Multiple sequence alignment - TraesCS3B01G551700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G551700 chr3B 100.000 3070 0 0 1 3070 786599871 786602940 0.000000e+00 5670.0
1 TraesCS3B01G551700 chr3B 91.221 262 23 0 2207 2468 420410902 420410641 1.050000e-94 357.0
2 TraesCS3B01G551700 chr3B 90.840 262 24 0 2207 2468 96426414 96426153 4.870000e-93 351.0
3 TraesCS3B01G551700 chr3B 82.805 221 28 10 2854 3070 44789293 44789079 4.040000e-44 189.0
4 TraesCS3B01G551700 chr3B 81.690 213 30 8 2854 3064 44757998 44758203 5.260000e-38 169.0
5 TraesCS3B01G551700 chr3D 90.223 1524 64 23 645 2107 588198412 588199911 0.000000e+00 1910.0
6 TraesCS3B01G551700 chr3D 89.655 551 33 7 2514 3061 588200033 588200562 0.000000e+00 680.0
7 TraesCS3B01G551700 chr3D 83.173 208 26 8 2855 3060 26588557 26588357 6.760000e-42 182.0
8 TraesCS3B01G551700 chr3D 81.193 218 30 9 2858 3070 542224271 542224482 6.810000e-37 165.0
9 TraesCS3B01G551700 chr3A 91.344 1421 60 22 717 2107 718086744 718088131 0.000000e+00 1884.0
10 TraesCS3B01G551700 chr3A 89.693 553 31 13 2514 3063 718088263 718088792 0.000000e+00 682.0
11 TraesCS3B01G551700 chr3A 83.028 218 22 11 2855 3064 36667660 36667450 1.880000e-42 183.0
12 TraesCS3B01G551700 chr3A 81.279 219 28 11 2858 3070 678382989 678383200 6.810000e-37 165.0
13 TraesCS3B01G551700 chr3A 82.857 105 3 9 629 718 718086607 718086711 2.540000e-11 80.5
14 TraesCS3B01G551700 chr1B 91.635 263 22 0 2207 2469 14629347 14629085 6.260000e-97 364.0
15 TraesCS3B01G551700 chr6B 91.221 262 23 0 2208 2469 375596435 375596696 1.050000e-94 357.0
16 TraesCS3B01G551700 chr6B 90.566 265 25 0 2205 2469 20704692 20704956 4.870000e-93 351.0
17 TraesCS3B01G551700 chr4B 91.221 262 22 1 2208 2469 659152895 659152635 3.770000e-94 355.0
18 TraesCS3B01G551700 chr7B 90.074 272 25 2 2207 2477 653231385 653231115 4.870000e-93 351.0
19 TraesCS3B01G551700 chr7B 90.074 272 25 2 2207 2477 653236374 653236104 4.870000e-93 351.0
20 TraesCS3B01G551700 chr7B 90.074 272 25 2 2207 2477 653286122 653285852 4.870000e-93 351.0
21 TraesCS3B01G551700 chr2A 95.918 98 3 1 2974 3070 202892217 202892314 1.140000e-34 158.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G551700 chr3B 786599871 786602940 3069 False 5670.000000 5670 100.000000 1 3070 1 chr3B.!!$F2 3069
1 TraesCS3B01G551700 chr3D 588198412 588200562 2150 False 1295.000000 1910 89.939000 645 3061 2 chr3D.!!$F2 2416
2 TraesCS3B01G551700 chr3A 718086607 718088792 2185 False 882.166667 1884 87.964667 629 3063 3 chr3A.!!$F2 2434

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
139 140 0.039074 CGAGTTGTGCGGTTCTCTCT 60.039 55.0 0.0 0.0 0.00 3.10 F
221 222 0.039617 CCGCATTTTTGAGGCAACGA 60.040 50.0 0.0 0.0 46.39 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2068 2178 1.002134 CGGAACCACCTGCCATCTT 60.002 57.895 0.0 0.0 36.31 2.4 R
2069 2179 1.488705 TTCGGAACCACCTGCCATCT 61.489 55.000 0.0 0.0 36.31 2.9 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.111265 ATGCTTCCCCTTGGAGTCT 57.889 52.632 0.00 0.00 43.07 3.24
19 20 0.915364 ATGCTTCCCCTTGGAGTCTC 59.085 55.000 0.00 0.00 43.07 3.36
20 21 1.219393 GCTTCCCCTTGGAGTCTCG 59.781 63.158 0.00 0.00 43.07 4.04
21 22 1.901085 CTTCCCCTTGGAGTCTCGG 59.099 63.158 0.00 0.00 43.07 4.63
22 23 2.245438 CTTCCCCTTGGAGTCTCGGC 62.245 65.000 0.00 0.00 43.07 5.54
23 24 4.148825 CCCCTTGGAGTCTCGGCG 62.149 72.222 0.00 0.00 0.00 6.46
24 25 4.148825 CCCTTGGAGTCTCGGCGG 62.149 72.222 7.21 0.00 0.00 6.13
25 26 4.821589 CCTTGGAGTCTCGGCGGC 62.822 72.222 7.21 0.00 0.00 6.53
44 45 2.050714 ACGCGTCATCGTCGTTGT 60.051 55.556 5.58 0.00 42.92 3.32
45 46 1.659335 ACGCGTCATCGTCGTTGTT 60.659 52.632 5.58 0.00 42.92 2.83
46 47 1.225104 CGCGTCATCGTCGTTGTTG 60.225 57.895 0.00 0.00 39.49 3.33
47 48 1.850640 GCGTCATCGTCGTTGTTGT 59.149 52.632 3.38 0.00 39.49 3.32
48 49 0.179282 GCGTCATCGTCGTTGTTGTC 60.179 55.000 3.38 0.00 39.49 3.18
49 50 0.433492 CGTCATCGTCGTTGTTGTCC 59.567 55.000 3.38 0.00 0.00 4.02
50 51 0.433492 GTCATCGTCGTTGTTGTCCG 59.567 55.000 3.38 0.00 0.00 4.79
51 52 0.311477 TCATCGTCGTTGTTGTCCGA 59.689 50.000 3.38 0.00 0.00 4.55
56 57 2.966324 TCGTTGTTGTCCGACACAG 58.034 52.632 0.00 0.00 35.97 3.66
57 58 0.456628 TCGTTGTTGTCCGACACAGA 59.543 50.000 0.00 0.00 35.97 3.41
58 59 0.852777 CGTTGTTGTCCGACACAGAG 59.147 55.000 0.00 0.00 35.97 3.35
59 60 1.217882 GTTGTTGTCCGACACAGAGG 58.782 55.000 0.00 0.00 35.97 3.69
60 61 1.116308 TTGTTGTCCGACACAGAGGA 58.884 50.000 0.00 0.00 35.97 3.71
61 62 1.338107 TGTTGTCCGACACAGAGGAT 58.662 50.000 0.00 0.00 38.97 3.24
62 63 1.000843 TGTTGTCCGACACAGAGGATG 59.999 52.381 0.00 0.00 38.97 3.51
63 64 1.272490 GTTGTCCGACACAGAGGATGA 59.728 52.381 0.00 0.00 38.97 2.92
64 65 0.888619 TGTCCGACACAGAGGATGAC 59.111 55.000 0.00 0.00 38.97 3.06
65 66 0.179161 GTCCGACACAGAGGATGACG 60.179 60.000 0.00 0.00 38.97 4.35
66 67 0.322187 TCCGACACAGAGGATGACGA 60.322 55.000 0.00 0.00 0.00 4.20
67 68 0.179161 CCGACACAGAGGATGACGAC 60.179 60.000 0.00 0.00 0.00 4.34
68 69 0.521450 CGACACAGAGGATGACGACG 60.521 60.000 0.00 0.00 0.00 5.12
69 70 0.803117 GACACAGAGGATGACGACGA 59.197 55.000 0.00 0.00 0.00 4.20
70 71 0.522180 ACACAGAGGATGACGACGAC 59.478 55.000 0.00 0.00 0.00 4.34
71 72 0.521450 CACAGAGGATGACGACGACG 60.521 60.000 5.58 5.58 45.75 5.12
72 73 0.672711 ACAGAGGATGACGACGACGA 60.673 55.000 15.32 0.00 42.66 4.20
73 74 0.446616 CAGAGGATGACGACGACGAA 59.553 55.000 15.32 1.93 42.66 3.85
74 75 1.135774 CAGAGGATGACGACGACGAAA 60.136 52.381 15.32 1.54 42.66 3.46
75 76 1.743958 AGAGGATGACGACGACGAAAT 59.256 47.619 15.32 6.73 42.66 2.17
76 77 1.846782 GAGGATGACGACGACGAAATG 59.153 52.381 15.32 0.00 42.66 2.32
77 78 1.471287 AGGATGACGACGACGAAATGA 59.529 47.619 15.32 0.00 42.66 2.57
78 79 2.099263 AGGATGACGACGACGAAATGAT 59.901 45.455 15.32 0.00 42.66 2.45
79 80 2.216488 GGATGACGACGACGAAATGATG 59.784 50.000 15.32 0.00 42.66 3.07
80 81 2.622546 TGACGACGACGAAATGATGA 57.377 45.000 15.32 0.00 42.66 2.92
81 82 3.145212 TGACGACGACGAAATGATGAT 57.855 42.857 15.32 0.00 42.66 2.45
82 83 2.851824 TGACGACGACGAAATGATGATG 59.148 45.455 15.32 0.00 42.66 3.07
83 84 2.852413 GACGACGACGAAATGATGATGT 59.148 45.455 15.32 0.00 42.66 3.06
84 85 2.852413 ACGACGACGAAATGATGATGTC 59.148 45.455 15.32 0.00 42.66 3.06
85 86 2.851824 CGACGACGAAATGATGATGTCA 59.148 45.455 0.00 0.00 42.66 3.58
86 87 3.061601 CGACGACGAAATGATGATGTCAG 60.062 47.826 0.00 0.00 40.20 3.51
87 88 3.849911 ACGACGAAATGATGATGTCAGT 58.150 40.909 0.00 0.00 40.92 3.41
88 89 3.859961 ACGACGAAATGATGATGTCAGTC 59.140 43.478 0.00 0.00 40.92 3.51
89 90 3.859386 CGACGAAATGATGATGTCAGTCA 59.141 43.478 0.00 0.00 40.92 3.41
90 91 4.259570 CGACGAAATGATGATGTCAGTCAC 60.260 45.833 0.00 0.00 40.92 3.67
91 92 3.614176 ACGAAATGATGATGTCAGTCACG 59.386 43.478 0.00 0.00 40.92 4.35
92 93 3.542875 CGAAATGATGATGTCAGTCACGC 60.543 47.826 0.00 0.00 40.92 5.34
93 94 1.564207 ATGATGATGTCAGTCACGCG 58.436 50.000 3.53 3.53 40.92 6.01
94 95 0.243636 TGATGATGTCAGTCACGCGT 59.756 50.000 5.58 5.58 31.80 6.01
95 96 0.917259 GATGATGTCAGTCACGCGTC 59.083 55.000 9.86 0.00 0.00 5.19
96 97 0.798389 ATGATGTCAGTCACGCGTCG 60.798 55.000 9.86 5.44 0.00 5.12
97 98 2.126463 ATGTCAGTCACGCGTCGG 60.126 61.111 9.86 0.00 0.00 4.79
98 99 3.626680 ATGTCAGTCACGCGTCGGG 62.627 63.158 9.86 7.88 0.00 5.14
114 115 4.090057 GGCGCCGTGTTTCTGCTC 62.090 66.667 12.58 0.00 0.00 4.26
115 116 4.090057 GCGCCGTGTTTCTGCTCC 62.090 66.667 0.00 0.00 0.00 4.70
116 117 2.664851 CGCCGTGTTTCTGCTCCA 60.665 61.111 0.00 0.00 0.00 3.86
117 118 2.034879 CGCCGTGTTTCTGCTCCAT 61.035 57.895 0.00 0.00 0.00 3.41
118 119 1.796796 GCCGTGTTTCTGCTCCATC 59.203 57.895 0.00 0.00 0.00 3.51
119 120 0.955428 GCCGTGTTTCTGCTCCATCA 60.955 55.000 0.00 0.00 0.00 3.07
120 121 0.798776 CCGTGTTTCTGCTCCATCAC 59.201 55.000 0.00 0.00 0.00 3.06
121 122 0.439985 CGTGTTTCTGCTCCATCACG 59.560 55.000 0.00 0.00 41.40 4.35
122 123 1.795768 GTGTTTCTGCTCCATCACGA 58.204 50.000 0.00 0.00 0.00 4.35
123 124 1.728971 GTGTTTCTGCTCCATCACGAG 59.271 52.381 0.00 0.00 0.00 4.18
124 125 1.344438 TGTTTCTGCTCCATCACGAGT 59.656 47.619 0.00 0.00 32.11 4.18
125 126 2.224281 TGTTTCTGCTCCATCACGAGTT 60.224 45.455 0.00 0.00 32.11 3.01
126 127 2.084610 TTCTGCTCCATCACGAGTTG 57.915 50.000 0.00 0.00 32.11 3.16
127 128 0.969149 TCTGCTCCATCACGAGTTGT 59.031 50.000 0.00 0.00 32.11 3.32
135 136 4.027755 CACGAGTTGTGCGGTTCT 57.972 55.556 0.00 0.00 42.70 3.01
136 137 1.853319 CACGAGTTGTGCGGTTCTC 59.147 57.895 0.00 0.00 42.70 2.87
137 138 0.597637 CACGAGTTGTGCGGTTCTCT 60.598 55.000 0.00 0.00 42.70 3.10
138 139 0.318784 ACGAGTTGTGCGGTTCTCTC 60.319 55.000 0.00 0.00 0.00 3.20
139 140 0.039074 CGAGTTGTGCGGTTCTCTCT 60.039 55.000 0.00 0.00 0.00 3.10
140 141 1.704070 GAGTTGTGCGGTTCTCTCTC 58.296 55.000 0.00 0.00 0.00 3.20
141 142 1.000163 GAGTTGTGCGGTTCTCTCTCA 60.000 52.381 0.00 0.00 0.00 3.27
142 143 1.000283 AGTTGTGCGGTTCTCTCTCAG 60.000 52.381 0.00 0.00 0.00 3.35
143 144 0.318441 TTGTGCGGTTCTCTCTCAGG 59.682 55.000 0.00 0.00 0.00 3.86
144 145 0.539669 TGTGCGGTTCTCTCTCAGGA 60.540 55.000 0.00 0.00 0.00 3.86
145 146 0.109039 GTGCGGTTCTCTCTCAGGAC 60.109 60.000 0.00 0.00 0.00 3.85
146 147 1.137825 GCGGTTCTCTCTCAGGACG 59.862 63.158 0.00 0.00 29.75 4.79
147 148 1.137825 CGGTTCTCTCTCAGGACGC 59.862 63.158 0.00 0.00 29.75 5.19
148 149 1.309499 CGGTTCTCTCTCAGGACGCT 61.309 60.000 0.00 0.00 29.75 5.07
149 150 0.172352 GGTTCTCTCTCAGGACGCTG 59.828 60.000 0.00 0.00 29.75 5.18
150 151 0.457681 GTTCTCTCTCAGGACGCTGC 60.458 60.000 0.00 0.00 0.00 5.25
151 152 1.599606 TTCTCTCTCAGGACGCTGCC 61.600 60.000 0.00 0.00 0.00 4.85
152 153 2.283173 TCTCTCAGGACGCTGCCA 60.283 61.111 0.00 0.00 0.00 4.92
153 154 1.674764 CTCTCTCAGGACGCTGCCAT 61.675 60.000 0.00 0.00 0.00 4.40
154 155 1.227205 CTCTCAGGACGCTGCCATC 60.227 63.158 0.00 0.00 0.00 3.51
155 156 1.674764 CTCTCAGGACGCTGCCATCT 61.675 60.000 0.00 0.00 0.00 2.90
156 157 1.521010 CTCAGGACGCTGCCATCTG 60.521 63.158 0.00 0.00 0.00 2.90
157 158 3.200593 CAGGACGCTGCCATCTGC 61.201 66.667 0.00 0.00 41.77 4.26
167 168 4.827087 CCATCTGCGACGCCAGCT 62.827 66.667 18.69 3.67 35.28 4.24
168 169 3.561213 CATCTGCGACGCCAGCTG 61.561 66.667 18.69 6.78 35.28 4.24
169 170 4.074526 ATCTGCGACGCCAGCTGT 62.075 61.111 18.69 0.00 35.48 4.40
170 171 3.596066 ATCTGCGACGCCAGCTGTT 62.596 57.895 18.69 0.00 35.48 3.16
171 172 4.081030 CTGCGACGCCAGCTGTTG 62.081 66.667 18.69 6.94 35.28 3.33
172 173 4.908687 TGCGACGCCAGCTGTTGT 62.909 61.111 18.69 10.48 35.28 3.32
