Multiple sequence alignment - TraesCS3B01G546800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G546800 chr3B 100.000 2312 0 0 1 2312 783141700 783144011 0.000000e+00 4270
1 TraesCS3B01G546800 chr3B 90.144 416 29 7 1906 2312 809340163 809340575 4.370000e-147 531
2 TraesCS3B01G546800 chr3B 81.071 280 36 10 884 1160 783012957 783013222 8.370000e-50 207
3 TraesCS3B01G546800 chr3B 98.750 80 0 1 262 340 783141886 783141965 8.610000e-30 141
4 TraesCS3B01G546800 chr3B 98.750 80 0 1 187 266 783141961 783142039 8.610000e-30 141
5 TraesCS3B01G546800 chr3D 95.012 1223 50 8 262 1479 586578648 586577432 0.000000e+00 1910
6 TraesCS3B01G546800 chr3D 90.191 418 25 7 1906 2312 530415033 530414621 4.370000e-147 531
7 TraesCS3B01G546800 chr3D 96.183 262 10 0 1 262 586578834 586578573 1.640000e-116 429
8 TraesCS3B01G546800 chr3D 91.571 261 18 3 1650 1906 586577437 586577177 7.860000e-95 357
9 TraesCS3B01G546800 chr3D 90.196 153 13 1 1331 1481 586577004 586576852 5.040000e-47 198
10 TraesCS3B01G546800 chrUn 95.086 407 18 2 1906 2312 35282066 35281662 6.970000e-180 640
11 TraesCS3B01G546800 chrUn 89.286 168 14 3 1482 1648 16723675 16723511 8.370000e-50 207
12 TraesCS3B01G546800 chrUn 88.690 168 15 3 1482 1648 16705926 16705762 3.900000e-48 202
13 TraesCS3B01G546800 chr6B 95.408 392 14 2 1921 2312 6617989 6618376 2.520000e-174 621
14 TraesCS3B01G546800 chr7B 94.500 400 19 3 1906 2305 171105600 171105996 4.220000e-172 614
15 TraesCS3B01G546800 chr2A 92.494 413 18 7 1906 2312 587906608 587907013 1.540000e-161 579
16 TraesCS3B01G546800 chr2A 91.727 411 22 8 1908 2312 13405148 13404744 5.580000e-156 560
17 TraesCS3B01G546800 chr7A 90.097 414 29 7 1906 2312 629470222 629470630 5.660000e-146 527
18 TraesCS3B01G546800 chr5A 88.305 419 35 10 1904 2312 336644103 336643689 7.420000e-135 490
19 TraesCS3B01G546800 chr5A 89.286 168 17 1 1482 1648 144748784 144748951 2.330000e-50 209
20 TraesCS3B01G546800 chr5A 90.625 160 12 3 1490 1648 286058672 286058515 2.330000e-50 209
21 TraesCS3B01G546800 chr1D 90.751 173 15 1 1481 1652 481182114 481182286 1.790000e-56 230
22 TraesCS3B01G546800 chr1D 90.476 168 15 1 1482 1648 481319775 481319942 1.080000e-53 220
23 TraesCS3B01G546800 chr6A 90.476 168 15 1 1482 1648 39132924 39133091 1.080000e-53 220
24 TraesCS3B01G546800 chr4B 91.195 159 14 0 1490 1648 350379135 350379293 1.390000e-52 217
25 TraesCS3B01G546800 chr1A 86.458 192 21 3 1474 1662 544455938 544455749 3.010000e-49 206


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G546800 chr3B 783141700 783144011 2311 False 1517.333333 4270 99.166667 1 2312 3 chr3B.!!$F3 2311
1 TraesCS3B01G546800 chr3D 586576852 586578834 1982 True 723.500000 1910 93.240500 1 1906 4 chr3D.!!$R2 1905

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
30 31 0.110823 GCGTTACAAACACGAGCCAG 60.111 55.0 0.0 0.0 40.2 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1472 1478 0.036294 GTACACCCCTGGACAAGAGC 60.036 60.0 0.0 0.0 30.44 4.09 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 1.598882 TGATGCCTGCGTTACAAACA 58.401 45.000 0.00 0.00 0.00 2.83
23 24 1.265635 TGATGCCTGCGTTACAAACAC 59.734 47.619 0.00 0.00 0.00 3.32
30 31 0.110823 GCGTTACAAACACGAGCCAG 60.111 55.000 0.00 0.00 40.20 4.85
120 121 2.484742 AGAGCATGATGACACTGCAA 57.515 45.000 0.00 0.00 35.04 4.08
135 136 0.681887 TGCAATGGGAGGATGCTGTG 60.682 55.000 0.00 0.00 40.66 3.66
210 211 2.595009 GATCTTCGGTGGGGCCACTC 62.595 65.000 6.53 1.02 45.52 3.51
241 242 3.074412 ACCACGAATAGCTCCTTTTGTG 58.926 45.455 13.60 13.60 37.10 3.33
242 243 3.074412 CCACGAATAGCTCCTTTTGTGT 58.926 45.455 16.90 0.00 36.09 3.72
243 244 3.502211 CCACGAATAGCTCCTTTTGTGTT 59.498 43.478 16.90 0.00 36.09 3.32
244 245 4.466828 CACGAATAGCTCCTTTTGTGTTG 58.533 43.478 12.81 0.00 34.10 3.33
245 246 3.058224 ACGAATAGCTCCTTTTGTGTTGC 60.058 43.478 0.00 0.00 0.00 4.17
246 247 3.189287 CGAATAGCTCCTTTTGTGTTGCT 59.811 43.478 0.00 0.00 34.92 3.91
247 248 4.320494 CGAATAGCTCCTTTTGTGTTGCTT 60.320 41.667 0.00 0.00 32.72 3.91
248 249 5.106712 CGAATAGCTCCTTTTGTGTTGCTTA 60.107 40.000 0.00 0.00 32.72 3.09
249 250 5.886960 ATAGCTCCTTTTGTGTTGCTTAG 57.113 39.130 0.00 0.00 32.72 2.18
250 251 3.555966 AGCTCCTTTTGTGTTGCTTAGT 58.444 40.909 0.00 0.00 0.00 2.24
251 252 3.565902 AGCTCCTTTTGTGTTGCTTAGTC 59.434 43.478 0.00 0.00 0.00 2.59
252 253 3.607078 GCTCCTTTTGTGTTGCTTAGTCG 60.607 47.826 0.00 0.00 0.00 4.18
253 254 2.875933 TCCTTTTGTGTTGCTTAGTCGG 59.124 45.455 0.00 0.00 0.00 4.79
254 255 2.616842 CCTTTTGTGTTGCTTAGTCGGT 59.383 45.455 0.00 0.00 0.00 4.69
255 256 3.066203 CCTTTTGTGTTGCTTAGTCGGTT 59.934 43.478 0.00 0.00 0.00 4.44
256 257 3.955771 TTTGTGTTGCTTAGTCGGTTC 57.044 42.857 0.00 0.00 0.00 3.62
257 258 2.902705 TGTGTTGCTTAGTCGGTTCT 57.097 45.000 0.00 0.00 0.00 3.01
258 259 3.188159 TGTGTTGCTTAGTCGGTTCTT 57.812 42.857 0.00 0.00 0.00 2.52
259 260 3.128349 TGTGTTGCTTAGTCGGTTCTTC 58.872 45.455 0.00 0.00 0.00 2.87
260 261 2.155155 GTGTTGCTTAGTCGGTTCTTCG 59.845 50.000 0.00 0.00 0.00 3.79
261 262 1.725164 GTTGCTTAGTCGGTTCTTCGG 59.275 52.381 0.00 0.00 0.00 4.30
262 263 1.250328 TGCTTAGTCGGTTCTTCGGA 58.750 50.000 0.00 0.00 0.00 4.55
263 264 1.068055 TGCTTAGTCGGTTCTTCGGAC 60.068 52.381 0.00 0.00 43.65 4.79
264 265 1.735038 GCTTAGTCGGTTCTTCGGACC 60.735 57.143 0.00 0.00 44.14 4.46
265 266 0.523072 TTAGTCGGTTCTTCGGACCG 59.477 55.000 7.84 7.84 44.14 4.79
266 267 1.308069 TAGTCGGTTCTTCGGACCGG 61.308 60.000 15.25 0.00 46.03 5.28
267 268 2.282391 TCGGTTCTTCGGACCGGA 60.282 61.111 15.25 3.72 46.03 5.14
268 269 1.679977 TCGGTTCTTCGGACCGGAT 60.680 57.895 15.25 0.00 46.03 4.18
269 270 1.226888 CGGTTCTTCGGACCGGATC 60.227 63.158 15.25 1.18 42.70 3.36
270 271 1.664321 CGGTTCTTCGGACCGGATCT 61.664 60.000 15.25 0.00 42.70 2.75
271 272 0.535797 GGTTCTTCGGACCGGATCTT 59.464 55.000 15.25 0.00 0.00 2.40
272 273 1.471153 GGTTCTTCGGACCGGATCTTC 60.471 57.143 15.25 0.00 0.00 2.87
273 274 0.454600 TTCTTCGGACCGGATCTTCG 59.545 55.000 15.25 0.00 0.00 3.79
280 281 4.547367 CCGGATCTTCGGTGGGGC 62.547 72.222 0.00 0.00 44.60 5.80
281 282 4.547367 CGGATCTTCGGTGGGGCC 62.547 72.222 0.00 0.00 0.00 5.80
282 283 3.407967 GGATCTTCGGTGGGGCCA 61.408 66.667 4.39 0.00 36.97 5.36
283 284 2.124695 GATCTTCGGTGGGGCCAC 60.125 66.667 4.39 0.00 45.49 5.01
284 285 2.610859 ATCTTCGGTGGGGCCACT 60.611 61.111 6.53 0.00 45.52 4.00
285 286 2.595009 GATCTTCGGTGGGGCCACTC 62.595 65.000 6.53 1.02 45.52 3.51
286 287 4.760047 CTTCGGTGGGGCCACTCG 62.760 72.222 6.53 11.07 45.52 4.18
290 291 4.740822 GGTGGGGCCACTCGCATT 62.741 66.667 6.53 0.00 45.52 3.56
291 292 3.443045 GTGGGGCCACTCGCATTG 61.443 66.667 6.53 0.00 43.12 2.82
292 293 3.965258 TGGGGCCACTCGCATTGT 61.965 61.111 6.53 0.00 40.31 2.71
293 294 3.134127 GGGGCCACTCGCATTGTC 61.134 66.667 4.39 0.00 40.31 3.18
294 295 2.045926 GGGCCACTCGCATTGTCT 60.046 61.111 4.39 0.00 40.31 3.41
295 296 1.220749 GGGCCACTCGCATTGTCTA 59.779 57.895 4.39 0.00 40.31 2.59
296 297 1.090052 GGGCCACTCGCATTGTCTAC 61.090 60.000 4.39 0.00 40.31 2.59
297 298 1.090052 GGCCACTCGCATTGTCTACC 61.090 60.000 0.00 0.00 40.31 3.18
298 299 0.391130 GCCACTCGCATTGTCTACCA 60.391 55.000 0.00 0.00 37.47 3.25
299 300 1.359848 CCACTCGCATTGTCTACCAC 58.640 55.000 0.00 0.00 0.00 4.16
300 301 0.992072 CACTCGCATTGTCTACCACG 59.008 55.000 0.00 0.00 0.00 4.94
301 302 0.885879 ACTCGCATTGTCTACCACGA 59.114 50.000 0.00 0.00 0.00 4.35
302 303 1.271379 ACTCGCATTGTCTACCACGAA 59.729 47.619 0.00 0.00 0.00 3.85
303 304 2.094182 ACTCGCATTGTCTACCACGAAT 60.094 45.455 0.00 0.00 0.00 3.34
304 305 3.129813 ACTCGCATTGTCTACCACGAATA 59.870 43.478 0.00 0.00 0.00 1.75
305 306 3.702330 TCGCATTGTCTACCACGAATAG 58.298 45.455 0.00 0.00 0.00 1.73
306 307 2.218759 CGCATTGTCTACCACGAATAGC 59.781 50.000 0.00 0.00 0.00 2.97
307 308 3.458189 GCATTGTCTACCACGAATAGCT 58.542 45.455 0.00 0.00 0.00 3.32
308 309 3.491267 GCATTGTCTACCACGAATAGCTC 59.509 47.826 0.00 0.00 0.00 4.09
309 310 3.795623 TTGTCTACCACGAATAGCTCC 57.204 47.619 0.00 0.00 0.00 4.70
310 311 3.014304 TGTCTACCACGAATAGCTCCT 57.986 47.619 0.00 0.00 0.00 3.69
311 312 3.362706 TGTCTACCACGAATAGCTCCTT 58.637 45.455 0.00 0.00 0.00 3.36
312 313 3.767673 TGTCTACCACGAATAGCTCCTTT 59.232 43.478 0.00 0.00 0.00 3.11
313 314 4.222145 TGTCTACCACGAATAGCTCCTTTT 59.778 41.667 0.00 0.00 0.00 2.27
314 315 4.567159 GTCTACCACGAATAGCTCCTTTTG 59.433 45.833 0.00 0.00 0.00 2.44
315 316 3.418684 ACCACGAATAGCTCCTTTTGT 57.581 42.857 0.00 0.00 0.00 2.83
337 338 0.389426 TGCTTAGTCGGTTCTTCGGC 60.389 55.000 0.00 0.00 34.63 5.54
400 401 9.685828 TGTTTGATTATGCATTGATATCACATG 57.314 29.630 3.54 12.85 0.00 3.21
