Multiple sequence alignment - TraesCS3B01G542000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G542000 chr3B 100.000 2872 0 0 1 2872 780049806 780046935 0.000000e+00 5304.0
1 TraesCS3B01G542000 chr3B 94.364 2076 101 6 811 2872 779963184 779961111 0.000000e+00 3171.0
2 TraesCS3B01G542000 chr3B 93.882 2076 107 7 811 2872 779805166 779803097 0.000000e+00 3114.0
3 TraesCS3B01G542000 chr3B 93.279 2068 127 7 811 2872 780133015 780130954 0.000000e+00 3038.0
4 TraesCS3B01G542000 chr3B 90.945 2010 127 22 871 2872 780081257 780079295 0.000000e+00 2652.0
5 TraesCS3B01G542000 chr3B 92.852 1343 62 10 1535 2872 780247593 780246280 0.000000e+00 1917.0
6 TraesCS3B01G542000 chr3B 96.129 620 19 2 2257 2872 779930337 779929719 0.000000e+00 1007.0
7 TraesCS3B01G542000 chr3B 96.679 542 12 3 2335 2872 779987039 779986500 0.000000e+00 896.0
8 TraesCS3B01G542000 chr3B 81.897 1044 135 32 955 1954 779989610 779988577 0.000000e+00 832.0
9 TraesCS3B01G542000 chr3B 94.268 157 9 0 650 806 780133212 780133056 1.030000e-59 241.0
10 TraesCS3B01G542000 chr3B 92.357 157 12 0 650 806 779963381 779963225 1.040000e-54 224.0
11 TraesCS3B01G542000 chr3B 89.241 158 15 2 644 801 780081457 780081302 2.260000e-46 196.0
12 TraesCS3B01G542000 chr3B 87.681 138 14 2 671 805 780090444 780090307 1.070000e-34 158.0
13 TraesCS3B01G542000 chr3B 96.552 58 2 0 472 529 779963435 779963378 2.360000e-16 97.1
14 TraesCS3B01G542000 chr3B 96.552 58 2 0 472 529 780133266 780133209 2.360000e-16 97.1
15 TraesCS3B01G542000 chr3B 94.737 57 3 0 473 529 780081511 780081455 3.940000e-14 89.8
16 TraesCS3B01G542000 chr3B 95.455 44 2 0 1 44 779805477 779805434 1.430000e-08 71.3
17 TraesCS3B01G542000 chr3B 97.059 34 1 0 1961 1994 779804093 779804060 1.110000e-04 58.4
18 TraesCS3B01G542000 chr3B 97.059 34 1 0 1961 1994 780080278 780080245 1.110000e-04 58.4
19 TraesCS3B01G542000 chr3D 93.304 1150 59 7 811 1959 583009829 583008697 0.000000e+00 1681.0
20 TraesCS3B01G542000 chr3D 83.502 1085 125 32 827 1874 582909769 582908702 0.000000e+00 963.0
21 TraesCS3B01G542000 chr3D 82.498 1137 131 44 862 1942 583001517 583000393 0.000000e+00 935.0
22 TraesCS3B01G542000 chr3D 83.463 1028 116 32 827 1817 582922191 582921181 0.000000e+00 907.0
23 TraesCS3B01G542000 chr3D 91.472 598 44 5 992 1584 582991823 582991228 0.000000e+00 815.0
24 TraesCS3B01G542000 chr3D 88.023 693 64 10 2108 2783 582990663 582989973 0.000000e+00 802.0
25 TraesCS3B01G542000 chr3D 88.645 546 51 6 2304 2844 583008217 583007678 0.000000e+00 654.0
26 TraesCS3B01G542000 chr3D 93.085 376 18 3 1582 1957 582991192 582990825 7.000000e-151 544.0
27 TraesCS3B01G542000 chr3D 91.358 162 12 2 646 806 583010030 583009870 1.340000e-53 220.0
28 TraesCS3B01G542000 chr3D 95.276 127 5 1 528 653 30623261 30623387 1.750000e-47 200.0
29 TraesCS3B01G542000 chr3D 93.431 137 6 3 528 662 67064911 67064776 1.750000e-47 200.0
