Multiple sequence alignment - TraesCS3B01G551800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G551800 chr3B 100.000 2462 0 0 1 2462 786602601 786605062 0.000000e+00 4547
1 TraesCS3B01G551800 chr3B 82.960 223 28 10 124 342 44789293 44789077 2.500000e-45 193
2 TraesCS3B01G551800 chr3B 81.333 225 31 10 124 346 44757998 44758213 3.260000e-39 172
3 TraesCS3B01G551800 chr4B 94.523 1698 89 4 764 2460 622281877 622280183 0.000000e+00 2617
4 TraesCS3B01G551800 chr4B 93.281 253 16 1 496 747 622282115 622281863 2.990000e-99 372
5 TraesCS3B01G551800 chr2B 93.110 1698 113 4 764 2460 523795678 523793984 0.000000e+00 2484
6 TraesCS3B01G551800 chr2B 92.369 249 19 0 499 747 523795912 523795664 3.010000e-94 355
7 TraesCS3B01G551800 chr2A 92.933 1698 116 3 764 2460 759479580 759481274 0.000000e+00 2468
8 TraesCS3B01G551800 chr2A 94.118 255 14 1 496 749 759479342 759479596 1.070000e-103 387
9 TraesCS3B01G551800 chr2A 96.000 100 1 3 244 342 202892217 202892314 2.530000e-35 159
10 TraesCS3B01G551800 chr6B 92.870 1697 120 1 764 2460 122804317 122802622 0.000000e+00 2462
11 TraesCS3B01G551800 chr6B 90.159 1697 166 1 764 2460 132654526 132652831 0.000000e+00 2207
12 TraesCS3B01G551800 chr6B 90.159 1697 165 2 764 2460 704435374 704433680 0.000000e+00 2207
13 TraesCS3B01G551800 chr6B 92.520 254 17 2 496 747 122804556 122804303 1.800000e-96 363
14 TraesCS3B01G551800 chr6B 89.412 255 26 1 496 749 704435612 704435358 1.100000e-83 320
15 TraesCS3B01G551800 chr1A 90.748 1697 155 2 765 2460 17873774 17872079 0.000000e+00 2263
16 TraesCS3B01G551800 chr1A 89.020 255 27 1 496 749 17874013 17873759 5.110000e-82 315
17 TraesCS3B01G551800 chr6A 90.106 1698 164 3 764 2460 100674660 100672966 0.000000e+00 2202
18 TraesCS3B01G551800 chr7B 89.982 1697 167 2 764 2460 580153110 580154803 0.000000e+00 2189
19 TraesCS3B01G551800 chr7B 94.882 254 10 3 496 747 28025823 28025571 6.380000e-106 394
20 TraesCS3B01G551800 chr3D 85.823 395 40 7 32 422 588200272 588200654 2.950000e-109 405
21 TraesCS3B01G551800 chr3D 83.173 208 26 8 125 330 26588557 26588357 5.410000e-42 182
22 TraesCS3B01G551800 chr3D 81.364 220 30 9 128 342 542224271 542224484 4.210000e-38 169
23 TraesCS3B01G551800 chr3A 86.082 388 34 11 34 415 718088503 718088876 1.370000e-107 399
24 TraesCS3B01G551800 chr3A 83.028 218 22 11 125 334 36667660 36667450 1.500000e-42 183
25 TraesCS3B01G551800 chr3A 81.448 221 28 11 128 342 678382989 678383202 4.210000e-38 169
26 TraesCS3B01G551800 chr7D 90.438 251 24 0 499 749 452993699 452993949 5.070000e-87 331
27 TraesCS3B01G551800 chr5B 89.020 255 27 1 496 749 660156569 660156315 5.110000e-82 315


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G551800 chr3B 786602601 786605062 2461 False 4547.0 4547 100.0000 1 2462 1 chr3B.!!$F2 2461
1 TraesCS3B01G551800 chr4B 622280183 622282115 1932 True 1494.5 2617 93.9020 496 2460 2 chr4B.!!$R1 1964
2 TraesCS3B01G551800 chr2B 523793984 523795912 1928 True 1419.5 2484 92.7395 499 2460 2 chr2B.!!$R1 1961
3 TraesCS3B01G551800 chr2A 759479342 759481274 1932 False 1427.5 2468 93.5255 496 2460 2 chr2A.!!$F2 1964
4 TraesCS3B01G551800 chr6B 132652831 132654526 1695 True 2207.0 2207 90.1590 764 2460 1 chr6B.!!$R1 1696
5 TraesCS3B01G551800 chr6B 122802622 122804556 1934 True 1412.5 2462 92.6950 496 2460 2 chr6B.!!$R2 1964
6 TraesCS3B01G551800 chr6B 704433680 704435612 1932 True 1263.5 2207 89.7855 496 2460 2 chr6B.!!$R3 1964
7 TraesCS3B01G551800 chr1A 17872079 17874013 1934 True 1289.0 2263 89.8840 496 2460 2 chr1A.!!$R1 1964
8 TraesCS3B01G551800 chr6A 100672966 100674660 1694 True 2202.0 2202 90.1060 764 2460 1 chr6A.!!$R1 1696
9 TraesCS3B01G551800 chr7B 580153110 580154803 1693 False 2189.0 2189 89.9820 764 2460 1 chr7B.!!$F1 1696

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
360 361 0.033504 TAATCATCGAAGAGGCCGGC 59.966 55.0 21.18 21.18 43.63 6.13 F
424 425 0.040425 GTGTCGTTGTGCCAATCCAC 60.040 55.0 0.00 0.00 36.28 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1450 1454 0.161024 GACACACGCTAAACAGTCGC 59.839 55.000 0.0 0.0 0.0 5.19 R
2375 2380 1.134965 AGAATCCTCGAAGTGAAGCGG 60.135 52.381 0.0 0.0 0.0 5.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.510906 AAGCTGAAGCCACCGTGT 59.489 55.556 0.00 0.00 43.38 4.49
18 19 1.893808 AAGCTGAAGCCACCGTGTG 60.894 57.895 0.00 0.00 43.38 3.82
30 31 3.418675 CCGTGTGGTACTGCTACTG 57.581 57.895 0.00 0.00 0.00 2.74
31 32 0.736325 CCGTGTGGTACTGCTACTGC 60.736 60.000 0.00 0.00 40.20 4.40
32 33 0.243907 CGTGTGGTACTGCTACTGCT 59.756 55.000 0.00 0.00 40.48 4.24
33 34 1.471287 CGTGTGGTACTGCTACTGCTA 59.529 52.381 0.00 0.00 40.48 3.49
34 35 2.478031 CGTGTGGTACTGCTACTGCTAG 60.478 54.545 0.00 0.00 40.48 3.42
35 36 2.492484 GTGTGGTACTGCTACTGCTAGT 59.508 50.000 0.00 0.00 40.48 2.57
36 37 3.693085 GTGTGGTACTGCTACTGCTAGTA 59.307 47.826 0.00 0.00 40.48 1.82
37 38 3.693085 TGTGGTACTGCTACTGCTAGTAC 59.307 47.826 15.47 15.47 44.00 2.73
38 39 2.941064 TGGTACTGCTACTGCTAGTACG 59.059 50.000 16.38 0.00 44.71 3.67
39 40 2.290093 GGTACTGCTACTGCTAGTACGG 59.710 54.545 16.38 4.03 44.71 4.02
40 41 2.125773 ACTGCTACTGCTAGTACGGT 57.874 50.000 0.00 0.00 40.48 4.83
41 42 1.743958 ACTGCTACTGCTAGTACGGTG 59.256 52.381 0.00 0.00 40.48 4.94
42 43 0.454600 TGCTACTGCTAGTACGGTGC 59.545 55.000 0.00 0.00 40.48 5.01
43 44 0.248949 GCTACTGCTAGTACGGTGCC 60.249 60.000 0.00 0.00 36.03 5.01
44 45 0.384669 CTACTGCTAGTACGGTGCCC 59.615 60.000 0.00 0.00 0.00 5.36
45 46 1.039233 TACTGCTAGTACGGTGCCCC 61.039 60.000 0.00 0.00 0.00 5.80
46 47 2.038329 TGCTAGTACGGTGCCCCT 59.962 61.111 0.00 0.00 0.00 4.79
47 48 2.298158 CTGCTAGTACGGTGCCCCTG 62.298 65.000 0.00 0.00 0.00 4.45
48 49 2.499685 CTAGTACGGTGCCCCTGC 59.500 66.667 0.00 0.00 38.26 4.85
49 50 2.038329 TAGTACGGTGCCCCTGCT 59.962 61.111 0.00 0.00 38.71 4.24
50 51 2.298158 CTAGTACGGTGCCCCTGCTG 62.298 65.000 0.00 0.00 38.71 4.41
58 59 4.033776 GCCCCTGCTGCCACACTA 62.034 66.667 0.00 0.00 33.53 2.74
59 60 2.270205 CCCCTGCTGCCACACTAG 59.730 66.667 0.00 0.00 0.00 2.57
60 61 2.437359 CCCTGCTGCCACACTAGC 60.437 66.667 0.00 0.00 40.29 3.42
61 62 2.667418 CCTGCTGCCACACTAGCT 59.333 61.111 0.00 0.00 40.52 3.32
62 63 1.002868 CCTGCTGCCACACTAGCTT 60.003 57.895 0.00 0.00 40.52 3.74
63 64 1.023513 CCTGCTGCCACACTAGCTTC 61.024 60.000 0.00 0.00 40.52 3.86
64 65 0.321034 CTGCTGCCACACTAGCTTCA 60.321 55.000 0.00 0.00 40.52 3.02
65 66 0.325933 TGCTGCCACACTAGCTTCAT 59.674 50.000 0.00 0.00 40.52 2.57
66 67 1.012841 GCTGCCACACTAGCTTCATC 58.987 55.000 0.00 0.00 36.99 2.92
67 68 1.661341 CTGCCACACTAGCTTCATCC 58.339 55.000 0.00 0.00 0.00 3.51
68 69 1.209019 CTGCCACACTAGCTTCATCCT 59.791 52.381 0.00 0.00 0.00 3.24
69 70 1.208052 TGCCACACTAGCTTCATCCTC 59.792 52.381 0.00 0.00 0.00 3.71
70 71 1.474143 GCCACACTAGCTTCATCCTCC 60.474 57.143 0.00 0.00 0.00 4.30
71 72 1.833630 CCACACTAGCTTCATCCTCCA 59.166 52.381 0.00 0.00 0.00 3.86
72 73 2.158986 CCACACTAGCTTCATCCTCCAG 60.159 54.545 0.00 0.00 0.00 3.86
73 74 2.762887 CACACTAGCTTCATCCTCCAGA 59.237 50.000 0.00 0.00 0.00 3.86
74 75 3.030291 ACACTAGCTTCATCCTCCAGAG 58.970 50.000 0.00 0.00 0.00 3.35
75 76 3.295093 CACTAGCTTCATCCTCCAGAGA 58.705 50.000 0.00 0.00 0.00 3.10
76 77 3.068024 CACTAGCTTCATCCTCCAGAGAC 59.932 52.174 0.00 0.00 0.00 3.36
77 78 1.494960 AGCTTCATCCTCCAGAGACC 58.505 55.000 0.00 0.00 0.00 3.85
78 79 0.103937 GCTTCATCCTCCAGAGACCG 59.896 60.000 0.00 0.00 0.00 4.79
79 80 0.749649 CTTCATCCTCCAGAGACCGG 59.250 60.000 0.00 0.00 0.00 5.28
80 81 0.335019 TTCATCCTCCAGAGACCGGA 59.665 55.000 9.46 0.00 0.00 5.14
94 95 3.393970 CGGAGGCAGAGGGAGCAA 61.394 66.667 0.00 0.00 0.00 3.91
95 96 2.959484 CGGAGGCAGAGGGAGCAAA 61.959 63.158 0.00 0.00 0.00 3.68
96 97 1.377856 GGAGGCAGAGGGAGCAAAC 60.378 63.158 0.00 0.00 0.00 2.93
97 98 1.376466 GAGGCAGAGGGAGCAAACA 59.624 57.895 0.00 0.00 0.00 2.83
98 99 0.250901 GAGGCAGAGGGAGCAAACAA 60.251 55.000 0.00 0.00 0.00 2.83
99 100 0.185901 AGGCAGAGGGAGCAAACAAA 59.814 50.000 0.00 0.00 0.00 2.83
100 101 1.203100 AGGCAGAGGGAGCAAACAAAT 60.203 47.619 0.00 0.00 0.00 2.32
101 102 2.041620 AGGCAGAGGGAGCAAACAAATA 59.958 45.455 0.00 0.00 0.00 1.40
102 103 2.424956 GGCAGAGGGAGCAAACAAATAG 59.575 50.000 0.00 0.00 0.00 1.73
103 104 3.084786 GCAGAGGGAGCAAACAAATAGT 58.915 45.455 0.00 0.00 0.00 2.12
104 105 4.261801 GCAGAGGGAGCAAACAAATAGTA 58.738 43.478 0.00 0.00 0.00 1.82
