGGAGAA 61.717 66.667 15.02 0.00 37.23 2.87
53 54 2.351276 GAAGCCTGCGGGGAGAAA 59.649 61.111 15.02 0.00 37.23 2.52
54 55 1.303317 GAAGCCTGCGGGGAGAAAA 60.303 57.895 15.02 0.00 37.23 2.29
55 56 1.303643 AAGCCTGCGGGGAGAAAAG 60.304 57.895 15.02 0.00 37.23 2.27
56 57 1.779061 AAGCCTGCGGGGAGAAAAGA 61.779 55.000 15.02 0.00 37.23 2.52
57 58 1.303317 GCCTGCGGGGAGAAAAGAA 60.303 57.895 15.02 0.00 37.23 2.52
58 59 1.308783 GCCTGCGGGGAGAAAAGAAG 61.309 60.000 15.02 0.00 37.23 2.85
59 60 1.308783 CCTGCGGGGAGAAAAGAAGC 61.309 60.000 2.57 0.00 37.23 3.86
60 61 1.639298 CTGCGGGGAGAAAAGAAGCG 61.639 60.000 0.00 0.00 0.00 4.68
61 62 2.399356 GCGGGGAGAAAAGAAGCGG 61.399 63.158 0.00 0.00 0.00 5.52
62 63 2.399356 CGGGGAGAAAAGAAGCGGC 61.399 63.158 0.00 0.00 0.00 6.53
109 117 3.003793 GTGATCATCGTCGATCCAGAAGA 59.996 47.826 4.34 0.00 41.00 2.87
159 167 2.690653 TTTTCAGAGCCCCCACACCG 62.691 60.000 0.00 0.00 0.00 4.94
205 241 2.806945 CCAACCTTGGCTTCCATAGA 57.193 50.000 0.00 0.00 42.21 1.98
222 280 8.856153 TTCCATAGACATTACAAAAGTGCTAA 57.144 30.769 0.00 0.00 0.00 3.09
246 304 7.751768 AAAATCACACCAAGGAAAACAAAAA 57.248 28.000 0.00 0.00 0.00 1.94
267 325 7.509141 AAAAATAAAGGTGCCATGAAAAAGG 57.491 32.000 0.00 0.00 0.00 3.11
276 334 2.901291 CCATGAAAAAGGAAGGGGGAA 58.099 47.619 0.00 0.00 0.00 3.97
295 375 4.164221 GGGAAAGAGAGAGAGAGAGAGAGA 59.836 50.000 0.00 0.00 0.00 3.10
301 381 3.964031 AGAGAGAGAGAGAGAGAGGAGAC 59.036 52.174 0.00 0.00 0.00 3.36
303 383 2.693591 GAGAGAGAGAGAGAGGAGACGA 59.306 54.545 0.00 0.00 0.00 4.20
310 390 0.531974 AGAGAGGAGACGAGCTAGCG 60.532 60.000 9.55 0.00 37.29 4.26
311 391 1.503818 GAGAGGAGACGAGCTAGCGG 61.504 65.000 9.55 8.21 35.12 5.52
312 392 3.189010 GAGGAGACGAGCTAGCGGC 62.189 68.421 9.55 4.76 40.32 6.53
391 474 5.070847 GCTAGAGGTAGTAGAGTGGTAGAGT 59.929 48.000 0.00 0.00 0.00 3.24
431 518 0.470080 TTGGGATAGCGAGAGGGAGG 60.470 60.000 0.00 0.00 0.00 4.30
441 528 4.500826 GAGGGAGGGGGAGGGGTC 62.501 77.778 0.00 0.00 0.00 4.46
519 610 3.877450 GCCCTCGCCATCCATCCA 61.877 66.667 0.00 0.00 0.00 3.41
528 619 1.669115 CATCCATCCATCCGTCCGC 60.669 63.158 0.00 0.00 0.00 5.54
531 622 4.969196 CATCCATCCGTCCGCCCG 62.969 72.222 0.00 0.00 0.00 6.13
591 690 2.046507 CACCACAGCCTCAGCCTC 60.047 66.667 0.00 0.00 41.25 4.70
655 754 4.816925 GCGCTAGTGGAGGATTTTTATTCT 59.183 41.667 0.00 0.00 0.00 2.40
657 756 5.467063 CGCTAGTGGAGGATTTTTATTCTCC 59.533 44.000 5.65 5.65 44.39 3.71
658 757 6.596621 GCTAGTGGAGGATTTTTATTCTCCT 58.403 40.000 12.51 0.00 44.43 3.69
659 758 7.057264 GCTAGTGGAGGATTTTTATTCTCCTT 58.943 38.462 12.51 5.17 44.43 3.36
660 759 7.227711 GCTAGTGGAGGATTTTTATTCTCCTTC 59.772 40.741 12.51 6.95 44.43 3.46
661 760 6.427441 AGTGGAGGATTTTTATTCTCCTTCC 58.573 40.000 12.51 2.91 44.43 3.46
662 761 5.297029 GTGGAGGATTTTTATTCTCCTTCCG 59.703 44.000 12.51 0.00 44.43 4.30
664 763 5.527951 GGAGGATTTTTATTCTCCTTCCGTC 59.472 44.000 5.40 0.00 41.76 4.79
666 765 4.272748 GGATTTTTATTCTCCTTCCGTCCG 59.727 45.833 0.00 0.00 0.00 4.79
667 766 3.967332 TTTTATTCTCCTTCCGTCCGT 57.033 42.857 0.00 0.00 0.00 4.69
668 767 3.515330 TTTATTCTCCTTCCGTCCGTC 57.485 47.619 0.00 0.00 0.00 4.79
734 838 3.224324 TAGCTTCTAGGCGGCGGG 61.224 66.667 9.78 0.00 37.29 6.13
777 881 2.032636 CGGCGGTATTTTTAATCCCGAC 60.033 50.000 7.48 3.70 43.27 4.79
1163 1291 1.519246 CATCTTCCCGCTGCTCTCA 59.481 57.895 0.00 0.00 0.00 3.27
1348 2144 0.902531 TTCTACCTCAAGAAGCCCGG 59.097 55.000 0.00 0.00 31.85 5.73
1490 2286 2.435059 GGCTTCGACTGCTCCACC 60.435 66.667 9.10 0.00 0.00 4.61
1620 2419 2.364842 TCCTCTCCTCCCAGCAGC 60.365 66.667 0.00 0.00 0.00 5.25
1694 2493 1.687612 CACCTCCAGCCATCAAGGT 59.312 57.895 0.00 0.00 42.87 3.50
1695 2494 0.911769 CACCTCCAGCCATCAAGGTA 59.088 55.000 0.00 0.00 40.13 3.08
1696 2495 1.492176 CACCTCCAGCCATCAAGGTAT 59.508 52.381 0.00 0.00 40.13 2.73
1697 2496 1.492176 ACCTCCAGCCATCAAGGTATG 59.508 52.381 0.00 0.00 40.33 2.39
1698 2497 1.492176 CCTCCAGCCATCAAGGTATGT 59.508 52.381 0.00 0.00 40.61 2.29
1743 2565 1.225637 CACGCGTGGTGTAATTCGC 60.226 57.895 31.15 0.00 41.89 4.70
1763 2585 1.202188 CGACAGTTCGCTCAGCATCTA 60.202 52.381 0.00 0.00 38.71 1.98
1769 2595 3.634448 AGTTCGCTCAGCATCTACTATGT 59.366 43.478 0.00 0.00 0.00 2.29
1770 2596 3.632855 TCGCTCAGCATCTACTATGTG 57.367 47.619 0.00 0.00 0.00 3.21
1771 2597 2.952310 TCGCTCAGCATCTACTATGTGT 59.048 45.455 0.00 0.00 0.00 3.72
1772 2598 3.048501 CGCTCAGCATCTACTATGTGTG 58.951 50.000 0.00 0.00 0.00 3.82
1847 2673 4.012895 GTGTTCAGGTGCGTGCGG 62.013 66.667 0.00 0.00 0.00 5.69
2098 2927 3.550992 CGACATGTACGGCGGTGC 61.551 66.667 13.24 6.34 0.00 5.01
2153 2985 3.876198 CACATACTTGGCGGCGGC 61.876 66.667 27.76 27.76 38.90 6.53
2458 3341 7.411486 AATCAACACTAGTAGTACTCTGCAT 57.589 36.000 5.96 0.00 0.00 3.96
2460 3343 7.317842 TCAACACTAGTAGTACTCTGCATAC 57.682 40.000 5.96 0.00 0.00 2.39
2551 3434 1.193462 CCCAATGCCTGCCTTTCCAA 61.193 55.000 0.00 0.00 0.00 3.53
2552 3435 0.906775 CCAATGCCTGCCTTTCCAAT 59.093 50.000 0.00 0.00 0.00 3.16
2665 3548 7.012704 GCTTCTCTCCTGCTGATAGATAGATAG 59.987 44.444 0.00 0.00 0.00 2.08
2666 3549 7.747809 TCTCTCCTGCTGATAGATAGATAGA 57.252 40.000 0.00 0.00 0.00 1.98
2667 3550 8.335819 TCTCTCCTGCTGATAGATAGATAGAT 57.664 38.462 0.00 0.00 0.00 1.98
2668 3551 9.445973 TCTCTCCTGCTGATAGATAGATAGATA 57.554 37.037 0.00 0.00 0.00 1.98
2709 3592 3.067320 AGCAGAAAAGTTTGACTCTTGCC 59.933 43.478 0.00 0.00 0.00 4.52
2717 3600 1.581934 TTGACTCTTGCCAACACTCG 58.418 50.000 0.00 0.00 0.00 4.18
2727 3610 1.447317 CCAACACTCGCTTGCTTGGT 61.447 55.000 3.37 0.00 0.00 3.67
2792 3675 5.471456 CCATGCCTATCTTGTTTATCTCACC 59.529 44.000 0.00 0.00 0.00 4.02
2840 3723 5.432645 TGTTTGTTTTCCCCATCTTTTTCC 58.567 37.500 0.00 0.00 0.00 3.13
2913 3796 5.622007 GCATTGGCTTTGTGCTTTGTAGATA 60.622 40.000 0.00 0.00 42.39 1.98
2960 3843 1.341482 TGTGTCCTAGAGAGAGGCCAG 60.341 57.143 5.01 0.00 36.45 4.85
2994 3877 3.490419 GCATGTGATGAGGGAATTCTTGC 60.490 47.826 5.23 0.00 0.00 4.01
3018 3901 8.745590 TGCGCTTATTATACACCATCTTATCTA 58.254 33.333 9.73 0.00 0.00 1.98
3019 3902 9.021863 GCGCTTATTATACACCATCTTATCTAC 57.978 37.037 0.00 0.00 0.00 2.59
3091 3979 5.340439 TTGATAATTGGCATGCATGTTGA 57.660 34.783 26.79 13.49 0.00 3.18
3092 3980 5.538849 TGATAATTGGCATGCATGTTGAT 57.461 34.783 26.79 15.04 0.00 2.57
3093 3981 5.293560 TGATAATTGGCATGCATGTTGATG 58.706 37.500 26.79 3.24 0.00 3.07
3141 4035 1.235696 GGAGGAGAGGAGGCAGGAT 59.764 63.158 0.00 0.00 0.00 3.24
3142 4036 0.831711 GGAGGAGAGGAGGCAGGATC 60.832 65.000 0.00 0.00 0.00 3.36
3143 4037 0.105760 GAGGAGAGGAGGCAGGATCA 60.106 60.000 0.00 0.00 0.00 2.92
3144 4038 0.567182 AGGAGAGGAGGCAGGATCAT 59.433 55.000 0.00 0.00 0.00 2.45
3173 4067 1.227943 TTCCTGTGCTGTGCTCCAC 60.228 57.895 0.00 0.00 34.56 4.02
3175 4069 2.429058 CTGTGCTGTGCTCCACCT 59.571 61.111 0.00 0.00 32.73 4.00
3347 4241 2.608998 GCCTTCTTTCTCCTTTGCTTGC 60.609 50.000 0.00 0.00 0.00 4.01
3414 4311 0.039165 GCTGTTGCAAGTTACCCAGC 60.039 55.000 18.12 18.12 38.58 4.85
3415 4312 0.598065 CTGTTGCAAGTTACCCAGCC 59.402 55.000 0.00 0.00 0.00 4.85
3432 4329 2.027024 CGCATCATGCACATGGGC 59.973 61.111 14.67 14.67 45.36 5.36
3440 4337 3.078836 GCACATGGGCAGGCCATT 61.079 61.111 25.93 14.26 37.98 3.16
3441 4338 3.085119 GCACATGGGCAGGCCATTC 62.085 63.158 25.93 13.84 37.98 2.67
3442 4339 1.683025 CACATGGGCAGGCCATTCA 60.683 57.895 25.93 8.13 37.98 2.57
3443 4340 1.046472 CACATGGGCAGGCCATTCAT 61.046 55.000 25.93 11.71 37.98 2.57
3444 4341 1.046472 ACATGGGCAGGCCATTCATG 61.046 55.000 25.93 21.78 38.42 3.07
3455 4355 2.724977 CCATTCATGCATGGCTCATC 57.275 50.000 25.97 0.00 37.51 2.92
