Multiple sequence alignment - TraesCS3B01G544000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G544000 chr3B 100.000 2783 0 0 1 2783 781472051 781469269 0.000000e+00 5140.0
1 TraesCS3B01G544000 chr3B 76.562 768 129 28 1019 1782 781494719 781493999 9.410000e-100 374.0
2 TraesCS3B01G544000 chr3B 75.769 780 149 29 1016 1782 781356310 781357062 9.480000e-95 357.0
3 TraesCS3B01G544000 chr3B 86.413 184 23 2 2106 2288 593763470 593763288 1.690000e-47 200.0
4 TraesCS3B01G544000 chr3D 86.681 1892 146 53 2 1859 584594482 584592663 0.000000e+00 2001.0
5 TraesCS3B01G544000 chr3D 91.591 1427 79 20 458 1859 584353111 584351701 0.000000e+00 1932.0
6 TraesCS3B01G544000 chr3D 87.625 1099 88 28 765 1859 584344493 584343439 0.000000e+00 1232.0
7 TraesCS3B01G544000 chr3D 83.972 861 82 31 2 841 584442031 584441206 0.000000e+00 774.0
8 TraesCS3B01G544000 chr3D 87.764 662 47 25 852 1494 584423411 584422765 0.000000e+00 743.0
9 TraesCS3B01G544000 chr3D 92.833 293 20 1 1567 1859 584422467 584422176 9.210000e-115 424.0
10 TraesCS3B01G544000 chr3D 77.290 775 129 31 1016 1782 584048851 584049586 1.990000e-111 412.0
11 TraesCS3B01G544000 chr3D 76.026 780 143 35 1019 1782 584456790 584456039 5.660000e-97 364.0
12 TraesCS3B01G544000 chr3D 88.411 302 24 7 466 759 584349911 584349613 1.230000e-93 353.0
13 TraesCS3B01G544000 chr3D 74.903 777 155 30 1016 1782 584129950 584130696 4.470000e-83 318.0
14 TraesCS3B01G544000 chr3D 84.965 286 35 4 2503 2783 584342032 584341750 1.630000e-72 283.0
15 TraesCS3B01G544000 chr3D 85.271 258 19 5 403 655 584345648 584345405 5.950000e-62 248.0
16 TraesCS3B01G544000 chr3D 87.783 221 11 7 1845 2065 584351654 584351450 7.700000e-61 244.0
17 TraesCS3B01G544000 chr3D 89.560 182 16 3 1915 2095 584422014 584421835 7.750000e-56 228.0
18 TraesCS3B01G544000 chr3D 80.731 301 42 4 2484 2783 584351380 584351095 1.300000e-53 220.0
19 TraesCS3B01G544000 chr3D 92.715 151 9 1 1915 2065 584343344 584343196 1.680000e-52 217.0
20 TraesCS3B01G544000 chr3D 81.579 266 31 10 51 314 584345925 584345676 1.310000e-48 204.0
21 TraesCS3B01G544000 chr3D 96.364 55 2 0 2055 2109 584343175 584343121 1.060000e-14 91.6
22 TraesCS3B01G544000 chr3D 80.645 124 18 3 1020 1143 584597555 584597438 1.060000e-14 91.6
23 TraesCS3B01G544000 chr3D 88.710 62 7 0 2048 2109 584351437 584351376 2.970000e-10 76.8
24 TraesCS3B01G544000 chrUn 76.299 789 140 35 1019 1782 45483157 45482391 7.280000e-101 377.0
25 TraesCS3B01G544000 chrUn 74.449 227 36 12 2287 2496 297825549 297825328 8.260000e-11 78.7
26 TraesCS3B01G544000 chr6B 94.089 203 12 0 2286 2488 10109199 10108997 2.690000e-80 309.0
27 TraesCS3B01G544000 chr6B 82.439 205 34 2 2106 2309 359299368 359299165 7.920000e-41 178.0
28 TraesCS3B01G544000 chr6B 84.667 150 17 5 1377 1525 691976544 691976688 8.030000e-31 145.0
29 TraesCS3B01G544000 chr6B 84.564 149 19 3 1377 1525 692044360 692044216 8.030000e-31 145.0
30 TraesCS3B01G544000 chr2B 96.721 183 6 0 2286 2468 642953325 642953507 3.480000e-79 305.0
31 TraesCS3B01G544000 chr2B 95.082 183 9 0 2286 2468 517922018 517921836 3.510000e-74 289.0
32 TraesCS3B01G544000 chr2B 84.390 205 30 2 2106 2309 62588864 62589067 1.690000e-47 200.0
33 TraesCS3B01G544000 chr1B 96.133 181 7 0 2286 2466 660674511 660674691 2.100000e-76 296.0
34 TraesCS3B01G544000 chr1B 97.521 121 3 0 2168 2288 137651559 137651679 1.010000e-49 207.0
35 TraesCS3B01G544000 chr1B 84.390 205 30 2 2106 2309 498361853 498361650 1.690000e-47 200.0
36 TraesCS3B01G544000 chr1B 77.130 223 24 14 2286 2494 2112698 2112907 1.360000e-18 104.0
37 TraesCS3B01G544000 chr1B 81.739 115 19 2 2286 2399 2089922 2090035 8.210000e-16 95.3
38 TraesCS3B01G544000 chr1B 79.412 102 19 2 2333 2433 570480114 570480014 1.380000e-08 71.3
39 TraesCS3B01G544000 chr7B 95.580 181 8 0 2286 2466 435788319 435788499 9.750000e-75 291.0
40 TraesCS3B01G544000 chr7B 95.082 183 9 0 2286 2468 182715403 182715585 3.510000e-74 289.0
41 TraesCS3B01G544000 chr7B 84.865 185 24 2 2106 2288 131431523 131431341 1.700000e-42 183.0
42 TraesCS3B01G544000 chr5B 95.082 183 9 0 2286 2468 616159733 616159915 3.510000e-74 289.0
43 TraesCS3B01G544000 chr3A 95.082 183 9 0 2286 2468 374342194 374342376 3.510000e-74 289.0
44 TraesCS3B01G544000 chr3A 75.871 373 68 13 2105 2468 12859380 12859021 1.330000e-38 171.0
45 TraesCS3B01G544000 chr2D 92.857 196 12 1 2271 2466 544579455 544579648 1.630000e-72 283.0
46 TraesCS3B01G544000 chr2D 88.889 216 12 2 2286 2489 28942551 28942336 3.560000e-64 255.0
47 TraesCS3B01G544000 chr2D 79.018 224 32 9 2287 2497 478982060 478981839 3.740000e-29 139.0
48 TraesCS3B01G544000 chr2D 81.761 159 27 2 2286 2443 212071182 212071339 6.250000e-27 132.0
49 TraesCS3B01G544000 chr2D 79.208 101 13 7 2344 2441 595151529 595151624 2.310000e-06 63.9
50 TraesCS3B01G544000 chr6D 88.525 183 10 5 2286 2468 6389842 6389671 7.810000e-51 211.0
51 TraesCS3B01G544000 chr6D 81.481 216 24 7 2286 2487 133811569 133811356 2.220000e-36 163.0
52 TraesCS3B01G544000 chr6D 79.070 215 31 8 2286 2487 452223519 452223306 4.830000e-28 135.0
53 TraesCS3B01G544000 chr6D 96.296 81 3 0 2106 2186 25850398 25850478 1.740000e-27 134.0
54 TraesCS3B01G544000 chr6D 78.125 224 34 9 2287 2497 136888501 136888280 8.090000e-26 128.0
55 TraesCS3B01G544000 chr6D 82.550 149 23 2 1377 1525 454962398 454962253 8.090000e-26 128.0
56 TraesCS3B01G544000 chr6D 81.879 149 24 2 1377 1525 454967665 454967520 3.760000e-24 122.0
57 TraesCS3B01G544000 chr6D 76.037 217 32 13 2286 2489 140095122 140095331 8.210000e-16 95.3
58 TraesCS3B01G544000 chr6D 100.000 31 0 0 2459 2489 429712136 429712166 1.080000e-04 58.4
59 TraesCS3B01G544000 chr6D 91.892 37 3 0 2458 2494 433621001 433620965 5.000000e-03 52.8
60 TraesCS3B01G544000 chr4B 84.091 220 32 3 2106 2324 360788568 360788351 2.810000e-50 209.0
61 TraesCS3B01G544000 chr2A 93.939 132 6 2 2165 2296 546942241 546942112 6.080000e-47 198.0
62 TraesCS3B01G544000 chr2A 93.939 132 6 2 2165 2296 547133342 547133213 6.080000e-47 198.0
63 TraesCS3B01G544000 chr2A 85.870 92 10 3 2084 2173 293820880 293820790 8.210000e-16 95.3
64 TraesCS3B01G544000 chr5D 95.238 105 5 0 2302 2406 432993708 432993604 1.710000e-37 167.0
65 TraesCS3B01G544000 chr5D 77.982 218 34 6 2284 2488 280642146 280641930 1.050000e-24 124.0
66 TraesCS3B01G544000 chr5D 77.880 217 36 4 2286 2490 302565985 302565769 1.050000e-24 124.0
67 TraesCS3B01G544000 chr7D 80.717 223 28 7 2286 2495 296363108 296362888 2.870000e-35 159.0
68 TraesCS3B01G544000 chr1D 80.269 223 28 8 2286 2495 280171841 280172060 1.330000e-33 154.0
69 TraesCS3B01G544000 chr1D 80.000 215 29 8 2286 2487 329077585 329077798 2.230000e-31 147.0
70 TraesCS3B01G544000 chr1D 77.209 215 35 5 2286 2487 63640710 63640923 2.270000e-21 113.0
71 TraesCS3B01G544000 chr1D 81.579 114 19 2 2286 2398 194200569 194200681 2.950000e-15 93.5
72 TraesCS3B01G544000 chr1D 100.000 29 0 0 2459 2487 260957425 260957397 1.000000e-03 54.7
73 TraesCS3B01G544000 chr1D 100.000 29 0 0 2459 2487 367820640 367820612 1.000000e-03 54.7
74 TraesCS3B01G544000 chr6A 82.143 168 27 2 1358 1525 601256673 601256509 1.040000e-29 141.0
75 TraesCS3B01G544000 chr6A 95.122 82 4 0 2105 2186 50359807 50359726 2.250000e-26 130.0
76 TraesCS3B01G544000 chr6A 89.773 88 6 2 2087 2173 600825706 600825621 2.930000e-20 110.0
77 TraesCS3B01G544000 chr6A 74.449 227 36 12 2287 2496 614693730 614693509 8.260000e-11 78.7
78 TraesCS3B01G544000 chr6A 92.683 41 3 0 2458 2498 115544908 115544948 2.990000e-05 60.2
79 TraesCS3B01G544000 chr4D 77.315 216 32 10 2286 2488 175797899 175797688 8.150000e-21 111.0
80 TraesCS3B01G544000 chr4D 85.870 92 10 3 2085 2175 268067677 268067588 8.210000e-16 95.3
81 TraesCS3B01G544000 chr4D 94.737 38 0 2 2458 2495 294697162 294697197 1.080000e-04 58.4
82 TraesCS3B01G544000 chr1A 83.478 115 17 2 2286 2399 543059158 543059045 3.790000e-19 106.0
83 TraesCS3B01G544000 chr1A 76.852 216 25 11 2286 2488 542694784 542694581 6.340000e-17 99.0
84 TraesCS3B01G544000 chr7A 84.444 90 13 1 2085 2173 231100624 231100535 1.370000e-13 87.9
85 TraesCS3B01G544000 chr7A 79.808 104 19 2 2333 2435 628986845 628986947 1.070000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G544000 chr3B 781469269 781472051 2782 True 5140.000000 5140 100.000000 1 2783 1 chr3B.!!$R2 2782