403 404 5.648178 TTATGCATTGATATCACATGGCC 57.352 39.130 20.11 0.00 0.00 5.36
422 423 4.649674 TGGCCTAATTTTGTGTTACAACCA 59.350 37.500 3.32 0.00 37.90 3.67
544 545 8.737168 TGTGACTGGATAAAAATCAGGATTAG 57.263 34.615 0.00 0.00 33.19 1.73
563 564 9.343539 AGGATTAGAATGTTACAAAGGATTAGC 57.656 33.333 0.00 0.00 0.00 3.09
564 565 9.343539 GGATTAGAATGTTACAAAGGATTAGCT 57.656 33.333 0.00 0.00 0.00 3.32
830 834 0.834612 ACAAGACACCTCCAAACCGA 59.165 50.000 0.00 0.00 0.00 4.69
832 836 2.294074 CAAGACACCTCCAAACCGAAA 58.706 47.619 0.00 0.00 0.00 3.46
852 856 5.562113 CGAAACCTTCCATGAAAGTAACCAC 60.562 44.000 0.00 0.00 0.00 4.16
925 929 4.647611 TGACACCAAATTAACCTCGATGT 58.352 39.130 0.00 0.00 0.00 3.06
926 930 5.795972 TGACACCAAATTAACCTCGATGTA 58.204 37.500 0.00 0.00 0.00 2.29
927 931 6.411376 TGACACCAAATTAACCTCGATGTAT 58.589 36.000 0.00 0.00 0.00 2.29
951 955 8.932945 ATGTATATATAAATCGGTGCACTCTG 57.067 34.615 17.98 7.36 0.00 3.35
952 956 6.811665 TGTATATATAAATCGGTGCACTCTGC 59.188 38.462 17.98 0.00 45.29 4.26
965 969 1.062488 ACTCTGCCCCCACAGTTTCT 61.062 55.000 0.00 0.00 38.84 2.52
966 970 0.111253 CTCTGCCCCCACAGTTTCTT 59.889 55.000 0.00 0.00 38.84 2.52
986 990 5.345702 TCTTATCACAAACGGGTCGAATAG 58.654 41.667 0.00 0.00 0.00 1.73
991 995 2.159142 ACAAACGGGTCGAATAGCTAGG 60.159 50.000 0.00 0.00 0.00 3.02
994 998 2.502295 ACGGGTCGAATAGCTAGGTAG 58.498 52.381 7.83 0.00 0.00 3.18
1048 1052 0.380733 TGTCATCTTCGCGCTCGTAT 59.619 50.000 5.56 0.00 36.96 3.06
1121 1125 0.447801 GTGATGCCAATGTCACCGTC 59.552 55.000 0.00 0.00 38.98 4.79
1125 1129 0.888736 TGCCAATGTCACCGTCCTTG 60.889 55.000 0.00 0.00 0.00 3.61
1178 1182 3.936203 GGACCTGGACGTGCACCA 61.936 66.667 12.15 2.34 35.96 4.17
1299 1303 0.735978 GCCAAGCCATTTACGGTTGC 60.736 55.000 0.00 0.00 0.00 4.17
1301 1305 0.239879 CAAGCCATTTACGGTTGCGT 59.760 50.000 0.00 0.00 0.00 5.24
1316 1320 4.448210 GGTTGCGTCCCTAAATAATCTGA 58.552 43.478 0.00 0.00 0.00 3.27
1323 1327 8.154203 TGCGTCCCTAAATAATCTGAATGAATA 58.846 33.333 0.00 0.00 0.00 1.75
1345 1349 1.447838 CTGCACTACCGGCGTCAAT 60.448 57.895 6.01 0.00 0.00 2.57
1384 1388 0.111446 TTCGGTTGCCAGGGAATTGA 59.889 50.000 0.00 0.00 0.00 2.57
1407 1411 6.501805 TGAAAGGGATGTAGTGATATATGCCT 59.498 38.462 0.00 0.26 40.15 4.75
1409 1413 6.305272 AGGGATGTAGTGATATATGCCTTG 57.695 41.667 0.00 0.00 36.32 3.61
1410 1414 6.025539 AGGGATGTAGTGATATATGCCTTGA 58.974 40.000 0.00 0.00 36.32 3.02
1453 1459 7.094205 GGTGGTGATTTTTCTACTGATCAATGT 60.094 37.037 0.00 0.00 31.01 2.71
1459 1465 7.509141 TTTTTCTACTGATCAATGTGCTTCA 57.491 32.000 0.00 0.00 0.00 3.02
1466 1472 0.896923 TCAATGTGCTTCAATGGCCC 59.103 50.000 0.00 0.00 0.00 5.80
1472 1478 1.067354 GTGCTTCAATGGCCCAAGAAG 60.067 52.381 19.47 19.47 40.23 2.85
1485 1491 1.818642 CAAGAAGCTCTTGTCCAGGG 58.181 55.000 14.26 0.00 46.50 4.45
1486 1492 0.695347 AAGAAGCTCTTGTCCAGGGG 59.305 55.000 0.00 0.00 34.98 4.79
1487 1493 0.474660 AGAAGCTCTTGTCCAGGGGT 60.475 55.000 0.00 0.00 33.92 4.95
1488 1494 0.322008 GAAGCTCTTGTCCAGGGGTG 60.322 60.000 0.00 0.00 32.30 4.61
1489 1495 1.062488 AAGCTCTTGTCCAGGGGTGT 61.062 55.000 0.00 0.00 32.30 4.16
1490 1496 0.178903 AGCTCTTGTCCAGGGGTGTA 60.179 55.000 0.00 0.00 29.95 2.90
1491 1497 0.036294 GCTCTTGTCCAGGGGTGTAC 60.036 60.000 0.00 0.00 0.00 2.90
1492 1498 0.613777 CTCTTGTCCAGGGGTGTACC 59.386 60.000 0.00 0.00 39.11 3.34
1505 1511 2.696506 GGTGTACCCAAGTTGAGCTAC 58.303 52.381 3.87 1.50 0.00 3.58
1506 1512 2.614734 GGTGTACCCAAGTTGAGCTACC 60.615 54.545 3.87 2.80 0.00 3.18
1507 1513 1.626825 TGTACCCAAGTTGAGCTACCC 59.373 52.381 3.87 0.00 0.00 3.69
1508 1514 0.899720 TACCCAAGTTGAGCTACCCG 59.100 55.000 3.87 0.00 0.00 5.28
1509 1515 1.078426 CCCAAGTTGAGCTACCCGG 60.078 63.158 3.87 0.00 0.00 5.73
1510 1516 1.078426 CCAAGTTGAGCTACCCGGG 60.078 63.158 22.25 22.25 0.00 5.73
1511 1517 1.677552 CAAGTTGAGCTACCCGGGT 59.322 57.895 32.66 32.66 0.00 5.28
1512 1518 0.673644 CAAGTTGAGCTACCCGGGTG 60.674 60.000 36.97 25.25 0.00 4.61
1513 1519 2.436115 GTTGAGCTACCCGGGTGC 60.436 66.667 36.97 32.64 0.00 5.01
1514 1520 2.925706 TTGAGCTACCCGGGTGCA 60.926 61.111 36.97 23.87 0.00 4.57
1515 1521 3.248446 TTGAGCTACCCGGGTGCAC 62.248 63.158 36.97 30.52 0.00 4.57
1516 1522 3.702048 GAGCTACCCGGGTGCACA 61.702 66.667 36.97 15.71 0.00 4.57
1517 1523 3.665675 GAGCTACCCGGGTGCACAG 62.666 68.421 36.97 25.64 0.00 3.66
1518 1524 3.702048 GCTACCCGGGTGCACAGA 61.702 66.667 36.97 14.43 0.00 3.41
1519 1525 3.065306 CTACCCGGGTGCACAGAA 58.935 61.111 36.97 13.59 0.00 3.02
1520 1526 1.375523 CTACCCGGGTGCACAGAAC 60.376 63.158 36.97 4.59 0.00 3.01
1521 1527 2.107041 CTACCCGGGTGCACAGAACA 62.107 60.000 36.97 11.92 0.00 3.18
1522 1528 2.386064 TACCCGGGTGCACAGAACAC 62.386 60.000 36.97 0.00 37.31 3.32
1527 1533 2.203153 GTGCACAGAACACCGGGT 60.203 61.111 13.17 0.00 31.67 5.28
1528 1534 2.203139 TGCACAGAACACCGGGTG 60.203 61.111 25.21 25.21 39.75 4.61
1530 1536 2.203139 CACAGAACACCGGGTGCA 60.203 61.111 26.62 0.00 36.98 4.57
1531 1537 1.821759 CACAGAACACCGGGTGCAA 60.822 57.895 26.62 0.00 36.98 4.08
1532 1538 1.077357 ACAGAACACCGGGTGCAAA 60.077 52.632 26.62 0.00 36.98 3.68
1533 1539 0.681564 ACAGAACACCGGGTGCAAAA 60.682 50.000 26.62 0.00 36.98 2.44
1534 1540 0.673437 CAGAACACCGGGTGCAAAAT 59.327 50.000 26.62 8.28 36.98 1.82
1535 1541 0.673437 AGAACACCGGGTGCAAAATG 59.327 50.000 26.62 1.80 36.98 2.32
1536 1542 0.943835 GAACACCGGGTGCAAAATGC 60.944 55.000 26.62 1.75 45.29 3.56
1537 1543 1.398958 AACACCGGGTGCAAAATGCT 61.399 50.000 26.62 1.70 45.31 3.79
1538 1544 1.367102 CACCGGGTGCAAAATGCTT 59.633 52.632 15.29 0.00 45.31 3.91
1539 1545 0.249826 CACCGGGTGCAAAATGCTTT 60.250 50.000 15.29 0.00 45.31 3.51
1540 1546 0.033366 ACCGGGTGCAAAATGCTTTC 59.967 50.000 6.32 0.00 45.31 2.62
1541 1547 0.318120 CCGGGTGCAAAATGCTTTCT 59.682 50.000 3.78 0.00 45.31 2.52
1542 1548 1.270252 CCGGGTGCAAAATGCTTTCTT 60.270 47.619 3.78 0.00 45.31 2.52
1543 1549 2.482864 CGGGTGCAAAATGCTTTCTTT 58.517 42.857 3.78 0.00 45.31 2.52
1544 1550 2.221517 CGGGTGCAAAATGCTTTCTTTG 59.778 45.455 3.78 0.00 45.31 2.77
1545 1551 3.205338 GGGTGCAAAATGCTTTCTTTGT 58.795 40.909 3.78 0.00 45.31 2.83
1546 1552 4.376146 GGGTGCAAAATGCTTTCTTTGTA 58.624 39.130 3.78 0.00 45.31 2.41
1547 1553 4.813697 GGGTGCAAAATGCTTTCTTTGTAA 59.186 37.500 3.78 0.00 45.31 2.41
1548 1554 5.050159 GGGTGCAAAATGCTTTCTTTGTAAG 60.050 40.000 3.78 0.00 45.31 2.34
1549 1555 5.523552 GGTGCAAAATGCTTTCTTTGTAAGT 59.476 36.000 3.78 0.00 45.31 2.24
1550 1556 6.037062 GGTGCAAAATGCTTTCTTTGTAAGTT 59.963 34.615 3.78 0.00 45.31 2.66
1551 1557 7.413988 GGTGCAAAATGCTTTCTTTGTAAGTTT 60.414 33.333 3.78 0.00 45.31 2.66
1552 1558 7.635973 GTGCAAAATGCTTTCTTTGTAAGTTTC 59.364 33.333 3.78 0.00 45.31 2.78
1553 1559 7.332926 TGCAAAATGCTTTCTTTGTAAGTTTCA 59.667 29.630 3.78 0.00 45.31 2.69
1554 1560 8.337532 GCAAAATGCTTTCTTTGTAAGTTTCAT 58.662 29.630 0.00 0.00 40.96 2.57
1555 1561 9.640974 CAAAATGCTTTCTTTGTAAGTTTCATG 57.359 29.630 0.00 0.00 0.00 3.07
1556 1562 7.412137 AATGCTTTCTTTGTAAGTTTCATGC 57.588 32.000 0.00 0.00 0.00 4.06
1557 1563 5.900425 TGCTTTCTTTGTAAGTTTCATGCA 58.100 33.333 0.00 0.00 0.00 3.96
1558 1564 6.336566 TGCTTTCTTTGTAAGTTTCATGCAA 58.663 32.000 0.00 0.00 0.00 4.08
1559 1565 6.815641 TGCTTTCTTTGTAAGTTTCATGCAAA 59.184 30.769 0.00 0.00 32.63 3.68
1560 1566 7.332926 TGCTTTCTTTGTAAGTTTCATGCAAAA 59.667 29.630 0.00 0.00 33.10 2.44
1561 1567 8.337532 GCTTTCTTTGTAAGTTTCATGCAAAAT 58.662 29.630 0.00 0.00 33.10 1.82
1572 1578 8.565896 AGTTTCATGCAAAATATAGAGTGTGA 57.434 30.769 0.00 0.00 0.00 3.58
1573 1579 8.454106 AGTTTCATGCAAAATATAGAGTGTGAC 58.546 33.333 0.00 0.00 0.00 3.67
1574 1580 7.920160 TTCATGCAAAATATAGAGTGTGACA 57.080 32.000 0.00 0.00 0.00 3.58
1575 1581 7.307493 TCATGCAAAATATAGAGTGTGACAC 57.693 36.000 7.83 7.83 34.10 3.67
1576 1582 6.316140 TCATGCAAAATATAGAGTGTGACACC 59.684 38.462 12.81 4.09 34.49 4.16
1577 1583 4.941263 TGCAAAATATAGAGTGTGACACCC 59.059 41.667 12.81 0.00 34.49 4.61
1578 1584 4.335594 GCAAAATATAGAGTGTGACACCCC 59.664 45.833 12.81 4.84 34.49 4.95
1579 1585 5.496556 CAAAATATAGAGTGTGACACCCCA 58.503 41.667 12.81 0.00 34.49 4.96
1580 1586 5.975988 AAATATAGAGTGTGACACCCCAT 57.024 39.130 12.81 5.52 34.49 4.00
1581 1587 5.552870 AATATAGAGTGTGACACCCCATC 57.447 43.478 12.81 3.24 34.49 3.51
1582 1588 2.623418 TAGAGTGTGACACCCCATCT 57.377 50.000 12.81 10.95 34.49 2.90
1583 1589 1.734655 AGAGTGTGACACCCCATCTT 58.265 50.000 12.81 0.00 34.49 2.40
1584 1590 2.057922 AGAGTGTGACACCCCATCTTT 58.942 47.619 12.81 0.00 34.49 2.52
1585 1591 3.248024 AGAGTGTGACACCCCATCTTTA 58.752 45.455 12.81 0.00 34.49 1.85
1586 1592 3.261897 AGAGTGTGACACCCCATCTTTAG 59.738 47.826 12.81 0.00 34.49 1.85
1587 1593 3.248024 AGTGTGACACCCCATCTTTAGA 58.752 45.455 12.81 0.00 34.49 2.10