173 174 4.374702 GCGACGCCAGCTGTTGTG 62.375 66.667 13.81 7.48 0.00 3.33
174 175 2.661537 CGACGCCAGCTGTTGTGA 60.662 61.111 13.81 0.00 0.00 3.58
175 176 2.939022 GACGCCAGCTGTTGTGAC 59.061 61.111 13.81 1.64 0.00 3.67
176 177 1.595382 GACGCCAGCTGTTGTGACT 60.595 57.895 13.81 0.00 0.00 3.41
177 178 1.560860 GACGCCAGCTGTTGTGACTC 61.561 60.000 13.81 0.00 0.00 3.36
178 179 2.320587 CGCCAGCTGTTGTGACTCC 61.321 63.158 13.81 0.00 0.00 3.85
179 180 1.072159 GCCAGCTGTTGTGACTCCT 59.928 57.895 13.81 0.00 0.00 3.69
180 181 0.952984 GCCAGCTGTTGTGACTCCTC 60.953 60.000 13.81 0.00 0.00 3.71
181 182 0.321122 CCAGCTGTTGTGACTCCTCC 60.321 60.000 13.81 0.00 0.00 4.30
182 183 0.394192 CAGCTGTTGTGACTCCTCCA 59.606 55.000 5.25 0.00 0.00 3.86
183 184 0.683973 AGCTGTTGTGACTCCTCCAG 59.316 55.000 0.00 0.00 0.00 3.86
184 185 0.952984 GCTGTTGTGACTCCTCCAGC 60.953 60.000 0.00 0.00 38.58 4.85
185 186 0.321122 CTGTTGTGACTCCTCCAGCC 60.321 60.000 0.00 0.00 0.00 4.85
186 187 1.003233 GTTGTGACTCCTCCAGCCC 60.003 63.158 0.00 0.00 0.00 5.19
187 188 2.224159 TTGTGACTCCTCCAGCCCC 61.224 63.158 0.00 0.00 0.00 5.80
188 189 2.607750 GTGACTCCTCCAGCCCCA 60.608 66.667 0.00 0.00 0.00 4.96
189 190 1.997874 GTGACTCCTCCAGCCCCAT 60.998 63.158 0.00 0.00 0.00 4.00
190 191 1.997311 TGACTCCTCCAGCCCCATG 60.997 63.158 0.00 0.00 0.00 3.66
191 192 3.412624 GACTCCTCCAGCCCCATGC 62.413 68.421 0.00 0.00 41.71 4.06
200 201 2.045926 GCCCCATGCGTGAGAGTT 60.046 61.111 7.72 0.00 0.00 3.01
201 202 2.401766 GCCCCATGCGTGAGAGTTG 61.402 63.158 7.72 0.00 0.00 3.16
202 203 2.401766 CCCCATGCGTGAGAGTTGC 61.402 63.158 7.72 0.00 0.00 4.17
203 204 2.401766 CCCATGCGTGAGAGTTGCC 61.402 63.158 7.72 0.00 0.00 4.52
204 205 2.743752 CCATGCGTGAGAGTTGCCG 61.744 63.158 7.72 0.00 0.00 5.69
205 206 3.121030 ATGCGTGAGAGTTGCCGC 61.121 61.111 0.00 0.00 45.92 6.53
207 208 3.121030 GCGTGAGAGTTGCCGCAT 61.121 61.111 0.00 0.00 45.12 4.73
208 209 2.680913 GCGTGAGAGTTGCCGCATT 61.681 57.895 0.00 0.00 45.12 3.56
209 210 1.868997 CGTGAGAGTTGCCGCATTT 59.131 52.632 0.00 0.00 0.00 2.32
210 211 0.238289 CGTGAGAGTTGCCGCATTTT 59.762 50.000 0.00 0.00 0.00 1.82
211 212 1.334960 CGTGAGAGTTGCCGCATTTTT 60.335 47.619 0.00 0.00 0.00 1.94
212 213 2.053627 GTGAGAGTTGCCGCATTTTTG 58.946 47.619 0.00 0.00 0.00 2.44
213 214 1.952990 TGAGAGTTGCCGCATTTTTGA 59.047 42.857 0.00 0.00 0.00 2.69
214 215 2.030893 TGAGAGTTGCCGCATTTTTGAG 60.031 45.455 0.00 0.00 0.00 3.02
215 216 1.270550 AGAGTTGCCGCATTTTTGAGG 59.729 47.619 0.00 0.00 0.00 3.86
220 221 2.433637 CCGCATTTTTGAGGCAACG 58.566 52.632 0.00 0.00 46.39 4.10
221 222 0.039617 CCGCATTTTTGAGGCAACGA 60.040 50.000 0.00 0.00 46.39 3.85
222 223 1.052287 CGCATTTTTGAGGCAACGAC 58.948 50.000 0.00 0.00 46.39 4.34
223 224 1.599171 CGCATTTTTGAGGCAACGACA 60.599 47.619 0.00 0.00 46.39 4.35
224 225 2.468831 GCATTTTTGAGGCAACGACAA 58.531 42.857 0.00 0.00 46.39 3.18
225 226 2.218530 GCATTTTTGAGGCAACGACAAC 59.781 45.455 0.00 0.00 46.39 3.32
226 227 3.443037 CATTTTTGAGGCAACGACAACA 58.557 40.909 0.00 0.00 46.39 3.33
227 228 2.842208 TTTTGAGGCAACGACAACAG 57.158 45.000 0.00 0.00 46.39 3.16
228 229 1.021202 TTTGAGGCAACGACAACAGG 58.979 50.000 0.00 0.00 46.39 4.00
229 230 1.444119 TTGAGGCAACGACAACAGGC 61.444 55.000 0.00 0.00 46.39 4.85
230 231 1.891919 GAGGCAACGACAACAGGCA 60.892 57.895 0.00 0.00 46.39 4.75
231 232 1.228245 AGGCAACGACAACAGGCAT 60.228 52.632 0.00 0.00 46.39 4.40
232 233 1.210155 GGCAACGACAACAGGCATC 59.790 57.895 0.00 0.00 0.00 3.91
233 234 1.237285 GGCAACGACAACAGGCATCT 61.237 55.000 0.00 0.00 0.00 2.90
234 235 0.166814 GCAACGACAACAGGCATCTC 59.833 55.000 0.00 0.00 0.00 2.75
235 236 0.798776 CAACGACAACAGGCATCTCC 59.201 55.000 0.00 0.00 0.00 3.71
236 237 0.396435 AACGACAACAGGCATCTCCA 59.604 50.000 0.00 0.00 37.29 3.86
237 238 0.320771 ACGACAACAGGCATCTCCAC 60.321 55.000 0.00 0.00 37.29 4.02
238 239 1.354337 CGACAACAGGCATCTCCACG 61.354 60.000 0.00 0.00 37.29 4.94
239 240 1.003355 ACAACAGGCATCTCCACGG 60.003 57.895 0.00 0.00 37.29 4.94
240 241 1.296392 CAACAGGCATCTCCACGGA 59.704 57.895 0.00 0.00 37.29 4.69
241 242 0.107508 CAACAGGCATCTCCACGGAT 60.108 55.000 0.00 0.00 37.29 4.18
242 243 0.107508 AACAGGCATCTCCACGGATG 60.108 55.000 0.00 0.00 44.08 3.51
243 244 1.267574 ACAGGCATCTCCACGGATGT 61.268 55.000 6.38 0.00 43.41 3.06
244 245 0.812811 CAGGCATCTCCACGGATGTG 60.813 60.000 6.38 0.00 43.41 3.21
245 246 1.221840 GGCATCTCCACGGATGTGT 59.778 57.895 6.38 0.00 44.92 3.72
246 247 0.464036 GGCATCTCCACGGATGTGTA 59.536 55.000 6.38 0.00 44.92 2.90
247 248 1.539065 GGCATCTCCACGGATGTGTAG 60.539 57.143 6.38 0.00 44.92 2.74
248 249 1.539065 GCATCTCCACGGATGTGTAGG 60.539 57.143 6.38 0.00 44.92 3.18
249 250 2.031870 CATCTCCACGGATGTGTAGGA 58.968 52.381 0.00 0.00 44.92 2.94
250 251 1.763968 TCTCCACGGATGTGTAGGAG 58.236 55.000 0.00 0.00 44.92 3.69
251 252 0.103208 CTCCACGGATGTGTAGGAGC 59.897 60.000 0.00 0.00 44.92 4.70
252 253 1.226974 CCACGGATGTGTAGGAGCG 60.227 63.158 0.00 0.00 44.92 5.03
253 254 1.226974 CACGGATGTGTAGGAGCGG 60.227 63.158 0.00 0.00 41.34 5.52
254 255 2.279517 CGGATGTGTAGGAGCGGC 60.280 66.667 0.00 0.00 0.00 6.53
255 256 2.279517 GGATGTGTAGGAGCGGCG 60.280 66.667 0.51 0.51 0.00 6.46
256 257 2.782222 GGATGTGTAGGAGCGGCGA 61.782 63.158 12.98 0.00 0.00 5.54
257 258 1.141019 GATGTGTAGGAGCGGCGAA 59.859 57.895 12.98 0.00 0.00 4.70
258 259 0.249489 GATGTGTAGGAGCGGCGAAT 60.249 55.000 12.98 0.00 0.00 3.34
259 260 0.530650 ATGTGTAGGAGCGGCGAATG 60.531 55.000 12.98 0.00 0.00 2.67
260 261 1.883084 GTGTAGGAGCGGCGAATGG 60.883 63.158 12.98 0.00 0.00 3.16
261 262 2.967615 GTAGGAGCGGCGAATGGC 60.968 66.667 12.98 0.00 42.51 4.40
279 280 4.516195 GTCGCGGAGGGCCTCTTC 62.516 72.222 31.39 21.35 41.64 2.87
282 283 4.516195 GCGGAGGGCCTCTTCGTC 62.516 72.222 31.39 18.62 45.99 4.20
283 284 4.194720 CGGAGGGCCTCTTCGTCG 62.195 72.222 31.39 21.96 39.58 5.12
284 285 4.516195 GGAGGGCCTCTTCGTCGC 62.516 72.222 31.39 10.61 0.00 5.19
285 286 4.856607 GAGGGCCTCTTCGTCGCG 62.857 72.222 26.44 0.00 0.00 5.87
289 290 4.856607 GCCTCTTCGTCGCGGGAG 62.857 72.222 6.13 6.62 0.00 4.30
290 291 4.194720 CCTCTTCGTCGCGGGAGG 62.195 72.222 15.26 15.26 39.27 4.30
291 292 4.194720 CTCTTCGTCGCGGGAGGG 62.195 72.222 20.15 8.08 45.26 4.30
329 330 2.189594 TCTGCAAGATCCACACTTGG 57.810 50.000 0.00 0.00 38.67 3.61
330 331 0.524862 CTGCAAGATCCACACTTGGC 59.475 55.000 0.00 0.00 43.12 4.52
331 332 1.236616 TGCAAGATCCACACTTGGCG 61.237 55.000 0.00 0.00 43.56 5.69
332 333 1.503542 CAAGATCCACACTTGGCGC 59.496 57.895 0.00 0.00 43.56 6.53
333 334 1.675641 AAGATCCACACTTGGCGCC 60.676 57.895 22.73 22.73 43.56 6.53
334 335 3.134127 GATCCACACTTGGCGCCC 61.134 66.667 26.77 6.44 43.56 6.13
335 336 3.918253 GATCCACACTTGGCGCCCA 62.918 63.158 26.77 13.22 43.56 5.36
336 337 3.505790 ATCCACACTTGGCGCCCAA 62.506 57.895 26.77 17.05 43.56 4.12
337 338 3.977244 CCACACTTGGCGCCCAAC 61.977 66.667 26.77 0.00 38.75 3.77
338 339 2.906897 CACACTTGGCGCCCAACT 60.907 61.111 26.77 4.53 38.75 3.16
339 340 2.594592 ACACTTGGCGCCCAACTC 60.595 61.111 26.77 0.00 38.75 3.01
340 341 2.594303 CACTTGGCGCCCAACTCA 60.594 61.111 26.77 0.00 38.75 3.41
341 342 2.281761 ACTTGGCGCCCAACTCAG 60.282 61.111 26.77 12.29 38.75 3.35
342 343 3.741476 CTTGGCGCCCAACTCAGC 61.741 66.667 26.77 0.00 38.75 4.26
348 349 4.944249 GCCCAACTCAGCGAAAAC 57.056 55.556 0.00 0.00 0.00 2.43
349 350 1.285950 GCCCAACTCAGCGAAAACC 59.714 57.895 0.00 0.00 0.00 3.27
350 351 1.452145 GCCCAACTCAGCGAAAACCA 61.452 55.000 0.00 0.00 0.00 3.67
351 352 1.247567 CCCAACTCAGCGAAAACCAT 58.752 50.000 0.00 0.00 0.00 3.55
352 353 1.200020 CCCAACTCAGCGAAAACCATC 59.800 52.381 0.00 0.00 0.00 3.51
353 354 1.135972 CCAACTCAGCGAAAACCATCG 60.136 52.381 0.00 0.00 45.41 3.84
354 355 1.798223 CAACTCAGCGAAAACCATCGA 59.202 47.619 0.24 0.00 45.48 3.59
355 356 2.386661 ACTCAGCGAAAACCATCGAT 57.613 45.000 0.00 0.00 45.48 3.59
356 357 2.699954 ACTCAGCGAAAACCATCGATT 58.300 42.857 0.00 0.00 45.48 3.34
357 358 2.416547 ACTCAGCGAAAACCATCGATTG 59.583 45.455 0.00 0.00 45.48 2.67
370 371 7.576856 AAAACCATCGATTGGATGTAGGTTTTC 60.577 37.037 22.45 0.00 45.95 2.29
372 373 6.435430 CATCGATTGGATGTAGGTTTTCAA 57.565 37.500 0.00 0.00 46.14 2.69
373 374 7.031226 CATCGATTGGATGTAGGTTTTCAAT 57.969 36.000 0.00 0.00 46.14 2.57
374 375 8.153479 CATCGATTGGATGTAGGTTTTCAATA 57.847 34.615 0.00 0.00 46.14 1.90
375 376 8.786898 CATCGATTGGATGTAGGTTTTCAATAT 58.213 33.333 0.00 0.00 46.14 1.28
376 377 8.378172 TCGATTGGATGTAGGTTTTCAATATC 57.622 34.615 0.00 0.00 0.00 1.63
377 378 7.170828 TCGATTGGATGTAGGTTTTCAATATCG 59.829 37.037 0.00 0.00 0.00 2.92
378 379 6.935741 TTGGATGTAGGTTTTCAATATCGG 57.064 37.500 0.00 0.00 0.00 4.18
379 380 6.241882 TGGATGTAGGTTTTCAATATCGGA 57.758 37.500 0.00 0.00 0.00 4.55
380 381 6.654959 TGGATGTAGGTTTTCAATATCGGAA 58.345 36.000 0.00 0.00 0.00 4.30
381 382 7.113437 TGGATGTAGGTTTTCAATATCGGAAA 58.887 34.615 0.00 0.00 32.74 3.13
382 383 7.066525 TGGATGTAGGTTTTCAATATCGGAAAC 59.933 37.037 2.87 0.00 34.23 2.78
383 384 7.066525 GGATGTAGGTTTTCAATATCGGAAACA 59.933 37.037 0.08 0.00 34.23 2.83
384 385 7.747155 TGTAGGTTTTCAATATCGGAAACAA 57.253 32.000 0.08 0.00 34.23 2.83
385 386 8.167605 TGTAGGTTTTCAATATCGGAAACAAA 57.832 30.769 0.08 0.00 34.23 2.83
386 387 8.630917 TGTAGGTTTTCAATATCGGAAACAAAA 58.369 29.630 0.08 0.00 34.23 2.44
387 388 9.465985 GTAGGTTTTCAATATCGGAAACAAAAA 57.534 29.630 0.08 0.00 34.23 1.94
411 412 8.477984 AAAATTTGGAACATCGAAATATGTGG 57.522 30.769 0.00 0.00 39.98 4.17
412 413 7.403312 AATTTGGAACATCGAAATATGTGGA 57.597 32.000 0.00 0.00 39.98 4.02
413 414 6.825944 TTTGGAACATCGAAATATGTGGAA 57.174 33.333 0.00 0.00 39.98 3.53
414 415 6.825944 TTGGAACATCGAAATATGTGGAAA 57.174 33.333 0.00 0.00 39.98 3.13
415 416 7.403312 TTGGAACATCGAAATATGTGGAAAT 57.597 32.000 0.00 0.00 39.98 2.17
416 417 7.403312 TGGAACATCGAAATATGTGGAAATT 57.597 32.000 0.00 0.00 39.98 1.82
417 418 7.479980 TGGAACATCGAAATATGTGGAAATTC 58.520 34.615 0.00 0.00 39.98 2.17
418 419 7.339212 TGGAACATCGAAATATGTGGAAATTCT 59.661 33.333 0.00 0.00 39.98 2.40
419 420 7.645340 GGAACATCGAAATATGTGGAAATTCTG 59.355 37.037 0.00 0.00 39.98 3.02
420 421 7.864108 ACATCGAAATATGTGGAAATTCTGA 57.136 32.000 0.00 0.00 38.65 3.27
421 422 8.279970 ACATCGAAATATGTGGAAATTCTGAA 57.720 30.769 0.00 0.00 38.65 3.02
422 423 8.739039 ACATCGAAATATGTGGAAATTCTGAAA 58.261 29.630 0.00 0.00 38.65 2.69
423 424 9.740239 CATCGAAATATGTGGAAATTCTGAAAT 57.260 29.630 0.00 0.00 0.00 2.17
437 438 7.684062 AATTCTGAAATTTCGCATATTTCGG 57.316 32.000 13.34 13.71 44.29 4.30