105 106 4.333926 GCAGAGGGAGCAAACAAATAGTAG 59.666 45.833 0.00 0.00 0.00 2.57
106 107 5.491982 CAGAGGGAGCAAACAAATAGTAGT 58.508 41.667 0.00 0.00 0.00 2.73
107 108 6.640518 CAGAGGGAGCAAACAAATAGTAGTA 58.359 40.000 0.00 0.00 0.00 1.82
108 109 6.758886 CAGAGGGAGCAAACAAATAGTAGTAG 59.241 42.308 0.00 0.00 0.00 2.57
109 110 6.440965 AGAGGGAGCAAACAAATAGTAGTAGT 59.559 38.462 0.00 0.00 0.00 2.73
110 111 7.618512 AGAGGGAGCAAACAAATAGTAGTAGTA 59.381 37.037 0.00 0.00 0.00 1.82
111 112 7.783042 AGGGAGCAAACAAATAGTAGTAGTAG 58.217 38.462 0.00 0.00 0.00 2.57
112 113 6.479331 GGGAGCAAACAAATAGTAGTAGTAGC 59.521 42.308 0.00 0.00 0.00 3.58
113 114 7.039882 GGAGCAAACAAATAGTAGTAGTAGCA 58.960 38.462 0.00 0.00 0.00 3.49
114 115 7.010275 GGAGCAAACAAATAGTAGTAGTAGCAC 59.990 40.741 0.00 0.00 0.00 4.40
115 116 7.612677 AGCAAACAAATAGTAGTAGTAGCACT 58.387 34.615 0.00 0.00 0.00 4.40
116 117 8.095169 AGCAAACAAATAGTAGTAGTAGCACTT 58.905 33.333 0.00 0.00 0.00 3.16
117 118 8.718734 GCAAACAAATAGTAGTAGTAGCACTTT 58.281 33.333 0.00 0.00 0.00 2.66
119 120 9.991906 AAACAAATAGTAGTAGTAGCACTTTGA 57.008 29.630 12.59 0.00 0.00 2.69
120 121 9.991906 AACAAATAGTAGTAGTAGCACTTTGAA 57.008 29.630 12.59 0.00 0.00 2.69
123 124 9.517609 AAATAGTAGTAGTAGCACTTTGAATCG 57.482 33.333 0.00 0.00 0.00 3.34
124 125 5.341617 AGTAGTAGTAGCACTTTGAATCGC 58.658 41.667 0.00 0.00 0.00 4.58
125 126 4.188247 AGTAGTAGCACTTTGAATCGCA 57.812 40.909 0.00 0.00 0.00 5.10
126 127 4.759782 AGTAGTAGCACTTTGAATCGCAT 58.240 39.130 0.00 0.00 0.00 4.73
127 128 5.178797 AGTAGTAGCACTTTGAATCGCATT 58.821 37.500 0.00 0.00 0.00 3.56
128 129 4.606457 AGTAGCACTTTGAATCGCATTC 57.394 40.909 0.00 2.93 39.70 2.67
129 130 4.256920 AGTAGCACTTTGAATCGCATTCT 58.743 39.130 9.34 0.00 39.96 2.40
130 131 3.754188 AGCACTTTGAATCGCATTCTC 57.246 42.857 9.34 0.00 39.96 2.87
131 132 2.094894 AGCACTTTGAATCGCATTCTCG 59.905 45.455 9.34 0.00 39.96 4.04
132 133 2.434761 CACTTTGAATCGCATTCTCGC 58.565 47.619 9.34 0.00 39.96 5.03
133 134 2.094894 CACTTTGAATCGCATTCTCGCT 59.905 45.455 9.34 0.00 39.96 4.93
134 135 2.094894 ACTTTGAATCGCATTCTCGCTG 59.905 45.455 9.34 0.00 39.96 5.18
135 136 0.374758 TTGAATCGCATTCTCGCTGC 59.625 50.000 9.34 0.00 39.96 5.25
136 137 0.740516 TGAATCGCATTCTCGCTGCA 60.741 50.000 0.00 0.00 39.64 4.41
137 138 0.374758 GAATCGCATTCTCGCTGCAA 59.625 50.000 0.00 0.00 39.64 4.08
138 139 0.804364 AATCGCATTCTCGCTGCAAA 59.196 45.000 0.00 0.00 39.64 3.68
139 140 0.097674 ATCGCATTCTCGCTGCAAAC 59.902 50.000 0.00 0.00 39.64 2.93
140 141 1.207339 CGCATTCTCGCTGCAAACA 59.793 52.632 0.00 0.00 39.64 2.83
141 142 0.179181 CGCATTCTCGCTGCAAACAT 60.179 50.000 0.00 0.00 39.64 2.71
142 143 1.730121 CGCATTCTCGCTGCAAACATT 60.730 47.619 0.00 0.00 39.64 2.71
143 144 2.331194 GCATTCTCGCTGCAAACATTT 58.669 42.857 0.00 0.00 39.46 2.32
144 145 3.500982 GCATTCTCGCTGCAAACATTTA 58.499 40.909 0.00 0.00 39.46 1.40
145 146 3.301642 GCATTCTCGCTGCAAACATTTAC 59.698 43.478 0.00 0.00 39.46 2.01
146 147 3.552604 TTCTCGCTGCAAACATTTACC 57.447 42.857 0.00 0.00 0.00 2.85
147 148 1.463056 TCTCGCTGCAAACATTTACCG 59.537 47.619 0.00 0.00 0.00 4.02
148 149 1.463056 CTCGCTGCAAACATTTACCGA 59.537 47.619 0.00 0.00 0.00 4.69
149 150 1.874231 TCGCTGCAAACATTTACCGAA 59.126 42.857 0.00 0.00 0.00 4.30
150 151 1.976045 CGCTGCAAACATTTACCGAAC 59.024 47.619 0.00 0.00 0.00 3.95
151 152 2.324860 GCTGCAAACATTTACCGAACC 58.675 47.619 0.00 0.00 0.00 3.62
152 153 2.287909 GCTGCAAACATTTACCGAACCA 60.288 45.455 0.00 0.00 0.00 3.67
153 154 3.797184 GCTGCAAACATTTACCGAACCAA 60.797 43.478 0.00 0.00 0.00 3.67
154 155 4.363999 CTGCAAACATTTACCGAACCAAA 58.636 39.130 0.00 0.00 0.00 3.28
155 156 4.950050 TGCAAACATTTACCGAACCAAAT 58.050 34.783 0.00 0.00 0.00 2.32
156 157 6.085555 TGCAAACATTTACCGAACCAAATA 57.914 33.333 0.00 0.00 0.00 1.40
157 158 6.692486 TGCAAACATTTACCGAACCAAATAT 58.308 32.000 0.00 0.00 0.00 1.28
158 159 7.155328 TGCAAACATTTACCGAACCAAATATT 58.845 30.769 0.00 0.00 0.00 1.28
159 160 7.657761 TGCAAACATTTACCGAACCAAATATTT 59.342 29.630 0.00 0.00 0.00 1.40
160 161 8.166066 GCAAACATTTACCGAACCAAATATTTC 58.834 33.333 0.00 0.00 0.00 2.17
161 162 9.197694 CAAACATTTACCGAACCAAATATTTCA 57.802 29.630 0.00 0.00 0.00 2.69
162 163 9.765795 AAACATTTACCGAACCAAATATTTCAA 57.234 25.926 0.00 0.00 0.00 2.69
163 164 8.980143 ACATTTACCGAACCAAATATTTCAAG 57.020 30.769 0.00 0.00 0.00 3.02
164 165 8.032451 ACATTTACCGAACCAAATATTTCAAGG 58.968 33.333 0.00 0.00 0.00 3.61
165 166 7.527568 TTTACCGAACCAAATATTTCAAGGT 57.472 32.000 0.00 0.19 0.00 3.50
166 167 5.385509 ACCGAACCAAATATTTCAAGGTG 57.614 39.130 8.92 1.57 31.86 4.00
167 168 4.830600 ACCGAACCAAATATTTCAAGGTGT 59.169 37.500 8.92 2.08 31.86 4.16
168 169 6.005198 ACCGAACCAAATATTTCAAGGTGTA 58.995 36.000 8.92 0.00 31.86 2.90
169 170 6.490721 ACCGAACCAAATATTTCAAGGTGTAA 59.509 34.615 8.92 0.00 31.86 2.41
170 171 7.177744 ACCGAACCAAATATTTCAAGGTGTAAT 59.822 33.333 8.92 0.00 31.86 1.89
171 172 7.487829 CCGAACCAAATATTTCAAGGTGTAATG 59.512 37.037 8.92 0.53 31.86 1.90
172 173 7.487829 CGAACCAAATATTTCAAGGTGTAATGG 59.512 37.037 8.92 2.06 31.86 3.16
173 174 8.429237 AACCAAATATTTCAAGGTGTAATGGA 57.571 30.769 8.92 0.00 31.86 3.41
174 175 7.836842 ACCAAATATTTCAAGGTGTAATGGAC 58.163 34.615 7.67 0.00 0.00 4.02
175 176 7.093509 ACCAAATATTTCAAGGTGTAATGGACC 60.094 37.037 7.67 0.00 0.00 4.46
176 177 6.693315 AATATTTCAAGGTGTAATGGACCG 57.307 37.500 0.00 0.00 38.64 4.79
177 178 2.483014 TTCAAGGTGTAATGGACCGG 57.517 50.000 0.00 0.00 38.64 5.28
178 179 1.354101 TCAAGGTGTAATGGACCGGT 58.646 50.000 6.92 6.92 38.64 5.28
179 180 1.700739 TCAAGGTGTAATGGACCGGTT 59.299 47.619 9.42 0.00 38.64 4.44
180 181 1.810151 CAAGGTGTAATGGACCGGTTG 59.190 52.381 9.42 0.00 38.64 3.77
181 182 1.061546 AGGTGTAATGGACCGGTTGT 58.938 50.000 9.42 0.00 38.64 3.32
182 183 1.161843 GGTGTAATGGACCGGTTGTG 58.838 55.000 9.42 0.00 0.00 3.33
183 184 1.270947 GGTGTAATGGACCGGTTGTGA 60.271 52.381 9.42 0.00 0.00 3.58
184 185 1.802365 GTGTAATGGACCGGTTGTGAC 59.198 52.381 9.42 4.53 0.00 3.67
185 186 1.073177 GTAATGGACCGGTTGTGACG 58.927 55.000 9.42 0.00 0.00 4.35
186 187 0.680618 TAATGGACCGGTTGTGACGT 59.319 50.000 9.42 0.00 0.00 4.34
187 188 0.179040 AATGGACCGGTTGTGACGTT 60.179 50.000 9.42 2.19 0.00 3.99
188 189 0.601841 ATGGACCGGTTGTGACGTTC 60.602 55.000 9.42 0.00 0.00 3.95
189 190 2.305127 GGACCGGTTGTGACGTTCG 61.305 63.158 9.42 0.00 0.00 3.95
190 191 1.589727 GACCGGTTGTGACGTTCGT 60.590 57.895 9.42 0.00 0.00 3.85
191 192 1.814211 GACCGGTTGTGACGTTCGTG 61.814 60.000 9.42 0.00 0.00 4.35
192 193 2.591311 CCGGTTGTGACGTTCGTGG 61.591 63.158 1.74 0.00 0.00 4.94
193 194 2.591311 CGGTTGTGACGTTCGTGGG 61.591 63.158 1.74 0.00 0.00 4.61
194 195 1.522130 GGTTGTGACGTTCGTGGGT 60.522 57.895 1.74 0.00 0.00 4.51
195 196 1.091197 GGTTGTGACGTTCGTGGGTT 61.091 55.000 1.74 0.00 0.00 4.11
196 197 0.728542 GTTGTGACGTTCGTGGGTTT 59.271 50.000 1.74 0.00 0.00 3.27
197 198 0.727970 TTGTGACGTTCGTGGGTTTG 59.272 50.000 1.74 0.00 0.00 2.93
198 199 1.090625 TGTGACGTTCGTGGGTTTGG 61.091 55.000 1.74 0.00 0.00 3.28
199 200 1.524165 TGACGTTCGTGGGTTTGGG 60.524 57.895 1.74 0.00 0.00 4.12
200 201 1.227615 GACGTTCGTGGGTTTGGGA 60.228 57.895 1.74 0.00 0.00 4.37
201 202 0.814812 GACGTTCGTGGGTTTGGGAA 60.815 55.000 1.74 0.00 0.00 3.97
202 203 1.096967 ACGTTCGTGGGTTTGGGAAC 61.097 55.000 0.00 0.00 36.35 3.62
203 204 0.816421 CGTTCGTGGGTTTGGGAACT 60.816 55.000 0.00 0.00 37.28 3.01
204 205 0.949397 GTTCGTGGGTTTGGGAACTC 59.051 55.000 0.00 0.00 36.67 3.01
205 206 0.533308 TTCGTGGGTTTGGGAACTCG 60.533 55.000 0.00 0.00 39.19 4.18
206 207 1.227734 CGTGGGTTTGGGAACTCGT 60.228 57.895 0.00 0.00 39.19 4.18
207 208 0.816421 CGTGGGTTTGGGAACTCGTT 60.816 55.000 0.00 0.00 39.19 3.85
208 209 0.949397 GTGGGTTTGGGAACTCGTTC 59.051 55.000 1.22 1.22 39.19 3.95
209 210 0.533308 TGGGTTTGGGAACTCGTTCG 60.533 55.000 3.93 0.00 39.19 3.95
210 211 0.249996 GGGTTTGGGAACTCGTTCGA 60.250 55.000 3.93 0.00 40.37 3.71
211 212 1.609841 GGGTTTGGGAACTCGTTCGAT 60.610 52.381 3.93 0.00 40.37 3.59
212 213 2.354003 GGGTTTGGGAACTCGTTCGATA 60.354 50.000 3.93 0.00 40.37 2.92
213 214 3.328505 GGTTTGGGAACTCGTTCGATAA 58.671 45.455 3.93 0.00 40.37 1.75
214 215 3.937079 GGTTTGGGAACTCGTTCGATAAT 59.063 43.478 3.93 0.00 40.37 1.28
215 216 5.111293 GGTTTGGGAACTCGTTCGATAATA 58.889 41.667 3.93 0.00 40.37 0.98