30 TraesCS3B01G542000 chr3D 95.455 44 2 0 1 44 583010143 583010100 1.430000e-08 71.3
31 TraesCS3B01G542000 chrUn 94.054 555 28 3 1735 2289 473758985 473759534 0.000000e+00 837.0
32 TraesCS3B01G542000 chrUn 96.146 493 11 4 2386 2872 388576066 388575576 0.000000e+00 798.0
33 TraesCS3B01G542000 chrUn 84.491 432 46 13 645 1069 41703885 41704302 9.580000e-110 407.0
34 TraesCS3B01G542000 chrUn 93.776 241 8 5 2634 2872 41608052 41607817 3.520000e-94 355.0
35 TraesCS3B01G542000 chrUn 93.776 241 8 5 2634 2872 349987718 349987483 3.520000e-94 355.0
36 TraesCS3B01G542000 chrUn 97.175 177 5 0 2386 2562 41609426 41609250 1.670000e-77 300.0
37 TraesCS3B01G542000 chrUn 94.615 130 6 1 527 655 322720409 322720538 1.750000e-47 200.0
38 TraesCS3B01G542000 chrUn 98.182 55 1 0 472 526 41703829 41703883 2.360000e-16 97.1
39 TraesCS3B01G542000 chrUn 100.000 31 0 0 1961 1991 473759125 473759155 1.110000e-04 58.4
40 TraesCS3B01G542000 chr6B 80.420 904 130 27 1011 1870 4856535 4857435 0.000000e+00 645.0
41 TraesCS3B01G542000 chr6B 95.522 402 18 0 63 464 717855872 717855471 0.000000e+00 643.0
42 TraesCS3B01G542000 chr6B 89.000 200 20 2 1661 1859 3218443 3218245 2.210000e-61 246.0
43 TraesCS3B01G542000 chr6B 89.286 196 18 3 1666 1860 4889027 4888834 2.860000e-60 243.0
44 TraesCS3B01G542000 chr2B 95.522 402 18 0 63 464 199167238 199166837 0.000000e+00 643.0
45 TraesCS3B01G542000 chr2B 95.522 402 18 0 63 464 727731148 727730747 0.000000e+00 643.0
46 TraesCS3B01G542000 chr2B 94.656 131 5 2 526 655 210262700 210262829 4.850000e-48 202.0
47 TraesCS3B01G542000 chr1D 95.320 406 18 1 59 464 59878528 59878124 0.000000e+00 643.0
48 TraesCS3B01G542000 chr1D 95.086 407 19 1 58 464 293794637 293794232 8.680000e-180 640.0
49 TraesCS3B01G542000 chr6D 95.511 401 18 0 64 464 432917705 432917305 2.410000e-180 641.0
50 TraesCS3B01G542000 chr6D 79.241 896 149 21 1011 1872 1635762 1636654 8.860000e-165 590.0
51 TraesCS3B01G542000 chr6D 88.205 195 21 2 1666 1859 1645307 1645500 6.190000e-57 231.0
52 TraesCS3B01G542000 chr6D 85.648 216 30 1 1662 1876 1761359 1761574 2.880000e-55 226.0
53 TraesCS3B01G542000 chr6D 86.700 203 25 2 1658 1859 1628348 1628549 1.040000e-54 224.0
54 TraesCS3B01G542000 chr6D 87.629 194 22 2 1667 1859 1649017 1649209 1.040000e-54 224.0
55 TraesCS3B01G542000 chr6D 86.935 199 26 0 1661 1859 1902686 1902488 1.040000e-54 224.0
56 TraesCS3B01G542000 chr5B 95.522 402 17 1 64 464 362955800 362955399 2.410000e-180 641.0
57 TraesCS3B01G542000 chr5B 94.615 130 6 1 526 654 555175601 555175730 1.750000e-47 200.0
58 TraesCS3B01G542000 chr5A 95.511 401 18 0 64 464 433559700 433560100 2.410000e-180 641.0
59 TraesCS3B01G542000 chr5A 94.615 130 6 1 528 656 677949502 677949631 1.750000e-47 200.0
60 TraesCS3B01G542000 chr2A 95.500 400 18 0 65 464 55884066 55883667 8.680000e-180 640.0