439 440 6.429791 TCTGAAATTTCGCATATTTCGGAA 57.570 33.333 17.56 0.00 46.51 4.30
440 441 6.847400 TCTGAAATTTCGCATATTTCGGAAA 58.153 32.000 17.56 5.52 46.51 3.13
441 442 7.479980 TCTGAAATTTCGCATATTTCGGAAAT 58.520 30.769 18.97 18.97 46.51 2.17
442 443 7.973388 TCTGAAATTTCGCATATTTCGGAAATT 59.027 29.630 20.04 10.01 46.51 1.82
443 444 9.232082 CTGAAATTTCGCATATTTCGGAAATTA 57.768 29.630 20.04 7.89 45.11 1.40
444 445 9.743057 TGAAATTTCGCATATTTCGGAAATTAT 57.257 25.926 20.04 9.58 42.28 1.28
449 450 7.922505 TCGCATATTTCGGAAATTATTTTGG 57.077 32.000 20.04 5.54 32.38 3.28
450 451 7.708051 TCGCATATTTCGGAAATTATTTTGGA 58.292 30.769 20.04 7.44 32.38 3.53
451 452 8.356657 TCGCATATTTCGGAAATTATTTTGGAT 58.643 29.630 20.04 3.68 32.38 3.41
452 453 8.977505 CGCATATTTCGGAAATTATTTTGGATT 58.022 29.630 20.04 0.00 32.38 3.01
458 459 9.988815 TTTCGGAAATTATTTTGGATTTTGAGA 57.011 25.926 0.00 0.00 0.00 3.27
492 493 9.990360 TTTCATTTAATTTGGAGGAGTTTAACC 57.010 29.630 0.00 0.00 0.00 2.85
493 494 8.950007 TCATTTAATTTGGAGGAGTTTAACCT 57.050 30.769 0.00 0.00 40.80 3.50
498 499 7.956328 AATTTGGAGGAGTTTAACCTAATCC 57.044 36.000 0.00 0.00 37.93 3.01
499 500 6.457159 TTTGGAGGAGTTTAACCTAATCCA 57.543 37.500 2.55 2.55 37.93 3.41
500 501 6.457159 TTGGAGGAGTTTAACCTAATCCAA 57.543 37.500 11.99 11.99 36.92 3.53
501 502 6.457159 TGGAGGAGTTTAACCTAATCCAAA 57.543 37.500 3.89 0.00 37.93 3.28
502 503 7.039722 TGGAGGAGTTTAACCTAATCCAAAT 57.960 36.000 3.89 0.00 37.93 2.32
503 504 7.475299 TGGAGGAGTTTAACCTAATCCAAATT 58.525 34.615 3.89 0.00 37.93 1.82
504 505 7.953493 TGGAGGAGTTTAACCTAATCCAAATTT 59.047 33.333 3.89 0.00 37.93 1.82
505 506 9.470399 GGAGGAGTTTAACCTAATCCAAATTTA 57.530 33.333 4.35 0.00 37.93 1.40
534 535 9.748708 TTAAATTTGTTTGAATCTGTCTTGAGG 57.251 29.630 0.00 0.00 0.00 3.86
535 536 6.966534 ATTTGTTTGAATCTGTCTTGAGGT 57.033 33.333 0.00 0.00 0.00 3.85
536 537 6.773976 TTTGTTTGAATCTGTCTTGAGGTT 57.226 33.333 0.00 0.00 0.00 3.50
537 538 6.773976 TTGTTTGAATCTGTCTTGAGGTTT 57.226 33.333 0.00 0.00 0.00 3.27
538 539 6.773976 TGTTTGAATCTGTCTTGAGGTTTT 57.226 33.333 0.00 0.00 0.00 2.43
539 540 6.563422 TGTTTGAATCTGTCTTGAGGTTTTG 58.437 36.000 0.00 0.00 0.00 2.44
540 541 5.772825 TTGAATCTGTCTTGAGGTTTTGG 57.227 39.130 0.00 0.00 0.00 3.28
541 542 4.792068 TGAATCTGTCTTGAGGTTTTGGT 58.208 39.130 0.00 0.00 0.00 3.67
542 543 5.935945 TGAATCTGTCTTGAGGTTTTGGTA 58.064 37.500 0.00 0.00 0.00 3.25
543 544 5.997746 TGAATCTGTCTTGAGGTTTTGGTAG 59.002 40.000 0.00 0.00 0.00 3.18
544 545 5.568620 ATCTGTCTTGAGGTTTTGGTAGT 57.431 39.130 0.00 0.00 0.00 2.73
545 546 6.681729 ATCTGTCTTGAGGTTTTGGTAGTA 57.318 37.500 0.00 0.00 0.00 1.82
546 547 6.681729 TCTGTCTTGAGGTTTTGGTAGTAT 57.318 37.500 0.00 0.00 0.00 2.12
547 548 7.074653 TCTGTCTTGAGGTTTTGGTAGTATT 57.925 36.000 0.00 0.00 0.00 1.89
548 549 6.934645 TCTGTCTTGAGGTTTTGGTAGTATTG 59.065 38.462 0.00 0.00 0.00 1.90
549 550 5.472137 TGTCTTGAGGTTTTGGTAGTATTGC 59.528 40.000 0.00 0.00 0.00 3.56
550 551 5.472137 GTCTTGAGGTTTTGGTAGTATTGCA 59.528 40.000 0.00 0.00 0.00 4.08
551 552 6.151144 GTCTTGAGGTTTTGGTAGTATTGCAT 59.849 38.462 0.00 0.00 0.00 3.96
552 553 7.335924 GTCTTGAGGTTTTGGTAGTATTGCATA 59.664 37.037 0.00 0.00 0.00 3.14
553 554 8.052748 TCTTGAGGTTTTGGTAGTATTGCATAT 58.947 33.333 0.00 0.00 0.00 1.78
554 555 9.337396 CTTGAGGTTTTGGTAGTATTGCATATA 57.663 33.333 0.00 0.00 0.00 0.86
555 556 9.860650 TTGAGGTTTTGGTAGTATTGCATATAT 57.139 29.630 0.00 0.00 0.00 0.86
556 557 9.860650 TGAGGTTTTGGTAGTATTGCATATATT 57.139 29.630 0.00 0.00 0.00 1.28
565 566 9.893305 GGTAGTATTGCATATATTTCAAACACC 57.107 33.333 0.00 4.20 0.00 4.16
569 570 9.964303 GTATTGCATATATTTCAAACACCATCA 57.036 29.630 0.00 0.00 0.00 3.07
571 572 9.887629 ATTGCATATATTTCAAACACCATCAAA 57.112 25.926 0.00 0.00 0.00 2.69
572 573 9.716531 TTGCATATATTTCAAACACCATCAAAA 57.283 25.926 0.00 0.00 0.00 2.44
573 574 9.887629 TGCATATATTTCAAACACCATCAAAAT 57.112 25.926 0.00 0.00 0.00 1.82
578 579 6.702972 TTTCAAACACCATCAAAATATGCG 57.297 33.333 0.00 0.00 0.00 4.73
579 580 5.635417 TCAAACACCATCAAAATATGCGA 57.365 34.783 0.00 0.00 0.00 5.10
580 581 6.018589 TCAAACACCATCAAAATATGCGAA 57.981 33.333 0.00 0.00 0.00 4.70
581 582 6.450545 TCAAACACCATCAAAATATGCGAAA 58.549 32.000 0.00 0.00 0.00 3.46
582 583 7.095910 TCAAACACCATCAAAATATGCGAAAT 58.904 30.769 0.00 0.00 0.00 2.17
583 584 7.601886 TCAAACACCATCAAAATATGCGAAATT 59.398 29.630 0.00 0.00 0.00 1.82
584 585 7.903995 AACACCATCAAAATATGCGAAATTT 57.096 28.000 0.00 0.00 0.00 1.82
585 586 7.293402 ACACCATCAAAATATGCGAAATTTG 57.707 32.000 0.00 0.00 34.81 2.32
586 587 6.313411 ACACCATCAAAATATGCGAAATTTGG 59.687 34.615 0.00 0.00 34.39 3.28
587 588 6.534436 CACCATCAAAATATGCGAAATTTGGA 59.466 34.615 4.16 0.00 34.39 3.53
588 589 7.064371 CACCATCAAAATATGCGAAATTTGGAA 59.936 33.333 4.16 0.00 31.66 3.53
589 590 7.605691 ACCATCAAAATATGCGAAATTTGGAAA 59.394 29.630 4.16 0.00 31.66 3.13
590 591 8.449397 CCATCAAAATATGCGAAATTTGGAAAA 58.551 29.630 4.16 0.00 31.66 2.29
591 592 9.264782 CATCAAAATATGCGAAATTTGGAAAAC 57.735 29.630 4.16 0.00 31.66 2.43
592 593 8.600449 TCAAAATATGCGAAATTTGGAAAACT 57.400 26.923 4.16 0.00 34.39 2.66
593 594 9.050601 TCAAAATATGCGAAATTTGGAAAACTT 57.949 25.926 4.16 0.00 34.39 2.66
594 595 9.662545 CAAAATATGCGAAATTTGGAAAACTTT 57.337 25.926 4.16 0.00 0.00 2.66
599 600 8.600449 ATGCGAAATTTGGAAAACTTTATTGA 57.400 26.923 4.16 0.00 0.00 2.57
600 601 8.425577 TGCGAAATTTGGAAAACTTTATTGAA 57.574 26.923 4.16 0.00 0.00 2.69
601 602 9.050601 TGCGAAATTTGGAAAACTTTATTGAAT 57.949 25.926 4.16 0.00 0.00 2.57
602 603 9.877137 GCGAAATTTGGAAAACTTTATTGAATT 57.123 25.926 4.16 0.00 0.00 2.17
624 625 3.885976 TTTAACCCTGATTGTGGACCA 57.114 42.857 0.00 0.00 0.00 4.02
625 626 4.396357 TTTAACCCTGATTGTGGACCAT 57.604 40.909 0.00 0.00 0.00 3.55
626 627 2.220653 AACCCTGATTGTGGACCATG 57.779 50.000 0.00 0.00 0.00 3.66
627 628 1.075601 ACCCTGATTGTGGACCATGT 58.924 50.000 0.00 0.00 0.00 3.21
688 704 3.057315 CGCTTTGACCCAGTTGATTTGAT 60.057 43.478 0.00 0.00 0.00 2.57
757 807 3.967335 GTCTCGGGGCCTCGATCG 61.967 72.222 31.46 18.92 38.55 3.69
852 912 5.176406 GTCGTCTTCCCCGCTATAAATAAAC 59.824 44.000 0.00 0.00 0.00 2.01
888 948 4.628333 TCTTGTTCCCGTATTTTAAGCTCG 59.372 41.667 0.00 0.00 0.00 5.03
924 984 6.620877 TTCACTATTCATCCCACTGTAGTT 57.379 37.500 0.00 0.00 0.00 2.24
926 986 5.483937 TCACTATTCATCCCACTGTAGTTGT 59.516 40.000 0.00 0.00 0.00 3.32
927 987 6.666113 TCACTATTCATCCCACTGTAGTTGTA 59.334 38.462 0.00 0.00 0.00 2.41
928 988 6.757010 CACTATTCATCCCACTGTAGTTGTAC 59.243 42.308 0.00 0.00 0.00 2.90
974 1038 7.600375 AGCACGTACTACTAGCTCGTATATAAA 59.400 37.037 0.00 0.00 33.49 1.40
975 1039 7.686120 GCACGTACTACTAGCTCGTATATAAAC 59.314 40.741 0.00 0.00 33.49 2.01
976 1040 8.165428 CACGTACTACTAGCTCGTATATAAACC 58.835 40.741 0.00 0.00 33.49 3.27
998 1062 0.326264 CTCCACCACCTGCTAGCTTT 59.674 55.000 17.23 0.00 0.00 3.51
1697 1788 1.677966 AGCAACATCAGCAGCAGGG 60.678 57.895 0.00 0.00 0.00 4.45
1755 1846 4.832608 GCCTACGGCGGGGTTCTG 62.833 72.222 13.24 0.00 39.62 3.02
1931 2029 1.050767 CGTTCACGTTCGTTCTCCTC 58.949 55.000 0.00 0.00 34.11 3.71
2021 2130 1.367665 GTTGTGCGAGTTGTGCGAC 60.368 57.895 0.00 0.00 34.24 5.19
2022 2131 1.520564 TTGTGCGAGTTGTGCGACT 60.521 52.632 0.00 0.00 34.24 4.18
2023 2132 1.761244 TTGTGCGAGTTGTGCGACTG 61.761 55.000 0.00 0.00 34.24 3.51
2024 2133 3.337889 TGCGAGTTGTGCGACTGC 61.338 61.111 0.00 2.73 43.20 4.40
2057 2167 3.155093 CATGCAATGGTTTCTGGTAGC 57.845 47.619 0.00 0.00 41.79 3.58
2068 2178 1.242989 TCTGGTAGCGCATGCAAAAA 58.757 45.000 19.57 0.00 46.23 1.94
2097 2207 2.890945 AGGTGGTTCCGAAGAAAAATGG 59.109 45.455 0.00 0.00 41.99 3.16
2101 2211 2.233676 GGTTCCGAAGAAAAATGGGCAT 59.766 45.455 0.00 0.00 32.58 4.40
2102 2212 3.253230 GTTCCGAAGAAAAATGGGCATG 58.747 45.455 0.00 0.00 32.58 4.06
2103 2213 2.801483 TCCGAAGAAAAATGGGCATGA 58.199 42.857 0.00 0.00 0.00 3.07
2104 2214 2.754552 TCCGAAGAAAAATGGGCATGAG 59.245 45.455 0.00 0.00 0.00 2.90
2105 2215 2.754552 CCGAAGAAAAATGGGCATGAGA 59.245 45.455 0.00 0.00 0.00 3.27
2106 2216 3.193267 CCGAAGAAAAATGGGCATGAGAA 59.807 43.478 0.00 0.00 0.00 2.87
2107 2217 4.321899 CCGAAGAAAAATGGGCATGAGAAA 60.322 41.667 0.00 0.00 0.00 2.52
2108 2218 5.413499 CGAAGAAAAATGGGCATGAGAAAT 58.587 37.500 0.00 0.00 0.00 2.17
2122 2232 6.459298 GGCATGAGAAATTGAGAATGAACGAT 60.459 38.462 0.00 0.00 0.00 3.73
2123 2233 6.414109 GCATGAGAAATTGAGAATGAACGATG 59.586 38.462 0.00 0.00 0.00 3.84
2124 2234 6.426980 TGAGAAATTGAGAATGAACGATGG 57.573 37.500 0.00 0.00 0.00 3.51
2125 2235 6.172630 TGAGAAATTGAGAATGAACGATGGA 58.827 36.000 0.00 0.00 0.00 3.41
2126 2236 6.825213 TGAGAAATTGAGAATGAACGATGGAT 59.175 34.615 0.00 0.00 0.00 3.41
2127 2237 7.024340 AGAAATTGAGAATGAACGATGGATG 57.976 36.000 0.00 0.00 0.00 3.51
2128 2238 6.825213 AGAAATTGAGAATGAACGATGGATGA 59.175 34.615 0.00 0.00 0.00 2.92
2129 2239 7.501559 AGAAATTGAGAATGAACGATGGATGAT 59.498 33.333 0.00 0.00 0.00 2.45
2130 2240 5.996669 TTGAGAATGAACGATGGATGATG 57.003 39.130 0.00 0.00 0.00 3.07
2131 2241 5.280654 TGAGAATGAACGATGGATGATGA 57.719 39.130 0.00 0.00 0.00 2.92
2132 2242 5.861727 TGAGAATGAACGATGGATGATGAT 58.138 37.500 0.00 0.00 0.00 2.45
2133 2243 6.293698 TGAGAATGAACGATGGATGATGATT 58.706 36.000 0.00 0.00 0.00 2.57
2134 2244 6.204108 TGAGAATGAACGATGGATGATGATTG 59.796 38.462 0.00 0.00 0.00 2.67
2135 2245 6.293698 AGAATGAACGATGGATGATGATTGA 58.706 36.000 0.00 0.00 0.00 2.57
2136 2246 6.769341 AGAATGAACGATGGATGATGATTGAA 59.231 34.615 0.00 0.00 0.00 2.69
2137 2247 7.447545 AGAATGAACGATGGATGATGATTGAAT 59.552 33.333 0.00 0.00 0.00 2.57
2138 2248 6.947644 TGAACGATGGATGATGATTGAATT 57.052 33.333 0.00 0.00 0.00 2.17
2139 2249 6.962686 TGAACGATGGATGATGATTGAATTC 58.037 36.000 0.00 0.00 0.00 2.17
2140 2250 6.769341 TGAACGATGGATGATGATTGAATTCT 59.231 34.615 7.05 0.00 0.00 2.40
2141 2251 7.283807 TGAACGATGGATGATGATTGAATTCTT 59.716 33.333 7.05 0.00 0.00 2.52
2142 2252 7.578310 ACGATGGATGATGATTGAATTCTTT 57.422 32.000 7.05 0.00 0.00 2.52
2143 2253 7.423199 ACGATGGATGATGATTGAATTCTTTG 58.577 34.615 7.05 0.00 0.00 2.77
2144 2254 7.283807 ACGATGGATGATGATTGAATTCTTTGA 59.716 33.333 7.05 0.00 0.00 2.69
2145 2255 8.132995 CGATGGATGATGATTGAATTCTTTGAA 58.867 33.333 7.05 0.00 0.00 2.69
2146 2256 9.982651 GATGGATGATGATTGAATTCTTTGAAT 57.017 29.630 7.05 0.00 0.00 2.57
2169 2279 5.633927 TCTTTGATGAATCATTGTTGAGCG 58.366 37.500 0.00 0.00 36.56 5.03
2175 2285 5.484173 TGAATCATTGTTGAGCGGAATAC 57.516 39.130 0.00 0.00 34.73 1.89
