Multiple sequence alignment - TraesCS3B01G546900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G546900 chr3B 100.000 2327 0 0 1 2327 783145554 783147880 0.000000e+00 4298.0
1 TraesCS3B01G546900 chr3B 97.491 279 7 0 538 816 726491493 726491771 5.820000e-131 477.0
2 TraesCS3B01G546900 chr3B 96.797 281 9 0 536 816 328458467 328458747 9.730000e-129 470.0
3 TraesCS3B01G546900 chr3D 90.999 711 49 10 944 1643 586575848 586575142 0.000000e+00 944.0
4 TraesCS3B01G546900 chr3D 86.491 570 42 8 814 1348 586405222 586405791 5.540000e-166 593.0
5 TraesCS3B01G546900 chr3D 86.957 299 31 6 1 293 586576688 586576392 1.720000e-86 329.0
6 TraesCS3B01G546900 chr3D 89.105 257 21 4 1388 1643 586405788 586406038 1.740000e-81 313.0
7 TraesCS3B01G546900 chr3D 97.826 92 2 0 819 910 586576266 586576175 2.390000e-35 159.0
8 TraesCS3B01G546900 chr3D 86.607 112 12 2 435 543 586576377 586576266 1.130000e-23 121.0
9 TraesCS3B01G546900 chr6D 90.625 640 43 10 1703 2327 426298842 426298205 0.000000e+00 833.0
10 TraesCS3B01G546900 chr6D 87.064 487 54 6 1844 2327 69917293 69917773 2.030000e-150 542.0
11 TraesCS3B01G546900 chr6D 93.382 136 9 0 1703 1838 69917059 69917194 3.920000e-48 202.0
12 TraesCS3B01G546900 chr6D 92.969 128 9 0 1713 1840 69837277 69837404 1.100000e-43 187.0
13 TraesCS3B01G546900 chr6B 90.193 622 51 6 1708 2327 641899803 641899190 0.000000e+00 802.0
14 TraesCS3B01G546900 chr6B 85.651 453 55 8 1880 2327 144850134 144850581 3.500000e-128 468.0
15 TraesCS3B01G546900 chr6B 96.154 286 10 1 538 822 637372051 637371766 1.260000e-127 466.0
16 TraesCS3B01G546900 chr6B 90.840 131 11 1 1703 1833 144916343 144916472 8.550000e-40 174.0
17 TraesCS3B01G546900 chr6B 92.473 93 7 0 340 432 484658849 484658941 1.450000e-27 134.0
18 TraesCS3B01G546900 chr7B 86.105 475 58 4 1855 2327 667421039 667420571 2.670000e-139 505.0
19 TraesCS3B01G546900 chr7B 90.816 98 7 1 340 437 113525864 113525959 1.880000e-26 130.0
20 TraesCS3B01G546900 chr7B 89.796 98 10 0 340 437 732591958 732592055 2.430000e-25 126.0
21 TraesCS3B01G546900 chr6A 85.626 487 60 5 1844 2327 87646268 87646747 9.600000e-139 503.0
22 TraesCS3B01G546900 chr6A 97.482 278 7 0 537 814 371732392 371732669 2.090000e-130 475.0
23 TraesCS3B01G546900 chr6A 97.133 279 8 0 538 816 38758093 38757815 2.710000e-129 472.0
24 TraesCS3B01G546900 chr6A 95.862 290 10 2 535 823 2947041 2947329 3.500000e-128 468.0
25 TraesCS3B01G546900 chr6A 86.154 130 17 1 308 437 19178938 19179066 3.120000e-29 139.0
26 TraesCS3B01G546900 chr2A 97.133 279 8 0 540 818 70704028 70704306 2.710000e-129 472.0
27 TraesCS3B01G546900 chr4B 97.122 278 8 0 540 817 662387052 662386775 9.730000e-129 470.0
28 TraesCS3B01G546900 chr7A 96.154 286 10 1 533 818 80600344 80600628 1.260000e-127 466.0
29 TraesCS3B01G546900 chr7A 86.301 146 17 3 1703 1847 547554555 547554412 3.100000e-34 156.0
30 TraesCS3B01G546900 chr7A 92.157 51 4 0 181 231 201368287 201368337 3.210000e-09 73.1
31 TraesCS3B01G546900 chr3A 81.429 490 76 12 1842 2323 684879764 684879282 1.010000e-103 387.0
32 TraesCS3B01G546900 chr3A 91.837 98 8 0 340 437 59443649 59443552 1.120000e-28 137.0
33 TraesCS3B01G546900 chr5D 79.388 490 84 16 1844 2323 369142829 369142347 1.720000e-86 329.0
34 TraesCS3B01G546900 chr5D 88.571 140 16 0 1704 1843 498434364 498434503 1.110000e-38 171.0
35 TraesCS3B01G546900 chr5D 91.837 98 8 0 340 437 6364126 6364223 1.120000e-28 137.0
36 TraesCS3B01G546900 chr5D 91.837 98 8 0 340 437 238777762 238777665 1.120000e-28 137.0
37 TraesCS3B01G546900 chr5B 86.525 141 17 2 1704 1843 78736102 78736241 1.110000e-33 154.0
38 TraesCS3B01G546900 chr2D 86.429 140 18 1 1704 1843 636221931 636221793 4.000000e-33 152.0
39 TraesCS3B01G546900 chr7D 92.857 98 7 0 340 437 88171601 88171698 2.410000e-30 143.0
40 TraesCS3B01G546900 chr2B 91.489 94 8 0 340 433 239629704 239629797 1.880000e-26 130.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G546900 chr3B 783145554 783147880 2326 False 4298.00 4298 100.00000 1 2327 1 chr3B.!!$F3 2326
1 TraesCS3B01G546900 chr3D 586405222 586406038 816 False 453.00 593 87.79800 814 1643 2 chr3D.!!$F1 829
2 TraesCS3B01G546900 chr3D 586575142 586576688 1546 True 388.25 944 90.59725 1 1643 4 chr3D.!!$R1 1642
3 TraesCS3B01G546900 chr6D 426298205 426298842 637 True 833.00 833 90.62500 1703 2327 1 chr6D.!!$R1 624
4 TraesCS3B01G546900 chr6D 69917059 69917773 714 False 372.00 542 90.22300 1703 2327 2 chr6D.!!$F2 624
5 TraesCS3B01G546900 chr6B 641899190 641899803 613 True 802.00 802 90.19300 1708 2327 1 chr6B.!!$R2 619


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
673 681 0.034756 CCGGAACATCACACACTCCA 59.965 55.0 0.0 0.0 0.0 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2040 2465 0.108329 GGTGCTACAGTACCGCATGT 60.108 55.0 0.48 0.0 40.82 3.21 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 4.221342 GTGTGTTTCTGTGCATGTGTATG 58.779 43.478 0.00 0.00 37.36 2.39
38 39 6.459923 TCTGTGCATGTGTATGTAGTTTGTA 58.540 36.000 0.00 0.00 36.65 2.41
52 53 2.943033 AGTTTGTAGTGCTGGTTGTGTC 59.057 45.455 0.00 0.00 0.00 3.67
56 57 2.101082 TGTAGTGCTGGTTGTGTCGTAA 59.899 45.455 0.00 0.00 0.00 3.18
107 108 7.451255 AGGACCAAAAGTAATGAAATGTCATGA 59.549 33.333 0.00 0.00 44.02 3.07
147 148 2.293399 GGTTCGTTCCATTCTTGTGCTT 59.707 45.455 0.00 0.00 0.00 3.91
156 157 2.435372 TTCTTGTGCTTGGTTGGAGT 57.565 45.000 0.00 0.00 0.00 3.85
185 188 2.038557 AGGCATGGGTTACGGCTATAAG 59.961 50.000 0.00 0.00 33.16 1.73
188 191 3.743269 GCATGGGTTACGGCTATAAGTGT 60.743 47.826 0.00 0.00 0.00 3.55
192 195 4.465660 TGGGTTACGGCTATAAGTGTTACA 59.534 41.667 0.00 0.00 0.00 2.41
193 196 5.045872 GGGTTACGGCTATAAGTGTTACAG 58.954 45.833 0.00 0.00 0.00 2.74
194 197 5.045872 GGTTACGGCTATAAGTGTTACAGG 58.954 45.833 0.00 0.00 0.00 4.00
204 209 0.179001 GTGTTACAGGCCCACAAGGT 60.179 55.000 0.00 0.00 38.26 3.50
214 219 4.571243 CACAAGGTCGGGTGGTTT 57.429 55.556 0.00 0.00 0.00 3.27
218 223 1.770061 ACAAGGTCGGGTGGTTTTCTA 59.230 47.619 0.00 0.00 0.00 2.10
225 230 1.621814 CGGGTGGTTTTCTAGTCCTCA 59.378 52.381 0.00 0.00 0.00 3.86
226 231 2.353803 CGGGTGGTTTTCTAGTCCTCAG 60.354 54.545 0.00 0.00 0.00 3.35
227 232 2.615747 GGGTGGTTTTCTAGTCCTCAGC 60.616 54.545 0.00 0.00 0.00 4.26
228 233 2.615747 GGTGGTTTTCTAGTCCTCAGCC 60.616 54.545 0.00 0.00 0.00 4.85
230 235 1.405661 GGTTTTCTAGTCCTCAGCCGG 60.406 57.143 0.00 0.00 0.00 6.13
232 237 0.252103 TTTCTAGTCCTCAGCCGGGT 60.252 55.000 0.00 0.00 0.00 5.28
235 240 0.757188 CTAGTCCTCAGCCGGGTGAT 60.757 60.000 34.66 22.78 0.00 3.06
242 247 1.216977 CAGCCGGGTGATCGTTGTA 59.783 57.895 29.63 0.00 0.00 2.41
243 248 0.390603 CAGCCGGGTGATCGTTGTAA 60.391 55.000 29.63 0.00 0.00 2.41
244 249 0.108329 AGCCGGGTGATCGTTGTAAG 60.108 55.000 4.72 0.00 0.00 2.34
259 264 5.359009 TCGTTGTAAGAATCCTATTCTCGGT 59.641 40.000 2.79 0.00 0.00 4.69
260 265 6.040878 CGTTGTAAGAATCCTATTCTCGGTT 58.959 40.000 2.79 0.00 0.00 4.44
263 268 6.732154 TGTAAGAATCCTATTCTCGGTTACG 58.268 40.000 2.79 0.00 42.74 3.18
278 283 4.081531 TCGGTTACGGGAATTATCTTGTGT 60.082 41.667 0.00 0.00 41.39 3.72
279 284 5.126869 TCGGTTACGGGAATTATCTTGTGTA 59.873 40.000 0.00 0.00 41.39 2.90
281 286 6.480981 CGGTTACGGGAATTATCTTGTGTAAT 59.519 38.462 0.00 0.00 36.18 1.89
293 298 9.784531 ATTATCTTGTGTAATAGAATGGTCTGG 57.215 33.333 0.00 0.00 35.12 3.86
295 300 6.640518 TCTTGTGTAATAGAATGGTCTGGTC 58.359 40.000 0.00 0.00 35.12 4.02
296 301 6.440647 TCTTGTGTAATAGAATGGTCTGGTCT 59.559 38.462 0.00 0.00 35.12 3.85
297 302 5.977635 TGTGTAATAGAATGGTCTGGTCTG 58.022 41.667 0.00 0.00 35.12 3.51
303 308 0.401738 AATGGTCTGGTCTGGTGTGG 59.598 55.000 0.00 0.00 0.00 4.17
307 312 1.073923 GGTCTGGTCTGGTGTGGAATT 59.926 52.381 0.00 0.00 0.00 2.17
308 313 2.304761 GGTCTGGTCTGGTGTGGAATTA 59.695 50.000 0.00 0.00 0.00 1.40
309 314 3.054361 GGTCTGGTCTGGTGTGGAATTAT 60.054 47.826 0.00 0.00 0.00 1.28
310 315 4.192317 GTCTGGTCTGGTGTGGAATTATC 58.808 47.826 0.00 0.00 0.00 1.75
311 316 4.080863 GTCTGGTCTGGTGTGGAATTATCT 60.081 45.833 0.00 0.00 0.00 1.98
312 317 4.536090 TCTGGTCTGGTGTGGAATTATCTT 59.464 41.667 0.00 0.00 0.00 2.40
313 318 4.843728 TGGTCTGGTGTGGAATTATCTTC 58.156 43.478 0.00 0.00 0.00 2.87
314 319 4.536090 TGGTCTGGTGTGGAATTATCTTCT 59.464 41.667 0.00 0.00 0.00 2.85
315 320 5.014123 TGGTCTGGTGTGGAATTATCTTCTT 59.986 40.000 0.00 0.00 0.00 2.52
316 321 5.946377 GGTCTGGTGTGGAATTATCTTCTTT 59.054 40.000 0.00 0.00 0.00 2.52
317 322 6.434340 GGTCTGGTGTGGAATTATCTTCTTTT 59.566 38.462 0.00 0.00 0.00 2.27
318 323 7.039714 GGTCTGGTGTGGAATTATCTTCTTTTT 60.040 37.037 0.00 0.00 0.00 1.94
343 348 3.354089 AAAAACATCGTGTGAAGGCAG 57.646 42.857 0.00 0.00 0.00 4.85
344 349 1.238439 AAACATCGTGTGAAGGCAGG 58.762 50.000 0.00 0.00 0.00 4.85
345 350 0.606401 AACATCGTGTGAAGGCAGGG 60.606 55.000 0.00 0.00 0.00 4.45
346 351 1.746615 CATCGTGTGAAGGCAGGGG 60.747 63.158 0.00 0.00 0.00 4.79
347 352 2.971598 ATCGTGTGAAGGCAGGGGG 61.972 63.158 0.00 0.00 0.00 5.40