61 TraesCS3B01G542000 chr7B 94.615 130 6 1 526 654 489146902 489146773 1.750000e-47 200.0
62 TraesCS3B01G542000 chr4D 94.615 130 6 1 528 656 497646534 497646663 1.750000e-47 200.0
63 TraesCS3B01G542000 chr4B 92.701 137 7 3 527 661 514055891 514055756 8.120000e-46 195.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G542000 chr3B 780046935 780049806 2871 True 5304.000000 5304 100.000000 1 2872 1 chr3B.!!$R2 2871
1 TraesCS3B01G542000 chr3B 780246280 780247593 1313 True 1917.000000 1917 92.852000 1535 2872 1 chr3B.!!$R4 1337
2 TraesCS3B01G542000 chr3B 779961111 779963435 2324 True 1164.033333 3171 94.424333 472 2872 3 chr3B.!!$R6 2400
3 TraesCS3B01G542000 chr3B 780130954 780133266 2312 True 1125.366667 3038 94.699667 472 2872 3 chr3B.!!$R9 2400
4 TraesCS3B01G542000 chr3B 779803097 779805477 2380 True 1081.233333 3114 95.465333 1 2872 3 chr3B.!!$R5 2871
5 TraesCS3B01G542000 chr3B 779929719 779930337 618 True 1007.000000 1007 96.129000 2257 2872 1 chr3B.!!$R1 615
6 TraesCS3B01G542000 chr3B 779986500 779989610 3110 True 864.000000 896 89.288000 955 2872 2 chr3B.!!$R7 1917
7 TraesCS3B01G542000 chr3B 780079295 780081511 2216 True 749.050000 2652 92.995500 473 2872 4 chr3B.!!$R8 2399
8 TraesCS3B01G542000 chr3D 582908702 582909769 1067 True 963.000000 963 83.502000 827 1874 1 chr3D.!!$R2 1047
9 TraesCS3B01G542000 chr3D 583000393 583001517 1124 True 935.000000 935 82.498000 862 1942 1 chr3D.!!$R4 1080
10 TraesCS3B01G542000 chr3D 582921181 582922191 1010 True 907.000000 907 83.463000 827 1817 1 chr3D.!!$R3 990
11 TraesCS3B01G542000 chr3D 582989973 582991823 1850 True 720.333333 815 90.860000 992 2783 3 chr3D.!!$R5 1791
12 TraesCS3B01G542000 chr3D 583007678 583010143 2465 True 656.575000 1681 92.190500 1 2844 4 chr3D.!!$R6 2843
13 TraesCS3B01G542000 chrUn 473758985 473759534 549 False 447.700000 837 97.027000 1735 2289 2 chrUn.!!$F3 554
14 TraesCS3B01G542000 chrUn 41607817 41609426 1609 True 327.500000 355 95.475500 2386 2872 2 chrUn.!!$R3 486
15 TraesCS3B01G542000 chr6B 4856535 4857435 900 False 645.000000 645 80.420000 1011 1870 1 chr6B.!!$F1 859
16 TraesCS3B01G542000 chr6D 1635762 1636654 892 False 590.000000 590 79.241000 1011 1872 1 chr6D.!!$F2 861
17 TraesCS3B01G542000 chr6D 1645307 1649209 3902 False 227.500000 231 87.917000 1666 1859 2 chr6D.!!$F4 193

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
145 146 0.032017 AAGAGTATCACCCGGCCTCT 60.032 55.0 0.0 0.0 37.82 3.69 F
155 156 0.034059 CCCGGCCTCTGCATAACTAG 59.966 60.0 0.0 0.0 40.13 2.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1408 1473 0.971447 AGCCCAGTCTCGGACTTACC 60.971 60.000 4.08 0.0 41.37 2.85 R
2141 2398 2.278923 GCGAAGGAGCTAGGCGAC 60.279 66.667 0.00 0.0 0.00 5.19 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
92 93 8.865590 TTTTGATAAAGGGCGCTTTTATTATC 57.134 30.769 30.56 25.12 32.42 1.75