2207 2317 1.068333 GCTTTGATCACAATGGCACGT 60.068 47.619 0.00 0.00 36.20 4.49
2208 2318 2.161410 GCTTTGATCACAATGGCACGTA 59.839 45.455 0.00 0.00 36.20 3.57
2209 2319 3.747193 CTTTGATCACAATGGCACGTAC 58.253 45.455 0.00 0.00 35.85 3.67
2210 2320 2.760634 TGATCACAATGGCACGTACT 57.239 45.000 0.00 0.00 0.00 2.73
2211 2321 2.616960 TGATCACAATGGCACGTACTC 58.383 47.619 0.00 0.00 0.00 2.59
2212 2322 1.933853 GATCACAATGGCACGTACTCC 59.066 52.381 0.00 0.00 0.00 3.85
2213 2323 0.036765 TCACAATGGCACGTACTCCC 60.037 55.000 0.00 0.00 0.00 4.30
2214 2324 0.036388 CACAATGGCACGTACTCCCT 60.036 55.000 0.00 0.00 0.00 4.20
2215 2325 0.249398 ACAATGGCACGTACTCCCTC 59.751 55.000 0.00 0.00 0.00 4.30
2216 2326 0.462047 CAATGGCACGTACTCCCTCC 60.462 60.000 0.00 0.00 0.00 4.30
2217 2327 1.956629 AATGGCACGTACTCCCTCCG 61.957 60.000 0.00 0.00 0.00 4.63
2218 2328 3.066814 GGCACGTACTCCCTCCGT 61.067 66.667 0.00 0.00 34.71 4.69
2219 2329 2.643232 GGCACGTACTCCCTCCGTT 61.643 63.158 0.00 0.00 31.46 4.44
2220 2330 1.153881 GCACGTACTCCCTCCGTTC 60.154 63.158 0.00 0.00 31.46 3.95
2221 2331 1.509923 CACGTACTCCCTCCGTTCC 59.490 63.158 0.00 0.00 31.46 3.62
2222 2332 0.964358 CACGTACTCCCTCCGTTCCT 60.964 60.000 0.00 0.00 31.46 3.36
2223 2333 0.251519 ACGTACTCCCTCCGTTCCTT 60.252 55.000 0.00 0.00 0.00 3.36
2224 2334 0.893447 CGTACTCCCTCCGTTCCTTT 59.107 55.000 0.00 0.00 0.00 3.11
2225 2335 1.274447 CGTACTCCCTCCGTTCCTTTT 59.726 52.381 0.00 0.00 0.00 2.27
2226 2336 2.289257 CGTACTCCCTCCGTTCCTTTTT 60.289 50.000 0.00 0.00 0.00 1.94
2227 2337 3.056607 CGTACTCCCTCCGTTCCTTTTTA 60.057 47.826 0.00 0.00 0.00 1.52
2228 2338 3.413846 ACTCCCTCCGTTCCTTTTTAC 57.586 47.619 0.00 0.00 0.00 2.01
2229 2339 2.977580 ACTCCCTCCGTTCCTTTTTACT 59.022 45.455 0.00 0.00 0.00 2.24
2230 2340 3.007723 ACTCCCTCCGTTCCTTTTTACTC 59.992 47.826 0.00 0.00 0.00 2.59
2231 2341 3.245441 TCCCTCCGTTCCTTTTTACTCT 58.755 45.455 0.00 0.00 0.00 3.24
2232 2342 3.007614 TCCCTCCGTTCCTTTTTACTCTG 59.992 47.826 0.00 0.00 0.00 3.35
2233 2343 2.742589 CCTCCGTTCCTTTTTACTCTGC 59.257 50.000 0.00 0.00 0.00 4.26
2234 2344 2.409975 TCCGTTCCTTTTTACTCTGCG 58.590 47.619 0.00 0.00 0.00 5.18
2235 2345 2.140717 CCGTTCCTTTTTACTCTGCGT 58.859 47.619 0.00 0.00 0.00 5.24
2236 2346 3.005684 TCCGTTCCTTTTTACTCTGCGTA 59.994 43.478 0.00 0.00 0.00 4.42
2237 2347 3.122445 CCGTTCCTTTTTACTCTGCGTAC 59.878 47.826 0.00 0.00 0.00 3.67
2238 2348 3.737266 CGTTCCTTTTTACTCTGCGTACA 59.263 43.478 0.00 0.00 0.00 2.90
2239 2349 4.209703 CGTTCCTTTTTACTCTGCGTACAA 59.790 41.667 0.00 0.00 0.00 2.41
2240 2350 5.611844 CGTTCCTTTTTACTCTGCGTACAAG 60.612 44.000 0.00 0.00 0.00 3.16
2241 2351 4.952460 TCCTTTTTACTCTGCGTACAAGT 58.048 39.130 0.00 0.00 0.00 3.16
2242 2352 5.362263 TCCTTTTTACTCTGCGTACAAGTT 58.638 37.500 0.00 0.00 0.00 2.66
2243 2353 5.818857 TCCTTTTTACTCTGCGTACAAGTTT 59.181 36.000 0.00 0.00 0.00 2.66
2244 2354 6.316890 TCCTTTTTACTCTGCGTACAAGTTTT 59.683 34.615 0.00 0.00 0.00 2.43
2245 2355 6.413818 CCTTTTTACTCTGCGTACAAGTTTTG 59.586 38.462 0.00 0.00 0.00 2.44
2246 2356 5.412526 TTTACTCTGCGTACAAGTTTTGG 57.587 39.130 0.00 0.00 34.12 3.28
2247 2357 2.914059 ACTCTGCGTACAAGTTTTGGT 58.086 42.857 0.00 0.00 34.12 3.67
2248 2358 2.870411 ACTCTGCGTACAAGTTTTGGTC 59.130 45.455 0.00 0.00 34.12 4.02
2249 2359 2.869801 CTCTGCGTACAAGTTTTGGTCA 59.130 45.455 0.00 0.00 34.12 4.02
2250 2360 3.271729 TCTGCGTACAAGTTTTGGTCAA 58.728 40.909 0.00 0.00 34.12 3.18
2251 2361 3.690139 TCTGCGTACAAGTTTTGGTCAAA 59.310 39.130 0.00 0.00 34.12 2.69
2252 2362 4.022464 TGCGTACAAGTTTTGGTCAAAG 57.978 40.909 0.00 0.00 34.12 2.77
2253 2363 3.440872 TGCGTACAAGTTTTGGTCAAAGT 59.559 39.130 0.00 0.00 34.12 2.66
2254 2364 4.033019 GCGTACAAGTTTTGGTCAAAGTC 58.967 43.478 0.00 0.00 34.12 3.01
2255 2365 4.437659 GCGTACAAGTTTTGGTCAAAGTCA 60.438 41.667 0.00 0.00 34.12 3.41
2256 2366 5.632959 CGTACAAGTTTTGGTCAAAGTCAA 58.367 37.500 0.00 0.00 34.12 3.18
2257 2367 6.087522 CGTACAAGTTTTGGTCAAAGTCAAA 58.912 36.000 0.00 0.00 34.12 2.69
2258 2368 6.033091 CGTACAAGTTTTGGTCAAAGTCAAAC 59.967 38.462 0.00 0.00 33.29 2.93
2259 2369 6.096673 ACAAGTTTTGGTCAAAGTCAAACT 57.903 33.333 0.00 0.00 33.29 2.66
2260 2370 7.222000 ACAAGTTTTGGTCAAAGTCAAACTA 57.778 32.000 0.00 0.00 33.29 2.24
2261 2371 7.088272 ACAAGTTTTGGTCAAAGTCAAACTAC 58.912 34.615 0.00 0.00 33.29 2.73
2262 2372 5.875930 AGTTTTGGTCAAAGTCAAACTACG 58.124 37.500 0.00 0.00 33.29 3.51
2263 2373 3.955771 TTGGTCAAAGTCAAACTACGC 57.044 42.857 0.00 0.00 0.00 4.42
2264 2374 2.907634 TGGTCAAAGTCAAACTACGCA 58.092 42.857 0.00 0.00 0.00 5.24
2265 2375 3.271729 TGGTCAAAGTCAAACTACGCAA 58.728 40.909 0.00 0.00 0.00 4.85
2266 2376 3.690139 TGGTCAAAGTCAAACTACGCAAA 59.310 39.130 0.00 0.00 0.00 3.68
2267 2377 4.156190 TGGTCAAAGTCAAACTACGCAAAA 59.844 37.500 0.00 0.00 0.00 2.44
2268 2378 5.163602 TGGTCAAAGTCAAACTACGCAAAAT 60.164 36.000 0.00 0.00 0.00 1.82
2269 2379 5.746721 GGTCAAAGTCAAACTACGCAAAATT 59.253 36.000 0.00 0.00 0.00 1.82
2270 2380 6.254804 GGTCAAAGTCAAACTACGCAAAATTT 59.745 34.615 0.00 0.00 0.00 1.82
2271 2381 7.110511 GTCAAAGTCAAACTACGCAAAATTTG 58.889 34.615 0.57 0.57 34.11 2.32
2272 2382 7.008810 GTCAAAGTCAAACTACGCAAAATTTGA 59.991 33.333 10.26 0.00 38.42 2.69
2274 2384 5.219113 GTCAAACTACGCAAAATTTGACG 57.781 39.130 10.26 14.11 46.32 4.35
2275 2385 4.965158 GTCAAACTACGCAAAATTTGACGA 59.035 37.500 22.04 10.05 46.32 4.20
2276 2386 5.452944 GTCAAACTACGCAAAATTTGACGAA 59.547 36.000 22.04 1.43 46.32 3.85
2277 2387 6.021311 GTCAAACTACGCAAAATTTGACGAAA 60.021 34.615 22.04 12.41 46.32 3.46
2278 2388 6.693545 TCAAACTACGCAAAATTTGACGAAAT 59.306 30.769 22.04 8.55 36.42 2.17
2279 2389 7.221067 TCAAACTACGCAAAATTTGACGAAATT 59.779 29.630 22.04 12.84 42.49 1.82
2281 2391 8.563289 AACTACGCAAAATTTGACGAAATTTA 57.437 26.923 22.04 8.56 46.52 1.40
2282 2392 8.736751 ACTACGCAAAATTTGACGAAATTTAT 57.263 26.923 22.04 6.99 46.52 1.40
2283 2393 9.828852 ACTACGCAAAATTTGACGAAATTTATA 57.171 25.926 22.04 7.56 46.52 0.98
2345 2455 9.677567 ATGATATAAAAATACATTTCGTGGTGC 57.322 29.630 0.00 0.00 0.00 5.01
2346 2456 8.678199 TGATATAAAAATACATTTCGTGGTGCA 58.322 29.630 0.00 0.00 0.00 4.57
2347 2457 9.677567 GATATAAAAATACATTTCGTGGTGCAT 57.322 29.630 0.00 0.00 0.00 3.96
2348 2458 7.985634 ATAAAAATACATTTCGTGGTGCATC 57.014 32.000 0.00 0.00 0.00 3.91
2349 2459 5.643379 AAAATACATTTCGTGGTGCATCT 57.357 34.783 0.00 0.00 0.00 2.90
2350 2460 6.751514 AAAATACATTTCGTGGTGCATCTA 57.248 33.333 0.00 0.00 0.00 1.98
2351 2461 6.751514 AAATACATTTCGTGGTGCATCTAA 57.248 33.333 0.00 0.00 0.00 2.10
2352 2462 6.751514 AATACATTTCGTGGTGCATCTAAA 57.248 33.333 0.00 0.00 0.00 1.85
2353 2463 6.751514 ATACATTTCGTGGTGCATCTAAAA 57.248 33.333 0.00 0.00 0.00 1.52
2354 2464 5.446143 ACATTTCGTGGTGCATCTAAAAA 57.554 34.783 0.00 0.00 0.00 1.94
2355 2465 6.024552 ACATTTCGTGGTGCATCTAAAAAT 57.975 33.333 0.00 0.00 0.00 1.82
2356 2466 5.863397 ACATTTCGTGGTGCATCTAAAAATG 59.137 36.000 20.29 20.29 38.30 2.32
2357 2467 5.446143 TTTCGTGGTGCATCTAAAAATGT 57.554 34.783 0.00 0.00 0.00 2.71
2358 2468 5.446143 TTCGTGGTGCATCTAAAAATGTT 57.554 34.783 0.00 0.00 0.00 2.71
2359 2469 4.793071 TCGTGGTGCATCTAAAAATGTTG 58.207 39.130 0.00 0.00 0.00 3.33
2360 2470 4.517075 TCGTGGTGCATCTAAAAATGTTGA 59.483 37.500 0.00 0.00 0.00 3.18
2361 2471 5.182950 TCGTGGTGCATCTAAAAATGTTGAT 59.817 36.000 0.00 0.00 0.00 2.57
2362 2472 5.863397 CGTGGTGCATCTAAAAATGTTGATT 59.137 36.000 0.00 0.00 0.00 2.57
2363 2473 6.365789 CGTGGTGCATCTAAAAATGTTGATTT 59.634 34.615 0.00 0.00 32.87 2.17
2364 2474 7.410728 CGTGGTGCATCTAAAAATGTTGATTTC 60.411 37.037 0.00 0.00 30.02 2.17
2365 2475 6.585702 TGGTGCATCTAAAAATGTTGATTTCG 59.414 34.615 0.00 0.00 30.02 3.46
2366 2476 6.586082 GGTGCATCTAAAAATGTTGATTTCGT 59.414 34.615 0.00 0.00 30.02 3.85
2367 2477 7.753132 GGTGCATCTAAAAATGTTGATTTCGTA 59.247 33.333 0.00 0.00 30.02 3.43
2368 2478 9.289303 GTGCATCTAAAAATGTTGATTTCGTAT 57.711 29.630 0.00 0.00 30.02 3.06
2369 2479 9.853555 TGCATCTAAAAATGTTGATTTCGTATT 57.146 25.926 0.00 0.00 30.02 1.89
2421 2531 7.885297 AGTTAATCAAACTATGCAAAGCTTGA 58.115 30.769 0.00 0.00 46.85 3.02
2422 2532 7.809806 AGTTAATCAAACTATGCAAAGCTTGAC 59.190 33.333 0.00 0.00 46.85 3.18
2423 2533 5.972107 ATCAAACTATGCAAAGCTTGACT 57.028 34.783 0.00 0.00 35.14 3.41
2424 2534 5.772825 TCAAACTATGCAAAGCTTGACTT 57.227 34.783 0.00 0.00 41.70 3.01
2436 2546 6.775594 AAAGCTTGACTTTGACTAAACCTT 57.224 33.333 0.00 0.00 47.00 3.50
2437 2547 7.875327 AAAGCTTGACTTTGACTAAACCTTA 57.125 32.000 0.00 0.00 47.00 2.69
2438 2548 8.465273 AAAGCTTGACTTTGACTAAACCTTAT 57.535 30.769 0.00 0.00 47.00 1.73
2439 2549 9.569122 AAAGCTTGACTTTGACTAAACCTTATA 57.431 29.630 0.00 0.00 47.00 0.98
2440 2550 9.740710 AAGCTTGACTTTGACTAAACCTTATAT 57.259 29.630 0.00 0.00 33.71 0.86
2441 2551 9.167311 AGCTTGACTTTGACTAAACCTTATATG 57.833 33.333 0.00 0.00 0.00 1.78
2442 2552 7.910683 GCTTGACTTTGACTAAACCTTATATGC 59.089 37.037 0.00 0.00 0.00 3.14
2443 2553 8.856153 TTGACTTTGACTAAACCTTATATGCA 57.144 30.769 0.00 0.00 0.00 3.96
2444 2554 8.492673 TGACTTTGACTAAACCTTATATGCAG 57.507 34.615 0.00 0.00 0.00 4.41
2445 2555 8.318412 TGACTTTGACTAAACCTTATATGCAGA 58.682 33.333 0.00 0.00 0.00 4.26
2446 2556 8.494016 ACTTTGACTAAACCTTATATGCAGAC 57.506 34.615 0.00 0.00 0.00 3.51
2447 2557 8.322091 ACTTTGACTAAACCTTATATGCAGACT 58.678 33.333 0.00 0.00 0.00 3.24
2448 2558 9.817809 CTTTGACTAAACCTTATATGCAGACTA 57.182 33.333 0.00 0.00 0.00 2.59
2471 2581 2.632987 AAAAACGGAGGCAGTACAGT 57.367 45.000 0.00 0.00 0.00 3.55
2472 2582 3.756933 AAAAACGGAGGCAGTACAGTA 57.243 42.857 0.00 0.00 0.00 2.74
2473 2583 2.738013 AAACGGAGGCAGTACAGTAC 57.262 50.000 2.05 2.05 0.00 2.73
2487 2597 1.544691 ACAGTACTACGCAGACCCAAG 59.455 52.381 0.00 0.00 0.00 3.61
2700 2841 0.616371 TGTGGGGTTTCCGATGTAGG 59.384 55.000 0.00 0.00 38.76 3.18
2744 2885 3.575965 AAATAAAAGCTGAAGCCACCG 57.424 42.857 0.00 0.00 43.38 4.94
2760 2901 3.418675 CCGTGTGGTACTGCTACTG 57.581 57.895 0.00 0.00 0.00 2.74
2773 2914 0.248949 GCTACTGCTAGTACGGTGCC 60.249 60.000 0.00 0.00 36.03 5.01
2795 2936 0.325933 TGCTGCCACACTAGCTTCAT 59.674 50.000 0.00 0.00 40.52 2.57
2807 2948 1.494960 AGCTTCATCCTCCAGAGACC 58.505 55.000 0.00 0.00 0.00 3.85
2835 2976 4.333926 GCAGAGGGAGCAAACAAATAGTAG 59.666 45.833 0.00 0.00 0.00 2.57
2836 2977 5.491982 CAGAGGGAGCAAACAAATAGTAGT 58.508 41.667 0.00 0.00 0.00 2.73
2837 2978 6.640518 CAGAGGGAGCAAACAAATAGTAGTA 58.359 40.000 0.00 0.00 0.00 1.82
2838 2979 6.758886 CAGAGGGAGCAAACAAATAGTAGTAG 59.241 42.308 0.00 0.00 0.00 2.57