362 367 3.305181 GGGGGTCCTGCATTTCATT 57.695 52.632 0.00 0.00 0.00 2.57
363 368 2.452600 GGGGGTCCTGCATTTCATTA 57.547 50.000 0.00 0.00 0.00 1.90
364 369 2.745968 GGGGGTCCTGCATTTCATTAA 58.254 47.619 0.00 0.00 0.00 1.40
365 370 2.695147 GGGGGTCCTGCATTTCATTAAG 59.305 50.000 0.00 0.00 0.00 1.85
366 371 3.627237 GGGGGTCCTGCATTTCATTAAGA 60.627 47.826 0.00 0.00 0.00 2.10
367 372 4.023291 GGGGTCCTGCATTTCATTAAGAA 58.977 43.478 0.00 0.00 0.00 2.52
368 373 4.098501 GGGGTCCTGCATTTCATTAAGAAG 59.901 45.833 0.00 0.00 37.57 2.85
369 374 4.949856 GGGTCCTGCATTTCATTAAGAAGA 59.050 41.667 0.00 0.00 37.57 2.87
370 375 5.418840 GGGTCCTGCATTTCATTAAGAAGAA 59.581 40.000 0.00 0.00 37.57 2.52
371 376 6.071391 GGGTCCTGCATTTCATTAAGAAGAAA 60.071 38.462 0.00 0.00 37.57 2.52
372 377 7.378181 GGTCCTGCATTTCATTAAGAAGAAAA 58.622 34.615 0.00 0.00 37.30 2.29
373 378 7.543520 GGTCCTGCATTTCATTAAGAAGAAAAG 59.456 37.037 0.00 3.03 37.30 2.27
374 379 8.299570 GTCCTGCATTTCATTAAGAAGAAAAGA 58.700 33.333 0.00 0.00 37.30 2.52
375 380 8.517878 TCCTGCATTTCATTAAGAAGAAAAGAG 58.482 33.333 0.00 2.94 37.30 2.85
376 381 8.302438 CCTGCATTTCATTAAGAAGAAAAGAGT 58.698 33.333 0.00 0.00 37.30 3.24
377 382 9.688592 CTGCATTTCATTAAGAAGAAAAGAGTT 57.311 29.630 0.00 0.00 37.30 3.01
378 383 9.467258 TGCATTTCATTAAGAAGAAAAGAGTTG 57.533 29.630 5.10 1.61 37.30 3.16
379 384 8.919661 GCATTTCATTAAGAAGAAAAGAGTTGG 58.080 33.333 5.10 0.00 37.30 3.77
380 385 9.971922 CATTTCATTAAGAAGAAAAGAGTTGGT 57.028 29.630 5.10 0.00 37.30 3.67
382 387 7.745620 TCATTAAGAAGAAAAGAGTTGGTCC 57.254 36.000 0.00 0.00 0.00 4.46
383 388 7.287061 TCATTAAGAAGAAAAGAGTTGGTCCA 58.713 34.615 0.00 0.00 0.00 4.02
384 389 7.445402 TCATTAAGAAGAAAAGAGTTGGTCCAG 59.555 37.037 0.00 0.00 0.00 3.86
385 390 4.779993 AGAAGAAAAGAGTTGGTCCAGT 57.220 40.909 0.00 0.00 0.00 4.00
386 391 5.117406 AGAAGAAAAGAGTTGGTCCAGTT 57.883 39.130 0.00 0.00 0.00 3.16
387 392 5.510430 AGAAGAAAAGAGTTGGTCCAGTTT 58.490 37.500 0.00 0.00 0.00 2.66
388 393 6.659824 AGAAGAAAAGAGTTGGTCCAGTTTA 58.340 36.000 0.00 0.00 0.00 2.01
389 394 7.290813 AGAAGAAAAGAGTTGGTCCAGTTTAT 58.709 34.615 0.00 0.00 0.00 1.40
390 395 8.437575 AGAAGAAAAGAGTTGGTCCAGTTTATA 58.562 33.333 0.00 0.00 0.00 0.98
391 396 8.990163 AAGAAAAGAGTTGGTCCAGTTTATAA 57.010 30.769 0.00 0.00 0.00 0.98
392 397 8.622948 AGAAAAGAGTTGGTCCAGTTTATAAG 57.377 34.615 0.00 0.00 0.00 1.73
393 398 7.665974 AGAAAAGAGTTGGTCCAGTTTATAAGG 59.334 37.037 0.00 0.00 0.00 2.69
394 399 6.697641 AAGAGTTGGTCCAGTTTATAAGGA 57.302 37.500 0.00 0.00 0.00 3.36
395 400 6.697641 AGAGTTGGTCCAGTTTATAAGGAA 57.302 37.500 0.00 0.00 32.30 3.36
396 401 7.086685 AGAGTTGGTCCAGTTTATAAGGAAA 57.913 36.000 0.00 0.00 32.30 3.13
397 402 7.523415 AGAGTTGGTCCAGTTTATAAGGAAAA 58.477 34.615 0.00 0.00 32.30 2.29
398 403 7.447545 AGAGTTGGTCCAGTTTATAAGGAAAAC 59.552 37.037 0.00 9.15 37.14 2.43
399 404 6.492429 AGTTGGTCCAGTTTATAAGGAAAACC 59.508 38.462 11.60 7.77 37.51 3.27
400 405 5.954757 TGGTCCAGTTTATAAGGAAAACCA 58.045 37.500 6.89 6.89 37.51 3.67
401 406 6.374588 TGGTCCAGTTTATAAGGAAAACCAA 58.625 36.000 8.02 0.00 37.51 3.67
402 407 6.839657 TGGTCCAGTTTATAAGGAAAACCAAA 59.160 34.615 8.02 0.00 37.51 3.28
403 408 7.149973 GGTCCAGTTTATAAGGAAAACCAAAC 58.850 38.462 0.00 0.00 37.51 2.93
404 409 7.149973 GTCCAGTTTATAAGGAAAACCAAACC 58.850 38.462 0.00 0.00 37.51 3.27
405 410 6.268158 TCCAGTTTATAAGGAAAACCAAACCC 59.732 38.462 0.00 0.00 37.51 4.11
406 411 6.153756 CAGTTTATAAGGAAAACCAAACCCG 58.846 40.000 0.00 0.00 37.51 5.28
407 412 6.016108 CAGTTTATAAGGAAAACCAAACCCGA 60.016 38.462 0.00 0.00 37.51 5.14
408 413 6.550481 AGTTTATAAGGAAAACCAAACCCGAA 59.450 34.615 0.00 0.00 37.51 4.30
409 414 6.973460 TTATAAGGAAAACCAAACCCGAAA 57.027 33.333 0.00 0.00 0.00 3.46
410 415 5.873146 ATAAGGAAAACCAAACCCGAAAA 57.127 34.783 0.00 0.00 0.00 2.29
411 416 3.530265 AGGAAAACCAAACCCGAAAAC 57.470 42.857 0.00 0.00 0.00 2.43
412 417 2.168936 AGGAAAACCAAACCCGAAAACC 59.831 45.455 0.00 0.00 0.00 3.27
413 418 2.168936 GGAAAACCAAACCCGAAAACCT 59.831 45.455 0.00 0.00 0.00 3.50
414 419 3.384146 GGAAAACCAAACCCGAAAACCTA 59.616 43.478 0.00 0.00 0.00 3.08
415 420 4.141981 GGAAAACCAAACCCGAAAACCTAA 60.142 41.667 0.00 0.00 0.00 2.69
416 421 4.389890 AAACCAAACCCGAAAACCTAAC 57.610 40.909 0.00 0.00 0.00 2.34
417 422 3.015675 ACCAAACCCGAAAACCTAACA 57.984 42.857 0.00 0.00 0.00 2.41
418 423 3.363627 ACCAAACCCGAAAACCTAACAA 58.636 40.909 0.00 0.00 0.00 2.83
419 424 3.962063 ACCAAACCCGAAAACCTAACAAT 59.038 39.130 0.00 0.00 0.00 2.71
420 425 4.038282 ACCAAACCCGAAAACCTAACAATC 59.962 41.667 0.00 0.00 0.00 2.67
421 426 4.279922 CCAAACCCGAAAACCTAACAATCT 59.720 41.667 0.00 0.00 0.00 2.40
422 427 5.458015 CAAACCCGAAAACCTAACAATCTC 58.542 41.667 0.00 0.00 0.00 2.75
423 428 3.332034 ACCCGAAAACCTAACAATCTCG 58.668 45.455 0.00 0.00 0.00 4.04
424 429 2.676342 CCCGAAAACCTAACAATCTCGG 59.324 50.000 0.00 0.00 43.05 4.63
425 430 2.095372 CCGAAAACCTAACAATCTCGGC 59.905 50.000 0.00 0.00 38.07 5.54
426 431 3.000727 CGAAAACCTAACAATCTCGGCT 58.999 45.455 0.00 0.00 0.00 5.52
427 432 4.178540 CGAAAACCTAACAATCTCGGCTA 58.821 43.478 0.00 0.00 0.00 3.93
428 433 4.809426 CGAAAACCTAACAATCTCGGCTAT 59.191 41.667 0.00 0.00 0.00 2.97
429 434 5.293569 CGAAAACCTAACAATCTCGGCTATT 59.706 40.000 0.00 0.00 0.00 1.73
430 435 6.509677 CGAAAACCTAACAATCTCGGCTATTC 60.510 42.308 0.00 0.00 0.00 1.75
431 436 5.353394 AACCTAACAATCTCGGCTATTCA 57.647 39.130 0.00 0.00 0.00 2.57
432 437 4.950050 ACCTAACAATCTCGGCTATTCAG 58.050 43.478 0.00 0.00 0.00 3.02
433 438 4.649674 ACCTAACAATCTCGGCTATTCAGA 59.350 41.667 0.00 0.00 0.00 3.27
437 442 4.688021 ACAATCTCGGCTATTCAGAGAAC 58.312 43.478 0.00 0.00 46.36 3.01
442 447 8.300286 CAATCTCGGCTATTCAGAGAACTTATA 58.700 37.037 0.00 0.00 46.36 0.98
445 450 8.861086 TCTCGGCTATTCAGAGAACTTATAATT 58.139 33.333 0.00 0.00 41.86 1.40
540 548 7.972832 TTGGTCGGGTGCTTATTATTATTAG 57.027 36.000 0.00 0.00 0.00 1.73
542 550 5.353400 GGTCGGGTGCTTATTATTATTAGGC 59.647 44.000 0.00 0.00 0.00 3.93
543 551 6.171213 GTCGGGTGCTTATTATTATTAGGCT 58.829 40.000 0.00 0.00 0.00 4.58
544 552 6.092259 GTCGGGTGCTTATTATTATTAGGCTG 59.908 42.308 0.00 0.00 0.00 4.85
545 553 5.354234 CGGGTGCTTATTATTATTAGGCTGG 59.646 44.000 0.00 0.00 0.00 4.85
546 554 6.246163 GGGTGCTTATTATTATTAGGCTGGT 58.754 40.000 0.00 0.00 0.00 4.00
547 555 6.374613 GGGTGCTTATTATTATTAGGCTGGTC 59.625 42.308 0.00 0.00 0.00 4.02
548 556 6.940298 GGTGCTTATTATTATTAGGCTGGTCA 59.060 38.462 0.00 0.00 0.00 4.02
549 557 7.094762 GGTGCTTATTATTATTAGGCTGGTCAC 60.095 40.741 0.00 0.00 0.00 3.67
550 558 7.444183 GTGCTTATTATTATTAGGCTGGTCACA 59.556 37.037 0.00 0.00 0.00 3.58
551 559 7.996066 TGCTTATTATTATTAGGCTGGTCACAA 59.004 33.333 0.00 0.00 0.00 3.33
552 560 9.014297 GCTTATTATTATTAGGCTGGTCACAAT 57.986 33.333 0.00 0.00 0.00 2.71
554 562 7.765695 ATTATTATTAGGCTGGTCACAATGG 57.234 36.000 0.00 0.00 0.00 3.16
555 563 2.442236 ATTAGGCTGGTCACAATGGG 57.558 50.000 0.00 0.00 0.00 4.00
556 564 0.331278 TTAGGCTGGTCACAATGGGG 59.669 55.000 0.00 0.00 0.00 4.96
557 565 0.548926 TAGGCTGGTCACAATGGGGA 60.549 55.000 0.00 0.00 0.00 4.81
558 566 1.379044 GGCTGGTCACAATGGGGAG 60.379 63.158 0.00 0.00 0.00 4.30
559 567 1.379044 GCTGGTCACAATGGGGAGG 60.379 63.158 0.00 0.00 0.00 4.30
560 568 1.852157 GCTGGTCACAATGGGGAGGA 61.852 60.000 0.00 0.00 0.00 3.71
561 569 0.698238 CTGGTCACAATGGGGAGGAA 59.302 55.000 0.00 0.00 0.00 3.36
562 570 0.404040 TGGTCACAATGGGGAGGAAC 59.596 55.000 0.00 0.00 0.00 3.62
564 572 1.075536 GGTCACAATGGGGAGGAACTT 59.924 52.381 0.00 0.00 41.55 2.66
565 573 2.307686 GGTCACAATGGGGAGGAACTTA 59.692 50.000 0.00 0.00 41.55 2.24
566 574 3.610911 GTCACAATGGGGAGGAACTTAG 58.389 50.000 0.00 0.00 41.55 2.18
567 575 3.263425 GTCACAATGGGGAGGAACTTAGA 59.737 47.826 0.00 0.00 41.55 2.10
568 576 3.913799 TCACAATGGGGAGGAACTTAGAA 59.086 43.478 0.00 0.00 41.55 2.10
569 577 4.019321 TCACAATGGGGAGGAACTTAGAAG 60.019 45.833 0.00 0.00 41.55 2.85
570 578 3.916989 ACAATGGGGAGGAACTTAGAAGT 59.083 43.478 0.00 0.00 41.55 3.01
571 579 5.045869 CACAATGGGGAGGAACTTAGAAGTA 60.046 44.000 0.00 0.00 41.55 2.24
572 580 5.550403 ACAATGGGGAGGAACTTAGAAGTAA 59.450 40.000 0.00 0.00 41.55 2.24
573 581 5.695424 ATGGGGAGGAACTTAGAAGTAAC 57.305 43.478 0.00 0.00 41.55 2.50
574 582 4.495565 TGGGGAGGAACTTAGAAGTAACA 58.504 43.478 0.00 0.00 41.55 2.41
575 583 5.098663 TGGGGAGGAACTTAGAAGTAACAT 58.901 41.667 0.00 0.00 41.55 2.71
576 584 5.189145 TGGGGAGGAACTTAGAAGTAACATC 59.811 44.000 0.00 1.41 41.55 3.06
577 585 5.189145 GGGGAGGAACTTAGAAGTAACATCA 59.811 44.000 12.59 0.00 41.55 3.07
578 586 6.107343 GGGAGGAACTTAGAAGTAACATCAC 58.893 44.000 12.59 7.90 41.55 3.06
579 587 6.295688 GGGAGGAACTTAGAAGTAACATCACA 60.296 42.308 12.59 0.00 41.55 3.58
580 588 6.590677 GGAGGAACTTAGAAGTAACATCACAC 59.409 42.308 12.59 0.00 41.55 3.82
581 589 7.062749 AGGAACTTAGAAGTAACATCACACA 57.937 36.000 0.00 0.00 38.57 3.72
582 590 6.929606 AGGAACTTAGAAGTAACATCACACAC 59.070 38.462 0.00 0.00 38.57 3.82