1588 1594 3.846588 AGTGTGACACCCCATCTTTAGAT 59.153 43.478 12.81 0.00 34.49 1.98
1589 1595 4.323792 AGTGTGACACCCCATCTTTAGATG 60.324 45.833 12.81 11.89 42.08 2.90
1590 1596 6.519952 AGTGTGACACCCCATCTTTAGATGA 61.520 44.000 18.87 0.00 43.50 2.92
1591 1597 7.941029 AGTGTGACACCCCATCTTTAGATGAA 61.941 42.308 18.87 0.00 43.50 2.57
1592 1598 9.330578 AGTGTGACACCCCATCTTTAGATGAAA 62.331 40.741 18.87 0.00 43.50 2.69
1618 1624 6.957984 ATGAATGATCATATGCTACGACAC 57.042 37.500 9.04 0.00 44.50 3.67
1619 1625 5.230182 TGAATGATCATATGCTACGACACC 58.770 41.667 9.04 0.00 0.00 4.16
1620 1626 3.282831 TGATCATATGCTACGACACCG 57.717 47.619 0.00 0.00 42.50 4.94
1621 1627 2.030274 TGATCATATGCTACGACACCGG 60.030 50.000 0.00 0.00 40.78 5.28
1622 1628 0.671796 TCATATGCTACGACACCGGG 59.328 55.000 6.32 0.00 40.78 5.73
1623 1629 0.387929 CATATGCTACGACACCGGGT 59.612 55.000 6.32 0.00 40.78 5.28
1624 1630 0.672342 ATATGCTACGACACCGGGTC 59.328 55.000 6.32 9.78 43.36 4.46
1633 1639 2.474410 GACACCGGGTCATTTTCTCT 57.526 50.000 6.32 0.00 46.19 3.10
1634 1640 2.347731 GACACCGGGTCATTTTCTCTC 58.652 52.381 6.32 0.00 46.19 3.20
1635 1641 1.978580 ACACCGGGTCATTTTCTCTCT 59.021 47.619 6.32 0.00 0.00 3.10
1636 1642 3.170717 ACACCGGGTCATTTTCTCTCTA 58.829 45.455 6.32 0.00 0.00 2.43
1637 1643 3.195825 ACACCGGGTCATTTTCTCTCTAG 59.804 47.826 6.32 0.00 0.00 2.43
1638 1644 3.447586 CACCGGGTCATTTTCTCTCTAGA 59.552 47.826 6.32 0.00 0.00 2.43
1639 1645 4.100189 CACCGGGTCATTTTCTCTCTAGAT 59.900 45.833 6.32 0.00 0.00 1.98
1640 1646 4.342665 ACCGGGTCATTTTCTCTCTAGATC 59.657 45.833 6.32 0.00 0.00 2.75
1641 1647 4.262249 CCGGGTCATTTTCTCTCTAGATCC 60.262 50.000 0.00 0.00 0.00 3.36
1642 1648 4.342378 CGGGTCATTTTCTCTCTAGATCCA 59.658 45.833 0.00 0.00 0.00 3.41
1643 1649 5.606505 GGGTCATTTTCTCTCTAGATCCAC 58.393 45.833 0.00 0.00 0.00 4.02
1644 1650 5.454045 GGGTCATTTTCTCTCTAGATCCACC 60.454 48.000 0.00 0.00 0.00 4.61
1645 1651 5.454045 GGTCATTTTCTCTCTAGATCCACCC 60.454 48.000 0.00 0.00 0.00 4.61
1646 1652 4.656112 TCATTTTCTCTCTAGATCCACCCC 59.344 45.833 0.00 0.00 0.00 4.95
1647 1653 4.354208 TTTTCTCTCTAGATCCACCCCT 57.646 45.455 0.00 0.00 0.00 4.79
1648 1654 5.483174 TTTTCTCTCTAGATCCACCCCTA 57.517 43.478 0.00 0.00 0.00 3.53
1649 1655 4.456662 TTCTCTCTAGATCCACCCCTAC 57.543 50.000 0.00 0.00 0.00 3.18
1650 1656 3.682455 TCTCTCTAGATCCACCCCTACT 58.318 50.000 0.00 0.00 0.00 2.57
1651 1657 3.653836 TCTCTCTAGATCCACCCCTACTC 59.346 52.174 0.00 0.00 0.00 2.59
1652 1658 2.717515 TCTCTAGATCCACCCCTACTCC 59.282 54.545 0.00 0.00 0.00 3.85
1653 1659 2.719705 CTCTAGATCCACCCCTACTCCT 59.280 54.545 0.00 0.00 0.00 3.69
1654 1660 2.447429 TCTAGATCCACCCCTACTCCTG 59.553 54.545 0.00 0.00 0.00 3.86
1655 1661 1.019650 AGATCCACCCCTACTCCTGT 58.980 55.000 0.00 0.00 0.00 4.00
1666 1672 1.405821 CTACTCCTGTCGCCTTGTAGG 59.594 57.143 0.00 0.00 38.80 3.18
1669 1675 0.541063 TCCTGTCGCCTTGTAGGTCA 60.541 55.000 0.00 0.00 37.80 4.02
1716 1722 0.526211 AGTATGTCGAGTTCGCTGCA 59.474 50.000 0.00 0.00 39.60 4.41
1724 1730 1.965754 GAGTTCGCTGCAGAGGGGAT 61.966 60.000 20.43 1.19 32.93 3.85
1726 1732 3.035173 TTCGCTGCAGAGGGGATGG 62.035 63.158 20.43 0.00 32.93 3.51
1774 1780 1.379146 GGGGAGTTGGTGGTTCTCC 59.621 63.158 0.00 0.00 44.78 3.71
1799 1805 1.794701 CATGGCGTAATCTCGGTGATG 59.205 52.381 0.00 0.00 35.21 3.07
1808 1814 0.904649 TCTCGGTGATGTGATGCCTT 59.095 50.000 0.00 0.00 0.00 4.35
1811 1817 0.734889 CGGTGATGTGATGCCTTTCC 59.265 55.000 0.00 0.00 0.00 3.13
1816 1822 4.262592 GGTGATGTGATGCCTTTCCTTTTT 60.263 41.667 0.00 0.00 0.00 1.94
1817 1823 4.925646 GTGATGTGATGCCTTTCCTTTTTC 59.074 41.667 0.00 0.00 0.00 2.29
1818 1824 4.834496 TGATGTGATGCCTTTCCTTTTTCT 59.166 37.500 0.00 0.00 0.00 2.52
1819 1825 6.009589 TGATGTGATGCCTTTCCTTTTTCTA 58.990 36.000 0.00 0.00 0.00 2.10
1828 1838 7.657336 TGCCTTTCCTTTTTCTAGTGTATTTG 58.343 34.615 0.00 0.00 0.00 2.32
1839 1849 5.546526 TCTAGTGTATTTGTGTGCATGTGA 58.453 37.500 0.00 0.00 0.00 3.58
1840 1850 6.172630 TCTAGTGTATTTGTGTGCATGTGAT 58.827 36.000 0.00 0.00 0.00 3.06
1915 1925 5.843673 TTTGATGACCAAACTAGCAAACA 57.156 34.783 0.00 0.00 39.65 2.83
1916 1926 6.403866 TTTGATGACCAAACTAGCAAACAT 57.596 33.333 0.00 0.00 39.65 2.71
1918 1928 3.641437 TGACCAAACTAGCAAACATGC 57.359 42.857 0.00 0.00 0.00 4.06
1919 1929 2.295909 TGACCAAACTAGCAAACATGCC 59.704 45.455 0.00 0.00 34.90 4.40
1921 1931 1.402720 CCAAACTAGCAAACATGCCCG 60.403 52.381 0.00 0.00 34.90 6.13
1922 1932 1.269448 CAAACTAGCAAACATGCCCGT 59.731 47.619 0.00 0.00 34.90 5.28
1923 1933 0.881118 AACTAGCAAACATGCCCGTG 59.119 50.000 0.00 0.00 34.90 4.94
1924 1934 1.137404 CTAGCAAACATGCCCGTGC 59.863 57.895 0.00 0.00 37.26 5.34
1927 1937 2.334653 CAAACATGCCCGTGCGTT 59.665 55.556 0.00 0.00 41.78 4.84
1928 1938 2.015627 CAAACATGCCCGTGCGTTG 61.016 57.895 0.00 0.00 41.78 4.10
1929 1939 3.839642 AAACATGCCCGTGCGTTGC 62.840 57.895 0.00 0.00 41.78 4.17
1931 1941 4.340019 CATGCCCGTGCGTTGCAA 62.340 61.111 0.00 0.00 41.47 4.08
1932 1942 4.341502 ATGCCCGTGCGTTGCAAC 62.342 61.111 19.89 19.89 41.47 4.17
1949 2141 7.679659 GTTGCAACGGGAGAAAAATAATATC 57.320 36.000 14.90 0.00 0.00 1.63
1951 2143 7.581213 TGCAACGGGAGAAAAATAATATCAT 57.419 32.000 0.00 0.00 0.00 2.45
1954 2146 8.999431 GCAACGGGAGAAAAATAATATCATAGA 58.001 33.333 0.00 0.00 0.00 1.98
1957 2149 9.930693 ACGGGAGAAAAATAATATCATAGAGAC 57.069 33.333 0.00 0.00 0.00 3.36
1958 2150 9.372369 CGGGAGAAAAATAATATCATAGAGACC 57.628 37.037 0.00 0.00 0.00 3.85
1986 2178 5.697826 GCAATAAGCATAGCTCAAGAATCC 58.302 41.667 0.00 0.00 44.79 3.01
1987 2179 5.335504 GCAATAAGCATAGCTCAAGAATCCC 60.336 44.000 0.00 0.00 44.79 3.85
1988 2180 3.939740 AAGCATAGCTCAAGAATCCCA 57.060 42.857 0.00 0.00 38.25 4.37
1989 2181 3.939740 AGCATAGCTCAAGAATCCCAA 57.060 42.857 0.00 0.00 30.62 4.12
1990 2182 4.450305 AGCATAGCTCAAGAATCCCAAT 57.550 40.909 0.00 0.00 30.62 3.16
1991 2183 5.573380 AGCATAGCTCAAGAATCCCAATA 57.427 39.130 0.00 0.00 30.62 1.90
1993 2185 4.699257 GCATAGCTCAAGAATCCCAATAGG 59.301 45.833 0.00 0.00 0.00 2.57
1995 2187 4.162040 AGCTCAAGAATCCCAATAGGTG 57.838 45.455 0.00 0.00 36.75 4.00
1997 2189 3.889815 CTCAAGAATCCCAATAGGTGCA 58.110 45.455 0.00 0.00 36.75 4.57
1998 2190 4.467769 CTCAAGAATCCCAATAGGTGCAT 58.532 43.478 0.00 0.00 36.75 3.96
2001 2193 3.825328 AGAATCCCAATAGGTGCATGTC 58.175 45.455 0.00 0.00 36.75 3.06
2002 2194 2.260844 ATCCCAATAGGTGCATGTCG 57.739 50.000 0.00 0.00 36.75 4.35
2004 2196 1.016627 CCCAATAGGTGCATGTCGTG 58.983 55.000 0.00 0.00 0.00 4.35
2018 2210 5.920085 CATGTCGTGCATTTGAAACATAG 57.080 39.130 0.00 0.00 35.19 2.23
2021 2213 4.274705 TGTCGTGCATTTGAAACATAGTGT 59.725 37.500 0.00 0.00 0.00 3.55
2022 2214 4.846137 GTCGTGCATTTGAAACATAGTGTC 59.154 41.667 0.00 0.00 0.00 3.67
2024 2216 4.485163 GTGCATTTGAAACATAGTGTCCC 58.515 43.478 0.00 0.00 0.00 4.46
2025 2217 4.022416 GTGCATTTGAAACATAGTGTCCCA 60.022 41.667 0.00 0.00 0.00 4.37
2027 2219 4.022416 GCATTTGAAACATAGTGTCCCACA 60.022 41.667 0.00 0.00 36.74 4.17
2028 2220 5.336690 GCATTTGAAACATAGTGTCCCACAT 60.337 40.000 0.00 0.00 36.74 3.21
2029 2221 5.703978 TTTGAAACATAGTGTCCCACATG 57.296 39.130 0.00 0.00 36.74 3.21
2030 2222 4.365514 TGAAACATAGTGTCCCACATGT 57.634 40.909 0.00 0.00 37.54 3.21
2031 2223 5.491323 TGAAACATAGTGTCCCACATGTA 57.509 39.130 0.00 0.00 36.18 2.29
2032 2224 6.061022 TGAAACATAGTGTCCCACATGTAT 57.939 37.500 0.00 0.00 36.18 2.29
2034 2226 5.692115 AACATAGTGTCCCACATGTATCA 57.308 39.130 0.00 0.00 36.18 2.15
2035 2227 5.894298 ACATAGTGTCCCACATGTATCAT 57.106 39.130 0.00 0.00 35.80 2.45
2036 2228 5.858381 ACATAGTGTCCCACATGTATCATC 58.142 41.667 0.00 0.00 35.80 2.92
2038 2230 1.867233 GTGTCCCACATGTATCATCGC 59.133 52.381 0.00 0.00 34.08 4.58
2039 2231 1.762370 TGTCCCACATGTATCATCGCT 59.238 47.619 0.00 0.00 0.00 4.93
2040 2232 2.170397 TGTCCCACATGTATCATCGCTT 59.830 45.455 0.00 0.00 0.00 4.68
2041 2233 3.386402 TGTCCCACATGTATCATCGCTTA 59.614 43.478 0.00 0.00 0.00 3.09
2044 2236 3.614176 CCCACATGTATCATCGCTTATCG 59.386 47.826 0.00 0.00 40.15 2.92
2046 2238 4.324669 CCACATGTATCATCGCTTATCGTC 59.675 45.833 0.00 0.00 39.67 4.20
2047 2239 4.324669 CACATGTATCATCGCTTATCGTCC 59.675 45.833 0.00 0.00 39.67 4.79
2048 2240 4.218635 ACATGTATCATCGCTTATCGTCCT 59.781 41.667 0.00 0.00 39.67 3.85
2049 2241 4.848562 TGTATCATCGCTTATCGTCCTT 57.151 40.909 0.00 0.00 39.67 3.36
2050 2242 4.795268 TGTATCATCGCTTATCGTCCTTC 58.205 43.478 0.00 0.00 39.67 3.46
2051 2243 2.795175 TCATCGCTTATCGTCCTTCC 57.205 50.000 0.00 0.00 39.67 3.46
2052 2244 1.340248 TCATCGCTTATCGTCCTTCCC 59.660 52.381 0.00 0.00 39.67 3.97
2053 2245 0.314302 ATCGCTTATCGTCCTTCCCG 59.686 55.000 0.00 0.00 39.67 5.14