1 TraesCS3B01G544000 chr3B 781493999 781494719 720 True 374.000000 374 76.562000 1019 1782 1 chr3B.!!$R3 763
2 TraesCS3B01G544000 chr3B 781356310 781357062 752 False 357.000000 357 75.769000 1016 1782 1 chr3B.!!$F1 766
3 TraesCS3B01G544000 chr3D 584592663 584597555 4892 True 1046.300000 2001 83.663000 2 1859 2 chr3D.!!$R5 1857
4 TraesCS3B01G544000 chr3D 584441206 584442031 825 True 774.000000 774 83.972000 2 841 1 chr3D.!!$R1 839
5 TraesCS3B01G544000 chr3D 584421835 584423411 1576 True 465.000000 743 90.052333 852 2095 3 chr3D.!!$R4 1243
6 TraesCS3B01G544000 chr3D 584341750 584353111 11361 True 463.763636 1932 87.795000 51 2783 11 chr3D.!!$R3 2732
7 TraesCS3B01G544000 chr3D 584048851 584049586 735 False 412.000000 412 77.290000 1016 1782 1 chr3D.!!$F1 766
8 TraesCS3B01G544000 chr3D 584456039 584456790 751 True 364.000000 364 76.026000 1019 1782 1 chr3D.!!$R2 763
9 TraesCS3B01G544000 chr3D 584129950 584130696 746 False 318.000000 318 74.903000 1016 1782 1 chr3D.!!$F2 766
10 TraesCS3B01G544000 chrUn 45482391 45483157 766 True 377.000000 377 76.299000 1019 1782 1 chrUn.!!$R1 763

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
978 9001 0.036875 CCAAGGACAGAGGGACCAAC 59.963 60.0 0.0 0.0 0.0 3.77 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2170 10613 0.032813 ATTTCCGGACGGAGGGAGTA 60.033 55.0 13.64 0.0 46.06 2.59 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 3097 0.110486 AACTTGTCCATTGACGGGCT 59.890 50.000 0.00 0.00 44.86 5.19
28 3102 3.443045 CCATTGACGGGCTGCCAC 61.443 66.667 22.05 11.56 0.00 5.01
41 3115 1.368641 CTGCCACGAAAATCCGATGA 58.631 50.000 0.00 0.00 0.00 2.92
72 7208 3.375782 GCATTAATGGCCAGGTGATTC 57.624 47.619 13.05 0.00 0.00 2.52
93 7229 3.364441 GCCTGTGGTGCATCGCAA 61.364 61.111 15.21 0.00 41.47 4.85
122 7259 2.028130 ACTCAAAATTTGGTCGTGGCA 58.972 42.857 5.83 0.00 0.00 4.92
132 7272 3.062466 TCGTGGCACGAGGAGGAG 61.062 66.667 36.29 8.60 46.73 3.69
134 7274 2.680352 GTGGCACGAGGAGGAGGA 60.680 66.667 0.00 0.00 0.00 3.71
137 7277 2.107953 GCACGAGGAGGAGGATGC 59.892 66.667 0.00 0.00 0.00 3.91
138 7278 2.430610 GCACGAGGAGGAGGATGCT 61.431 63.158 0.00 0.00 42.52 3.79
139 7279 1.440893 CACGAGGAGGAGGATGCTG 59.559 63.158 0.00 0.00 36.27 4.41
140 7280 1.039785 CACGAGGAGGAGGATGCTGA 61.040 60.000 0.00 0.00 36.27 4.26
141 7281 0.324738 ACGAGGAGGAGGATGCTGAA 60.325 55.000 0.00 0.00 36.27 3.02
142 7282 0.826715 CGAGGAGGAGGATGCTGAAA 59.173 55.000 0.00 0.00 36.27 2.69
143 7283 1.472376 CGAGGAGGAGGATGCTGAAAC 60.472 57.143 0.00 0.00 36.27 2.78
144 7284 1.836802 GAGGAGGAGGATGCTGAAACT 59.163 52.381 0.00 0.00 36.27 2.66
145 7285 2.238395 GAGGAGGAGGATGCTGAAACTT 59.762 50.000 0.00 0.00 36.27 2.66
146 7286 2.238395 AGGAGGAGGATGCTGAAACTTC 59.762 50.000 0.00 0.00 36.27 3.01
147 7287 2.637947 GAGGAGGATGCTGAAACTTCC 58.362 52.381 0.00 0.00 36.27 3.46
150 7290 2.637947 GAGGATGCTGAAACTTCCCTC 58.362 52.381 0.00 0.00 35.06 4.30
156 7296 1.068121 CTGAAACTTCCCTCCCCACT 58.932 55.000 0.00 0.00 0.00 4.00
164 7310 0.477597 TCCCTCCCCACTGATGGTTT 60.478 55.000 0.00 0.00 45.66 3.27
165 7311 0.409484 CCCTCCCCACTGATGGTTTT 59.591 55.000 0.00 0.00 45.66 2.43
166 7312 1.638589 CCCTCCCCACTGATGGTTTTA 59.361 52.381 0.00 0.00 45.66 1.52
198 7344 1.659098 GCTTCATACCGAACCTTCACG 59.341 52.381 0.00 0.00 0.00 4.35
203 7349 3.006110 TCATACCGAACCTTCACGTTCTT 59.994 43.478 0.00 0.00 40.03 2.52
207 7353 2.221055 CCGAACCTTCACGTTCTTCAAG 59.779 50.000 0.00 0.00 40.03 3.02
222 7371 7.831193 ACGTTCTTCAAGTATAGAGGTTAGGTA 59.169 37.037 0.00 0.00 0.00 3.08
233 7382 9.585369 GTATAGAGGTTAGGTAGTTTATGGAGT 57.415 37.037 0.00 0.00 0.00 3.85
244 7393 9.668497 AGGTAGTTTATGGAGTTTCTTTCATAC 57.332 33.333 0.00 0.00 0.00 2.39
298 7447 0.955428 GCGAGTGGCATTTCAGTCCA 60.955 55.000 0.00 0.00 42.87 4.02
299 7448 1.522668 CGAGTGGCATTTCAGTCCAA 58.477 50.000 0.00 0.00 34.51 3.53
305 7454 6.418057 AGTGGCATTTCAGTCCAAAATTTA 57.582 33.333 0.00 0.00 0.00 1.40
307 7456 6.875195 AGTGGCATTTCAGTCCAAAATTTATG 59.125 34.615 0.00 0.00 0.00 1.90
361 7510 7.224949 GTCCAAATATTGTAACTCTGCTAGACC 59.775 40.741 0.00 0.00 0.00 3.85
366 7518 2.747989 TGTAACTCTGCTAGACCTCACG 59.252 50.000 0.00 0.00 0.00 4.35
372 7524 0.809385 TGCTAGACCTCACGTACTGC 59.191 55.000 0.00 0.00 0.00 4.40
376 7528 0.314302 AGACCTCACGTACTGCACAC 59.686 55.000 0.00 0.00 0.00 3.82
379 7531 1.958579 ACCTCACGTACTGCACACTTA 59.041 47.619 0.00 0.00 0.00 2.24
397 7549 5.035443 CACTTAGCGTGTACAGGAGAATAC 58.965 45.833 19.35 0.42 38.84 1.89
400 7552 2.846039 CGTGTACAGGAGAATACGCT 57.154 50.000 10.02 0.00 31.07 5.07
415 7569 7.064253 GGAGAATACGCTTGTACACAAAATACT 59.936 37.037 0.00 0.00 35.15 2.12
455 7609 2.793278 TAGCGTGCACGTCATCATAT 57.207 45.000 36.80 16.08 42.22 1.78
456 7610 2.793278 AGCGTGCACGTCATCATATA 57.207 45.000 36.80 0.00 42.22 0.86
457 7611 3.303881 AGCGTGCACGTCATCATATAT 57.696 42.857 36.80 10.77 42.22 0.86
458 7612 3.245797 AGCGTGCACGTCATCATATATC 58.754 45.455 36.80 17.57 42.22 1.63
459 7613 2.986479 GCGTGCACGTCATCATATATCA 59.014 45.455 36.80 0.00 42.22 2.15
460 7614 3.614176 GCGTGCACGTCATCATATATCAT 59.386 43.478 36.80 0.00 42.22 2.45
461 7615 4.798387 GCGTGCACGTCATCATATATCATA 59.202 41.667 36.80 0.00 42.22 2.15
462 7616 5.460091 GCGTGCACGTCATCATATATCATAT 59.540 40.000 36.80 0.00 42.22 1.78
463 7617 6.636850 GCGTGCACGTCATCATATATCATATA 59.363 38.462 36.80 0.00 42.22 0.86
464 7618 7.149063 GCGTGCACGTCATCATATATCATATAG 60.149 40.741 36.80 5.51 42.22 1.31
494 7648 1.016130 AAAGAGACATGCACGCGAGG 61.016 55.000 15.93 5.48 0.00 4.63
548 7711 7.809665 TGACACTTATGTATAATGCATGCATC 58.190 34.615 32.25 20.14 40.14 3.91
561 7724 2.607771 GCATGCATCCGTGACAGTTTTT 60.608 45.455 14.21 0.00 0.00 1.94
676 7839 2.181021 GTCGCACCTCCCACGTAG 59.819 66.667 0.00 0.00 0.00 3.51
680 7843 1.310933 CGCACCTCCCACGTAGTACT 61.311 60.000 0.00 0.00 41.61 2.73
681 7844 1.755179 GCACCTCCCACGTAGTACTA 58.245 55.000 0.00 0.00 41.61 1.82
682 7845 1.403323 GCACCTCCCACGTAGTACTAC 59.597 57.143 21.06 21.06 41.61 2.73
683 7846 2.715046 CACCTCCCACGTAGTACTACA 58.285 52.381 28.03 10.99 41.61 2.74
684 7847 3.285484 CACCTCCCACGTAGTACTACAT 58.715 50.000 28.03 14.45 41.61 2.29
685 7848 4.454678 CACCTCCCACGTAGTACTACATA 58.545 47.826 28.03 10.53 41.61 2.29
686 7849 4.514441 CACCTCCCACGTAGTACTACATAG 59.486 50.000 28.03 17.84 41.61 2.23
687 7850 4.164988 ACCTCCCACGTAGTACTACATAGT 59.835 45.833 28.03 17.23 41.61 2.12
688 7851 5.366768 ACCTCCCACGTAGTACTACATAGTA 59.633 44.000 28.03 12.32 41.61 1.82
759 7922 2.169352 ACGTACGTAGCCTCCTCTTCTA 59.831 50.000 21.41 0.00 0.00 2.10
760 7923 2.801679 CGTACGTAGCCTCCTCTTCTAG 59.198 54.545 7.22 0.00 0.00 2.43
761 7924 1.682740 ACGTAGCCTCCTCTTCTAGC 58.317 55.000 0.00 0.00 0.00 3.42
784 8783 6.375455 AGCTTACACTTGATTGGTCATTAAGG 59.625 38.462 0.00 0.00 33.58 2.69
803 8802 3.034635 AGGGTACTGATCACATGAGACC 58.965 50.000 0.00 0.00 0.00 3.85
811 8810 3.446516 TGATCACATGAGACCTGACAGAG 59.553 47.826 3.32 0.00 0.00 3.35
842 8841 0.459585 TCACGCGTCTTCATTAGGGC 60.460 55.000 9.86 0.00 0.00 5.19
843 8842 1.153429 ACGCGTCTTCATTAGGGCC 60.153 57.895 5.58 0.00 0.00 5.80
844 8843 1.144057 CGCGTCTTCATTAGGGCCT 59.856 57.895 12.58 12.58 0.00 5.19
849 8848 2.434702 CGTCTTCATTAGGGCCTAACCT 59.565 50.000 27.61 10.90 44.75 3.50
853 8852 4.654262 TCTTCATTAGGGCCTAACCTACTG 59.346 45.833 27.61 20.43 42.63 2.74
878 8877 6.942576 GCCATCACATCTATAAATACCACCTT 59.057 38.462 0.00 0.00 0.00 3.50
911 8910 2.218603 TCTTCACCAAGCCGAAAGTTC 58.781 47.619 0.00 0.00 0.00 3.01
913 8912 0.181587 TCACCAAGCCGAAAGTTCCA 59.818 50.000 0.00 0.00 0.00 3.53
915 8914 0.106918 ACCAAGCCGAAAGTTCCACA 60.107 50.000 0.00 0.00 0.00 4.17
916 8915 1.247567 CCAAGCCGAAAGTTCCACAT 58.752 50.000 0.00 0.00 0.00 3.21
917 8916 1.200020 CCAAGCCGAAAGTTCCACATC 59.800 52.381 0.00 0.00 0.00 3.06
928 8951 6.700520 CGAAAGTTCCACATCTATAACTACCC 59.299 42.308 0.00 0.00 32.09 3.69
929 8952 7.504926 AAAGTTCCACATCTATAACTACCCA 57.495 36.000 0.00 0.00 32.09 4.51
932 8955 6.098409 AGTTCCACATCTATAACTACCCACAG 59.902 42.308 0.00 0.00 30.62 3.66
933 8956 4.344102 TCCACATCTATAACTACCCACAGC 59.656 45.833 0.00 0.00 0.00 4.40
934 8957 4.345257 CCACATCTATAACTACCCACAGCT 59.655 45.833 0.00 0.00 0.00 4.24
935 8958 5.509840 CCACATCTATAACTACCCACAGCTC 60.510 48.000 0.00 0.00 0.00 4.09
937 8960 5.069251 ACATCTATAACTACCCACAGCTCAC 59.931 44.000 0.00 0.00 0.00 3.51