583 591 6.929606 GGAACTTAGAAGTAACATCACACACT 59.070 38.462 0.00 0.00 38.57 3.55
584 592 7.441458 GGAACTTAGAAGTAACATCACACACTT 59.559 37.037 0.00 0.00 38.57 3.16
585 593 7.948278 ACTTAGAAGTAACATCACACACTTC 57.052 36.000 5.40 5.40 44.62 3.01
586 594 7.497595 ACTTAGAAGTAACATCACACACTTCA 58.502 34.615 13.89 0.61 45.98 3.02
587 595 7.985184 ACTTAGAAGTAACATCACACACTTCAA 59.015 33.333 13.89 6.91 45.98 2.69
588 596 8.902540 TTAGAAGTAACATCACACACTTCAAT 57.097 30.769 13.89 0.00 45.98 2.57
589 597 9.990360 TTAGAAGTAACATCACACACTTCAATA 57.010 29.630 13.89 0.00 45.98 1.90
590 598 8.311650 AGAAGTAACATCACACACTTCAATAC 57.688 34.615 13.89 0.00 45.98 1.89
591 599 7.931407 AGAAGTAACATCACACACTTCAATACA 59.069 33.333 13.89 0.00 45.98 2.29
592 600 8.445275 AAGTAACATCACACACTTCAATACAA 57.555 30.769 0.00 0.00 0.00 2.41
593 601 7.861630 AGTAACATCACACACTTCAATACAAC 58.138 34.615 0.00 0.00 0.00 3.32
594 602 6.942532 AACATCACACACTTCAATACAACT 57.057 33.333 0.00 0.00 0.00 3.16
595 603 6.942532 ACATCACACACTTCAATACAACTT 57.057 33.333 0.00 0.00 0.00 2.66
596 604 7.333528 ACATCACACACTTCAATACAACTTT 57.666 32.000 0.00 0.00 0.00 2.66
597 605 7.195646 ACATCACACACTTCAATACAACTTTG 58.804 34.615 0.00 0.00 0.00 2.77
598 606 5.577835 TCACACACTTCAATACAACTTTGC 58.422 37.500 0.00 0.00 0.00 3.68
599 607 5.356751 TCACACACTTCAATACAACTTTGCT 59.643 36.000 0.00 0.00 0.00 3.91
600 608 6.035843 CACACACTTCAATACAACTTTGCTT 58.964 36.000 0.00 0.00 0.00 3.91
601 609 7.066404 TCACACACTTCAATACAACTTTGCTTA 59.934 33.333 0.00 0.00 0.00 3.09
602 610 7.862372 CACACACTTCAATACAACTTTGCTTAT 59.138 33.333 0.00 0.00 0.00 1.73
603 611 7.862372 ACACACTTCAATACAACTTTGCTTATG 59.138 33.333 0.00 0.00 0.00 1.90
604 612 7.862372 CACACTTCAATACAACTTTGCTTATGT 59.138 33.333 0.00 0.00 0.00 2.29
605 613 7.862372 ACACTTCAATACAACTTTGCTTATGTG 59.138 33.333 0.00 0.00 0.00 3.21
606 614 7.326789 CACTTCAATACAACTTTGCTTATGTGG 59.673 37.037 0.00 0.00 0.00 4.17
607 615 5.708948 TCAATACAACTTTGCTTATGTGGC 58.291 37.500 0.00 0.00 0.00 5.01
608 616 5.242615 TCAATACAACTTTGCTTATGTGGCA 59.757 36.000 0.00 0.00 37.97 4.92
609 617 3.369546 ACAACTTTGCTTATGTGGCAC 57.630 42.857 11.55 11.55 39.55 5.01
610 618 2.692557 ACAACTTTGCTTATGTGGCACA 59.307 40.909 24.36 24.36 39.55 4.57
611 619 3.321682 ACAACTTTGCTTATGTGGCACAT 59.678 39.130 33.18 33.18 44.52 3.21
612 620 4.522405 ACAACTTTGCTTATGTGGCACATA 59.478 37.500 31.06 31.06 44.52 2.29
613 621 5.185635 ACAACTTTGCTTATGTGGCACATAT 59.814 36.000 33.89 18.57 44.52 1.78
614 622 5.920193 ACTTTGCTTATGTGGCACATATT 57.080 34.783 33.89 17.87 44.52 1.28
615 623 6.284891 ACTTTGCTTATGTGGCACATATTT 57.715 33.333 33.89 17.52 44.52 1.40
616 624 7.403312 ACTTTGCTTATGTGGCACATATTTA 57.597 32.000 33.89 21.55 44.52 1.40
617 625 7.835822 ACTTTGCTTATGTGGCACATATTTAA 58.164 30.769 33.89 25.24 44.52 1.52
618 626 8.477256 ACTTTGCTTATGTGGCACATATTTAAT 58.523 29.630 33.89 15.77 44.52 1.40
619 627 8.645730 TTTGCTTATGTGGCACATATTTAATG 57.354 30.769 33.89 20.34 44.52 1.90
620 628 7.579761 TGCTTATGTGGCACATATTTAATGA 57.420 32.000 33.89 19.68 44.52 2.57
621 629 8.005192 TGCTTATGTGGCACATATTTAATGAA 57.995 30.769 33.89 20.49 44.52 2.57
622 630 8.136800 TGCTTATGTGGCACATATTTAATGAAG 58.863 33.333 33.89 27.40 44.52 3.02
623 631 8.352201 GCTTATGTGGCACATATTTAATGAAGA 58.648 33.333 33.89 17.83 44.52 2.87
624 632 9.888878 CTTATGTGGCACATATTTAATGAAGAG 57.111 33.333 33.89 22.09 44.52 2.85
625 633 9.625747 TTATGTGGCACATATTTAATGAAGAGA 57.374 29.630 33.89 16.11 44.52 3.10
626 634 7.558161 TGTGGCACATATTTAATGAAGAGAG 57.442 36.000 17.96 0.00 44.52 3.20
627 635 7.337938 TGTGGCACATATTTAATGAAGAGAGA 58.662 34.615 17.96 0.00 44.52 3.10
628 636 7.496920 TGTGGCACATATTTAATGAAGAGAGAG 59.503 37.037 17.96 0.00 44.52 3.20
629 637 6.994496 TGGCACATATTTAATGAAGAGAGAGG 59.006 38.462 0.00 0.00 0.00 3.69
630 638 6.995091 GGCACATATTTAATGAAGAGAGAGGT 59.005 38.462 0.00 0.00 0.00 3.85
631 639 7.041508 GGCACATATTTAATGAAGAGAGAGGTG 60.042 40.741 0.00 0.00 0.00 4.00
632 640 7.519649 GCACATATTTAATGAAGAGAGAGGTGC 60.520 40.741 0.00 0.00 37.76 5.01
633 641 7.714377 CACATATTTAATGAAGAGAGAGGTGCT 59.286 37.037 0.00 0.00 0.00 4.40
634 642 8.270744 ACATATTTAATGAAGAGAGAGGTGCTT 58.729 33.333 0.00 0.00 0.00 3.91
635 643 6.998968 ATTTAATGAAGAGAGAGGTGCTTG 57.001 37.500 0.00 0.00 0.00 4.01
636 644 5.489792 TTAATGAAGAGAGAGGTGCTTGT 57.510 39.130 0.00 0.00 0.00 3.16
637 645 2.827800 TGAAGAGAGAGGTGCTTGTG 57.172 50.000 0.00 0.00 0.00 3.33
638 646 1.345741 TGAAGAGAGAGGTGCTTGTGG 59.654 52.381 0.00 0.00 0.00 4.17
639 647 1.346068 GAAGAGAGAGGTGCTTGTGGT 59.654 52.381 0.00 0.00 0.00 4.16
640 648 2.310779 AGAGAGAGGTGCTTGTGGTA 57.689 50.000 0.00 0.00 0.00 3.25
641 649 2.609747 AGAGAGAGGTGCTTGTGGTAA 58.390 47.619 0.00 0.00 0.00 2.85
642 650 2.300437 AGAGAGAGGTGCTTGTGGTAAC 59.700 50.000 0.00 0.00 0.00 2.50
643 651 2.300437 GAGAGAGGTGCTTGTGGTAACT 59.700 50.000 0.00 0.00 37.61 2.24
644 652 3.507411 AGAGAGGTGCTTGTGGTAACTA 58.493 45.455 0.00 0.00 37.61 2.24
645 653 3.511934 AGAGAGGTGCTTGTGGTAACTAG 59.488 47.826 0.00 0.00 37.61 2.57
662 670 5.672421 AACTAGCTAAGTTACCGGAACAT 57.328 39.130 9.46 4.03 46.85 2.71
663 671 5.259832 ACTAGCTAAGTTACCGGAACATC 57.740 43.478 9.46 0.00 40.86 3.06
664 672 4.708421 ACTAGCTAAGTTACCGGAACATCA 59.292 41.667 9.46 0.00 40.86 3.07
665 673 3.858247 AGCTAAGTTACCGGAACATCAC 58.142 45.455 9.46 0.66 40.86 3.06
666 674 3.259876 AGCTAAGTTACCGGAACATCACA 59.740 43.478 9.46 0.00 40.86 3.58
667 675 3.370061 GCTAAGTTACCGGAACATCACAC 59.630 47.826 9.46 0.00 40.86 3.82
668 676 3.478857 AAGTTACCGGAACATCACACA 57.521 42.857 9.46 0.00 40.86 3.72
669 677 2.762745 AGTTACCGGAACATCACACAC 58.237 47.619 9.46 0.00 40.86 3.82
670 678 2.367567 AGTTACCGGAACATCACACACT 59.632 45.455 9.46 0.00 40.86 3.55
671 679 2.735134 GTTACCGGAACATCACACACTC 59.265 50.000 9.46 0.00 38.02 3.51
672 680 0.034896 ACCGGAACATCACACACTCC 59.965 55.000 9.46 0.00 0.00 3.85
673 681 0.034756 CCGGAACATCACACACTCCA 59.965 55.000 0.00 0.00 0.00 3.86
674 682 1.542328 CCGGAACATCACACACTCCAA 60.542 52.381 0.00 0.00 0.00 3.53
675 683 1.800586 CGGAACATCACACACTCCAAG 59.199 52.381 0.00 0.00 0.00 3.61
676 684 2.547855 CGGAACATCACACACTCCAAGA 60.548 50.000 0.00 0.00 0.00 3.02
677 685 3.476552 GGAACATCACACACTCCAAGAA 58.523 45.455 0.00 0.00 0.00 2.52
678 686 3.882888 GGAACATCACACACTCCAAGAAA 59.117 43.478 0.00 0.00 0.00 2.52
679 687 4.261197 GGAACATCACACACTCCAAGAAAC 60.261 45.833 0.00 0.00 0.00 2.78
680 688 3.884895 ACATCACACACTCCAAGAAACA 58.115 40.909 0.00 0.00 0.00 2.83
681 689 4.269183 ACATCACACACTCCAAGAAACAA 58.731 39.130 0.00 0.00 0.00 2.83
682 690 4.889409 ACATCACACACTCCAAGAAACAAT 59.111 37.500 0.00 0.00 0.00 2.71
683 691 4.898829 TCACACACTCCAAGAAACAATG 57.101 40.909 0.00 0.00 0.00 2.82
684 692 4.522114 TCACACACTCCAAGAAACAATGA 58.478 39.130 0.00 0.00 0.00 2.57
685 693 4.576053 TCACACACTCCAAGAAACAATGAG 59.424 41.667 0.00 0.00 0.00 2.90
686 694 4.336433 CACACACTCCAAGAAACAATGAGT 59.664 41.667 0.00 0.00 36.77 3.41
687 695 4.576463 ACACACTCCAAGAAACAATGAGTC 59.424 41.667 0.00 0.00 34.21 3.36
688 696 4.818546 CACACTCCAAGAAACAATGAGTCT 59.181 41.667 0.00 0.00 34.21 3.24
689 697 5.991606 CACACTCCAAGAAACAATGAGTCTA 59.008 40.000 0.00 0.00 34.21 2.59
690 698 6.652481 CACACTCCAAGAAACAATGAGTCTAT 59.348 38.462 0.00 0.00 34.21 1.98
691 699 7.819415 CACACTCCAAGAAACAATGAGTCTATA 59.181 37.037 0.00 0.00 34.21 1.31
692 700 8.375506 ACACTCCAAGAAACAATGAGTCTATAA 58.624 33.333 0.00 0.00 34.21 0.98
693 701 8.660373 CACTCCAAGAAACAATGAGTCTATAAC 58.340 37.037 0.00 0.00 34.21 1.89
694 702 7.824779 ACTCCAAGAAACAATGAGTCTATAACC 59.175 37.037 0.00 0.00 30.81 2.85
695 703 7.918076 TCCAAGAAACAATGAGTCTATAACCT 58.082 34.615 0.00 0.00 0.00 3.50
696 704 9.042450 TCCAAGAAACAATGAGTCTATAACCTA 57.958 33.333 0.00 0.00 0.00 3.08
697 705 9.667107 CCAAGAAACAATGAGTCTATAACCTAA 57.333 33.333 0.00 0.00 0.00 2.69
717 725 9.801873 AACCTAATAAATACATTGTTGCATGAC 57.198 29.630 0.00 0.00 0.00 3.06
718 726 8.965819 ACCTAATAAATACATTGTTGCATGACA 58.034 29.630 0.00 0.00 0.00 3.58
719 727 9.236691 CCTAATAAATACATTGTTGCATGACAC 57.763 33.333 0.00 0.00 0.00 3.67
722 730 9.787532 AATAAATACATTGTTGCATGACACTAC 57.212 29.630 0.00 0.00 0.00 2.73
723 731 6.816134 AATACATTGTTGCATGACACTACA 57.184 33.333 0.00 0.00 0.00 2.74
724 732 7.395190 AATACATTGTTGCATGACACTACAT 57.605 32.000 0.00 0.00 0.00 2.29
725 733 8.504812 AATACATTGTTGCATGACACTACATA 57.495 30.769 0.00 0.00 0.00 2.29
726 734 6.426980 ACATTGTTGCATGACACTACATAG 57.573 37.500 0.00 0.00 0.00 2.23
727 735 6.172630 ACATTGTTGCATGACACTACATAGA 58.827 36.000 0.00 0.00 0.00 1.98
728 736 6.825213 ACATTGTTGCATGACACTACATAGAT 59.175 34.615 0.00 0.00 0.00 1.98
729 737 6.667007 TTGTTGCATGACACTACATAGATG 57.333 37.500 0.00 0.00 0.00 2.90
730 738 5.733676 TGTTGCATGACACTACATAGATGT 58.266 37.500 0.00 0.08 44.48 3.06
731 739 6.172630 TGTTGCATGACACTACATAGATGTT 58.827 36.000 0.00 0.00 41.97 2.71
732 740 6.313658 TGTTGCATGACACTACATAGATGTTC 59.686 38.462 0.00 0.00 41.97 3.18