93 94 7.817418 TTGATAAAGGGCGCTTTTATTATCT 57.183 32.000 30.56 9.43 32.42 1.98
94 95 7.435068 TGATAAAGGGCGCTTTTATTATCTC 57.565 36.000 30.56 16.53 32.42 2.75
95 96 6.995686 TGATAAAGGGCGCTTTTATTATCTCA 59.004 34.615 30.56 18.35 32.42 3.27
96 97 7.500892 TGATAAAGGGCGCTTTTATTATCTCAA 59.499 33.333 30.56 11.58 32.42 3.02
97 98 6.524101 AAAGGGCGCTTTTATTATCTCAAA 57.476 33.333 21.93 0.00 0.00 2.69
98 99 6.524101 AAGGGCGCTTTTATTATCTCAAAA 57.476 33.333 10.73 0.00 0.00 2.44
99 100 6.715347 AGGGCGCTTTTATTATCTCAAAAT 57.285 33.333 7.64 0.00 0.00 1.82
100 101 6.507023 AGGGCGCTTTTATTATCTCAAAATG 58.493 36.000 7.64 0.00 0.00 2.32
101 102 6.096846 AGGGCGCTTTTATTATCTCAAAATGT 59.903 34.615 7.64 0.00 0.00 2.71
102 103 7.284489 AGGGCGCTTTTATTATCTCAAAATGTA 59.716 33.333 7.64 0.00 0.00 2.29
103 104 7.591426 GGGCGCTTTTATTATCTCAAAATGTAG 59.409 37.037 7.64 0.00 0.00 2.74
104 105 7.113544 GGCGCTTTTATTATCTCAAAATGTAGC 59.886 37.037 7.64 0.00 0.00 3.58
105 106 7.643764 GCGCTTTTATTATCTCAAAATGTAGCA 59.356 33.333 0.00 0.00 0.00 3.49
106 107 9.669353 CGCTTTTATTATCTCAAAATGTAGCAT 57.331 29.630 0.00 0.00 0.00 3.79
113 114 6.922247 ATCTCAAAATGTAGCATCAGAGTG 57.078 37.500 0.00 0.00 0.00 3.51
114 115 6.041423 TCTCAAAATGTAGCATCAGAGTGA 57.959 37.500 0.00 0.00 0.00 3.41
115 116 6.647229 TCTCAAAATGTAGCATCAGAGTGAT 58.353 36.000 0.00 0.00 37.65 3.06
116 117 7.785033 TCTCAAAATGTAGCATCAGAGTGATA 58.215 34.615 0.00 0.00 34.28 2.15
117 118 7.708322 TCTCAAAATGTAGCATCAGAGTGATAC 59.292 37.037 0.00 0.00 40.43 2.24
122 123 5.111989 TGTAGCATCAGAGTGATACAAAGC 58.888 41.667 2.88 0.00 44.98 3.51
123 124 4.212143 AGCATCAGAGTGATACAAAGCA 57.788 40.909 0.00 0.00 34.28 3.91
124 125 4.778579 AGCATCAGAGTGATACAAAGCAT 58.221 39.130 0.00 0.00 34.28 3.79
125 126 5.191426 AGCATCAGAGTGATACAAAGCATT 58.809 37.500 0.00 0.00 34.28 3.56
126 127 6.351711 AGCATCAGAGTGATACAAAGCATTA 58.648 36.000 0.00 0.00 34.28 1.90
127 128 6.825213 AGCATCAGAGTGATACAAAGCATTAA 59.175 34.615 0.00 0.00 34.28 1.40
128 129 7.012138 AGCATCAGAGTGATACAAAGCATTAAG 59.988 37.037 0.00 0.00 34.28 1.85
129 130 7.011763 GCATCAGAGTGATACAAAGCATTAAGA 59.988 37.037 0.00 0.00 34.28 2.10
130 131 8.549548 CATCAGAGTGATACAAAGCATTAAGAG 58.450 37.037 0.00 0.00 34.28 2.85
131 132 7.615403 TCAGAGTGATACAAAGCATTAAGAGT 58.385 34.615 0.00 0.00 0.00 3.24
132 133 8.749354 TCAGAGTGATACAAAGCATTAAGAGTA 58.251 33.333 0.00 0.00 0.00 2.59
133 134 9.539825 CAGAGTGATACAAAGCATTAAGAGTAT 57.460 33.333 0.00 0.00 0.00 2.12
134 135 9.757227 AGAGTGATACAAAGCATTAAGAGTATC 57.243 33.333 0.00 0.00 38.68 2.24
135 136 9.534565 GAGTGATACAAAGCATTAAGAGTATCA 57.465 33.333 8.51 8.51 43.00 2.15
137 138 8.662781 TGATACAAAGCATTAAGAGTATCACC 57.337 34.615 8.51 0.00 41.41 4.02
138 139 7.715249 TGATACAAAGCATTAAGAGTATCACCC 59.285 37.037 8.51 0.00 41.41 4.61