938 8961 4.868268 TCTATAACTACCCACAGCTCACT 58.132 43.478 0.00 0.00 0.00 3.41
939 8962 6.009908 TCTATAACTACCCACAGCTCACTA 57.990 41.667 0.00 0.00 0.00 2.74
940 8963 6.062749 TCTATAACTACCCACAGCTCACTAG 58.937 44.000 0.00 0.00 0.00 2.57
941 8964 2.901338 ACTACCCACAGCTCACTAGA 57.099 50.000 0.00 0.00 0.00 2.43
942 8965 3.390175 ACTACCCACAGCTCACTAGAT 57.610 47.619 0.00 0.00 0.00 1.98
943 8966 3.292460 ACTACCCACAGCTCACTAGATC 58.708 50.000 0.00 0.00 0.00 2.75
944 8967 2.238084 ACCCACAGCTCACTAGATCA 57.762 50.000 0.00 0.00 0.00 2.92
945 8968 1.827969 ACCCACAGCTCACTAGATCAC 59.172 52.381 0.00 0.00 0.00 3.06
946 8969 1.202348 CCCACAGCTCACTAGATCACG 60.202 57.143 0.00 0.00 0.00 4.35
947 8970 1.745653 CCACAGCTCACTAGATCACGA 59.254 52.381 0.00 0.00 0.00 4.35
948 8971 2.223456 CCACAGCTCACTAGATCACGAG 60.223 54.545 0.00 0.00 0.00 4.18
956 8979 0.040514 CTAGATCACGAGCGAGCCAG 60.041 60.000 0.00 0.00 0.00 4.85
967 8990 2.583441 CGAGCCAGGTCCAAGGACA 61.583 63.158 20.03 0.00 46.20 4.02
968 8991 1.298014 GAGCCAGGTCCAAGGACAG 59.702 63.158 20.03 11.79 46.20 3.51
971 8994 1.986413 CCAGGTCCAAGGACAGAGG 59.014 63.158 20.03 13.83 46.20 3.69
972 8995 1.557269 CCAGGTCCAAGGACAGAGGG 61.557 65.000 20.03 11.33 46.20 4.30
973 8996 0.545309 CAGGTCCAAGGACAGAGGGA 60.545 60.000 20.03 0.00 46.20 4.20
976 8999 0.836400 GTCCAAGGACAGAGGGACCA 60.836 60.000 14.19 0.00 43.14 4.02
978 9001 0.036875 CCAAGGACAGAGGGACCAAC 59.963 60.000 0.00 0.00 0.00 3.77
979 9002 1.059913 CAAGGACAGAGGGACCAACT 58.940 55.000 0.00 0.00 0.00 3.16
980 9003 2.257207 CAAGGACAGAGGGACCAACTA 58.743 52.381 0.00 0.00 0.00 2.24
981 9004 2.234908 CAAGGACAGAGGGACCAACTAG 59.765 54.545 0.00 0.00 0.00 2.57
984 9007 1.478916 GACAGAGGGACCAACTAGCTC 59.521 57.143 0.00 0.00 0.00 4.09
985 9008 1.077993 ACAGAGGGACCAACTAGCTCT 59.922 52.381 0.00 0.00 0.00 4.09
986 9009 2.312140 ACAGAGGGACCAACTAGCTCTA 59.688 50.000 0.00 0.00 0.00 2.43
987 9010 2.691011 CAGAGGGACCAACTAGCTCTAC 59.309 54.545 0.00 0.00 0.00 2.59
988 9011 2.583566 AGAGGGACCAACTAGCTCTACT 59.416 50.000 0.00 0.00 0.00 2.57
989 9012 2.691011 GAGGGACCAACTAGCTCTACTG 59.309 54.545 0.00 0.00 0.00 2.74
990 9013 1.137282 GGGACCAACTAGCTCTACTGC 59.863 57.143 0.00 0.00 0.00 4.40
991 9014 2.104170 GGACCAACTAGCTCTACTGCT 58.896 52.381 0.00 0.00 46.11 4.24
992 9015 2.100087 GGACCAACTAGCTCTACTGCTC 59.900 54.545 0.00 0.00 42.97 4.26
993 9016 1.746220 ACCAACTAGCTCTACTGCTCG 59.254 52.381 0.00 0.00 42.97 5.03
994 9017 2.017782 CCAACTAGCTCTACTGCTCGA 58.982 52.381 0.00 0.00 42.97 4.04
995 9018 2.621055 CCAACTAGCTCTACTGCTCGAT 59.379 50.000 0.00 0.00 42.97 3.59
996 9019 3.304391 CCAACTAGCTCTACTGCTCGATC 60.304 52.174 0.00 0.00 42.97 3.69
997 9020 2.139917 ACTAGCTCTACTGCTCGATCG 58.860 52.381 9.36 9.36 42.97 3.69
998 9021 1.463056 CTAGCTCTACTGCTCGATCGG 59.537 57.143 16.41 7.26 42.97 4.18
1102 9131 2.659063 CCCGACATGCTCCAGGACA 61.659 63.158 0.00 0.00 0.00 4.02
1219 9279 1.339235 GAATGCATGCGTGTGTGTGC 61.339 55.000 14.40 0.00 38.05 4.57
1513 9582 2.935481 CCCTGGAGGTGGGCTTCA 60.935 66.667 0.00 0.00 37.99 3.02
1791 10085 4.617875 CCAAAGTAGGCCACGAGG 57.382 61.111 5.01 0.00 38.23 4.63
1863 10159 4.093390 CGTGCGTACGTAAATTATCACC 57.907 45.455 18.32 0.00 44.99 4.02
1864 10160 3.547068 CGTGCGTACGTAAATTATCACCA 59.453 43.478 18.32 0.00 44.99 4.17
1865 10161 4.546833 CGTGCGTACGTAAATTATCACCAC 60.547 45.833 18.32 10.19 44.99 4.16
1866 10162 4.326817 GTGCGTACGTAAATTATCACCACA 59.673 41.667 17.90 0.00 0.00 4.17
1867 10163 4.326817 TGCGTACGTAAATTATCACCACAC 59.673 41.667 17.90 0.00 0.00 3.82
1868 10164 4.546833 GCGTACGTAAATTATCACCACACG 60.547 45.833 17.90 0.00 0.00 4.49
1869 10165 4.027458 CGTACGTAAATTATCACCACACGG 60.027 45.833 7.22 0.00 38.77 4.94
1881 10293 2.037144 ACCACACGGTCCTATATGTCC 58.963 52.381 0.00 0.00 44.71 4.02
1882 10294 1.343465 CCACACGGTCCTATATGTCCC 59.657 57.143 0.00 0.00 0.00 4.46
1888 10300 3.335786 ACGGTCCTATATGTCCCCTCATA 59.664 47.826 0.00 0.00 35.24 2.15
1889 10301 3.700038 CGGTCCTATATGTCCCCTCATAC 59.300 52.174 0.00 0.00 33.87 2.39
1890 10302 4.570079 CGGTCCTATATGTCCCCTCATACT 60.570 50.000 0.00 0.00 33.87 2.12
1891 10303 5.342866 GGTCCTATATGTCCCCTCATACTT 58.657 45.833 0.00 0.00 33.87 2.24
1892 10304 6.500336 GGTCCTATATGTCCCCTCATACTTA 58.500 44.000 0.00 0.00 33.87 2.24
1893 10305 7.133483 GGTCCTATATGTCCCCTCATACTTAT 58.867 42.308 0.00 0.00 33.87 1.73
1894 10306 7.624077 GGTCCTATATGTCCCCTCATACTTATT 59.376 40.741 0.00 0.00 33.87 1.40
1900 10312 5.030147 TGTCCCCTCATACTTATTGTCTGT 58.970 41.667 0.00 0.00 0.00 3.41
1909 10321 9.877178 CTCATACTTATTGTCTGTCTTTTAGGT 57.123 33.333 0.00 0.00 0.00 3.08
1910 10322 9.653287 TCATACTTATTGTCTGTCTTTTAGGTG 57.347 33.333 0.00 0.00 0.00 4.00
1911 10323 9.653287 CATACTTATTGTCTGTCTTTTAGGTGA 57.347 33.333 0.00 0.00 0.00 4.02
1913 10325 8.974060 ACTTATTGTCTGTCTTTTAGGTGAAA 57.026 30.769 0.00 0.00 0.00 2.69
1925 10337 5.759506 TTTAGGTGAAATGAAAAGCGTCA 57.240 34.783 0.00 0.00 0.00 4.35
1956 10368 2.488952 TCGTTGTTGAGCTGTATGCAA 58.511 42.857 0.00 0.00 45.94 4.08
2046 10458 1.923356 AAATGCGTCCATGGGTTTCT 58.077 45.000 13.02 0.00 0.00 2.52
2050 10462 0.035820 GCGTCCATGGGTTTCTGGTA 60.036 55.000 13.02 0.00 34.03 3.25
2087 10530 3.772025 ACTTTGTCCCAATCCACACAAAA 59.228 39.130 0.00 0.00 38.07 2.44
2124 10567 5.367945 TTTTTAGGCTAGTCATAGTGGGG 57.632 43.478 0.00 0.00 0.00 4.96
2126 10569 2.390225 AGGCTAGTCATAGTGGGGAG 57.610 55.000 0.00 0.00 0.00 4.30
2127 10570 1.576272 AGGCTAGTCATAGTGGGGAGT 59.424 52.381 0.00 0.00 0.00 3.85
2128 10571 2.789992 AGGCTAGTCATAGTGGGGAGTA 59.210 50.000 0.00 0.00 0.00 2.59
2130 10573 3.321396 GGCTAGTCATAGTGGGGAGTAAC 59.679 52.174 0.00 0.00 0.00 2.50
2134 10577 6.016108 GCTAGTCATAGTGGGGAGTAACTTAG 60.016 46.154 0.00 0.00 0.00 2.18
2135 10578 6.088541 AGTCATAGTGGGGAGTAACTTAGA 57.911 41.667 0.00 0.00 0.00 2.10
2136 10579 5.892686 AGTCATAGTGGGGAGTAACTTAGAC 59.107 44.000 0.00 0.00 33.07 2.59
2137 10580 5.892686 GTCATAGTGGGGAGTAACTTAGACT 59.107 44.000 0.00 0.00 31.58 3.24
2138 10581 7.059156 GTCATAGTGGGGAGTAACTTAGACTA 58.941 42.308 0.00 0.00 31.58 2.59
2139 10582 7.229106 GTCATAGTGGGGAGTAACTTAGACTAG 59.771 44.444 0.00 0.00 31.58 2.57
2140 10583 5.533333 AGTGGGGAGTAACTTAGACTAGT 57.467 43.478 0.00 0.00 0.00 2.57
2141 10584 5.262804 AGTGGGGAGTAACTTAGACTAGTG 58.737 45.833 0.00 0.00 0.00 2.74
2144 10587 5.222192 TGGGGAGTAACTTAGACTAGTGTCA 60.222 44.000 0.00 0.00 45.20 3.58
2146 10589 6.183360 GGGGAGTAACTTAGACTAGTGTCATG 60.183 46.154 0.00 0.00 45.20 3.07
2148 10591 6.127703 GGAGTAACTTAGACTAGTGTCATGCA 60.128 42.308 0.00 0.00 45.20 3.96
2149 10592 7.411486 AGTAACTTAGACTAGTGTCATGCAT 57.589 36.000 0.00 0.00 45.20 3.96
2150 10593 8.521170 AGTAACTTAGACTAGTGTCATGCATA 57.479 34.615 0.00 0.00 45.20 3.14
2151 10594 9.137459 AGTAACTTAGACTAGTGTCATGCATAT 57.863 33.333 0.00 0.00 45.20 1.78
2153 10596 7.588497 ACTTAGACTAGTGTCATGCATATGA 57.412 36.000 6.97 0.00 45.20 2.15
2166 10609 6.643388 TCATGCATATGACACTAGTCTTTGT 58.357 36.000 6.97 0.00 45.20 2.83
2167 10610 7.105588 TCATGCATATGACACTAGTCTTTGTT 58.894 34.615 6.97 0.00 45.20 2.83
2168 10611 8.257306 TCATGCATATGACACTAGTCTTTGTTA 58.743 33.333 6.97 0.00 45.20 2.41
2169 10612 7.827819 TGCATATGACACTAGTCTTTGTTAC 57.172 36.000 6.97 0.00 45.20 2.50
2170 10613 7.611770 TGCATATGACACTAGTCTTTGTTACT 58.388 34.615 6.97 0.00 45.20 2.24
2171 10614 8.745590 TGCATATGACACTAGTCTTTGTTACTA 58.254 33.333 6.97 0.00 45.20 1.82
2172 10615 9.021863 GCATATGACACTAGTCTTTGTTACTAC 57.978 37.037 6.97 0.00 45.20 2.73
2175 10618 7.211966 TGACACTAGTCTTTGTTACTACTCC 57.788 40.000 0.00 0.00 45.20 3.85
2176 10619 6.208204 TGACACTAGTCTTTGTTACTACTCCC 59.792 42.308 0.00 0.00 45.20 4.30
2177 10620 6.313324 ACACTAGTCTTTGTTACTACTCCCT 58.687 40.000 0.00 0.00 0.00 4.20
2179 10622 5.951148 ACTAGTCTTTGTTACTACTCCCTCC 59.049 44.000 0.00 0.00 0.00 4.30
2180 10623 3.762823 AGTCTTTGTTACTACTCCCTCCG 59.237 47.826 0.00 0.00 0.00 4.63
2181 10624 3.509184 GTCTTTGTTACTACTCCCTCCGT 59.491 47.826 0.00 0.00 0.00 4.69
2183 10626 2.134789 TGTTACTACTCCCTCCGTCC 57.865 55.000 0.00 0.00 0.00 4.79
2185 11374 0.107017 TTACTACTCCCTCCGTCCGG 60.107 60.000 0.00 0.00 0.00 5.14
2189 11378 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
2191 11380 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
2192 11381 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
2193 11382 0.828677 CCCTCCGTCCGGAAATACTT 59.171 55.000 5.23 0.00 44.66 2.24