733 741 5.359756 TGCATGACACTACATAGATGTTCC 58.640 41.667 0.00 0.00 41.97 3.62
734 742 5.129320 TGCATGACACTACATAGATGTTCCT 59.871 40.000 0.00 0.00 41.97 3.36
735 743 6.323739 TGCATGACACTACATAGATGTTCCTA 59.676 38.462 0.00 0.00 41.97 2.94
736 744 6.642950 GCATGACACTACATAGATGTTCCTAC 59.357 42.308 0.00 0.00 41.97 3.18
737 745 6.710597 TGACACTACATAGATGTTCCTACC 57.289 41.667 0.00 0.00 41.97 3.18
738 746 5.597182 TGACACTACATAGATGTTCCTACCC 59.403 44.000 0.00 0.00 41.97 3.69
739 747 5.525484 ACACTACATAGATGTTCCTACCCA 58.475 41.667 0.00 0.00 41.97 4.51
740 748 5.363005 ACACTACATAGATGTTCCTACCCAC 59.637 44.000 0.00 0.00 41.97 4.61
741 749 5.598830 CACTACATAGATGTTCCTACCCACT 59.401 44.000 0.00 0.00 41.97 4.00
742 750 6.776116 CACTACATAGATGTTCCTACCCACTA 59.224 42.308 0.00 0.00 41.97 2.74
743 751 7.451877 CACTACATAGATGTTCCTACCCACTAT 59.548 40.741 0.00 0.00 41.97 2.12
744 752 6.672266 ACATAGATGTTCCTACCCACTATG 57.328 41.667 0.00 0.00 37.90 2.23
745 753 6.382087 ACATAGATGTTCCTACCCACTATGA 58.618 40.000 1.97 0.00 37.90 2.15
746 754 6.844388 ACATAGATGTTCCTACCCACTATGAA 59.156 38.462 1.97 0.00 37.90 2.57
747 755 5.878406 AGATGTTCCTACCCACTATGAAG 57.122 43.478 0.00 0.00 0.00 3.02
748 756 5.529289 AGATGTTCCTACCCACTATGAAGA 58.471 41.667 0.00 0.00 0.00 2.87
749 757 6.146760 AGATGTTCCTACCCACTATGAAGAT 58.853 40.000 0.00 0.00 0.00 2.40
750 758 5.614324 TGTTCCTACCCACTATGAAGATG 57.386 43.478 0.00 0.00 0.00 2.90
751 759 4.408921 TGTTCCTACCCACTATGAAGATGG 59.591 45.833 0.00 0.00 0.00 3.51
752 760 4.280789 TCCTACCCACTATGAAGATGGT 57.719 45.455 0.00 0.00 35.37 3.55
753 761 5.412617 TCCTACCCACTATGAAGATGGTA 57.587 43.478 0.00 0.00 33.89 3.25
754 762 5.784023 TCCTACCCACTATGAAGATGGTAA 58.216 41.667 0.00 0.00 34.37 2.85
755 763 5.601313 TCCTACCCACTATGAAGATGGTAAC 59.399 44.000 0.00 0.00 34.37 2.50
772 780 5.586877 TGGTAACATAGTCTAGGGAAGTGT 58.413 41.667 0.00 0.00 46.17 3.55
773 781 5.421056 TGGTAACATAGTCTAGGGAAGTGTG 59.579 44.000 0.00 0.00 46.17 3.82
774 782 5.421374 GGTAACATAGTCTAGGGAAGTGTGT 59.579 44.000 0.00 0.00 0.00 3.72
775 783 6.604795 GGTAACATAGTCTAGGGAAGTGTGTA 59.395 42.308 0.00 0.00 0.00 2.90
776 784 7.123247 GGTAACATAGTCTAGGGAAGTGTGTAA 59.877 40.741 0.00 0.00 0.00 2.41
777 785 7.549147 AACATAGTCTAGGGAAGTGTGTAAA 57.451 36.000 0.00 0.00 0.00 2.01
778 786 7.735326 ACATAGTCTAGGGAAGTGTGTAAAT 57.265 36.000 0.00 0.00 0.00 1.40
779 787 8.147244 ACATAGTCTAGGGAAGTGTGTAAATT 57.853 34.615 0.00 0.00 0.00 1.82
780 788 9.263446 ACATAGTCTAGGGAAGTGTGTAAATTA 57.737 33.333 0.00 0.00 0.00 1.40
781 789 9.530633 CATAGTCTAGGGAAGTGTGTAAATTAC 57.469 37.037 0.00 0.00 0.00 1.89
782 790 7.793948 AGTCTAGGGAAGTGTGTAAATTACT 57.206 36.000 4.67 0.00 0.00 2.24
783 791 8.890410 AGTCTAGGGAAGTGTGTAAATTACTA 57.110 34.615 4.67 0.00 0.00 1.82
784 792 8.968969 AGTCTAGGGAAGTGTGTAAATTACTAG 58.031 37.037 4.67 0.00 0.00 2.57
785 793 7.705752 GTCTAGGGAAGTGTGTAAATTACTAGC 59.294 40.741 4.67 0.00 0.00 3.42
786 794 6.622427 AGGGAAGTGTGTAAATTACTAGCT 57.378 37.500 4.67 0.00 0.00 3.32
787 795 7.017319 AGGGAAGTGTGTAAATTACTAGCTT 57.983 36.000 4.67 5.74 0.00 3.74
788 796 8.142485 AGGGAAGTGTGTAAATTACTAGCTTA 57.858 34.615 4.67 0.00 0.00 3.09
789 797 8.769359 AGGGAAGTGTGTAAATTACTAGCTTAT 58.231 33.333 4.67 0.00 0.00 1.73
790 798 8.827677 GGGAAGTGTGTAAATTACTAGCTTATG 58.172 37.037 4.67 0.00 0.00 1.90
791 799 9.379791 GGAAGTGTGTAAATTACTAGCTTATGT 57.620 33.333 4.67 0.00 0.00 2.29
797 805 9.704098 GTGTAAATTACTAGCTTATGTTCTTGC 57.296 33.333 4.67 0.00 0.00 4.01
798 806 8.889717 TGTAAATTACTAGCTTATGTTCTTGCC 58.110 33.333 4.67 0.00 0.00 4.52
799 807 6.944234 AATTACTAGCTTATGTTCTTGCCC 57.056 37.500 0.00 0.00 0.00 5.36
800 808 5.429681 TTACTAGCTTATGTTCTTGCCCA 57.570 39.130 0.00 0.00 0.00 5.36
801 809 4.510167 ACTAGCTTATGTTCTTGCCCAT 57.490 40.909 0.00 0.00 0.00 4.00
802 810 4.860022 ACTAGCTTATGTTCTTGCCCATT 58.140 39.130 0.00 0.00 0.00 3.16
803 811 6.001449 ACTAGCTTATGTTCTTGCCCATTA 57.999 37.500 0.00 0.00 0.00 1.90
804 812 6.605119 ACTAGCTTATGTTCTTGCCCATTAT 58.395 36.000 0.00 0.00 0.00 1.28
805 813 5.779529 AGCTTATGTTCTTGCCCATTATG 57.220 39.130 0.00 0.00 0.00 1.90
806 814 5.448654 AGCTTATGTTCTTGCCCATTATGA 58.551 37.500 0.00 0.00 0.00 2.15
807 815 5.300286 AGCTTATGTTCTTGCCCATTATGAC 59.700 40.000 0.00 0.00 0.00 3.06
808 816 5.507985 GCTTATGTTCTTGCCCATTATGACC 60.508 44.000 0.00 0.00 0.00 4.02
809 817 3.448093 TGTTCTTGCCCATTATGACCA 57.552 42.857 0.00 0.00 0.00 4.02
810 818 3.355378 TGTTCTTGCCCATTATGACCAG 58.645 45.455 0.00 0.00 0.00 4.00
811 819 2.057137 TCTTGCCCATTATGACCAGC 57.943 50.000 0.00 0.00 0.00 4.85
812 820 1.035139 CTTGCCCATTATGACCAGCC 58.965 55.000 0.00 0.00 0.00 4.85
831 839 0.163788 CTTAGCCGCTGTTGTTCACG 59.836 55.000 2.16 0.00 0.00 4.35
917 944 3.294943 CCAATACCGAACGTCGACTATC 58.705 50.000 14.70 10.40 43.74 2.08
922 949 2.182825 CCGAACGTCGACTATCCAAAG 58.817 52.381 14.70 0.00 43.74 2.77
924 951 2.537401 GAACGTCGACTATCCAAAGGG 58.463 52.381 14.70 0.00 0.00 3.95
971 1274 3.875838 CTCCTATACGAGCTGCACC 57.124 57.895 1.02 0.00 0.00 5.01
992 1295 0.673985 TCCACGGGATCGATTAGCTG 59.326 55.000 0.00 0.00 40.11 4.24
1118 1421 2.860293 GGTGATGCCAACGTCGTG 59.140 61.111 0.00 0.00 37.17 4.35
1123 1441 2.781595 GATGCCAACGTCGTGGTCCT 62.782 60.000 8.05 0.00 41.12 3.85
1124 1442 2.737376 GCCAACGTCGTGGTCCTC 60.737 66.667 8.05 0.00 41.12 3.71
1134 1452 3.165606 GTGGTCCTCCATGAAGCTG 57.834 57.895 0.00 0.00 46.20 4.24
1170 1488 4.577246 GAGCTCGCGGATTCGGCT 62.577 66.667 6.13 6.79 38.19 5.52
1347 1665 1.671379 GGAGTGAACGGAACAGCCC 60.671 63.158 0.00 0.00 0.00 5.19
1386 1704 0.250467 TCCTTCCTGCACTGCACTTC 60.250 55.000 0.00 0.00 33.79 3.01
1405 1723 1.514087 GCCCGTCCGATCAGTGTTA 59.486 57.895 0.00 0.00 0.00 2.41
1444 1762 1.267261 CCATTTTGCCCGTGTCGTTTA 59.733 47.619 0.00 0.00 0.00 2.01
1468 1786 3.536956 TCGTGTCAGGTTTCTTGAAGT 57.463 42.857 0.00 0.00 0.00 3.01
1469 1787 4.659111 TCGTGTCAGGTTTCTTGAAGTA 57.341 40.909 0.00 0.00 0.00 2.24
1470 1788 4.617959 TCGTGTCAGGTTTCTTGAAGTAG 58.382 43.478 0.00 0.00 0.00 2.57
1503 1821 1.597195 TGCACGCAGTCTTGTTTGTAG 59.403 47.619 0.00 0.00 41.61 2.74
1504 1822 1.660333 GCACGCAGTCTTGTTTGTAGC 60.660 52.381 0.00 0.00 41.61 3.58
1551 1869 4.320275 CCATCCAATCATGATCGAAAGCAG 60.320 45.833 9.06 0.00 0.00 4.24
1554 1872 4.514066 TCCAATCATGATCGAAAGCAGATG 59.486 41.667 9.06 0.00 0.00 2.90
1594 1912 6.079712 AGCCATTATTAAAGACTGGGAGTT 57.920 37.500 0.00 0.00 0.00 3.01
1634 1953 2.363306 TTGGCAGGAGTCAACACATT 57.637 45.000 0.00 0.00 33.69 2.71
1643 1962 6.036517 GCAGGAGTCAACACATTTGATAGTAG 59.963 42.308 0.00 0.00 0.00 2.57
1644 1963 7.099764 CAGGAGTCAACACATTTGATAGTAGT 58.900 38.462 0.00 0.00 0.00 2.73
1645 1964 7.063898 CAGGAGTCAACACATTTGATAGTAGTG 59.936 40.741 0.00 0.00 36.34 2.74
1646 1965 6.874134 GGAGTCAACACATTTGATAGTAGTGT 59.126 38.462 0.00 0.00 44.53 3.55
1647 1966 7.063544 GGAGTCAACACATTTGATAGTAGTGTC 59.936 40.741 0.00 0.00 42.08 3.67
1648 1967 7.671302 AGTCAACACATTTGATAGTAGTGTCT 58.329 34.615 0.00 0.00 42.08 3.41
1649 1968 7.815068 AGTCAACACATTTGATAGTAGTGTCTC 59.185 37.037 0.00 0.00 42.08 3.36
1650 1969 7.598869 GTCAACACATTTGATAGTAGTGTCTCA 59.401 37.037 0.00 0.00 42.08 3.27
1651 1970 8.147704 TCAACACATTTGATAGTAGTGTCTCAA 58.852 33.333 0.00 0.00 42.08 3.02
1652 1971 8.773645 CAACACATTTGATAGTAGTGTCTCAAA 58.226 33.333 0.00 0.00 42.08 2.69
1653 1972 8.902540 ACACATTTGATAGTAGTGTCTCAAAA 57.097 30.769 0.00 0.00 38.98 2.44
1654 1973 9.337396 ACACATTTGATAGTAGTGTCTCAAAAA 57.663 29.630 0.00 0.00 38.98 1.94
1685 2004 8.133754 TGATAGTACATTACATGGTTAAACGC 57.866 34.615 0.00 0.00 33.60 4.84
1686 2005 5.459110 AGTACATTACATGGTTAAACGCG 57.541 39.130 3.53 3.53 33.60 6.01
1687 2006 5.170021 AGTACATTACATGGTTAAACGCGA 58.830 37.500 15.93 0.00 33.60 5.87
1688 2007 4.330740 ACATTACATGGTTAAACGCGAC 57.669 40.909 15.93 0.00 33.60 5.19
1689 2008 3.181528 ACATTACATGGTTAAACGCGACG 60.182 43.478 15.93 0.00 33.60 5.12
1690 2009 2.063156 TACATGGTTAAACGCGACGT 57.937 45.000 15.93 0.00 43.97 4.34
1691 2010 0.509499 ACATGGTTAAACGCGACGTG 59.491 50.000 15.93 6.90 39.99 4.49
1692 2011 0.179235 CATGGTTAAACGCGACGTGG 60.179 55.000 15.93 0.00 39.99 4.94
1693 2012 0.319727 ATGGTTAAACGCGACGTGGA 60.320 50.000 15.93 0.00 39.99 4.02
1694 2013 1.214373 TGGTTAAACGCGACGTGGAC 61.214 55.000 15.93 3.22 39.99 4.02
1695 2014 1.126438 GTTAAACGCGACGTGGACG 59.874 57.895 15.93 7.28 39.99 4.79
1696 2015 1.009108 TTAAACGCGACGTGGACGA 60.009 52.632 15.93 0.00 39.99 4.20
1697 2016 0.387112 TTAAACGCGACGTGGACGAT 60.387 50.000 15.93 6.42 39.99 3.73
1698 2017 0.445829 TAAACGCGACGTGGACGATA 59.554 50.000 15.93 9.56 39.99 2.92
1699 2018 0.795735 AAACGCGACGTGGACGATAG 60.796 55.000 15.93 3.64 39.99 2.08
1700 2019 1.638388 AACGCGACGTGGACGATAGA 61.638 55.000 15.93 0.00 39.99 1.98
1701 2020 1.650536 CGCGACGTGGACGATAGAC 60.651 63.158 0.00 0.00 43.02 2.59
1736 2055 9.700831 ATAACACTAAGCTCCCTAATTTCAAAT 57.299 29.630 0.00 0.00 0.00 2.32