2887 3030 6.692486 TGCAAACATTTACCGAACCAAATAT 58.308 32.000 0.00 0.00 0.00 1.28
2888 3031 7.155328 TGCAAACATTTACCGAACCAAATATT 58.845 30.769 0.00 0.00 0.00 1.28
2896 3040 5.385509 ACCGAACCAAATATTTCAAGGTG 57.614 39.130 8.92 1.57 31.86 4.00
2897 3041 4.830600 ACCGAACCAAATATTTCAAGGTGT 59.169 37.500 8.92 2.08 31.86 4.16
2902 3046 7.487829 CGAACCAAATATTTCAAGGTGTAATGG 59.512 37.037 8.92 2.06 31.86 3.16
2904 3048 7.836842 ACCAAATATTTCAAGGTGTAATGGAC 58.163 34.615 7.67 0.00 0.00 4.02
2907 3051 2.483014 TTCAAGGTGTAATGGACCGG 57.517 50.000 0.00 0.00 38.64 5.28
2924 3068 1.522130 GGTTGTGACGTTCGTGGGT 60.522 57.895 1.74 0.00 0.00 4.51
2925 3069 1.091197 GGTTGTGACGTTCGTGGGTT 61.091 55.000 1.74 0.00 0.00 4.11
2926 3070 0.728542 GTTGTGACGTTCGTGGGTTT 59.271 50.000 1.74 0.00 0.00 3.27
2927 3071 0.727970 TTGTGACGTTCGTGGGTTTG 59.272 50.000 1.74 0.00 0.00 2.93
2928 3072 1.090625 TGTGACGTTCGTGGGTTTGG 61.091 55.000 1.74 0.00 0.00 3.28
2929 3073 1.524165 TGACGTTCGTGGGTTTGGG 60.524 57.895 1.74 0.00 0.00 4.12
2938 3082 0.949397 GTGGGTTTGGGAACTCGTTC 59.051 55.000 1.22 1.22 39.19 3.95
2943 3087 3.328505 GGTTTGGGAACTCGTTCGATAA 58.671 45.455 3.93 0.00 40.37 1.75
2946 3091 5.006068 GGTTTGGGAACTCGTTCGATAATAC 59.994 44.000 3.93 0.00 40.37 1.89
2953 3098 9.122613 GGGAACTCGTTCGATAATACTATAAAC 57.877 37.037 3.93 0.00 40.37 2.01
2955 3100 9.669353 GAACTCGTTCGATAATACTATAAACCA 57.331 33.333 0.00 0.00 0.00 3.67
2970 3115 8.348983 ACTATAAACCATAATTTCGTCTGTCG 57.651 34.615 0.00 0.00 41.41 4.35
2976 3121 4.570772 CCATAATTTCGTCTGTCGGAACAT 59.429 41.667 0.00 0.00 40.03 2.71
2977 3122 5.064707 CCATAATTTCGTCTGTCGGAACATT 59.935 40.000 0.00 0.00 40.03 2.71
3063 3208 6.462909 GGTTCAAATCCCACTCTTGACAATTT 60.463 38.462 0.00 0.00 0.00 1.82
3064 3209 6.331369 TCAAATCCCACTCTTGACAATTTC 57.669 37.500 0.00 0.00 0.00 2.17
3065 3210 6.070656 TCAAATCCCACTCTTGACAATTTCT 58.929 36.000 0.00 0.00 0.00 2.52
3066 3211 6.207417 TCAAATCCCACTCTTGACAATTTCTC 59.793 38.462 0.00 0.00 0.00 2.87
3067 3212 4.982241 TCCCACTCTTGACAATTTCTCT 57.018 40.909 0.00 0.00 0.00 3.10
3068 3213 5.310409 TCCCACTCTTGACAATTTCTCTT 57.690 39.130 0.00 0.00 0.00 2.85
3069 3214 5.694995 TCCCACTCTTGACAATTTCTCTTT 58.305 37.500 0.00 0.00 0.00 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.915364 GAGACTCCAAGGGGAAGCAT 59.085 55.000 0.00 0.00 44.38 3.79
1 2 1.544825 CGAGACTCCAAGGGGAAGCA 61.545 60.000 0.00 0.00 44.38 3.91
2 3 1.219393 CGAGACTCCAAGGGGAAGC 59.781 63.158 0.00 0.00 44.38 3.86
3 4 1.901085 CCGAGACTCCAAGGGGAAG 59.099 63.158 0.00 0.00 44.38 3.46
4 5 2.291043 GCCGAGACTCCAAGGGGAA 61.291 63.158 0.00 0.00 44.38 3.97
5 6 2.683933 GCCGAGACTCCAAGGGGA 60.684 66.667 0.00 0.00 42.29 4.81
6 7 4.148825 CGCCGAGACTCCAAGGGG 62.149 72.222 0.00 0.00 0.00 4.79
7 8 4.148825 CCGCCGAGACTCCAAGGG 62.149 72.222 0.00 0.00 0.00 3.95
8 9 4.821589 GCCGCCGAGACTCCAAGG 62.822 72.222 0.00 0.00 0.00 3.61
28 29 1.225104 CAACAACGACGATGACGCG 60.225 57.895 12.41 3.53 43.96 6.01
29 30 0.179282 GACAACAACGACGATGACGC 60.179 55.000 12.41 0.00 43.96 5.19
30 31 0.433492 GGACAACAACGACGATGACG 59.567 55.000 12.41 4.75 45.75 4.35
31 32 0.433492 CGGACAACAACGACGATGAC 59.567 55.000 12.41 1.20 0.00 3.06
32 33 0.311477 TCGGACAACAACGACGATGA 59.689 50.000 12.41 0.00 33.69 2.92
33 34 2.803979 TCGGACAACAACGACGATG 58.196 52.632 0.00 1.72 33.69 3.84
38 39 0.456628 TCTGTGTCGGACAACAACGA 59.543 50.000 13.23 5.69 32.80 3.85
39 40 0.852777 CTCTGTGTCGGACAACAACG 59.147 55.000 13.23 3.61 32.80 4.10
40 41 1.202486 TCCTCTGTGTCGGACAACAAC 60.202 52.381 13.23 0.74 32.80 3.32
41 42 1.116308 TCCTCTGTGTCGGACAACAA 58.884 50.000 13.23 0.92 32.80 2.83
42 43 1.000843 CATCCTCTGTGTCGGACAACA 59.999 52.381 13.23 11.95 32.80 3.33
43 44 1.272490 TCATCCTCTGTGTCGGACAAC 59.728 52.381 13.23 7.96 32.80 3.32
44 45 1.272490 GTCATCCTCTGTGTCGGACAA 59.728 52.381 13.23 2.86 32.80 3.18
45 46 0.888619 GTCATCCTCTGTGTCGGACA 59.111 55.000 6.76 6.76 30.90 4.02
46 47 0.179161 CGTCATCCTCTGTGTCGGAC 60.179 60.000 0.00 0.00 30.90 4.79
47 48 0.322187 TCGTCATCCTCTGTGTCGGA 60.322 55.000 0.00 0.00 0.00 4.55
48 49 0.179161 GTCGTCATCCTCTGTGTCGG 60.179 60.000 0.00 0.00 0.00 4.79
49 50 0.521450 CGTCGTCATCCTCTGTGTCG 60.521 60.000 0.00 0.00 0.00 4.35
50 51 0.803117 TCGTCGTCATCCTCTGTGTC 59.197 55.000 0.00 0.00 0.00 3.67
51 52 0.522180 GTCGTCGTCATCCTCTGTGT 59.478 55.000 0.00 0.00 0.00 3.72
52 53 0.521450 CGTCGTCGTCATCCTCTGTG 60.521 60.000 0.00 0.00 0.00 3.66
53 54 0.672711 TCGTCGTCGTCATCCTCTGT 60.673 55.000 1.33 0.00 38.33 3.41
54 55 0.446616 TTCGTCGTCGTCATCCTCTG 59.553 55.000 1.33 0.00 38.33 3.35
55 56 1.162698 TTTCGTCGTCGTCATCCTCT 58.837 50.000 1.33 0.00 38.33 3.69
56 57 1.846782 CATTTCGTCGTCGTCATCCTC 59.153 52.381 1.33 0.00 38.33 3.71
57 58 1.471287 TCATTTCGTCGTCGTCATCCT 59.529 47.619 1.33 0.00 38.33 3.24
58 59 1.904144 TCATTTCGTCGTCGTCATCC 58.096 50.000 1.33 0.00 38.33 3.51
59 60 3.105937 TCATCATTTCGTCGTCGTCATC 58.894 45.455 1.33 0.00 38.33 2.92
60 61 3.145212 TCATCATTTCGTCGTCGTCAT 57.855 42.857 1.33 0.00 38.33 3.06
61 62 2.622546 TCATCATTTCGTCGTCGTCA 57.377 45.000 1.33 0.00 38.33 4.35
62 63 2.852413 ACATCATCATTTCGTCGTCGTC 59.148 45.455 1.33 0.00 38.33 4.20
63 64 2.852413 GACATCATCATTTCGTCGTCGT 59.148 45.455 1.33 0.00 38.33 4.34
64 65 2.851824 TGACATCATCATTTCGTCGTCG 59.148 45.455 0.00 0.00 33.21 5.12
65 66 3.859961 ACTGACATCATCATTTCGTCGTC 59.140 43.478 0.00 0.00 36.48 4.20
66 67 3.849911 ACTGACATCATCATTTCGTCGT 58.150 40.909 0.00 0.00 36.48 4.34
67 68 3.859386 TGACTGACATCATCATTTCGTCG 59.141 43.478 0.00 0.00 36.48 5.12
68 69 4.259570 CGTGACTGACATCATCATTTCGTC 60.260 45.833 0.00 0.00 36.48 4.20
69 70 3.614176 CGTGACTGACATCATCATTTCGT 59.386 43.478 0.00 0.00 36.48 3.85
70 71 3.542875 GCGTGACTGACATCATCATTTCG 60.543 47.826 0.00 0.00 36.48 3.46
71 72 3.542875 CGCGTGACTGACATCATCATTTC 60.543 47.826 0.00 0.00 36.48 2.17
72 73 2.349580 CGCGTGACTGACATCATCATTT 59.650 45.455 0.00 0.00 36.48 2.32
73 74 1.929169 CGCGTGACTGACATCATCATT 59.071 47.619 0.00 0.00 36.48 2.57
74 75 1.134995 ACGCGTGACTGACATCATCAT 60.135 47.619 12.93 0.00 36.48 2.45
75 76 0.243636 ACGCGTGACTGACATCATCA 59.756 50.000 12.93 0.00 35.45 3.07
76 77 0.917259 GACGCGTGACTGACATCATC 59.083 55.000 20.70 0.00 0.00 2.92
77 78 0.798389 CGACGCGTGACTGACATCAT 60.798 55.000 20.70 0.00 0.00 2.45
78 79 1.442017 CGACGCGTGACTGACATCA 60.442 57.895 20.70 0.00 0.00 3.07
79 80 2.152699 CCGACGCGTGACTGACATC 61.153 63.158 20.70 0.00 0.00 3.06
80 81 2.126463 CCGACGCGTGACTGACAT 60.126 61.111 20.70 0.00 0.00 3.06
81 82 4.337060 CCCGACGCGTGACTGACA 62.337 66.667 20.70 0.00 0.00 3.58
97 98 4.090057 GAGCAGAAACACGGCGCC 62.090 66.667 19.07 19.07 43.97 6.53
98 99 4.090057 GGAGCAGAAACACGGCGC 62.090 66.667 6.90 0.00 43.97 6.53
99 100 1.970917 GATGGAGCAGAAACACGGCG 61.971 60.000 4.80 4.80 43.97 6.46
100 101 0.955428 TGATGGAGCAGAAACACGGC 60.955 55.000 0.00 0.00 39.85 5.68
101 102 0.798776 GTGATGGAGCAGAAACACGG 59.201 55.000 0.00 0.00 0.00 4.94
102 103 0.439985 CGTGATGGAGCAGAAACACG 59.560 55.000 0.00 0.00 43.10 4.49
103 104 1.728971 CTCGTGATGGAGCAGAAACAC 59.271 52.381 0.00 0.00 0.00 3.32
104 105 1.344438 ACTCGTGATGGAGCAGAAACA 59.656 47.619 0.00 0.00 37.57 2.83
105 106 2.086054 ACTCGTGATGGAGCAGAAAC 57.914 50.000 0.00 0.00 37.57 2.78
106 107 2.224281 ACAACTCGTGATGGAGCAGAAA 60.224 45.455 0.00 0.00 37.57 2.52
107 108 1.344438 ACAACTCGTGATGGAGCAGAA 59.656 47.619 0.00 0.00 37.57 3.02
108 109 0.969149 ACAACTCGTGATGGAGCAGA 59.031 50.000 0.00 0.00 37.57 4.26
109 110 3.521995 ACAACTCGTGATGGAGCAG 57.478 52.632 0.00 0.00 37.57 4.24
119 120 0.318784 GAGAGAACCGCACAACTCGT 60.319 55.000 0.00 0.00 34.98 4.18
120 121 0.039074 AGAGAGAACCGCACAACTCG 60.039 55.000 0.00 0.00 34.98 4.18
121 122 1.000163 TGAGAGAGAACCGCACAACTC 60.000 52.381 0.00 0.00 0.00 3.01
122 123 1.000283 CTGAGAGAGAACCGCACAACT 60.000 52.381 0.00 0.00 0.00 3.16
123 124 1.423395 CTGAGAGAGAACCGCACAAC 58.577 55.000 0.00 0.00 0.00 3.32
124 125 0.318441 CCTGAGAGAGAACCGCACAA 59.682 55.000 0.00 0.00 0.00 3.33
125 126 0.539669 TCCTGAGAGAGAACCGCACA 60.540 55.000 0.00 0.00 0.00 4.57
126 127 0.109039 GTCCTGAGAGAGAACCGCAC 60.109 60.000 0.00 0.00 0.00 5.34
127 128 1.587043 CGTCCTGAGAGAGAACCGCA 61.587 60.000 0.00 0.00 0.00 5.69
128 129 1.137825 CGTCCTGAGAGAGAACCGC 59.862 63.158 0.00 0.00 0.00 5.68
129 130 1.137825 GCGTCCTGAGAGAGAACCG 59.862 63.158 0.00 0.00 0.00 4.44
130 131 0.172352 CAGCGTCCTGAGAGAGAACC 59.828 60.000 0.00 0.00 41.77 3.62
131 132 0.457681 GCAGCGTCCTGAGAGAGAAC 60.458 60.000 0.00 0.00 41.77 3.01
132 133 1.599606 GGCAGCGTCCTGAGAGAGAA 61.600 60.000 0.00 0.00 41.77 2.87
133 134 2.049185 GGCAGCGTCCTGAGAGAGA 61.049 63.158 0.00 0.00 41.77 3.10
134 135 1.674764 ATGGCAGCGTCCTGAGAGAG 61.675 60.000 0.00 0.00 41.77 3.20
135 136 1.670949 GATGGCAGCGTCCTGAGAGA 61.671 60.000 0.00 0.00 41.77 3.10
136 137 1.227205 GATGGCAGCGTCCTGAGAG 60.227 63.158 0.00 0.00 41.77 3.20
137 138 1.683707 AGATGGCAGCGTCCTGAGA 60.684 57.895 0.00 0.00 41.77 3.27
138 139 1.521010 CAGATGGCAGCGTCCTGAG 60.521 63.158 0.00 0.00 41.77 3.35
139 140 2.580815 CAGATGGCAGCGTCCTGA 59.419 61.111 0.00 0.00 41.77 3.86
140 141 3.200593 GCAGATGGCAGCGTCCTG 61.201 66.667 0.00 0.00 43.97 3.86
150 151 4.827087 AGCTGGCGTCGCAGATGG 62.827 66.667 20.50 4.79 45.11 3.51
152 153 3.596066 AACAGCTGGCGTCGCAGAT 62.596 57.895 20.50 10.40 40.67 2.90
153 154 4.299547 AACAGCTGGCGTCGCAGA 62.300 61.111 20.50 3.61 0.00 4.26
154 155 4.081030 CAACAGCTGGCGTCGCAG 62.081 66.667 20.50 14.93 0.00 5.18
155 156 4.908687 ACAACAGCTGGCGTCGCA 62.909 61.111 20.50 4.36 0.00 5.10
156 157 4.374702 CACAACAGCTGGCGTCGC 62.375 66.667 19.93 9.22 0.00 5.19
157 158 2.661537 TCACAACAGCTGGCGTCG 60.662 61.111 19.93 9.23 0.00 5.12
158 159 1.560860 GAGTCACAACAGCTGGCGTC 61.561 60.000 19.93 3.70 0.00 5.19
159 160 1.595382 GAGTCACAACAGCTGGCGT 60.595 57.895 19.93 11.67 0.00 5.68
160 161 2.320587 GGAGTCACAACAGCTGGCG 61.321 63.158 19.93 10.96 0.00 5.69
161 162 0.952984 GAGGAGTCACAACAGCTGGC 60.953 60.000 19.93 0.79 0.00 4.85
162 163 0.321122 GGAGGAGTCACAACAGCTGG 60.321 60.000 19.93 3.21 0.00 4.85
163 164 0.394192 TGGAGGAGTCACAACAGCTG 59.606 55.000 13.48 13.48 0.00 4.24
164 165 0.683973 CTGGAGGAGTCACAACAGCT 59.316 55.000 0.00 0.00 0.00 4.24
165 166 0.952984 GCTGGAGGAGTCACAACAGC 60.953 60.000 10.99 10.99 43.50 4.40
166 167 0.321122 GGCTGGAGGAGTCACAACAG 60.321 60.000 0.00 0.00 0.00 3.16
167 168 1.754745 GGCTGGAGGAGTCACAACA 59.245 57.895 0.00 0.00 0.00 3.33
168 169 1.003233 GGGCTGGAGGAGTCACAAC 60.003 63.158 0.00 0.00 0.00 3.32