216 217 5.006068 GGTTTGGGAACTCGTTCGATAATAC 59.994 44.000 3.93 0.00 40.37 1.89
217 218 5.587388 TTGGGAACTCGTTCGATAATACT 57.413 39.130 3.93 0.00 40.37 2.12
218 219 6.698008 TTGGGAACTCGTTCGATAATACTA 57.302 37.500 3.93 0.00 40.37 1.82
219 220 6.889301 TGGGAACTCGTTCGATAATACTAT 57.111 37.500 3.93 0.00 40.37 2.12
220 221 7.984422 TGGGAACTCGTTCGATAATACTATA 57.016 36.000 3.93 0.00 40.37 1.31
221 222 8.394971 TGGGAACTCGTTCGATAATACTATAA 57.605 34.615 3.93 0.00 40.37 0.98
222 223 8.849168 TGGGAACTCGTTCGATAATACTATAAA 58.151 33.333 3.93 0.00 40.37 1.40
223 224 9.122613 GGGAACTCGTTCGATAATACTATAAAC 57.877 37.037 3.93 0.00 40.37 2.01
224 225 9.122613 GGAACTCGTTCGATAATACTATAAACC 57.877 37.037 3.93 0.00 40.37 3.27
225 226 9.669353 GAACTCGTTCGATAATACTATAAACCA 57.331 33.333 0.00 0.00 0.00 3.67
240 241 8.348983 ACTATAAACCATAATTTCGTCTGTCG 57.651 34.615 0.00 0.00 41.41 4.35
241 242 4.939509 AAACCATAATTTCGTCTGTCGG 57.060 40.909 0.00 0.00 40.32 4.79
242 243 3.880047 ACCATAATTTCGTCTGTCGGA 57.120 42.857 0.00 0.00 40.32 4.55
243 244 4.196626 ACCATAATTTCGTCTGTCGGAA 57.803 40.909 0.00 0.00 41.54 4.30
244 245 3.930848 ACCATAATTTCGTCTGTCGGAAC 59.069 43.478 0.00 0.00 40.03 3.62
245 246 3.930229 CCATAATTTCGTCTGTCGGAACA 59.070 43.478 0.00 0.00 40.03 3.18
246 247 4.570772 CCATAATTTCGTCTGTCGGAACAT 59.429 41.667 0.00 0.00 40.03 2.71
247 248 5.064707 CCATAATTTCGTCTGTCGGAACATT 59.935 40.000 0.00 0.00 40.03 2.71
248 249 4.663636 AATTTCGTCTGTCGGAACATTC 57.336 40.909 0.00 0.00 40.03 2.67
249 250 1.693467 TTCGTCTGTCGGAACATTCG 58.307 50.000 0.00 0.00 40.32 3.34
250 251 0.594602 TCGTCTGTCGGAACATTCGT 59.405 50.000 0.00 0.00 40.32 3.85
251 252 0.982673 CGTCTGTCGGAACATTCGTC 59.017 55.000 0.00 0.00 34.13 4.20
252 253 1.664874 CGTCTGTCGGAACATTCGTCA 60.665 52.381 0.00 0.00 34.13 4.35
253 254 2.400399 GTCTGTCGGAACATTCGTCAA 58.600 47.619 0.00 0.00 34.13 3.18
254 255 2.408704 GTCTGTCGGAACATTCGTCAAG 59.591 50.000 0.00 0.00 34.13 3.02
255 256 2.295070 TCTGTCGGAACATTCGTCAAGA 59.705 45.455 0.00 0.00 34.13 3.02
256 257 3.056821 TCTGTCGGAACATTCGTCAAGAT 60.057 43.478 0.00 0.00 34.13 2.40
257 258 2.993220 TGTCGGAACATTCGTCAAGATG 59.007 45.455 0.00 0.00 0.00 2.90
258 259 2.348666 GTCGGAACATTCGTCAAGATGG 59.651 50.000 0.00 0.00 0.00 3.51
259 260 1.062587 CGGAACATTCGTCAAGATGGC 59.937 52.381 0.00 0.00 0.00 4.40
260 261 1.401905 GGAACATTCGTCAAGATGGCC 59.598 52.381 0.00 0.00 0.00 5.36
261 262 1.062587 GAACATTCGTCAAGATGGCCG 59.937 52.381 0.00 0.00 0.00 6.13
262 263 0.249120 ACATTCGTCAAGATGGCCGA 59.751 50.000 0.00 0.00 0.00 5.54
263 264 0.933097 CATTCGTCAAGATGGCCGAG 59.067 55.000 0.00 0.00 0.00 4.63
264 265 0.537188 ATTCGTCAAGATGGCCGAGT 59.463 50.000 0.00 0.00 0.00 4.18
265 266 0.320374 TTCGTCAAGATGGCCGAGTT 59.680 50.000 0.00 0.00 0.00 3.01
266 267 0.389817 TCGTCAAGATGGCCGAGTTG 60.390 55.000 0.00 0.84 0.00 3.16
267 268 1.361668 CGTCAAGATGGCCGAGTTGG 61.362 60.000 0.00 0.00 42.50 3.77
268 269 0.321653 GTCAAGATGGCCGAGTTGGT 60.322 55.000 0.00 0.00 41.21 3.67
269 270 0.036388 TCAAGATGGCCGAGTTGGTC 60.036 55.000 0.00 0.00 45.24 4.02
270 271 0.036010 CAAGATGGCCGAGTTGGTCT 60.036 55.000 1.86 0.00 45.26 3.85
271 272 1.207089 CAAGATGGCCGAGTTGGTCTA 59.793 52.381 1.86 0.00 45.26 2.59
272 273 1.568504 AGATGGCCGAGTTGGTCTAA 58.431 50.000 1.86 0.00 45.26 2.10
273 274 1.482593 AGATGGCCGAGTTGGTCTAAG 59.517 52.381 1.86 0.00 45.26 2.18
274 275 0.541863 ATGGCCGAGTTGGTCTAAGG 59.458 55.000 1.86 0.00 45.26 2.69
275 276 1.449778 GGCCGAGTTGGTCTAAGGC 60.450 63.158 0.00 0.00 44.13 4.35
276 277 1.810030 GCCGAGTTGGTCTAAGGCG 60.810 63.158 0.00 0.00 39.16 5.52
277 278 1.810030 CCGAGTTGGTCTAAGGCGC 60.810 63.158 0.00 0.00 0.00 6.53
278 279 1.810030 CGAGTTGGTCTAAGGCGCC 60.810 63.158 21.89 21.89 0.00 6.53
279 280 1.295423 GAGTTGGTCTAAGGCGCCA 59.705 57.895 31.54 7.98 0.00 5.69
280 281 0.741221 GAGTTGGTCTAAGGCGCCAG 60.741 60.000 31.54 19.00 33.41 4.85
281 282 1.003718 GTTGGTCTAAGGCGCCAGT 60.004 57.895 31.54 18.99 33.41 4.00
282 283 0.605589 GTTGGTCTAAGGCGCCAGTT 60.606 55.000 31.54 18.15 33.41 3.16
283 284 0.109723 TTGGTCTAAGGCGCCAGTTT 59.890 50.000 31.54 17.33 33.41 2.66
284 285 0.321298 TGGTCTAAGGCGCCAGTTTC 60.321 55.000 31.54 15.41 0.00 2.78
285 286 0.321298 GGTCTAAGGCGCCAGTTTCA 60.321 55.000 31.54 3.65 0.00 2.69
286 287 1.079503 GTCTAAGGCGCCAGTTTCAG 58.920 55.000 31.54 15.17 0.00 3.02
287 288 0.036388 TCTAAGGCGCCAGTTTCAGG 60.036 55.000 31.54 9.36 0.00 3.86
288 289 0.321653 CTAAGGCGCCAGTTTCAGGT 60.322 55.000 31.54 0.00 0.00 4.00
289 290 0.978151 TAAGGCGCCAGTTTCAGGTA 59.022 50.000 31.54 3.05 0.00 3.08
290 291 0.605589 AAGGCGCCAGTTTCAGGTAC 60.606 55.000 31.54 0.00 0.00 3.34
291 292 1.003718 GGCGCCAGTTTCAGGTACT 60.004 57.895 24.80 0.00 43.88 2.73
313 314 2.281208 CGAAAGGGCGTGGGTTCA 60.281 61.111 0.00 0.00 0.00 3.18
314 315 1.894756 CGAAAGGGCGTGGGTTCAA 60.895 57.895 0.00 0.00 0.00 2.69
315 316 1.448922 CGAAAGGGCGTGGGTTCAAA 61.449 55.000 0.00 0.00 0.00 2.69
316 317 0.966179 GAAAGGGCGTGGGTTCAAAT 59.034 50.000 0.00 0.00 0.00 2.32
317 318 0.966179 AAAGGGCGTGGGTTCAAATC 59.034 50.000 0.00 0.00 0.00 2.17
318 319 0.898326 AAGGGCGTGGGTTCAAATCC 60.898 55.000 0.00 0.00 0.00 3.01
319 320 2.348104 GGGCGTGGGTTCAAATCCC 61.348 63.158 0.00 0.00 44.81 3.85
327 328 3.154827 GGGTTCAAATCCCACTCTTGA 57.845 47.619 0.00 0.00 44.05 3.02
328 329 2.820197 GGGTTCAAATCCCACTCTTGAC 59.180 50.000 0.00 0.00 44.05 3.18
329 330 3.486383 GGTTCAAATCCCACTCTTGACA 58.514 45.455 0.00 0.00 0.00 3.58
330 331 3.888930 GGTTCAAATCCCACTCTTGACAA 59.111 43.478 0.00 0.00 0.00 3.18
331 332 4.524328 GGTTCAAATCCCACTCTTGACAAT 59.476 41.667 0.00 0.00 0.00 2.71
332 333 5.011023 GGTTCAAATCCCACTCTTGACAATT 59.989 40.000 0.00 0.00 0.00 2.32
333 334 6.462909 GGTTCAAATCCCACTCTTGACAATTT 60.463 38.462 0.00 0.00 0.00 1.82
334 335 6.331369 TCAAATCCCACTCTTGACAATTTC 57.669 37.500 0.00 0.00 0.00 2.17
335 336 6.070656 TCAAATCCCACTCTTGACAATTTCT 58.929 36.000 0.00 0.00 0.00 2.52
336 337 6.207417 TCAAATCCCACTCTTGACAATTTCTC 59.793 38.462 0.00 0.00 0.00 2.87
337 338 4.982241 TCCCACTCTTGACAATTTCTCT 57.018 40.909 0.00 0.00 0.00 3.10
338 339 5.310409 TCCCACTCTTGACAATTTCTCTT 57.690 39.130 0.00 0.00 0.00 2.85
339 340 5.694995 TCCCACTCTTGACAATTTCTCTTT 58.305 37.500 0.00 0.00 0.00 2.52
340 341 6.129179 TCCCACTCTTGACAATTTCTCTTTT 58.871 36.000 0.00 0.00 0.00 2.27
341 342 6.607198 TCCCACTCTTGACAATTTCTCTTTTT 59.393 34.615 0.00 0.00 0.00 1.94
342 343 7.777910 TCCCACTCTTGACAATTTCTCTTTTTA 59.222 33.333 0.00 0.00 0.00 1.52
343 344 8.413229 CCCACTCTTGACAATTTCTCTTTTTAA 58.587 33.333 0.00 0.00 0.00 1.52
344 345 9.971922 CCACTCTTGACAATTTCTCTTTTTAAT 57.028 29.630 0.00 0.00 0.00 1.40
356 357 6.910536 TCTCTTTTTAATCATCGAAGAGGC 57.089 37.500 10.47 0.00 43.63 4.70
357 358 5.817816 TCTCTTTTTAATCATCGAAGAGGCC 59.182 40.000 0.00 0.00 43.63 5.19
358 359 4.570772 TCTTTTTAATCATCGAAGAGGCCG 59.429 41.667 0.00 0.00 43.63 6.13
359 360 2.526304 TTAATCATCGAAGAGGCCGG 57.474 50.000 0.00 0.00 43.63 6.13
360 361 0.033504 TAATCATCGAAGAGGCCGGC 59.966 55.000 21.18 21.18 43.63 6.13
361 362 1.971505 AATCATCGAAGAGGCCGGCA 61.972 55.000 30.85 5.63 43.63 5.69
362 363 2.650813 ATCATCGAAGAGGCCGGCAC 62.651 60.000 30.85 21.36 43.63 5.01
363 364 3.390521 ATCGAAGAGGCCGGCACA 61.391 61.111 30.85 5.93 43.63 4.57
364 365 2.735772 ATCGAAGAGGCCGGCACAT 61.736 57.895 30.85 13.99 43.63 3.21
365 366 2.257409 ATCGAAGAGGCCGGCACATT 62.257 55.000 30.85 18.85 43.63 2.71
366 367 2.040544 CGAAGAGGCCGGCACATTT 61.041 57.895 30.85 16.40 0.00 2.32
367 368 1.803289 GAAGAGGCCGGCACATTTC 59.197 57.895 30.85 20.66 0.00 2.17
368 369 1.982073 GAAGAGGCCGGCACATTTCG 61.982 60.000 30.85 0.00 0.00 3.46
376 377 2.109609 CGGCACATTTCGGAATCATG 57.890 50.000 0.00 0.00 0.00 3.07
377 378 1.670295 CGGCACATTTCGGAATCATGA 59.330 47.619 0.00 0.00 0.00 3.07
378 379 2.539547 CGGCACATTTCGGAATCATGAC 60.540 50.000 0.00 0.00 0.00 3.06
379 380 2.684881 GGCACATTTCGGAATCATGACT 59.315 45.455 0.00 0.00 0.00 3.41
380 381 3.876914 GGCACATTTCGGAATCATGACTA 59.123 43.478 0.00 0.00 0.00 2.59
381 382 4.516698 GGCACATTTCGGAATCATGACTAT 59.483 41.667 0.00 0.00 0.00 2.12
382 383 5.446709 GCACATTTCGGAATCATGACTATG 58.553 41.667 0.00 2.26 35.57 2.23
383 384 5.446709 CACATTTCGGAATCATGACTATGC 58.553 41.667 0.00 0.00 34.21 3.14
384 385 5.007921 CACATTTCGGAATCATGACTATGCA 59.992 40.000 0.00 0.00 34.21 3.96