3479 4379 9.970553 ATCAGCCATGATGAAGTATATGTTAAT 57.029 29.630 0.00 0.00 44.67 1.40
3480 4380 9.797642 TCAGCCATGATGAAGTATATGTTAATT 57.202 29.630 0.00 0.00 0.00 1.40
3547 4448 3.324117 AGCTGCTATTATCTCATGTGCG 58.676 45.455 0.00 0.00 0.00 5.34
3552 4453 3.241900 GCTATTATCTCATGTGCGCGATG 60.242 47.826 12.10 11.94 0.00 3.84
3701 4602 0.725686 CTCCTTGAATCGTGCTGCTG 59.274 55.000 0.00 0.00 0.00 4.41
3714 4615 2.227388 GTGCTGCTGCTTGACTAATTGT 59.773 45.455 17.00 0.00 40.48 2.71
3750 4651 2.932261 ACTGTTGGACAAGGTTTCCTC 58.068 47.619 0.00 0.00 33.84 3.71
3755 4656 3.223674 TGGACAAGGTTTCCTCCTTTC 57.776 47.619 0.00 0.00 44.36 2.62
3758 4659 3.149981 GACAAGGTTTCCTCCTTTCCTG 58.850 50.000 0.00 0.00 44.36 3.86
3829 4730 4.442472 GCTATTTAGTCGCCCTTGGACTTA 60.442 45.833 0.00 0.00 41.83 2.24
3830 4731 4.563140 ATTTAGTCGCCCTTGGACTTAA 57.437 40.909 0.00 0.00 41.83 1.85
3834 4735 3.081804 AGTCGCCCTTGGACTTAATTTG 58.918 45.455 0.00 0.00 41.83 2.32
3844 4745 9.627123 CCCTTGGACTTAATTTGTTCTATATGA 57.373 33.333 0.00 0.00 0.00 2.15
3988 4892 6.757947 GCACAATAAATTGGCTTGATATGTGT 59.242 34.615 7.56 0.00 41.96 3.72
4133 5041 4.074259 TGTGCTGCTTGTATTCTTGTGAT 58.926 39.130 0.00 0.00 0.00 3.06
4151 5059 8.215736 TCTTGTGATGATGGTGATCTAATTGAT 58.784 33.333 0.00 0.00 38.27 2.57
4152 5060 7.739498 TGTGATGATGGTGATCTAATTGATG 57.261 36.000 0.00 0.00 35.14 3.07
4153 5061 7.511268 TGTGATGATGGTGATCTAATTGATGA 58.489 34.615 0.00 0.00 35.14 2.92
4167 5075 4.851639 ATTGATGACTAGCCCAACTCTT 57.148 40.909 0.00 0.00 0.00 2.85
4171 5079 4.101585 TGATGACTAGCCCAACTCTTATGG 59.898 45.833 0.00 0.00 37.71 2.74
4230 5138 9.796120 TGAAAAACTATTGTTTGTCCTGTTAAG 57.204 29.630 16.98 0.00 45.31 1.85
4246 5155 6.719370 TCCTGTTAAGTTTATGGCATCAACTT 59.281 34.615 31.21 31.21 42.20 2.66
4250 5159 5.391312 AAGTTTATGGCATCAACTTGGTC 57.609 39.130 29.37 4.59 38.92 4.02
4270 5179 5.181811 TGGTCTTGTGATTAATGACTTGCTG 59.818 40.000 6.61 0.00 0.00 4.41
4271 5180 5.182001 GGTCTTGTGATTAATGACTTGCTGT 59.818 40.000 6.61 0.00 0.00 4.40
4344 5253 4.893424 TGAAGCAACTTTTGTACTCACC 57.107 40.909 0.00 0.00 0.00 4.02
4380 5299 6.364701 TGGGATTGCTAACTTGCTATGTAAT 58.635 36.000 0.00 0.00 0.00 1.89
4426 5345 7.557719 AGGTGTGATTAGGATTTTGATTACCTG 59.442 37.037 0.00 0.00 34.42 4.00
4620 5539 3.695830 ACCATGGTGTTCGACAATACT 57.304 42.857 18.99 0.00 0.00 2.12
4621 5540 3.334691 ACCATGGTGTTCGACAATACTG 58.665 45.455 18.99 0.00 0.00 2.74
4822 5762 7.169140 CACGGTGATCGATGAAATTGTATCTTA 59.831 37.037 0.54 0.00 42.43 2.10
4914 5854 4.993029 AGTGTAGACTGCTGACTATTCC 57.007 45.455 6.13 0.00 0.00 3.01
4928 5868 7.390718 TGCTGACTATTCCTTTTCCTTAACTTC 59.609 37.037 0.00 0.00 0.00 3.01
4943 5883 8.141298 TCCTTAACTTCTTGGTGATATGTGTA 57.859 34.615 0.00 0.00 0.00 2.90
4944 5884 8.768397 TCCTTAACTTCTTGGTGATATGTGTAT 58.232 33.333 0.00 0.00 0.00 2.29
4949 5889 6.994496 ACTTCTTGGTGATATGTGTATGATGG 59.006 38.462 0.00 0.00 0.00 3.51
4967 5907 9.486497 GTATGATGGCTTATGTGGATATCATAG 57.514 37.037 4.83 0.00 36.97 2.23
5041 5983 6.375455 ACTTTACCTAGCCATTCTGACAATTG 59.625 38.462 3.24 3.24 0.00 2.32
5072 6014 1.136336 CAACCGTTGAGCTTCTAACGC 60.136 52.381 19.82 0.00 45.91 4.84
5109 6051 9.885934 AAAAGTTTGTTTTAATGTTTGTTGGAC 57.114 25.926 0.00 0.00 0.00 4.02
5131 6073 7.048512 GGACCACTGAGTAGTTAATATTGCTT 58.951 38.462 0.00 0.00 34.07 3.91
5133 6075 7.852263 ACCACTGAGTAGTTAATATTGCTTCT 58.148 34.615 0.00 0.01 34.07 2.85
5183 6126 6.381481 TGTCTGTTAGAACTCGTAAGACAA 57.619 37.500 9.04 0.00 45.01 3.18
5305 6248 5.491070 CAAGGTACAGAAATGTGGATCTGA 58.509 41.667 9.56 0.00 44.64 3.27
5336 6279 5.539979 ACATTTGCTCATTATTGTGTTGCA 58.460 33.333 0.00 0.00 0.00 4.08
5366 6309 5.354234 CACTGATGGTTAGGTTTCCATACAC 59.646 44.000 0.00 0.00 43.45 2.90
5368 6311 3.724732 TGGTTAGGTTTCCATACACCC 57.275 47.619 0.00 0.00 32.92 4.61
5407 6350 4.627900 TCTTTACATTTTGCGACGCTGATA 59.372 37.500 22.08 5.45 0.00 2.15
5508 6515 6.613755 AACAACGTATTGGCACCTTATATC 57.386 37.500 0.00 0.00 40.42 1.63
5570 6578 9.896645 CATTTTATGGCATATACTCCTCTGTAT 57.103 33.333 8.24 0.00 37.04 2.29
5627 6635 7.557358 TCAATGCTGTATATTTTCCTGACACAT 59.443 33.333 0.00 0.00 0.00 3.21
5665 6674 2.097978 AAATGAGCCCCTTGCCTGGT 62.098 55.000 0.00 0.00 42.71 4.00
5667 6676 2.677875 GAGCCCCTTGCCTGGTTG 60.678 66.667 0.00 0.00 42.71 3.77
5690 6699 3.696051 GGAATATGCTGGAGTTGCTTTCA 59.304 43.478 0.00 0.00 0.00 2.69
5713 6722 2.127232 GCCGAACGCACTGCTTTC 60.127 61.111 9.66 9.66 37.47 2.62
5717 6726 1.732259 CCGAACGCACTGCTTTCTAAT 59.268 47.619 15.91 0.00 35.19 1.73
5718 6727 2.927477 CCGAACGCACTGCTTTCTAATA 59.073 45.455 15.91 0.00 35.19 0.98
5719 6728 3.000322 CCGAACGCACTGCTTTCTAATAG 60.000 47.826 15.91 2.95 35.19 1.73
5720 6729 3.612860 CGAACGCACTGCTTTCTAATAGT 59.387 43.478 15.91 0.00 35.19 2.12
5721 6730 4.796830 CGAACGCACTGCTTTCTAATAGTA 59.203 41.667 15.91 0.00 35.19 1.82
5722 6731 5.275788 CGAACGCACTGCTTTCTAATAGTAC 60.276 44.000 15.91 0.00 35.19 2.73
5723 6732 5.326200 ACGCACTGCTTTCTAATAGTACT 57.674 39.130 0.00 0.00 0.00 2.73
5724 6733 5.341617 ACGCACTGCTTTCTAATAGTACTC 58.658 41.667 0.00 0.00 0.00 2.59
5726 6735 5.450688 CGCACTGCTTTCTAATAGTACTCCT 60.451 44.000 0.00 0.00 0.00 3.69
5727 6736 6.342111 GCACTGCTTTCTAATAGTACTCCTT 58.658 40.000 0.00 0.00 0.00 3.36
5728 6737 6.477360 GCACTGCTTTCTAATAGTACTCCTTC 59.523 42.308 0.00 0.00 0.00 3.46
5729 6738 7.631811 GCACTGCTTTCTAATAGTACTCCTTCT 60.632 40.741 0.00 0.00 0.00 2.85
5730 6739 7.704472 CACTGCTTTCTAATAGTACTCCTTCTG 59.296 40.741 0.00 0.00 0.00 3.02
5731 6740 7.397761 ACTGCTTTCTAATAGTACTCCTTCTGT 59.602 37.037 0.00 0.00 0.00 3.41
5732 6741 8.818622 TGCTTTCTAATAGTACTCCTTCTGTA 57.181 34.615 0.00 0.00 0.00 2.74
5733 6742 9.251440 TGCTTTCTAATAGTACTCCTTCTGTAA 57.749 33.333 0.00 0.00 0.00 2.41
5748 6757 9.400638 CTCCTTCTGTAAAGTAATATAAGAGCG 57.599 37.037 0.00 0.00 0.00 5.03
5749 6758 8.910944 TCCTTCTGTAAAGTAATATAAGAGCGT 58.089 33.333 0.00 0.00 0.00 5.07
5750 6759 9.530633 CCTTCTGTAAAGTAATATAAGAGCGTT 57.469 33.333 0.00 0.00 0.00 4.84
5765 6774 8.680039 ATAAGAGCGTTTAGATCACTAGTAGT 57.320 34.615 0.00 0.00 37.82 2.73
5782 6791 8.680039 ACTAGTAGTGATCTAAACGCTCTTAT 57.320 34.615 0.85 0.00 0.00 1.73
5783 6792 9.775854 ACTAGTAGTGATCTAAACGCTCTTATA 57.224 33.333 0.85 0.00 0.00 0.98
5794 6803 9.241317 TCTAAACGCTCTTATAATTCTTTACGG 57.759 33.333 0.00 0.00 0.00 4.02
5795 6804 9.241317 CTAAACGCTCTTATAATTCTTTACGGA 57.759 33.333 0.00 0.00 0.00 4.69
5796 6805 7.695869 AACGCTCTTATAATTCTTTACGGAG 57.304 36.000 0.00 0.00 0.00 4.63
5797 6806 6.214399 ACGCTCTTATAATTCTTTACGGAGG 58.786 40.000 0.00 0.00 0.00 4.30
5798 6807 5.634020 CGCTCTTATAATTCTTTACGGAGGG 59.366 44.000 0.00 0.00 0.00 4.30
5799 6808 6.516194 CGCTCTTATAATTCTTTACGGAGGGA 60.516 42.308 0.00 0.00 32.14 4.20
5800 6809 6.869388 GCTCTTATAATTCTTTACGGAGGGAG 59.131 42.308 0.00 0.00 0.00 4.30
5857 6866 3.525537 ACATTCTGATGCTTGGAGTACG 58.474 45.455 0.00 0.00 36.72 3.67
5865 6874 0.320421 GCTTGGAGTACGCAGTTGGA 60.320 55.000 0.00 0.00 37.78 3.53
5876 6885 3.016031 ACGCAGTTGGATTGATTATGCA 58.984 40.909 0.00 0.00 37.78 3.96
5879 6888 4.604976 GCAGTTGGATTGATTATGCAGAC 58.395 43.478 0.00 0.00 35.86 3.51
6016 7025 2.303175 GTGTTGGTTAAAGCTCCACCA 58.697 47.619 7.39 7.39 38.89 4.17
6017 7026 2.890945 GTGTTGGTTAAAGCTCCACCAT 59.109 45.455 11.38 0.00 40.35 3.55
6042 7051 2.037144 GCTTCCTGAAATGATGGGCAT 58.963 47.619 0.00 0.00 39.43 4.40
6206 7215 2.045926 GCCCTGTCTGGTGCGAAT 60.046 61.111 0.00 0.00 0.00 3.34
6241 7250 3.987547 AGCTGTCCTGATGATCATTACG 58.012 45.455 10.14 0.00 0.00 3.18