1903 2315 9.399403 CCTACTTTTGAAGCTCTTTAATTCAAC 57.601 33.333 1.58 0.00 41.33 3.18
1988 2402 1.202256 GCAGCAACCGGCCTATAAAAC 60.202 52.381 0.00 0.00 46.50 2.43
1993 2407 3.004002 GCAACCGGCCTATAAAACCATAC 59.996 47.826 0.00 0.00 36.11 2.39
2000 2414 4.082949 GGCCTATAAAACCATACCAATCGC 60.083 45.833 0.00 0.00 0.00 4.58
2067 2492 4.446719 GCGGTACTGTAGCACCAATATAAC 59.553 45.833 16.31 0.00 34.25 1.89
2107 2532 8.947055 ATGCAGAAATTTTCCCACATAAATAC 57.053 30.769 5.52 0.00 0.00 1.89
2128 2553 4.964593 ACGGGTTTATTAGCGGATAACAT 58.035 39.130 0.00 0.00 0.00 2.71
2224 2649 7.245292 CCCCCAAACTAAATATTCCATCCATA 58.755 38.462 0.00 0.00 0.00 2.74
2225 2650 7.732593 CCCCCAAACTAAATATTCCATCCATAA 59.267 37.037 0.00 0.00 0.00 1.90
2258 2683 6.829229 AAGGGTATTAGTTTTTCGGAAAGG 57.171 37.500 3.09 0.00 0.00 3.11
2299 2725 3.506067 CCAAGTTCGGAGCCAAAATTACT 59.494 43.478 0.00 0.00 0.00 2.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
16 17 6.147000 CACTACAAACTACATACACATGCACA 59.853 38.462 0.00 0.00 35.39 4.57
29 30 3.875134 ACACAACCAGCACTACAAACTAC 59.125 43.478 0.00 0.00 0.00 2.73
38 39 1.578583 GTTACGACACAACCAGCACT 58.421 50.000 0.00 0.00 0.00 4.40
52 53 5.451520 CCAACTCCATCCTTAGTAGGTTACG 60.452 48.000 0.00 0.00 42.60 3.18
56 57 4.076175 ACCAACTCCATCCTTAGTAGGT 57.924 45.455 0.00 0.00 42.60 3.08
107 108 8.262715 ACGAACCAATTTCTTTGAAACAAAAT 57.737 26.923 0.00 0.00 37.53 1.82
110 111 6.311690 GGAACGAACCAATTTCTTTGAAACAA 59.688 34.615 0.00 0.00 37.53 2.83
130 131 1.608590 ACCAAGCACAAGAATGGAACG 59.391 47.619 0.00 0.00 36.75 3.95
163 166 0.843984 ATAGCCGTAACCCATGCCTT 59.156 50.000 0.00 0.00 0.00 4.35
164 167 1.724545 TATAGCCGTAACCCATGCCT 58.275 50.000 0.00 0.00 0.00 4.75
173 176 4.441913 GGCCTGTAACACTTATAGCCGTAA 60.442 45.833 0.00 0.00 0.00 3.18
185 188 0.179001 ACCTTGTGGGCCTGTAACAC 60.179 55.000 4.53 1.79 39.10 3.32
188 191 1.373435 CGACCTTGTGGGCCTGTAA 59.627 57.895 4.53 0.00 38.45 2.41
204 209 1.897802 GAGGACTAGAAAACCACCCGA 59.102 52.381 0.00 0.00 0.00 5.14
208 213 2.701107 GGCTGAGGACTAGAAAACCAC 58.299 52.381 0.00 0.00 0.00 4.16
214 219 0.970937 CACCCGGCTGAGGACTAGAA 60.971 60.000 0.00 0.00 0.00 2.10
218 223 2.039624 ATCACCCGGCTGAGGACT 59.960 61.111 5.55 0.00 0.00 3.85
225 230 0.108329 CTTACAACGATCACCCGGCT 60.108 55.000 0.00 0.00 0.00 5.52
226 231 0.108520 TCTTACAACGATCACCCGGC 60.109 55.000 0.00 0.00 0.00 6.13
227 232 2.373540 TTCTTACAACGATCACCCGG 57.626 50.000 0.00 0.00 0.00 5.73
228 233 2.864343 GGATTCTTACAACGATCACCCG 59.136 50.000 0.00 0.00 0.00 5.28
230 235 7.210873 AGAATAGGATTCTTACAACGATCACC 58.789 38.462 0.00 0.00 0.00 4.02
232 237 7.139392 CGAGAATAGGATTCTTACAACGATCA 58.861 38.462 3.34 0.00 0.00 2.92
235 240 5.359009 ACCGAGAATAGGATTCTTACAACGA 59.641 40.000 3.34 0.00 33.72 3.85
242 247 4.038883 CCCGTAACCGAGAATAGGATTCTT 59.961 45.833 3.34 0.00 33.72 2.52
243 248 3.573110 CCCGTAACCGAGAATAGGATTCT 59.427 47.826 1.34 1.34 33.72 2.40
244 249 3.571401 TCCCGTAACCGAGAATAGGATTC 59.429 47.826 0.00 0.00 33.72 2.52
263 268 9.574516 ACCATTCTATTACACAAGATAATTCCC 57.425 33.333 0.00 0.00 0.00 3.97
278 283 5.030147 ACACCAGACCAGACCATTCTATTA 58.970 41.667 0.00 0.00 0.00 0.98
279 284 3.846588 ACACCAGACCAGACCATTCTATT 59.153 43.478 0.00 0.00 0.00 1.73
281 286 2.567169 CACACCAGACCAGACCATTCTA 59.433 50.000 0.00 0.00 0.00 2.10
293 298 7.454260 AAAAGAAGATAATTCCACACCAGAC 57.546 36.000 0.00 0.00 0.00 3.51
323 328 2.034558 CCTGCCTTCACACGATGTTTTT 59.965 45.455 0.00 0.00 0.00 1.94
324 329 1.608590 CCTGCCTTCACACGATGTTTT 59.391 47.619 0.00 0.00 0.00 2.43
325 330 1.238439 CCTGCCTTCACACGATGTTT 58.762 50.000 0.00 0.00 0.00 2.83
326 331 0.606401 CCCTGCCTTCACACGATGTT 60.606 55.000 0.00 0.00 0.00 2.71
327 332 1.003355 CCCTGCCTTCACACGATGT 60.003 57.895 0.00 0.00 0.00 3.06
328 333 1.746615 CCCCTGCCTTCACACGATG 60.747 63.158 0.00 0.00 0.00 3.84
329 334 2.671070 CCCCTGCCTTCACACGAT 59.329 61.111 0.00 0.00 0.00 3.73
330 335 3.636231 CCCCCTGCCTTCACACGA 61.636 66.667 0.00 0.00 0.00 4.35
344 349 2.452600 TAATGAAATGCAGGACCCCC 57.547 50.000 0.00 0.00 0.00 5.40
345 350 3.631250 TCTTAATGAAATGCAGGACCCC 58.369 45.455 0.00 0.00 0.00 4.95
346 351 4.949856 TCTTCTTAATGAAATGCAGGACCC 59.050 41.667 0.00 0.00 33.79 4.46
347 352 6.515272 TTCTTCTTAATGAAATGCAGGACC 57.485 37.500 0.00 0.00 33.79 4.46
348 353 8.299570 TCTTTTCTTCTTAATGAAATGCAGGAC 58.700 33.333 0.00 0.00 33.79 3.85
349 354 8.408043 TCTTTTCTTCTTAATGAAATGCAGGA 57.592 30.769 0.00 0.00 33.79 3.86
350 355 8.302438 ACTCTTTTCTTCTTAATGAAATGCAGG 58.698 33.333 0.00 0.00 33.79 4.85
351 356 9.688592 AACTCTTTTCTTCTTAATGAAATGCAG 57.311 29.630 0.00 0.00 33.79 4.41
352 357 9.467258 CAACTCTTTTCTTCTTAATGAAATGCA 57.533 29.630 0.00 0.00 33.79 3.96
353 358 8.919661 CCAACTCTTTTCTTCTTAATGAAATGC 58.080 33.333 0.00 0.00 33.79 3.56
354 359 9.971922 ACCAACTCTTTTCTTCTTAATGAAATG 57.028 29.630 0.00 0.00 33.79 2.32
356 361 8.630037 GGACCAACTCTTTTCTTCTTAATGAAA 58.370 33.333 0.00 0.00 33.79 2.69
357 362 7.777910 TGGACCAACTCTTTTCTTCTTAATGAA 59.222 33.333 0.00 0.00 0.00 2.57
358 363 7.287061 TGGACCAACTCTTTTCTTCTTAATGA 58.713 34.615 0.00 0.00 0.00 2.57
359 364 7.229506 ACTGGACCAACTCTTTTCTTCTTAATG 59.770 37.037 0.00 0.00 0.00 1.90
360 365 7.290813 ACTGGACCAACTCTTTTCTTCTTAAT 58.709 34.615 0.00 0.00 0.00 1.40
361 366 6.659824 ACTGGACCAACTCTTTTCTTCTTAA 58.340 36.000 0.00 0.00 0.00 1.85
362 367 6.248569 ACTGGACCAACTCTTTTCTTCTTA 57.751 37.500 0.00 0.00 0.00 2.10
363 368 5.117406 ACTGGACCAACTCTTTTCTTCTT 57.883 39.130 0.00 0.00 0.00 2.52
364 369 4.779993 ACTGGACCAACTCTTTTCTTCT 57.220 40.909 0.00 0.00 0.00 2.85
365 370 5.836821 AAACTGGACCAACTCTTTTCTTC 57.163 39.130 0.00 0.00 0.00 2.87
366 371 8.990163 TTATAAACTGGACCAACTCTTTTCTT 57.010 30.769 0.00 0.00 0.00 2.52
367 372 7.665974 CCTTATAAACTGGACCAACTCTTTTCT 59.334 37.037 0.00 0.00 0.00 2.52
368 373 7.664318 TCCTTATAAACTGGACCAACTCTTTTC 59.336 37.037 0.00 0.00 0.00 2.29
369 374 7.523415 TCCTTATAAACTGGACCAACTCTTTT 58.477 34.615 0.00 0.00 0.00 2.27
370 375 7.086685 TCCTTATAAACTGGACCAACTCTTT 57.913 36.000 0.00 0.00 0.00 2.52
371 376 6.697641 TCCTTATAAACTGGACCAACTCTT 57.302 37.500 0.00 0.00 0.00 2.85
372 377 6.697641 TTCCTTATAAACTGGACCAACTCT 57.302 37.500 0.00 0.00 0.00 3.24
373 378 7.309012 GGTTTTCCTTATAAACTGGACCAACTC 60.309 40.741 0.00 2.87 36.12 3.01
374 379 6.492429 GGTTTTCCTTATAAACTGGACCAACT 59.508 38.462 0.00 0.00 36.12 3.16
375 380 6.265876 TGGTTTTCCTTATAAACTGGACCAAC 59.734 38.462 0.00 6.26 41.38 3.77
376 381 6.374588 TGGTTTTCCTTATAAACTGGACCAA 58.625 36.000 0.00 0.00 41.38 3.67
377 382 5.954757 TGGTTTTCCTTATAAACTGGACCA 58.045 37.500 0.00 0.00 41.38 4.02
378 383 6.904463 TTGGTTTTCCTTATAAACTGGACC 57.096 37.500 0.00 0.00 41.38 4.46
379 384 7.149973 GGTTTGGTTTTCCTTATAAACTGGAC 58.850 38.462 0.00 0.00 41.38 4.02
380 385 6.268158 GGGTTTGGTTTTCCTTATAAACTGGA 59.732 38.462 0.00 0.00 41.38 3.86
381 386 6.460781 GGGTTTGGTTTTCCTTATAAACTGG 58.539 40.000 0.00 0.00 41.38 4.00
382 387 6.016108 TCGGGTTTGGTTTTCCTTATAAACTG 60.016 38.462 0.00 0.00 41.38 3.16
383 388 6.069994 TCGGGTTTGGTTTTCCTTATAAACT 58.930 36.000 0.00 0.00 41.38 2.66
384 389 6.330004 TCGGGTTTGGTTTTCCTTATAAAC 57.670 37.500 0.00 0.00 41.38 2.01
385 390 6.973460 TTCGGGTTTGGTTTTCCTTATAAA 57.027 33.333 0.00 0.00 41.38 1.40
386 391 6.973460 TTTCGGGTTTGGTTTTCCTTATAA 57.027 33.333 0.00 0.00 41.38 0.98
387 392 6.239261 GGTTTTCGGGTTTGGTTTTCCTTATA 60.239 38.462 0.00 0.00 41.38 0.98
388 393 5.453621 GGTTTTCGGGTTTGGTTTTCCTTAT 60.454 40.000 0.00 0.00 41.38 1.73
389 394 4.141981 GGTTTTCGGGTTTGGTTTTCCTTA 60.142 41.667 0.00 0.00 41.38 2.69
390 395 3.369681 GGTTTTCGGGTTTGGTTTTCCTT 60.370 43.478 0.00 0.00 41.38 3.36
391 396 2.168936 GGTTTTCGGGTTTGGTTTTCCT 59.831 45.455 0.00 0.00 41.38 3.36
392 397 2.168936 AGGTTTTCGGGTTTGGTTTTCC 59.831 45.455 0.00 0.00 41.14 3.13
393 398 3.530265 AGGTTTTCGGGTTTGGTTTTC 57.470 42.857 0.00 0.00 0.00 2.29
394 399 4.222366 TGTTAGGTTTTCGGGTTTGGTTTT 59.778 37.500 0.00 0.00 0.00 2.43
395 400 3.768215 TGTTAGGTTTTCGGGTTTGGTTT 59.232 39.130 0.00 0.00 0.00 3.27
396 401 3.363627 TGTTAGGTTTTCGGGTTTGGTT 58.636 40.909 0.00 0.00 0.00 3.67
397 402 3.015675 TGTTAGGTTTTCGGGTTTGGT 57.984 42.857 0.00 0.00 0.00 3.67
398 403 4.279922 AGATTGTTAGGTTTTCGGGTTTGG 59.720 41.667 0.00 0.00 0.00 3.28
399 404 5.447624 AGATTGTTAGGTTTTCGGGTTTG 57.552 39.130 0.00 0.00 0.00 2.93
400 405 4.214758 CGAGATTGTTAGGTTTTCGGGTTT 59.785 41.667 0.00 0.00 0.00 3.27
401 406 3.749609 CGAGATTGTTAGGTTTTCGGGTT 59.250 43.478 0.00 0.00 0.00 4.11
402 407 3.332034 CGAGATTGTTAGGTTTTCGGGT 58.668 45.455 0.00 0.00 0.00 5.28
403 408 2.676342 CCGAGATTGTTAGGTTTTCGGG 59.324 50.000 2.29 0.00 41.62 5.14
404 409 2.095372 GCCGAGATTGTTAGGTTTTCGG 59.905 50.000 5.71 5.71 46.43 4.30
405 410 3.000727 AGCCGAGATTGTTAGGTTTTCG 58.999 45.455 0.00 0.00 0.00 3.46
406 411 6.315393 TGAATAGCCGAGATTGTTAGGTTTTC 59.685 38.462 0.00 0.00 0.00 2.29
407 412 6.177610 TGAATAGCCGAGATTGTTAGGTTTT 58.822 36.000 0.00 0.00 0.00 2.43