2054 2246 1.033746 TCGCTTATCGTCCTTCCCGT 61.034 55.000 0.00 0.00 39.67 5.28
2055 2247 0.594284 CGCTTATCGTCCTTCCCGTC 60.594 60.000 0.00 0.00 0.00 4.79
2056 2248 0.249363 GCTTATCGTCCTTCCCGTCC 60.249 60.000 0.00 0.00 0.00 4.79
2057 2249 0.388294 CTTATCGTCCTTCCCGTCCC 59.612 60.000 0.00 0.00 0.00 4.46
2058 2250 1.386525 TTATCGTCCTTCCCGTCCCG 61.387 60.000 0.00 0.00 0.00 5.14
2075 2267 4.295119 GCGGACAGTGGTCGTGGT 62.295 66.667 8.70 0.00 45.28 4.16
2076 2268 2.355837 CGGACAGTGGTCGTGGTG 60.356 66.667 0.00 0.00 45.28 4.17
2077 2269 2.819550 GGACAGTGGTCGTGGTGT 59.180 61.111 0.00 0.00 45.28 4.16
2078 2270 1.798234 CGGACAGTGGTCGTGGTGTA 61.798 60.000 0.00 0.00 45.28 2.90
2079 2271 0.319297 GGACAGTGGTCGTGGTGTAC 60.319 60.000 0.00 0.00 45.28 2.90
2089 2281 2.129823 CGTGGTGTACGCCTAATAGG 57.870 55.000 25.27 0.99 46.92 2.57
2090 2282 1.677576 CGTGGTGTACGCCTAATAGGA 59.322 52.381 25.27 0.96 46.92 2.94
2091 2283 2.099592 CGTGGTGTACGCCTAATAGGAA 59.900 50.000 25.27 0.18 46.92 3.36
2092 2284 3.451526 GTGGTGTACGCCTAATAGGAAC 58.548 50.000 25.27 9.50 37.67 3.62
2093 2285 3.098377 TGGTGTACGCCTAATAGGAACA 58.902 45.455 25.27 7.88 37.67 3.18
2094 2286 3.119029 TGGTGTACGCCTAATAGGAACAC 60.119 47.826 25.27 21.60 40.89 3.32
2095 2287 3.451526 GTGTACGCCTAATAGGAACACC 58.548 50.000 20.21 9.41 38.24 4.16
2096 2288 2.099592 TGTACGCCTAATAGGAACACCG 59.900 50.000 11.13 6.13 37.67 4.94
2097 2289 1.188863 ACGCCTAATAGGAACACCGT 58.811 50.000 11.13 6.80 37.67 4.83
2098 2290 1.134907 ACGCCTAATAGGAACACCGTG 60.135 52.381 11.13 0.00 37.67 4.94
2099 2291 1.135527 CGCCTAATAGGAACACCGTGA 59.864 52.381 11.13 0.00 37.67 4.35
2100 2292 2.417651 CGCCTAATAGGAACACCGTGAA 60.418 50.000 11.13 0.00 37.67 3.18
2101 2293 2.934553 GCCTAATAGGAACACCGTGAAC 59.065 50.000 11.13 0.00 37.67 3.18
2102 2294 3.618019 GCCTAATAGGAACACCGTGAACA 60.618 47.826 11.13 0.00 37.67 3.18
2103 2295 4.766375 CCTAATAGGAACACCGTGAACAT 58.234 43.478 5.28 0.00 37.67 2.71
2104 2296 5.682990 GCCTAATAGGAACACCGTGAACATA 60.683 44.000 11.13 1.47 37.67 2.29
2105 2297 6.522054 CCTAATAGGAACACCGTGAACATAT 58.478 40.000 5.28 3.71 37.67 1.78
2106 2298 6.423905 CCTAATAGGAACACCGTGAACATATG 59.576 42.308 5.28 0.00 37.67 1.78
2107 2299 2.985896 AGGAACACCGTGAACATATGG 58.014 47.619 5.28 0.00 0.00 2.74
2108 2300 2.304761 AGGAACACCGTGAACATATGGT 59.695 45.455 5.28 0.00 40.57 3.55
2109 2301 3.078837 GGAACACCGTGAACATATGGTT 58.921 45.455 5.28 0.00 44.10 3.67
2110 2302 4.020039 AGGAACACCGTGAACATATGGTTA 60.020 41.667 5.28 0.00 40.63 2.85
2111 2303 4.696402 GGAACACCGTGAACATATGGTTAA 59.304 41.667 5.28 0.00 40.63 2.01
2112 2304 5.355910 GGAACACCGTGAACATATGGTTAAT 59.644 40.000 5.28 0.00 40.63 1.40
2113 2305 6.431198 AACACCGTGAACATATGGTTAATC 57.569 37.500 5.28 0.00 40.63 1.75
2114 2306 5.741011 ACACCGTGAACATATGGTTAATCT 58.259 37.500 5.28 0.00 40.63 2.40
2115 2307 6.177610 ACACCGTGAACATATGGTTAATCTT 58.822 36.000 5.28 0.00 40.63 2.40
2116 2308 7.332557 ACACCGTGAACATATGGTTAATCTTA 58.667 34.615 5.28 0.00 40.63 2.10
2117 2309 7.825270 ACACCGTGAACATATGGTTAATCTTAA 59.175 33.333 5.28 0.00 40.63 1.85
2118 2310 8.335356 CACCGTGAACATATGGTTAATCTTAAG 58.665 37.037 7.80 0.00 40.63 1.85
2119 2311 8.262227 ACCGTGAACATATGGTTAATCTTAAGA 58.738 33.333 7.82 7.82 40.63 2.10
2120 2312 9.273016 CCGTGAACATATGGTTAATCTTAAGAT 57.727 33.333 12.37 12.37 40.63 2.40
2130 2322 8.648557 TGGTTAATCTTAAGATGATGAGTTCG 57.351 34.615 18.61 0.00 34.49 3.95
2131 2323 7.710907 TGGTTAATCTTAAGATGATGAGTTCGG 59.289 37.037 18.61 0.00 34.49 4.30
2132 2324 7.307455 GGTTAATCTTAAGATGATGAGTTCGGC 60.307 40.741 18.61 0.43 34.49 5.54
2133 2325 4.060038 TCTTAAGATGATGAGTTCGGCC 57.940 45.455 0.00 0.00 0.00 6.13
2134 2326 3.450817 TCTTAAGATGATGAGTTCGGCCA 59.549 43.478 2.24 0.00 0.00 5.36
2135 2327 4.101585 TCTTAAGATGATGAGTTCGGCCAT 59.898 41.667 2.24 0.00 0.00 4.40
2136 2328 2.540265 AGATGATGAGTTCGGCCATC 57.460 50.000 2.24 0.00 39.55 3.51
2137 2329 1.143305 GATGATGAGTTCGGCCATCG 58.857 55.000 2.24 0.00 41.40 3.84
2138 2330 0.882042 ATGATGAGTTCGGCCATCGC 60.882 55.000 2.24 0.00 41.40 4.58
2139 2331 1.521457 GATGAGTTCGGCCATCGCA 60.521 57.895 2.24 0.11 39.05 5.10
2140 2332 0.882042 GATGAGTTCGGCCATCGCAT 60.882 55.000 2.24 5.63 39.05 4.73
2141 2333 1.162181 ATGAGTTCGGCCATCGCATG 61.162 55.000 2.24 0.00 39.05 4.06
2142 2334 1.521457 GAGTTCGGCCATCGCATGA 60.521 57.895 2.24 0.00 39.05 3.07
2143 2335 1.766143 GAGTTCGGCCATCGCATGAC 61.766 60.000 2.24 0.00 39.05 3.06
2144 2336 1.815421 GTTCGGCCATCGCATGACT 60.815 57.895 2.24 0.00 39.05 3.41
2145 2337 1.521457 TTCGGCCATCGCATGACTC 60.521 57.895 2.24 0.00 39.05 3.36
2146 2338 2.202919 CGGCCATCGCATGACTCA 60.203 61.111 2.24 0.00 36.38 3.41
2147 2339 2.528743 CGGCCATCGCATGACTCAC 61.529 63.158 2.24 0.00 36.38 3.51
2148 2340 1.153289 GGCCATCGCATGACTCACT 60.153 57.895 0.00 0.00 36.38 3.41
2149 2341 0.104855 GGCCATCGCATGACTCACTA 59.895 55.000 0.00 0.00 36.38 2.74
2150 2342 1.495878 GCCATCGCATGACTCACTAG 58.504 55.000 0.00 0.00 34.03 2.57
2151 2343 1.495878 CCATCGCATGACTCACTAGC 58.504 55.000 0.00 0.00 0.00 3.42
2152 2344 1.202452 CCATCGCATGACTCACTAGCA 60.202 52.381 0.00 0.00 0.00 3.49
2153 2345 2.547430 CCATCGCATGACTCACTAGCAT 60.547 50.000 0.00 0.00 0.00 3.79
2154 2346 2.967599 TCGCATGACTCACTAGCATT 57.032 45.000 0.00 0.00 0.00 3.56
2155 2347 2.814269 TCGCATGACTCACTAGCATTC 58.186 47.619 0.00 0.00 0.00 2.67
2156 2348 2.166254 TCGCATGACTCACTAGCATTCA 59.834 45.455 0.00 0.00 0.00 2.57
2157 2349 2.931969 CGCATGACTCACTAGCATTCAA 59.068 45.455 0.00 0.00 0.00 2.69
2158 2350 3.242220 CGCATGACTCACTAGCATTCAAC 60.242 47.826 0.00 0.00 0.00 3.18
2159 2351 3.937706 GCATGACTCACTAGCATTCAACT 59.062 43.478 0.00 0.00 0.00 3.16
2160 2352 4.201792 GCATGACTCACTAGCATTCAACTG 60.202 45.833 0.00 0.00 0.00 3.16
2161 2353 3.329386 TGACTCACTAGCATTCAACTGC 58.671 45.455 0.00 0.00 42.62 4.40
2162 2354 2.341257 ACTCACTAGCATTCAACTGCG 58.659 47.619 0.00 0.00 46.86 5.18
2163 2355 1.061711 CTCACTAGCATTCAACTGCGC 59.938 52.381 0.00 0.00 46.86 6.09
2164 2356 1.081892 CACTAGCATTCAACTGCGCT 58.918 50.000 9.73 0.00 46.86 5.92
2165 2357 2.094234 TCACTAGCATTCAACTGCGCTA 60.094 45.455 9.73 0.00 46.86 4.26
2167 2359 2.544685 CTAGCATTCAACTGCGCTAGT 58.455 47.619 9.73 7.89 45.71 2.57
2168 2360 1.081892 AGCATTCAACTGCGCTAGTG 58.918 50.000 9.73 3.47 46.86 2.74
2169 2361 1.078709 GCATTCAACTGCGCTAGTGA 58.921 50.000 9.73 6.14 40.26 3.41
2170 2362 1.464608 GCATTCAACTGCGCTAGTGAA 59.535 47.619 18.04 18.04 40.26 3.18
2171 2363 2.095768 GCATTCAACTGCGCTAGTGAAA 60.096 45.455 19.11 13.51 40.26 2.69
2172 2364 3.609175 GCATTCAACTGCGCTAGTGAAAA 60.609 43.478 19.11 11.71 40.26 2.29
2173 2365 4.536065 CATTCAACTGCGCTAGTGAAAAA 58.464 39.130 19.11 9.93 40.26 1.94
2226 2418 7.585867 TCTCATTGAGATATAGACGTAAGTGC 58.414 38.462 12.38 0.00 42.27 4.40
2227 2419 7.308649 TCTCATTGAGATATAGACGTAAGTGCC 60.309 40.741 12.38 0.00 42.27 5.01
2235 2427 3.688136 CGTAAGTGCCGTCATCCG 58.312 61.111 0.00 0.00 0.00 4.18
2236 2428 1.153901 CGTAAGTGCCGTCATCCGT 60.154 57.895 0.00 0.00 33.66 4.69
2237 2429 1.410737 CGTAAGTGCCGTCATCCGTG 61.411 60.000 0.00 0.00 33.66 4.94
2238 2430 0.108992 GTAAGTGCCGTCATCCGTGA 60.109 55.000 0.00 0.00 33.66 4.35
2239 2431 0.172578 TAAGTGCCGTCATCCGTGAG 59.827 55.000 0.00 0.00 34.36 3.51
2240 2432 3.188786 GTGCCGTCATCCGTGAGC 61.189 66.667 0.00 0.00 34.36 4.26
2241 2433 3.381983 TGCCGTCATCCGTGAGCT 61.382 61.111 0.00 0.00 34.36 4.09
2242 2434 2.049767 TGCCGTCATCCGTGAGCTA 61.050 57.895 0.00 0.00 34.36 3.32
2243 2435 1.589196 GCCGTCATCCGTGAGCTAC 60.589 63.158 0.00 0.00 34.36 3.58
2244 2436 2.005960 GCCGTCATCCGTGAGCTACT 62.006 60.000 0.00 0.00 34.36 2.57
2245 2437 0.029567 CCGTCATCCGTGAGCTACTC 59.970 60.000 0.00 0.00 34.36 2.59
2246 2438 0.029567 CGTCATCCGTGAGCTACTCC 59.970 60.000 0.00 0.00 34.36 3.85
2247 2439 0.386113 GTCATCCGTGAGCTACTCCC 59.614 60.000 0.00 0.00 34.36 4.30
2248 2440 0.259065 TCATCCGTGAGCTACTCCCT 59.741 55.000 0.00 0.00 0.00 4.20
2249 2441 0.671251 CATCCGTGAGCTACTCCCTC 59.329 60.000 0.00 0.00 0.00 4.30
2250 2442 0.468400 ATCCGTGAGCTACTCCCTCC 60.468 60.000 0.00 0.00 0.00 4.30
2251 2443 1.379977 CCGTGAGCTACTCCCTCCA 60.380 63.158 0.00 0.00 0.00 3.86
2252 2444 0.970937 CCGTGAGCTACTCCCTCCAA 60.971 60.000 0.00 0.00 0.00 3.53
2253 2445 0.895530 CGTGAGCTACTCCCTCCAAA 59.104 55.000 0.00 0.00 0.00 3.28
2254 2446 1.404315 CGTGAGCTACTCCCTCCAAAC 60.404 57.143 0.00 0.00 0.00 2.93
2255 2447 1.623811 GTGAGCTACTCCCTCCAAACA 59.376 52.381 0.00 0.00 0.00 2.83
2256 2448 1.902508 TGAGCTACTCCCTCCAAACAG 59.097 52.381 0.00 0.00 0.00 3.16
2257 2449 1.903183 GAGCTACTCCCTCCAAACAGT 59.097 52.381 0.00 0.00 0.00 3.55
2258 2450 1.625818 AGCTACTCCCTCCAAACAGTG 59.374 52.381 0.00 0.00 0.00 3.66