385 386 5.589855 ACATTTCGGAATCATGACTATGCAA 59.410 36.000 0.00 0.00 34.21 4.08
386 387 5.484173 TTTCGGAATCATGACTATGCAAC 57.516 39.130 0.00 0.00 34.21 4.17
387 388 3.123050 TCGGAATCATGACTATGCAACG 58.877 45.455 0.00 0.00 34.21 4.10
388 389 2.348872 CGGAATCATGACTATGCAACGC 60.349 50.000 0.00 0.00 34.21 4.84
389 390 2.031682 GGAATCATGACTATGCAACGCC 60.032 50.000 0.00 0.00 34.21 5.68
390 391 1.220529 ATCATGACTATGCAACGCCG 58.779 50.000 0.00 0.00 34.21 6.46
391 392 0.108377 TCATGACTATGCAACGCCGT 60.108 50.000 0.00 0.00 34.21 5.68
392 393 0.726827 CATGACTATGCAACGCCGTT 59.273 50.000 0.00 0.00 0.00 4.44
393 394 1.130373 CATGACTATGCAACGCCGTTT 59.870 47.619 0.00 0.00 0.00 3.60
394 395 1.231221 TGACTATGCAACGCCGTTTT 58.769 45.000 0.00 0.00 0.00 2.43
395 396 2.414806 TGACTATGCAACGCCGTTTTA 58.585 42.857 0.00 0.00 0.00 1.52
396 397 2.158058 TGACTATGCAACGCCGTTTTAC 59.842 45.455 0.00 0.00 0.00 2.01
397 398 2.414138 GACTATGCAACGCCGTTTTACT 59.586 45.455 0.00 0.00 0.00 2.24
398 399 2.414138 ACTATGCAACGCCGTTTTACTC 59.586 45.455 0.00 0.00 0.00 2.59
399 400 1.519408 ATGCAACGCCGTTTTACTCT 58.481 45.000 0.00 0.00 0.00 3.24
400 401 0.584396 TGCAACGCCGTTTTACTCTG 59.416 50.000 0.00 0.00 0.00 3.35
401 402 0.724785 GCAACGCCGTTTTACTCTGC 60.725 55.000 0.00 0.00 0.00 4.26
402 403 0.865769 CAACGCCGTTTTACTCTGCT 59.134 50.000 0.00 0.00 0.00 4.24
403 404 1.136336 CAACGCCGTTTTACTCTGCTC 60.136 52.381 0.00 0.00 0.00 4.26
404 405 0.669625 ACGCCGTTTTACTCTGCTCC 60.670 55.000 0.00 0.00 0.00 4.70
405 406 1.683790 CGCCGTTTTACTCTGCTCCG 61.684 60.000 0.00 0.00 0.00 4.63
406 407 0.669625 GCCGTTTTACTCTGCTCCGT 60.670 55.000 0.00 0.00 0.00 4.69
407 408 1.068474 CCGTTTTACTCTGCTCCGTG 58.932 55.000 0.00 0.00 0.00 4.94
408 409 1.604693 CCGTTTTACTCTGCTCCGTGT 60.605 52.381 0.00 0.00 0.00 4.49
409 410 1.719780 CGTTTTACTCTGCTCCGTGTC 59.280 52.381 0.00 0.00 0.00 3.67
410 411 1.719780 GTTTTACTCTGCTCCGTGTCG 59.280 52.381 0.00 0.00 0.00 4.35
411 412 0.956633 TTTACTCTGCTCCGTGTCGT 59.043 50.000 0.00 0.00 0.00 4.34
412 413 0.956633 TTACTCTGCTCCGTGTCGTT 59.043 50.000 0.00 0.00 0.00 3.85
413 414 0.240145 TACTCTGCTCCGTGTCGTTG 59.760 55.000 0.00 0.00 0.00 4.10
414 415 1.007271 CTCTGCTCCGTGTCGTTGT 60.007 57.895 0.00 0.00 0.00 3.32
415 416 1.278172 CTCTGCTCCGTGTCGTTGTG 61.278 60.000 0.00 0.00 0.00 3.33
416 417 2.943345 CTGCTCCGTGTCGTTGTGC 61.943 63.158 0.00 0.00 0.00 4.57
417 418 3.712881 GCTCCGTGTCGTTGTGCC 61.713 66.667 0.00 0.00 0.00 5.01
418 419 2.279851 CTCCGTGTCGTTGTGCCA 60.280 61.111 0.00 0.00 0.00 4.92
419 420 1.885388 CTCCGTGTCGTTGTGCCAA 60.885 57.895 0.00 0.00 0.00 4.52
420 421 1.227704 TCCGTGTCGTTGTGCCAAT 60.228 52.632 0.00 0.00 0.00 3.16
421 422 1.206578 CCGTGTCGTTGTGCCAATC 59.793 57.895 0.00 0.00 0.00 2.67
422 423 1.206578 CGTGTCGTTGTGCCAATCC 59.793 57.895 0.00 0.00 0.00 3.01
423 424 1.502990 CGTGTCGTTGTGCCAATCCA 61.503 55.000 0.00 0.00 0.00 3.41
424 425 0.040425 GTGTCGTTGTGCCAATCCAC 60.040 55.000 0.00 0.00 36.28 4.02
425 426 0.179032 TGTCGTTGTGCCAATCCACT 60.179 50.000 0.00 0.00 36.68 4.00
426 427 1.070914 TGTCGTTGTGCCAATCCACTA 59.929 47.619 0.00 0.00 36.68 2.74
427 428 1.732259 GTCGTTGTGCCAATCCACTAG 59.268 52.381 0.00 0.00 36.68 2.57
428 429 1.086696 CGTTGTGCCAATCCACTAGG 58.913 55.000 0.00 0.00 36.68 3.02
435 436 3.388345 GCCAATCCACTAGGCTACTAC 57.612 52.381 0.00 0.00 44.92 2.73
436 437 2.966516 GCCAATCCACTAGGCTACTACT 59.033 50.000 0.00 0.00 44.92 2.57
437 438 3.388350 GCCAATCCACTAGGCTACTACTT 59.612 47.826 0.00 0.00 44.92 2.24
438 439 4.141688 GCCAATCCACTAGGCTACTACTTT 60.142 45.833 0.00 0.00 44.92 2.66
439 440 5.629366 GCCAATCCACTAGGCTACTACTTTT 60.629 44.000 0.00 0.00 44.92 2.27
440 441 6.415573 CCAATCCACTAGGCTACTACTTTTT 58.584 40.000 0.00 0.00 33.74 1.94
467 468 9.997482 TTTTTAATCCATTACAATAGAAGTCGC 57.003 29.630 0.00 0.00 0.00 5.19
468 469 7.724305 TTAATCCATTACAATAGAAGTCGCC 57.276 36.000 0.00 0.00 0.00 5.54
469 470 4.067972 TCCATTACAATAGAAGTCGCCC 57.932 45.455 0.00 0.00 0.00 6.13
470 471 3.709653 TCCATTACAATAGAAGTCGCCCT 59.290 43.478 0.00 0.00 0.00 5.19
471 472 4.897076 TCCATTACAATAGAAGTCGCCCTA 59.103 41.667 0.00 0.00 0.00 3.53
472 473 4.989168 CCATTACAATAGAAGTCGCCCTAC 59.011 45.833 0.00 0.00 0.00 3.18
473 474 4.660789 TTACAATAGAAGTCGCCCTACC 57.339 45.455 0.00 0.00 0.00 3.18
474 475 2.463752 ACAATAGAAGTCGCCCTACCA 58.536 47.619 0.00 0.00 0.00 3.25
475 476 3.039011 ACAATAGAAGTCGCCCTACCAT 58.961 45.455 0.00 0.00 0.00 3.55
476 477 3.454812 ACAATAGAAGTCGCCCTACCATT 59.545 43.478 0.00 0.00 0.00 3.16
477 478 4.080526 ACAATAGAAGTCGCCCTACCATTT 60.081 41.667 0.00 0.00 0.00 2.32
478 479 2.693267 AGAAGTCGCCCTACCATTTC 57.307 50.000 0.00 0.00 0.00 2.17
479 480 2.188817 AGAAGTCGCCCTACCATTTCT 58.811 47.619 0.00 0.00 0.00 2.52
480 481 2.168728 AGAAGTCGCCCTACCATTTCTC 59.831 50.000 0.00 0.00 0.00 2.87
481 482 0.460311 AGTCGCCCTACCATTTCTCG 59.540 55.000 0.00 0.00 0.00 4.04
482 483 0.529992 GTCGCCCTACCATTTCTCGG 60.530 60.000 0.00 0.00 0.00 4.63
483 484 1.227556 CGCCCTACCATTTCTCGGG 60.228 63.158 0.00 0.00 37.97 5.14
484 485 1.912971 GCCCTACCATTTCTCGGGT 59.087 57.895 0.00 0.00 41.21 5.28
485 486 0.463833 GCCCTACCATTTCTCGGGTG 60.464 60.000 0.00 0.00 38.06 4.61
486 487 1.200519 CCCTACCATTTCTCGGGTGA 58.799 55.000 0.00 0.00 38.06 4.02
487 488 1.557832 CCCTACCATTTCTCGGGTGAA 59.442 52.381 0.00 0.00 38.06 3.18
488 489 2.026636 CCCTACCATTTCTCGGGTGAAA 60.027 50.000 0.00 0.00 39.79 2.69
489 490 3.007635 CCTACCATTTCTCGGGTGAAAC 58.992 50.000 0.00 0.00 38.54 2.78
554 556 5.763876 ATGGGATAACTATAGACAAGGGC 57.236 43.478 6.78 0.00 0.00 5.19
565 567 2.352805 CAAGGGCCTGAGGGTGAC 59.647 66.667 6.92 0.00 34.45 3.67
576 578 4.530161 GCCTGAGGGTGACTTATAGATCAT 59.470 45.833 0.00 0.00 34.45 2.45
682 684 7.114849 AGATTCTTAGGATCTATGGAGAGGT 57.885 40.000 0.24 0.00 34.35 3.85
732 734 9.905713 ACAAAAGCTCCATATATTTCAGTTCTA 57.094 29.630 0.00 0.00 0.00 2.10
735 737 9.905713 AAAGCTCCATATATTTCAGTTCTAACA 57.094 29.630 0.00 0.00 0.00 2.41
736 738 8.894768 AGCTCCATATATTTCAGTTCTAACAC 57.105 34.615 0.00 0.00 0.00 3.32
737 739 8.709308 AGCTCCATATATTTCAGTTCTAACACT 58.291 33.333 0.00 0.00 0.00 3.55
738 740 8.983724 GCTCCATATATTTCAGTTCTAACACTC 58.016 37.037 0.00 0.00 0.00 3.51
739 741 9.482627 CTCCATATATTTCAGTTCTAACACTCC 57.517 37.037 0.00 0.00 0.00 3.85
740 742 9.213777 TCCATATATTTCAGTTCTAACACTCCT 57.786 33.333 0.00 0.00 0.00 3.69
741 743 9.265901 CCATATATTTCAGTTCTAACACTCCTG 57.734 37.037 0.00 0.00 0.00 3.86
745 747 7.913674 ATTTCAGTTCTAACACTCCTGATTC 57.086 36.000 0.00 0.00 32.63 2.52
746 748 5.060662 TCAGTTCTAACACTCCTGATTCG 57.939 43.478 0.00 0.00 0.00 3.34
747 749 4.523173 TCAGTTCTAACACTCCTGATTCGT 59.477 41.667 0.00 0.00 0.00 3.85
748 750 5.010719 TCAGTTCTAACACTCCTGATTCGTT 59.989 40.000 0.00 0.00 0.00 3.85
749 751 5.696724 CAGTTCTAACACTCCTGATTCGTTT 59.303 40.000 0.00 0.00 0.00 3.60
750 752 6.202954 CAGTTCTAACACTCCTGATTCGTTTT 59.797 38.462 0.00 0.00 0.00 2.43
751 753 6.766467 AGTTCTAACACTCCTGATTCGTTTTT 59.234 34.615 0.00 0.00 0.00 1.94
777 779 2.037121 TGCGAGAAACACTCCTGATTCA 59.963 45.455 0.00 0.00 42.18 2.57
786 788 5.432680 ACACTCCTGATTCATTGAGACAT 57.567 39.130 16.14 3.29 0.00 3.06
794 796 6.381481 TGATTCATTGAGACATGTTATGCC 57.619 37.500 0.00 0.00 0.00 4.40
803 805 1.545582 ACATGTTATGCCAGCAACACC 59.454 47.619 0.00 0.00 37.47 4.16
926 929 3.319689 CGTGGGAAAATACAAGGTTGGTT 59.680 43.478 0.00 0.00 0.00 3.67
933 936 6.995686 GGAAAATACAAGGTTGGTTGGAAAAT 59.004 34.615 0.00 0.00 0.00 1.82
1026 1029 5.136105 AGCACTTTTCTTCTGACCAAGAAT 58.864 37.500 0.00 0.00 44.02 2.40
1051 1054 7.506114 TGTTTGTAAGAGTCTTACTTCACCAT 58.494 34.615 32.68 2.21 0.00 3.55
1269 1273 1.041437 GCTACTTCCCCGCTACTGAT 58.959 55.000 0.00 0.00 0.00 2.90
1290 1294 0.459899 TCATGCAGGCTACTGTACCG 59.540 55.000 0.00 0.00 46.62 4.02
1421 1425 6.731467 ACAAGTGGATTCCAGGTACAATATT 58.269 36.000 5.39 0.00 32.34 1.28
1459 1463 1.719117 CCACAACACGCGACTGTTT 59.281 52.632 15.93 2.44 31.73 2.83
1586 1590 1.333636 CGGCAAGGAGGAGGAGATGT 61.334 60.000 0.00 0.00 0.00 3.06
1801 1805 3.610911 GTTCTTCGTGGAATTCTCCCAT 58.389 45.455 5.23 0.00 41.64 4.00
1809 1813 4.283467 CGTGGAATTCTCCCATATGAGGTA 59.717 45.833 3.65 0.00 41.64 3.08
1954 1958 2.517959 CTTGGTTTGGCCTCAGATTGA 58.482 47.619 3.32 0.00 38.35 2.57
1967 1971 4.021191 TCAGATTGACTCGTCTTCATCG 57.979 45.455 0.00 0.00 0.00 3.84
2013 2017 3.868757 TGTGATCCTCGGTTTACTGAG 57.131 47.619 11.04 11.04 46.39 3.35