6284 7293 1.626321 TGCTTAAATGAGGGGTGTCGA 59.374 47.619 0.00 0.00 0.00 4.20
6308 7317 3.806941 GGCCATGCCTATTGTCTCA 57.193 52.632 0.00 0.00 46.69 3.27
6321 7330 2.031258 TGTCTCAAGTGCCAACGAAA 57.969 45.000 0.00 0.00 0.00 3.46
6322 7331 2.360844 TGTCTCAAGTGCCAACGAAAA 58.639 42.857 0.00 0.00 0.00 2.29
6324 7333 2.354821 GTCTCAAGTGCCAACGAAAAGT 59.645 45.455 0.00 0.00 0.00 2.66
6353 7419 6.644181 AGAAACTATATGATGTGTCATGCTCG 59.356 38.462 1.37 0.00 44.62 5.03
6400 7466 7.984050 CACTATGAATCTCAACCTACTTGTGAT 59.016 37.037 0.00 0.00 42.41 3.06
6406 7472 6.174720 TCTCAACCTACTTGTGATTGAGTT 57.825 37.500 11.00 0.00 44.28 3.01
6407 7473 5.991606 TCTCAACCTACTTGTGATTGAGTTG 59.008 40.000 11.00 0.00 44.28 3.16
6408 7474 5.680619 TCAACCTACTTGTGATTGAGTTGT 58.319 37.500 0.00 0.00 35.87 3.32
6409 7475 5.527214 TCAACCTACTTGTGATTGAGTTGTG 59.473 40.000 0.00 0.00 35.87 3.33
6410 7476 3.815401 ACCTACTTGTGATTGAGTTGTGC 59.185 43.478 0.00 0.00 0.00 4.57
6411 7477 3.120546 CCTACTTGTGATTGAGTTGTGCG 60.121 47.826 0.00 0.00 0.00 5.34
6412 7478 2.560504 ACTTGTGATTGAGTTGTGCGA 58.439 42.857 0.00 0.00 0.00 5.10
6413 7479 3.141398 ACTTGTGATTGAGTTGTGCGAT 58.859 40.909 0.00 0.00 0.00 4.58
6414 7480 4.314961 ACTTGTGATTGAGTTGTGCGATA 58.685 39.130 0.00 0.00 0.00 2.92
6415 7481 4.389992 ACTTGTGATTGAGTTGTGCGATAG 59.610 41.667 0.00 0.00 0.00 2.08
6431 7497 3.924610 CGATAGCTGGAAACGTTTTAGC 58.075 45.455 28.98 28.98 33.57 3.09
6432 7498 3.242316 CGATAGCTGGAAACGTTTTAGCC 60.242 47.826 30.80 22.04 33.74 3.93
6433 7499 2.271944 AGCTGGAAACGTTTTAGCCT 57.728 45.000 30.80 21.49 33.74 4.58
6434 7500 1.880027 AGCTGGAAACGTTTTAGCCTG 59.120 47.619 30.80 23.68 33.74 4.85
6435 7501 1.607148 GCTGGAAACGTTTTAGCCTGT 59.393 47.619 27.32 2.73 0.00 4.00
6436 7502 2.034179 GCTGGAAACGTTTTAGCCTGTT 59.966 45.455 27.32 2.07 0.00 3.16
6437 7503 3.628017 CTGGAAACGTTTTAGCCTGTTG 58.372 45.455 15.89 1.43 0.00 3.33
6438 7504 3.280295 TGGAAACGTTTTAGCCTGTTGA 58.720 40.909 15.89 0.00 0.00 3.18
6439 7505 3.314080 TGGAAACGTTTTAGCCTGTTGAG 59.686 43.478 15.89 0.00 0.00 3.02
6440 7506 3.304458 GGAAACGTTTTAGCCTGTTGAGG 60.304 47.826 15.89 0.00 43.19 3.86
6448 7514 4.760047 CCTGTTGAGGCCGACGGG 62.760 72.222 17.22 16.96 44.54 5.28
6449 7515 4.003788 CTGTTGAGGCCGACGGGT 62.004 66.667 17.22 0.00 34.97 5.28
6450 7516 3.530910 CTGTTGAGGCCGACGGGTT 62.531 63.158 17.22 0.00 34.97 4.11
6451 7517 2.741211 GTTGAGGCCGACGGGTTC 60.741 66.667 17.22 0.00 34.97 3.62
6452 7518 3.235481 TTGAGGCCGACGGGTTCA 61.235 61.111 17.22 2.88 34.97 3.18
6453 7519 2.589157 TTGAGGCCGACGGGTTCAT 61.589 57.895 17.22 0.00 31.89 2.57
6454 7520 2.511600 GAGGCCGACGGGTTCATG 60.512 66.667 17.22 0.00 34.97 3.07
6455 7521 3.310860 GAGGCCGACGGGTTCATGT 62.311 63.158 17.22 0.00 34.97 3.21
6456 7522 2.359478 GGCCGACGGGTTCATGTT 60.359 61.111 17.22 0.00 34.97 2.71
6457 7523 1.078988 GGCCGACGGGTTCATGTTA 60.079 57.895 17.22 0.00 34.97 2.41
6458 7524 0.674269 GGCCGACGGGTTCATGTTAA 60.674 55.000 17.22 0.00 34.97 2.01
6459 7525 1.158434 GCCGACGGGTTCATGTTAAA 58.842 50.000 17.22 0.00 34.97 1.52
6460 7526 1.741145 GCCGACGGGTTCATGTTAAAT 59.259 47.619 17.22 0.00 34.97 1.40
6461 7527 2.937799 GCCGACGGGTTCATGTTAAATA 59.062 45.455 17.22 0.00 34.97 1.40
6462 7528 3.001939 GCCGACGGGTTCATGTTAAATAG 59.998 47.826 17.22 0.00 34.97 1.73
6463 7529 4.435425 CCGACGGGTTCATGTTAAATAGA 58.565 43.478 5.81 0.00 0.00 1.98
6464 7530 4.506654 CCGACGGGTTCATGTTAAATAGAG 59.493 45.833 5.81 0.00 0.00 2.43
6465 7531 5.107133 CGACGGGTTCATGTTAAATAGAGT 58.893 41.667 0.00 0.00 0.00 3.24
6466 7532 5.579511 CGACGGGTTCATGTTAAATAGAGTT 59.420 40.000 0.00 0.00 0.00 3.01
6467 7533 6.455113 CGACGGGTTCATGTTAAATAGAGTTG 60.455 42.308 0.00 0.00 0.00 3.16
6468 7534 5.646360 ACGGGTTCATGTTAAATAGAGTTGG 59.354 40.000 0.00 0.00 0.00 3.77
6469 7535 5.065988 CGGGTTCATGTTAAATAGAGTTGGG 59.934 44.000 0.00 0.00 0.00 4.12
6470 7536 5.359860 GGGTTCATGTTAAATAGAGTTGGGG 59.640 44.000 0.00 0.00 0.00 4.96
6471 7537 5.163550 GGTTCATGTTAAATAGAGTTGGGGC 60.164 44.000 0.00 0.00 0.00 5.80
6472 7538 4.196193 TCATGTTAAATAGAGTTGGGGCG 58.804 43.478 0.00 0.00 0.00 6.13
6473 7539 2.361789 TGTTAAATAGAGTTGGGGCGC 58.638 47.619 0.00 0.00 0.00 6.53
6474 7540 2.290387 TGTTAAATAGAGTTGGGGCGCA 60.290 45.455 10.83 0.00 0.00 6.09
6475 7541 2.032680 TAAATAGAGTTGGGGCGCAC 57.967 50.000 10.83 4.83 0.00 5.34
6476 7542 0.679960 AAATAGAGTTGGGGCGCACC 60.680 55.000 25.59 25.59 39.11 5.01
6477 7543 1.562672 AATAGAGTTGGGGCGCACCT 61.563 55.000 32.18 10.16 40.03 4.00
6478 7544 1.972660 ATAGAGTTGGGGCGCACCTC 61.973 60.000 32.18 22.40 40.03 3.85
6486 7552 4.740822 GGCGCACCTCCCAACCAT 62.741 66.667 10.83 0.00 0.00 3.55
6487 7553 2.270850 GCGCACCTCCCAACCATA 59.729 61.111 0.30 0.00 0.00 2.74
6488 7554 1.819632 GCGCACCTCCCAACCATAG 60.820 63.158 0.30 0.00 0.00 2.23
6489 7555 1.819632 CGCACCTCCCAACCATAGC 60.820 63.158 0.00 0.00 0.00 2.97
6490 7556 1.819632 GCACCTCCCAACCATAGCG 60.820 63.158 0.00 0.00 0.00 4.26
6491 7557 1.819632 CACCTCCCAACCATAGCGC 60.820 63.158 0.00 0.00 0.00 5.92
6492 7558 2.297895 ACCTCCCAACCATAGCGCA 61.298 57.895 11.47 0.00 0.00 6.09
6493 7559 1.149174 CCTCCCAACCATAGCGCAT 59.851 57.895 11.47 0.00 0.00 4.73
6494 7560 0.396435 CCTCCCAACCATAGCGCATA 59.604 55.000 11.47 0.00 0.00 3.14
6495 7561 1.512926 CTCCCAACCATAGCGCATAC 58.487 55.000 11.47 0.00 0.00 2.39
6496 7562 0.833949 TCCCAACCATAGCGCATACA 59.166 50.000 11.47 0.00 0.00 2.29
6497 7563 1.419762 TCCCAACCATAGCGCATACAT 59.580 47.619 11.47 0.00 0.00 2.29
6498 7564 2.158682 TCCCAACCATAGCGCATACATT 60.159 45.455 11.47 0.00 0.00 2.71
6499 7565 2.030893 CCCAACCATAGCGCATACATTG 60.031 50.000 11.47 8.46 0.00 2.82
6500 7566 2.618241 CCAACCATAGCGCATACATTGT 59.382 45.455 11.47 0.00 0.00 2.71
6501 7567 3.066621 CCAACCATAGCGCATACATTGTT 59.933 43.478 11.47 2.69 0.00 2.83
6502 7568 3.969117 ACCATAGCGCATACATTGTTG 57.031 42.857 11.47 0.00 0.00 3.33
6503 7569 3.540617 ACCATAGCGCATACATTGTTGA 58.459 40.909 11.47 0.00 0.00 3.18
6504 7570 3.561310 ACCATAGCGCATACATTGTTGAG 59.439 43.478 11.47 0.00 0.00 3.02
6505 7571 3.809279 CCATAGCGCATACATTGTTGAGA 59.191 43.478 11.47 0.00 0.00 3.27
6506 7572 4.453478 CCATAGCGCATACATTGTTGAGAT 59.547 41.667 11.47 0.00 0.00 2.75
6507 7573 5.049198 CCATAGCGCATACATTGTTGAGATT 60.049 40.000 11.47 0.00 0.00 2.40
6508 7574 6.147656 CCATAGCGCATACATTGTTGAGATTA 59.852 38.462 11.47 0.00 0.00 1.75
6509 7575 5.409643 AGCGCATACATTGTTGAGATTAC 57.590 39.130 11.47 0.00 0.00 1.89
6510 7576 4.875536 AGCGCATACATTGTTGAGATTACA 59.124 37.500 11.47 0.00 0.00 2.41
6511 7577 5.007039 AGCGCATACATTGTTGAGATTACAG 59.993 40.000 11.47 0.00 0.00 2.74
6512 7578 5.006649 GCGCATACATTGTTGAGATTACAGA 59.993 40.000 0.30 0.00 0.00 3.41
6513 7579 6.643845 CGCATACATTGTTGAGATTACAGAG 58.356 40.000 0.00 0.00 0.00 3.35
6514 7580 6.476706 CGCATACATTGTTGAGATTACAGAGA 59.523 38.462 0.00 0.00 0.00 3.10
6515 7581 7.306457 CGCATACATTGTTGAGATTACAGAGAG 60.306 40.741 0.00 0.00 0.00 3.20
6516 7582 7.708322 GCATACATTGTTGAGATTACAGAGAGA 59.292 37.037 0.00 0.00 0.00 3.10
6517 7583 9.247126 CATACATTGTTGAGATTACAGAGAGAG 57.753 37.037 0.00 0.00 0.00 3.20
6518 7584 6.638610 ACATTGTTGAGATTACAGAGAGAGG 58.361 40.000 0.00 0.00 0.00 3.69
6519 7585 5.667539 TTGTTGAGATTACAGAGAGAGGG 57.332 43.478 0.00 0.00 0.00 4.30
6520 7586 4.935578 TGTTGAGATTACAGAGAGAGGGA 58.064 43.478 0.00 0.00 0.00 4.20
6521 7587 4.952957 TGTTGAGATTACAGAGAGAGGGAG 59.047 45.833 0.00 0.00 0.00 4.30
6522 7588 5.197451 GTTGAGATTACAGAGAGAGGGAGA 58.803 45.833 0.00 0.00 0.00 3.71
6523 7589 5.661503 TGAGATTACAGAGAGAGGGAGAT 57.338 43.478 0.00 0.00 0.00 2.75