2259 2451 1.623811 GCTACTCCCTCCAAACAGTGA 59.376 52.381 0.00 0.00 0.00 3.41
2260 2452 2.038557 GCTACTCCCTCCAAACAGTGAA 59.961 50.000 0.00 0.00 0.00 3.18
2261 2453 3.496160 GCTACTCCCTCCAAACAGTGAAA 60.496 47.826 0.00 0.00 0.00 2.69
2262 2454 3.214696 ACTCCCTCCAAACAGTGAAAG 57.785 47.619 0.00 0.00 0.00 2.62
2263 2455 2.158608 ACTCCCTCCAAACAGTGAAAGG 60.159 50.000 0.00 0.00 32.48 3.11
2264 2456 2.106511 CTCCCTCCAAACAGTGAAAGGA 59.893 50.000 0.00 0.00 33.81 3.36
2265 2457 2.106511 TCCCTCCAAACAGTGAAAGGAG 59.893 50.000 17.06 17.06 44.26 3.69
2266 2458 2.106511 CCCTCCAAACAGTGAAAGGAGA 59.893 50.000 22.32 2.86 46.89 3.71
2267 2459 3.406764 CCTCCAAACAGTGAAAGGAGAG 58.593 50.000 22.32 13.20 46.89 3.20
2268 2460 3.406764 CTCCAAACAGTGAAAGGAGAGG 58.593 50.000 18.37 1.77 46.89 3.69
2269 2461 3.045634 TCCAAACAGTGAAAGGAGAGGA 58.954 45.455 0.00 0.00 0.00 3.71
2270 2462 3.458118 TCCAAACAGTGAAAGGAGAGGAA 59.542 43.478 0.00 0.00 0.00 3.36
2271 2463 3.817647 CCAAACAGTGAAAGGAGAGGAAG 59.182 47.826 0.00 0.00 0.00 3.46
2272 2464 3.778954 AACAGTGAAAGGAGAGGAAGG 57.221 47.619 0.00 0.00 0.00 3.46
2273 2465 2.977808 ACAGTGAAAGGAGAGGAAGGA 58.022 47.619 0.00 0.00 0.00 3.36
2274 2466 3.318313 ACAGTGAAAGGAGAGGAAGGAA 58.682 45.455 0.00 0.00 0.00 3.36
2275 2467 3.716872 ACAGTGAAAGGAGAGGAAGGAAA 59.283 43.478 0.00 0.00 0.00 3.13
2276 2468 4.166144 ACAGTGAAAGGAGAGGAAGGAAAA 59.834 41.667 0.00 0.00 0.00 2.29
2277 2469 4.517075 CAGTGAAAGGAGAGGAAGGAAAAC 59.483 45.833 0.00 0.00 0.00 2.43
2278 2470 4.166144 AGTGAAAGGAGAGGAAGGAAAACA 59.834 41.667 0.00 0.00 0.00 2.83
2279 2471 4.887655 GTGAAAGGAGAGGAAGGAAAACAA 59.112 41.667 0.00 0.00 0.00 2.83
2280 2472 5.359860 GTGAAAGGAGAGGAAGGAAAACAAA 59.640 40.000 0.00 0.00 0.00 2.83
2281 2473 6.040955 GTGAAAGGAGAGGAAGGAAAACAAAT 59.959 38.462 0.00 0.00 0.00 2.32
2282 2474 6.611236 TGAAAGGAGAGGAAGGAAAACAAATT 59.389 34.615 0.00 0.00 0.00 1.82
2283 2475 7.125659 TGAAAGGAGAGGAAGGAAAACAAATTT 59.874 33.333 0.00 0.00 0.00 1.82
2284 2476 6.410942 AGGAGAGGAAGGAAAACAAATTTG 57.589 37.500 16.67 16.67 0.00 2.32
2285 2477 5.899547 AGGAGAGGAAGGAAAACAAATTTGT 59.100 36.000 18.13 18.13 44.72 2.83
2306 2498 6.942532 TGTTTCATCCTATTACTCATTGGC 57.057 37.500 0.00 0.00 0.00 4.52
2307 2499 6.662755 TGTTTCATCCTATTACTCATTGGCT 58.337 36.000 0.00 0.00 0.00 4.75
2308 2500 7.801104 TGTTTCATCCTATTACTCATTGGCTA 58.199 34.615 0.00 0.00 0.00 3.93
2309 2501 7.933577 TGTTTCATCCTATTACTCATTGGCTAG 59.066 37.037 0.00 0.00 0.00 3.42
2310 2502 6.042638 TCATCCTATTACTCATTGGCTAGC 57.957 41.667 6.04 6.04 0.00 3.42
2311 2503 4.891992 TCCTATTACTCATTGGCTAGCC 57.108 45.455 27.71 27.71 0.00 3.93
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
91 92 7.493645 CAGTGTCATCATGCTCTTCAGTTATAA 59.506 37.037 0.00 0.00 0.00 0.98
120 121 3.418687 TGCACAGCATCCTCCCAT 58.581 55.556 0.00 0.00 31.71 4.00
135 136 4.030452 GCCGCTTCGCCCATATGC 62.030 66.667 0.00 0.00 0.00 3.14
210 211 2.218759 GCTATTCGTGGTAGACAATGCG 59.781 50.000 0.00 0.00 0.00 4.73
241 242 1.725164 CCGAAGAACCGACTAAGCAAC 59.275 52.381 0.00 0.00 0.00 4.17
242 243 1.614903 TCCGAAGAACCGACTAAGCAA 59.385 47.619 0.00 0.00 0.00 3.91
243 244 1.068055 GTCCGAAGAACCGACTAAGCA 60.068 52.381 0.00 0.00 0.00 3.91
244 245 1.626747 GTCCGAAGAACCGACTAAGC 58.373 55.000 0.00 0.00 0.00 3.09
245 246 2.274920 GGTCCGAAGAACCGACTAAG 57.725 55.000 0.00 0.00 0.00 2.18
252 253 0.535797 AAGATCCGGTCCGAAGAACC 59.464 55.000 14.39 0.00 0.00 3.62
253 254 1.798079 CGAAGATCCGGTCCGAAGAAC 60.798 57.143 14.39 0.99 0.00 3.01
254 255 0.454600 CGAAGATCCGGTCCGAAGAA 59.545 55.000 14.39 0.00 0.00 2.52
255 256 1.381928 CCGAAGATCCGGTCCGAAGA 61.382 60.000 14.39 2.21 44.23 2.87
256 257 1.065928 CCGAAGATCCGGTCCGAAG 59.934 63.158 14.39 0.00 44.23 3.79
257 258 3.203442 CCGAAGATCCGGTCCGAA 58.797 61.111 14.39 0.00 44.23 4.30
264 265 4.547367 GGCCCCACCGAAGATCCG 62.547 72.222 0.00 0.00 0.00 4.18
265 266 3.407967 TGGCCCCACCGAAGATCC 61.408 66.667 0.00 0.00 43.94 3.36
266 267 2.124695 GTGGCCCCACCGAAGATC 60.125 66.667 0.00 0.00 43.94 2.75
274 275 3.443045 CAATGCGAGTGGCCCCAC 61.443 66.667 9.42 9.42 46.50 4.61
275 276 3.918253 GACAATGCGAGTGGCCCCA 62.918 63.158 0.00 0.00 42.61 4.96
276 277 2.252072 TAGACAATGCGAGTGGCCCC 62.252 60.000 0.00 0.00 42.61 5.80
277 278 1.090052 GTAGACAATGCGAGTGGCCC 61.090 60.000 0.00 0.00 42.61 5.80
278 279 1.090052 GGTAGACAATGCGAGTGGCC 61.090 60.000 0.00 0.00 42.61 5.36
279 280 0.391130 TGGTAGACAATGCGAGTGGC 60.391 55.000 0.00 0.00 43.96 5.01
280 281 1.359848 GTGGTAGACAATGCGAGTGG 58.640 55.000 0.00 0.00 0.00 4.00
281 282 0.992072 CGTGGTAGACAATGCGAGTG 59.008 55.000 0.00 0.00 0.00 3.51
282 283 0.885879 TCGTGGTAGACAATGCGAGT 59.114 50.000 0.00 0.00 0.00 4.18
283 284 1.990799 TTCGTGGTAGACAATGCGAG 58.009 50.000 0.00 0.00 0.00 5.03
284 285 2.665649 ATTCGTGGTAGACAATGCGA 57.334 45.000 0.00 0.00 0.00 5.10
285 286 2.218759 GCTATTCGTGGTAGACAATGCG 59.781 50.000 0.00 0.00 0.00 4.73
286 287 3.458189 AGCTATTCGTGGTAGACAATGC 58.542 45.455 0.00 0.00 0.00 3.56
287 288 4.051922 GGAGCTATTCGTGGTAGACAATG 58.948 47.826 0.00 0.00 0.00 2.82
288 289 3.961408 AGGAGCTATTCGTGGTAGACAAT 59.039 43.478 0.00 0.00 0.00 2.71
289 290 3.362706 AGGAGCTATTCGTGGTAGACAA 58.637 45.455 0.00 0.00 0.00 3.18
290 291 3.014304 AGGAGCTATTCGTGGTAGACA 57.986 47.619 0.00 0.00 0.00 3.41
291 292 4.388378 AAAGGAGCTATTCGTGGTAGAC 57.612 45.455 0.00 0.00 0.00 2.59
292 293 4.222145 ACAAAAGGAGCTATTCGTGGTAGA 59.778 41.667 0.00 0.00 0.00 2.59
293 294 4.330074 CACAAAAGGAGCTATTCGTGGTAG 59.670 45.833 0.00 0.00 0.00 3.18
294 295 4.250464 CACAAAAGGAGCTATTCGTGGTA 58.750 43.478 0.00 0.00 0.00 3.25
295 296 3.074412 CACAAAAGGAGCTATTCGTGGT 58.926 45.455 0.00 0.00 0.00 4.16
296 297 3.074412 ACACAAAAGGAGCTATTCGTGG 58.926 45.455 13.69 0.00 0.00 4.94
297 298 4.466828 CAACACAAAAGGAGCTATTCGTG 58.533 43.478 0.00 0.00 0.00 4.35
298 299 3.058224 GCAACACAAAAGGAGCTATTCGT 60.058 43.478 0.00 0.00 0.00 3.85
299 300 3.189287 AGCAACACAAAAGGAGCTATTCG 59.811 43.478 0.00 0.00 0.00 3.34
300 301 4.773323 AGCAACACAAAAGGAGCTATTC 57.227 40.909 0.00 0.00 0.00 1.75
301 302 5.770162 ACTAAGCAACACAAAAGGAGCTATT 59.230 36.000 0.00 0.00 0.00 1.73
302 303 5.316987 ACTAAGCAACACAAAAGGAGCTAT 58.683 37.500 0.00 0.00 0.00 2.97
303 304 4.714632 ACTAAGCAACACAAAAGGAGCTA 58.285 39.130 0.00 0.00 0.00 3.32
304 305 3.555966 ACTAAGCAACACAAAAGGAGCT 58.444 40.909 0.00 0.00 0.00 4.09
305 306 3.607078 CGACTAAGCAACACAAAAGGAGC 60.607 47.826 0.00 0.00 0.00 4.70
306 307 3.058914 CCGACTAAGCAACACAAAAGGAG 60.059 47.826 0.00 0.00 0.00 3.69
307 308 2.875933 CCGACTAAGCAACACAAAAGGA 59.124 45.455 0.00 0.00 0.00 3.36
308 309 2.616842 ACCGACTAAGCAACACAAAAGG 59.383 45.455 0.00 0.00 0.00 3.11
309 310 3.963383 ACCGACTAAGCAACACAAAAG 57.037 42.857 0.00 0.00 0.00 2.27
310 311 3.942748 AGAACCGACTAAGCAACACAAAA 59.057 39.130 0.00 0.00 0.00 2.44
311 312 3.537580 AGAACCGACTAAGCAACACAAA 58.462 40.909 0.00 0.00 0.00 2.83
312 313 3.188159 AGAACCGACTAAGCAACACAA 57.812 42.857 0.00 0.00 0.00 3.33
313 314 2.902705 AGAACCGACTAAGCAACACA 57.097 45.000 0.00 0.00 0.00 3.72
314 315 2.155155 CGAAGAACCGACTAAGCAACAC 59.845 50.000 0.00 0.00 0.00 3.32
315 316 2.400399 CGAAGAACCGACTAAGCAACA 58.600 47.619 0.00 0.00 0.00 3.33
337 338 4.152402 CGGATATAGGAGAAAATGCAACGG 59.848 45.833 0.00 0.00 0.00 4.44
399 400 4.649674 TGGTTGTAACACAAAATTAGGCCA 59.350 37.500 5.01 0.00 40.15 5.36
400 401 5.203060 TGGTTGTAACACAAAATTAGGCC 57.797 39.130 0.00 0.00 40.15 5.19
544 545 6.261118 CAGCAGCTAATCCTTTGTAACATTC 58.739 40.000 0.00 0.00 0.00 2.67
562 563 4.444056 TCGTTTGAAATAAAAAGCAGCAGC 59.556 37.500 0.00 0.00 42.56 5.25
563 564 5.458452 TGTCGTTTGAAATAAAAAGCAGCAG 59.542 36.000 0.00 0.00 0.00 4.24
564 565 5.344066 TGTCGTTTGAAATAAAAAGCAGCA 58.656 33.333 0.00 0.00 0.00 4.41
689 692 4.699257 TGCATGCAACATAGTACAACATGA 59.301 37.500 20.30 0.00 36.41 3.07
720 723 5.301835 AGGTTCTGACATTGATATCCCAG 57.698 43.478 0.00 0.86 0.00 4.45
723 726 6.291377 TGCTTAGGTTCTGACATTGATATCC 58.709 40.000 0.00 0.00 0.00 2.59
830 834 5.454966 AGTGGTTACTTTCATGGAAGGTTT 58.545 37.500 18.18 0.00 33.96 3.27
832 836 4.724279 AGTGGTTACTTTCATGGAAGGT 57.276 40.909 18.18 8.02 35.99 3.50
852 856 0.250295 TTGCTTCCCGTCACCTCAAG 60.250 55.000 0.00 0.00 0.00 3.02
903 907 4.647611 ACATCGAGGTTAATTTGGTGTCA 58.352 39.130 0.00 0.00 0.00 3.58
926 930 7.492669 GCAGAGTGCACCGATTTATATATACAT 59.507 37.037 14.63 0.00 44.26 2.29
927 931 6.811665 GCAGAGTGCACCGATTTATATATACA 59.188 38.462 14.63 0.00 44.26 2.29
951 955 2.092323 GTGATAAGAAACTGTGGGGGC 58.908 52.381 0.00 0.00 0.00 5.80
952 956 3.433306 TGTGATAAGAAACTGTGGGGG 57.567 47.619 0.00 0.00 0.00 5.40