2194 11383 1.472728 CCCTCCGTCCGGAAATACTTG 60.473 57.143 5.23 0.00 44.66 3.16
2204 11393 6.403200 CGTCCGGAAATACTTGTCATCAAAAT 60.403 38.462 5.23 0.00 32.87 1.82
2205 11394 6.747280 GTCCGGAAATACTTGTCATCAAAATG 59.253 38.462 5.23 0.00 32.87 2.32
2206 11395 6.035843 CCGGAAATACTTGTCATCAAAATGG 58.964 40.000 0.00 0.00 33.42 3.16
2209 11398 7.433131 CGGAAATACTTGTCATCAAAATGGATG 59.567 37.037 0.00 0.00 44.78 3.51
2262 11451 8.147058 ACATCTAGATACATCCATTTCACTGAC 58.853 37.037 4.54 0.00 0.00 3.51
2263 11452 7.660030 TCTAGATACATCCATTTCACTGACA 57.340 36.000 0.00 0.00 0.00 3.58
2265 11454 8.200120 TCTAGATACATCCATTTCACTGACAAG 58.800 37.037 0.00 0.00 0.00 3.16
2267 11456 7.851228 AGATACATCCATTTCACTGACAAGTA 58.149 34.615 0.00 0.00 33.79 2.24
2268 11457 8.489489 AGATACATCCATTTCACTGACAAGTAT 58.511 33.333 0.00 0.00 33.79 2.12
2269 11458 9.113838 GATACATCCATTTCACTGACAAGTATT 57.886 33.333 0.00 0.00 33.79 1.89
2270 11459 7.765695 ACATCCATTTCACTGACAAGTATTT 57.234 32.000 0.00 0.00 33.79 1.40
2271 11460 7.820648 ACATCCATTTCACTGACAAGTATTTC 58.179 34.615 0.00 0.00 33.79 2.17
2272 11461 6.817765 TCCATTTCACTGACAAGTATTTCC 57.182 37.500 0.00 0.00 33.79 3.13
2273 11462 5.411361 TCCATTTCACTGACAAGTATTTCCG 59.589 40.000 0.00 0.00 33.79 4.30
2274 11463 5.391950 CCATTTCACTGACAAGTATTTCCGG 60.392 44.000 0.00 0.00 33.79 5.14
2275 11464 4.610605 TTCACTGACAAGTATTTCCGGA 57.389 40.909 0.00 0.00 33.79 5.14
2276 11465 3.921677 TCACTGACAAGTATTTCCGGAC 58.078 45.455 1.83 0.00 33.79 4.79
2277 11466 2.666508 CACTGACAAGTATTTCCGGACG 59.333 50.000 1.83 0.00 33.79 4.79
2278 11467 2.268298 CTGACAAGTATTTCCGGACGG 58.732 52.381 1.83 3.96 0.00 4.79
2279 11468 1.894466 TGACAAGTATTTCCGGACGGA 59.106 47.619 1.83 9.76 43.52 4.69
2280 11469 2.094390 TGACAAGTATTTCCGGACGGAG 60.094 50.000 13.64 3.15 46.06 4.63
2281 11470 1.206371 ACAAGTATTTCCGGACGGAGG 59.794 52.381 13.64 0.00 46.06 4.30
2282 11471 0.828677 AAGTATTTCCGGACGGAGGG 59.171 55.000 13.64 0.00 46.06 4.30
2283 11472 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20
2286 11475 0.032813 ATTTCCGGACGGAGGGAGTA 60.033 55.000 13.64 0.00 46.06 2.59
2287 11476 0.967380 TTTCCGGACGGAGGGAGTAC 60.967 60.000 13.64 0.00 46.06 2.73
2288 11477 2.832201 CCGGACGGAGGGAGTACC 60.832 72.222 4.40 0.00 37.50 3.34
2300 11489 3.906720 GGGAGTACCTTCATAGTGCAA 57.093 47.619 0.00 0.00 35.85 4.08
2301 11490 4.216411 GGGAGTACCTTCATAGTGCAAA 57.784 45.455 0.00 0.00 35.85 3.68
2302 11491 4.192317 GGGAGTACCTTCATAGTGCAAAG 58.808 47.826 0.00 0.00 35.85 2.77
2304 11493 5.105064 GGGAGTACCTTCATAGTGCAAAGTA 60.105 44.000 0.00 0.00 35.85 2.24
2305 11494 6.403878 GGAGTACCTTCATAGTGCAAAGTAA 58.596 40.000 0.00 0.00 0.00 2.24
2306 11495 6.313164 GGAGTACCTTCATAGTGCAAAGTAAC 59.687 42.308 0.00 0.00 0.00 2.50
2310 11499 7.611213 ACCTTCATAGTGCAAAGTAACATAC 57.389 36.000 0.00 0.00 0.00 2.39
2312 11501 7.663905 ACCTTCATAGTGCAAAGTAACATACAA 59.336 33.333 0.00 0.00 0.00 2.41
2314 11503 8.615878 TTCATAGTGCAAAGTAACATACAAGT 57.384 30.769 0.00 0.00 0.00 3.16
2316 11505 9.366216 TCATAGTGCAAAGTAACATACAAGTAG 57.634 33.333 0.00 0.00 0.00 2.57
2317 11506 9.151471 CATAGTGCAAAGTAACATACAAGTAGT 57.849 33.333 0.00 0.00 0.00 2.73
2321 11510 9.146984 GTGCAAAGTAACATACAAGTAGTATCA 57.853 33.333 0.00 0.00 41.47 2.15
2322 11511 9.884636 TGCAAAGTAACATACAAGTAGTATCAT 57.115 29.630 0.00 0.00 41.47 2.45
2370 11559 5.942872 AGACTCATTTTACTTTGGATTGCG 58.057 37.500 0.00 0.00 0.00 4.85
2371 11560 5.473504 AGACTCATTTTACTTTGGATTGCGT 59.526 36.000 0.00 0.00 0.00 5.24
2372 11561 6.016276 AGACTCATTTTACTTTGGATTGCGTT 60.016 34.615 0.00 0.00 0.00 4.84
2373 11562 7.174253 AGACTCATTTTACTTTGGATTGCGTTA 59.826 33.333 0.00 0.00 0.00 3.18
2374 11563 7.826690 ACTCATTTTACTTTGGATTGCGTTAT 58.173 30.769 0.00 0.00 0.00 1.89
2375 11564 7.754924 ACTCATTTTACTTTGGATTGCGTTATG 59.245 33.333 0.00 0.00 0.00 1.90
2378 11567 9.347934 CATTTTACTTTGGATTGCGTTATGTTA 57.652 29.630 0.00 0.00 0.00 2.41
2379 11568 8.730970 TTTTACTTTGGATTGCGTTATGTTAC 57.269 30.769 0.00 0.00 0.00 2.50
2380 11569 5.950758 ACTTTGGATTGCGTTATGTTACA 57.049 34.783 0.00 0.00 0.00 2.41
2383 11572 6.651643 ACTTTGGATTGCGTTATGTTACAGTA 59.348 34.615 0.00 0.00 0.00 2.74
2414 11603 8.561738 TTATGTTACTCCAAACATCTCTTTCC 57.438 34.615 5.55 0.00 44.79 3.13
2415 11604 6.187727 TGTTACTCCAAACATCTCTTTCCT 57.812 37.500 0.00 0.00 34.50 3.36
2416 11605 6.231211 TGTTACTCCAAACATCTCTTTCCTC 58.769 40.000 0.00 0.00 34.50 3.71
2418 11607 5.511386 ACTCCAAACATCTCTTTCCTCAT 57.489 39.130 0.00 0.00 0.00 2.90
2420 11609 7.020827 ACTCCAAACATCTCTTTCCTCATTA 57.979 36.000 0.00 0.00 0.00 1.90
2421 11610 7.461749 ACTCCAAACATCTCTTTCCTCATTAA 58.538 34.615 0.00 0.00 0.00 1.40
2422 11611 7.391833 ACTCCAAACATCTCTTTCCTCATTAAC 59.608 37.037 0.00 0.00 0.00 2.01
2424 11613 7.607991 TCCAAACATCTCTTTCCTCATTAACTC 59.392 37.037 0.00 0.00 0.00 3.01
2425 11614 7.609532 CCAAACATCTCTTTCCTCATTAACTCT 59.390 37.037 0.00 0.00 0.00 3.24
2426 11615 9.658799 CAAACATCTCTTTCCTCATTAACTCTA 57.341 33.333 0.00 0.00 0.00 2.43
2428 11617 9.829507 AACATCTCTTTCCTCATTAACTCTATG 57.170 33.333 0.00 0.00 0.00 2.23
2429 11618 7.930865 ACATCTCTTTCCTCATTAACTCTATGC 59.069 37.037 0.00 0.00 0.00 3.14
2430 11619 6.821388 TCTCTTTCCTCATTAACTCTATGCC 58.179 40.000 0.00 0.00 0.00 4.40
2431 11620 6.384015 TCTCTTTCCTCATTAACTCTATGCCA 59.616 38.462 0.00 0.00 0.00 4.92
2432 11621 6.349300 TCTTTCCTCATTAACTCTATGCCAC 58.651 40.000 0.00 0.00 0.00 5.01
2433 11622 5.692115 TTCCTCATTAACTCTATGCCACA 57.308 39.130 0.00 0.00 0.00 4.17
2435 11624 6.994421 TCCTCATTAACTCTATGCCACATA 57.006 37.500 0.00 0.00 0.00 2.29
2436 11625 7.373617 TCCTCATTAACTCTATGCCACATAA 57.626 36.000 0.00 0.00 0.00 1.90
2438 11627 6.148480 CCTCATTAACTCTATGCCACATAAGC 59.852 42.308 0.00 0.00 0.00 3.09
2442 11631 5.567138 AACTCTATGCCACATAAGCAAAC 57.433 39.130 0.00 0.00 44.83 2.93
2443 11632 3.947834 ACTCTATGCCACATAAGCAAACC 59.052 43.478 0.00 0.00 44.83 3.27
2444 11633 4.202441 CTCTATGCCACATAAGCAAACCT 58.798 43.478 0.00 0.00 44.83 3.50
2445 11634 3.947196 TCTATGCCACATAAGCAAACCTG 59.053 43.478 0.00 0.00 44.83 4.00
2446 11635 1.993956 TGCCACATAAGCAAACCTGT 58.006 45.000 0.00 0.00 37.28 4.00
2447 11636 1.885887 TGCCACATAAGCAAACCTGTC 59.114 47.619 0.00 0.00 37.28 3.51
2448 11637 2.162681 GCCACATAAGCAAACCTGTCT 58.837 47.619 0.00 0.00 0.00 3.41
2449 11638 2.558359 GCCACATAAGCAAACCTGTCTT 59.442 45.455 0.00 0.00 0.00 3.01
2450 11639 3.612479 GCCACATAAGCAAACCTGTCTTG 60.612 47.826 0.00 0.00 0.00 3.02
2451 11640 3.820467 CCACATAAGCAAACCTGTCTTGA 59.180 43.478 0.00 0.00 0.00 3.02
2452 11641 4.278170 CCACATAAGCAAACCTGTCTTGAA 59.722 41.667 0.00 0.00 0.00 2.69
2453 11642 5.221224 CCACATAAGCAAACCTGTCTTGAAA 60.221 40.000 0.00 0.00 0.00 2.69
2454 11643 6.449698 CACATAAGCAAACCTGTCTTGAAAT 58.550 36.000 0.00 0.00 0.00 2.17
2455 11644 7.309133 CCACATAAGCAAACCTGTCTTGAAATA 60.309 37.037 0.00 0.00 0.00 1.40
2456 11645 7.538678 CACATAAGCAAACCTGTCTTGAAATAC 59.461 37.037 0.00 0.00 0.00 1.89
2457 11646 4.749245 AGCAAACCTGTCTTGAAATACG 57.251 40.909 0.00 0.00 0.00 3.06
2458 11647 3.058224 AGCAAACCTGTCTTGAAATACGC 60.058 43.478 0.00 0.00 0.00 4.42
2459 11648 3.058224 GCAAACCTGTCTTGAAATACGCT 60.058 43.478 0.00 0.00 0.00 5.07
2460 11649 4.153475 GCAAACCTGTCTTGAAATACGCTA 59.847 41.667 0.00 0.00 0.00 4.26
2461 11650 5.334569 GCAAACCTGTCTTGAAATACGCTAA 60.335 40.000 0.00 0.00 0.00 3.09
2462 11651 6.307155 CAAACCTGTCTTGAAATACGCTAAG 58.693 40.000 0.00 0.00 0.00 2.18
2463 11652 5.148651 ACCTGTCTTGAAATACGCTAAGT 57.851 39.130 0.00 0.00 0.00 2.24
2464 11653 5.548406 ACCTGTCTTGAAATACGCTAAGTT 58.452 37.500 0.00 0.00 0.00 2.66
2465 11654 6.694447 ACCTGTCTTGAAATACGCTAAGTTA 58.306 36.000 0.00 0.00 0.00 2.24
2466 11655 6.589139 ACCTGTCTTGAAATACGCTAAGTTAC 59.411 38.462 0.00 0.00 0.00 2.50
2467 11656 6.812160 CCTGTCTTGAAATACGCTAAGTTACT 59.188 38.462 0.00 0.00 0.00 2.24
2468 11657 7.009357 CCTGTCTTGAAATACGCTAAGTTACTC 59.991 40.741 0.00 0.00 0.00 2.59
2469 11658 6.810182 TGTCTTGAAATACGCTAAGTTACTCC 59.190 38.462 0.00 0.00 0.00 3.85
2470 11659 6.255237 GTCTTGAAATACGCTAAGTTACTCCC 59.745 42.308 0.00 0.00 0.00 4.30
2471 11660 5.664294 TGAAATACGCTAAGTTACTCCCA 57.336 39.130 0.00 0.00 0.00 4.37
2472 11661 5.413499 TGAAATACGCTAAGTTACTCCCAC 58.587 41.667 0.00 0.00 0.00 4.61
2473 11662 5.186409 TGAAATACGCTAAGTTACTCCCACT 59.814 40.000 0.00 0.00 0.00 4.00