139 140 4.876107 ACAAAGCATTAAGAGTATCACCCG 59.124 41.667 0.00 0.00 37.82 5.28
140 141 3.753294 AGCATTAAGAGTATCACCCGG 57.247 47.619 0.00 0.00 37.82 5.73
141 142 2.143925 GCATTAAGAGTATCACCCGGC 58.856 52.381 0.00 0.00 37.82 6.13
142 143 2.767505 CATTAAGAGTATCACCCGGCC 58.232 52.381 0.00 0.00 37.82 6.13
143 144 2.170012 TTAAGAGTATCACCCGGCCT 57.830 50.000 0.00 0.00 37.82 5.19
144 145 1.700955 TAAGAGTATCACCCGGCCTC 58.299 55.000 0.00 0.00 37.82 4.70
145 146 0.032017 AAGAGTATCACCCGGCCTCT 60.032 55.000 0.00 0.00 37.82 3.69
146 147 0.757188 AGAGTATCACCCGGCCTCTG 60.757 60.000 0.00 0.00 37.82 3.35
147 148 2.109181 GTATCACCCGGCCTCTGC 59.891 66.667 0.00 0.00 0.00 4.26
148 149 2.364973 TATCACCCGGCCTCTGCA 60.365 61.111 0.00 0.00 40.13 4.41
149 150 1.766059 TATCACCCGGCCTCTGCAT 60.766 57.895 0.00 0.00 40.13 3.96
150 151 0.471022 TATCACCCGGCCTCTGCATA 60.471 55.000 0.00 0.00 40.13 3.14
151 152 1.344953 ATCACCCGGCCTCTGCATAA 61.345 55.000 0.00 0.00 40.13 1.90
152 153 1.819632 CACCCGGCCTCTGCATAAC 60.820 63.158 0.00 0.00 40.13 1.89
153 154 1.995626 ACCCGGCCTCTGCATAACT 60.996 57.895 0.00 0.00 40.13 2.24
154 155 0.689745 ACCCGGCCTCTGCATAACTA 60.690 55.000 0.00 0.00 40.13 2.24
155 156 0.034059 CCCGGCCTCTGCATAACTAG 59.966 60.000 0.00 0.00 40.13 2.57
156 157 0.034059 CCGGCCTCTGCATAACTAGG 59.966 60.000 0.00 0.00 40.13 3.02
157 158 1.040646 CGGCCTCTGCATAACTAGGA 58.959 55.000 0.00 0.00 40.13 2.94
158 159 1.620819 CGGCCTCTGCATAACTAGGAT 59.379 52.381 0.00 0.00 40.13 3.24
159 160 2.611473 CGGCCTCTGCATAACTAGGATG 60.611 54.545 0.00 0.00 40.13 3.51
174 175 3.184094 GATGCACACAGCCAAACAC 57.816 52.632 0.00 0.00 44.83 3.32
175 176 0.318955 GATGCACACAGCCAAACACC 60.319 55.000 0.00 0.00 44.83 4.16
176 177 1.042003 ATGCACACAGCCAAACACCA 61.042 50.000 0.00 0.00 44.83 4.17
177 178 1.042003 TGCACACAGCCAAACACCAT 61.042 50.000 0.00 0.00 44.83 3.55
178 179 0.104671 GCACACAGCCAAACACCATT 59.895 50.000 0.00 0.00 37.23 3.16
179 180 1.339610 GCACACAGCCAAACACCATTA 59.660 47.619 0.00 0.00 37.23 1.90
180 181 2.607771 GCACACAGCCAAACACCATTAG 60.608 50.000 0.00 0.00 37.23 1.73
181 182 2.622942 CACACAGCCAAACACCATTAGT 59.377 45.455 0.00 0.00 0.00 2.24
182 183 2.884639 ACACAGCCAAACACCATTAGTC 59.115 45.455 0.00 0.00 0.00 2.59
183 184 3.149196 CACAGCCAAACACCATTAGTCT 58.851 45.455 0.00 0.00 0.00 3.24
184 185 3.058016 CACAGCCAAACACCATTAGTCTG 60.058 47.826 0.00 0.00 0.00 3.51
185 186 3.181445 ACAGCCAAACACCATTAGTCTGA 60.181 43.478 0.00 0.00 0.00 3.27
186 187 4.012374 CAGCCAAACACCATTAGTCTGAT 58.988 43.478 0.00 0.00 0.00 2.90
187 188 5.185454 CAGCCAAACACCATTAGTCTGATA 58.815 41.667 0.00 0.00 0.00 2.15
188 189 5.647658 CAGCCAAACACCATTAGTCTGATAA 59.352 40.000 0.00 0.00 0.00 1.75
189 190 6.150976 CAGCCAAACACCATTAGTCTGATAAA 59.849 38.462 0.00 0.00 0.00 1.40
190 191 6.891908 AGCCAAACACCATTAGTCTGATAAAT 59.108 34.615 0.00 0.00 0.00 1.40