965 969 3.866910 GCTATTCGACCCGTTTGTGATAA 59.133 43.478 0.00 0.00 0.00 1.75
966 970 3.131577 AGCTATTCGACCCGTTTGTGATA 59.868 43.478 0.00 0.00 0.00 2.15
991 995 2.630580 CCTTCCTCTCCATGGTAGCTAC 59.369 54.545 15.88 15.88 0.00 3.58
994 998 0.107643 GCCTTCCTCTCCATGGTAGC 59.892 60.000 12.58 0.80 0.00 3.58
1077 1081 4.814294 CCCACGCTGTAGACCGCC 62.814 72.222 0.00 0.00 0.00 6.13
1117 1121 2.581354 CTCCAGCCTCAAGGACGG 59.419 66.667 0.00 0.00 37.39 4.79
1121 1125 1.601171 CTGTCCTCCAGCCTCAAGG 59.399 63.158 0.00 0.00 33.59 3.61
1299 1303 9.155975 CCTATTCATTCAGATTATTTAGGGACG 57.844 37.037 0.00 0.00 0.00 4.79
1301 1305 8.109634 GGCCTATTCATTCAGATTATTTAGGGA 58.890 37.037 0.00 0.00 0.00 4.20
1316 1320 2.485479 CGGTAGTGCAGGCCTATTCATT 60.485 50.000 3.98 3.41 0.00 2.57
1345 1349 2.676121 CGGCCCAATGAGGTTGCA 60.676 61.111 0.00 0.00 36.46 4.08
1384 1388 6.959606 AGGCATATATCACTACATCCCTTT 57.040 37.500 0.00 0.00 0.00 3.11
1407 1411 2.230025 CCAACAATAACACGGCCATCAA 59.770 45.455 2.24 0.00 0.00 2.57
1409 1413 1.816224 ACCAACAATAACACGGCCATC 59.184 47.619 2.24 0.00 0.00 3.51
1410 1414 1.543802 CACCAACAATAACACGGCCAT 59.456 47.619 2.24 0.00 0.00 4.40
1421 1427 6.549364 TCAGTAGAAAAATCACCACCAACAAT 59.451 34.615 0.00 0.00 0.00 2.71
1422 1428 5.888724 TCAGTAGAAAAATCACCACCAACAA 59.111 36.000 0.00 0.00 0.00 2.83
1453 1459 1.259609 CTTCTTGGGCCATTGAAGCA 58.740 50.000 26.03 6.10 31.20 3.91
1472 1478 0.036294 GTACACCCCTGGACAAGAGC 60.036 60.000 0.00 0.00 30.44 4.09
1485 1491 2.614734 GGTAGCTCAACTTGGGTACACC 60.615 54.545 15.49 7.08 37.92 4.16
1486 1492 2.614734 GGGTAGCTCAACTTGGGTACAC 60.615 54.545 15.49 11.22 37.92 2.90
1487 1493 1.626825 GGGTAGCTCAACTTGGGTACA 59.373 52.381 15.49 0.00 37.92 2.90
1488 1494 1.405121 CGGGTAGCTCAACTTGGGTAC 60.405 57.143 0.00 9.42 36.19 3.34
1489 1495 0.899720 CGGGTAGCTCAACTTGGGTA 59.100 55.000 0.00 0.00 0.00 3.69
1490 1496 1.677552 CGGGTAGCTCAACTTGGGT 59.322 57.895 0.00 0.00 0.00 4.51
1491 1497 1.078426 CCGGGTAGCTCAACTTGGG 60.078 63.158 0.00 0.00 0.00 4.12
1492 1498 1.078426 CCCGGGTAGCTCAACTTGG 60.078 63.158 14.18 0.00 0.00 3.61
1493 1499 0.673644 CACCCGGGTAGCTCAACTTG 60.674 60.000 29.72 5.81 0.00 3.16
1494 1500 1.677552 CACCCGGGTAGCTCAACTT 59.322 57.895 29.72 0.00 0.00 2.66
1495 1501 2.955881 GCACCCGGGTAGCTCAACT 61.956 63.158 29.72 0.00 0.00 3.16
1496 1502 2.436115 GCACCCGGGTAGCTCAAC 60.436 66.667 29.72 6.09 0.00 3.18
1497 1503 2.925706 TGCACCCGGGTAGCTCAA 60.926 61.111 33.43 19.85 0.00 3.02
1498 1504 3.702048 GTGCACCCGGGTAGCTCA 61.702 66.667 33.43 23.71 0.00 4.26
1499 1505 3.665675 CTGTGCACCCGGGTAGCTC 62.666 68.421 33.43 30.79 0.00 4.09
1500 1506 3.706373 CTGTGCACCCGGGTAGCT 61.706 66.667 33.43 11.96 0.00 3.32
1501 1507 3.248446 TTCTGTGCACCCGGGTAGC 62.248 63.158 29.72 29.89 0.00 3.58
1502 1508 1.375523 GTTCTGTGCACCCGGGTAG 60.376 63.158 29.72 20.86 0.00 3.18
1503 1509 2.141448 TGTTCTGTGCACCCGGGTA 61.141 57.895 29.72 9.52 0.00 3.69
1504 1510 3.484806 TGTTCTGTGCACCCGGGT 61.485 61.111 24.16 24.16 0.00 5.28
1505 1511 2.978010 GTGTTCTGTGCACCCGGG 60.978 66.667 22.25 22.25 0.00 5.73
1510 1516 2.203153 ACCCGGTGTTCTGTGCAC 60.203 61.111 10.75 10.75 36.22 4.57
1511 1517 2.203139 CACCCGGTGTTCTGTGCA 60.203 61.111 9.64 0.00 0.00 4.57
1512 1518 3.660111 GCACCCGGTGTTCTGTGC 61.660 66.667 18.95 14.16 46.09 4.57
1513 1519 1.380403 TTTGCACCCGGTGTTCTGTG 61.380 55.000 18.95 0.62 35.75 3.66
1514 1520 0.681564 TTTTGCACCCGGTGTTCTGT 60.682 50.000 18.95 0.00 35.75 3.41
1515 1521 0.673437 ATTTTGCACCCGGTGTTCTG 59.327 50.000 18.95 0.00 35.75 3.02
1516 1522 0.673437 CATTTTGCACCCGGTGTTCT 59.327 50.000 18.95 0.00 35.75 3.01
1517 1523 0.943835 GCATTTTGCACCCGGTGTTC 60.944 55.000 18.95 3.90 44.26 3.18
1518 1524 1.068921 GCATTTTGCACCCGGTGTT 59.931 52.632 18.95 0.00 44.26 3.32
1519 1525 2.733945 GCATTTTGCACCCGGTGT 59.266 55.556 18.95 0.00 44.26 4.16
1528 1534 7.683746 TGAAACTTACAAAGAAAGCATTTTGC 58.316 30.769 0.00 0.00 45.46 3.68
1529 1535 9.640974 CATGAAACTTACAAAGAAAGCATTTTG 57.359 29.630 0.00 0.00 39.27 2.44
1530 1536 8.337532 GCATGAAACTTACAAAGAAAGCATTTT 58.662 29.630 0.00 0.00 39.27 1.82
1531 1537 7.495279 TGCATGAAACTTACAAAGAAAGCATTT 59.505 29.630 0.00 0.00 43.98 2.32
1532 1538 6.985645 TGCATGAAACTTACAAAGAAAGCATT 59.014 30.769 0.00 0.00 0.00 3.56
1533 1539 6.514947 TGCATGAAACTTACAAAGAAAGCAT 58.485 32.000 0.00 0.00 0.00 3.79
1534 1540 5.900425 TGCATGAAACTTACAAAGAAAGCA 58.100 33.333 0.00 0.00 0.00 3.91
1535 1541 6.826893 TTGCATGAAACTTACAAAGAAAGC 57.173 33.333 0.00 0.00 0.00 3.51
1546 1552 9.013229 TCACACTCTATATTTTGCATGAAACTT 57.987 29.630 0.00 0.00 0.00 2.66
1547 1553 8.454106 GTCACACTCTATATTTTGCATGAAACT 58.546 33.333 0.00 0.00 0.00 2.66
1548 1554 8.236586 TGTCACACTCTATATTTTGCATGAAAC 58.763 33.333 0.00 0.00 0.00 2.78
1549 1555 8.236586 GTGTCACACTCTATATTTTGCATGAAA 58.763 33.333 0.00 0.00 0.00 2.69
1550 1556 7.148255 GGTGTCACACTCTATATTTTGCATGAA 60.148 37.037 8.12 0.00 34.40 2.57
1551 1557 6.316140 GGTGTCACACTCTATATTTTGCATGA 59.684 38.462 8.12 0.00 34.40 3.07
1552 1558 6.458751 GGGTGTCACACTCTATATTTTGCATG 60.459 42.308 8.12 0.00 31.17 4.06
1553 1559 5.590259 GGGTGTCACACTCTATATTTTGCAT 59.410 40.000 8.12 0.00 31.17 3.96
1554 1560 4.941263 GGGTGTCACACTCTATATTTTGCA 59.059 41.667 8.12 0.00 31.17 4.08
1555 1561 4.335594 GGGGTGTCACACTCTATATTTTGC 59.664 45.833 7.99 0.00 34.84 3.68
1556 1562 5.496556 TGGGGTGTCACACTCTATATTTTG 58.503 41.667 7.99 0.00 34.84 2.44
1557 1563 5.772393 TGGGGTGTCACACTCTATATTTT 57.228 39.130 7.99 0.00 34.84 1.82
1558 1564 5.667626 AGATGGGGTGTCACACTCTATATTT 59.332 40.000 6.65 0.00 36.20 1.40
1559 1565 5.219739 AGATGGGGTGTCACACTCTATATT 58.780 41.667 6.65 0.00 36.20 1.28
1560 1566 4.820775 AGATGGGGTGTCACACTCTATAT 58.179 43.478 6.65 0.10 36.20 0.86
1561 1567 4.265856 AGATGGGGTGTCACACTCTATA 57.734 45.455 6.65 0.00 36.20 1.31
1562 1568 3.121929 AGATGGGGTGTCACACTCTAT 57.878 47.619 6.32 6.32 38.73 1.98
1563 1569 2.623418 AGATGGGGTGTCACACTCTA 57.377 50.000 7.99 0.70 34.84 2.43
1564 1570 1.734655 AAGATGGGGTGTCACACTCT 58.265 50.000 7.99 0.00 34.84 3.24
1565 1571 2.568623 AAAGATGGGGTGTCACACTC 57.431 50.000 8.12 2.71 34.40 3.51
1566 1572 3.248024 TCTAAAGATGGGGTGTCACACT 58.752 45.455 8.12 0.00 34.40 3.55
1567 1573 3.695830 TCTAAAGATGGGGTGTCACAC 57.304 47.619 0.00 0.00 0.00 3.82
1568 1574 4.220693 CATCTAAAGATGGGGTGTCACA 57.779 45.455 11.44 0.00 46.09 3.58
1594 1600 7.035612 GGTGTCGTAGCATATGATCATTCATA 58.964 38.462 14.65 0.00 46.25 2.15
1595 1601 5.871524 GGTGTCGTAGCATATGATCATTCAT 59.128 40.000 14.65 0.00 44.76 2.57
1596 1602 5.230182 GGTGTCGTAGCATATGATCATTCA 58.770 41.667 14.65 0.00 39.10 2.57
1597 1603 4.324669 CGGTGTCGTAGCATATGATCATTC 59.675 45.833 14.65 3.97 39.10 2.67
1598 1604 4.237724 CGGTGTCGTAGCATATGATCATT 58.762 43.478 14.65 0.00 39.10 2.57
1599 1605 3.367395 CCGGTGTCGTAGCATATGATCAT 60.367 47.826 13.81 13.81 39.10 2.45
1600 1606 2.030274 CCGGTGTCGTAGCATATGATCA 60.030 50.000 6.97 0.00 39.10 2.92
1601 1607 2.596452 CCGGTGTCGTAGCATATGATC 58.404 52.381 6.97 0.00 39.10 2.92
1602 1608 1.272490 CCCGGTGTCGTAGCATATGAT 59.728 52.381 6.97 1.82 39.10 2.45
1603 1609 0.671796 CCCGGTGTCGTAGCATATGA 59.328 55.000 6.97 0.00 33.38 2.15
1604 1610 0.387929 ACCCGGTGTCGTAGCATATG 59.612 55.000 0.00 0.00 33.95 1.78
1605 1611 0.672342 GACCCGGTGTCGTAGCATAT 59.328 55.000 0.00 0.00 33.49 1.78
1606 1612 2.109431 GACCCGGTGTCGTAGCATA 58.891 57.895 0.00 0.00 33.49 3.14
1607 1613 2.890371 GACCCGGTGTCGTAGCAT 59.110 61.111 0.00 0.00 33.49 3.79
1614 1620 2.028020 AGAGAGAAAATGACCCGGTGTC 60.028 50.000 14.17 14.17 44.72 3.67
1615 1621 1.978580 AGAGAGAAAATGACCCGGTGT 59.021 47.619 0.00 0.00 0.00 4.16
1616 1622 2.770164 AGAGAGAAAATGACCCGGTG 57.230 50.000 0.00 0.00 0.00 4.94
1617 1623 3.709587 TCTAGAGAGAAAATGACCCGGT 58.290 45.455 0.00 0.00 0.00 5.28
1618 1624 4.262249 GGATCTAGAGAGAAAATGACCCGG 60.262 50.000 0.00 0.00 34.61 5.73
1619 1625 4.342378 TGGATCTAGAGAGAAAATGACCCG 59.658 45.833 0.00 0.00 34.61 5.28
1620 1626 5.454045 GGTGGATCTAGAGAGAAAATGACCC 60.454 48.000 0.00 0.00 34.61 4.46
1621 1627 5.454045 GGGTGGATCTAGAGAGAAAATGACC 60.454 48.000 0.00 0.00 34.61 4.02
1622 1628 5.454045 GGGGTGGATCTAGAGAGAAAATGAC 60.454 48.000 0.00 0.00 34.61 3.06
1623 1629 4.656112 GGGGTGGATCTAGAGAGAAAATGA 59.344 45.833 0.00 0.00 34.61 2.57
1624 1630 4.657969 AGGGGTGGATCTAGAGAGAAAATG 59.342 45.833 0.00 0.00 34.61 2.32
1625 1631 4.901927 AGGGGTGGATCTAGAGAGAAAAT 58.098 43.478 0.00 0.00 34.61 1.82
1626 1632 4.354208 AGGGGTGGATCTAGAGAGAAAA 57.646 45.455 0.00 0.00 34.61 2.29
1627 1633 4.482772 AGTAGGGGTGGATCTAGAGAGAAA 59.517 45.833 0.00 0.00 34.61 2.52
1628 1634 4.055820 AGTAGGGGTGGATCTAGAGAGAA 58.944 47.826 0.00 0.00 34.61 2.87