2108 2112 0.680061 GGGAAGAATCCTACGGCGAT 59.320 55.000 16.62 0.00 45.77 4.58
2182 2186 3.009723 GCGATGATCTTTCCTGGTTTCA 58.990 45.455 0.00 0.00 0.00 2.69
2375 2380 3.126514 TCACTACGAGATGGAGTTCGTTC 59.873 47.826 4.81 0.00 46.87 3.95
2414 2419 3.680490 TCTCGCATGTGGTAATGGAAAA 58.320 40.909 6.39 0.00 0.00 2.29
2415 2420 4.269183 TCTCGCATGTGGTAATGGAAAAT 58.731 39.130 6.39 0.00 0.00 1.82
2434 2439 4.996788 AATTGATTGCTTGGAGATGGTC 57.003 40.909 0.00 0.00 0.00 4.02
2442 2447 1.751351 CTTGGAGATGGTCACGCTCTA 59.249 52.381 0.00 0.00 0.00 2.43
2460 2465 4.744570 CTCTAGAACACTCGCCACAATTA 58.255 43.478 0.00 0.00 0.00 1.40
2461 2466 5.339008 TCTAGAACACTCGCCACAATTAT 57.661 39.130 0.00 0.00 0.00 1.28
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.893808 CACACGGTGGCTTCAGCTT 60.894 57.895 13.48 0.00 41.70 3.74
1 2 2.281070 CACACGGTGGCTTCAGCT 60.281 61.111 13.48 0.00 41.70 4.24
11 12 3.358301 GCAGTAGCAGTACCACACGGT 62.358 57.143 0.00 0.00 44.77 4.83
12 13 0.736325 GCAGTAGCAGTACCACACGG 60.736 60.000 0.00 0.00 41.58 4.94
13 14 0.243907 AGCAGTAGCAGTACCACACG 59.756 55.000 0.00 0.00 45.49 4.49
14 15 2.492484 ACTAGCAGTAGCAGTACCACAC 59.508 50.000 0.00 0.00 45.49 3.82
15 16 2.803956 ACTAGCAGTAGCAGTACCACA 58.196 47.619 0.00 0.00 45.49 4.17
16 17 3.242673 CGTACTAGCAGTAGCAGTACCAC 60.243 52.174 16.74 0.00 43.97 4.16
17 18 2.941064 CGTACTAGCAGTAGCAGTACCA 59.059 50.000 16.74 0.00 43.97 3.25
18 19 2.290093 CCGTACTAGCAGTAGCAGTACC 59.710 54.545 16.74 6.89 43.97 3.34
19 20 2.941720 ACCGTACTAGCAGTAGCAGTAC 59.058 50.000 14.49 14.49 43.73 2.73
20 21 2.941064 CACCGTACTAGCAGTAGCAGTA 59.059 50.000 0.00 0.00 45.49 2.74
21 22 1.743958 CACCGTACTAGCAGTAGCAGT 59.256 52.381 0.00 0.00 45.49 4.40
22 23 1.534175 GCACCGTACTAGCAGTAGCAG 60.534 57.143 0.00 0.00 45.49 4.24
23 24 0.454600 GCACCGTACTAGCAGTAGCA 59.545 55.000 0.00 0.00 45.49 3.49
24 25 0.248949 GGCACCGTACTAGCAGTAGC 60.249 60.000 0.00 0.00 42.56 3.58
25 26 0.384669 GGGCACCGTACTAGCAGTAG 59.615 60.000 0.00 0.00 40.86 2.57
26 27 2.496942 GGGCACCGTACTAGCAGTA 58.503 57.895 0.00 0.00 40.86 2.74
27 28 3.295800 GGGCACCGTACTAGCAGT 58.704 61.111 0.00 0.00 40.86 4.40
41 42 3.984193 CTAGTGTGGCAGCAGGGGC 62.984 68.421 0.00 0.00 41.61 5.80
42 43 2.270205 CTAGTGTGGCAGCAGGGG 59.730 66.667 0.00 0.00 0.00 4.79
43 44 2.437359 GCTAGTGTGGCAGCAGGG 60.437 66.667 0.00 0.00 37.73 4.45
44 45 1.002868 AAGCTAGTGTGGCAGCAGG 60.003 57.895 0.00 0.00 40.36 4.85
45 46 0.321034 TGAAGCTAGTGTGGCAGCAG 60.321 55.000 0.00 0.00 40.36 4.24
46 47 0.325933 ATGAAGCTAGTGTGGCAGCA 59.674 50.000 0.00 0.00 40.36 4.41
47 48 1.012841 GATGAAGCTAGTGTGGCAGC 58.987 55.000 0.00 0.00 38.09 5.25
48 49 1.209019 AGGATGAAGCTAGTGTGGCAG 59.791 52.381 0.00 0.00 0.00 4.85
49 50 1.208052 GAGGATGAAGCTAGTGTGGCA 59.792 52.381 0.00 0.00 0.00 4.92
50 51 1.474143 GGAGGATGAAGCTAGTGTGGC 60.474 57.143 0.00 0.00 0.00 5.01
51 52 1.833630 TGGAGGATGAAGCTAGTGTGG 59.166 52.381 0.00 0.00 0.00 4.17
52 53 2.762887 TCTGGAGGATGAAGCTAGTGTG 59.237 50.000 0.00 0.00 0.00 3.82
53 54 3.030291 CTCTGGAGGATGAAGCTAGTGT 58.970 50.000 0.00 0.00 0.00 3.55
54 55 3.068024 GTCTCTGGAGGATGAAGCTAGTG 59.932 52.174 0.00 0.00 0.00 2.74
55 56 3.295973 GTCTCTGGAGGATGAAGCTAGT 58.704 50.000 0.00 0.00 0.00 2.57
56 57 2.627699 GGTCTCTGGAGGATGAAGCTAG 59.372 54.545 0.00 0.00 0.00 3.42
57 58 2.672098 GGTCTCTGGAGGATGAAGCTA 58.328 52.381 0.00 0.00 0.00 3.32
58 59 1.494960 GGTCTCTGGAGGATGAAGCT 58.505 55.000 0.00 0.00 0.00 3.74
59 60 0.103937 CGGTCTCTGGAGGATGAAGC 59.896 60.000 0.00 0.00 0.00 3.86
60 61 0.749649 CCGGTCTCTGGAGGATGAAG 59.250 60.000 0.00 0.00 0.00 3.02
61 62 0.335019 TCCGGTCTCTGGAGGATGAA 59.665 55.000 0.00 0.00 0.00 2.57
62 63 2.007576 TCCGGTCTCTGGAGGATGA 58.992 57.895 0.00 0.00 0.00 2.92
63 64 4.686695 TCCGGTCTCTGGAGGATG 57.313 61.111 0.00 0.00 0.00 3.51
68 69 2.363018 CTGCCTCCGGTCTCTGGA 60.363 66.667 0.00 0.00 0.00 3.86
69 70 2.363018 TCTGCCTCCGGTCTCTGG 60.363 66.667 0.00 0.00 0.00 3.86
70 71 2.422231 CCTCTGCCTCCGGTCTCTG 61.422 68.421 0.00 0.00 0.00 3.35
71 72 2.043450 CCTCTGCCTCCGGTCTCT 60.043 66.667 0.00 0.00 0.00 3.10
72 73 3.151022 CCCTCTGCCTCCGGTCTC 61.151 72.222 0.00 0.00 0.00 3.36
73 74 3.670629 CTCCCTCTGCCTCCGGTCT 62.671 68.421 0.00 0.00 0.00 3.85
74 75 3.151022 CTCCCTCTGCCTCCGGTC 61.151 72.222 0.00 0.00 0.00 4.79
77 78 2.959484 TTTGCTCCCTCTGCCTCCG 61.959 63.158 0.00 0.00 0.00 4.63
78 79 1.377856 GTTTGCTCCCTCTGCCTCC 60.378 63.158 0.00 0.00 0.00 4.30
79 80 0.250901 TTGTTTGCTCCCTCTGCCTC 60.251 55.000 0.00 0.00 0.00 4.70
80 81 0.185901 TTTGTTTGCTCCCTCTGCCT 59.814 50.000 0.00 0.00 0.00 4.75
81 82 1.260544 ATTTGTTTGCTCCCTCTGCC 58.739 50.000 0.00 0.00 0.00 4.85
82 83 3.084786 ACTATTTGTTTGCTCCCTCTGC 58.915 45.455 0.00 0.00 0.00 4.26
83 84 5.491982 ACTACTATTTGTTTGCTCCCTCTG 58.508 41.667 0.00 0.00 0.00 3.35
84 85 5.763876 ACTACTATTTGTTTGCTCCCTCT 57.236 39.130 0.00 0.00 0.00 3.69
85 86 6.641474 ACTACTACTATTTGTTTGCTCCCTC 58.359 40.000 0.00 0.00 0.00 4.30
86 87 6.622427 ACTACTACTATTTGTTTGCTCCCT 57.378 37.500 0.00 0.00 0.00 4.20
87 88 6.479331 GCTACTACTACTATTTGTTTGCTCCC 59.521 42.308 0.00 0.00 0.00 4.30
88 89 7.010275 GTGCTACTACTACTATTTGTTTGCTCC 59.990 40.741 0.00 0.00 0.00 4.70
89 90 7.760340 AGTGCTACTACTACTATTTGTTTGCTC 59.240 37.037 0.00 0.00 0.00 4.26
90 91 7.612677 AGTGCTACTACTACTATTTGTTTGCT 58.387 34.615 0.00 0.00 0.00 3.91
91 92 7.829378 AGTGCTACTACTACTATTTGTTTGC 57.171 36.000 0.00 0.00 0.00 3.68
93 94 9.991906 TCAAAGTGCTACTACTACTATTTGTTT 57.008 29.630 0.00 0.00 0.00 2.83
94 95 9.991906 TTCAAAGTGCTACTACTACTATTTGTT 57.008 29.630 0.00 0.00 0.00 2.83
97 98 9.517609 CGATTCAAAGTGCTACTACTACTATTT 57.482 33.333 0.00 0.00 0.00 1.40
98 99 7.648510 GCGATTCAAAGTGCTACTACTACTATT 59.351 37.037 0.00 0.00 0.00 1.73
99 100 7.140048 GCGATTCAAAGTGCTACTACTACTAT 58.860 38.462 0.00 0.00 0.00 2.12
100 101 6.094464 TGCGATTCAAAGTGCTACTACTACTA 59.906 38.462 0.00 0.00 0.00 1.82
101 102 5.105877 TGCGATTCAAAGTGCTACTACTACT 60.106 40.000 0.00 0.00 0.00 2.57
102 103 5.100259 TGCGATTCAAAGTGCTACTACTAC 58.900 41.667 0.00 0.00 0.00 2.73
103 104 5.319140 TGCGATTCAAAGTGCTACTACTA 57.681 39.130 0.00 0.00 0.00 1.82
104 105 4.188247 TGCGATTCAAAGTGCTACTACT 57.812 40.909 0.00 0.00 0.00 2.57
105 106 5.292101 AGAATGCGATTCAAAGTGCTACTAC 59.708 40.000 10.26 0.00 41.71 2.73
106 107 5.419542 AGAATGCGATTCAAAGTGCTACTA 58.580 37.500 10.26 0.00 41.71 1.82
107 108 4.256920 AGAATGCGATTCAAAGTGCTACT 58.743 39.130 10.26 0.00 41.71 2.57
108 109 4.582459 GAGAATGCGATTCAAAGTGCTAC 58.418 43.478 10.26 0.00 41.71 3.58
109 110 3.306973 CGAGAATGCGATTCAAAGTGCTA 59.693 43.478 10.26 0.00 41.71 3.49
110 111 2.094894 CGAGAATGCGATTCAAAGTGCT 59.905 45.455 10.26 0.00 41.71 4.40
111 112 2.434761 CGAGAATGCGATTCAAAGTGC 58.565 47.619 10.26 0.00 41.71 4.40
112 113 2.094894 AGCGAGAATGCGATTCAAAGTG 59.905 45.455 10.26 0.00 41.71 3.16
113 114 2.094894 CAGCGAGAATGCGATTCAAAGT 59.905 45.455 10.26 0.00 41.71 2.66
114 115 2.701807 CAGCGAGAATGCGATTCAAAG 58.298 47.619 10.26 4.05 41.71 2.77
115 116 1.202065 GCAGCGAGAATGCGATTCAAA 60.202 47.619 10.26 0.00 41.71 2.69
116 117 0.374758 GCAGCGAGAATGCGATTCAA 59.625 50.000 10.26 0.00 41.71 2.69
117 118 0.740516 TGCAGCGAGAATGCGATTCA 60.741 50.000 10.26 0.00 46.87 2.57
118 119 0.374758 TTGCAGCGAGAATGCGATTC 59.625 50.000 0.00 0.00 46.87 2.52
119 120 0.804364 TTTGCAGCGAGAATGCGATT 59.196 45.000 0.00 0.00 46.87 3.34
120 121 0.097674 GTTTGCAGCGAGAATGCGAT 59.902 50.000 0.00 0.00 46.87 4.58
121 122 1.227342 TGTTTGCAGCGAGAATGCGA 61.227 50.000 0.00 0.00 46.87 5.10
122 123 0.179181 ATGTTTGCAGCGAGAATGCG 60.179 50.000 0.00 0.00 46.87 4.73
123 124 1.986698 AATGTTTGCAGCGAGAATGC 58.013 45.000 0.00 0.00 44.11 3.56
124 125 3.853671 GGTAAATGTTTGCAGCGAGAATG 59.146 43.478 0.00 0.00 0.00 2.67
125 126 3.426159 CGGTAAATGTTTGCAGCGAGAAT 60.426 43.478 0.00 0.00 34.01 2.40
126 127 2.095969 CGGTAAATGTTTGCAGCGAGAA 60.096 45.455 0.00 0.00 34.01 2.87
127 128 1.463056 CGGTAAATGTTTGCAGCGAGA 59.537 47.619 0.00 0.00 34.01 4.04
128 129 1.463056 TCGGTAAATGTTTGCAGCGAG 59.537 47.619 0.00 0.00 36.15 5.03
129 130 1.514003 TCGGTAAATGTTTGCAGCGA 58.486 45.000 0.00 0.00 38.44 4.93
130 131 1.976045 GTTCGGTAAATGTTTGCAGCG 59.024 47.619 0.00 0.00 0.00 5.18
131 132 2.287909 TGGTTCGGTAAATGTTTGCAGC 60.288 45.455 0.00 0.00 0.00 5.25