191 192 8.052748 AGCCAAACACCATTAGTCTGATAAATA 58.947 33.333 0.00 0.00 0.00 1.40
192 193 8.345565 GCCAAACACCATTAGTCTGATAAATAG 58.654 37.037 0.00 0.00 0.00 1.73
193 194 9.613428 CCAAACACCATTAGTCTGATAAATAGA 57.387 33.333 0.00 0.00 0.00 1.98
227 228 4.956034 CGACAATTCGGCAATAGTAGAG 57.044 45.455 0.00 0.00 41.89 2.43
228 229 4.360563 CGACAATTCGGCAATAGTAGAGT 58.639 43.478 0.00 0.00 41.89 3.24
229 230 4.441415 CGACAATTCGGCAATAGTAGAGTC 59.559 45.833 0.00 0.00 41.89 3.36
230 231 4.694339 ACAATTCGGCAATAGTAGAGTCC 58.306 43.478 0.00 0.00 0.00 3.85
231 232 4.161565 ACAATTCGGCAATAGTAGAGTCCA 59.838 41.667 0.00 0.00 0.00 4.02
232 233 5.163301 ACAATTCGGCAATAGTAGAGTCCAT 60.163 40.000 0.00 0.00 0.00 3.41
233 234 6.041637 ACAATTCGGCAATAGTAGAGTCCATA 59.958 38.462 0.00 0.00 0.00 2.74
234 235 5.707242 TTCGGCAATAGTAGAGTCCATAG 57.293 43.478 0.00 0.00 0.00 2.23
235 236 4.981812 TCGGCAATAGTAGAGTCCATAGA 58.018 43.478 0.00 0.00 0.00 1.98
236 237 4.760715 TCGGCAATAGTAGAGTCCATAGAC 59.239 45.833 0.00 0.00 43.89 2.59
237 238 4.082679 CGGCAATAGTAGAGTCCATAGACC 60.083 50.000 0.00 0.00 44.72 3.85
238 239 4.082679 GGCAATAGTAGAGTCCATAGACCG 60.083 50.000 0.00 0.00 44.72 4.79
239 240 4.760715 GCAATAGTAGAGTCCATAGACCGA 59.239 45.833 0.00 0.00 44.72 4.69
240 241 5.335035 GCAATAGTAGAGTCCATAGACCGAC 60.335 48.000 0.00 0.00 44.72 4.79
241 242 3.928005 AGTAGAGTCCATAGACCGACA 57.072 47.619 0.00 0.00 44.72 4.35
242 243 3.543665 AGTAGAGTCCATAGACCGACAC 58.456 50.000 0.00 0.00 44.72 3.67
243 244 2.810870 AGAGTCCATAGACCGACACT 57.189 50.000 0.00 0.00 44.72 3.55
244 245 3.928005 AGAGTCCATAGACCGACACTA 57.072 47.619 0.00 0.00 44.72 2.74
245 246 4.440826 AGAGTCCATAGACCGACACTAT 57.559 45.455 0.00 0.00 44.72 2.12
246 247 4.138290 AGAGTCCATAGACCGACACTATG 58.862 47.826 0.00 0.00 44.72 2.23
247 248 2.623889 AGTCCATAGACCGACACTATGC 59.376 50.000 13.79 5.90 44.72 3.14
248 249 1.961394 TCCATAGACCGACACTATGCC 59.039 52.381 13.79 0.00 43.10 4.40
249 250 1.964223 CCATAGACCGACACTATGCCT 59.036 52.381 13.79 0.00 43.10 4.75
250 251 3.154710 CCATAGACCGACACTATGCCTA 58.845 50.000 13.79 0.00 43.10 3.93
251 252 3.764434 CCATAGACCGACACTATGCCTAT 59.236 47.826 13.79 0.00 43.10 2.57
252 253 4.380973 CCATAGACCGACACTATGCCTATG 60.381 50.000 13.79 0.00 43.10 2.23
253 254 2.667470 AGACCGACACTATGCCTATGT 58.333 47.619 0.00 0.00 0.00 2.29
254 255 2.623889 AGACCGACACTATGCCTATGTC 59.376 50.000 0.00 0.00 39.50 3.06
261 262 6.037423 GACACTATGCCTATGTCGAAAAAG 57.963 41.667 0.00 0.00 33.94 2.27
262 263 5.730550 ACACTATGCCTATGTCGAAAAAGA 58.269 37.500 0.00 0.00 0.00 2.52
263 264 6.349300 ACACTATGCCTATGTCGAAAAAGAT 58.651 36.000 0.00 0.00 0.00 2.40
264 265 6.258727 ACACTATGCCTATGTCGAAAAAGATG 59.741 38.462 0.00 0.00 0.00 2.90
265 266 5.760253 ACTATGCCTATGTCGAAAAAGATGG 59.240 40.000 0.00 0.00 0.00 3.51
266 267 3.950397 TGCCTATGTCGAAAAAGATGGT 58.050 40.909 0.00 0.00 0.00 3.55