169 170 2.224159 GGGGCTGGAGGAGTCACAA 61.224 63.158 0.00 0.00 25.90 3.33
170 171 2.607750 GGGGCTGGAGGAGTCACA 60.608 66.667 0.00 0.00 25.90 3.58
171 172 1.997874 ATGGGGCTGGAGGAGTCAC 60.998 63.158 0.00 0.00 0.00 3.67
172 173 1.997311 CATGGGGCTGGAGGAGTCA 60.997 63.158 0.00 0.00 0.00 3.41
173 174 2.914289 CATGGGGCTGGAGGAGTC 59.086 66.667 0.00 0.00 0.00 3.36
174 175 3.415087 GCATGGGGCTGGAGGAGT 61.415 66.667 0.00 0.00 40.25 3.85
175 176 4.559063 CGCATGGGGCTGGAGGAG 62.559 72.222 0.89 0.00 41.67 3.69
178 179 4.100084 TCACGCATGGGGCTGGAG 62.100 66.667 14.94 0.00 41.67 3.86
179 180 4.100084 CTCACGCATGGGGCTGGA 62.100 66.667 14.94 5.30 41.67 3.86
180 181 4.100084 TCTCACGCATGGGGCTGG 62.100 66.667 14.94 1.02 41.67 4.85
181 182 2.513204 CTCTCACGCATGGGGCTG 60.513 66.667 14.94 4.40 41.67 4.85
182 183 2.596851 AACTCTCACGCATGGGGCT 61.597 57.895 14.94 0.00 41.67 5.19
183 184 2.045926 AACTCTCACGCATGGGGC 60.046 61.111 14.94 0.00 39.90 5.80
184 185 2.401766 GCAACTCTCACGCATGGGG 61.402 63.158 14.94 3.45 0.00 4.96
185 186 2.401766 GGCAACTCTCACGCATGGG 61.402 63.158 8.44 8.44 0.00 4.00
186 187 2.743752 CGGCAACTCTCACGCATGG 61.744 63.158 0.00 0.00 0.00 3.66
187 188 2.780643 CGGCAACTCTCACGCATG 59.219 61.111 0.00 0.00 0.00 4.06
191 192 0.238289 AAAATGCGGCAACTCTCACG 59.762 50.000 6.82 0.00 0.00 4.35
192 193 2.053627 CAAAAATGCGGCAACTCTCAC 58.946 47.619 6.82 0.00 0.00 3.51
193 194 1.952990 TCAAAAATGCGGCAACTCTCA 59.047 42.857 6.82 0.00 0.00 3.27
194 195 2.589014 CTCAAAAATGCGGCAACTCTC 58.411 47.619 6.82 0.00 0.00 3.20
195 196 1.270550 CCTCAAAAATGCGGCAACTCT 59.729 47.619 6.82 0.00 0.00 3.24
196 197 1.701704 CCTCAAAAATGCGGCAACTC 58.298 50.000 6.82 0.00 0.00 3.01
197 198 0.319813 GCCTCAAAAATGCGGCAACT 60.320 50.000 6.82 0.00 42.06 3.16
198 199 2.153039 GCCTCAAAAATGCGGCAAC 58.847 52.632 6.82 0.00 42.06 4.17
199 200 4.671406 GCCTCAAAAATGCGGCAA 57.329 50.000 6.82 0.00 42.06 4.52
201 202 1.616872 CGTTGCCTCAAAAATGCGGC 61.617 55.000 2.97 2.97 42.78 6.53
202 203 0.039617 TCGTTGCCTCAAAAATGCGG 60.040 50.000 0.00 0.00 0.00 5.69
203 204 1.052287 GTCGTTGCCTCAAAAATGCG 58.948 50.000 0.00 0.00 0.00 4.73
204 205 2.132740 TGTCGTTGCCTCAAAAATGC 57.867 45.000 0.00 0.00 0.00 3.56
205 206 3.443037 TGTTGTCGTTGCCTCAAAAATG 58.557 40.909 0.00 0.00 0.00 2.32
206 207 3.490761 CCTGTTGTCGTTGCCTCAAAAAT 60.491 43.478 0.00 0.00 0.00 1.82
207 208 2.159310 CCTGTTGTCGTTGCCTCAAAAA 60.159 45.455 0.00 0.00 0.00 1.94
208 209 1.403679 CCTGTTGTCGTTGCCTCAAAA 59.596 47.619 0.00 0.00 0.00 2.44
209 210 1.021202 CCTGTTGTCGTTGCCTCAAA 58.979 50.000 0.00 0.00 0.00 2.69
210 211 1.444119 GCCTGTTGTCGTTGCCTCAA 61.444 55.000 0.00 0.00 0.00 3.02
211 212 1.891919 GCCTGTTGTCGTTGCCTCA 60.892 57.895 0.00 0.00 0.00 3.86
212 213 1.237285 ATGCCTGTTGTCGTTGCCTC 61.237 55.000 0.00 0.00 0.00 4.70
213 214 1.228245 ATGCCTGTTGTCGTTGCCT 60.228 52.632 0.00 0.00 0.00 4.75
214 215 1.210155 GATGCCTGTTGTCGTTGCC 59.790 57.895 0.00 0.00 0.00 4.52
215 216 0.166814 GAGATGCCTGTTGTCGTTGC 59.833 55.000 0.00 0.00 0.00 4.17
216 217 0.798776 GGAGATGCCTGTTGTCGTTG 59.201 55.000 0.00 0.00 0.00 4.10
217 218 0.396435 TGGAGATGCCTGTTGTCGTT 59.604 50.000 0.00 0.00 37.63 3.85
218 219 0.320771 GTGGAGATGCCTGTTGTCGT 60.321 55.000 0.00 0.00 37.63 4.34
219 220 1.354337 CGTGGAGATGCCTGTTGTCG 61.354 60.000 0.00 0.00 37.63 4.35
220 221 1.021390 CCGTGGAGATGCCTGTTGTC 61.021 60.000 0.00 0.00 37.63 3.18
221 222 1.003355 CCGTGGAGATGCCTGTTGT 60.003 57.895 0.00 0.00 37.63 3.32
222 223 0.107508 ATCCGTGGAGATGCCTGTTG 60.108 55.000 0.00 0.00 37.63 3.33
223 224 0.107508 CATCCGTGGAGATGCCTGTT 60.108 55.000 0.00 0.00 37.44 3.16
224 225 1.267574 ACATCCGTGGAGATGCCTGT 61.268 55.000 1.53 0.00 46.29 4.00
225 226 0.812811 CACATCCGTGGAGATGCCTG 60.813 60.000 1.53 0.00 46.29 4.85
226 227 1.524002 CACATCCGTGGAGATGCCT 59.476 57.895 1.53 0.00 46.29 4.75
227 228 4.131376 CACATCCGTGGAGATGCC 57.869 61.111 1.53 0.00 46.29 4.40
236 237 3.077519 GCCGCTCCTACACATCCGT 62.078 63.158 0.00 0.00 0.00 4.69
237 238 2.279517 GCCGCTCCTACACATCCG 60.280 66.667 0.00 0.00 0.00 4.18
238 239 2.279517 CGCCGCTCCTACACATCC 60.280 66.667 0.00 0.00 0.00 3.51
239 240 0.249489 ATTCGCCGCTCCTACACATC 60.249 55.000 0.00 0.00 0.00 3.06
240 241 0.530650 CATTCGCCGCTCCTACACAT 60.531 55.000 0.00 0.00 0.00 3.21
241 242 1.153647 CATTCGCCGCTCCTACACA 60.154 57.895 0.00 0.00 0.00 3.72
242 243 1.883084 CCATTCGCCGCTCCTACAC 60.883 63.158 0.00 0.00 0.00 2.90
243 244 2.499205 CCATTCGCCGCTCCTACA 59.501 61.111 0.00 0.00 0.00 2.74
244 245 2.967615 GCCATTCGCCGCTCCTAC 60.968 66.667 0.00 0.00 0.00 3.18
245 246 4.585526 CGCCATTCGCCGCTCCTA 62.586 66.667 0.00 0.00 0.00 2.94
262 263 4.516195 GAAGAGGCCCTCCGCGAC 62.516 72.222 8.23 0.00 38.94 5.19
265 266 4.516195 GACGAAGAGGCCCTCCGC 62.516 72.222 7.26 0.00 37.47 5.54
266 267 4.194720 CGACGAAGAGGCCCTCCG 62.195 72.222 7.26 7.53 37.47 4.63
267 268 4.516195 GCGACGAAGAGGCCCTCC 62.516 72.222 7.26 0.00 0.00 4.30
268 269 4.856607 CGCGACGAAGAGGCCCTC 62.857 72.222 1.26 1.26 0.00 4.30
272 273 4.856607 CTCCCGCGACGAAGAGGC 62.857 72.222 8.23 0.00 0.00 4.70
273 274 4.194720 CCTCCCGCGACGAAGAGG 62.195 72.222 8.23 11.07 39.44 3.69
274 275 4.194720 CCCTCCCGCGACGAAGAG 62.195 72.222 8.23 5.38 0.00 2.85
301 302 1.543941 GATCTTGCAGATCCGCGTCG 61.544 60.000 4.92 0.00 44.08 5.12
302 303 2.220761 GATCTTGCAGATCCGCGTC 58.779 57.895 4.92 0.00 44.08 5.19
303 304 4.427394 GATCTTGCAGATCCGCGT 57.573 55.556 4.92 0.00 44.08 6.01
320 321 3.977244 GTTGGGCGCCAAGTGTGG 61.977 66.667 30.85 0.00 44.82 4.17
321 322 2.906897 AGTTGGGCGCCAAGTGTG 60.907 61.111 30.85 0.00 44.82 3.82
322 323 2.594592 GAGTTGGGCGCCAAGTGT 60.595 61.111 30.85 8.17 45.97 3.55
323 324 2.594303 TGAGTTGGGCGCCAAGTG 60.594 61.111 30.85 0.00 45.97 3.16
325 326 3.741476 GCTGAGTTGGGCGCCAAG 61.741 66.667 30.85 15.55 44.82 3.61
331 332 1.285950 GGTTTTCGCTGAGTTGGGC 59.714 57.895 0.00 0.00 0.00 5.36
332 333 1.200020 GATGGTTTTCGCTGAGTTGGG 59.800 52.381 0.00 0.00 0.00 4.12
333 334 1.135972 CGATGGTTTTCGCTGAGTTGG 60.136 52.381 0.00 0.00 31.60 3.77
334 335 1.798223 TCGATGGTTTTCGCTGAGTTG 59.202 47.619 0.00 0.00 38.97 3.16
335 336 2.163818 TCGATGGTTTTCGCTGAGTT 57.836 45.000 0.00 0.00 38.97 3.01
336 337 2.386661 ATCGATGGTTTTCGCTGAGT 57.613 45.000 0.00 0.00 38.97 3.41
337 338 2.223112 CCAATCGATGGTTTTCGCTGAG 60.223 50.000 0.00 0.00 44.85 3.35
338 339 1.737236 CCAATCGATGGTTTTCGCTGA 59.263 47.619 0.00 0.00 44.85 4.26
339 340 2.178474 CCAATCGATGGTTTTCGCTG 57.822 50.000 0.00 0.00 44.85 5.18
350 351 8.924511 ATATTGAAAACCTACATCCAATCGAT 57.075 30.769 0.00 0.00 0.00 3.59
351 352 7.170828 CGATATTGAAAACCTACATCCAATCGA 59.829 37.037 0.00 0.00 0.00 3.59
352 353 7.290842 CGATATTGAAAACCTACATCCAATCG 58.709 38.462 0.00 0.00 0.00 3.34
353 354 7.444183 TCCGATATTGAAAACCTACATCCAATC 59.556 37.037 0.00 0.00 0.00 2.67
354 355 7.287061 TCCGATATTGAAAACCTACATCCAAT 58.713 34.615 0.00 0.00 0.00 3.16
355 356 6.654959 TCCGATATTGAAAACCTACATCCAA 58.345 36.000 0.00 0.00 0.00 3.53
356 357 6.241882 TCCGATATTGAAAACCTACATCCA 57.758 37.500 0.00 0.00 0.00 3.41
357 358 7.066525 TGTTTCCGATATTGAAAACCTACATCC 59.933 37.037 2.64 0.00 33.80 3.51
358 359 7.981142 TGTTTCCGATATTGAAAACCTACATC 58.019 34.615 2.64 0.00 33.80 3.06
359 360 7.931578 TGTTTCCGATATTGAAAACCTACAT 57.068 32.000 2.64 0.00 33.80 2.29
360 361 7.747155 TTGTTTCCGATATTGAAAACCTACA 57.253 32.000 2.64 0.00 33.80 2.74
361 362 9.465985 TTTTTGTTTCCGATATTGAAAACCTAC 57.534 29.630 2.64 0.00 33.80 3.18
385 386 8.934825 CCACATATTTCGATGTTCCAAATTTTT 58.065 29.630 0.00 0.00 37.99 1.94
386 387 8.310382 TCCACATATTTCGATGTTCCAAATTTT 58.690 29.630 0.00 0.00 37.99 1.82
387 388 7.835822 TCCACATATTTCGATGTTCCAAATTT 58.164 30.769 0.00 0.00 37.99 1.82
388 389 7.403312 TCCACATATTTCGATGTTCCAAATT 57.597 32.000 0.00 0.00 37.99 1.82
389 390 7.403312 TTCCACATATTTCGATGTTCCAAAT 57.597 32.000 0.00 0.00 37.99 2.32
390 391 6.825944 TTCCACATATTTCGATGTTCCAAA 57.174 33.333 0.00 0.00 37.99 3.28
391 392 6.825944 TTTCCACATATTTCGATGTTCCAA 57.174 33.333 0.00 0.00 37.99 3.53
392 393 7.339212 AGAATTTCCACATATTTCGATGTTCCA 59.661 33.333 0.00 0.00 37.99 3.53
393 394 7.645340 CAGAATTTCCACATATTTCGATGTTCC 59.355 37.037 0.00 0.00 37.99 3.62
394 395 8.397906 TCAGAATTTCCACATATTTCGATGTTC 58.602 33.333 0.00 0.00 37.99 3.18
395 396 8.279970 TCAGAATTTCCACATATTTCGATGTT 57.720 30.769 0.00 0.00 37.99 2.71
396 397 7.864108 TCAGAATTTCCACATATTTCGATGT 57.136 32.000 0.00 0.00 40.78 3.06
397 398 9.740239 ATTTCAGAATTTCCACATATTTCGATG 57.260 29.630 0.00 0.00 0.00 3.84
412 413 7.973388 TCCGAAATATGCGAAATTTCAGAATTT 59.027 29.630 17.99 15.23 45.62 1.82
413 414 7.479980 TCCGAAATATGCGAAATTTCAGAATT 58.520 30.769 17.99 8.62 41.40 2.17
414 415 7.026631 TCCGAAATATGCGAAATTTCAGAAT 57.973 32.000 17.99 12.36 41.40 2.40
415 416 6.429791 TCCGAAATATGCGAAATTTCAGAA 57.570 33.333 17.99 6.14 41.40 3.02
416 417 6.429791 TTCCGAAATATGCGAAATTTCAGA 57.570 33.333 17.99 3.95 41.40 3.27
417 418 7.684062 ATTTCCGAAATATGCGAAATTTCAG 57.316 32.000 17.99 11.38 41.40 3.02
418 419 9.743057 ATAATTTCCGAAATATGCGAAATTTCA 57.257 25.926 17.99 0.43 41.40 2.69
423 424 8.812329 CCAAAATAATTTCCGAAATATGCGAAA 58.188 29.630 6.79 0.00 0.00 3.46
424 425 8.191446 TCCAAAATAATTTCCGAAATATGCGAA 58.809 29.630 6.79 0.00 0.00 4.70
425 426 7.708051 TCCAAAATAATTTCCGAAATATGCGA 58.292 30.769 6.79 0.00 0.00 5.10
426 427 7.922505 TCCAAAATAATTTCCGAAATATGCG 57.077 32.000 6.79 0.00 0.00 4.73
432 433 9.988815 TCTCAAAATCCAAAATAATTTCCGAAA 57.011 25.926 0.00 0.00 0.00 3.46
466 467 9.990360 GGTTAAACTCCTCCAAATTAAATGAAA 57.010 29.630 0.00 0.00 0.00 2.69
467 468 9.374711 AGGTTAAACTCCTCCAAATTAAATGAA 57.625 29.630 0.00 0.00 0.00 2.57
468 469 8.950007 AGGTTAAACTCCTCCAAATTAAATGA 57.050 30.769 0.00 0.00 0.00 2.57
472 473 9.470399 GGATTAGGTTAAACTCCTCCAAATTAA 57.530 33.333 13.79 0.00 36.60 1.40
473 474 8.616598 TGGATTAGGTTAAACTCCTCCAAATTA 58.383 33.333 17.46 0.00 36.60 1.40
474 475 7.475299 TGGATTAGGTTAAACTCCTCCAAATT 58.525 34.615 17.46 0.00 36.60 1.82
475 476 7.039722 TGGATTAGGTTAAACTCCTCCAAAT 57.960 36.000 17.46 3.15 36.60 2.32
476 477 6.457159 TGGATTAGGTTAAACTCCTCCAAA 57.543 37.500 17.46 0.00 36.60 3.28
477 478 6.457159 TTGGATTAGGTTAAACTCCTCCAA 57.543 37.500 23.30 23.30 38.13 3.53
478 479 6.457159 TTTGGATTAGGTTAAACTCCTCCA 57.543 37.500 16.34 16.34 36.60 3.86
479 480 7.956328 AATTTGGATTAGGTTAAACTCCTCC 57.044 36.000 12.37 12.37 36.60 4.30
508 509 9.748708 CCTCAAGACAGATTCAAACAAATTTAA 57.251 29.630 0.00 0.00 0.00 1.52
509 510 8.912988 ACCTCAAGACAGATTCAAACAAATTTA 58.087 29.630 0.00 0.00 0.00 1.40