6524 7590 6.771934 TGAGATTACAGAGAGAGGGAGATA 57.228 41.667 0.00 0.00 0.00 1.98
6525 7591 7.341885 TGAGATTACAGAGAGAGGGAGATAT 57.658 40.000 0.00 0.00 0.00 1.63
6526 7592 7.764617 TGAGATTACAGAGAGAGGGAGATATT 58.235 38.462 0.00 0.00 0.00 1.28
6527 7593 7.888021 TGAGATTACAGAGAGAGGGAGATATTC 59.112 40.741 0.00 0.00 0.00 1.75
6528 7594 7.764617 AGATTACAGAGAGAGGGAGATATTCA 58.235 38.462 0.00 0.00 0.00 2.57
6529 7595 8.231007 AGATTACAGAGAGAGGGAGATATTCAA 58.769 37.037 0.00 0.00 0.00 2.69
6530 7596 7.831691 TTACAGAGAGAGGGAGATATTCAAG 57.168 40.000 0.00 0.00 0.00 3.02
6531 7597 5.147032 ACAGAGAGAGGGAGATATTCAAGG 58.853 45.833 0.00 0.00 0.00 3.61
6532 7598 5.103301 ACAGAGAGAGGGAGATATTCAAGGA 60.103 44.000 0.00 0.00 0.00 3.36
6533 7599 5.837979 CAGAGAGAGGGAGATATTCAAGGAA 59.162 44.000 0.00 0.00 0.00 3.36
6534 7600 6.015180 CAGAGAGAGGGAGATATTCAAGGAAG 60.015 46.154 0.00 0.00 0.00 3.46
6535 7601 6.036926 AGAGAGGGAGATATTCAAGGAAGA 57.963 41.667 0.00 0.00 0.00 2.87
6536 7602 6.077322 AGAGAGGGAGATATTCAAGGAAGAG 58.923 44.000 0.00 0.00 0.00 2.85
6537 7603 6.036926 AGAGGGAGATATTCAAGGAAGAGA 57.963 41.667 0.00 0.00 0.00 3.10
6538 7604 6.633062 AGAGGGAGATATTCAAGGAAGAGAT 58.367 40.000 0.00 0.00 0.00 2.75
6539 7605 7.774713 AGAGGGAGATATTCAAGGAAGAGATA 58.225 38.462 0.00 0.00 0.00 1.98
6540 7606 7.895429 AGAGGGAGATATTCAAGGAAGAGATAG 59.105 40.741 0.00 0.00 0.00 2.08
6541 7607 7.774713 AGGGAGATATTCAAGGAAGAGATAGA 58.225 38.462 0.00 0.00 0.00 1.98
6542 7608 8.238060 AGGGAGATATTCAAGGAAGAGATAGAA 58.762 37.037 0.00 0.00 0.00 2.10
6543 7609 8.311109 GGGAGATATTCAAGGAAGAGATAGAAC 58.689 40.741 0.00 0.00 0.00 3.01
6544 7610 9.088987 GGAGATATTCAAGGAAGAGATAGAACT 57.911 37.037 0.00 0.00 0.00 3.01
6547 7613 9.487790 GATATTCAAGGAAGAGATAGAACTTGG 57.512 37.037 0.00 0.00 36.78 3.61
6548 7614 6.935240 TTCAAGGAAGAGATAGAACTTGGA 57.065 37.500 0.00 0.00 36.78 3.53
6549 7615 6.537453 TCAAGGAAGAGATAGAACTTGGAG 57.463 41.667 0.00 0.00 36.78 3.86
6550 7616 6.256819 TCAAGGAAGAGATAGAACTTGGAGA 58.743 40.000 0.00 0.00 36.78 3.71
6551 7617 6.379703 TCAAGGAAGAGATAGAACTTGGAGAG 59.620 42.308 0.00 0.00 36.78 3.20
6552 7618 6.086011 AGGAAGAGATAGAACTTGGAGAGA 57.914 41.667 0.00 0.00 0.00 3.10
6553 7619 6.498538 AGGAAGAGATAGAACTTGGAGAGAA 58.501 40.000 0.00 0.00 0.00 2.87
6554 7620 6.957020 AGGAAGAGATAGAACTTGGAGAGAAA 59.043 38.462 0.00 0.00 0.00 2.52
6555 7621 7.124147 AGGAAGAGATAGAACTTGGAGAGAAAG 59.876 40.741 0.00 0.00 0.00 2.62
6556 7622 6.790232 AGAGATAGAACTTGGAGAGAAAGG 57.210 41.667 0.00 0.00 0.00 3.11
6557 7623 6.498538 AGAGATAGAACTTGGAGAGAAAGGA 58.501 40.000 0.00 0.00 0.00 3.36
6558 7624 6.957020 AGAGATAGAACTTGGAGAGAAAGGAA 59.043 38.462 0.00 0.00 0.00 3.36
6559 7625 7.456269 AGAGATAGAACTTGGAGAGAAAGGAAA 59.544 37.037 0.00 0.00 0.00 3.13
6560 7626 7.978925 AGATAGAACTTGGAGAGAAAGGAAAA 58.021 34.615 0.00 0.00 0.00 2.29
6561 7627 7.880713 AGATAGAACTTGGAGAGAAAGGAAAAC 59.119 37.037 0.00 0.00 0.00 2.43
6562 7628 5.755849 AGAACTTGGAGAGAAAGGAAAACA 58.244 37.500 0.00 0.00 0.00 2.83
6563 7629 6.187682 AGAACTTGGAGAGAAAGGAAAACAA 58.812 36.000 0.00 0.00 0.00 2.83
6564 7630 6.836007 AGAACTTGGAGAGAAAGGAAAACAAT 59.164 34.615 0.00 0.00 0.00 2.71
6565 7631 6.641169 ACTTGGAGAGAAAGGAAAACAATC 57.359 37.500 0.00 0.00 0.00 2.67
6566 7632 6.368805 ACTTGGAGAGAAAGGAAAACAATCT 58.631 36.000 0.00 0.00 0.00 2.40
6567 7633 7.518188 ACTTGGAGAGAAAGGAAAACAATCTA 58.482 34.615 0.00 0.00 0.00 1.98
6568 7634 8.166726 ACTTGGAGAGAAAGGAAAACAATCTAT 58.833 33.333 0.00 0.00 0.00 1.98
6569 7635 8.567285 TTGGAGAGAAAGGAAAACAATCTATC 57.433 34.615 0.00 0.00 0.00 2.08
6570 7636 7.922382 TGGAGAGAAAGGAAAACAATCTATCT 58.078 34.615 0.00 0.00 31.02 1.98
6571 7637 8.043710 TGGAGAGAAAGGAAAACAATCTATCTC 58.956 37.037 0.00 0.00 31.02 2.75
6572 7638 8.264347 GGAGAGAAAGGAAAACAATCTATCTCT 58.736 37.037 0.00 0.00 31.02 3.10
6602 7668 8.760980 ATCTATCTATCCTAACTACCTCATGC 57.239 38.462 0.00 0.00 0.00 4.06
6603 7669 5.906113 ATCTATCCTAACTACCTCATGCG 57.094 43.478 0.00 0.00 0.00 4.73
6604 7670 2.821991 ATCCTAACTACCTCATGCGC 57.178 50.000 0.00 0.00 0.00 6.09
6605 7671 1.480789 TCCTAACTACCTCATGCGCA 58.519 50.000 14.96 14.96 0.00 6.09
6606 7672 1.136305 TCCTAACTACCTCATGCGCAC 59.864 52.381 14.90 0.00 0.00 5.34
6607 7673 1.200483 CTAACTACCTCATGCGCACG 58.800 55.000 14.90 3.71 0.00 5.34
6608 7674 0.179121 TAACTACCTCATGCGCACGG 60.179 55.000 14.90 16.72 0.00 4.94
6609 7675 3.264897 CTACCTCATGCGCACGGC 61.265 66.667 14.90 0.00 43.96 5.68
6610 7676 3.723235 CTACCTCATGCGCACGGCT 62.723 63.158 14.90 7.31 44.05 5.52
6619 7685 3.124270 CGCACGGCTGCAACCATA 61.124 61.111 6.99 0.00 44.50 2.74
6620 7686 2.793946 GCACGGCTGCAACCATAG 59.206 61.111 6.99 0.00 43.62 2.23
6621 7687 2.040544 GCACGGCTGCAACCATAGT 61.041 57.895 6.99 0.00 43.62 2.12
6622 7688 0.742990 GCACGGCTGCAACCATAGTA 60.743 55.000 6.99 0.00 43.62 1.82
6623 7689 1.953559 CACGGCTGCAACCATAGTAT 58.046 50.000 6.99 0.00 0.00 2.12
6624 7690 1.599071 CACGGCTGCAACCATAGTATG 59.401 52.381 6.99 2.90 0.00 2.39
6625 7691 1.209504 ACGGCTGCAACCATAGTATGT 59.790 47.619 6.99 0.00 0.00 2.29
6626 7692 2.288666 CGGCTGCAACCATAGTATGTT 58.711 47.619 6.99 1.54 0.00 2.71
6627 7693 2.287915 CGGCTGCAACCATAGTATGTTC 59.712 50.000 6.99 0.00 0.00 3.18
6628 7694 3.278574 GGCTGCAACCATAGTATGTTCA 58.721 45.455 9.28 1.22 0.00 3.18
6629 7695 3.694072 GGCTGCAACCATAGTATGTTCAA 59.306 43.478 9.28 0.00 0.00 2.69
6630 7696 4.438744 GGCTGCAACCATAGTATGTTCAAC 60.439 45.833 9.28 0.00 0.00 3.18
6631 7697 4.155826 GCTGCAACCATAGTATGTTCAACA 59.844 41.667 9.28 0.00 0.00 3.33
6632 7698 5.621197 TGCAACCATAGTATGTTCAACAC 57.379 39.130 9.28 0.00 0.00 3.32
6633 7699 4.457603 TGCAACCATAGTATGTTCAACACC 59.542 41.667 9.28 0.00 0.00 4.16
6634 7700 4.142469 GCAACCATAGTATGTTCAACACCC 60.142 45.833 9.28 0.00 0.00 4.61
6635 7701 5.253330 CAACCATAGTATGTTCAACACCCT 58.747 41.667 9.28 0.00 0.00 4.34
6636 7702 5.099042 ACCATAGTATGTTCAACACCCTC 57.901 43.478 9.28 0.00 0.00 4.30
6637 7703 4.080526 ACCATAGTATGTTCAACACCCTCC 60.081 45.833 9.28 0.00 0.00 4.30
6638 7704 4.451900 CATAGTATGTTCAACACCCTCCC 58.548 47.826 0.00 0.00 0.00 4.30
6639 7705 1.278127 AGTATGTTCAACACCCTCCCG 59.722 52.381 0.00 0.00 0.00 5.14
6640 7706 1.002773 GTATGTTCAACACCCTCCCGT 59.997 52.381 0.00 0.00 0.00 5.28
6641 7707 1.354101 ATGTTCAACACCCTCCCGTA 58.646 50.000 0.00 0.00 0.00 4.02
6642 7708 1.129917 TGTTCAACACCCTCCCGTAA 58.870 50.000 0.00 0.00 0.00 3.18
6643 7709 1.700739 TGTTCAACACCCTCCCGTAAT 59.299 47.619 0.00 0.00 0.00 1.89
6644 7710 2.289819 TGTTCAACACCCTCCCGTAATC 60.290 50.000 0.00 0.00 0.00 1.75
6645 7711 1.646912 TCAACACCCTCCCGTAATCA 58.353 50.000 0.00 0.00 0.00 2.57
6646 7712 1.276989 TCAACACCCTCCCGTAATCAC 59.723 52.381 0.00 0.00 0.00 3.06
6647 7713 1.002659 CAACACCCTCCCGTAATCACA 59.997 52.381 0.00 0.00 0.00 3.58
6648 7714 1.354101 ACACCCTCCCGTAATCACAA 58.646 50.000 0.00 0.00 0.00 3.33
6649 7715 1.002773 ACACCCTCCCGTAATCACAAC 59.997 52.381 0.00 0.00 0.00 3.32
6650 7716 1.278127 CACCCTCCCGTAATCACAACT 59.722 52.381 0.00 0.00 0.00 3.16
6651 7717 1.982958 ACCCTCCCGTAATCACAACTT 59.017 47.619 0.00 0.00 0.00 2.66
6652 7718 2.027469 ACCCTCCCGTAATCACAACTTC 60.027 50.000 0.00 0.00 0.00 3.01
6653 7719 2.027561 CCCTCCCGTAATCACAACTTCA 60.028 50.000 0.00 0.00 0.00 3.02
6654 7720 3.370527 CCCTCCCGTAATCACAACTTCAT 60.371 47.826 0.00 0.00 0.00 2.57
6655 7721 4.261801 CCTCCCGTAATCACAACTTCATT 58.738 43.478 0.00 0.00 0.00 2.57
6656 7722 5.424757 CCTCCCGTAATCACAACTTCATTA 58.575 41.667 0.00 0.00 0.00 1.90
6657 7723 5.878116 CCTCCCGTAATCACAACTTCATTAA 59.122 40.000 0.00 0.00 0.00 1.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