132 133 3.634568 TGGTTCGGTAAATGTTTGCAG 57.365 42.857 0.00 0.00 0.00 4.41
133 134 4.386867 TTTGGTTCGGTAAATGTTTGCA 57.613 36.364 0.00 0.00 0.00 4.08
134 135 7.589574 AATATTTGGTTCGGTAAATGTTTGC 57.410 32.000 0.00 0.00 27.63 3.68
135 136 9.197694 TGAAATATTTGGTTCGGTAAATGTTTG 57.802 29.630 5.17 0.00 37.56 2.93
136 137 9.765795 TTGAAATATTTGGTTCGGTAAATGTTT 57.234 25.926 5.17 0.00 39.02 2.83
137 138 9.418045 CTTGAAATATTTGGTTCGGTAAATGTT 57.582 29.630 5.17 0.00 31.67 2.71
138 139 8.032451 CCTTGAAATATTTGGTTCGGTAAATGT 58.968 33.333 5.17 0.00 0.00 2.71
139 140 8.032451 ACCTTGAAATATTTGGTTCGGTAAATG 58.968 33.333 5.17 0.00 0.00 2.32
140 141 8.032451 CACCTTGAAATATTTGGTTCGGTAAAT 58.968 33.333 5.17 0.00 0.00 1.40
141 142 7.014422 ACACCTTGAAATATTTGGTTCGGTAAA 59.986 33.333 5.17 0.00 0.00 2.01
142 143 6.490721 ACACCTTGAAATATTTGGTTCGGTAA 59.509 34.615 5.17 0.00 0.00 2.85
143 144 6.005198 ACACCTTGAAATATTTGGTTCGGTA 58.995 36.000 5.17 0.00 0.00 4.02
144 145 4.830600 ACACCTTGAAATATTTGGTTCGGT 59.169 37.500 5.17 2.41 0.00 4.69
145 146 5.385509 ACACCTTGAAATATTTGGTTCGG 57.614 39.130 5.17 1.82 0.00 4.30
146 147 7.487829 CCATTACACCTTGAAATATTTGGTTCG 59.512 37.037 5.17 0.00 0.00 3.95
147 148 8.527810 TCCATTACACCTTGAAATATTTGGTTC 58.472 33.333 5.17 0.00 0.00 3.62
148 149 8.311109 GTCCATTACACCTTGAAATATTTGGTT 58.689 33.333 5.17 1.88 0.00 3.67
149 150 7.093509 GGTCCATTACACCTTGAAATATTTGGT 60.094 37.037 5.17 4.15 0.00 3.67
150 151 7.264947 GGTCCATTACACCTTGAAATATTTGG 58.735 38.462 5.17 3.48 0.00 3.28
151 152 6.972328 CGGTCCATTACACCTTGAAATATTTG 59.028 38.462 5.17 0.00 0.00 2.32
152 153 6.096282 CCGGTCCATTACACCTTGAAATATTT 59.904 38.462 0.00 0.00 0.00 1.40
153 154 5.592688 CCGGTCCATTACACCTTGAAATATT 59.407 40.000 0.00 0.00 0.00 1.28
154 155 5.130350 CCGGTCCATTACACCTTGAAATAT 58.870 41.667 0.00 0.00 0.00 1.28
155 156 4.019141 ACCGGTCCATTACACCTTGAAATA 60.019 41.667 0.00 0.00 0.00 1.40
156 157 3.245122 ACCGGTCCATTACACCTTGAAAT 60.245 43.478 0.00 0.00 0.00 2.17
157 158 2.106857 ACCGGTCCATTACACCTTGAAA 59.893 45.455 0.00 0.00 0.00 2.69
158 159 1.700739 ACCGGTCCATTACACCTTGAA 59.299 47.619 0.00 0.00 0.00 2.69
159 160 1.354101 ACCGGTCCATTACACCTTGA 58.646 50.000 0.00 0.00 0.00 3.02
160 161 1.810151 CAACCGGTCCATTACACCTTG 59.190 52.381 8.04 0.00 0.00 3.61
161 162 1.422402 ACAACCGGTCCATTACACCTT 59.578 47.619 8.04 0.00 0.00 3.50
162 163 1.061546 ACAACCGGTCCATTACACCT 58.938 50.000 8.04 0.00 0.00 4.00
163 164 1.161843 CACAACCGGTCCATTACACC 58.838 55.000 8.04 0.00 0.00 4.16
164 165 1.802365 GTCACAACCGGTCCATTACAC 59.198 52.381 8.04 0.00 0.00 2.90
165 166 1.605968 CGTCACAACCGGTCCATTACA 60.606 52.381 8.04 0.00 0.00 2.41
166 167 1.073177 CGTCACAACCGGTCCATTAC 58.927 55.000 8.04 2.01 0.00 1.89
167 168 0.680618 ACGTCACAACCGGTCCATTA 59.319 50.000 8.04 0.00 0.00 1.90
168 169 0.179040 AACGTCACAACCGGTCCATT 60.179 50.000 8.04 0.00 0.00 3.16
169 170 0.601841 GAACGTCACAACCGGTCCAT 60.602 55.000 8.04 0.00 36.05 3.41
170 171 1.227321 GAACGTCACAACCGGTCCA 60.227 57.895 8.04 0.00 36.05 4.02
171 172 2.305127 CGAACGTCACAACCGGTCC 61.305 63.158 8.04 0.00 38.79 4.46
172 173 1.589727 ACGAACGTCACAACCGGTC 60.590 57.895 8.04 0.00 38.63 4.79
173 174 1.879430 CACGAACGTCACAACCGGT 60.879 57.895 0.00 0.00 0.00 5.28
174 175 2.591311 CCACGAACGTCACAACCGG 61.591 63.158 0.00 0.00 0.00 5.28
175 176 2.591311 CCCACGAACGTCACAACCG 61.591 63.158 0.00 0.00 0.00 4.44
176 177 1.091197 AACCCACGAACGTCACAACC 61.091 55.000 0.00 0.00 0.00 3.77
177 178 0.728542 AAACCCACGAACGTCACAAC 59.271 50.000 0.00 0.00 0.00 3.32
178 179 0.727970 CAAACCCACGAACGTCACAA 59.272 50.000 0.00 0.00 0.00 3.33
179 180 1.090625 CCAAACCCACGAACGTCACA 61.091 55.000 0.00 0.00 0.00 3.58
180 181 1.644913 CCAAACCCACGAACGTCAC 59.355 57.895 0.00 0.00 0.00 3.67
181 182 1.524165 CCCAAACCCACGAACGTCA 60.524 57.895 0.00 0.00 0.00 4.35
182 183 0.814812 TTCCCAAACCCACGAACGTC 60.815 55.000 0.00 0.00 0.00 4.34
183 184 1.096967 GTTCCCAAACCCACGAACGT 61.097 55.000 0.00 0.00 0.00 3.99
184 185 0.816421 AGTTCCCAAACCCACGAACG 60.816 55.000 0.00 0.00 39.63 3.95
185 186 0.949397 GAGTTCCCAAACCCACGAAC 59.051 55.000 0.00 0.00 35.92 3.95
186 187 0.533308 CGAGTTCCCAAACCCACGAA 60.533 55.000 0.00 0.00 35.92 3.85
187 188 1.070105 CGAGTTCCCAAACCCACGA 59.930 57.895 0.00 0.00 35.92 4.35
188 189 0.816421 AACGAGTTCCCAAACCCACG 60.816 55.000 0.00 0.00 35.92 4.94
189 190 0.949397 GAACGAGTTCCCAAACCCAC 59.051 55.000 4.72 0.00 35.92 4.61
190 191 0.533308 CGAACGAGTTCCCAAACCCA 60.533 55.000 10.03 0.00 35.92 4.51
191 192 0.249996 TCGAACGAGTTCCCAAACCC 60.250 55.000 10.03 0.00 35.92 4.11
192 193 1.804601 ATCGAACGAGTTCCCAAACC 58.195 50.000 10.03 0.00 35.92 3.27
193 194 5.809051 AGTATTATCGAACGAGTTCCCAAAC 59.191 40.000 10.03 2.70 36.27 2.93
194 195 5.969423 AGTATTATCGAACGAGTTCCCAAA 58.031 37.500 10.03 3.04 36.27 3.28
195 196 5.587388 AGTATTATCGAACGAGTTCCCAA 57.413 39.130 10.03 3.03 36.27 4.12
196 197 6.889301 ATAGTATTATCGAACGAGTTCCCA 57.111 37.500 10.03 0.00 36.27 4.37
197 198 9.122613 GTTTATAGTATTATCGAACGAGTTCCC 57.877 37.037 10.03 0.00 36.27 3.97
198 199 9.122613 GGTTTATAGTATTATCGAACGAGTTCC 57.877 37.037 10.03 0.00 36.27 3.62
199 200 9.669353 TGGTTTATAGTATTATCGAACGAGTTC 57.331 33.333 5.93 5.93 36.29 3.01
214 215 9.454585 CGACAGACGAAATTATGGTTTATAGTA 57.545 33.333 0.00 0.00 45.77 1.82
215 216 7.437267 CCGACAGACGAAATTATGGTTTATAGT 59.563 37.037 0.00 0.00 45.77 2.12
216 217 7.650504 TCCGACAGACGAAATTATGGTTTATAG 59.349 37.037 0.00 0.00 45.77 1.31
217 218 7.490840 TCCGACAGACGAAATTATGGTTTATA 58.509 34.615 0.00 0.00 45.77 0.98
218 219 6.342906 TCCGACAGACGAAATTATGGTTTAT 58.657 36.000 0.00 0.00 45.77 1.40
219 220 5.722263 TCCGACAGACGAAATTATGGTTTA 58.278 37.500 0.00 0.00 45.77 2.01
220 221 4.571919 TCCGACAGACGAAATTATGGTTT 58.428 39.130 0.00 0.00 45.77 3.27
221 222 4.196626 TCCGACAGACGAAATTATGGTT 57.803 40.909 0.00 0.00 45.77 3.67
222 223 3.880047 TCCGACAGACGAAATTATGGT 57.120 42.857 0.00 0.00 45.77 3.55
223 224 3.930229 TGTTCCGACAGACGAAATTATGG 59.070 43.478 0.00 0.00 45.77 2.74
224 225 5.718649 ATGTTCCGACAGACGAAATTATG 57.281 39.130 0.00 0.00 45.77 1.90
225 226 5.005394 CGAATGTTCCGACAGACGAAATTAT 59.995 40.000 0.00 0.00 45.77 1.28
226 227 4.325204 CGAATGTTCCGACAGACGAAATTA 59.675 41.667 0.00 0.00 45.77 1.40
227 228 3.122948 CGAATGTTCCGACAGACGAAATT 59.877 43.478 0.00 0.00 45.77 1.82
228 229 2.666508 CGAATGTTCCGACAGACGAAAT 59.333 45.455 0.00 0.00 45.77 2.17
229 230 2.055838 CGAATGTTCCGACAGACGAAA 58.944 47.619 0.00 0.00 45.77 3.46
230 231 1.001048 ACGAATGTTCCGACAGACGAA 60.001 47.619 12.38 0.00 45.77 3.85
231 232 0.594602 ACGAATGTTCCGACAGACGA 59.405 50.000 12.38 0.00 45.77 4.20
232 233 0.982673 GACGAATGTTCCGACAGACG 59.017 55.000 0.00 0.00 39.58 4.18
233 234 2.060326 TGACGAATGTTCCGACAGAC 57.940 50.000 0.00 0.00 39.58 3.51
234 235 2.295070 TCTTGACGAATGTTCCGACAGA 59.705 45.455 0.00 0.00 39.58 3.41
235 236 2.672714 TCTTGACGAATGTTCCGACAG 58.327 47.619 0.00 0.00 39.58 3.51
236 237 2.804697 TCTTGACGAATGTTCCGACA 57.195 45.000 0.00 0.00 40.71 4.35
237 238 2.348666 CCATCTTGACGAATGTTCCGAC 59.651 50.000 0.00 0.00 0.00 4.79
238 239 2.616960 CCATCTTGACGAATGTTCCGA 58.383 47.619 0.00 0.00 0.00 4.55
239 240 1.062587 GCCATCTTGACGAATGTTCCG 59.937 52.381 0.00 0.00 0.00 4.30
240 241 1.401905 GGCCATCTTGACGAATGTTCC 59.598 52.381 0.00 0.00 0.00 3.62
241 242 1.062587 CGGCCATCTTGACGAATGTTC 59.937 52.381 2.24 0.00 0.00 3.18
242 243 1.086696 CGGCCATCTTGACGAATGTT 58.913 50.000 2.24 0.00 0.00 2.71
243 244 0.249120 TCGGCCATCTTGACGAATGT 59.751 50.000 2.24 0.00 31.79 2.71
244 245 0.933097 CTCGGCCATCTTGACGAATG 59.067 55.000 2.24 0.00 34.70 2.67
245 246 0.537188 ACTCGGCCATCTTGACGAAT 59.463 50.000 2.24 0.00 34.70 3.34
246 247 0.320374 AACTCGGCCATCTTGACGAA 59.680 50.000 2.24 0.00 34.70 3.85
247 248 0.389817 CAACTCGGCCATCTTGACGA 60.390 55.000 2.24 0.00 0.00 4.20
248 249 1.361668 CCAACTCGGCCATCTTGACG 61.362 60.000 2.24 0.00 0.00 4.35
249 250 0.321653 ACCAACTCGGCCATCTTGAC 60.322 55.000 2.24 0.00 39.03 3.18
250 251 0.036388 GACCAACTCGGCCATCTTGA 60.036 55.000 2.24 0.00 39.03 3.02
251 252 0.036010 AGACCAACTCGGCCATCTTG 60.036 55.000 2.24 0.00 39.03 3.02
252 253 1.568504 TAGACCAACTCGGCCATCTT 58.431 50.000 2.24 0.00 39.03 2.40
253 254 1.482593 CTTAGACCAACTCGGCCATCT 59.517 52.381 2.24 0.00 39.03 2.90
254 255 1.473434 CCTTAGACCAACTCGGCCATC 60.473 57.143 2.24 0.00 39.03 3.51