510 511 7.785033 ACCTCAAGACAGATTCAAACAAATTT 58.215 30.769 0.00 0.00 0.00 1.82
511 512 7.352079 ACCTCAAGACAGATTCAAACAAATT 57.648 32.000 0.00 0.00 0.00 1.82
512 513 6.966534 ACCTCAAGACAGATTCAAACAAAT 57.033 33.333 0.00 0.00 0.00 2.32
513 514 6.773976 AACCTCAAGACAGATTCAAACAAA 57.226 33.333 0.00 0.00 0.00 2.83
514 515 6.773976 AAACCTCAAGACAGATTCAAACAA 57.226 33.333 0.00 0.00 0.00 2.83
515 516 6.405731 CCAAAACCTCAAGACAGATTCAAACA 60.406 38.462 0.00 0.00 0.00 2.83
516 517 5.979517 CCAAAACCTCAAGACAGATTCAAAC 59.020 40.000 0.00 0.00 0.00 2.93
517 518 5.656416 ACCAAAACCTCAAGACAGATTCAAA 59.344 36.000 0.00 0.00 0.00 2.69
518 519 5.200483 ACCAAAACCTCAAGACAGATTCAA 58.800 37.500 0.00 0.00 0.00 2.69
519 520 4.792068 ACCAAAACCTCAAGACAGATTCA 58.208 39.130 0.00 0.00 0.00 2.57
520 521 5.998363 ACTACCAAAACCTCAAGACAGATTC 59.002 40.000 0.00 0.00 0.00 2.52
521 522 5.941788 ACTACCAAAACCTCAAGACAGATT 58.058 37.500 0.00 0.00 0.00 2.40
522 523 5.568620 ACTACCAAAACCTCAAGACAGAT 57.431 39.130 0.00 0.00 0.00 2.90
523 524 6.681729 ATACTACCAAAACCTCAAGACAGA 57.318 37.500 0.00 0.00 0.00 3.41
524 525 6.348540 GCAATACTACCAAAACCTCAAGACAG 60.349 42.308 0.00 0.00 0.00 3.51
525 526 5.472137 GCAATACTACCAAAACCTCAAGACA 59.528 40.000 0.00 0.00 0.00 3.41
526 527 5.472137 TGCAATACTACCAAAACCTCAAGAC 59.528 40.000 0.00 0.00 0.00 3.01
527 528 5.626142 TGCAATACTACCAAAACCTCAAGA 58.374 37.500 0.00 0.00 0.00 3.02
528 529 5.957842 TGCAATACTACCAAAACCTCAAG 57.042 39.130 0.00 0.00 0.00 3.02
529 530 9.860650 ATATATGCAATACTACCAAAACCTCAA 57.139 29.630 0.00 0.00 0.00 3.02
530 531 9.860650 AATATATGCAATACTACCAAAACCTCA 57.139 29.630 0.00 0.00 0.00 3.86
539 540 9.893305 GGTGTTTGAAATATATGCAATACTACC 57.107 33.333 0.00 0.00 0.00 3.18
543 544 9.964303 TGATGGTGTTTGAAATATATGCAATAC 57.036 29.630 0.00 5.57 0.00 1.89
545 546 9.887629 TTTGATGGTGTTTGAAATATATGCAAT 57.112 25.926 0.00 0.00 0.00 3.56
546 547 9.716531 TTTTGATGGTGTTTGAAATATATGCAA 57.283 25.926 0.00 0.00 0.00 4.08
547 548 9.887629 ATTTTGATGGTGTTTGAAATATATGCA 57.112 25.926 0.00 0.00 0.00 3.96
552 553 9.033481 CGCATATTTTGATGGTGTTTGAAATAT 57.967 29.630 0.00 0.00 32.74 1.28
553 554 8.246871 TCGCATATTTTGATGGTGTTTGAAATA 58.753 29.630 0.00 0.00 0.00 1.40
554 555 7.095910 TCGCATATTTTGATGGTGTTTGAAAT 58.904 30.769 0.00 0.00 0.00 2.17
555 556 6.450545 TCGCATATTTTGATGGTGTTTGAAA 58.549 32.000 0.00 0.00 0.00 2.69
556 557 6.018589 TCGCATATTTTGATGGTGTTTGAA 57.981 33.333 0.00 0.00 0.00 2.69
557 558 5.635417 TCGCATATTTTGATGGTGTTTGA 57.365 34.783 0.00 0.00 0.00 2.69
558 559 6.702972 TTTCGCATATTTTGATGGTGTTTG 57.297 33.333 0.00 0.00 0.00 2.93
559 560 7.903995 AATTTCGCATATTTTGATGGTGTTT 57.096 28.000 0.00 0.00 0.00 2.83
560 561 7.148440 CCAAATTTCGCATATTTTGATGGTGTT 60.148 33.333 0.00 0.00 32.17 3.32
561 562 6.313411 CCAAATTTCGCATATTTTGATGGTGT 59.687 34.615 0.00 0.00 32.17 4.16
562 563 6.534436 TCCAAATTTCGCATATTTTGATGGTG 59.466 34.615 0.00 0.00 32.17 4.17
563 564 6.638610 TCCAAATTTCGCATATTTTGATGGT 58.361 32.000 0.00 0.00 32.17 3.55
564 565 7.536895 TTCCAAATTTCGCATATTTTGATGG 57.463 32.000 0.00 0.00 32.17 3.51
565 566 9.264782 GTTTTCCAAATTTCGCATATTTTGATG 57.735 29.630 0.00 0.00 32.17 3.07
566 567 9.218440 AGTTTTCCAAATTTCGCATATTTTGAT 57.782 25.926 0.00 0.00 32.17 2.57
567 568 8.600449 AGTTTTCCAAATTTCGCATATTTTGA 57.400 26.923 0.00 0.00 32.17 2.69
568 569 9.662545 AAAGTTTTCCAAATTTCGCATATTTTG 57.337 25.926 0.00 0.00 0.00 2.44
573 574 9.698309 TCAATAAAGTTTTCCAAATTTCGCATA 57.302 25.926 0.00 0.00 32.55 3.14
574 575 8.600449 TCAATAAAGTTTTCCAAATTTCGCAT 57.400 26.923 0.00 0.00 32.55 4.73
575 576 8.425577 TTCAATAAAGTTTTCCAAATTTCGCA 57.574 26.923 0.00 0.00 32.55 5.10
576 577 9.877137 AATTCAATAAAGTTTTCCAAATTTCGC 57.123 25.926 0.00 0.00 32.55 4.70
602 603 4.547671 TGGTCCACAATCAGGGTTAAAAA 58.452 39.130 0.00 0.00 0.00 1.94
603 604 4.186077 TGGTCCACAATCAGGGTTAAAA 57.814 40.909 0.00 0.00 0.00 1.52
604 605 3.885976 TGGTCCACAATCAGGGTTAAA 57.114 42.857 0.00 0.00 0.00 1.52
605 606 3.075283 ACATGGTCCACAATCAGGGTTAA 59.925 43.478 0.00 0.00 0.00 2.01
606 607 2.647299 ACATGGTCCACAATCAGGGTTA 59.353 45.455 0.00 0.00 0.00 2.85
607 608 1.428912 ACATGGTCCACAATCAGGGTT 59.571 47.619 0.00 0.00 0.00 4.11
608 609 1.075601 ACATGGTCCACAATCAGGGT 58.924 50.000 0.00 0.00 0.00 4.34
609 610 2.923121 CTACATGGTCCACAATCAGGG 58.077 52.381 0.00 0.00 0.00 4.45
610 611 2.292267 GCTACATGGTCCACAATCAGG 58.708 52.381 0.00 0.00 0.00 3.86
611 612 2.292267 GGCTACATGGTCCACAATCAG 58.708 52.381 0.00 0.00 0.00 2.90
612 613 1.064758 GGGCTACATGGTCCACAATCA 60.065 52.381 0.00 0.00 0.00 2.57
613 614 1.064758 TGGGCTACATGGTCCACAATC 60.065 52.381 0.00 0.00 35.90 2.67
614 615 0.998928 TGGGCTACATGGTCCACAAT 59.001 50.000 0.00 0.00 35.90 2.71
615 616 0.327924 CTGGGCTACATGGTCCACAA 59.672 55.000 0.00 0.00 35.90 3.33
616 617 1.990424 CTGGGCTACATGGTCCACA 59.010 57.895 0.00 0.00 35.90 4.17
617 618 1.452108 GCTGGGCTACATGGTCCAC 60.452 63.158 0.00 0.00 35.90 4.02
618 619 1.616327 AGCTGGGCTACATGGTCCA 60.616 57.895 0.00 0.00 36.99 4.02
619 620 1.153086 CAGCTGGGCTACATGGTCC 60.153 63.158 5.57 0.00 36.40 4.46
620 621 0.471617 ATCAGCTGGGCTACATGGTC 59.528 55.000 15.13 0.00 36.40 4.02
621 622 1.806496 TATCAGCTGGGCTACATGGT 58.194 50.000 15.13 0.00 36.40 3.55
622 623 2.498167 GTTATCAGCTGGGCTACATGG 58.502 52.381 15.13 0.00 36.40 3.66
623 624 2.105477 AGGTTATCAGCTGGGCTACATG 59.895 50.000 15.13 0.00 36.40 3.21
624 625 2.370189 GAGGTTATCAGCTGGGCTACAT 59.630 50.000 15.13 5.01 36.40 2.29
625 626 1.762957 GAGGTTATCAGCTGGGCTACA 59.237 52.381 15.13 0.00 36.40 2.74
626 627 1.269831 CGAGGTTATCAGCTGGGCTAC 60.270 57.143 15.13 7.21 36.40 3.58
627 628 1.040646 CGAGGTTATCAGCTGGGCTA 58.959 55.000 15.13 0.54 36.40 3.93
688 704 2.276116 GGCTCCGGTCTGTCTCACA 61.276 63.158 0.00 0.00 0.00 3.58
852 912 2.143925 GAACAAGAAGGTGGGAACTCG 58.856 52.381 0.00 0.00 0.00 4.18
888 948 4.100189 TGAATAGTGAAAGAGCTCCTAGCC 59.900 45.833 10.93 0.00 43.77 3.93
924 984 4.583073 TGCACTTGACTTGAGAGTAGTACA 59.417 41.667 2.52 0.00 35.88 2.90
926 986 5.773575 CTTGCACTTGACTTGAGAGTAGTA 58.226 41.667 0.00 0.00 35.88 1.82
927 987 4.626042 CTTGCACTTGACTTGAGAGTAGT 58.374 43.478 0.00 0.00 35.88 2.73
928 988 3.431572 GCTTGCACTTGACTTGAGAGTAG 59.568 47.826 0.00 0.00 35.88 2.57
954 1018 8.378565 AGGTGGTTTATATACGAGCTAGTAGTA 58.621 37.037 12.39 5.53 33.68 1.82
955 1019 7.230027 AGGTGGTTTATATACGAGCTAGTAGT 58.770 38.462 12.39 6.41 33.68 2.73
956 1020 7.148272 GGAGGTGGTTTATATACGAGCTAGTAG 60.148 44.444 12.39 0.00 35.23 2.57
974 1038 2.689573 TAGCAGGTGGTGGAGGTGGT 62.690 60.000 0.00 0.00 0.00 4.16
975 1039 1.903877 CTAGCAGGTGGTGGAGGTGG 61.904 65.000 0.00 0.00 0.00 4.61
976 1040 1.599047 CTAGCAGGTGGTGGAGGTG 59.401 63.158 0.00 0.00 0.00 4.00
1137 1213 2.046217 GGCTTGTTCCTCGACCCC 60.046 66.667 0.00 0.00 0.00 4.95
1872 1963 1.134530 GGTGATGACTCGAACTCGCG 61.135 60.000 0.00 0.00 39.60 5.87
1951 2049 3.369546 AAAAGATGTTGCCAAGAACGG 57.630 42.857 0.00 0.00 0.00 4.44
1960 2058 3.092334 ACGAACCCAAAAAGATGTTGC 57.908 42.857 0.00 0.00 0.00 4.17
2022 2131 3.256620 CATGTACTGCTCGATCGCA 57.743 52.632 11.09 2.28 38.40 5.10
2037 2146 2.478370 CGCTACCAGAAACCATTGCATG 60.478 50.000 0.00 0.00 0.00 4.06
2068 2178 1.002134 CGGAACCACCTGCCATCTT 60.002 57.895 0.00 0.00 36.31 2.40
2069 2179 1.488705 TTCGGAACCACCTGCCATCT 61.489 55.000 0.00 0.00 36.31 2.90
2097 2207 5.032863 CGTTCATTCTCAATTTCTCATGCC 58.967 41.667 0.00 0.00 0.00 4.40
2101 2211 6.172630 TCCATCGTTCATTCTCAATTTCTCA 58.827 36.000 0.00 0.00 0.00 3.27
2102 2212 6.668541 TCCATCGTTCATTCTCAATTTCTC 57.331 37.500 0.00 0.00 0.00 2.87
2103 2213 6.825213 TCATCCATCGTTCATTCTCAATTTCT 59.175 34.615 0.00 0.00 0.00 2.52
2104 2214 7.019774 TCATCCATCGTTCATTCTCAATTTC 57.980 36.000 0.00 0.00 0.00 2.17
2105 2215 7.283807 TCATCATCCATCGTTCATTCTCAATTT 59.716 33.333 0.00 0.00 0.00 1.82
2106 2216 6.769341 TCATCATCCATCGTTCATTCTCAATT 59.231 34.615 0.00 0.00 0.00 2.32
2107 2217 6.293698 TCATCATCCATCGTTCATTCTCAAT 58.706 36.000 0.00 0.00 0.00 2.57
2108 2218 5.673514 TCATCATCCATCGTTCATTCTCAA 58.326 37.500 0.00 0.00 0.00 3.02
2122 2232 9.197306 AGATTCAAAGAATTCAATCATCATCCA 57.803 29.630 8.44 0.00 32.49 3.41
2140 2250 9.984190 TCAACAATGATTCATCAAAGATTCAAA 57.016 25.926 0.00 0.00 40.69 2.69
2141 2251 9.634163 CTCAACAATGATTCATCAAAGATTCAA 57.366 29.630 0.00 0.00 40.69 2.69
2142 2252 7.758076 GCTCAACAATGATTCATCAAAGATTCA 59.242 33.333 0.00 0.00 40.69 2.57
2143 2253 7.044249 CGCTCAACAATGATTCATCAAAGATTC 60.044 37.037 0.00 0.00 40.69 2.52
2144 2254 6.750501 CGCTCAACAATGATTCATCAAAGATT 59.249 34.615 0.00 0.00 40.69 2.40
2145 2255 6.263344 CGCTCAACAATGATTCATCAAAGAT 58.737 36.000 0.00 0.00 40.69 2.40
2146 2256 5.392272 CCGCTCAACAATGATTCATCAAAGA 60.392 40.000 0.00 0.00 40.69 2.52
2169 2279 3.357166 AGCGTTCGATCTCTGTATTCC 57.643 47.619 0.00 0.00 0.00 3.01
2175 2285 3.000277 GTGATCAAAGCGTTCGATCTCTG 60.000 47.826 18.02 0.00 37.14 3.35
2207 2317 4.162651 AGTAAAAAGGAACGGAGGGAGTA 58.837 43.478 0.00 0.00 0.00 2.59
2208 2318 2.977580 AGTAAAAAGGAACGGAGGGAGT 59.022 45.455 0.00 0.00 0.00 3.85
2209 2319 3.261137 AGAGTAAAAAGGAACGGAGGGAG 59.739 47.826 0.00 0.00 0.00 4.30
2210 2320 3.007614 CAGAGTAAAAAGGAACGGAGGGA 59.992 47.826 0.00 0.00 0.00 4.20
2211 2321 3.335579 CAGAGTAAAAAGGAACGGAGGG 58.664 50.000 0.00 0.00 0.00 4.30
2212 2322 2.742589 GCAGAGTAAAAAGGAACGGAGG 59.257 50.000 0.00 0.00 0.00 4.30
2213 2323 2.412089 CGCAGAGTAAAAAGGAACGGAG 59.588 50.000 0.00 0.00 0.00 4.63
2214 2324 2.224113 ACGCAGAGTAAAAAGGAACGGA 60.224 45.455 0.00 0.00 0.00 4.69
2215 2325 2.140717 ACGCAGAGTAAAAAGGAACGG 58.859 47.619 0.00 0.00 0.00 4.44
2216 2326 3.737266 TGTACGCAGAGTAAAAAGGAACG 59.263 43.478 0.00 0.00 37.02 3.95
2217 2327 5.235831 ACTTGTACGCAGAGTAAAAAGGAAC 59.764 40.000 10.77 0.00 36.41 3.62
2218 2328 5.362263 ACTTGTACGCAGAGTAAAAAGGAA 58.638 37.500 10.77 0.00 36.41 3.36
2219 2329 4.952460 ACTTGTACGCAGAGTAAAAAGGA 58.048 39.130 10.77 0.00 36.41 3.36
2220 2330 5.668558 AACTTGTACGCAGAGTAAAAAGG 57.331 39.130 10.77 0.00 36.41 3.11
2221 2331 6.413818 CCAAAACTTGTACGCAGAGTAAAAAG 59.586 38.462 6.51 6.51 37.02 2.27
2222 2332 6.127952 ACCAAAACTTGTACGCAGAGTAAAAA 60.128 34.615 0.00 0.00 37.02 1.94
2223 2333 5.354792 ACCAAAACTTGTACGCAGAGTAAAA 59.645 36.000 0.00 0.00 37.02 1.52
2224 2334 4.877251 ACCAAAACTTGTACGCAGAGTAAA 59.123 37.500 0.00 0.00 37.02 2.01
2225 2335 4.444536 ACCAAAACTTGTACGCAGAGTAA 58.555 39.130 0.00 0.00 37.02 2.24
2226 2336 4.053295 GACCAAAACTTGTACGCAGAGTA 58.947 43.478 0.00 0.00 0.00 2.59