267 268 3.689161 TGCCTATGTCGAAAAAGATGGTG 59.311 43.478 0.00 0.00 0.00 4.17
268 269 3.065371 GCCTATGTCGAAAAAGATGGTGG 59.935 47.826 0.00 0.00 0.00 4.61
269 270 4.513442 CCTATGTCGAAAAAGATGGTGGA 58.487 43.478 0.00 0.00 0.00 4.02
270 271 4.332819 CCTATGTCGAAAAAGATGGTGGAC 59.667 45.833 0.00 0.00 0.00 4.02
271 272 2.500229 TGTCGAAAAAGATGGTGGACC 58.500 47.619 0.00 0.00 0.00 4.46
272 273 1.463444 GTCGAAAAAGATGGTGGACCG 59.537 52.381 0.00 0.00 39.43 4.79
273 274 1.345089 TCGAAAAAGATGGTGGACCGA 59.655 47.619 0.00 0.00 39.43 4.69
274 275 1.732259 CGAAAAAGATGGTGGACCGAG 59.268 52.381 0.00 0.00 39.43 4.63
275 276 1.468914 GAAAAAGATGGTGGACCGAGC 59.531 52.381 0.00 0.00 39.43 5.03
276 277 0.322546 AAAAGATGGTGGACCGAGCC 60.323 55.000 0.00 0.00 39.43 4.70
277 278 2.521958 AAAGATGGTGGACCGAGCCG 62.522 60.000 0.00 0.00 39.43 5.52
289 290 2.819667 CGAGCCGGAGATTATGCTG 58.180 57.895 5.05 0.00 33.41 4.41
290 291 1.287730 CGAGCCGGAGATTATGCTGC 61.288 60.000 5.05 0.00 33.41 5.25
291 292 0.034616 GAGCCGGAGATTATGCTGCT 59.965 55.000 5.05 0.00 42.43 4.24
292 293 1.273606 GAGCCGGAGATTATGCTGCTA 59.726 52.381 5.05 0.00 39.87 3.49
293 294 1.905215 AGCCGGAGATTATGCTGCTAT 59.095 47.619 5.05 0.00 38.03 2.97
294 295 2.093764 AGCCGGAGATTATGCTGCTATC 60.094 50.000 5.05 1.76 38.03 2.08
295 296 2.898705 CCGGAGATTATGCTGCTATCC 58.101 52.381 0.00 0.00 0.00 2.59
296 297 2.234661 CCGGAGATTATGCTGCTATCCA 59.765 50.000 0.00 0.00 0.00 3.41
297 298 3.118482 CCGGAGATTATGCTGCTATCCAT 60.118 47.826 0.00 0.00 0.00 3.41
298 299 3.869832 CGGAGATTATGCTGCTATCCATG 59.130 47.826 0.00 0.00 0.00 3.66
299 300 4.622457 CGGAGATTATGCTGCTATCCATGT 60.622 45.833 0.00 0.00 0.00 3.21
300 301 5.251764 GGAGATTATGCTGCTATCCATGTT 58.748 41.667 0.00 0.00 0.00 2.71
301 302 5.123502 GGAGATTATGCTGCTATCCATGTTG 59.876 44.000 0.00 0.00 0.00 3.33
302 303 5.008331 AGATTATGCTGCTATCCATGTTGG 58.992 41.667 0.00 0.00 39.43 3.77
303 304 1.991121 ATGCTGCTATCCATGTTGGG 58.009 50.000 0.00 0.00 38.32 4.12
304 305 0.625316 TGCTGCTATCCATGTTGGGT 59.375 50.000 0.00 0.00 38.32 4.51
305 306 1.843206 TGCTGCTATCCATGTTGGGTA 59.157 47.619 0.00 0.00 38.32 3.69
306 307 2.240921 TGCTGCTATCCATGTTGGGTAA 59.759 45.455 0.00 0.00 38.32 2.85
307 308 3.287222 GCTGCTATCCATGTTGGGTAAA 58.713 45.455 0.00 0.00 38.32 2.01
308 309 3.699038 GCTGCTATCCATGTTGGGTAAAA 59.301 43.478 0.00 0.00 38.32 1.52
309 310 4.159506 GCTGCTATCCATGTTGGGTAAAAA 59.840 41.667 0.00 0.00 38.32 1.94
310 311 5.650543 CTGCTATCCATGTTGGGTAAAAAC 58.349 41.667 0.00 0.00 38.32 2.43
311 312 4.464597 TGCTATCCATGTTGGGTAAAAACC 59.535 41.667 0.00 0.00 38.32 3.27
312 313 4.709886 GCTATCCATGTTGGGTAAAAACCT 59.290 41.667 0.00 0.00 38.32 3.50
313 314 5.186992 GCTATCCATGTTGGGTAAAAACCTT 59.813 40.000 0.00 0.00 38.32 3.50
314 315 5.738619 ATCCATGTTGGGTAAAAACCTTC 57.261 39.130 0.00 0.00 38.32 3.46
315 316 3.570550 TCCATGTTGGGTAAAAACCTTCG 59.429 43.478 0.00 0.00 38.32 3.79