255 256 0.541863 CCTTAGACCAACTCGGCCAT 59.458 55.000 2.24 0.00 39.03 4.40
256 257 1.980052 CCTTAGACCAACTCGGCCA 59.020 57.895 2.24 0.00 39.03 5.36
257 258 1.449778 GCCTTAGACCAACTCGGCC 60.450 63.158 0.00 0.00 38.53 6.13
258 259 1.810030 CGCCTTAGACCAACTCGGC 60.810 63.158 0.00 0.00 39.99 5.54
259 260 1.810030 GCGCCTTAGACCAACTCGG 60.810 63.158 0.00 0.00 42.50 4.63
260 261 1.810030 GGCGCCTTAGACCAACTCG 60.810 63.158 22.15 0.00 0.00 4.18
261 262 0.741221 CTGGCGCCTTAGACCAACTC 60.741 60.000 29.70 0.00 31.81 3.01
262 263 1.296715 CTGGCGCCTTAGACCAACT 59.703 57.895 29.70 0.00 31.81 3.16
263 264 0.605589 AACTGGCGCCTTAGACCAAC 60.606 55.000 29.70 0.00 31.81 3.77
264 265 0.109723 AAACTGGCGCCTTAGACCAA 59.890 50.000 29.70 2.78 31.81 3.67
265 266 0.321298 GAAACTGGCGCCTTAGACCA 60.321 55.000 29.70 3.67 0.00 4.02
266 267 0.321298 TGAAACTGGCGCCTTAGACC 60.321 55.000 29.70 12.75 0.00 3.85
267 268 1.079503 CTGAAACTGGCGCCTTAGAC 58.920 55.000 29.70 16.31 0.00 2.59
268 269 0.036388 CCTGAAACTGGCGCCTTAGA 60.036 55.000 29.70 5.90 0.00 2.10
269 270 0.321653 ACCTGAAACTGGCGCCTTAG 60.322 55.000 29.70 20.37 0.00 2.18
270 271 0.978151 TACCTGAAACTGGCGCCTTA 59.022 50.000 29.70 7.24 0.00 2.69
271 272 0.605589 GTACCTGAAACTGGCGCCTT 60.606 55.000 29.70 14.38 0.00 4.35
272 273 1.003718 GTACCTGAAACTGGCGCCT 60.004 57.895 29.70 6.86 0.00 5.52
273 274 1.003718 AGTACCTGAAACTGGCGCC 60.004 57.895 22.73 22.73 0.00 6.53
274 275 2.162716 CAGTACCTGAAACTGGCGC 58.837 57.895 0.00 0.00 40.56 6.53
278 279 1.616865 TCGGACCAGTACCTGAAACTG 59.383 52.381 0.00 0.00 43.26 3.16
279 280 2.005370 TCGGACCAGTACCTGAAACT 57.995 50.000 0.00 0.00 32.44 2.66
280 281 2.825861 TTCGGACCAGTACCTGAAAC 57.174 50.000 0.00 0.00 32.44 2.78
281 282 2.038033 CCTTTCGGACCAGTACCTGAAA 59.962 50.000 0.00 0.00 32.44 2.69
282 283 1.621814 CCTTTCGGACCAGTACCTGAA 59.378 52.381 0.00 0.00 32.44 3.02
283 284 1.263356 CCTTTCGGACCAGTACCTGA 58.737 55.000 0.00 0.00 32.44 3.86
284 285 0.249398 CCCTTTCGGACCAGTACCTG 59.751 60.000 0.00 0.00 0.00 4.00
285 286 1.551019 GCCCTTTCGGACCAGTACCT 61.551 60.000 0.00 0.00 0.00 3.08
286 287 1.078637 GCCCTTTCGGACCAGTACC 60.079 63.158 0.00 0.00 0.00 3.34
287 288 1.447314 CGCCCTTTCGGACCAGTAC 60.447 63.158 0.00 0.00 0.00 2.73
288 289 1.909781 ACGCCCTTTCGGACCAGTA 60.910 57.895 0.00 0.00 0.00 2.74
289 290 3.239253 ACGCCCTTTCGGACCAGT 61.239 61.111 0.00 0.00 0.00 4.00
290 291 2.742372 CACGCCCTTTCGGACCAG 60.742 66.667 0.00 0.00 0.00 4.00
291 292 4.323477 CCACGCCCTTTCGGACCA 62.323 66.667 0.00 0.00 0.00 4.02
293 294 3.837570 AACCCACGCCCTTTCGGAC 62.838 63.158 0.00 0.00 0.00 4.79
294 295 3.540367 GAACCCACGCCCTTTCGGA 62.540 63.158 0.00 0.00 0.00 4.55
295 296 3.053896 GAACCCACGCCCTTTCGG 61.054 66.667 0.00 0.00 0.00 4.30
296 297 1.448922 TTTGAACCCACGCCCTTTCG 61.449 55.000 0.00 0.00 0.00 3.46
297 298 0.966179 ATTTGAACCCACGCCCTTTC 59.034 50.000 0.00 0.00 0.00 2.62
298 299 0.966179 GATTTGAACCCACGCCCTTT 59.034 50.000 0.00 0.00 0.00 3.11
299 300 0.898326 GGATTTGAACCCACGCCCTT 60.898 55.000 0.00 0.00 0.00 3.95
300 301 1.304134 GGATTTGAACCCACGCCCT 60.304 57.895 0.00 0.00 0.00 5.19
301 302 2.348104 GGGATTTGAACCCACGCCC 61.348 63.158 0.00 0.00 46.05 6.13
302 303 3.284336 GGGATTTGAACCCACGCC 58.716 61.111 0.00 0.00 46.05 5.68
307 308 2.820197 GTCAAGAGTGGGATTTGAACCC 59.180 50.000 0.00 0.00 46.87 4.11
308 309 3.486383 TGTCAAGAGTGGGATTTGAACC 58.514 45.455 0.00 0.00 33.10 3.62
309 310 5.712152 ATTGTCAAGAGTGGGATTTGAAC 57.288 39.130 0.00 0.00 33.10 3.18
310 311 6.550854 AGAAATTGTCAAGAGTGGGATTTGAA 59.449 34.615 0.00 0.00 33.10 2.69
311 312 6.070656 AGAAATTGTCAAGAGTGGGATTTGA 58.929 36.000 0.00 0.00 0.00 2.69
312 313 6.208204 AGAGAAATTGTCAAGAGTGGGATTTG 59.792 38.462 0.00 0.00 0.00 2.32
313 314 6.310149 AGAGAAATTGTCAAGAGTGGGATTT 58.690 36.000 0.00 0.00 0.00 2.17
314 315 5.885465 AGAGAAATTGTCAAGAGTGGGATT 58.115 37.500 0.00 0.00 0.00 3.01
315 316 5.511386 AGAGAAATTGTCAAGAGTGGGAT 57.489 39.130 0.00 0.00 0.00 3.85
316 317 4.982241 AGAGAAATTGTCAAGAGTGGGA 57.018 40.909 0.00 0.00 0.00 4.37
317 318 6.396829 AAAAGAGAAATTGTCAAGAGTGGG 57.603 37.500 0.00 0.00 0.00 4.61
318 319 9.971922 ATTAAAAAGAGAAATTGTCAAGAGTGG 57.028 29.630 0.00 0.00 0.00 4.00
330 331 8.401709 GCCTCTTCGATGATTAAAAAGAGAAAT 58.598 33.333 11.04 0.00 43.55 2.17
331 332 7.148239 GGCCTCTTCGATGATTAAAAAGAGAAA 60.148 37.037 11.04 0.00 43.55 2.52
332 333 6.316390 GGCCTCTTCGATGATTAAAAAGAGAA 59.684 38.462 11.04 1.54 43.55 2.87
333 334 5.817816 GGCCTCTTCGATGATTAAAAAGAGA 59.182 40.000 11.04 0.00 43.55 3.10
334 335 5.277058 CGGCCTCTTCGATGATTAAAAAGAG 60.277 44.000 0.00 0.00 41.56 2.85
335 336 4.570772 CGGCCTCTTCGATGATTAAAAAGA 59.429 41.667 0.00 0.00 0.00 2.52
336 337 4.260784 CCGGCCTCTTCGATGATTAAAAAG 60.261 45.833 0.00 0.00 0.00 2.27
337 338 3.625764 CCGGCCTCTTCGATGATTAAAAA 59.374 43.478 0.00 0.00 0.00 1.94
338 339 3.202906 CCGGCCTCTTCGATGATTAAAA 58.797 45.455 0.00 0.00 0.00 1.52
339 340 2.833794 CCGGCCTCTTCGATGATTAAA 58.166 47.619 0.00 0.00 0.00 1.52
340 341 1.540363 GCCGGCCTCTTCGATGATTAA 60.540 52.381 18.11 0.00 0.00 1.40
341 342 0.033504 GCCGGCCTCTTCGATGATTA 59.966 55.000 18.11 0.00 0.00 1.75
342 343 1.227674 GCCGGCCTCTTCGATGATT 60.228 57.895 18.11 0.00 0.00 2.57
343 344 2.423446 GCCGGCCTCTTCGATGAT 59.577 61.111 18.11 0.00 0.00 2.45
344 345 3.074369 TGCCGGCCTCTTCGATGA 61.074 61.111 26.77 0.00 0.00 2.92
345 346 2.892425 GTGCCGGCCTCTTCGATG 60.892 66.667 26.77 0.00 0.00 3.84
346 347 2.257409 AATGTGCCGGCCTCTTCGAT 62.257 55.000 26.77 3.78 0.00 3.59
347 348 2.463589 AAATGTGCCGGCCTCTTCGA 62.464 55.000 26.77 0.00 0.00 3.71
348 349 1.982073 GAAATGTGCCGGCCTCTTCG 61.982 60.000 26.77 0.00 0.00 3.79
349 350 1.803289 GAAATGTGCCGGCCTCTTC 59.197 57.895 26.77 17.04 0.00 2.87
350 351 2.040544 CGAAATGTGCCGGCCTCTT 61.041 57.895 26.77 12.10 0.00 2.85
351 352 2.436646 CGAAATGTGCCGGCCTCT 60.437 61.111 26.77 4.69 0.00 3.69
352 353 3.508840 CCGAAATGTGCCGGCCTC 61.509 66.667 26.77 17.83 39.22 4.70
353 354 2.837031 ATTCCGAAATGTGCCGGCCT 62.837 55.000 26.77 5.57 44.96 5.19
354 355 2.336400 GATTCCGAAATGTGCCGGCC 62.336 60.000 26.77 16.24 44.96 6.13
355 356 1.064134 GATTCCGAAATGTGCCGGC 59.936 57.895 22.73 22.73 44.96 6.13
356 357 1.024271 ATGATTCCGAAATGTGCCGG 58.976 50.000 0.00 0.00 46.57 6.13
357 358 1.670295 TCATGATTCCGAAATGTGCCG 59.330 47.619 0.00 0.00 0.00 5.69
358 359 2.684881 AGTCATGATTCCGAAATGTGCC 59.315 45.455 0.00 0.00 0.00 5.01
359 360 5.446709 CATAGTCATGATTCCGAAATGTGC 58.553 41.667 0.00 0.00 33.67 4.57
360 361 5.007921 TGCATAGTCATGATTCCGAAATGTG 59.992 40.000 0.00 0.00 33.67 3.21
361 362 5.125356 TGCATAGTCATGATTCCGAAATGT 58.875 37.500 0.00 0.00 33.67 2.71
362 363 5.678132 TGCATAGTCATGATTCCGAAATG 57.322 39.130 0.00 0.00 33.67 2.32
363 364 5.277490 CGTTGCATAGTCATGATTCCGAAAT 60.277 40.000 0.00 0.00 33.67 2.17
364 365 4.033932 CGTTGCATAGTCATGATTCCGAAA 59.966 41.667 0.00 0.00 33.67 3.46
365 366 3.555547 CGTTGCATAGTCATGATTCCGAA 59.444 43.478 0.00 0.00 33.67 4.30
366 367 3.123050 CGTTGCATAGTCATGATTCCGA 58.877 45.455 0.00 0.00 33.67 4.55
367 368 2.348872 GCGTTGCATAGTCATGATTCCG 60.349 50.000 0.00 0.00 33.67 4.30
368 369 2.031682 GGCGTTGCATAGTCATGATTCC 60.032 50.000 0.00 0.00 33.67 3.01
369 370 2.348872 CGGCGTTGCATAGTCATGATTC 60.349 50.000 0.00 0.00 33.67 2.52
370 371 1.599071 CGGCGTTGCATAGTCATGATT 59.401 47.619 0.00 0.00 33.67 2.57
371 372 1.220529 CGGCGTTGCATAGTCATGAT 58.779 50.000 0.00 0.00 33.67 2.45
372 373 0.108377 ACGGCGTTGCATAGTCATGA 60.108 50.000 6.77 0.00 33.67 3.07
373 374 0.726827 AACGGCGTTGCATAGTCATG 59.273 50.000 26.22 0.00 35.07 3.07
374 375 1.448985 AAACGGCGTTGCATAGTCAT 58.551 45.000 27.50 3.75 0.00 3.06
375 376 1.231221 AAAACGGCGTTGCATAGTCA 58.769 45.000 27.50 0.00 0.00 3.41
376 377 2.414138 AGTAAAACGGCGTTGCATAGTC 59.586 45.455 27.50 12.16 0.00 2.59
377 378 2.414138 GAGTAAAACGGCGTTGCATAGT 59.586 45.455 27.50 20.44 0.00 2.12
378 379 2.671396 AGAGTAAAACGGCGTTGCATAG 59.329 45.455 27.50 0.00 0.00 2.23
379 380 2.413796 CAGAGTAAAACGGCGTTGCATA 59.586 45.455 27.50 16.43 0.00 3.14
380 381 1.196808 CAGAGTAAAACGGCGTTGCAT 59.803 47.619 27.50 17.46 0.00 3.96
381 382 0.584396 CAGAGTAAAACGGCGTTGCA 59.416 50.000 27.50 14.20 0.00 4.08
382 383 0.724785 GCAGAGTAAAACGGCGTTGC 60.725 55.000 27.50 19.94 0.00 4.17
383 384 0.865769 AGCAGAGTAAAACGGCGTTG 59.134 50.000 27.50 13.72 34.06 4.10