11 12 4.486503 CTGCCCAGCCTCTCCTGC 62.487 72.222 0.00 0.00 0.00 4.85
12 13 3.007920 ACTGCCCAGCCTCTCCTG 61.008 66.667 0.00 0.00 0.00 3.86
13 14 3.007920 CACTGCCCAGCCTCTCCT 61.008 66.667 0.00 0.00 0.00 3.69
14 15 4.792804 GCACTGCCCAGCCTCTCC 62.793 72.222 0.00 0.00 0.00 3.71
21 22 4.641645 TTCCCACGCACTGCCCAG 62.642 66.667 0.00 0.00 0.00 4.45
22 23 4.641645 CTTCCCACGCACTGCCCA 62.642 66.667 0.00 0.00 0.00 5.36
26 27 3.052082 CAGGCTTCCCACGCACTG 61.052 66.667 0.00 0.00 0.00 3.66
41 42 1.639298 CGCTTCTTTTCTCCCCGCAG 61.639 60.000 0.00 0.00 0.00 5.18
42 43 1.671054 CGCTTCTTTTCTCCCCGCA 60.671 57.895 0.00 0.00 0.00 5.69
43 44 2.399356 CCGCTTCTTTTCTCCCCGC 61.399 63.158 0.00 0.00 0.00 6.13
44 45 2.399356 GCCGCTTCTTTTCTCCCCG 61.399 63.158 0.00 0.00 0.00 5.73
45 46 2.046864 GGCCGCTTCTTTTCTCCCC 61.047 63.158 0.00 0.00 0.00 4.81
46 47 0.893727 TTGGCCGCTTCTTTTCTCCC 60.894 55.000 0.00 0.00 0.00 4.30
47 48 0.958822 TTTGGCCGCTTCTTTTCTCC 59.041 50.000 0.00 0.00 0.00 3.71
48 49 1.880027 TCTTTGGCCGCTTCTTTTCTC 59.120 47.619 0.00 0.00 0.00 2.87
49 50 1.981256 TCTTTGGCCGCTTCTTTTCT 58.019 45.000 0.00 0.00 0.00 2.52
50 51 2.599659 CATCTTTGGCCGCTTCTTTTC 58.400 47.619 0.00 0.00 0.00 2.29
51 52 1.273327 CCATCTTTGGCCGCTTCTTTT 59.727 47.619 0.00 0.00 35.85 2.27
52 53 0.890683 CCATCTTTGGCCGCTTCTTT 59.109 50.000 0.00 0.00 35.85 2.52
53 54 0.038166 TCCATCTTTGGCCGCTTCTT 59.962 50.000 0.00 0.00 43.29 2.52
54 55 0.257039 ATCCATCTTTGGCCGCTTCT 59.743 50.000 0.00 0.00 43.29 2.85
55 56 0.383231 CATCCATCTTTGGCCGCTTC 59.617 55.000 0.00 0.00 43.29 3.86
56 57 1.039233 CCATCCATCTTTGGCCGCTT 61.039 55.000 0.00 0.00 43.29 4.68
57 58 1.454479 CCATCCATCTTTGGCCGCT 60.454 57.895 0.00 0.00 43.29 5.52
58 59 0.825010 ATCCATCCATCTTTGGCCGC 60.825 55.000 0.00 0.00 43.29 6.53
59 60 0.956633 CATCCATCCATCTTTGGCCG 59.043 55.000 0.00 0.00 43.29 6.13
60 61 1.133388 TCCATCCATCCATCTTTGGCC 60.133 52.381 0.00 0.00 43.29 5.36
61 62 2.369983 TCCATCCATCCATCTTTGGC 57.630 50.000 0.00 0.00 43.29 4.52
62 63 4.015084 GCTATCCATCCATCCATCTTTGG 58.985 47.826 0.00 0.00 45.15 3.28
78 79 2.726373 CGACGATGATCACTCGCTATCC 60.726 54.545 20.31 9.20 39.71 2.59
109 117 0.466555 CGGAGGGACGGAGATCTTCT 60.467 60.000 0.00 0.00 0.00 2.85
135 143 0.041090 TGGGGGCTCTGAAAATTCCC 59.959 55.000 0.00 0.00 36.25 3.97
205 241 9.030301 GTGTGATTTTTAGCACTTTTGTAATGT 57.970 29.630 0.00 0.00 36.05 2.71
222 280 7.751768 TTTTTGTTTTCCTTGGTGTGATTTT 57.248 28.000 0.00 0.00 0.00 1.82
246 304 6.432403 TTCCTTTTTCATGGCACCTTTATT 57.568 33.333 0.00 0.00 0.00 1.40
247 305 5.046376 CCTTCCTTTTTCATGGCACCTTTAT 60.046 40.000 0.00 0.00 0.00 1.40
261 319 3.727391 TCTCTCTTTCCCCCTTCCTTTTT 59.273 43.478 0.00 0.00 0.00 1.94
265 323 1.725182 TCTCTCTCTTTCCCCCTTCCT 59.275 52.381 0.00 0.00 0.00 3.36
267 325 3.031013 CTCTCTCTCTCTTTCCCCCTTC 58.969 54.545 0.00 0.00 0.00 3.46
276 334 4.624913 TCCTCTCTCTCTCTCTCTCTCTT 58.375 47.826 0.00 0.00 0.00 2.85
295 375 3.213402 GCCGCTAGCTCGTCTCCT 61.213 66.667 13.93 0.00 38.99 3.69
312 392 1.874231 CCATCAATCTAGCTGCTGCAG 59.126 52.381 24.80 24.80 42.74 4.41
313 393 1.476291 CCCATCAATCTAGCTGCTGCA 60.476 52.381 18.42 0.88 42.74 4.41
319 399 0.769873 CAGGGCCCATCAATCTAGCT 59.230 55.000 27.56 0.00 0.00 3.32
463 550 2.521105 ATCGCCCCAATTACTACGAC 57.479 50.000 0.00 0.00 31.71 4.34
464 551 3.489355 TCTATCGCCCCAATTACTACGA 58.511 45.455 0.00 0.00 0.00 3.43
465 552 3.504906 TCTCTATCGCCCCAATTACTACG 59.495 47.826 0.00 0.00 0.00 3.51
492 579 3.775654 GCGAGGGCACTAGGCTGT 61.776 66.667 4.30 0.00 44.01 4.40
528 619 1.263356 TGGAAACAGTAGGAGACGGG 58.737 55.000 0.00 0.00 35.01 5.28
531 622 2.701107 GCCTTGGAAACAGTAGGAGAC 58.299 52.381 0.00 0.00 40.22 3.36
605 704 1.226267 CGACTCTCTCTGACGCAGC 60.226 63.158 2.45 0.00 0.00 5.25
686 785 1.227380 GTAGTGGCTGCGGATCCTG 60.227 63.158 10.75 4.67 0.00 3.86
1076 1204 2.586635 TGCGTGTGGTGGAACGAC 60.587 61.111 0.00 0.00 46.54 4.34
1251 2047 0.658368 GAGTGCTGCTGCTGATGATG 59.342 55.000 17.00 0.00 40.48 3.07
1252 2048 0.810426 CGAGTGCTGCTGCTGATGAT 60.810 55.000 17.00 0.00 40.48 2.45
1253 2049 1.447314 CGAGTGCTGCTGCTGATGA 60.447 57.895 17.00 0.00 40.48 2.92
1299 2095 2.604299 CTAGGGTTAGGGTTGCCGCC 62.604 65.000 0.00 0.00 0.00 6.13
1490 2286 1.669115 CCAGGTGCTCTTGACGTGG 60.669 63.158 0.00 0.00 41.56 4.94
1586 2385 1.517475 GAGGCGAGGCTTCTTCGAC 60.517 63.158 0.00 0.00 31.81 4.20
1694 2493 1.197264 GCGGCGTGGTTACAAAACATA 59.803 47.619 9.37 0.00 37.34 2.29
1695 2494 0.039888 GCGGCGTGGTTACAAAACAT 60.040 50.000 9.37 0.00 37.34 2.71
1696 2495 1.355916 GCGGCGTGGTTACAAAACA 59.644 52.632 9.37 0.00 37.34 2.83
1697 2496 1.370778 GGCGGCGTGGTTACAAAAC 60.371 57.895 9.37 0.00 34.66 2.43
1698 2497 2.553727 GGGCGGCGTGGTTACAAAA 61.554 57.895 9.37 0.00 0.00 2.44
1729 2533 0.365523 CTGTCGCGAATTACACCACG 59.634 55.000 12.06 0.00 0.00 4.94
1730 2534 1.425412 ACTGTCGCGAATTACACCAC 58.575 50.000 12.06 0.00 0.00 4.16
1732 2536 1.058695 CGAACTGTCGCGAATTACACC 59.941 52.381 12.06 0.00 41.08 4.16
1733 2537 2.398903 CGAACTGTCGCGAATTACAC 57.601 50.000 12.06 0.00 41.08 2.90
1763 2585 1.070601 TCTGCAGCACACACACATAGT 59.929 47.619 9.47 0.00 0.00 2.12
1769 2595 3.271586 GCGTCTGCAGCACACACA 61.272 61.111 9.47 0.00 42.15 3.72
1770 2596 4.360027 CGCGTCTGCAGCACACAC 62.360 66.667 9.47 0.00 42.97 3.82
1771 2597 4.889856 ACGCGTCTGCAGCACACA 62.890 61.111 5.58 0.00 42.97 3.72
1772 2598 4.064491 GACGCGTCTGCAGCACAC 62.064 66.667 31.12 0.74 42.97 3.82
2551 3434 2.177669 CCCCTGAACACATCCCCATAAT 59.822 50.000 0.00 0.00 0.00 1.28
2552 3435 1.568597 CCCCTGAACACATCCCCATAA 59.431 52.381 0.00 0.00 0.00 1.90
2665 3548 7.724287 TGCTCAGCCTATCATGATAATCTATC 58.276 38.462 16.08 8.62 35.74 2.08
2666 3549 7.564292 TCTGCTCAGCCTATCATGATAATCTAT 59.436 37.037 16.08 0.00 0.00 1.98
2667 3550 6.894103 TCTGCTCAGCCTATCATGATAATCTA 59.106 38.462 16.08 0.00 0.00 1.98
2668 3551 5.720520 TCTGCTCAGCCTATCATGATAATCT 59.279 40.000 16.08 12.34 0.00 2.40
2709 3592 0.381801 AACCAAGCAAGCGAGTGTTG 59.618 50.000 0.00 0.00 0.00 3.33
2717 3600 1.683385 AGGAGTGAAAACCAAGCAAGC 59.317 47.619 0.00 0.00 0.00 4.01
2727 3610 0.383949 GCCACGCAAAGGAGTGAAAA 59.616 50.000 0.06 0.00 46.33 2.29
2792 3675 1.903877 AAGGGTGCTCCGATGAGTGG 61.904 60.000 0.00 0.00 40.95 4.00
2840 3723 2.102588 CCTTCAATCCTACCTACCCGTG 59.897 54.545 0.00 0.00 0.00 4.94
2883 3766 1.938016 GCACAAAGCCAATGCCAAGAG 60.938 52.381 0.00 0.00 38.69 2.85
2913 3796 5.443283 TCCAATGCAATTAGAAGATGCTCT 58.557 37.500 0.00 0.00 40.66 4.09
2960 3843 3.127376 TCATCACATGCAGCATTACACAC 59.873 43.478 4.69 0.00 0.00 3.82
3024 3907 9.667107 ACATAGTTTAACATGTAGCATAAGTGT 57.333 29.630 0.00 0.00 33.66 3.55
3031 3914 9.309516 GCTAGTAACATAGTTTAACATGTAGCA 57.690 33.333 17.59 0.00 34.98 3.49
3032 3915 9.309516 TGCTAGTAACATAGTTTAACATGTAGC 57.690 33.333 16.65 16.65 35.24 3.58
3053 3941 9.894783 CCAATTATCAAAAGATGAAGATGCTAG 57.105 33.333 0.00 0.00 42.54 3.42
3054 3942 8.355169 GCCAATTATCAAAAGATGAAGATGCTA 58.645 33.333 0.00 0.00 42.54 3.49
3055 3943 7.147794 TGCCAATTATCAAAAGATGAAGATGCT 60.148 33.333 0.00 0.00 42.54 3.79
3091 3979 3.117322 TCCTCTAGCCTCTTCTACAGCAT 60.117 47.826 0.00 0.00 0.00 3.79
3092 3980 2.242452 TCCTCTAGCCTCTTCTACAGCA 59.758 50.000 0.00 0.00 0.00 4.41
3093 3981 2.884639 CTCCTCTAGCCTCTTCTACAGC 59.115 54.545 0.00 0.00 0.00 4.40
3094 3982 4.431416 TCTCCTCTAGCCTCTTCTACAG 57.569 50.000 0.00 0.00 0.00 2.74
3095 3983 4.724399 CATCTCCTCTAGCCTCTTCTACA 58.276 47.826 0.00 0.00 0.00 2.74
3096 3984 3.506067 GCATCTCCTCTAGCCTCTTCTAC 59.494 52.174 0.00 0.00 0.00 2.59