1629 1635 3.653836 GAGTAGGGGTGGATCTAGAGAGA 59.346 52.174 0.00 0.00 35.71 3.10
1630 1636 3.245122 GGAGTAGGGGTGGATCTAGAGAG 60.245 56.522 0.00 0.00 0.00 3.20
1631 1637 2.717515 GGAGTAGGGGTGGATCTAGAGA 59.282 54.545 0.00 0.00 0.00 3.10
1632 1638 2.719705 AGGAGTAGGGGTGGATCTAGAG 59.280 54.545 0.00 0.00 0.00 2.43
1633 1639 2.447429 CAGGAGTAGGGGTGGATCTAGA 59.553 54.545 0.00 0.00 0.00 2.43
1634 1640 2.178106 ACAGGAGTAGGGGTGGATCTAG 59.822 54.545 0.00 0.00 0.00 2.43
1635 1641 2.177233 GACAGGAGTAGGGGTGGATCTA 59.823 54.545 0.00 0.00 0.00 1.98
1636 1642 1.019650 ACAGGAGTAGGGGTGGATCT 58.980 55.000 0.00 0.00 0.00 2.75
1637 1643 1.415200 GACAGGAGTAGGGGTGGATC 58.585 60.000 0.00 0.00 0.00 3.36
1638 1644 0.397254 CGACAGGAGTAGGGGTGGAT 60.397 60.000 0.00 0.00 0.00 3.41
1639 1645 1.000019 CGACAGGAGTAGGGGTGGA 60.000 63.158 0.00 0.00 0.00 4.02
1640 1646 2.722201 GCGACAGGAGTAGGGGTGG 61.722 68.421 0.00 0.00 0.00 4.61
1641 1647 2.722201 GGCGACAGGAGTAGGGGTG 61.722 68.421 0.00 0.00 0.00 4.61
1642 1648 2.363925 GGCGACAGGAGTAGGGGT 60.364 66.667 0.00 0.00 0.00 4.95
1643 1649 1.686110 AAGGCGACAGGAGTAGGGG 60.686 63.158 0.00 0.00 0.00 4.79
1644 1650 1.258445 ACAAGGCGACAGGAGTAGGG 61.258 60.000 0.00 0.00 0.00 3.53
1645 1651 1.405821 CTACAAGGCGACAGGAGTAGG 59.594 57.143 0.00 0.00 0.00 3.18
1646 1652 1.405821 CCTACAAGGCGACAGGAGTAG 59.594 57.143 0.00 0.00 0.00 2.57
1647 1653 1.272313 ACCTACAAGGCGACAGGAGTA 60.272 52.381 0.00 0.00 39.63 2.59
1648 1654 0.542232 ACCTACAAGGCGACAGGAGT 60.542 55.000 0.00 0.00 39.63 3.85
1649 1655 0.173708 GACCTACAAGGCGACAGGAG 59.826 60.000 0.00 0.00 39.63 3.69
1650 1656 0.541063 TGACCTACAAGGCGACAGGA 60.541 55.000 0.00 0.00 39.63 3.86
1651 1657 0.389948 GTGACCTACAAGGCGACAGG 60.390 60.000 0.00 0.00 39.63 4.00
1652 1658 0.603569 AGTGACCTACAAGGCGACAG 59.396 55.000 0.00 0.00 39.63 3.51
1653 1659 0.601558 GAGTGACCTACAAGGCGACA 59.398 55.000 0.00 0.00 39.63 4.35
1654 1660 0.601558 TGAGTGACCTACAAGGCGAC 59.398 55.000 0.00 0.00 39.63 5.19
1655 1661 0.601558 GTGAGTGACCTACAAGGCGA 59.398 55.000 0.00 0.00 39.63 5.54
1666 1672 5.255710 ACTACATCAGCATAGTGAGTGAC 57.744 43.478 0.00 0.00 30.34 3.67
1716 1722 3.078843 GCCATTGCCCATCCCCTCT 62.079 63.158 0.00 0.00 0.00 3.69
1724 1730 2.891941 CTAAGCCGAGCCATTGCCCA 62.892 60.000 0.00 0.00 38.69 5.36
1726 1732 2.838974 GCTAAGCCGAGCCATTGCC 61.839 63.158 0.00 0.00 38.69 4.52
1757 1763 1.003718 CGGAGAACCACCAACTCCC 60.004 63.158 0.00 0.00 44.96 4.30
1759 1765 0.106149 ACACGGAGAACCACCAACTC 59.894 55.000 0.00 0.00 35.59 3.01
1774 1780 0.846401 CGAGATTACGCCATGACACG 59.154 55.000 0.00 0.00 0.00 4.49
1799 1805 5.241728 ACACTAGAAAAAGGAAAGGCATCAC 59.758 40.000 0.00 0.00 0.00 3.06
1808 1814 7.067615 TGCACACAAATACACTAGAAAAAGGAA 59.932 33.333 0.00 0.00 0.00 3.36
1811 1817 7.862372 ACATGCACACAAATACACTAGAAAAAG 59.138 33.333 0.00 0.00 0.00 2.27
1816 1822 5.546526 TCACATGCACACAAATACACTAGA 58.453 37.500 0.00 0.00 0.00 2.43
1817 1823 5.861222 TCACATGCACACAAATACACTAG 57.139 39.130 0.00 0.00 0.00 2.57
1818 1824 5.704978 ACATCACATGCACACAAATACACTA 59.295 36.000 0.00 0.00 0.00 2.74
1819 1825 4.520111 ACATCACATGCACACAAATACACT 59.480 37.500 0.00 0.00 0.00 3.55
1828 1838 5.801350 AACTACATACATCACATGCACAC 57.199 39.130 0.00 0.00 0.00 3.82
1839 1849 4.081309 ACCGGCACTACAAACTACATACAT 60.081 41.667 0.00 0.00 0.00 2.29
1840 1850 3.258872 ACCGGCACTACAAACTACATACA 59.741 43.478 0.00 0.00 0.00 2.29
1910 1920 2.015627 CAACGCACGGGCATGTTTG 61.016 57.895 11.77 2.90 41.24 2.93
1911 1921 2.334653 CAACGCACGGGCATGTTT 59.665 55.556 11.77 0.00 41.24 2.83
1912 1922 4.341502 GCAACGCACGGGCATGTT 62.342 61.111 11.77 3.22 41.24 2.71
1914 1924 4.340019 TTGCAACGCACGGGCATG 62.340 61.111 11.77 9.58 38.71 4.06
1915 1925 4.341502 GTTGCAACGCACGGGCAT 62.342 61.111 14.90 0.00 38.71 4.40
1927 1937 7.581213 ATGATATTATTTTTCTCCCGTTGCA 57.419 32.000 0.00 0.00 0.00 4.08
1928 1938 8.999431 TCTATGATATTATTTTTCTCCCGTTGC 58.001 33.333 0.00 0.00 0.00 4.17
1931 1941 9.930693 GTCTCTATGATATTATTTTTCTCCCGT 57.069 33.333 0.00 0.00 0.00 5.28
1932 1942 9.372369 GGTCTCTATGATATTATTTTTCTCCCG 57.628 37.037 0.00 0.00 0.00 5.14
1946 1956 7.831753 GCTTATTGCACTAGGTCTCTATGATA 58.168 38.462 0.00 0.00 42.31 2.15
1947 1957 6.696411 GCTTATTGCACTAGGTCTCTATGAT 58.304 40.000 0.00 0.00 42.31 2.45
1964 2156 5.766670 TGGGATTCTTGAGCTATGCTTATTG 59.233 40.000 0.00 0.00 39.88 1.90
1965 2157 5.945310 TGGGATTCTTGAGCTATGCTTATT 58.055 37.500 0.00 0.00 39.88 1.40
1969 2161 3.939740 TTGGGATTCTTGAGCTATGCT 57.060 42.857 0.00 0.00 43.88 3.79
1974 2166 3.686691 GCACCTATTGGGATTCTTGAGCT 60.687 47.826 0.00 0.00 38.76 4.09
1975 2167 2.620585 GCACCTATTGGGATTCTTGAGC 59.379 50.000 0.00 0.00 38.76 4.26
1977 2169 4.209538 CATGCACCTATTGGGATTCTTGA 58.790 43.478 0.00 0.00 38.76 3.02
1978 2170 3.956199 ACATGCACCTATTGGGATTCTTG 59.044 43.478 0.00 0.00 38.76 3.02
1979 2171 4.210331 GACATGCACCTATTGGGATTCTT 58.790 43.478 0.00 0.00 38.76 2.52
1980 2172 3.745480 CGACATGCACCTATTGGGATTCT 60.745 47.826 0.00 0.00 38.76 2.40
1982 2174 2.092429 ACGACATGCACCTATTGGGATT 60.092 45.455 0.00 0.00 38.76 3.01
1983 2175 1.490490 ACGACATGCACCTATTGGGAT 59.510 47.619 0.00 0.00 38.76 3.85
1984 2176 0.908910 ACGACATGCACCTATTGGGA 59.091 50.000 0.00 0.00 38.76 4.37
1985 2177 1.016627 CACGACATGCACCTATTGGG 58.983 55.000 0.00 0.00 41.89 4.12
1997 2189 5.048782 ACACTATGTTTCAAATGCACGACAT 60.049 36.000 0.00 0.00 42.30 3.06
1998 2190 4.274705 ACACTATGTTTCAAATGCACGACA 59.725 37.500 0.00 0.00 0.00 4.35
2001 2193 4.158384 GGACACTATGTTTCAAATGCACG 58.842 43.478 0.00 0.00 0.00 5.34
2002 2194 4.022416 TGGGACACTATGTTTCAAATGCAC 60.022 41.667 0.00 0.00 0.00 4.57
2004 2196 4.782019 TGGGACACTATGTTTCAAATGC 57.218 40.909 0.00 0.00 0.00 3.56
2021 2213 4.618227 CGATAAGCGATGATACATGTGGGA 60.618 45.833 9.11 0.00 44.57 4.37
2022 2214 3.614176 CGATAAGCGATGATACATGTGGG 59.386 47.826 9.11 0.00 44.57 4.61
2024 2216 4.324669 GGACGATAAGCGATGATACATGTG 59.675 45.833 9.11 0.00 44.57 3.21
2025 2217 4.218635 AGGACGATAAGCGATGATACATGT 59.781 41.667 2.69 2.69 44.57 3.21
2027 2219 5.392767 AAGGACGATAAGCGATGATACAT 57.607 39.130 0.00 0.00 44.57 2.29
2028 2220 4.321008 GGAAGGACGATAAGCGATGATACA 60.321 45.833 0.00 0.00 44.57 2.29
2029 2221 4.167268 GGAAGGACGATAAGCGATGATAC 58.833 47.826 0.00 0.00 44.57 2.24
2030 2222 3.192844 GGGAAGGACGATAAGCGATGATA 59.807 47.826 0.00 0.00 44.57 2.15
2031 2223 2.028930 GGGAAGGACGATAAGCGATGAT 60.029 50.000 0.00 0.00 44.57 2.45
2032 2224 1.340248 GGGAAGGACGATAAGCGATGA 59.660 52.381 0.00 0.00 44.57 2.92
2034 2226 0.314302 CGGGAAGGACGATAAGCGAT 59.686 55.000 0.00 0.00 44.57 4.58
2035 2227 1.033746 ACGGGAAGGACGATAAGCGA 61.034 55.000 0.00 0.00 44.57 4.93
2038 2230 0.388294 GGGACGGGAAGGACGATAAG 59.612 60.000 0.00 0.00 34.93 1.73
2039 2231 2.508361 GGGACGGGAAGGACGATAA 58.492 57.895 0.00 0.00 34.93 1.75
2040 2232 4.265206 GGGACGGGAAGGACGATA 57.735 61.111 0.00 0.00 34.93 2.92
2058 2250 4.295119 ACCACGACCACTGTCCGC 62.295 66.667 0.00 0.00 38.32 5.54
2059 2251 1.798234 TACACCACGACCACTGTCCG 61.798 60.000 0.00 0.00 38.32 4.79
2060 2252 0.319297 GTACACCACGACCACTGTCC 60.319 60.000 0.00 0.00 38.32 4.02
2061 2253 3.190337 GTACACCACGACCACTGTC 57.810 57.895 0.00 0.00 38.18 3.51
2071 2263 3.119029 TGTTCCTATTAGGCGTACACCAC 60.119 47.826 4.73 0.00 34.61 4.16
2072 2264 3.098377 TGTTCCTATTAGGCGTACACCA 58.902 45.455 4.73 0.00 34.61 4.17
2073 2265 3.451526 GTGTTCCTATTAGGCGTACACC 58.548 50.000 20.52 0.00 36.64 4.16
2074 2266 3.451526 GGTGTTCCTATTAGGCGTACAC 58.548 50.000 21.80 21.80 39.23 2.90
2075 2267 2.099592 CGGTGTTCCTATTAGGCGTACA 59.900 50.000 4.73 6.49 34.61 2.90
2076 2268 2.099756 ACGGTGTTCCTATTAGGCGTAC 59.900 50.000 4.73 4.14 34.61 3.67
2077 2269 2.099592 CACGGTGTTCCTATTAGGCGTA 59.900 50.000 10.66 0.00 34.61 4.42
2078 2270 1.134907 CACGGTGTTCCTATTAGGCGT 60.135 52.381 4.73 5.78 34.61 5.68
2079 2271 1.135527 TCACGGTGTTCCTATTAGGCG 59.864 52.381 8.17 5.16 34.61 5.52
2080 2272 2.934553 GTTCACGGTGTTCCTATTAGGC 59.065 50.000 8.17 0.00 34.61 3.93
2081 2273 4.196626 TGTTCACGGTGTTCCTATTAGG 57.803 45.455 8.17 3.07 36.46 2.69
2082 2274 6.423905 CCATATGTTCACGGTGTTCCTATTAG 59.576 42.308 8.17 0.00 0.00 1.73
2083 2275 6.126997 ACCATATGTTCACGGTGTTCCTATTA 60.127 38.462 8.17 0.00 0.00 0.98
2084 2276 5.123227 CCATATGTTCACGGTGTTCCTATT 58.877 41.667 8.17 0.00 0.00 1.73
2085 2277 4.163458 ACCATATGTTCACGGTGTTCCTAT 59.837 41.667 8.17 3.42 0.00 2.57
2086 2278 3.516300 ACCATATGTTCACGGTGTTCCTA 59.484 43.478 8.17 1.35 0.00 2.94
2087 2279 2.304761 ACCATATGTTCACGGTGTTCCT 59.695 45.455 8.17 0.00 0.00 3.36
2088 2280 2.706890 ACCATATGTTCACGGTGTTCC 58.293 47.619 8.17 0.00 0.00 3.62