2474 11663 6.377996 TGAAATACGCTAAGTTACTCCCACTA 59.622 38.462 0.00 0.00 0.00 2.74
2475 11664 6.973460 AATACGCTAAGTTACTCCCACTAT 57.027 37.500 0.00 0.00 0.00 2.12
2476 11665 4.650754 ACGCTAAGTTACTCCCACTATG 57.349 45.455 0.00 0.00 0.00 2.23
2477 11666 4.275810 ACGCTAAGTTACTCCCACTATGA 58.724 43.478 0.00 0.00 0.00 2.15
2478 11667 4.097589 ACGCTAAGTTACTCCCACTATGAC 59.902 45.833 0.00 0.00 0.00 3.06
2479 11668 4.499357 CGCTAAGTTACTCCCACTATGACC 60.499 50.000 0.00 0.00 0.00 4.02
2480 11669 4.404715 GCTAAGTTACTCCCACTATGACCA 59.595 45.833 0.00 0.00 0.00 4.02
2481 11670 5.452077 GCTAAGTTACTCCCACTATGACCAG 60.452 48.000 0.00 0.00 0.00 4.00
2482 11671 2.766828 AGTTACTCCCACTATGACCAGC 59.233 50.000 0.00 0.00 0.00 4.85
2483 11672 1.789523 TACTCCCACTATGACCAGCC 58.210 55.000 0.00 0.00 0.00 4.85
2484 11673 0.043334 ACTCCCACTATGACCAGCCT 59.957 55.000 0.00 0.00 0.00 4.58
2485 11674 1.207791 CTCCCACTATGACCAGCCTT 58.792 55.000 0.00 0.00 0.00 4.35
2486 11675 2.292918 ACTCCCACTATGACCAGCCTTA 60.293 50.000 0.00 0.00 0.00 2.69
2487 11676 2.366916 CTCCCACTATGACCAGCCTTAG 59.633 54.545 0.00 0.00 0.00 2.18
2488 11677 2.023404 TCCCACTATGACCAGCCTTAGA 60.023 50.000 0.00 0.00 0.00 2.10
2489 11678 2.366916 CCCACTATGACCAGCCTTAGAG 59.633 54.545 0.00 0.00 0.00 2.43
2490 11679 3.300388 CCACTATGACCAGCCTTAGAGA 58.700 50.000 0.00 0.00 0.00 3.10
2491 11680 3.068873 CCACTATGACCAGCCTTAGAGAC 59.931 52.174 0.00 0.00 0.00 3.36
2492 11681 3.701542 CACTATGACCAGCCTTAGAGACA 59.298 47.826 0.00 0.00 0.00 3.41
2493 11682 4.160439 CACTATGACCAGCCTTAGAGACAA 59.840 45.833 0.00 0.00 0.00 3.18
2494 11683 3.902881 ATGACCAGCCTTAGAGACAAG 57.097 47.619 0.00 0.00 0.00 3.16
2495 11684 1.902508 TGACCAGCCTTAGAGACAAGG 59.097 52.381 0.00 0.00 46.74 3.61
2509 11698 1.374758 CAAGGTGTCTGCCGAGTCC 60.375 63.158 0.00 0.00 0.00 3.85
2517 11706 0.608308 TCTGCCGAGTCCGAGAAGAA 60.608 55.000 0.00 0.00 38.22 2.52
2533 11722 6.839820 GAGAAGAACTCGAACCTAACAAAA 57.160 37.500 0.00 0.00 35.84 2.44
2534 11723 6.600246 AGAAGAACTCGAACCTAACAAAAC 57.400 37.500 0.00 0.00 0.00 2.43
2539 11728 4.969484 ACTCGAACCTAACAAAACCATCT 58.031 39.130 0.00 0.00 0.00 2.90
2542 11731 5.240121 TCGAACCTAACAAAACCATCTACC 58.760 41.667 0.00 0.00 0.00 3.18
2543 11732 4.998672 CGAACCTAACAAAACCATCTACCA 59.001 41.667 0.00 0.00 0.00 3.25
2544 11733 5.121768 CGAACCTAACAAAACCATCTACCAG 59.878 44.000 0.00 0.00 0.00 4.00
2546 11735 5.948842 ACCTAACAAAACCATCTACCAGTT 58.051 37.500 0.00 0.00 0.00 3.16
2554 11743 8.557450 ACAAAACCATCTACCAGTTAGGATTAT 58.443 33.333 0.00 0.00 41.22 1.28
2558 11747 6.960542 ACCATCTACCAGTTAGGATTATAGGG 59.039 42.308 0.00 0.00 41.22 3.53
2561 11750 6.387127 TCTACCAGTTAGGATTATAGGGCAA 58.613 40.000 0.00 0.00 41.22 4.52
2568 11757 7.936847 CAGTTAGGATTATAGGGCAACAACATA 59.063 37.037 0.00 0.00 39.74 2.29
2569 11758 7.937394 AGTTAGGATTATAGGGCAACAACATAC 59.063 37.037 0.00 0.00 39.74 2.39
2581 11770 6.215845 GGCAACAACATACACAAAGAGAATT 58.784 36.000 0.00 0.00 0.00 2.17
2584 11773 6.331369 ACAACATACACAAAGAGAATTGGG 57.669 37.500 0.00 0.00 39.65 4.12
2592 11781 5.656416 ACACAAAGAGAATTGGGAAAAGTGA 59.344 36.000 0.00 0.00 37.16 3.41
2594 11783 7.041107 CACAAAGAGAATTGGGAAAAGTGAAA 58.959 34.615 0.00 0.00 35.69 2.69
2595 11784 7.548780 CACAAAGAGAATTGGGAAAAGTGAAAA 59.451 33.333 0.00 0.00 35.69 2.29
2646 11839 0.591236 CGAAGGCAACACCAACAACG 60.591 55.000 0.00 0.00 43.14 4.10
2648 11841 0.681564 AAGGCAACACCAACAACGGA 60.682 50.000 0.00 0.00 43.14 4.69
2662 11855 4.331356 CGGACGAGAACAAACCGT 57.669 55.556 0.00 0.00 38.97 4.83
2663 11856 1.850640 CGGACGAGAACAAACCGTG 59.149 57.895 0.00 0.00 38.97 4.94
2667 11860 2.132762 GACGAGAACAAACCGTGTCAT 58.867 47.619 0.00 0.00 40.60 3.06
2671 11864 1.336755 AGAACAAACCGTGTCATTGCC 59.663 47.619 0.00 0.00 40.60 4.52
2675 11868 1.066908 CAAACCGTGTCATTGCCAACT 59.933 47.619 0.00 0.00 0.00 3.16
2680 11873 0.168128 GTGTCATTGCCAACTACCGC 59.832 55.000 0.00 0.00 0.00 5.68
2682 11875 0.958382 GTCATTGCCAACTACCGCCA 60.958 55.000 0.00 0.00 0.00 5.69
2693 11887 2.609183 CTACCGCCACTCGCCTACAC 62.609 65.000 0.00 0.00 36.73 2.90
2749 11943 2.154963 CACCGTGTGAGTATTGTGTTCG 59.845 50.000 0.00 0.00 35.23 3.95
2751 11945 2.798283 CCGTGTGAGTATTGTGTTCGTT 59.202 45.455 0.00 0.00 0.00 3.85
2756 11950 5.688621 GTGTGAGTATTGTGTTCGTTGACTA 59.311 40.000 0.00 0.00 0.00 2.59
2764 11958 2.937799 GTGTTCGTTGACTACCACCAAA 59.062 45.455 0.00 0.00 0.00 3.28
2767 11961 1.764134 TCGTTGACTACCACCAAAGGT 59.236 47.619 0.00 0.00 45.72 3.50
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.484264 CCCGTCAATGGACAAGTTTCTC 59.516 50.000 0.13 0.00 44.54 2.87
15 3088 3.758973 TTTTCGTGGCAGCCCGTCA 62.759 57.895 18.38 7.30 0.00 4.35
23 3097 1.737236 CTTCATCGGATTTTCGTGGCA 59.263 47.619 0.00 0.00 0.00 4.92
28 3102 1.927174 ACTCGCTTCATCGGATTTTCG 59.073 47.619 0.00 0.00 0.00 3.46
41 3115 1.745087 CCATTAATGCCACACTCGCTT 59.255 47.619 10.11 0.00 0.00 4.68
69 7205 2.045926 GCACCACAGGCGAGGAAT 60.046 61.111 0.00 0.00 0.00 3.01
72 7208 2.821366 GATGCACCACAGGCGAGG 60.821 66.667 0.00 0.00 0.00 4.63
93 7229 2.472816 CAAATTTTGAGTTGTGCGGCT 58.527 42.857 2.88 0.00 0.00 5.52
122 7259 0.324738 TTCAGCATCCTCCTCCTCGT 60.325 55.000 0.00 0.00 0.00 4.18
132 7272 1.683319 GGGAGGGAAGTTTCAGCATCC 60.683 57.143 0.00 0.00 0.00 3.51
134 7274 0.332972 GGGGAGGGAAGTTTCAGCAT 59.667 55.000 0.00 0.00 0.00 3.79
137 7277 1.068121 AGTGGGGAGGGAAGTTTCAG 58.932 55.000 0.00 0.00 0.00 3.02
138 7278 0.771127 CAGTGGGGAGGGAAGTTTCA 59.229 55.000 0.00 0.00 0.00 2.69
139 7279 1.064825 TCAGTGGGGAGGGAAGTTTC 58.935 55.000 0.00 0.00 0.00 2.78
140 7280 1.355720 CATCAGTGGGGAGGGAAGTTT 59.644 52.381 0.00 0.00 0.00 2.66
141 7281 0.995024 CATCAGTGGGGAGGGAAGTT 59.005 55.000 0.00 0.00 0.00 2.66
142 7282 0.916358 CCATCAGTGGGGAGGGAAGT 60.916 60.000 0.00 0.00 41.15 3.01
143 7283 1.918253 CCATCAGTGGGGAGGGAAG 59.082 63.158 0.00 0.00 41.15 3.46
144 7284 4.169452 CCATCAGTGGGGAGGGAA 57.831 61.111 0.00 0.00 41.15 3.97
156 7296 5.048083 AGCTCGCTCAAAATTAAAACCATCA 60.048 36.000 0.00 0.00 0.00 3.07
164 7310 5.220586 CGGTATGAAGCTCGCTCAAAATTAA 60.221 40.000 0.00 0.00 0.00 1.40
165 7311 4.270084 CGGTATGAAGCTCGCTCAAAATTA 59.730 41.667 0.00 0.00 0.00 1.40
166 7312 3.063997 CGGTATGAAGCTCGCTCAAAATT 59.936 43.478 0.00 0.00 0.00 1.82
198 7344 9.187996 ACTACCTAACCTCTATACTTGAAGAAC 57.812 37.037 0.00 0.00 0.00 3.01
207 7353 9.585369 ACTCCATAAACTACCTAACCTCTATAC 57.415 37.037 0.00 0.00 0.00 1.47
244 7393 5.169992 TGCCTCTGGATCACCATATAATG 57.830 43.478 0.00 0.00 45.87 1.90
248 7397 5.071519 GCTATATGCCTCTGGATCACCATAT 59.928 44.000 0.00 0.00 39.66 1.78
249 7398 4.406972 GCTATATGCCTCTGGATCACCATA 59.593 45.833 0.00 0.00 39.66 2.74
329 7478 7.483307 CAGAGTTACAATATTTGGACCAATGG 58.517 38.462 7.99 0.00 34.12 3.16
330 7479 6.974622 GCAGAGTTACAATATTTGGACCAATG 59.025 38.462 7.99 5.86 34.12 2.82
331 7480 6.891908 AGCAGAGTTACAATATTTGGACCAAT 59.108 34.615 7.99 1.22 34.12 3.16
332 7481 6.245408 AGCAGAGTTACAATATTTGGACCAA 58.755 36.000 1.69 1.69 34.12 3.67
334 7483 7.224949 GTCTAGCAGAGTTACAATATTTGGACC 59.775 40.741 0.00 0.00 34.12 4.46
335 7484 7.224949 GGTCTAGCAGAGTTACAATATTTGGAC 59.775 40.741 0.00 0.00 34.12 4.02
336 7485 7.125811 AGGTCTAGCAGAGTTACAATATTTGGA 59.874 37.037 0.00 0.00 34.12 3.53
337 7486 7.275920 AGGTCTAGCAGAGTTACAATATTTGG 58.724 38.462 0.00 0.00 34.12 3.28
338 7487 7.981789 TGAGGTCTAGCAGAGTTACAATATTTG 59.018 37.037 0.00 0.00 0.00 2.32
339 7488 7.982354 GTGAGGTCTAGCAGAGTTACAATATTT 59.018 37.037 0.00 0.00 0.00 1.40
347 7496 3.069079 ACGTGAGGTCTAGCAGAGTTA 57.931 47.619 0.00 0.00 0.00 2.24
361 7510 1.986378 GCTAAGTGTGCAGTACGTGAG 59.014 52.381 0.00 0.00 0.00 3.51
376 7528 4.280461 CGTATTCTCCTGTACACGCTAAG 58.720 47.826 0.00 0.00 0.00 2.18
379 7531 2.846039 CGTATTCTCCTGTACACGCT 57.154 50.000 0.00 0.00 0.00 5.07
384 7536 4.797349 GTGTACAAGCGTATTCTCCTGTAC 59.203 45.833 0.00 0.00 33.61 2.90
388 7540 4.530710 TTGTGTACAAGCGTATTCTCCT 57.469 40.909 0.00 0.00 0.00 3.69
389 7541 5.600908 TTTTGTGTACAAGCGTATTCTCC 57.399 39.130 0.00 0.00 37.15 3.71
390 7542 7.960793 AGTATTTTGTGTACAAGCGTATTCTC 58.039 34.615 0.00 0.00 37.15 2.87
391 7543 7.900782 AGTATTTTGTGTACAAGCGTATTCT 57.099 32.000 0.00 0.00 37.15 2.40
431 7585 3.049912 TGATGACGTGCACGCTATATTC 58.950 45.455 37.35 25.65 44.43 1.75
463 7617 8.230486 CGTGCATGTCTCTTTCTTTTTATTACT 58.770 33.333 0.00 0.00 0.00 2.24