2227 2337 2.870411 GACCAAAACTTGTACGCAGAGT 59.130 45.455 0.00 0.00 0.00 3.24
2228 2338 2.869801 TGACCAAAACTTGTACGCAGAG 59.130 45.455 0.00 0.00 0.00 3.35
2229 2339 2.907634 TGACCAAAACTTGTACGCAGA 58.092 42.857 0.00 0.00 0.00 4.26
2230 2340 3.684103 TTGACCAAAACTTGTACGCAG 57.316 42.857 0.00 0.00 0.00 5.18
2231 2341 3.440872 ACTTTGACCAAAACTTGTACGCA 59.559 39.130 0.00 0.00 0.00 5.24
2232 2342 4.023739 ACTTTGACCAAAACTTGTACGC 57.976 40.909 0.00 0.00 0.00 4.42
2233 2343 5.224562 TGACTTTGACCAAAACTTGTACG 57.775 39.130 0.00 0.00 0.00 3.67
2234 2344 7.088272 AGTTTGACTTTGACCAAAACTTGTAC 58.912 34.615 0.00 0.00 34.52 2.90
2235 2345 7.222000 AGTTTGACTTTGACCAAAACTTGTA 57.778 32.000 0.00 0.00 34.52 2.41
2236 2346 6.096673 AGTTTGACTTTGACCAAAACTTGT 57.903 33.333 0.00 0.00 34.52 3.16
2237 2347 6.250527 CGTAGTTTGACTTTGACCAAAACTTG 59.749 38.462 4.61 0.00 34.52 3.16
2238 2348 6.319399 CGTAGTTTGACTTTGACCAAAACTT 58.681 36.000 4.61 0.00 34.52 2.66
2239 2349 5.675323 GCGTAGTTTGACTTTGACCAAAACT 60.675 40.000 4.69 4.69 34.52 2.66
2240 2350 4.497966 GCGTAGTTTGACTTTGACCAAAAC 59.502 41.667 0.00 0.00 34.52 2.43
2241 2351 4.156190 TGCGTAGTTTGACTTTGACCAAAA 59.844 37.500 0.00 0.00 34.52 2.44
2242 2352 3.690139 TGCGTAGTTTGACTTTGACCAAA 59.310 39.130 0.00 0.00 0.00 3.28
2243 2353 3.271729 TGCGTAGTTTGACTTTGACCAA 58.728 40.909 0.00 0.00 0.00 3.67
2244 2354 2.907634 TGCGTAGTTTGACTTTGACCA 58.092 42.857 0.00 0.00 0.00 4.02
2245 2355 3.955771 TTGCGTAGTTTGACTTTGACC 57.044 42.857 0.00 0.00 0.00 4.02
2246 2356 6.806120 AATTTTGCGTAGTTTGACTTTGAC 57.194 33.333 0.00 0.00 0.00 3.18
2247 2357 7.030165 TCAAATTTTGCGTAGTTTGACTTTGA 58.970 30.769 4.19 0.00 36.11 2.69
2248 2358 7.215696 TCAAATTTTGCGTAGTTTGACTTTG 57.784 32.000 4.19 0.00 36.11 2.77
2253 2363 5.158101 TCGTCAAATTTTGCGTAGTTTGA 57.842 34.783 18.50 4.99 38.01 2.69
2254 2364 5.858159 TTCGTCAAATTTTGCGTAGTTTG 57.142 34.783 18.50 0.00 33.85 2.93
2255 2365 7.458038 AATTTCGTCAAATTTTGCGTAGTTT 57.542 28.000 18.50 9.38 38.83 2.66
2256 2366 7.458038 AAATTTCGTCAAATTTTGCGTAGTT 57.542 28.000 18.50 12.67 45.93 2.24
2257 2367 8.736751 ATAAATTTCGTCAAATTTTGCGTAGT 57.263 26.923 18.50 8.97 45.93 2.73
2319 2429 9.677567 GCACCACGAAATGTATTTTTATATCAT 57.322 29.630 0.00 0.00 0.00 2.45
2320 2430 8.678199 TGCACCACGAAATGTATTTTTATATCA 58.322 29.630 0.00 0.00 0.00 2.15
2321 2431 9.677567 ATGCACCACGAAATGTATTTTTATATC 57.322 29.630 0.00 0.00 0.00 1.63
2322 2432 9.677567 GATGCACCACGAAATGTATTTTTATAT 57.322 29.630 0.00 0.00 0.00 0.86
2323 2433 8.898761 AGATGCACCACGAAATGTATTTTTATA 58.101 29.630 0.00 0.00 0.00 0.98
2324 2434 7.771183 AGATGCACCACGAAATGTATTTTTAT 58.229 30.769 0.00 0.00 0.00 1.40
2325 2435 7.151999 AGATGCACCACGAAATGTATTTTTA 57.848 32.000 0.00 0.00 0.00 1.52
2326 2436 6.024552 AGATGCACCACGAAATGTATTTTT 57.975 33.333 0.00 0.00 0.00 1.94
2327 2437 5.643379 AGATGCACCACGAAATGTATTTT 57.357 34.783 0.00 0.00 0.00 1.82
2328 2438 6.751514 TTAGATGCACCACGAAATGTATTT 57.248 33.333 0.00 0.00 0.00 1.40
2329 2439 6.751514 TTTAGATGCACCACGAAATGTATT 57.248 33.333 0.00 0.00 0.00 1.89
2330 2440 6.751514 TTTTAGATGCACCACGAAATGTAT 57.248 33.333 0.00 0.00 0.00 2.29
2331 2441 6.561737 TTTTTAGATGCACCACGAAATGTA 57.438 33.333 0.00 0.00 0.00 2.29
2332 2442 5.446143 TTTTTAGATGCACCACGAAATGT 57.554 34.783 0.00 0.00 0.00 2.71
2333 2443 5.863397 ACATTTTTAGATGCACCACGAAATG 59.137 36.000 17.87 17.87 38.51 2.32
2334 2444 6.024552 ACATTTTTAGATGCACCACGAAAT 57.975 33.333 0.00 0.00 0.00 2.17
2335 2445 5.446143 ACATTTTTAGATGCACCACGAAA 57.554 34.783 0.00 0.00 0.00 3.46
2336 2446 5.009110 TCAACATTTTTAGATGCACCACGAA 59.991 36.000 0.00 0.00 0.00 3.85
2337 2447 4.517075 TCAACATTTTTAGATGCACCACGA 59.483 37.500 0.00 0.00 0.00 4.35
2338 2448 4.793071 TCAACATTTTTAGATGCACCACG 58.207 39.130 0.00 0.00 0.00 4.94
2339 2449 7.410728 CGAAATCAACATTTTTAGATGCACCAC 60.411 37.037 0.00 0.00 31.94 4.16
2340 2450 6.585702 CGAAATCAACATTTTTAGATGCACCA 59.414 34.615 0.00 0.00 31.94 4.17
2341 2451 6.586082 ACGAAATCAACATTTTTAGATGCACC 59.414 34.615 0.00 0.00 31.94 5.01
2342 2452 7.566858 ACGAAATCAACATTTTTAGATGCAC 57.433 32.000 0.00 0.00 31.94 4.57
2343 2453 9.853555 AATACGAAATCAACATTTTTAGATGCA 57.146 25.926 0.00 0.00 31.94 3.96
2394 2504 8.981647 CAAGCTTTGCATAGTTTGATTAACTTT 58.018 29.630 22.96 0.00 44.73 2.66
2395 2505 8.359642 TCAAGCTTTGCATAGTTTGATTAACTT 58.640 29.630 24.94 7.07 44.73 2.66
2397 2507 7.809806 AGTCAAGCTTTGCATAGTTTGATTAAC 59.190 33.333 28.92 20.20 43.88 2.01
2398 2508 7.885297 AGTCAAGCTTTGCATAGTTTGATTAA 58.115 30.769 28.92 12.20 43.88 1.40
2399 2509 7.452880 AGTCAAGCTTTGCATAGTTTGATTA 57.547 32.000 28.92 12.49 43.88 1.75
2400 2510 6.336842 AGTCAAGCTTTGCATAGTTTGATT 57.663 33.333 28.92 24.35 43.88 2.57
2401 2511 5.972107 AGTCAAGCTTTGCATAGTTTGAT 57.028 34.783 28.92 19.00 43.88 2.57
2402 2512 5.772825 AAGTCAAGCTTTGCATAGTTTGA 57.227 34.783 24.94 24.94 41.24 2.69
2414 2524 9.740710 ATATAAGGTTTAGTCAAAGTCAAGCTT 57.259 29.630 0.00 0.00 38.41 3.74
2415 2525 9.167311 CATATAAGGTTTAGTCAAAGTCAAGCT 57.833 33.333 0.00 0.00 0.00 3.74
2416 2526 7.910683 GCATATAAGGTTTAGTCAAAGTCAAGC 59.089 37.037 0.00 0.00 0.00 4.01
2417 2527 8.946085 TGCATATAAGGTTTAGTCAAAGTCAAG 58.054 33.333 0.00 0.00 0.00 3.02
2418 2528 8.856153 TGCATATAAGGTTTAGTCAAAGTCAA 57.144 30.769 0.00 0.00 0.00 3.18
2419 2529 8.318412 TCTGCATATAAGGTTTAGTCAAAGTCA 58.682 33.333 0.00 0.00 0.00 3.41
2420 2530 8.604890 GTCTGCATATAAGGTTTAGTCAAAGTC 58.395 37.037 0.00 0.00 0.00 3.01
2421 2531 8.322091 AGTCTGCATATAAGGTTTAGTCAAAGT 58.678 33.333 0.00 0.00 0.00 2.66
2422 2532 8.723942 AGTCTGCATATAAGGTTTAGTCAAAG 57.276 34.615 0.00 0.00 0.00 2.77
2452 2562 2.632987 ACTGTACTGCCTCCGTTTTT 57.367 45.000 0.00 0.00 0.00 1.94
2453 2563 2.631545 AGTACTGTACTGCCTCCGTTTT 59.368 45.455 19.09 0.00 37.69 2.43
2454 2564 2.245582 AGTACTGTACTGCCTCCGTTT 58.754 47.619 19.09 0.00 37.69 3.60
2455 2565 1.920610 AGTACTGTACTGCCTCCGTT 58.079 50.000 19.09 0.00 37.69 4.44
2456 2566 2.363683 GTAGTACTGTACTGCCTCCGT 58.636 52.381 26.45 4.33 39.81 4.69
2457 2567 1.329906 CGTAGTACTGTACTGCCTCCG 59.670 57.143 26.45 16.80 39.81 4.63
2458 2568 1.065251 GCGTAGTACTGTACTGCCTCC 59.935 57.143 26.45 13.27 39.81 4.30
2459 2569 1.741706 TGCGTAGTACTGTACTGCCTC 59.258 52.381 26.45 18.63 39.81 4.70
2460 2570 1.743958 CTGCGTAGTACTGTACTGCCT 59.256 52.381 26.45 6.69 39.81 4.75
2461 2571 1.741706 TCTGCGTAGTACTGTACTGCC 59.258 52.381 26.45 19.08 39.81 4.85
2462 2572 2.477525 GGTCTGCGTAGTACTGTACTGC 60.478 54.545 26.45 23.90 39.81 4.40
2463 2573 2.097142 GGGTCTGCGTAGTACTGTACTG 59.903 54.545 26.45 14.19 39.81 2.74
2464 2574 2.290514 TGGGTCTGCGTAGTACTGTACT 60.291 50.000 22.72 22.72 42.68 2.73
2465 2575 2.086869 TGGGTCTGCGTAGTACTGTAC 58.913 52.381 9.93 9.93 0.00 2.90
2466 2576 2.495155 TGGGTCTGCGTAGTACTGTA 57.505 50.000 5.39 0.00 0.00 2.74
2467 2577 1.544691 CTTGGGTCTGCGTAGTACTGT 59.455 52.381 5.39 0.00 0.00 3.55
2468 2578 1.544691 ACTTGGGTCTGCGTAGTACTG 59.455 52.381 5.39 0.00 0.00 2.74
2469 2579 1.544691 CACTTGGGTCTGCGTAGTACT 59.455 52.381 0.00 0.00 0.00 2.73
2470 2580 1.271656 ACACTTGGGTCTGCGTAGTAC 59.728 52.381 0.00 0.00 0.00 2.73
2471 2581 1.271379 CACACTTGGGTCTGCGTAGTA 59.729 52.381 0.00 0.00 0.00 1.82
2472 2582 0.033504 CACACTTGGGTCTGCGTAGT 59.966 55.000 0.00 0.00 0.00 2.73
2473 2583 0.317160 TCACACTTGGGTCTGCGTAG 59.683 55.000 0.00 0.00 0.00 3.51
2487 2597 5.391312 AATCCAGTGGCTTTATTTCACAC 57.609 39.130 3.51 0.00 34.17 3.82
2642 2783 0.036765 AAAATACGTCCAGCCGCAGA 60.037 50.000 0.00 0.00 0.00 4.26
2744 2885 2.492484 ACTAGCAGTAGCAGTACCACAC 59.508 50.000 0.00 0.00 45.49 3.82
2753 2894 0.454600 GCACCGTACTAGCAGTAGCA 59.545 55.000 0.00 0.00 45.49 3.49
2754 2895 0.248949 GGCACCGTACTAGCAGTAGC 60.249 60.000 0.00 0.00 42.56 3.58
2755 2896 0.384669 GGGCACCGTACTAGCAGTAG 59.615 60.000 0.00 0.00 40.86 2.57
2756 2897 2.496942 GGGCACCGTACTAGCAGTA 58.503 57.895 0.00 0.00 40.86 2.74
2757 2898 3.295800 GGGCACCGTACTAGCAGT 58.704 61.111 0.00 0.00 40.86 4.40
2773 2914 2.437359 GCTAGTGTGGCAGCAGGG 60.437 66.667 0.00 0.00 37.73 4.45
2807 2948 2.959484 TTTGCTCCCTCTGCCTCCG 61.959 63.158 0.00 0.00 0.00 4.63
2813 2954 5.491982 ACTACTATTTGTTTGCTCCCTCTG 58.508 41.667 0.00 0.00 0.00 3.35
2835 2976 5.292101 AGAATGCGATTCAAAGTGCTACTAC 59.708 40.000 10.26 0.00 41.71 2.73
2836 2977 5.419542 AGAATGCGATTCAAAGTGCTACTA 58.580 37.500 10.26 0.00 41.71 1.82
2837 2978 4.256920 AGAATGCGATTCAAAGTGCTACT 58.743 39.130 10.26 0.00 41.71 2.57
2838 2979 4.582459 GAGAATGCGATTCAAAGTGCTAC 58.418 43.478 10.26 0.00 41.71 3.58
2887 3030 2.106857 ACCGGTCCATTACACCTTGAAA 59.893 45.455 0.00 0.00 0.00 2.69
2888 3031 1.700739 ACCGGTCCATTACACCTTGAA 59.299 47.619 0.00 0.00 0.00 2.69
2896 3040 1.073177 CGTCACAACCGGTCCATTAC 58.927 55.000 8.04 2.01 0.00 1.89
2897 3041 0.680618 ACGTCACAACCGGTCCATTA 59.319 50.000 8.04 0.00 0.00 1.90
2902 3046 1.589727 ACGAACGTCACAACCGGTC 60.590 57.895 8.04 0.00 38.63 4.79
2904 3048 2.591311 CCACGAACGTCACAACCGG 61.591 63.158 0.00 0.00 0.00 5.28
2907 3051 0.728542 AAACCCACGAACGTCACAAC 59.271 50.000 0.00 0.00 0.00 3.32
2924 3068 5.969423 AGTATTATCGAACGAGTTCCCAAA 58.031 37.500 10.03 3.04 36.27 3.28
2925 3069 5.587388 AGTATTATCGAACGAGTTCCCAA 57.413 39.130 10.03 3.03 36.27 4.12
2926 3070 6.889301 ATAGTATTATCGAACGAGTTCCCA 57.111 37.500 10.03 0.00 36.27 4.37
2927 3071 9.122613 GTTTATAGTATTATCGAACGAGTTCCC 57.877 37.037 10.03 0.00 36.27 3.97
2928 3072 9.122613 GGTTTATAGTATTATCGAACGAGTTCC 57.877 37.037 10.03 0.00 36.27 3.62
2929 3073 9.669353 TGGTTTATAGTATTATCGAACGAGTTC 57.331 33.333 5.93 5.93 36.29 3.01
2946 3091 7.650504 TCCGACAGACGAAATTATGGTTTATAG 59.349 37.037 0.00 0.00 45.77 1.31
2953 3098 3.930229 TGTTCCGACAGACGAAATTATGG 59.070 43.478 0.00 0.00 45.77 2.74
2955 3100 5.005394 CGAATGTTCCGACAGACGAAATTAT 59.995 40.000 0.00 0.00 45.77 1.28
2956 3101 4.325204 CGAATGTTCCGACAGACGAAATTA 59.675 41.667 0.00 0.00 45.77 1.40
2965 3110 2.672714 TCTTGACGAATGTTCCGACAG 58.327 47.619 0.00 0.00 39.58 3.51
2966 3111 2.804697 TCTTGACGAATGTTCCGACA 57.195 45.000 0.00 0.00 40.71 4.35
2967 3112 2.348666 CCATCTTGACGAATGTTCCGAC 59.651 50.000 0.00 0.00 0.00 4.79
2969 3114 1.062587 GCCATCTTGACGAATGTTCCG 59.937 52.381 0.00 0.00 0.00 4.30
2970 3115 1.401905 GGCCATCTTGACGAATGTTCC 59.598 52.381 0.00 0.00 0.00 3.62
2976 3121 0.320374 AACTCGGCCATCTTGACGAA 59.680 50.000 2.24 0.00 34.70 3.85
2977 3122 0.389817 CAACTCGGCCATCTTGACGA 60.390 55.000 2.24 0.00 0.00 4.20


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.