3100 3994 2.468301 TGCATCTCCTCTAGCCTCTT 57.532 50.000 0.00 0.00 0.00 2.85
3141 4035 2.821378 CACAGGAAGCAACCATGAATGA 59.179 45.455 0.00 0.00 0.00 2.57
3142 4036 2.673043 GCACAGGAAGCAACCATGAATG 60.673 50.000 0.00 0.00 0.00 2.67
3143 4037 1.547372 GCACAGGAAGCAACCATGAAT 59.453 47.619 0.00 0.00 0.00 2.57
3144 4038 0.961019 GCACAGGAAGCAACCATGAA 59.039 50.000 0.00 0.00 0.00 2.57
3173 4067 2.103153 TGGCTGGTAGGATAGGAAGG 57.897 55.000 0.00 0.00 0.00 3.46
3175 4069 2.338809 CCATGGCTGGTAGGATAGGAA 58.661 52.381 0.00 0.00 37.79 3.36
3347 4241 1.812571 CCGACCAAGATTTTCACCCAG 59.187 52.381 0.00 0.00 0.00 4.45
3437 4334 2.608016 GCTGATGAGCCATGCATGAATG 60.608 50.000 28.31 12.47 39.57 2.67
3438 4335 1.613925 GCTGATGAGCCATGCATGAAT 59.386 47.619 28.31 15.43 39.57 2.57
3440 4337 2.715536 GCTGATGAGCCATGCATGA 58.284 52.632 28.31 8.35 39.57 3.07
3481 4381 3.004944 GCGACTAACACCAATCCCAAAAA 59.995 43.478 0.00 0.00 0.00 1.94
3482 4382 2.554893 GCGACTAACACCAATCCCAAAA 59.445 45.455 0.00 0.00 0.00 2.44
3483 4383 2.156098 GCGACTAACACCAATCCCAAA 58.844 47.619 0.00 0.00 0.00 3.28
3547 4448 3.330853 GACGGACGCCATCATCGC 61.331 66.667 0.00 0.00 0.00 4.58
3552 4453 1.883084 GACATGGACGGACGCCATC 60.883 63.158 14.60 5.72 44.08 3.51
3701 4602 4.003648 AGCAGGTGTACAATTAGTCAAGC 58.996 43.478 0.00 0.00 0.00 4.01
3714 4615 0.247460 CAGTAGCAGCAGCAGGTGTA 59.753 55.000 10.14 0.00 44.89 2.90
3750 4651 2.490903 CAGAAACATCAGGCAGGAAAGG 59.509 50.000 0.00 0.00 0.00 3.11
3755 4656 2.229784 GGAAACAGAAACATCAGGCAGG 59.770 50.000 0.00 0.00 0.00 4.85
3844 4745 9.883142 TGACAAAATTCTGGTGTTAAATTCTTT 57.117 25.926 0.00 0.00 0.00 2.52
3848 4749 8.558700 GCAATGACAAAATTCTGGTGTTAAATT 58.441 29.630 0.00 0.00 0.00 1.82
4039 4943 5.807520 CGTGACAGAAGTTAGTAGCATTGAT 59.192 40.000 0.00 0.00 0.00 2.57
4041 4945 4.923871 ACGTGACAGAAGTTAGTAGCATTG 59.076 41.667 0.00 0.00 0.00 2.82
4042 4946 5.135508 ACGTGACAGAAGTTAGTAGCATT 57.864 39.130 0.00 0.00 0.00 3.56
4133 5041 7.157347 GCTAGTCATCAATTAGATCACCATCA 58.843 38.462 0.00 0.00 33.72 3.07
4167 5075 5.205056 GGGATTAACAAATGTCACCCCATA 58.795 41.667 0.00 0.00 0.00 2.74
4171 5079 3.436243 TGGGGATTAACAAATGTCACCC 58.564 45.455 0.00 0.00 33.11 4.61
4230 5138 5.163513 CAAGACCAAGTTGATGCCATAAAC 58.836 41.667 3.87 0.00 0.00 2.01
4246 5155 5.181811 CAGCAAGTCATTAATCACAAGACCA 59.818 40.000 0.00 0.00 0.00 4.02
4250 5159 6.245115 TCACAGCAAGTCATTAATCACAAG 57.755 37.500 0.00 0.00 0.00 3.16
4299 5208 9.627123 TCAACCGATTAATCCTTTTCATCTATT 57.373 29.630 9.87 0.00 0.00 1.73
4316 5225 4.385358 ACAAAAGTTGCTTCAACCGATT 57.615 36.364 6.12 0.00 44.49 3.34
4344 5253 9.965824 AAGTTAGCAATCCCAATATTTTAATCG 57.034 29.630 0.00 0.00 0.00 3.34
4380 5299 1.304381 GGCTTCCCAAGTGCATGGA 60.304 57.895 7.97 0.64 43.54 3.41
4438 5357 7.724506 TCACACCCAGGTTATAAACAAACATAA 59.275 33.333 2.78 0.00 0.00 1.90
4620 5539 5.245075 ACTTCAAAAGGGAACAAAGACAACA 59.755 36.000 0.00 0.00 0.00 3.33
4621 5540 5.720202 ACTTCAAAAGGGAACAAAGACAAC 58.280 37.500 0.00 0.00 0.00 3.32
4702 5627 9.417561 ACCATAGCTAGTATACTAACACAGAAA 57.582 33.333 13.51 0.00 0.00 2.52
4822 5762 7.329226 CCAAGTTAGCATCAATGATTTTTCGTT 59.671 33.333 0.00 0.00 0.00 3.85
4891 5831 6.188407 AGGAATAGTCAGCAGTCTACACTAA 58.812 40.000 0.00 0.00 0.00 2.24
4914 5854 9.014297 ACATATCACCAAGAAGTTAAGGAAAAG 57.986 33.333 0.00 0.00 0.00 2.27
4928 5868 5.311265 AGCCATCATACACATATCACCAAG 58.689 41.667 0.00 0.00 0.00 3.61
4943 5883 8.098963 ACTATGATATCCACATAAGCCATCAT 57.901 34.615 0.00 0.00 36.11 2.45
4944 5884 7.401204 AGACTATGATATCCACATAAGCCATCA 59.599 37.037 0.00 0.00 31.26 3.07
4949 5889 8.839310 AACAAGACTATGATATCCACATAAGC 57.161 34.615 0.00 0.00 31.26 3.09
4967 5907 4.610945 ACAGCAGCAATACAAAACAAGAC 58.389 39.130 0.00 0.00 0.00 3.01
4976 5916 1.347378 TGACTGGACAGCAGCAATACA 59.653 47.619 0.00 0.00 0.00 2.29
5021 5963 4.574674 TCAATTGTCAGAATGGCTAGGT 57.425 40.909 5.13 0.00 44.57 3.08
5041 5983 7.868415 AGAAGCTCAACGGTTGAACTATATATC 59.132 37.037 22.86 16.90 39.58 1.63
5051 5993 2.400399 CGTTAGAAGCTCAACGGTTGA 58.600 47.619 21.30 21.30 42.82 3.18
5055 5997 0.669318 TGGCGTTAGAAGCTCAACGG 60.669 55.000 22.06 9.98 45.75 4.44
5109 6051 9.817809 TTAGAAGCAATATTAACTACTCAGTGG 57.182 33.333 0.00 0.00 34.36 4.00
5183 6126 0.399806 ACCCAACAAAATGCACCCCT 60.400 50.000 0.00 0.00 0.00 4.79
5250 6193 1.999648 AAAAGCTTCTGGTGCCATCA 58.000 45.000 0.00 0.00 0.00 3.07
5305 6248 7.329962 CACAATAATGAGCAAATGTCACATGTT 59.670 33.333 0.00 0.00 0.00 2.71
5336 6279 2.632537 ACCTAACCATCAGTGTCCCTT 58.367 47.619 0.00 0.00 0.00 3.95
5366 6309 7.274447 TGTAAAGAACGTAAATATACCTGGGG 58.726 38.462 0.00 0.00 0.00 4.96
5407 6350 9.760077 CTATATAAACGTTTTGGGACTACAGAT 57.240 33.333 20.19 4.39 0.00 2.90
5527 6534 4.665833 AAATGACATGCCCATGATCTTG 57.334 40.909 14.69 1.60 41.20 3.02
5560 6568 7.439655 GCAAAGATACTACCAAATACAGAGGAG 59.560 40.741 0.00 0.00 0.00 3.69
5570 6578 6.013379 TGGAAATGGCAAAGATACTACCAAA 58.987 36.000 0.00 0.00 33.30 3.28
5627 6635 6.979465 TCATTTTGAGCACAAACATCATACA 58.021 32.000 8.93 0.00 44.22 2.29
5660 6669 1.215173 TCCAGCATATTCCCAACCAGG 59.785 52.381 0.00 0.00 37.03 4.45
5665 6674 2.025037 AGCAACTCCAGCATATTCCCAA 60.025 45.455 0.00 0.00 0.00 4.12
5667 6676 2.355010 AGCAACTCCAGCATATTCCC 57.645 50.000 0.00 0.00 0.00 3.97
5722 6731 9.400638 CGCTCTTATATTACTTTACAGAAGGAG 57.599 37.037 0.00 0.00 0.00 3.69
5723 6732 8.910944 ACGCTCTTATATTACTTTACAGAAGGA 58.089 33.333 0.00 0.00 0.00 3.36
5724 6733 9.530633 AACGCTCTTATATTACTTTACAGAAGG 57.469 33.333 0.00 0.00 0.00 3.46
5739 6748 9.775854 ACTACTAGTGATCTAAACGCTCTTATA 57.224 33.333 5.39 0.00 0.00 0.98
5740 6749 8.680039 ACTACTAGTGATCTAAACGCTCTTAT 57.320 34.615 5.39 0.00 0.00 1.73
5757 6766 8.680039 ATAAGAGCGTTTAGATCACTACTAGT 57.320 34.615 0.00 0.00 37.82 2.57
5768 6777 9.241317 CCGTAAAGAATTATAAGAGCGTTTAGA 57.759 33.333 0.00 0.00 0.00 2.10
5769 6778 9.241317 TCCGTAAAGAATTATAAGAGCGTTTAG 57.759 33.333 0.00 0.00 0.00 1.85
5770 6779 9.241317 CTCCGTAAAGAATTATAAGAGCGTTTA 57.759 33.333 0.00 0.00 0.00 2.01
5771 6780 7.224167 CCTCCGTAAAGAATTATAAGAGCGTTT 59.776 37.037 0.00 0.00 0.00 3.60
5772 6781 6.700520 CCTCCGTAAAGAATTATAAGAGCGTT 59.299 38.462 0.00 0.00 0.00 4.84
5773 6782 6.214399 CCTCCGTAAAGAATTATAAGAGCGT 58.786 40.000 0.00 0.00 0.00 5.07
5774 6783 5.634020 CCCTCCGTAAAGAATTATAAGAGCG 59.366 44.000 0.00 0.00 0.00 5.03
5775 6784 6.756221 TCCCTCCGTAAAGAATTATAAGAGC 58.244 40.000 0.00 0.00 0.00 4.09
5776 6785 7.953752 ACTCCCTCCGTAAAGAATTATAAGAG 58.046 38.462 0.00 0.00 0.00 2.85
5777 6786 7.909485 ACTCCCTCCGTAAAGAATTATAAGA 57.091 36.000 0.00 0.00 0.00 2.10
5778 6787 8.858094 AGTACTCCCTCCGTAAAGAATTATAAG 58.142 37.037 0.00 0.00 0.00 1.73
5779 6788 8.773033 AGTACTCCCTCCGTAAAGAATTATAA 57.227 34.615 0.00 0.00 0.00 0.98
5780 6789 8.636213 CAAGTACTCCCTCCGTAAAGAATTATA 58.364 37.037 0.00 0.00 0.00 0.98
5781 6790 7.343833 TCAAGTACTCCCTCCGTAAAGAATTAT 59.656 37.037 0.00 0.00 0.00 1.28
5782 6791 6.664816 TCAAGTACTCCCTCCGTAAAGAATTA 59.335 38.462 0.00 0.00 0.00 1.40
5783 6792 5.482878 TCAAGTACTCCCTCCGTAAAGAATT 59.517 40.000 0.00 0.00 0.00 2.17
5784 6793 5.021458 TCAAGTACTCCCTCCGTAAAGAAT 58.979 41.667 0.00 0.00 0.00 2.40
5785 6794 4.410099 TCAAGTACTCCCTCCGTAAAGAA 58.590 43.478 0.00 0.00 0.00 2.52
5786 6795 4.015084 CTCAAGTACTCCCTCCGTAAAGA 58.985 47.826 0.00 0.00 0.00 2.52
5787 6796 4.015084 TCTCAAGTACTCCCTCCGTAAAG 58.985 47.826 0.00 0.00 0.00 1.85
5788 6797 4.038271 TCTCAAGTACTCCCTCCGTAAA 57.962 45.455 0.00 0.00 0.00 2.01
5789 6798 3.726557 TCTCAAGTACTCCCTCCGTAA 57.273 47.619 0.00 0.00 0.00 3.18
5790 6799 3.552875 CATCTCAAGTACTCCCTCCGTA 58.447 50.000 0.00 0.00 0.00 4.02