464 7618 7.007456 GCGTGCATGTCTCTTTCTTTTTATTAC 59.993 37.037 7.93 0.00 0.00 1.89
488 7642 5.165911 TCTTTAGTTATACTCACCTCGCG 57.834 43.478 0.00 0.00 0.00 5.87
494 7648 6.816640 TGGCACACATCTTTAGTTATACTCAC 59.183 38.462 0.00 0.00 0.00 3.51
548 7711 4.695455 ACTATCCATGAAAAACTGTCACGG 59.305 41.667 0.00 0.00 29.42 4.94
587 7750 3.732219 CACGTTAACTGACGCTAGAAACA 59.268 43.478 3.71 0.00 46.47 2.83
592 7755 2.924903 TGTCACGTTAACTGACGCTAG 58.075 47.619 22.14 3.53 46.47 3.42
593 7756 3.302555 CTTGTCACGTTAACTGACGCTA 58.697 45.455 22.14 14.31 46.47 4.26
595 7758 1.396815 GCTTGTCACGTTAACTGACGC 60.397 52.381 22.14 18.56 46.47 5.19
680 7843 7.104043 AGTTTGTTAGGCGATGTACTATGTA 57.896 36.000 0.00 0.00 0.00 2.29
681 7844 5.974108 AGTTTGTTAGGCGATGTACTATGT 58.026 37.500 0.00 0.00 0.00 2.29
682 7845 5.462398 GGAGTTTGTTAGGCGATGTACTATG 59.538 44.000 0.00 0.00 0.00 2.23
683 7846 5.128171 TGGAGTTTGTTAGGCGATGTACTAT 59.872 40.000 0.00 0.00 0.00 2.12
684 7847 4.463539 TGGAGTTTGTTAGGCGATGTACTA 59.536 41.667 0.00 0.00 0.00 1.82
685 7848 3.259876 TGGAGTTTGTTAGGCGATGTACT 59.740 43.478 0.00 0.00 0.00 2.73
686 7849 3.370061 GTGGAGTTTGTTAGGCGATGTAC 59.630 47.826 0.00 0.00 0.00 2.90
687 7850 3.592059 GTGGAGTTTGTTAGGCGATGTA 58.408 45.455 0.00 0.00 0.00 2.29
688 7851 2.423577 GTGGAGTTTGTTAGGCGATGT 58.576 47.619 0.00 0.00 0.00 3.06
689 7852 1.737793 GGTGGAGTTTGTTAGGCGATG 59.262 52.381 0.00 0.00 0.00 3.84
690 7853 1.349688 TGGTGGAGTTTGTTAGGCGAT 59.650 47.619 0.00 0.00 0.00 4.58
691 7854 0.759959 TGGTGGAGTTTGTTAGGCGA 59.240 50.000 0.00 0.00 0.00 5.54
692 7855 1.265905 GTTGGTGGAGTTTGTTAGGCG 59.734 52.381 0.00 0.00 0.00 5.52
693 7856 1.611977 GGTTGGTGGAGTTTGTTAGGC 59.388 52.381 0.00 0.00 0.00 3.93
746 7909 3.028130 GTGTAAGCTAGAAGAGGAGGCT 58.972 50.000 0.00 0.00 34.52 4.58
759 7922 6.375455 CCTTAATGACCAATCAAGTGTAAGCT 59.625 38.462 0.00 0.00 38.69 3.74
760 7923 6.404734 CCCTTAATGACCAATCAAGTGTAAGC 60.405 42.308 0.00 0.00 38.69 3.09
761 7924 6.659242 ACCCTTAATGACCAATCAAGTGTAAG 59.341 38.462 0.00 0.00 38.69 2.34
784 8783 3.701542 TCAGGTCTCATGTGATCAGTACC 59.298 47.826 10.49 2.42 0.00 3.34
803 8802 1.468985 ACGATGGGTCTCTCTGTCAG 58.531 55.000 0.00 0.00 0.00 3.51
811 8810 2.158959 CGCGTGAACGATGGGTCTC 61.159 63.158 7.10 0.00 43.02 3.36
842 8841 3.389329 AGATGTGATGGCAGTAGGTTAGG 59.611 47.826 0.00 0.00 0.00 2.69
843 8842 4.679373 AGATGTGATGGCAGTAGGTTAG 57.321 45.455 0.00 0.00 0.00 2.34
844 8843 7.849322 TTATAGATGTGATGGCAGTAGGTTA 57.151 36.000 0.00 0.00 0.00 2.85
849 8848 8.094548 GTGGTATTTATAGATGTGATGGCAGTA 58.905 37.037 0.00 0.00 0.00 2.74
853 8852 6.476378 AGGTGGTATTTATAGATGTGATGGC 58.524 40.000 0.00 0.00 0.00 4.40
878 8877 1.463214 TGAAGAGGGGGTGCTTGGA 60.463 57.895 0.00 0.00 0.00 3.53
911 8910 4.345257 AGCTGTGGGTAGTTATAGATGTGG 59.655 45.833 0.00 0.00 0.00 4.17
913 8912 5.069251 GTGAGCTGTGGGTAGTTATAGATGT 59.931 44.000 0.00 0.00 0.00 3.06
915 8914 5.459505 AGTGAGCTGTGGGTAGTTATAGAT 58.540 41.667 0.00 0.00 0.00 1.98
916 8915 4.868268 AGTGAGCTGTGGGTAGTTATAGA 58.132 43.478 0.00 0.00 0.00 1.98
917 8916 6.062749 TCTAGTGAGCTGTGGGTAGTTATAG 58.937 44.000 0.00 0.00 0.00 1.31
928 8951 3.063670 CTCGTGATCTAGTGAGCTGTG 57.936 52.381 0.00 0.00 0.00 3.66
933 8956 2.661504 CTCGCTCGTGATCTAGTGAG 57.338 55.000 14.92 14.92 42.19 3.51
934 8957 0.658368 GCTCGCTCGTGATCTAGTGA 59.342 55.000 0.00 0.68 0.00 3.41
935 8958 0.317436 GGCTCGCTCGTGATCTAGTG 60.317 60.000 0.00 0.00 0.00 2.74
937 8960 0.040514 CTGGCTCGCTCGTGATCTAG 60.041 60.000 0.00 0.00 0.00 2.43
938 8961 1.448119 CCTGGCTCGCTCGTGATCTA 61.448 60.000 0.00 0.00 0.00 1.98
939 8962 2.780094 CCTGGCTCGCTCGTGATCT 61.780 63.158 0.00 0.00 0.00 2.75
940 8963 2.279120 CCTGGCTCGCTCGTGATC 60.279 66.667 0.00 0.00 0.00 2.92
941 8964 3.069980 GACCTGGCTCGCTCGTGAT 62.070 63.158 0.00 0.00 0.00 3.06
942 8965 3.749064 GACCTGGCTCGCTCGTGA 61.749 66.667 0.00 0.00 0.00 4.35
943 8966 4.803426 GGACCTGGCTCGCTCGTG 62.803 72.222 0.00 0.00 0.00 4.35
945 8968 3.997064 CTTGGACCTGGCTCGCTCG 62.997 68.421 0.00 0.00 0.00 5.03
946 8969 2.125350 CTTGGACCTGGCTCGCTC 60.125 66.667 0.00 0.00 0.00 5.03
947 8970 3.710722 CCTTGGACCTGGCTCGCT 61.711 66.667 0.00 0.00 0.00 4.93
948 8971 3.706373 TCCTTGGACCTGGCTCGC 61.706 66.667 0.00 0.00 0.00 5.03
956 8979 1.984020 GTCCCTCTGTCCTTGGACC 59.016 63.158 16.23 0.65 41.14 4.46
967 8990 2.583566 AGTAGAGCTAGTTGGTCCCTCT 59.416 50.000 0.00 0.00 43.71 3.69
968 8991 2.691011 CAGTAGAGCTAGTTGGTCCCTC 59.309 54.545 0.00 0.00 43.71 4.30
971 8994 2.100087 GAGCAGTAGAGCTAGTTGGTCC 59.900 54.545 0.00 0.00 46.75 4.46
972 8995 2.223386 CGAGCAGTAGAGCTAGTTGGTC 60.223 54.545 0.00 0.00 46.75 4.02
973 8996 1.746220 CGAGCAGTAGAGCTAGTTGGT 59.254 52.381 0.00 0.00 46.75 3.67
974 8997 2.017782 TCGAGCAGTAGAGCTAGTTGG 58.982 52.381 0.00 0.00 46.75 3.77
976 8999 2.546368 CGATCGAGCAGTAGAGCTAGTT 59.454 50.000 10.26 0.00 46.75 2.24
978 9001 1.463056 CCGATCGAGCAGTAGAGCTAG 59.537 57.143 18.66 0.00 46.75 3.42
979 9002 1.514003 CCGATCGAGCAGTAGAGCTA 58.486 55.000 18.66 0.00 46.75 3.32
981 9004 1.371145 GCCGATCGAGCAGTAGAGC 60.371 63.158 18.66 3.88 0.00 4.09
984 9007 0.665670 CCATGCCGATCGAGCAGTAG 60.666 60.000 27.05 20.60 44.90 2.57
985 9008 1.363807 CCATGCCGATCGAGCAGTA 59.636 57.895 27.05 9.30 44.90 2.74
986 9009 2.107750 CCATGCCGATCGAGCAGT 59.892 61.111 27.05 16.81 44.90 4.40
987 9010 3.344215 GCCATGCCGATCGAGCAG 61.344 66.667 27.05 18.99 44.90 4.24
988 9011 4.916293 GGCCATGCCGATCGAGCA 62.916 66.667 26.03 26.03 45.94 4.26
998 9021 2.030958 GCACAAAGCTTGGCCATGC 61.031 57.895 31.02 31.02 41.15 4.06
1080 9109 2.606213 TGGAGCATGTCGGGGTCA 60.606 61.111 0.00 0.00 34.56 4.02
1626 9920 0.737715 GGCTGTCGAACGCTGAGATT 60.738 55.000 7.08 0.00 0.00 2.40
1862 10158 1.343465 GGGACATATAGGACCGTGTGG 59.657 57.143 0.00 0.00 42.84 4.17
1863 10159 1.343465 GGGGACATATAGGACCGTGTG 59.657 57.143 0.00 0.00 0.00 3.82
1864 10160 1.219724 AGGGGACATATAGGACCGTGT 59.780 52.381 0.00 0.00 0.00 4.49
1865 10161 1.893801 GAGGGGACATATAGGACCGTG 59.106 57.143 0.00 0.00 0.00 4.94
1866 10162 1.502039 TGAGGGGACATATAGGACCGT 59.498 52.381 0.00 0.00 0.00 4.83
1867 10163 2.304221 TGAGGGGACATATAGGACCG 57.696 55.000 0.00 0.00 0.00 4.79
1868 10164 4.949121 AGTATGAGGGGACATATAGGACC 58.051 47.826 0.00 0.00 35.61 4.46
1869 10165 8.478877 CAATAAGTATGAGGGGACATATAGGAC 58.521 40.741 0.00 0.00 35.61 3.85
1881 10293 9.319143 CTAAAAGACAGACAATAAGTATGAGGG 57.681 37.037 0.00 0.00 41.98 4.30
1882 10294 9.319143 CCTAAAAGACAGACAATAAGTATGAGG 57.681 37.037 0.00 0.00 41.98 3.86
1888 10300 8.974060 TTTCACCTAAAAGACAGACAATAAGT 57.026 30.769 0.00 0.00 0.00 2.24
1889 10301 9.831737 CATTTCACCTAAAAGACAGACAATAAG 57.168 33.333 0.00 0.00 0.00 1.73
1890 10302 9.567776 TCATTTCACCTAAAAGACAGACAATAA 57.432 29.630 0.00 0.00 0.00 1.40
1891 10303 9.567776 TTCATTTCACCTAAAAGACAGACAATA 57.432 29.630 0.00 0.00 0.00 1.90
1892 10304 8.463930 TTCATTTCACCTAAAAGACAGACAAT 57.536 30.769 0.00 0.00 0.00 2.71
1893 10305 7.873719 TTCATTTCACCTAAAAGACAGACAA 57.126 32.000 0.00 0.00 0.00 3.18
1894 10306 7.873719 TTTCATTTCACCTAAAAGACAGACA 57.126 32.000 0.00 0.00 0.00 3.41
1900 10312 6.038825 TGACGCTTTTCATTTCACCTAAAAGA 59.961 34.615 9.84 0.00 39.97 2.52
1909 10321 7.651304 ACAAATAACATGACGCTTTTCATTTCA 59.349 29.630 0.00 0.00 33.74 2.69
1910 10322 8.006741 ACAAATAACATGACGCTTTTCATTTC 57.993 30.769 0.00 0.00 33.74 2.17
1911 10323 7.945033 ACAAATAACATGACGCTTTTCATTT 57.055 28.000 0.00 0.00 33.74 2.32
1912 10324 7.148983 CGAACAAATAACATGACGCTTTTCATT 60.149 33.333 0.00 0.00 33.74 2.57
1913 10325 6.305399 CGAACAAATAACATGACGCTTTTCAT 59.695 34.615 0.00 0.00 36.62 2.57
1925 10337 5.914635 CAGCTCAACAACGAACAAATAACAT 59.085 36.000 0.00 0.00 0.00 2.71
1956 10368 4.795278 GTCGTACGAAAAACCATCGATACT 59.205 41.667 21.39 0.00 42.76 2.12
2046 10458 0.978151 TAAAGCAGGCCGAGTTACCA 59.022 50.000 0.00 0.00 0.00 3.25
2050 10462 1.880027 CAAAGTAAAGCAGGCCGAGTT 59.120 47.619 0.00 0.00 0.00 3.01
2104 10547 4.223953 CTCCCCACTATGACTAGCCTAAA 58.776 47.826 0.00 0.00 0.00 1.85
2109 10552 4.216708 AGTTACTCCCCACTATGACTAGC 58.783 47.826 0.00 0.00 0.00 3.42
2110 10553 7.229106 GTCTAAGTTACTCCCCACTATGACTAG 59.771 44.444 0.00 0.00 0.00 2.57
2111 10554 7.059156 GTCTAAGTTACTCCCCACTATGACTA 58.941 42.308 0.00 0.00 0.00 2.59
2113 10556 5.892686 AGTCTAAGTTACTCCCCACTATGAC 59.107 44.000 0.00 0.00 0.00 3.06
2114 10557 6.088541 AGTCTAAGTTACTCCCCACTATGA 57.911 41.667 0.00 0.00 0.00 2.15