2089 2281 5.866335 TTAACCATATGTTCACGGTGTTC 57.134 39.130 8.17 3.49 38.42 3.18
2090 2282 6.177610 AGATTAACCATATGTTCACGGTGTT 58.822 36.000 8.17 0.00 38.42 3.32
2091 2283 5.741011 AGATTAACCATATGTTCACGGTGT 58.259 37.500 8.17 0.00 38.42 4.16
2092 2284 6.677781 AAGATTAACCATATGTTCACGGTG 57.322 37.500 0.56 0.56 38.42 4.94
2093 2285 8.262227 TCTTAAGATTAACCATATGTTCACGGT 58.738 33.333 0.00 0.00 38.42 4.83
2094 2286 8.657074 TCTTAAGATTAACCATATGTTCACGG 57.343 34.615 0.00 0.00 38.42 4.94
2104 2296 9.265901 CGAACTCATCATCTTAAGATTAACCAT 57.734 33.333 15.49 0.21 31.21 3.55
2105 2297 7.710907 CCGAACTCATCATCTTAAGATTAACCA 59.289 37.037 15.49 0.00 31.21 3.67
2106 2298 7.307455 GCCGAACTCATCATCTTAAGATTAACC 60.307 40.741 15.49 0.11 31.21 2.85
2107 2299 7.307455 GGCCGAACTCATCATCTTAAGATTAAC 60.307 40.741 15.49 1.80 31.21 2.01
2108 2300 6.706270 GGCCGAACTCATCATCTTAAGATTAA 59.294 38.462 15.49 7.43 31.21 1.40
2109 2301 6.183360 TGGCCGAACTCATCATCTTAAGATTA 60.183 38.462 15.49 8.53 31.21 1.75
2110 2302 5.059833 GGCCGAACTCATCATCTTAAGATT 58.940 41.667 15.49 0.00 31.21 2.40
2111 2303 4.101585 TGGCCGAACTCATCATCTTAAGAT 59.898 41.667 12.37 12.37 34.56 2.40
2112 2304 3.450817 TGGCCGAACTCATCATCTTAAGA 59.549 43.478 7.82 7.82 0.00 2.10
2113 2305 3.797039 TGGCCGAACTCATCATCTTAAG 58.203 45.455 0.00 0.00 0.00 1.85
2114 2306 3.904800 TGGCCGAACTCATCATCTTAA 57.095 42.857 0.00 0.00 0.00 1.85
2115 2307 3.552890 CGATGGCCGAACTCATCATCTTA 60.553 47.826 0.00 0.00 39.60 2.10
2116 2308 2.804572 CGATGGCCGAACTCATCATCTT 60.805 50.000 0.00 0.00 39.60 2.40
2117 2309 1.269988 CGATGGCCGAACTCATCATCT 60.270 52.381 0.00 0.00 39.60 2.90
2118 2310 1.143305 CGATGGCCGAACTCATCATC 58.857 55.000 0.00 0.00 39.60 2.92
2119 2311 0.882042 GCGATGGCCGAACTCATCAT 60.882 55.000 0.00 0.00 39.60 2.45
2120 2312 1.521457 GCGATGGCCGAACTCATCA 60.521 57.895 0.00 0.00 39.60 3.07
2121 2313 0.882042 ATGCGATGGCCGAACTCATC 60.882 55.000 0.00 0.00 41.76 2.92
2122 2314 1.146930 ATGCGATGGCCGAACTCAT 59.853 52.632 0.00 0.00 41.76 2.90
2123 2315 1.815003 CATGCGATGGCCGAACTCA 60.815 57.895 0.00 0.00 41.76 3.41
2124 2316 1.521457 TCATGCGATGGCCGAACTC 60.521 57.895 0.00 0.00 41.76 3.01
2125 2317 1.815421 GTCATGCGATGGCCGAACT 60.815 57.895 0.00 0.00 41.76 3.01
2126 2318 1.766143 GAGTCATGCGATGGCCGAAC 61.766 60.000 0.00 0.00 41.76 3.95
2127 2319 1.521457 GAGTCATGCGATGGCCGAA 60.521 57.895 0.00 0.00 41.76 4.30
2128 2320 2.106938 GAGTCATGCGATGGCCGA 59.893 61.111 0.00 0.00 41.76 5.54
2129 2321 2.202919 TGAGTCATGCGATGGCCG 60.203 61.111 0.00 0.00 38.85 6.13
2130 2322 0.104855 TAGTGAGTCATGCGATGGCC 59.895 55.000 0.00 0.00 38.85 5.36
2131 2323 1.495878 CTAGTGAGTCATGCGATGGC 58.504 55.000 0.00 0.00 40.52 4.40
2132 2324 1.202452 TGCTAGTGAGTCATGCGATGG 60.202 52.381 0.00 0.00 0.00 3.51
2133 2325 2.214387 TGCTAGTGAGTCATGCGATG 57.786 50.000 0.00 0.00 0.00 3.84
2134 2326 3.181472 TGAATGCTAGTGAGTCATGCGAT 60.181 43.478 0.00 0.00 0.00 4.58
2135 2327 2.166254 TGAATGCTAGTGAGTCATGCGA 59.834 45.455 0.00 0.00 0.00 5.10
2136 2328 2.543641 TGAATGCTAGTGAGTCATGCG 58.456 47.619 0.00 0.00 0.00 4.73
2137 2329 3.937706 AGTTGAATGCTAGTGAGTCATGC 59.062 43.478 0.00 2.44 0.00 4.06
2138 2330 4.201792 GCAGTTGAATGCTAGTGAGTCATG 60.202 45.833 0.00 0.00 43.07 3.07
2139 2331 3.937706 GCAGTTGAATGCTAGTGAGTCAT 59.062 43.478 0.00 0.00 43.07 3.06
2140 2332 3.329386 GCAGTTGAATGCTAGTGAGTCA 58.671 45.455 0.00 0.00 43.07 3.41
2141 2333 2.346847 CGCAGTTGAATGCTAGTGAGTC 59.653 50.000 1.84 0.00 44.24 3.36
2142 2334 2.341257 CGCAGTTGAATGCTAGTGAGT 58.659 47.619 1.84 0.00 44.24 3.41
2143 2335 1.061711 GCGCAGTTGAATGCTAGTGAG 59.938 52.381 0.30 0.00 44.24 3.51
2144 2336 1.078709 GCGCAGTTGAATGCTAGTGA 58.921 50.000 0.30 0.00 44.24 3.41
2145 2337 1.081892 AGCGCAGTTGAATGCTAGTG 58.918 50.000 11.47 0.00 44.24 2.74
2146 2338 2.672961 TAGCGCAGTTGAATGCTAGT 57.327 45.000 11.47 0.00 44.24 2.57
2148 2340 2.094234 TCACTAGCGCAGTTGAATGCTA 60.094 45.455 11.47 0.00 44.24 3.49
2149 2341 1.081892 CACTAGCGCAGTTGAATGCT 58.918 50.000 11.47 0.00 44.24 3.79
2150 2342 1.078709 TCACTAGCGCAGTTGAATGC 58.921 50.000 11.47 0.00 42.95 3.56
2151 2343 3.811722 TTTCACTAGCGCAGTTGAATG 57.188 42.857 11.47 0.00 34.26 2.67
2152 2344 4.829064 TTTTTCACTAGCGCAGTTGAAT 57.171 36.364 11.47 0.00 34.26 2.57
2201 2393 7.308649 GGCACTTACGTCTATATCTCAATGAGA 60.309 40.741 15.97 15.97 43.20 3.27
2202 2394 6.804295 GGCACTTACGTCTATATCTCAATGAG 59.196 42.308 3.38 3.38 0.00 2.90
2203 2395 6.567891 CGGCACTTACGTCTATATCTCAATGA 60.568 42.308 0.00 0.00 0.00 2.57
2204 2396 5.569441 CGGCACTTACGTCTATATCTCAATG 59.431 44.000 0.00 0.00 0.00 2.82
2205 2397 5.241064 ACGGCACTTACGTCTATATCTCAAT 59.759 40.000 0.00 0.00 41.25 2.57
2206 2398 4.577693 ACGGCACTTACGTCTATATCTCAA 59.422 41.667 0.00 0.00 41.25 3.02
2207 2399 4.132336 ACGGCACTTACGTCTATATCTCA 58.868 43.478 0.00 0.00 41.25 3.27
2208 2400 4.745837 ACGGCACTTACGTCTATATCTC 57.254 45.455 0.00 0.00 41.25 2.75
2218 2410 3.688136 CGGATGACGGCACTTACG 58.312 61.111 0.00 0.00 39.42 3.18
2228 2420 0.386113 GGGAGTAGCTCACGGATGAC 59.614 60.000 0.00 0.00 31.08 3.06
2229 2421 0.259065 AGGGAGTAGCTCACGGATGA 59.741 55.000 0.00 0.00 39.19 2.92
2230 2422 0.671251 GAGGGAGTAGCTCACGGATG 59.329 60.000 0.00 0.00 39.19 3.51
2231 2423 0.468400 GGAGGGAGTAGCTCACGGAT 60.468 60.000 0.00 0.00 39.19 4.18
2232 2424 1.076923 GGAGGGAGTAGCTCACGGA 60.077 63.158 0.00 0.00 39.19 4.69
2233 2425 0.970937 TTGGAGGGAGTAGCTCACGG 60.971 60.000 0.00 0.00 39.19 4.94
2234 2426 0.895530 TTTGGAGGGAGTAGCTCACG 59.104 55.000 0.00 0.00 39.19 4.35
2235 2427 1.623811 TGTTTGGAGGGAGTAGCTCAC 59.376 52.381 0.00 0.00 33.42 3.51
2236 2428 1.902508 CTGTTTGGAGGGAGTAGCTCA 59.097 52.381 0.00 0.00 31.08 4.26
2237 2429 1.903183 ACTGTTTGGAGGGAGTAGCTC 59.097 52.381 0.00 0.00 0.00 4.09
2238 2430 1.625818 CACTGTTTGGAGGGAGTAGCT 59.374 52.381 0.00 0.00 0.00 3.32
2239 2431 1.623811 TCACTGTTTGGAGGGAGTAGC 59.376 52.381 0.00 0.00 0.00 3.58
2240 2432 4.319177 CTTTCACTGTTTGGAGGGAGTAG 58.681 47.826 0.00 0.00 0.00 2.57
2241 2433 3.072476 CCTTTCACTGTTTGGAGGGAGTA 59.928 47.826 0.00 0.00 0.00 2.59
2242 2434 2.158608 CCTTTCACTGTTTGGAGGGAGT 60.159 50.000 0.00 0.00 0.00 3.85
2243 2435 2.106511 TCCTTTCACTGTTTGGAGGGAG 59.893 50.000 0.00 0.00 32.60 4.30
2244 2436 2.106511 CTCCTTTCACTGTTTGGAGGGA 59.893 50.000 0.00 0.00 40.25 4.20
2245 2437 2.106511 TCTCCTTTCACTGTTTGGAGGG 59.893 50.000 0.00 0.00 43.14 4.30
2246 2438 3.406764 CTCTCCTTTCACTGTTTGGAGG 58.593 50.000 0.00 3.69 43.14 4.30
2247 2439 3.071602 TCCTCTCCTTTCACTGTTTGGAG 59.928 47.826 0.00 0.00 44.00 3.86
2248 2440 3.045634 TCCTCTCCTTTCACTGTTTGGA 58.954 45.455 0.00 0.00 0.00 3.53
2249 2441 3.492102 TCCTCTCCTTTCACTGTTTGG 57.508 47.619 0.00 0.00 0.00 3.28
2250 2442 3.817647 CCTTCCTCTCCTTTCACTGTTTG 59.182 47.826 0.00 0.00 0.00 2.93
2251 2443 3.716872 TCCTTCCTCTCCTTTCACTGTTT 59.283 43.478 0.00 0.00 0.00 2.83
2252 2444 3.318313 TCCTTCCTCTCCTTTCACTGTT 58.682 45.455 0.00 0.00 0.00 3.16
2253 2445 2.977808 TCCTTCCTCTCCTTTCACTGT 58.022 47.619 0.00 0.00 0.00 3.55
2254 2446 4.357918 TTTCCTTCCTCTCCTTTCACTG 57.642 45.455 0.00 0.00 0.00 3.66
2255 2447 4.166144 TGTTTTCCTTCCTCTCCTTTCACT 59.834 41.667 0.00 0.00 0.00 3.41
2256 2448 4.461198 TGTTTTCCTTCCTCTCCTTTCAC 58.539 43.478 0.00 0.00 0.00 3.18
2257 2449 4.788925 TGTTTTCCTTCCTCTCCTTTCA 57.211 40.909 0.00 0.00 0.00 2.69
2258 2450 6.656632 ATTTGTTTTCCTTCCTCTCCTTTC 57.343 37.500 0.00 0.00 0.00 2.62
2259 2451 7.092891 ACAAATTTGTTTTCCTTCCTCTCCTTT 60.093 33.333 18.13 0.00 38.47 3.11
2260 2452 6.384015 ACAAATTTGTTTTCCTTCCTCTCCTT 59.616 34.615 18.13 0.00 38.47 3.36
2261 2453 5.899547 ACAAATTTGTTTTCCTTCCTCTCCT 59.100 36.000 18.13 0.00 38.47 3.69
2262 2454 6.161855 ACAAATTTGTTTTCCTTCCTCTCC 57.838 37.500 18.13 0.00 38.47 3.71
2280 2472 8.416329 GCCAATGAGTAATAGGATGAAACAAAT 58.584 33.333 0.00 0.00 0.00 2.32
2281 2473 7.615365 AGCCAATGAGTAATAGGATGAAACAAA 59.385 33.333 0.00 0.00 0.00 2.83
2282 2474 7.118723 AGCCAATGAGTAATAGGATGAAACAA 58.881 34.615 0.00 0.00 0.00 2.83
2283 2475 6.662755 AGCCAATGAGTAATAGGATGAAACA 58.337 36.000 0.00 0.00 0.00 2.83
2284 2476 7.095017 GCTAGCCAATGAGTAATAGGATGAAAC 60.095 40.741 2.29 0.00 0.00 2.78
2285 2477 6.936900 GCTAGCCAATGAGTAATAGGATGAAA 59.063 38.462 2.29 0.00 0.00 2.69
2286 2478 6.467677 GCTAGCCAATGAGTAATAGGATGAA 58.532 40.000 2.29 0.00 0.00 2.57
2287 2479 5.046304 GGCTAGCCAATGAGTAATAGGATGA 60.046 44.000 29.33 0.00 35.81 2.92
2288 2480 5.181748 GGCTAGCCAATGAGTAATAGGATG 58.818 45.833 29.33 0.00 35.81 3.51
2289 2481 5.428184 GGCTAGCCAATGAGTAATAGGAT 57.572 43.478 29.33 0.00 35.81 3.24
2290 2482 4.891992 GGCTAGCCAATGAGTAATAGGA 57.108 45.455 29.33 0.00 35.81 2.94


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.