5791 6800 2.379972 CATCTCAAGTACTCCCTCCGT 58.620 52.381 0.00 0.00 0.00 4.69
5792 6801 1.067821 GCATCTCAAGTACTCCCTCCG 59.932 57.143 0.00 0.00 0.00 4.63
5793 6802 2.111384 TGCATCTCAAGTACTCCCTCC 58.889 52.381 0.00 0.00 0.00 4.30
5794 6803 2.763448 AGTGCATCTCAAGTACTCCCTC 59.237 50.000 0.00 0.00 0.00 4.30
5795 6804 2.826488 AGTGCATCTCAAGTACTCCCT 58.174 47.619 0.00 0.00 0.00 4.20
5796 6805 3.954904 TCTAGTGCATCTCAAGTACTCCC 59.045 47.826 0.00 0.00 0.00 4.30
5797 6806 5.068460 ACATCTAGTGCATCTCAAGTACTCC 59.932 44.000 0.00 0.00 0.00 3.85
5798 6807 6.142818 ACATCTAGTGCATCTCAAGTACTC 57.857 41.667 0.00 0.00 0.00 2.59
5799 6808 6.603599 TGTACATCTAGTGCATCTCAAGTACT 59.396 38.462 15.47 0.00 37.96 2.73
5800 6809 6.796426 TGTACATCTAGTGCATCTCAAGTAC 58.204 40.000 0.00 1.06 37.96 2.73
5857 6866 4.604976 GTCTGCATAATCAATCCAACTGC 58.395 43.478 0.00 0.00 0.00 4.40
6016 7025 5.655532 GCCCATCATTTCAGGAAGCATATAT 59.344 40.000 0.00 0.00 0.00 0.86
6017 7026 5.012239 GCCCATCATTTCAGGAAGCATATA 58.988 41.667 0.00 0.00 0.00 0.86
6132 7141 0.378257 ACAACAAGAGCAGCACAACG 59.622 50.000 0.00 0.00 0.00 4.10
6206 7215 1.949525 GACAGCTTTTTGTCTCTGCCA 59.050 47.619 0.00 0.00 43.23 4.92
6260 7269 4.079253 GACACCCCTCATTTAAGCAAAGA 58.921 43.478 0.00 0.00 0.00 2.52
6262 7271 2.817258 CGACACCCCTCATTTAAGCAAA 59.183 45.455 0.00 0.00 0.00 3.68
6308 7317 5.570234 TCTTTTACTTTTCGTTGGCACTT 57.430 34.783 0.00 0.00 0.00 3.16
6353 7419 2.731217 CAAGGCTGCAAACACTACAAC 58.269 47.619 0.50 0.00 0.00 3.32
6400 7466 1.275010 TCCAGCTATCGCACAACTCAA 59.725 47.619 0.00 0.00 39.10 3.02
6406 7472 0.037697 ACGTTTCCAGCTATCGCACA 60.038 50.000 0.00 0.00 39.10 4.57
6407 7473 1.076332 AACGTTTCCAGCTATCGCAC 58.924 50.000 0.00 0.00 39.10 5.34
6408 7474 1.803334 AAACGTTTCCAGCTATCGCA 58.197 45.000 7.96 0.00 39.10 5.10
6409 7475 2.894307 AAAACGTTTCCAGCTATCGC 57.106 45.000 15.01 0.00 0.00 4.58
6410 7476 3.242316 GGCTAAAACGTTTCCAGCTATCG 60.242 47.826 30.63 9.57 32.10 2.92
6411 7477 3.939592 AGGCTAAAACGTTTCCAGCTATC 59.060 43.478 30.63 21.04 32.10 2.08
6412 7478 3.689649 CAGGCTAAAACGTTTCCAGCTAT 59.310 43.478 30.63 22.41 32.10 2.97
6413 7479 3.071479 CAGGCTAAAACGTTTCCAGCTA 58.929 45.455 30.63 15.01 32.10 3.32
6414 7480 1.880027 CAGGCTAAAACGTTTCCAGCT 59.120 47.619 30.63 20.64 32.10 4.24
6415 7481 1.607148 ACAGGCTAAAACGTTTCCAGC 59.393 47.619 27.17 27.17 0.00 4.85
6416 7482 3.314080 TCAACAGGCTAAAACGTTTCCAG 59.686 43.478 15.01 14.98 0.00 3.86
6417 7483 3.280295 TCAACAGGCTAAAACGTTTCCA 58.720 40.909 15.01 4.58 0.00 3.53
6418 7484 3.304458 CCTCAACAGGCTAAAACGTTTCC 60.304 47.826 15.01 11.45 30.98 3.13
6419 7485 3.885358 CCTCAACAGGCTAAAACGTTTC 58.115 45.455 15.01 1.53 30.98 2.78
6420 7486 3.982576 CCTCAACAGGCTAAAACGTTT 57.017 42.857 7.96 7.96 30.98 3.60
6431 7497 4.760047 CCCGTCGGCCTCAACAGG 62.760 72.222 5.50 2.87 43.82 4.00
6432 7498 3.530910 AACCCGTCGGCCTCAACAG 62.531 63.158 5.50 0.00 0.00 3.16
6433 7499 3.524648 GAACCCGTCGGCCTCAACA 62.525 63.158 5.50 0.00 0.00 3.33
6434 7500 2.741211 GAACCCGTCGGCCTCAAC 60.741 66.667 5.50 0.00 0.00 3.18
6435 7501 2.589157 ATGAACCCGTCGGCCTCAA 61.589 57.895 15.10 2.83 30.25 3.02
6436 7502 3.000819 ATGAACCCGTCGGCCTCA 61.001 61.111 5.50 10.75 0.00 3.86
6437 7503 2.511600 CATGAACCCGTCGGCCTC 60.512 66.667 5.50 4.79 0.00 4.70
6438 7504 1.546589 TAACATGAACCCGTCGGCCT 61.547 55.000 5.50 0.00 0.00 5.19
6439 7505 0.674269 TTAACATGAACCCGTCGGCC 60.674 55.000 5.50 0.00 0.00 6.13
6440 7506 1.158434 TTTAACATGAACCCGTCGGC 58.842 50.000 5.50 0.00 0.00 5.54
6441 7507 4.435425 TCTATTTAACATGAACCCGTCGG 58.565 43.478 3.60 3.60 0.00 4.79
6442 7508 5.107133 ACTCTATTTAACATGAACCCGTCG 58.893 41.667 0.00 0.00 0.00 5.12
6443 7509 6.183360 CCAACTCTATTTAACATGAACCCGTC 60.183 42.308 0.00 0.00 0.00 4.79
6444 7510 5.646360 CCAACTCTATTTAACATGAACCCGT 59.354 40.000 0.00 0.00 0.00 5.28
6445 7511 5.065988 CCCAACTCTATTTAACATGAACCCG 59.934 44.000 0.00 0.00 0.00 5.28
6446 7512 5.359860 CCCCAACTCTATTTAACATGAACCC 59.640 44.000 0.00 0.00 0.00 4.11
6447 7513 5.163550 GCCCCAACTCTATTTAACATGAACC 60.164 44.000 0.00 0.00 0.00 3.62
6448 7514 5.448632 CGCCCCAACTCTATTTAACATGAAC 60.449 44.000 0.00 0.00 0.00 3.18
6449 7515 4.638421 CGCCCCAACTCTATTTAACATGAA 59.362 41.667 0.00 0.00 0.00 2.57
6450 7516 4.196193 CGCCCCAACTCTATTTAACATGA 58.804 43.478 0.00 0.00 0.00 3.07
6451 7517 3.243068 GCGCCCCAACTCTATTTAACATG 60.243 47.826 0.00 0.00 0.00 3.21
6452 7518 2.949644 GCGCCCCAACTCTATTTAACAT 59.050 45.455 0.00 0.00 0.00 2.71
6453 7519 2.290387 TGCGCCCCAACTCTATTTAACA 60.290 45.455 4.18 0.00 0.00 2.41
6454 7520 2.096980 GTGCGCCCCAACTCTATTTAAC 59.903 50.000 4.18 0.00 0.00 2.01
6455 7521 2.361789 GTGCGCCCCAACTCTATTTAA 58.638 47.619 4.18 0.00 0.00 1.52
6456 7522 1.407712 GGTGCGCCCCAACTCTATTTA 60.408 52.381 3.18 0.00 0.00 1.40
6457 7523 0.679960 GGTGCGCCCCAACTCTATTT 60.680 55.000 3.18 0.00 0.00 1.40
6458 7524 1.077716 GGTGCGCCCCAACTCTATT 60.078 57.895 3.18 0.00 0.00 1.73
6459 7525 1.995626 AGGTGCGCCCCAACTCTAT 60.996 57.895 12.68 0.00 36.55 1.98
6460 7526 2.606519 AGGTGCGCCCCAACTCTA 60.607 61.111 12.68 0.00 36.55 2.43
6469 7535 3.338275 TATGGTTGGGAGGTGCGCC 62.338 63.158 8.71 8.71 0.00 6.53
6470 7536 1.819632 CTATGGTTGGGAGGTGCGC 60.820 63.158 0.00 0.00 0.00 6.09
6471 7537 1.819632 GCTATGGTTGGGAGGTGCG 60.820 63.158 0.00 0.00 0.00 5.34
6472 7538 1.819632 CGCTATGGTTGGGAGGTGC 60.820 63.158 0.00 0.00 0.00 5.01
6473 7539 1.819632 GCGCTATGGTTGGGAGGTG 60.820 63.158 0.00 0.00 0.00 4.00
6474 7540 1.635817 ATGCGCTATGGTTGGGAGGT 61.636 55.000 9.73 0.00 0.00 3.85
6475 7541 0.396435 TATGCGCTATGGTTGGGAGG 59.604 55.000 9.73 0.00 0.00 4.30
6476 7542 1.202639 TGTATGCGCTATGGTTGGGAG 60.203 52.381 9.73 0.00 0.00 4.30
6477 7543 0.833949 TGTATGCGCTATGGTTGGGA 59.166 50.000 9.73 0.00 0.00 4.37
6478 7544 1.896220 ATGTATGCGCTATGGTTGGG 58.104 50.000 9.73 0.00 0.00 4.12
6479 7545 2.618241 ACAATGTATGCGCTATGGTTGG 59.382 45.455 9.73 0.00 0.00 3.77
6480 7546 3.969117 ACAATGTATGCGCTATGGTTG 57.031 42.857 9.73 11.05 0.00 3.77
6481 7547 3.944650 TCAACAATGTATGCGCTATGGTT 59.055 39.130 9.73 5.28 0.00 3.67
6482 7548 3.540617 TCAACAATGTATGCGCTATGGT 58.459 40.909 9.73 0.00 0.00 3.55
6483 7549 3.809279 TCTCAACAATGTATGCGCTATGG 59.191 43.478 9.73 0.00 0.00 2.74
6484 7550 5.602458 ATCTCAACAATGTATGCGCTATG 57.398 39.130 9.73 0.98 0.00 2.23
6485 7551 6.705825 TGTAATCTCAACAATGTATGCGCTAT 59.294 34.615 9.73 3.00 0.00 2.97
6486 7552 6.045955 TGTAATCTCAACAATGTATGCGCTA 58.954 36.000 9.73 0.00 0.00 4.26
6487 7553 4.875536 TGTAATCTCAACAATGTATGCGCT 59.124 37.500 9.73 0.00 0.00 5.92
6488 7554 5.006649 TCTGTAATCTCAACAATGTATGCGC 59.993 40.000 0.00 0.00 0.00 6.09
6489 7555 6.476706 TCTCTGTAATCTCAACAATGTATGCG 59.523 38.462 0.00 0.00 0.00 4.73
6490 7556 7.708322 TCTCTCTGTAATCTCAACAATGTATGC 59.292 37.037 0.00 0.00 0.00 3.14
6491 7557 9.247126 CTCTCTCTGTAATCTCAACAATGTATG 57.753 37.037 0.00 0.00 0.00 2.39
6492 7558 8.420222 CCTCTCTCTGTAATCTCAACAATGTAT 58.580 37.037 0.00 0.00 0.00 2.29
6493 7559 7.147828 CCCTCTCTCTGTAATCTCAACAATGTA 60.148 40.741 0.00 0.00 0.00 2.29
6494 7560 6.351711 CCCTCTCTCTGTAATCTCAACAATGT 60.352 42.308 0.00 0.00 0.00 2.71
6495 7561 6.047870 CCCTCTCTCTGTAATCTCAACAATG 58.952 44.000 0.00 0.00 0.00 2.82
6496 7562 5.960811 TCCCTCTCTCTGTAATCTCAACAAT 59.039 40.000 0.00 0.00 0.00 2.71
6497 7563 5.333581 TCCCTCTCTCTGTAATCTCAACAA 58.666 41.667 0.00 0.00 0.00 2.83
6498 7564 4.935578 TCCCTCTCTCTGTAATCTCAACA 58.064 43.478 0.00 0.00 0.00 3.33
6499 7565 5.197451 TCTCCCTCTCTCTGTAATCTCAAC 58.803 45.833 0.00 0.00 0.00 3.18