2115 10558 7.013464 CACTAGTCTAAGTTACTCCCCACTATG 59.987 44.444 0.00 0.00 0.00 2.23
2118 10561 5.222296 ACACTAGTCTAAGTTACTCCCCACT 60.222 44.000 0.00 0.00 0.00 4.00
2119 10562 5.015515 ACACTAGTCTAAGTTACTCCCCAC 58.984 45.833 0.00 0.00 0.00 4.61
2120 10563 5.222192 TGACACTAGTCTAAGTTACTCCCCA 60.222 44.000 0.00 0.00 45.20 4.96
2122 10565 6.680872 GCATGACACTAGTCTAAGTTACTCCC 60.681 46.154 0.00 0.00 45.20 4.30
2124 10567 6.853720 TGCATGACACTAGTCTAAGTTACTC 58.146 40.000 0.00 0.00 45.20 2.59
2126 10569 9.186323 CATATGCATGACACTAGTCTAAGTTAC 57.814 37.037 10.16 0.00 45.20 2.50
2127 10570 9.131791 TCATATGCATGACACTAGTCTAAGTTA 57.868 33.333 10.16 0.00 45.20 2.24
2128 10571 8.011844 TCATATGCATGACACTAGTCTAAGTT 57.988 34.615 10.16 0.00 45.20 2.66
2144 10587 8.260818 AGTAACAAAGACTAGTGTCATATGCAT 58.739 33.333 3.79 3.79 45.20 3.96
2146 10589 9.021863 GTAGTAACAAAGACTAGTGTCATATGC 57.978 37.037 0.00 0.00 45.20 3.14
2149 10592 8.954350 GGAGTAGTAACAAAGACTAGTGTCATA 58.046 37.037 0.00 0.00 45.20 2.15
2150 10593 7.093858 GGGAGTAGTAACAAAGACTAGTGTCAT 60.094 40.741 0.00 0.00 45.20 3.06
2151 10594 6.208204 GGGAGTAGTAACAAAGACTAGTGTCA 59.792 42.308 0.00 0.00 45.20 3.58
2153 10596 6.313324 AGGGAGTAGTAACAAAGACTAGTGT 58.687 40.000 0.00 0.00 33.99 3.55
2155 10598 5.951148 GGAGGGAGTAGTAACAAAGACTAGT 59.049 44.000 0.00 0.00 36.06 2.57
2157 10600 4.946157 CGGAGGGAGTAGTAACAAAGACTA 59.054 45.833 0.00 0.00 0.00 2.59
2158 10601 3.762823 CGGAGGGAGTAGTAACAAAGACT 59.237 47.826 0.00 0.00 0.00 3.24
2159 10602 3.509184 ACGGAGGGAGTAGTAACAAAGAC 59.491 47.826 0.00 0.00 0.00 3.01
2160 10603 3.760684 GACGGAGGGAGTAGTAACAAAGA 59.239 47.826 0.00 0.00 0.00 2.52
2162 10605 2.827921 GGACGGAGGGAGTAGTAACAAA 59.172 50.000 0.00 0.00 0.00 2.83
2163 10606 2.450476 GGACGGAGGGAGTAGTAACAA 58.550 52.381 0.00 0.00 0.00 2.83
2165 10608 1.020437 CGGACGGAGGGAGTAGTAAC 58.980 60.000 0.00 0.00 0.00 2.50
2166 10609 0.107017 CCGGACGGAGGGAGTAGTAA 60.107 60.000 4.40 0.00 37.50 2.24
2167 10610 0.982852 TCCGGACGGAGGGAGTAGTA 60.983 60.000 9.76 0.00 39.76 1.82
2168 10611 1.856539 TTCCGGACGGAGGGAGTAGT 61.857 60.000 13.64 0.00 46.06 2.73
2169 10612 0.682209 TTTCCGGACGGAGGGAGTAG 60.682 60.000 13.64 0.00 46.06 2.57
2170 10613 0.032813 ATTTCCGGACGGAGGGAGTA 60.033 55.000 13.64 0.00 46.06 2.59
2171 10614 0.032813 TATTTCCGGACGGAGGGAGT 60.033 55.000 13.64 0.00 46.06 3.85
2172 10615 0.388294 GTATTTCCGGACGGAGGGAG 59.612 60.000 13.64 0.00 46.06 4.30
2173 10616 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20
2174 10617 0.828677 AAGTATTTCCGGACGGAGGG 59.171 55.000 13.64 0.00 46.06 4.30
2175 10618 1.206371 ACAAGTATTTCCGGACGGAGG 59.794 52.381 13.64 0.00 46.06 4.30
2176 10619 2.094390 TGACAAGTATTTCCGGACGGAG 60.094 50.000 13.64 3.15 46.06 4.63
2177 10620 1.894466 TGACAAGTATTTCCGGACGGA 59.106 47.619 1.83 9.76 43.52 4.69
2179 10622 3.517602 TGATGACAAGTATTTCCGGACG 58.482 45.455 1.83 0.00 0.00 4.79
2180 10623 5.873179 TTTGATGACAAGTATTTCCGGAC 57.127 39.130 1.83 0.00 37.32 4.79
2181 10624 6.127758 CCATTTTGATGACAAGTATTTCCGGA 60.128 38.462 0.00 0.00 37.32 5.14
2183 10626 6.851609 TCCATTTTGATGACAAGTATTTCCG 58.148 36.000 0.00 0.00 37.32 4.30
2236 11425 8.147058 GTCAGTGAAATGGATGTATCTAGATGT 58.853 37.037 15.79 1.25 0.00 3.06
2237 11426 8.146412 TGTCAGTGAAATGGATGTATCTAGATG 58.854 37.037 15.79 0.00 0.00 2.90
2239 11428 7.660030 TGTCAGTGAAATGGATGTATCTAGA 57.340 36.000 0.00 0.00 0.00 2.43
2240 11429 7.984050 ACTTGTCAGTGAAATGGATGTATCTAG 59.016 37.037 0.00 0.00 0.00 2.43
2241 11430 7.851228 ACTTGTCAGTGAAATGGATGTATCTA 58.149 34.615 0.00 0.00 0.00 1.98
2243 11432 6.992063 ACTTGTCAGTGAAATGGATGTATC 57.008 37.500 0.00 0.00 0.00 2.24
2244 11433 9.466497 AAATACTTGTCAGTGAAATGGATGTAT 57.534 29.630 0.00 0.00 34.06 2.29
2245 11434 8.862325 AAATACTTGTCAGTGAAATGGATGTA 57.138 30.769 0.00 0.00 34.06 2.29
2247 11436 7.253422 GGAAATACTTGTCAGTGAAATGGATG 58.747 38.462 0.00 0.00 34.06 3.51
2248 11437 6.094048 CGGAAATACTTGTCAGTGAAATGGAT 59.906 38.462 0.00 0.00 34.06 3.41
2249 11438 5.411361 CGGAAATACTTGTCAGTGAAATGGA 59.589 40.000 0.00 0.00 34.06 3.41
2250 11439 5.391950 CCGGAAATACTTGTCAGTGAAATGG 60.392 44.000 0.00 0.00 34.06 3.16
2251 11440 5.411361 TCCGGAAATACTTGTCAGTGAAATG 59.589 40.000 0.00 0.00 34.06 2.32
2254 11443 4.312443 GTCCGGAAATACTTGTCAGTGAA 58.688 43.478 5.23 0.00 34.06 3.18
2255 11444 3.613193 CGTCCGGAAATACTTGTCAGTGA 60.613 47.826 5.23 0.00 34.06 3.41
2256 11445 2.666508 CGTCCGGAAATACTTGTCAGTG 59.333 50.000 5.23 0.00 34.06 3.66
2257 11446 2.353406 CCGTCCGGAAATACTTGTCAGT 60.353 50.000 5.23 0.00 37.50 3.41
2258 11447 2.094390 TCCGTCCGGAAATACTTGTCAG 60.094 50.000 5.23 0.00 42.05 3.51
2259 11448 1.894466 TCCGTCCGGAAATACTTGTCA 59.106 47.619 5.23 0.00 42.05 3.58
2260 11449 2.537401 CTCCGTCCGGAAATACTTGTC 58.463 52.381 5.23 0.00 44.66 3.18
2262 11451 1.472728 CCCTCCGTCCGGAAATACTTG 60.473 57.143 5.23 0.00 44.66 3.16
2263 11452 0.828677 CCCTCCGTCCGGAAATACTT 59.171 55.000 5.23 0.00 44.66 2.24
2265 11454 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
2267 11456 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
2268 11457 0.967380 GTACTCCCTCCGTCCGGAAA 60.967 60.000 5.23 0.00 44.66 3.13
2269 11458 1.379044 GTACTCCCTCCGTCCGGAA 60.379 63.158 5.23 0.00 44.66 4.30
2270 11459 2.273449 GTACTCCCTCCGTCCGGA 59.727 66.667 0.00 0.00 42.90 5.14
2271 11460 2.832201 GGTACTCCCTCCGTCCGG 60.832 72.222 0.00 0.00 0.00 5.14
2272 11461 1.379576 AAGGTACTCCCTCCGTCCG 60.380 63.158 0.00 0.00 45.47 4.79
2273 11462 0.324091 TGAAGGTACTCCCTCCGTCC 60.324 60.000 0.00 0.00 45.47 4.79
2274 11463 1.777941 ATGAAGGTACTCCCTCCGTC 58.222 55.000 0.00 0.00 45.47 4.79
2275 11464 2.244252 ACTATGAAGGTACTCCCTCCGT 59.756 50.000 0.00 0.00 45.47 4.69
2276 11465 2.623889 CACTATGAAGGTACTCCCTCCG 59.376 54.545 0.00 0.00 45.47 4.63
2277 11466 2.365941 GCACTATGAAGGTACTCCCTCC 59.634 54.545 0.00 0.00 45.47 4.30
2278 11467 3.031736 TGCACTATGAAGGTACTCCCTC 58.968 50.000 0.00 0.00 45.47 4.30
2280 11469 3.906720 TTGCACTATGAAGGTACTCCC 57.093 47.619 0.00 0.00 38.49 4.30
2281 11470 4.833390 ACTTTGCACTATGAAGGTACTCC 58.167 43.478 0.00 0.00 38.49 3.85
2282 11471 6.872020 TGTTACTTTGCACTATGAAGGTACTC 59.128 38.462 0.00 0.00 38.49 2.59
2286 11475 7.165485 TGTATGTTACTTTGCACTATGAAGGT 58.835 34.615 0.00 0.00 0.00 3.50
2287 11476 7.609760 TGTATGTTACTTTGCACTATGAAGG 57.390 36.000 0.00 0.00 0.00 3.46
2288 11477 8.721478 ACTTGTATGTTACTTTGCACTATGAAG 58.279 33.333 0.00 0.00 0.00 3.02
2289 11478 8.615878 ACTTGTATGTTACTTTGCACTATGAA 57.384 30.769 0.00 0.00 0.00 2.57
2290 11479 9.366216 CTACTTGTATGTTACTTTGCACTATGA 57.634 33.333 0.00 0.00 0.00 2.15
2291 11480 9.151471 ACTACTTGTATGTTACTTTGCACTATG 57.849 33.333 0.00 0.00 0.00 2.23
2294 11483 9.367444 GATACTACTTGTATGTTACTTTGCACT 57.633 33.333 0.00 0.00 41.55 4.40
2295 11484 9.146984 TGATACTACTTGTATGTTACTTTGCAC 57.853 33.333 0.00 0.00 41.55 4.57
2296 11485 9.884636 ATGATACTACTTGTATGTTACTTTGCA 57.115 29.630 0.00 0.00 41.55 4.08
2345 11534 7.336931 ACGCAATCCAAAGTAAAATGAGTCTAT 59.663 33.333 0.00 0.00 0.00 1.98
2346 11535 6.653320 ACGCAATCCAAAGTAAAATGAGTCTA 59.347 34.615 0.00 0.00 0.00 2.59
2347 11536 5.473504 ACGCAATCCAAAGTAAAATGAGTCT 59.526 36.000 0.00 0.00 0.00 3.24
2351 11540 7.598278 ACATAACGCAATCCAAAGTAAAATGA 58.402 30.769 0.00 0.00 0.00 2.57
2352 11541 7.810766 ACATAACGCAATCCAAAGTAAAATG 57.189 32.000 0.00 0.00 0.00 2.32
2355 11544 7.872881 TGTAACATAACGCAATCCAAAGTAAA 58.127 30.769 0.00 0.00 0.00 2.01
2356 11545 7.173562 ACTGTAACATAACGCAATCCAAAGTAA 59.826 33.333 0.00 0.00 0.00 2.24
2357 11546 6.651643 ACTGTAACATAACGCAATCCAAAGTA 59.348 34.615 0.00 0.00 0.00 2.24
2358 11547 5.472137 ACTGTAACATAACGCAATCCAAAGT 59.528 36.000 0.00 0.00 0.00 2.66
2360 11549 5.950758 ACTGTAACATAACGCAATCCAAA 57.049 34.783 0.00 0.00 0.00 3.28
2361 11550 6.427242 TGTTACTGTAACATAACGCAATCCAA 59.573 34.615 25.14 2.12 43.23 3.53
2388 11577 9.178758 GGAAAGAGATGTTTGGAGTAACATAAT 57.821 33.333 2.29 0.00 45.98 1.28
2389 11578 8.383175 AGGAAAGAGATGTTTGGAGTAACATAA 58.617 33.333 2.29 0.00 45.98 1.90
2390 11579 7.918076 AGGAAAGAGATGTTTGGAGTAACATA 58.082 34.615 2.29 0.00 45.98 2.29
2392 11581 6.183361 TGAGGAAAGAGATGTTTGGAGTAACA 60.183 38.462 0.00 0.00 41.81 2.41
2394 11583 6.433847 TGAGGAAAGAGATGTTTGGAGTAA 57.566 37.500 0.00 0.00 0.00 2.24
2396 11585 4.982241 TGAGGAAAGAGATGTTTGGAGT 57.018 40.909 0.00 0.00 0.00 3.85