408 413 5.741011 TGAATAGCCGAGATTGTTAGGTTT 58.259 37.500 0.00 0.00 0.00 3.27
409 414 5.128827 TCTGAATAGCCGAGATTGTTAGGTT 59.871 40.000 0.00 0.00 0.00 3.50
410 415 4.649674 TCTGAATAGCCGAGATTGTTAGGT 59.350 41.667 0.00 0.00 0.00 3.08
411 416 5.010112 TCTCTGAATAGCCGAGATTGTTAGG 59.990 44.000 0.00 0.00 0.00 2.69
412 417 6.078202 TCTCTGAATAGCCGAGATTGTTAG 57.922 41.667 0.00 0.00 0.00 2.34
413 418 6.096987 AGTTCTCTGAATAGCCGAGATTGTTA 59.903 38.462 0.00 0.00 34.13 2.41
414 419 5.105146 AGTTCTCTGAATAGCCGAGATTGTT 60.105 40.000 0.00 0.00 34.13 2.83
415 420 4.404073 AGTTCTCTGAATAGCCGAGATTGT 59.596 41.667 0.00 0.00 34.13 2.71
416 421 4.942852 AGTTCTCTGAATAGCCGAGATTG 58.057 43.478 0.00 0.00 34.13 2.67
417 422 5.606348 AAGTTCTCTGAATAGCCGAGATT 57.394 39.130 0.00 0.00 34.13 2.40
418 423 6.909550 ATAAGTTCTCTGAATAGCCGAGAT 57.090 37.500 0.00 0.00 34.13 2.75
419 424 7.818997 TTATAAGTTCTCTGAATAGCCGAGA 57.181 36.000 0.00 0.00 32.36 4.04
420 425 9.482627 AAATTATAAGTTCTCTGAATAGCCGAG 57.517 33.333 0.00 0.00 0.00 4.63
421 426 9.261180 CAAATTATAAGTTCTCTGAATAGCCGA 57.739 33.333 0.00 0.00 0.00 5.54
422 427 9.261180 TCAAATTATAAGTTCTCTGAATAGCCG 57.739 33.333 0.00 0.00 0.00 5.52
472 477 8.531146 ACATTCCAATAAAGGGTTATGAACTTG 58.469 33.333 0.00 0.00 30.04 3.16
506 511 2.035321 GCACCCGACCAATTTGAAAGAA 59.965 45.455 0.00 0.00 0.00 2.52
508 513 1.613437 AGCACCCGACCAATTTGAAAG 59.387 47.619 0.00 0.00 0.00 2.62
521 529 5.354234 CCAGCCTAATAATAATAAGCACCCG 59.646 44.000 0.00 0.00 0.00 5.28
540 548 1.379044 CTCCCCATTGTGACCAGCC 60.379 63.158 0.00 0.00 0.00 4.85
542 550 0.698238 TTCCTCCCCATTGTGACCAG 59.302 55.000 0.00 0.00 0.00 4.00
543 551 0.404040 GTTCCTCCCCATTGTGACCA 59.596 55.000 0.00 0.00 0.00 4.02
544 552 0.698818 AGTTCCTCCCCATTGTGACC 59.301 55.000 0.00 0.00 0.00 4.02
545 553 2.586648 AAGTTCCTCCCCATTGTGAC 57.413 50.000 0.00 0.00 0.00 3.67
546 554 3.526899 TCTAAGTTCCTCCCCATTGTGA 58.473 45.455 0.00 0.00 0.00 3.58
547 555 4.263506 ACTTCTAAGTTCCTCCCCATTGTG 60.264 45.833 0.00 0.00 35.21 3.33
548 556 3.916989 ACTTCTAAGTTCCTCCCCATTGT 59.083 43.478 0.00 0.00 35.21 2.71
549 557 4.576330 ACTTCTAAGTTCCTCCCCATTG 57.424 45.455 0.00 0.00 35.21 2.82
550 558 5.550403 TGTTACTTCTAAGTTCCTCCCCATT 59.450 40.000 0.00 0.00 40.37 3.16
551 559 5.098663 TGTTACTTCTAAGTTCCTCCCCAT 58.901 41.667 0.00 0.00 40.37 4.00
552 560 4.495565 TGTTACTTCTAAGTTCCTCCCCA 58.504 43.478 0.00 0.00 40.37 4.96
553 561 5.189145 TGATGTTACTTCTAAGTTCCTCCCC 59.811 44.000 0.00 0.00 40.37 4.81
554 562 6.107343 GTGATGTTACTTCTAAGTTCCTCCC 58.893 44.000 0.00 0.00 40.37 4.30
555 563 6.590677 GTGTGATGTTACTTCTAAGTTCCTCC 59.409 42.308 0.00 0.00 40.37 4.30
556 564 7.116519 GTGTGTGATGTTACTTCTAAGTTCCTC 59.883 40.741 0.00 0.01 40.37 3.71
557 565 6.929606 GTGTGTGATGTTACTTCTAAGTTCCT 59.070 38.462 0.00 0.00 40.37 3.36
558 566 6.929606 AGTGTGTGATGTTACTTCTAAGTTCC 59.070 38.462 0.00 0.00 40.37 3.62
559 567 7.948278 AGTGTGTGATGTTACTTCTAAGTTC 57.052 36.000 0.00 0.00 40.37 3.01
560 568 7.985184 TGAAGTGTGTGATGTTACTTCTAAGTT 59.015 33.333 14.63 0.00 45.63 2.66
561 569 7.497595 TGAAGTGTGTGATGTTACTTCTAAGT 58.502 34.615 14.63 0.39 45.63 2.24
562 570 7.946655 TGAAGTGTGTGATGTTACTTCTAAG 57.053 36.000 14.63 0.00 45.63 2.18
563 571 8.902540 ATTGAAGTGTGTGATGTTACTTCTAA 57.097 30.769 14.63 9.16 45.63 2.10
564 572 9.419297 GTATTGAAGTGTGTGATGTTACTTCTA 57.581 33.333 14.63 9.22 45.63 2.10
565 573 7.931407 TGTATTGAAGTGTGTGATGTTACTTCT 59.069 33.333 14.63 1.74 45.63 2.85
566 574 8.083462 TGTATTGAAGTGTGTGATGTTACTTC 57.917 34.615 0.00 0.00 45.64 3.01
567 575 8.342634 GTTGTATTGAAGTGTGTGATGTTACTT 58.657 33.333 0.00 0.00 36.18 2.24
568 576 7.715249 AGTTGTATTGAAGTGTGTGATGTTACT 59.285 33.333 0.00 0.00 0.00 2.24
569 577 7.861630 AGTTGTATTGAAGTGTGTGATGTTAC 58.138 34.615 0.00 0.00 0.00 2.50
570 578 8.445275 AAGTTGTATTGAAGTGTGTGATGTTA 57.555 30.769 0.00 0.00 0.00 2.41
571 579 6.942532 AGTTGTATTGAAGTGTGTGATGTT 57.057 33.333 0.00 0.00 0.00 2.71
572 580 6.942532 AAGTTGTATTGAAGTGTGTGATGT 57.057 33.333 0.00 0.00 0.00 3.06
573 581 6.142798 GCAAAGTTGTATTGAAGTGTGTGATG 59.857 38.462 0.00 0.00 0.00 3.07
574 582 6.039717 AGCAAAGTTGTATTGAAGTGTGTGAT 59.960 34.615 0.00 0.00 0.00 3.06
575 583 5.356751 AGCAAAGTTGTATTGAAGTGTGTGA 59.643 36.000 0.00 0.00 0.00 3.58
576 584 5.581605 AGCAAAGTTGTATTGAAGTGTGTG 58.418 37.500 0.00 0.00 0.00 3.82
577 585 5.835113 AGCAAAGTTGTATTGAAGTGTGT 57.165 34.783 0.00 0.00 0.00 3.72
578 586 7.862372 ACATAAGCAAAGTTGTATTGAAGTGTG 59.138 33.333 0.00 0.00 0.00 3.82
579 587 7.862372 CACATAAGCAAAGTTGTATTGAAGTGT 59.138 33.333 0.00 0.00 0.00 3.55
580 588 7.326789 CCACATAAGCAAAGTTGTATTGAAGTG 59.673 37.037 0.00 0.00 0.00 3.16
581 589 7.370383 CCACATAAGCAAAGTTGTATTGAAGT 58.630 34.615 0.00 0.00 0.00 3.01
582 590 6.308766 GCCACATAAGCAAAGTTGTATTGAAG 59.691 38.462 0.00 0.00 0.00 3.02
583 591 6.155827 GCCACATAAGCAAAGTTGTATTGAA 58.844 36.000 0.00 0.00 0.00 2.69
584 592 5.242615 TGCCACATAAGCAAAGTTGTATTGA 59.757 36.000 0.00 0.00 37.28 2.57
585 593 5.345741 GTGCCACATAAGCAAAGTTGTATTG 59.654 40.000 0.00 0.00 43.02 1.90
586 594 5.010516 TGTGCCACATAAGCAAAGTTGTATT 59.989 36.000 0.00 0.00 43.02 1.89
587 595 4.522405 TGTGCCACATAAGCAAAGTTGTAT 59.478 37.500 0.00 0.00 43.02 2.29
588 596 3.885901 TGTGCCACATAAGCAAAGTTGTA 59.114 39.130 0.00 0.00 43.02 2.41
589 597 2.692557 TGTGCCACATAAGCAAAGTTGT 59.307 40.909 0.00 0.00 43.02 3.32
590 598 3.367992 TGTGCCACATAAGCAAAGTTG 57.632 42.857 0.00 0.00 43.02 3.16
591 599 5.920193 ATATGTGCCACATAAGCAAAGTT 57.080 34.783 20.57 0.00 43.50 2.66
592 600 5.920193 AATATGTGCCACATAAGCAAAGT 57.080 34.783 20.57 0.54 43.50 2.66
593 601 8.757789 CATTAAATATGTGCCACATAAGCAAAG 58.242 33.333 20.57 8.50 43.50 2.77
594 602 8.473219 TCATTAAATATGTGCCACATAAGCAAA 58.527 29.630 20.57 12.83 43.50 3.68
595 603 8.005192 TCATTAAATATGTGCCACATAAGCAA 57.995 30.769 20.57 14.07 43.50 3.91
596 604 7.579761 TCATTAAATATGTGCCACATAAGCA 57.420 32.000 20.57 6.59 43.50 3.91
597 605 8.352201 TCTTCATTAAATATGTGCCACATAAGC 58.648 33.333 20.57 0.00 43.50 3.09
598 606 9.888878 CTCTTCATTAAATATGTGCCACATAAG 57.111 33.333 20.57 12.73 43.50 1.73
599 607 9.625747 TCTCTTCATTAAATATGTGCCACATAA 57.374 29.630 20.57 7.37 43.50 1.90
600 608 9.276590 CTCTCTTCATTAAATATGTGCCACATA 57.723 33.333 19.16 19.16 44.29 2.29
601 609 7.994911 TCTCTCTTCATTAAATATGTGCCACAT 59.005 33.333 15.69 15.69 42.35 3.21
602 610 7.337938 TCTCTCTTCATTAAATATGTGCCACA 58.662 34.615 0.00 0.00 0.00 4.17
603 611 7.041508 CCTCTCTCTTCATTAAATATGTGCCAC 60.042 40.741 0.00 0.00 0.00 5.01
604 612 6.994496 CCTCTCTCTTCATTAAATATGTGCCA 59.006 38.462 0.00 0.00 0.00 4.92
605 613 6.995091 ACCTCTCTCTTCATTAAATATGTGCC 59.005 38.462 0.00 0.00 0.00 5.01
606 614 7.519649 GCACCTCTCTCTTCATTAAATATGTGC 60.520 40.741 0.00 0.00 35.67 4.57
607 615 7.714377 AGCACCTCTCTCTTCATTAAATATGTG 59.286 37.037 0.00 0.00 0.00 3.21
608 616 7.800092 AGCACCTCTCTCTTCATTAAATATGT 58.200 34.615 0.00 0.00 0.00 2.29
609 617 8.557864 CAAGCACCTCTCTCTTCATTAAATATG 58.442 37.037 0.00 0.00 0.00 1.78
610 618 8.270744 ACAAGCACCTCTCTCTTCATTAAATAT 58.729 33.333 0.00 0.00 0.00 1.28
611 619 7.550551 CACAAGCACCTCTCTCTTCATTAAATA 59.449 37.037 0.00 0.00 0.00 1.40
612 620 6.373774 CACAAGCACCTCTCTCTTCATTAAAT 59.626 38.462 0.00 0.00 0.00 1.40
613 621 5.702670 CACAAGCACCTCTCTCTTCATTAAA 59.297 40.000 0.00 0.00 0.00 1.52
614 622 5.240891 CACAAGCACCTCTCTCTTCATTAA 58.759 41.667 0.00 0.00 0.00 1.40
615 623 4.323028 CCACAAGCACCTCTCTCTTCATTA 60.323 45.833 0.00 0.00 0.00 1.90
616 624 3.558746 CCACAAGCACCTCTCTCTTCATT 60.559 47.826 0.00 0.00 0.00 2.57
617 625 2.027377 CCACAAGCACCTCTCTCTTCAT 60.027 50.000 0.00 0.00 0.00 2.57
618 626 1.345741 CCACAAGCACCTCTCTCTTCA 59.654 52.381 0.00 0.00 0.00 3.02
619 627 1.346068 ACCACAAGCACCTCTCTCTTC 59.654 52.381 0.00 0.00 0.00 2.87
620 628 1.428869 ACCACAAGCACCTCTCTCTT 58.571 50.000 0.00 0.00 0.00 2.85
621 629 2.300437 GTTACCACAAGCACCTCTCTCT 59.700 50.000 0.00 0.00 0.00 3.10
622 630 2.300437 AGTTACCACAAGCACCTCTCTC 59.700 50.000 0.00 0.00 0.00 3.20
623 631 2.330216 AGTTACCACAAGCACCTCTCT 58.670 47.619 0.00 0.00 0.00 3.10
624 632 2.841442 AGTTACCACAAGCACCTCTC 57.159 50.000 0.00 0.00 0.00 3.20
625 633 2.028020 GCTAGTTACCACAAGCACCTCT 60.028 50.000 0.00 0.00 35.05 3.69
626 634 2.028020 AGCTAGTTACCACAAGCACCTC 60.028 50.000 0.00 0.00 37.44 3.85
627 635 1.978580 AGCTAGTTACCACAAGCACCT 59.021 47.619 0.00 0.00 37.44 4.00
628 636 2.474410 AGCTAGTTACCACAAGCACC 57.526 50.000 0.00 0.00 37.44 5.01
629 637 4.566987 ACTTAGCTAGTTACCACAAGCAC 58.433 43.478 0.00 0.00 37.44 4.40
630 638 4.884668 ACTTAGCTAGTTACCACAAGCA 57.115 40.909 0.00 0.00 37.44 3.91
639 647 6.377996 TGATGTTCCGGTAACTTAGCTAGTTA 59.622 38.462 0.00 10.09 45.22 2.24
641 649 4.708421 TGATGTTCCGGTAACTTAGCTAGT 59.292 41.667 0.00 0.00 38.99 2.57
642 650 5.041940 GTGATGTTCCGGTAACTTAGCTAG 58.958 45.833 0.00 0.00 38.99 3.42
643 651 4.463539 TGTGATGTTCCGGTAACTTAGCTA 59.536 41.667 0.00 0.00 38.99 3.32