6500 7566 5.458451 TCTCCCTCTCTCTGTAATCTCAA 57.542 43.478 0.00 0.00 0.00 3.02
6501 7567 5.661503 ATCTCCCTCTCTCTGTAATCTCA 57.338 43.478 0.00 0.00 0.00 3.27
6502 7568 7.888021 TGAATATCTCCCTCTCTCTGTAATCTC 59.112 40.741 0.00 0.00 0.00 2.75
6503 7569 7.764617 TGAATATCTCCCTCTCTCTGTAATCT 58.235 38.462 0.00 0.00 0.00 2.40
6504 7570 8.415950 TTGAATATCTCCCTCTCTCTGTAATC 57.584 38.462 0.00 0.00 0.00 1.75
6505 7571 7.454380 CCTTGAATATCTCCCTCTCTCTGTAAT 59.546 40.741 0.00 0.00 0.00 1.89
6506 7572 6.780031 CCTTGAATATCTCCCTCTCTCTGTAA 59.220 42.308 0.00 0.00 0.00 2.41
6507 7573 6.103353 TCCTTGAATATCTCCCTCTCTCTGTA 59.897 42.308 0.00 0.00 0.00 2.74
6508 7574 5.103301 TCCTTGAATATCTCCCTCTCTCTGT 60.103 44.000 0.00 0.00 0.00 3.41
6509 7575 5.392995 TCCTTGAATATCTCCCTCTCTCTG 58.607 45.833 0.00 0.00 0.00 3.35
6510 7576 5.678142 TCCTTGAATATCTCCCTCTCTCT 57.322 43.478 0.00 0.00 0.00 3.10
6511 7577 6.074648 TCTTCCTTGAATATCTCCCTCTCTC 58.925 44.000 0.00 0.00 0.00 3.20
6512 7578 6.036926 TCTTCCTTGAATATCTCCCTCTCT 57.963 41.667 0.00 0.00 0.00 3.10
6513 7579 6.074648 TCTCTTCCTTGAATATCTCCCTCTC 58.925 44.000 0.00 0.00 0.00 3.20
6514 7580 6.036926 TCTCTTCCTTGAATATCTCCCTCT 57.963 41.667 0.00 0.00 0.00 3.69
6515 7581 6.933514 ATCTCTTCCTTGAATATCTCCCTC 57.066 41.667 0.00 0.00 0.00 4.30
6516 7582 7.774713 TCTATCTCTTCCTTGAATATCTCCCT 58.225 38.462 0.00 0.00 0.00 4.20
6517 7583 8.311109 GTTCTATCTCTTCCTTGAATATCTCCC 58.689 40.741 0.00 0.00 0.00 4.30
6518 7584 9.088987 AGTTCTATCTCTTCCTTGAATATCTCC 57.911 37.037 0.00 0.00 0.00 3.71
6521 7587 9.487790 CCAAGTTCTATCTCTTCCTTGAATATC 57.512 37.037 0.00 0.00 32.96 1.63
6522 7588 9.218525 TCCAAGTTCTATCTCTTCCTTGAATAT 57.781 33.333 0.00 0.00 32.96 1.28
6523 7589 8.609617 TCCAAGTTCTATCTCTTCCTTGAATA 57.390 34.615 0.00 0.00 32.96 1.75
6524 7590 7.401493 TCTCCAAGTTCTATCTCTTCCTTGAAT 59.599 37.037 0.00 0.00 32.96 2.57
6525 7591 6.726299 TCTCCAAGTTCTATCTCTTCCTTGAA 59.274 38.462 0.00 0.00 32.96 2.69
6526 7592 6.256819 TCTCCAAGTTCTATCTCTTCCTTGA 58.743 40.000 0.00 0.00 32.96 3.02
6527 7593 6.379703 TCTCTCCAAGTTCTATCTCTTCCTTG 59.620 42.308 0.00 0.00 0.00 3.61
6528 7594 6.498538 TCTCTCCAAGTTCTATCTCTTCCTT 58.501 40.000 0.00 0.00 0.00 3.36
6529 7595 6.086011 TCTCTCCAAGTTCTATCTCTTCCT 57.914 41.667 0.00 0.00 0.00 3.36
6530 7596 6.783708 TTCTCTCCAAGTTCTATCTCTTCC 57.216 41.667 0.00 0.00 0.00 3.46
6531 7597 7.123547 TCCTTTCTCTCCAAGTTCTATCTCTTC 59.876 40.741 0.00 0.00 0.00 2.87
6532 7598 6.957020 TCCTTTCTCTCCAAGTTCTATCTCTT 59.043 38.462 0.00 0.00 0.00 2.85
6533 7599 6.498538 TCCTTTCTCTCCAAGTTCTATCTCT 58.501 40.000 0.00 0.00 0.00 3.10
6534 7600 6.783708 TCCTTTCTCTCCAAGTTCTATCTC 57.216 41.667 0.00 0.00 0.00 2.75
6535 7601 7.560796 TTTCCTTTCTCTCCAAGTTCTATCT 57.439 36.000 0.00 0.00 0.00 1.98
6536 7602 7.661847 TGTTTTCCTTTCTCTCCAAGTTCTATC 59.338 37.037 0.00 0.00 0.00 2.08
6537 7603 7.518188 TGTTTTCCTTTCTCTCCAAGTTCTAT 58.482 34.615 0.00 0.00 0.00 1.98
6538 7604 6.895782 TGTTTTCCTTTCTCTCCAAGTTCTA 58.104 36.000 0.00 0.00 0.00 2.10
6539 7605 5.755849 TGTTTTCCTTTCTCTCCAAGTTCT 58.244 37.500 0.00 0.00 0.00 3.01
6540 7606 6.451064 TTGTTTTCCTTTCTCTCCAAGTTC 57.549 37.500 0.00 0.00 0.00 3.01
6541 7607 6.836007 AGATTGTTTTCCTTTCTCTCCAAGTT 59.164 34.615 0.00 0.00 0.00 2.66
6542 7608 6.368805 AGATTGTTTTCCTTTCTCTCCAAGT 58.631 36.000 0.00 0.00 0.00 3.16
6543 7609 6.890979 AGATTGTTTTCCTTTCTCTCCAAG 57.109 37.500 0.00 0.00 0.00 3.61
6544 7610 8.386264 AGATAGATTGTTTTCCTTTCTCTCCAA 58.614 33.333 0.00 0.00 0.00 3.53
6545 7611 7.922382 AGATAGATTGTTTTCCTTTCTCTCCA 58.078 34.615 0.00 0.00 0.00 3.86
6546 7612 8.264347 AGAGATAGATTGTTTTCCTTTCTCTCC 58.736 37.037 0.00 0.00 39.46 3.71
6576 7642 9.854668 GCATGAGGTAGTTAGGATAGATAGATA 57.145 37.037 0.00 0.00 0.00 1.98
6577 7643 7.500892 CGCATGAGGTAGTTAGGATAGATAGAT 59.499 40.741 0.00 0.00 0.00 1.98
6578 7644 6.824196 CGCATGAGGTAGTTAGGATAGATAGA 59.176 42.308 0.00 0.00 0.00 1.98
6579 7645 6.459024 GCGCATGAGGTAGTTAGGATAGATAG 60.459 46.154 0.30 0.00 0.00 2.08
6580 7646 5.357314 GCGCATGAGGTAGTTAGGATAGATA 59.643 44.000 0.30 0.00 0.00 1.98
6581 7647 4.158764 GCGCATGAGGTAGTTAGGATAGAT 59.841 45.833 0.30 0.00 0.00 1.98
6582 7648 3.506455 GCGCATGAGGTAGTTAGGATAGA 59.494 47.826 0.30 0.00 0.00 1.98
6583 7649 3.255888 TGCGCATGAGGTAGTTAGGATAG 59.744 47.826 5.66 0.00 0.00 2.08
6584 7650 3.005472 GTGCGCATGAGGTAGTTAGGATA 59.995 47.826 15.91 0.00 0.00 2.59
6585 7651 2.039418 TGCGCATGAGGTAGTTAGGAT 58.961 47.619 5.66 0.00 0.00 3.24
6586 7652 1.136305 GTGCGCATGAGGTAGTTAGGA 59.864 52.381 15.91 0.00 0.00 2.94
6587 7653 1.571919 GTGCGCATGAGGTAGTTAGG 58.428 55.000 15.91 0.00 0.00 2.69
6588 7654 1.200483 CGTGCGCATGAGGTAGTTAG 58.800 55.000 25.38 0.00 0.00 2.34
6589 7655 0.179121 CCGTGCGCATGAGGTAGTTA 60.179 55.000 30.68 0.00 0.00 2.24
6590 7656 1.447838 CCGTGCGCATGAGGTAGTT 60.448 57.895 30.68 0.00 0.00 2.24
6591 7657 2.184322 CCGTGCGCATGAGGTAGT 59.816 61.111 30.68 0.00 0.00 2.73
6592 7658 3.264897 GCCGTGCGCATGAGGTAG 61.265 66.667 30.68 14.36 37.47 3.18
6593 7659 3.770040 AGCCGTGCGCATGAGGTA 61.770 61.111 30.68 0.00 41.38 3.08
6604 7670 1.599071 CATACTATGGTTGCAGCCGTG 59.401 52.381 23.32 15.16 0.00 4.94
6605 7671 1.209504 ACATACTATGGTTGCAGCCGT 59.790 47.619 18.99 18.99 33.60 5.68
6606 7672 1.953559 ACATACTATGGTTGCAGCCG 58.046 50.000 15.43 3.19 33.60 5.52
6607 7673 3.278574 TGAACATACTATGGTTGCAGCC 58.721 45.455 13.50 13.50 33.60 4.85
6608 7674 4.155826 TGTTGAACATACTATGGTTGCAGC 59.844 41.667 0.00 0.00 33.60 5.25
6609 7675 5.391950 GGTGTTGAACATACTATGGTTGCAG 60.392 44.000 0.00 0.00 33.60 4.41
6610 7676 4.457603 GGTGTTGAACATACTATGGTTGCA 59.542 41.667 0.00 0.00 33.60 4.08
6611 7677 4.142469 GGGTGTTGAACATACTATGGTTGC 60.142 45.833 0.00 0.00 33.60 4.17
6612 7678 5.253330 AGGGTGTTGAACATACTATGGTTG 58.747 41.667 0.00 0.00 33.60 3.77
6613 7679 5.497474 GAGGGTGTTGAACATACTATGGTT 58.503 41.667 0.00 0.00 33.60 3.67
6614 7680 4.080526 GGAGGGTGTTGAACATACTATGGT 60.081 45.833 0.00 0.00 33.60 3.55
6615 7681 4.451900 GGAGGGTGTTGAACATACTATGG 58.548 47.826 0.00 0.00 33.60 2.74
6616 7682 4.451900 GGGAGGGTGTTGAACATACTATG 58.548 47.826 0.00 0.00 0.00 2.23
6617 7683 3.134081 CGGGAGGGTGTTGAACATACTAT 59.866 47.826 0.00 0.00 0.00 2.12
6618 7684 2.498481 CGGGAGGGTGTTGAACATACTA 59.502 50.000 0.00 0.00 0.00 1.82
6619 7685 1.278127 CGGGAGGGTGTTGAACATACT 59.722 52.381 0.00 2.69 0.00 2.12
6620 7686 1.002773 ACGGGAGGGTGTTGAACATAC 59.997 52.381 0.00 0.00 0.00 2.39
6621 7687 1.354101 ACGGGAGGGTGTTGAACATA 58.646 50.000 0.00 0.00 0.00 2.29
6622 7688 1.354101 TACGGGAGGGTGTTGAACAT 58.646 50.000 0.00 0.00 0.00 2.71
6623 7689 1.129917 TTACGGGAGGGTGTTGAACA 58.870 50.000 0.00 0.00 0.00 3.18
6624 7690 2.289819 TGATTACGGGAGGGTGTTGAAC 60.290 50.000 0.00 0.00 0.00 3.18
6625 7691 1.979308 TGATTACGGGAGGGTGTTGAA 59.021 47.619 0.00 0.00 0.00 2.69
6626 7692 1.276989 GTGATTACGGGAGGGTGTTGA 59.723 52.381 0.00 0.00 0.00 3.18
6627 7693 1.002659 TGTGATTACGGGAGGGTGTTG 59.997 52.381 0.00 0.00 0.00 3.33
6628 7694 1.354101 TGTGATTACGGGAGGGTGTT 58.646 50.000 0.00 0.00 0.00 3.32
6629 7695 1.002773 GTTGTGATTACGGGAGGGTGT 59.997 52.381 0.00 0.00 0.00 4.16
6630 7696 1.278127 AGTTGTGATTACGGGAGGGTG 59.722 52.381 0.00 0.00 0.00 4.61
6631 7697 1.652947 AGTTGTGATTACGGGAGGGT 58.347 50.000 0.00 0.00 0.00 4.34
6632 7698 2.027561 TGAAGTTGTGATTACGGGAGGG 60.028 50.000 0.00 0.00 0.00 4.30
6633 7699 3.328382 TGAAGTTGTGATTACGGGAGG 57.672 47.619 0.00 0.00 0.00 4.30
6634 7700 6.978343 TTAATGAAGTTGTGATTACGGGAG 57.022 37.500 0.00 0.00 0.00 4.30


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.