2397 11586 7.609532 AGTTAATGAGGAAAGAGATGTTTGGAG 59.390 37.037 0.00 0.00 0.00 3.86
2398 11587 7.461749 AGTTAATGAGGAAAGAGATGTTTGGA 58.538 34.615 0.00 0.00 0.00 3.53
2399 11588 7.609532 AGAGTTAATGAGGAAAGAGATGTTTGG 59.390 37.037 0.00 0.00 0.00 3.28
2400 11589 8.558973 AGAGTTAATGAGGAAAGAGATGTTTG 57.441 34.615 0.00 0.00 0.00 2.93
2402 11591 9.829507 CATAGAGTTAATGAGGAAAGAGATGTT 57.170 33.333 0.00 0.00 0.00 2.71
2403 11592 7.930865 GCATAGAGTTAATGAGGAAAGAGATGT 59.069 37.037 0.00 0.00 0.00 3.06
2405 11594 7.071698 TGGCATAGAGTTAATGAGGAAAGAGAT 59.928 37.037 0.00 0.00 0.00 2.75
2407 11596 6.481644 GTGGCATAGAGTTAATGAGGAAAGAG 59.518 42.308 0.00 0.00 0.00 2.85
2408 11597 6.070251 TGTGGCATAGAGTTAATGAGGAAAGA 60.070 38.462 0.00 0.00 0.00 2.52
2410 11599 6.061022 TGTGGCATAGAGTTAATGAGGAAA 57.939 37.500 0.00 0.00 0.00 3.13
2411 11600 5.692115 TGTGGCATAGAGTTAATGAGGAA 57.308 39.130 0.00 0.00 0.00 3.36
2412 11601 5.894298 ATGTGGCATAGAGTTAATGAGGA 57.106 39.130 0.00 0.00 0.00 3.71
2413 11602 6.148480 GCTTATGTGGCATAGAGTTAATGAGG 59.852 42.308 0.00 0.00 0.00 3.86
2414 11603 6.707608 TGCTTATGTGGCATAGAGTTAATGAG 59.292 38.462 0.00 0.00 34.56 2.90
2415 11604 6.591001 TGCTTATGTGGCATAGAGTTAATGA 58.409 36.000 0.00 0.00 34.56 2.57
2416 11605 6.866010 TGCTTATGTGGCATAGAGTTAATG 57.134 37.500 0.00 0.00 34.56 1.90
2418 11607 6.094881 GGTTTGCTTATGTGGCATAGAGTTAA 59.905 38.462 0.00 0.00 39.54 2.01
2420 11609 4.399303 GGTTTGCTTATGTGGCATAGAGTT 59.601 41.667 0.00 0.00 39.54 3.01
2421 11610 3.947834 GGTTTGCTTATGTGGCATAGAGT 59.052 43.478 0.00 0.00 39.54 3.24
2422 11611 4.036027 CAGGTTTGCTTATGTGGCATAGAG 59.964 45.833 0.00 0.00 39.54 2.43
2424 11613 3.696051 ACAGGTTTGCTTATGTGGCATAG 59.304 43.478 0.00 0.00 39.54 2.23
2425 11614 3.694072 GACAGGTTTGCTTATGTGGCATA 59.306 43.478 0.00 0.00 39.54 3.14
2426 11615 2.493278 GACAGGTTTGCTTATGTGGCAT 59.507 45.455 0.00 0.00 39.54 4.40
2428 11617 2.162681 AGACAGGTTTGCTTATGTGGC 58.837 47.619 0.00 0.00 0.00 5.01
2429 11618 3.820467 TCAAGACAGGTTTGCTTATGTGG 59.180 43.478 0.00 0.00 0.00 4.17
2430 11619 5.437289 TTCAAGACAGGTTTGCTTATGTG 57.563 39.130 0.00 0.00 0.00 3.21
2431 11620 6.655078 ATTTCAAGACAGGTTTGCTTATGT 57.345 33.333 0.00 0.00 0.00 2.29
2432 11621 6.742718 CGTATTTCAAGACAGGTTTGCTTATG 59.257 38.462 0.00 0.00 0.00 1.90
2433 11622 6.622896 GCGTATTTCAAGACAGGTTTGCTTAT 60.623 38.462 0.00 0.00 0.00 1.73
2435 11624 4.556699 GCGTATTTCAAGACAGGTTTGCTT 60.557 41.667 0.00 0.00 0.00 3.91
2436 11625 3.058224 GCGTATTTCAAGACAGGTTTGCT 60.058 43.478 0.00 0.00 0.00 3.91
2438 11627 4.749245 AGCGTATTTCAAGACAGGTTTG 57.251 40.909 0.00 0.00 0.00 2.93
2442 11631 6.812160 AGTAACTTAGCGTATTTCAAGACAGG 59.188 38.462 0.00 0.00 0.00 4.00
2443 11632 7.009357 GGAGTAACTTAGCGTATTTCAAGACAG 59.991 40.741 0.00 0.00 0.00 3.51
2444 11633 6.810182 GGAGTAACTTAGCGTATTTCAAGACA 59.190 38.462 0.00 0.00 0.00 3.41
2445 11634 6.255237 GGGAGTAACTTAGCGTATTTCAAGAC 59.745 42.308 0.00 0.00 0.00 3.01
2446 11635 6.071221 TGGGAGTAACTTAGCGTATTTCAAGA 60.071 38.462 0.00 0.00 0.00 3.02
2447 11636 6.035758 GTGGGAGTAACTTAGCGTATTTCAAG 59.964 42.308 0.00 0.00 0.00 3.02
2448 11637 5.870978 GTGGGAGTAACTTAGCGTATTTCAA 59.129 40.000 0.00 0.00 0.00 2.69
2449 11638 5.186409 AGTGGGAGTAACTTAGCGTATTTCA 59.814 40.000 0.00 0.00 0.00 2.69
2450 11639 5.658468 AGTGGGAGTAACTTAGCGTATTTC 58.342 41.667 0.00 0.00 0.00 2.17
2451 11640 5.672421 AGTGGGAGTAACTTAGCGTATTT 57.328 39.130 0.00 0.00 0.00 1.40
2452 11641 6.548622 TCATAGTGGGAGTAACTTAGCGTATT 59.451 38.462 0.00 0.00 0.00 1.89
2453 11642 6.016443 GTCATAGTGGGAGTAACTTAGCGTAT 60.016 42.308 0.00 0.00 0.00 3.06
2454 11643 5.297776 GTCATAGTGGGAGTAACTTAGCGTA 59.702 44.000 0.00 0.00 0.00 4.42
2455 11644 4.097589 GTCATAGTGGGAGTAACTTAGCGT 59.902 45.833 0.00 0.00 0.00 5.07
2456 11645 4.499357 GGTCATAGTGGGAGTAACTTAGCG 60.499 50.000 0.00 0.00 0.00 4.26
2457 11646 4.404715 TGGTCATAGTGGGAGTAACTTAGC 59.595 45.833 0.00 0.00 0.00 3.09
2458 11647 5.452077 GCTGGTCATAGTGGGAGTAACTTAG 60.452 48.000 0.00 0.00 0.00 2.18
2459 11648 4.404715 GCTGGTCATAGTGGGAGTAACTTA 59.595 45.833 0.00 0.00 0.00 2.24
2460 11649 3.197983 GCTGGTCATAGTGGGAGTAACTT 59.802 47.826 0.00 0.00 0.00 2.66
2461 11650 2.766828 GCTGGTCATAGTGGGAGTAACT 59.233 50.000 0.00 0.00 0.00 2.24
2462 11651 2.158943 GGCTGGTCATAGTGGGAGTAAC 60.159 54.545 0.00 0.00 0.00 2.50
2463 11652 2.116238 GGCTGGTCATAGTGGGAGTAA 58.884 52.381 0.00 0.00 0.00 2.24
2464 11653 1.291033 AGGCTGGTCATAGTGGGAGTA 59.709 52.381 0.00 0.00 0.00 2.59
2465 11654 0.043334 AGGCTGGTCATAGTGGGAGT 59.957 55.000 0.00 0.00 0.00 3.85
2466 11655 1.207791 AAGGCTGGTCATAGTGGGAG 58.792 55.000 0.00 0.00 0.00 4.30
2467 11656 2.023404 TCTAAGGCTGGTCATAGTGGGA 60.023 50.000 0.00 0.00 0.00 4.37
2468 11657 2.366916 CTCTAAGGCTGGTCATAGTGGG 59.633 54.545 0.00 0.00 0.00 4.61
2469 11658 3.068873 GTCTCTAAGGCTGGTCATAGTGG 59.931 52.174 0.00 0.00 0.00 4.00
2470 11659 3.701542 TGTCTCTAAGGCTGGTCATAGTG 59.298 47.826 0.00 0.00 0.00 2.74
2471 11660 3.982516 TGTCTCTAAGGCTGGTCATAGT 58.017 45.455 0.00 0.00 0.00 2.12
2472 11661 4.202202 CCTTGTCTCTAAGGCTGGTCATAG 60.202 50.000 0.00 0.00 40.67 2.23
2473 11662 3.706594 CCTTGTCTCTAAGGCTGGTCATA 59.293 47.826 0.00 0.00 40.67 2.15
2474 11663 2.503356 CCTTGTCTCTAAGGCTGGTCAT 59.497 50.000 0.00 0.00 40.67 3.06
2475 11664 1.902508 CCTTGTCTCTAAGGCTGGTCA 59.097 52.381 0.00 0.00 40.67 4.02
2476 11665 2.682155 CCTTGTCTCTAAGGCTGGTC 57.318 55.000 0.00 0.00 40.67 4.02
2490 11679 1.367840 GACTCGGCAGACACCTTGT 59.632 57.895 0.00 0.00 0.00 3.16
2491 11680 1.374758 GGACTCGGCAGACACCTTG 60.375 63.158 0.00 0.00 0.00 3.61
2492 11681 2.932234 CGGACTCGGCAGACACCTT 61.932 63.158 0.00 0.00 0.00 3.50
2493 11682 3.374402 CGGACTCGGCAGACACCT 61.374 66.667 0.00 0.00 0.00 4.00
2494 11683 3.343788 CTCGGACTCGGCAGACACC 62.344 68.421 0.00 0.00 36.95 4.16
2495 11684 1.863662 TTCTCGGACTCGGCAGACAC 61.864 60.000 0.00 0.00 36.95 3.67
2500 11689 0.894184 AGTTCTTCTCGGACTCGGCA 60.894 55.000 0.00 0.00 36.95 5.69
2501 11690 0.179158 GAGTTCTTCTCGGACTCGGC 60.179 60.000 0.00 0.00 36.95 5.54
2517 11706 4.969484 AGATGGTTTTGTTAGGTTCGAGT 58.031 39.130 0.00 0.00 0.00 4.18
2533 11722 6.960542 CCCTATAATCCTAACTGGTAGATGGT 59.039 42.308 0.16 0.00 37.07 3.55
2534 11723 6.127026 GCCCTATAATCCTAACTGGTAGATGG 60.127 46.154 0.16 0.00 37.07 3.51
2539 11728 5.906495 TGTTGCCCTATAATCCTAACTGGTA 59.094 40.000 0.00 0.00 37.07 3.25
2542 11731 6.119536 TGTTGTTGCCCTATAATCCTAACTG 58.880 40.000 0.00 0.00 0.00 3.16
2543 11732 6.321821 TGTTGTTGCCCTATAATCCTAACT 57.678 37.500 0.00 0.00 0.00 2.24
2544 11733 7.717875 TGTATGTTGTTGCCCTATAATCCTAAC 59.282 37.037 0.00 0.00 0.00 2.34
2546 11735 7.147461 TGTGTATGTTGTTGCCCTATAATCCTA 60.147 37.037 0.00 0.00 0.00 2.94
2554 11743 4.720046 TCTTTGTGTATGTTGTTGCCCTA 58.280 39.130 0.00 0.00 0.00 3.53
2558 11747 6.144402 CCAATTCTCTTTGTGTATGTTGTTGC 59.856 38.462 0.00 0.00 0.00 4.17
2561 11750 6.068010 TCCCAATTCTCTTTGTGTATGTTGT 58.932 36.000 0.00 0.00 0.00 3.32
2568 11757 5.656416 TCACTTTTCCCAATTCTCTTTGTGT 59.344 36.000 0.00 0.00 0.00 3.72
2569 11758 6.147864 TCACTTTTCCCAATTCTCTTTGTG 57.852 37.500 0.00 0.00 0.00 3.33
2606 11795 6.349243 TCGAGTTGTTCTATTTTGTCCCTA 57.651 37.500 0.00 0.00 0.00 3.53
2616 11805 3.746492 GTGTTGCCTTCGAGTTGTTCTAT 59.254 43.478 0.00 0.00 0.00 1.98
2646 11839 0.857287 GACACGGTTTGTTCTCGTCC 59.143 55.000 0.00 0.00 39.17 4.79
2648 11841 2.234300 ATGACACGGTTTGTTCTCGT 57.766 45.000 0.00 0.00 39.17 4.18
2662 11855 0.958382 GGCGGTAGTTGGCAATGACA 60.958 55.000 1.92 0.00 0.00 3.58
2663 11856 0.958382 TGGCGGTAGTTGGCAATGAC 60.958 55.000 1.92 4.50 39.13 3.06
2667 11860 1.302192 GAGTGGCGGTAGTTGGCAA 60.302 57.895 0.00 0.00 44.01 4.52
2671 11864 2.813908 GGCGAGTGGCGGTAGTTG 60.814 66.667 0.00 0.00 44.92 3.16
2680 11873 0.892755 TAGTTGGTGTAGGCGAGTGG 59.107 55.000 0.00 0.00 0.00 4.00
2682 11875 1.274447 GGTTAGTTGGTGTAGGCGAGT 59.726 52.381 0.00 0.00 0.00 4.18
2693 11887 4.704965 GATGGCCTTAGTAGGTTAGTTGG 58.295 47.826 3.32 0.00 44.00 3.77
2749 11943 3.202829 TGACCTTTGGTGGTAGTCAAC 57.797 47.619 0.00 0.00 41.00 3.18
2751 11945 3.054287 TGTTTGACCTTTGGTGGTAGTCA 60.054 43.478 0.00 0.00 41.00 3.41
2756 11950 2.038659 CCATGTTTGACCTTTGGTGGT 58.961 47.619 0.00 0.00 44.10 4.16
2764 11958 3.529948 TGTTGCCCATGTTTGACCT 57.470 47.368 0.00 0.00 0.00 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.