644 652 3.259876 TGTGATGTTCCGGTAACTTAGCT 59.740 43.478 0.00 0.00 38.99 3.32
645 653 3.370061 GTGTGATGTTCCGGTAACTTAGC 59.630 47.826 0.00 0.00 38.99 3.09
646 654 4.387862 GTGTGTGATGTTCCGGTAACTTAG 59.612 45.833 0.00 0.00 38.99 2.18
647 655 4.039488 AGTGTGTGATGTTCCGGTAACTTA 59.961 41.667 0.00 0.00 38.99 2.24
648 656 3.135994 GTGTGTGATGTTCCGGTAACTT 58.864 45.455 0.00 3.15 38.99 2.66
649 657 2.367567 AGTGTGTGATGTTCCGGTAACT 59.632 45.455 0.00 0.00 38.99 2.24
650 658 2.735134 GAGTGTGTGATGTTCCGGTAAC 59.265 50.000 0.00 5.56 38.67 2.50
651 659 2.289195 GGAGTGTGTGATGTTCCGGTAA 60.289 50.000 0.00 0.00 0.00 2.85
652 660 1.274167 GGAGTGTGTGATGTTCCGGTA 59.726 52.381 0.00 0.00 0.00 4.02
653 661 0.034896 GGAGTGTGTGATGTTCCGGT 59.965 55.000 0.00 0.00 0.00 5.28
654 662 0.034756 TGGAGTGTGTGATGTTCCGG 59.965 55.000 0.00 0.00 0.00 5.14
655 663 1.800586 CTTGGAGTGTGTGATGTTCCG 59.199 52.381 0.00 0.00 0.00 4.30
656 664 3.126001 TCTTGGAGTGTGTGATGTTCC 57.874 47.619 0.00 0.00 0.00 3.62
657 665 4.335315 TGTTTCTTGGAGTGTGTGATGTTC 59.665 41.667 0.00 0.00 0.00 3.18
658 666 4.269183 TGTTTCTTGGAGTGTGTGATGTT 58.731 39.130 0.00 0.00 0.00 2.71
659 667 3.884895 TGTTTCTTGGAGTGTGTGATGT 58.115 40.909 0.00 0.00 0.00 3.06
660 668 4.898829 TTGTTTCTTGGAGTGTGTGATG 57.101 40.909 0.00 0.00 0.00 3.07
661 669 5.132502 TCATTGTTTCTTGGAGTGTGTGAT 58.867 37.500 0.00 0.00 0.00 3.06
662 670 4.522114 TCATTGTTTCTTGGAGTGTGTGA 58.478 39.130 0.00 0.00 0.00 3.58
663 671 4.336433 ACTCATTGTTTCTTGGAGTGTGTG 59.664 41.667 0.00 0.00 37.43 3.82
664 672 4.526970 ACTCATTGTTTCTTGGAGTGTGT 58.473 39.130 0.00 0.00 37.43 3.72
665 673 4.818546 AGACTCATTGTTTCTTGGAGTGTG 59.181 41.667 0.00 0.00 38.82 3.82
666 674 5.041191 AGACTCATTGTTTCTTGGAGTGT 57.959 39.130 0.00 0.00 38.82 3.55
667 675 8.660373 GTTATAGACTCATTGTTTCTTGGAGTG 58.340 37.037 0.00 0.00 38.82 3.51
668 676 7.824779 GGTTATAGACTCATTGTTTCTTGGAGT 59.175 37.037 0.00 0.00 41.22 3.85
669 677 8.043710 AGGTTATAGACTCATTGTTTCTTGGAG 58.956 37.037 0.00 0.00 0.00 3.86
670 678 7.918076 AGGTTATAGACTCATTGTTTCTTGGA 58.082 34.615 0.00 0.00 0.00 3.53
671 679 9.667107 TTAGGTTATAGACTCATTGTTTCTTGG 57.333 33.333 0.00 0.00 0.00 3.61
691 699 9.801873 GTCATGCAACAATGTATTTATTAGGTT 57.198 29.630 0.00 0.00 28.42 3.50
692 700 8.965819 TGTCATGCAACAATGTATTTATTAGGT 58.034 29.630 0.00 0.00 28.42 3.08
693 701 9.236691 GTGTCATGCAACAATGTATTTATTAGG 57.763 33.333 0.00 0.00 28.42 2.69
696 704 9.787532 GTAGTGTCATGCAACAATGTATTTATT 57.212 29.630 1.88 0.00 28.42 1.40
697 705 8.955388 TGTAGTGTCATGCAACAATGTATTTAT 58.045 29.630 1.88 0.00 28.42 1.40
698 706 8.329203 TGTAGTGTCATGCAACAATGTATTTA 57.671 30.769 1.88 0.00 28.42 1.40
699 707 7.213216 TGTAGTGTCATGCAACAATGTATTT 57.787 32.000 1.88 0.00 28.42 1.40
700 708 6.816134 TGTAGTGTCATGCAACAATGTATT 57.184 33.333 1.88 0.00 28.42 1.89
701 709 7.986889 TCTATGTAGTGTCATGCAACAATGTAT 59.013 33.333 1.88 0.00 31.41 2.29
702 710 7.327214 TCTATGTAGTGTCATGCAACAATGTA 58.673 34.615 1.88 0.00 0.00 2.29
703 711 6.172630 TCTATGTAGTGTCATGCAACAATGT 58.827 36.000 1.88 0.00 0.00 2.71
704 712 6.667007 TCTATGTAGTGTCATGCAACAATG 57.333 37.500 1.88 0.00 0.00 2.82
705 713 6.825213 ACATCTATGTAGTGTCATGCAACAAT 59.175 34.615 0.00 0.00 39.68 2.71
706 714 6.172630 ACATCTATGTAGTGTCATGCAACAA 58.827 36.000 0.00 0.00 39.68 2.83
707 715 5.733676 ACATCTATGTAGTGTCATGCAACA 58.266 37.500 0.00 0.00 39.68 3.33
708 716 6.238211 GGAACATCTATGTAGTGTCATGCAAC 60.238 42.308 0.00 0.00 40.80 4.17
709 717 5.817296 GGAACATCTATGTAGTGTCATGCAA 59.183 40.000 0.00 0.00 40.80 4.08
710 718 5.129320 AGGAACATCTATGTAGTGTCATGCA 59.871 40.000 0.00 0.00 40.80 3.96
711 719 5.605534 AGGAACATCTATGTAGTGTCATGC 58.394 41.667 0.00 0.00 40.80 4.06
712 720 7.148641 GGTAGGAACATCTATGTAGTGTCATG 58.851 42.308 0.00 0.00 40.80 3.07
713 721 6.267928 GGGTAGGAACATCTATGTAGTGTCAT 59.732 42.308 0.00 0.00 40.80 3.06
714 722 5.597182 GGGTAGGAACATCTATGTAGTGTCA 59.403 44.000 0.00 0.00 40.80 3.58
715 723 5.597182 TGGGTAGGAACATCTATGTAGTGTC 59.403 44.000 0.00 0.00 40.80 3.67
716 724 5.363005 GTGGGTAGGAACATCTATGTAGTGT 59.637 44.000 0.00 0.00 40.80 3.55
717 725 5.598830 AGTGGGTAGGAACATCTATGTAGTG 59.401 44.000 0.00 0.00 40.80 2.74
718 726 5.778542 AGTGGGTAGGAACATCTATGTAGT 58.221 41.667 0.00 0.00 40.80 2.73
719 727 7.670140 TCATAGTGGGTAGGAACATCTATGTAG 59.330 40.741 0.00 0.00 40.80 2.74
720 728 7.532199 TCATAGTGGGTAGGAACATCTATGTA 58.468 38.462 0.00 0.00 40.80 2.29
721 729 6.382087 TCATAGTGGGTAGGAACATCTATGT 58.618 40.000 0.00 0.00 44.20 2.29
722 730 6.918067 TCATAGTGGGTAGGAACATCTATG 57.082 41.667 0.00 0.00 35.64 2.23
723 731 7.306013 TCTTCATAGTGGGTAGGAACATCTAT 58.694 38.462 0.00 0.00 28.58 1.98
724 732 6.679542 TCTTCATAGTGGGTAGGAACATCTA 58.320 40.000 0.00 0.00 28.58 1.98
725 733 5.529289 TCTTCATAGTGGGTAGGAACATCT 58.471 41.667 0.00 0.00 28.58 2.90
726 734 5.871396 TCTTCATAGTGGGTAGGAACATC 57.129 43.478 0.00 0.00 28.58 3.06
727 735 5.072329 CCATCTTCATAGTGGGTAGGAACAT 59.928 44.000 0.00 0.00 28.58 2.71
728 736 4.408921 CCATCTTCATAGTGGGTAGGAACA 59.591 45.833 0.00 0.00 28.58 3.18
729 737 4.409247 ACCATCTTCATAGTGGGTAGGAAC 59.591 45.833 0.00 0.00 37.33 3.62
730 738 4.631234 ACCATCTTCATAGTGGGTAGGAA 58.369 43.478 0.00 0.00 37.33 3.36
731 739 4.280789 ACCATCTTCATAGTGGGTAGGA 57.719 45.455 0.00 0.00 37.33 2.94
732 740 5.365605 TGTTACCATCTTCATAGTGGGTAGG 59.634 44.000 0.00 0.00 37.33 3.18
733 741 6.479972 TGTTACCATCTTCATAGTGGGTAG 57.520 41.667 0.00 0.00 37.33 3.18
734 742 7.787904 ACTATGTTACCATCTTCATAGTGGGTA 59.212 37.037 13.45 0.00 45.91 3.69
735 743 5.975988 ATGTTACCATCTTCATAGTGGGT 57.024 39.130 0.00 0.00 37.33 4.51
736 744 7.015682 AGACTATGTTACCATCTTCATAGTGGG 59.984 40.741 17.43 0.00 46.89 4.61
737 745 7.957002 AGACTATGTTACCATCTTCATAGTGG 58.043 38.462 17.43 0.00 46.89 4.00
740 748 8.744652 CCCTAGACTATGTTACCATCTTCATAG 58.255 40.741 8.77 8.77 42.80 2.23
741 749 8.453681 TCCCTAGACTATGTTACCATCTTCATA 58.546 37.037 0.00 0.00 32.29 2.15
742 750 7.306013 TCCCTAGACTATGTTACCATCTTCAT 58.694 38.462 0.00 0.00 32.29 2.57
743 751 6.679542 TCCCTAGACTATGTTACCATCTTCA 58.320 40.000 0.00 0.00 32.29 3.02
744 752 7.288158 ACTTCCCTAGACTATGTTACCATCTTC 59.712 40.741 0.00 0.00 32.29 2.87
745 753 7.070074 CACTTCCCTAGACTATGTTACCATCTT 59.930 40.741 0.00 0.00 32.29 2.40
746 754 6.551601 CACTTCCCTAGACTATGTTACCATCT 59.448 42.308 0.00 0.00 32.29 2.90
747 755 6.324254 ACACTTCCCTAGACTATGTTACCATC 59.676 42.308 0.00 0.00 32.29 3.51
748 756 6.098409 CACACTTCCCTAGACTATGTTACCAT 59.902 42.308 0.00 0.00 34.97 3.55
749 757 5.421056 CACACTTCCCTAGACTATGTTACCA 59.579 44.000 0.00 0.00 0.00 3.25
750 758 5.421374 ACACACTTCCCTAGACTATGTTACC 59.579 44.000 0.00 0.00 0.00 2.85
751 759 6.527057 ACACACTTCCCTAGACTATGTTAC 57.473 41.667 0.00 0.00 0.00 2.50
752 760 8.654485 TTTACACACTTCCCTAGACTATGTTA 57.346 34.615 0.00 0.00 0.00 2.41
753 761 7.549147 TTTACACACTTCCCTAGACTATGTT 57.451 36.000 0.00 0.00 0.00 2.71
754 762 7.735326 ATTTACACACTTCCCTAGACTATGT 57.265 36.000 0.00 0.00 0.00 2.29
755 763 9.530633 GTAATTTACACACTTCCCTAGACTATG 57.469 37.037 1.62 0.00 0.00 2.23
756 764 9.490083 AGTAATTTACACACTTCCCTAGACTAT 57.510 33.333 9.15 0.00 0.00 2.12
757 765 8.890410 AGTAATTTACACACTTCCCTAGACTA 57.110 34.615 9.15 0.00 0.00 2.59
758 766 7.793948 AGTAATTTACACACTTCCCTAGACT 57.206 36.000 9.15 0.00 0.00 3.24
759 767 7.705752 GCTAGTAATTTACACACTTCCCTAGAC 59.294 40.741 9.15 0.00 0.00 2.59
760 768 7.618512 AGCTAGTAATTTACACACTTCCCTAGA 59.381 37.037 9.15 0.00 0.00 2.43
761 769 7.783042 AGCTAGTAATTTACACACTTCCCTAG 58.217 38.462 9.15 0.00 0.00 3.02
762 770 7.729124 AGCTAGTAATTTACACACTTCCCTA 57.271 36.000 9.15 0.00 0.00 3.53
763 771 6.622427 AGCTAGTAATTTACACACTTCCCT 57.378 37.500 9.15 0.00 0.00 4.20
764 772 8.827677 CATAAGCTAGTAATTTACACACTTCCC 58.172 37.037 9.15 0.00 0.00 3.97
765 773 9.379791 ACATAAGCTAGTAATTTACACACTTCC 57.620 33.333 9.15 0.00 0.00 3.46
771 779 9.704098 GCAAGAACATAAGCTAGTAATTTACAC 57.296 33.333 9.15 0.00 0.00 2.90
772 780 8.889717 GGCAAGAACATAAGCTAGTAATTTACA 58.110 33.333 9.15 0.00 0.00 2.41
773 781 8.343366 GGGCAAGAACATAAGCTAGTAATTTAC 58.657 37.037 0.00 0.00 0.00 2.01
774 782 8.050325 TGGGCAAGAACATAAGCTAGTAATTTA 58.950 33.333 0.00 0.00 0.00 1.40
775 783 6.889722 TGGGCAAGAACATAAGCTAGTAATTT 59.110 34.615 0.00 0.00 0.00 1.82
776 784 6.423182 TGGGCAAGAACATAAGCTAGTAATT 58.577 36.000 0.00 0.00 0.00 1.40
777 785 6.001449 TGGGCAAGAACATAAGCTAGTAAT 57.999 37.500 0.00 0.00 0.00 1.89
778 786 5.429681 TGGGCAAGAACATAAGCTAGTAA 57.570 39.130 0.00 0.00 0.00 2.24
779 787 5.630415 ATGGGCAAGAACATAAGCTAGTA 57.370 39.130 0.00 0.00 0.00 1.82
780 788 4.510167 ATGGGCAAGAACATAAGCTAGT 57.490 40.909 0.00 0.00 0.00 2.57
781 789 6.712095 TCATAATGGGCAAGAACATAAGCTAG 59.288 38.462 0.00 0.00 0.00 3.42
782 790 6.486657 GTCATAATGGGCAAGAACATAAGCTA 59.513 38.462 0.00 0.00 0.00 3.32
783 791 5.300286 GTCATAATGGGCAAGAACATAAGCT 59.700 40.000 0.00 0.00 0.00 3.74
784 792 5.507985 GGTCATAATGGGCAAGAACATAAGC 60.508 44.000 0.00 0.00 0.00 3.09