384 385 1.145803 GAGCAGAGTAAAACGGCGTT 58.854 50.000 21.19 21.19 34.06 4.84
385 386 0.669625 GGAGCAGAGTAAAACGGCGT 60.670 55.000 6.77 6.77 34.06 5.68
386 387 1.683790 CGGAGCAGAGTAAAACGGCG 61.684 60.000 4.80 4.80 34.06 6.46
387 388 0.669625 ACGGAGCAGAGTAAAACGGC 60.670 55.000 0.00 0.00 0.00 5.68
388 389 1.068474 CACGGAGCAGAGTAAAACGG 58.932 55.000 0.00 0.00 0.00 4.44
389 390 1.719780 GACACGGAGCAGAGTAAAACG 59.280 52.381 0.00 0.00 0.00 3.60
390 391 1.719780 CGACACGGAGCAGAGTAAAAC 59.280 52.381 0.00 0.00 0.00 2.43
391 392 1.338973 ACGACACGGAGCAGAGTAAAA 59.661 47.619 0.00 0.00 0.00 1.52
392 393 0.956633 ACGACACGGAGCAGAGTAAA 59.043 50.000 0.00 0.00 0.00 2.01
393 394 0.956633 AACGACACGGAGCAGAGTAA 59.043 50.000 0.00 0.00 0.00 2.24
394 395 0.240145 CAACGACACGGAGCAGAGTA 59.760 55.000 0.00 0.00 0.00 2.59
395 396 1.007271 CAACGACACGGAGCAGAGT 60.007 57.895 0.00 0.00 0.00 3.24
396 397 1.007271 ACAACGACACGGAGCAGAG 60.007 57.895 0.00 0.00 0.00 3.35
397 398 1.299850 CACAACGACACGGAGCAGA 60.300 57.895 0.00 0.00 0.00 4.26
398 399 2.943345 GCACAACGACACGGAGCAG 61.943 63.158 0.00 0.00 0.00 4.24
399 400 2.964925 GCACAACGACACGGAGCA 60.965 61.111 0.00 0.00 0.00 4.26
400 401 3.712881 GGCACAACGACACGGAGC 61.713 66.667 0.00 0.00 0.00 4.70
401 402 2.279851 TGGCACAACGACACGGAG 60.280 61.111 0.00 0.00 31.92 4.63
406 407 5.977888 CCTAGTGGATTGGCACAACGACA 62.978 52.174 0.00 0.00 38.83 4.35
407 408 3.505723 CCTAGTGGATTGGCACAACGAC 61.506 54.545 0.00 0.00 38.83 4.34
408 409 1.338674 CCTAGTGGATTGGCACAACGA 60.339 52.381 0.00 0.00 38.83 3.85
409 410 1.086696 CCTAGTGGATTGGCACAACG 58.913 55.000 0.00 0.00 38.83 4.10
416 417 5.615925 AAAGTAGTAGCCTAGTGGATTGG 57.384 43.478 0.00 0.00 32.27 3.16
441 442 9.997482 GCGACTTCTATTGTAATGGATTAAAAA 57.003 29.630 0.00 0.00 0.00 1.94
442 443 8.617809 GGCGACTTCTATTGTAATGGATTAAAA 58.382 33.333 0.00 0.00 0.00 1.52
443 444 7.227910 GGGCGACTTCTATTGTAATGGATTAAA 59.772 37.037 0.00 0.00 0.00 1.52
444 445 6.708949 GGGCGACTTCTATTGTAATGGATTAA 59.291 38.462 0.00 0.00 0.00 1.40
445 446 6.042781 AGGGCGACTTCTATTGTAATGGATTA 59.957 38.462 0.00 0.00 0.00 1.75
446 447 5.063880 GGGCGACTTCTATTGTAATGGATT 58.936 41.667 0.00 0.00 0.00 3.01
447 448 4.348168 AGGGCGACTTCTATTGTAATGGAT 59.652 41.667 0.00 0.00 0.00 3.41
448 449 3.709653 AGGGCGACTTCTATTGTAATGGA 59.290 43.478 0.00 0.00 0.00 3.41
449 450 4.073293 AGGGCGACTTCTATTGTAATGG 57.927 45.455 0.00 0.00 0.00 3.16
450 451 4.989168 GGTAGGGCGACTTCTATTGTAATG 59.011 45.833 0.00 0.00 0.00 1.90
451 452 4.652421 TGGTAGGGCGACTTCTATTGTAAT 59.348 41.667 0.00 0.00 0.00 1.89
452 453 4.025360 TGGTAGGGCGACTTCTATTGTAA 58.975 43.478 0.00 0.00 0.00 2.41
453 454 3.634504 TGGTAGGGCGACTTCTATTGTA 58.365 45.455 0.00 0.00 0.00 2.41
454 455 2.463752 TGGTAGGGCGACTTCTATTGT 58.536 47.619 0.00 0.00 0.00 2.71
455 456 3.753294 ATGGTAGGGCGACTTCTATTG 57.247 47.619 0.00 0.00 0.00 1.90
456 457 4.409247 AGAAATGGTAGGGCGACTTCTATT 59.591 41.667 0.00 0.00 30.79 1.73
457 458 3.967987 AGAAATGGTAGGGCGACTTCTAT 59.032 43.478 0.00 0.00 0.00 1.98
458 459 3.371965 AGAAATGGTAGGGCGACTTCTA 58.628 45.455 0.00 0.00 0.00 2.10
459 460 2.168728 GAGAAATGGTAGGGCGACTTCT 59.831 50.000 0.00 0.00 0.00 2.85
460 461 2.552031 GAGAAATGGTAGGGCGACTTC 58.448 52.381 0.00 0.00 0.00 3.01
461 462 1.134788 CGAGAAATGGTAGGGCGACTT 60.135 52.381 0.00 0.00 0.00 3.01
462 463 0.460311 CGAGAAATGGTAGGGCGACT 59.540 55.000 0.00 0.00 0.00 4.18
463 464 0.529992 CCGAGAAATGGTAGGGCGAC 60.530 60.000 0.00 0.00 0.00 5.19
464 465 1.682451 CCCGAGAAATGGTAGGGCGA 61.682 60.000 0.00 0.00 35.09 5.54
465 466 1.227556 CCCGAGAAATGGTAGGGCG 60.228 63.158 0.00 0.00 35.09 6.13
466 467 0.463833 CACCCGAGAAATGGTAGGGC 60.464 60.000 0.00 0.00 45.75 5.19
468 469 3.007635 GTTTCACCCGAGAAATGGTAGG 58.992 50.000 0.00 0.00 39.46 3.18
469 470 3.007635 GGTTTCACCCGAGAAATGGTAG 58.992 50.000 0.00 0.00 39.46 3.18
470 471 2.372504 TGGTTTCACCCGAGAAATGGTA 59.627 45.455 0.00 0.00 39.46 3.25
471 472 1.144093 TGGTTTCACCCGAGAAATGGT 59.856 47.619 0.00 0.00 39.46 3.55
472 473 1.539827 GTGGTTTCACCCGAGAAATGG 59.460 52.381 0.00 0.00 39.46 3.16
473 474 1.196808 CGTGGTTTCACCCGAGAAATG 59.803 52.381 0.00 0.00 39.46 2.32
474 475 1.519408 CGTGGTTTCACCCGAGAAAT 58.481 50.000 0.00 0.00 39.46 2.17
475 476 0.533308 CCGTGGTTTCACCCGAGAAA 60.533 55.000 5.65 0.00 40.65 2.52
476 477 1.070105 CCGTGGTTTCACCCGAGAA 59.930 57.895 5.65 0.00 40.65 2.87
477 478 1.688269 AACCGTGGTTTCACCCGAGA 61.688 55.000 0.00 0.00 40.65 4.04
478 479 1.227734 AACCGTGGTTTCACCCGAG 60.228 57.895 0.00 0.60 40.65 4.63
479 480 1.524165 CAACCGTGGTTTCACCCGA 60.524 57.895 0.44 0.00 40.65 5.14
480 481 2.548295 CCAACCGTGGTTTCACCCG 61.548 63.158 0.44 0.00 40.42 5.28
481 482 3.439008 CCAACCGTGGTTTCACCC 58.561 61.111 0.44 0.00 40.42 4.61
490 491 0.744281 AAAACCTTCTGCCAACCGTG 59.256 50.000 0.00 0.00 0.00 4.94
491 492 1.407618 GAAAAACCTTCTGCCAACCGT 59.592 47.619 0.00 0.00 0.00 4.83
492 493 1.269569 GGAAAAACCTTCTGCCAACCG 60.270 52.381 0.00 0.00 35.41 4.44
493 494 2.526304 GGAAAAACCTTCTGCCAACC 57.474 50.000 0.00 0.00 35.41 3.77
554 556 5.777223 TGATGATCTATAAGTCACCCTCAGG 59.223 44.000 0.00 0.00 40.04 3.86
565 567 6.762333 TGTGTGACCCATGATGATCTATAAG 58.238 40.000 0.00 0.00 0.00 1.73
576 578 6.662865 AAACAATAAATGTGTGACCCATGA 57.337 33.333 0.00 0.00 42.99 3.07
682 684 2.706890 GATTAACACTTTGGCCCGAGA 58.293 47.619 0.00 0.00 0.00 4.04
752 754 3.275143 TCAGGAGTGTTTCTCGCAAAAA 58.725 40.909 0.00 0.00 43.60 1.94
753 755 2.912771 TCAGGAGTGTTTCTCGCAAAA 58.087 42.857 0.00 0.00 43.60 2.44
754 756 2.613026 TCAGGAGTGTTTCTCGCAAA 57.387 45.000 0.00 0.00 43.60 3.68
755 757 2.839486 ATCAGGAGTGTTTCTCGCAA 57.161 45.000 0.00 0.00 43.60 4.85
756 758 2.037121 TGAATCAGGAGTGTTTCTCGCA 59.963 45.455 0.00 0.00 43.60 5.10
757 759 2.688507 TGAATCAGGAGTGTTTCTCGC 58.311 47.619 0.00 0.00 43.60 5.03
758 760 4.931601 TCAATGAATCAGGAGTGTTTCTCG 59.068 41.667 0.00 0.00 43.60 4.04
759 761 6.091986 GTCTCAATGAATCAGGAGTGTTTCTC 59.908 42.308 12.44 0.00 42.07 2.87
760 762 5.936956 GTCTCAATGAATCAGGAGTGTTTCT 59.063 40.000 12.44 0.00 34.63 2.52
761 763 5.702670 TGTCTCAATGAATCAGGAGTGTTTC 59.297 40.000 12.44 0.00 34.27 2.78
762 764 5.624159 TGTCTCAATGAATCAGGAGTGTTT 58.376 37.500 12.44 0.00 0.00 2.83
777 779 3.623703 TGCTGGCATAACATGTCTCAAT 58.376 40.909 0.00 0.00 35.48 2.57
786 788 0.250510 TCGGTGTTGCTGGCATAACA 60.251 50.000 11.87 11.87 34.66 2.41
794 796 2.945008 ACATGGATATTCGGTGTTGCTG 59.055 45.455 0.00 0.00 0.00 4.41
803 805 3.909776 ATGCTTGCACATGGATATTCG 57.090 42.857 0.00 0.00 0.00 3.34
926 929 2.877168 GCACATGCCAACAAATTTTCCA 59.123 40.909 0.00 0.00 34.31 3.53
933 936 1.069427 GCCTGCACATGCCAACAAA 59.931 52.632 0.49 0.00 41.18 2.83
1026 1029 6.880484 TGGTGAAGTAAGACTCTTACAAACA 58.120 36.000 24.62 17.23 0.00 2.83
1051 1054 5.012768 AGCTACTCCAAAAGTACTTAGCCAA 59.987 40.000 16.82 0.65 36.79 4.52
1194 1198 2.351276 GTGATGAACCGCCACCCT 59.649 61.111 0.00 0.00 0.00 4.34
1262 1266 4.510711 CAGTAGCCTGCATGAAATCAGTAG 59.489 45.833 0.00 0.00 0.00 2.57
1269 1273 2.676750 CGGTACAGTAGCCTGCATGAAA 60.677 50.000 0.00 0.00 42.81 2.69
1450 1454 0.161024 GACACACGCTAAACAGTCGC 59.839 55.000 0.00 0.00 0.00 5.19
1459 1463 3.192633 TCAATAAGCTCTGACACACGCTA 59.807 43.478 0.00 0.00 31.48 4.26
1560 1564 1.414158 CTCCTCCTTGCCGAATAGGA 58.586 55.000 0.00 0.00 45.00 2.94
1667 1671 2.835156 GTCCCTTCCTCTAGAGCAACTT 59.165 50.000 14.73 0.00 0.00 2.66
1763 1767 1.143073 GAACCCTCCACCAGAACACTT 59.857 52.381 0.00 0.00 0.00 3.16
1801 1805 8.969260 TGTCGATAGTTAAGAGTTACCTCATA 57.031 34.615 0.00 0.00 37.53 2.15
1809 1813 8.414003 TCTGCAATATGTCGATAGTTAAGAGTT 58.586 33.333 0.00 0.00 37.40 3.01
1967 1971 4.899239 CCCGCGCCCATGAGTCTC 62.899 72.222 0.00 0.00 0.00 3.36
2013 2017 4.814294 ATCTTGGCGCGGTCGTCC 62.814 66.667 8.83 0.00 40.09 4.79
2108 2112 1.500474 CTCCTTGGTAGCCCTGATCA 58.500 55.000 0.00 0.00 0.00 2.92
2172 2176 1.420138 GGTCTCCAACTGAAACCAGGA 59.580 52.381 0.00 0.00 36.01 3.86
2263 2268 1.152440 AGGATCTAGCCACCCCTCG 60.152 63.158 0.00 0.00 0.00 4.63
2375 2380 1.134965 AGAATCCTCGAAGTGAAGCGG 60.135 52.381 0.00 0.00 0.00 5.52
2414 2419 3.698040 GTGACCATCTCCAAGCAATCAAT 59.302 43.478 0.00 0.00 0.00 2.57
2415 2420 3.084039 GTGACCATCTCCAAGCAATCAA 58.916 45.455 0.00 0.00 0.00 2.57
2434 2439 0.798771 GGCGAGTGTTCTAGAGCGTG 60.799 60.000 1.89 0.00 0.00 5.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.