785 793 5.593909 TGGTCATAATGGGCAAGAACATAAG 59.406 40.000 0.00 0.00 0.00 1.73
786 794 5.514169 TGGTCATAATGGGCAAGAACATAA 58.486 37.500 0.00 0.00 0.00 1.90
787 795 5.122707 TGGTCATAATGGGCAAGAACATA 57.877 39.130 0.00 0.00 0.00 2.29
788 796 3.956199 CTGGTCATAATGGGCAAGAACAT 59.044 43.478 0.00 0.00 0.00 2.71
789 797 3.355378 CTGGTCATAATGGGCAAGAACA 58.645 45.455 0.00 0.00 0.00 3.18
790 798 2.099756 GCTGGTCATAATGGGCAAGAAC 59.900 50.000 0.00 0.00 0.00 3.01
791 799 2.378038 GCTGGTCATAATGGGCAAGAA 58.622 47.619 0.00 0.00 0.00 2.52
792 800 1.410083 GGCTGGTCATAATGGGCAAGA 60.410 52.381 0.00 0.00 0.00 3.02
793 801 1.035139 GGCTGGTCATAATGGGCAAG 58.965 55.000 0.00 0.00 0.00 4.01
794 802 0.630673 AGGCTGGTCATAATGGGCAA 59.369 50.000 0.00 0.00 0.00 4.52
795 803 0.630673 AAGGCTGGTCATAATGGGCA 59.369 50.000 0.00 0.00 0.00 5.36
796 804 2.508526 CTAAGGCTGGTCATAATGGGC 58.491 52.381 0.00 0.00 0.00 5.36
797 805 2.508526 GCTAAGGCTGGTCATAATGGG 58.491 52.381 0.00 0.00 35.22 4.00
798 806 2.508526 GGCTAAGGCTGGTCATAATGG 58.491 52.381 0.00 0.00 38.73 3.16
799 807 2.146342 CGGCTAAGGCTGGTCATAATG 58.854 52.381 0.00 0.00 40.90 1.90
800 808 1.543429 GCGGCTAAGGCTGGTCATAAT 60.543 52.381 0.00 0.00 44.48 1.28
801 809 0.179056 GCGGCTAAGGCTGGTCATAA 60.179 55.000 0.00 0.00 44.48 1.90
802 810 1.445942 GCGGCTAAGGCTGGTCATA 59.554 57.895 0.00 0.00 44.48 2.15
803 811 2.190578 GCGGCTAAGGCTGGTCAT 59.809 61.111 0.00 0.00 44.48 3.06
809 817 0.955919 GAACAACAGCGGCTAAGGCT 60.956 55.000 0.26 0.00 42.61 4.58
810 818 1.234615 TGAACAACAGCGGCTAAGGC 61.235 55.000 0.26 0.00 37.82 4.35
811 819 0.517316 GTGAACAACAGCGGCTAAGG 59.483 55.000 0.26 0.00 0.00 2.69
812 820 0.163788 CGTGAACAACAGCGGCTAAG 59.836 55.000 0.26 0.00 0.00 2.18
917 944 2.124903 CGACGTTCGATATCCCTTTGG 58.875 52.381 0.00 0.00 43.74 3.28
971 1274 0.038159 GCTAATCGATCCCGTGGAGG 60.038 60.000 0.00 0.00 34.05 4.30
992 1295 2.012673 CCTTTGTGTCCATGCTAGCTC 58.987 52.381 17.23 2.26 0.00 4.09
1104 1407 2.388232 GGACCACGACGTTGGCATC 61.388 63.158 7.28 1.00 40.77 3.91
1118 1421 2.300996 TCCAGCTTCATGGAGGACC 58.699 57.895 2.40 0.00 44.56 4.46
1124 1442 1.153289 CCGTCCTCCAGCTTCATGG 60.153 63.158 0.00 0.00 42.11 3.66
1128 1446 4.070552 ACGCCGTCCTCCAGCTTC 62.071 66.667 0.00 0.00 0.00 3.86
1150 1468 4.554363 CGAATCCGCGAGCTCCGT 62.554 66.667 8.23 5.26 41.15 4.69
1159 1477 2.960129 CACCGTAGCCGAATCCGC 60.960 66.667 0.00 0.00 35.63 5.54
1160 1478 2.279252 CCACCGTAGCCGAATCCG 60.279 66.667 0.00 0.00 35.63 4.18
1168 1486 2.722201 CCTCCAGGTCCACCGTAGC 61.722 68.421 0.00 0.00 42.08 3.58
1170 1488 2.038329 CCCTCCAGGTCCACCGTA 59.962 66.667 0.00 0.00 42.08 4.02
1227 1545 0.251341 CCTTGTTGGGGTTCAGGGAG 60.251 60.000 0.00 0.00 33.50 4.30
1347 1665 1.239968 GGTTGGAGCAACAGCCTCAG 61.240 60.000 6.34 0.00 45.11 3.35
1357 1675 2.069776 CAGGAAGGAGGTTGGAGCA 58.930 57.895 0.00 0.00 0.00 4.26
1386 1704 2.274232 TAACACTGATCGGACGGGCG 62.274 60.000 9.00 0.00 0.00 6.13
1418 1736 1.967066 ACACGGGCAAAATGGAAATGA 59.033 42.857 0.00 0.00 0.00 2.57
1426 1744 1.069771 CGTAAACGACACGGGCAAAAT 60.070 47.619 0.00 0.00 43.02 1.82
1444 1762 2.035449 TCAAGAAACCTGACACGATCGT 59.965 45.455 16.60 16.60 0.00 3.73
1452 1770 5.527033 ACGTACTACTTCAAGAAACCTGAC 58.473 41.667 0.00 0.00 0.00 3.51
1456 1774 9.631452 AAGTTATACGTACTACTTCAAGAAACC 57.369 33.333 14.97 0.00 0.00 3.27
1468 1786 4.731720 TGCGTGCAAAGTTATACGTACTA 58.268 39.130 0.00 0.00 38.67 1.82
1469 1787 3.577667 TGCGTGCAAAGTTATACGTACT 58.422 40.909 0.00 0.00 38.67 2.73
1470 1788 3.365820 ACTGCGTGCAAAGTTATACGTAC 59.634 43.478 0.00 0.00 38.67 3.67
1570 1888 6.079712 ACTCCCAGTCTTTAATAATGGCTT 57.920 37.500 0.50 0.00 0.00 4.35
1578 1896 9.981460 ATTCTGATTAAACTCCCAGTCTTTAAT 57.019 29.630 0.00 0.00 28.90 1.40
1584 1902 7.201741 GGCTTTATTCTGATTAAACTCCCAGTC 60.202 40.741 1.69 0.00 0.00 3.51
1594 1912 3.537580 ACGCGGGCTTTATTCTGATTAA 58.462 40.909 12.47 0.00 0.00 1.40
1621 1940 6.874134 ACACTACTATCAAATGTGTTGACTCC 59.126 38.462 0.00 0.00 38.51 3.85
1625 1944 7.666623 TGAGACACTACTATCAAATGTGTTGA 58.333 34.615 0.00 0.00 41.21 3.18
1659 1978 8.770828 GCGTTTAACCATGTAATGTACTATCAT 58.229 33.333 0.00 0.00 44.81 2.45
1660 1979 7.043258 CGCGTTTAACCATGTAATGTACTATCA 60.043 37.037 0.00 0.00 44.81 2.15
1661 1980 7.167968 TCGCGTTTAACCATGTAATGTACTATC 59.832 37.037 5.77 0.00 44.81 2.08
1662 1981 6.979817 TCGCGTTTAACCATGTAATGTACTAT 59.020 34.615 5.77 0.00 44.81 2.12
1663 1982 6.253298 GTCGCGTTTAACCATGTAATGTACTA 59.747 38.462 5.77 0.00 44.81 1.82
1664 1983 5.062558 GTCGCGTTTAACCATGTAATGTACT 59.937 40.000 5.77 0.00 44.81 2.73
1665 1984 5.250332 GTCGCGTTTAACCATGTAATGTAC 58.750 41.667 5.77 0.00 44.81 2.90
1666 1985 4.031539 CGTCGCGTTTAACCATGTAATGTA 59.968 41.667 5.77 0.00 44.81 2.29
1667 1986 3.181528 CGTCGCGTTTAACCATGTAATGT 60.182 43.478 5.77 0.00 44.81 2.71
1668 1987 3.181528 ACGTCGCGTTTAACCATGTAATG 60.182 43.478 5.77 0.00 40.05 1.90
1669 1988 2.995258 ACGTCGCGTTTAACCATGTAAT 59.005 40.909 5.77 0.00 36.35 1.89
1670 1989 2.155347 CACGTCGCGTTTAACCATGTAA 59.845 45.455 5.77 0.00 38.32 2.41
1671 1990 1.720316 CACGTCGCGTTTAACCATGTA 59.280 47.619 5.77 0.00 38.32 2.29
1672 1991 0.509499 CACGTCGCGTTTAACCATGT 59.491 50.000 5.77 0.00 38.32 3.21
1673 1992 0.179235 CCACGTCGCGTTTAACCATG 60.179 55.000 5.77 0.00 38.32 3.66
1674 1993 0.319727 TCCACGTCGCGTTTAACCAT 60.320 50.000 5.77 0.00 38.32 3.55
1675 1994 1.067084 TCCACGTCGCGTTTAACCA 59.933 52.632 5.77 0.00 38.32 3.67
1676 1995 1.488525 GTCCACGTCGCGTTTAACC 59.511 57.895 5.77 0.00 38.32 2.85
1677 1996 1.126438 CGTCCACGTCGCGTTTAAC 59.874 57.895 5.77 0.00 38.32 2.01
1678 1997 0.387112 ATCGTCCACGTCGCGTTTAA 60.387 50.000 5.77 0.00 38.32 1.52
1679 1998 0.445829 TATCGTCCACGTCGCGTTTA 59.554 50.000 5.77 0.00 38.32 2.01
1680 1999 0.795735 CTATCGTCCACGTCGCGTTT 60.796 55.000 5.77 0.00 38.32 3.60
1681 2000 1.226211 CTATCGTCCACGTCGCGTT 60.226 57.895 5.77 0.00 38.32 4.84
1682 2001 2.102438 TCTATCGTCCACGTCGCGT 61.102 57.895 5.77 0.00 42.36 6.01
1683 2002 1.650536 GTCTATCGTCCACGTCGCG 60.651 63.158 0.00 0.00 40.80 5.87
1684 2003 1.298190 GGTCTATCGTCCACGTCGC 60.298 63.158 0.00 0.00 40.80 5.19
1685 2004 0.661552 ATGGTCTATCGTCCACGTCG 59.338 55.000 0.00 0.00 40.80 5.12
1686 2005 1.001597 GGATGGTCTATCGTCCACGTC 60.002 57.143 0.00 0.00 41.33 4.34
1687 2006 1.030457 GGATGGTCTATCGTCCACGT 58.970 55.000 0.00 0.00 41.33 4.49
1688 2007 1.267261 GAGGATGGTCTATCGTCCACG 59.733 57.143 7.47 0.00 43.49 4.94
1689 2008 2.588620 AGAGGATGGTCTATCGTCCAC 58.411 52.381 13.44 0.00 46.78 4.02
1690 2009 4.659529 ATAGAGGATGGTCTATCGTCCA 57.340 45.455 13.44 2.99 46.78 4.02
1691 2010 5.944599 TGTTATAGAGGATGGTCTATCGTCC 59.055 44.000 13.44 0.00 46.78 4.79
1692 2011 6.655848 AGTGTTATAGAGGATGGTCTATCGTC 59.344 42.308 10.07 10.07 46.23 4.20
1693 2012 6.544650 AGTGTTATAGAGGATGGTCTATCGT 58.455 40.000 0.00 0.00 39.86 3.73
1694 2013 8.563123 TTAGTGTTATAGAGGATGGTCTATCG 57.437 38.462 0.00 0.00 39.86 2.92
1695 2014 8.463607 GCTTAGTGTTATAGAGGATGGTCTATC 58.536 40.741 0.00 0.00 39.86 2.08
1696 2015 8.174085 AGCTTAGTGTTATAGAGGATGGTCTAT 58.826 37.037 0.00 0.00 41.67 1.98
1697 2016 7.527796 AGCTTAGTGTTATAGAGGATGGTCTA 58.472 38.462 0.00 0.00 33.52 2.59
1698 2017 6.377912 AGCTTAGTGTTATAGAGGATGGTCT 58.622 40.000 0.00 0.00 0.00 3.85
1699 2018 6.294843 GGAGCTTAGTGTTATAGAGGATGGTC 60.295 46.154 0.00 0.00 0.00 4.02
1700 2019 5.540719 GGAGCTTAGTGTTATAGAGGATGGT 59.459 44.000 0.00 0.00 0.00 3.55
1701 2020 5.046950 GGGAGCTTAGTGTTATAGAGGATGG 60.047 48.000 0.00 0.00 0.00 3.51
1736 2055 3.159213 ACCTCAATTGATTGTGAGCCA 57.841 42.857 8.96 0.00 40.01 4.75
1866 2278 5.696270 GCTTCAAAAGTAGGGAATTTTGTGG 59.304 40.000 9.56 6.10 43.58 4.17
1870 2282 7.603180 AAGAGCTTCAAAAGTAGGGAATTTT 57.397 32.000 0.00 0.00 0.00 1.82
1872 2284 8.706322 TTAAAGAGCTTCAAAAGTAGGGAATT 57.294 30.769 0.00 0.00 0.00 2.17
1878 2290 9.950680 TGTTGAATTAAAGAGCTTCAAAAGTAG 57.049 29.630 3.40 0.00 39.74 2.57
1881 2293 9.178427 CTCTGTTGAATTAAAGAGCTTCAAAAG 57.822 33.333 10.53 10.53 42.05 2.27
1903 2315 8.970859 AATCAAATCCTACTTGAATACCTCTG 57.029 34.615 0.00 0.00 36.43 3.35
1916 2328 9.072294 CGACCAAAATTGTAAATCAAATCCTAC 57.928 33.333 0.00 0.00 39.62 3.18
1918 2330 7.096551 CCGACCAAAATTGTAAATCAAATCCT 58.903 34.615 0.00 0.00 39.62 3.24
1988 2402 2.430080 GAAGCGCGCGATTGGTATGG 62.430 60.000 39.44 1.95 0.00 2.74
1993 2407 3.929948 GAGGAAGCGCGCGATTGG 61.930 66.667 39.44 6.42 0.00 3.16
2040 2465 0.108329 GGTGCTACAGTACCGCATGT 60.108 55.000 0.48 0.00 40.82 3.21
2047 2472 7.518370 GCATGTGTTATATTGGTGCTACAGTAC 60.518 40.741 0.00 0.00 0.00 2.73
2067 2492 1.091197 TGCATCGGTAGCTGCATGTG 61.091 55.000 3.61 0.00 43.57 3.21
2107 2532 6.392354 TCTATGTTATCCGCTAATAAACCCG 58.608 40.000 0.00 0.00 0.00 5.28
2128 2553 4.141135 TGGGTCTTTTTGGGTGTGATTCTA 60.141 41.667 0.00 0.00 0.00 2.10
2285 2711 4.016444 TGGATGTCAGTAATTTTGGCTCC 58.984 43.478 0.00 0.00 0.00 4.70



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.