316 317 3.319689 CCATGTTGGGTAAAAACCTTCGT 59.680 43.478 0.00 0.00 32.67 3.85
317 318 4.519730 CCATGTTGGGTAAAAACCTTCGTA 59.480 41.667 0.00 0.00 32.67 3.43
318 319 5.335348 CCATGTTGGGTAAAAACCTTCGTAG 60.335 44.000 0.00 0.00 32.67 3.51
319 320 3.565063 TGTTGGGTAAAAACCTTCGTAGC 59.435 43.478 0.00 0.00 0.00 3.58
320 321 2.781923 TGGGTAAAAACCTTCGTAGCC 58.218 47.619 0.00 0.00 35.19 3.93
321 322 2.106166 TGGGTAAAAACCTTCGTAGCCA 59.894 45.455 0.00 0.00 40.78 4.75
322 323 2.485426 GGGTAAAAACCTTCGTAGCCAC 59.515 50.000 0.00 0.00 34.83 5.01
323 324 3.405831 GGTAAAAACCTTCGTAGCCACT 58.594 45.455 0.00 0.00 0.00 4.00
324 325 3.817084 GGTAAAAACCTTCGTAGCCACTT 59.183 43.478 0.00 0.00 0.00 3.16
325 326 3.982576 AAAAACCTTCGTAGCCACTTG 57.017 42.857 0.00 0.00 0.00 3.16
326 327 1.235724 AAACCTTCGTAGCCACTTGC 58.764 50.000 0.00 0.00 41.71 4.01
342 343 4.354155 GCTCCAACAGCGTACACA 57.646 55.556 0.00 0.00 38.76 3.72
343 344 1.860078 GCTCCAACAGCGTACACAC 59.140 57.895 0.00 0.00 38.76 3.82
344 345 1.566018 GCTCCAACAGCGTACACACC 61.566 60.000 0.00 0.00 38.76 4.16
345 346 1.282248 CTCCAACAGCGTACACACCG 61.282 60.000 0.00 0.00 0.00 4.94
351 352 2.356553 GCGTACACACCGCCTTGA 60.357 61.111 0.00 0.00 45.20 3.02
352 353 1.957186 GCGTACACACCGCCTTGAA 60.957 57.895 0.00 0.00 45.20 2.69
353 354 1.857364 CGTACACACCGCCTTGAAC 59.143 57.895 0.00 0.00 0.00 3.18
354 355 0.876777 CGTACACACCGCCTTGAACA 60.877 55.000 0.00 0.00 0.00 3.18
355 356 1.519408 GTACACACCGCCTTGAACAT 58.481 50.000 0.00 0.00 0.00 2.71
356 357 1.463444 GTACACACCGCCTTGAACATC 59.537 52.381 0.00 0.00 0.00 3.06
357 358 1.227999 ACACACCGCCTTGAACATCG 61.228 55.000 0.00 0.00 0.00 3.84
358 359 1.671054 ACACCGCCTTGAACATCGG 60.671 57.895 0.00 0.00 46.61 4.18
360 361 3.981308 CCGCCTTGAACATCGGTT 58.019 55.556 0.00 0.00 40.76 4.44
361 362 1.501741 CCGCCTTGAACATCGGTTG 59.498 57.895 0.00 0.00 37.36 3.77
362 363 1.501741 CGCCTTGAACATCGGTTGG 59.498 57.895 0.00 0.00 37.36 3.77
363 364 1.234615 CGCCTTGAACATCGGTTGGT 61.235 55.000 0.00 0.00 37.36 3.67
364 365 1.816074 GCCTTGAACATCGGTTGGTA 58.184 50.000 0.00 0.00 37.36 3.25
365 366 1.467342 GCCTTGAACATCGGTTGGTAC 59.533 52.381 0.00 0.00 37.36 3.34
366 367 2.874457 GCCTTGAACATCGGTTGGTACT 60.874 50.000 0.00 0.00 37.36 2.73
367 368 2.742053 CCTTGAACATCGGTTGGTACTG 59.258 50.000 0.00 0.00 37.36 2.74
368 369 1.803334 TGAACATCGGTTGGTACTGC 58.197 50.000 0.00 0.00 37.36 4.40
369 370 0.719465 GAACATCGGTTGGTACTGCG 59.281 55.000 0.00 0.00 37.36 5.18
370 371 1.296056 AACATCGGTTGGTACTGCGC 61.296 55.000 0.00 0.00 35.46 6.09
371 372 1.447838 CATCGGTTGGTACTGCGCT 60.448 57.895 9.73 0.00 0.00 5.92
372 373 1.019278 CATCGGTTGGTACTGCGCTT 61.019 55.000 9.73 0.00 0.00 4.68
373 374 1.019278 ATCGGTTGGTACTGCGCTTG 61.019 55.000 9.73 3.92 0.00 4.01
374 375 1.959226 CGGTTGGTACTGCGCTTGT 60.959 57.895 9.73 10.50 0.00 3.16
375 376 1.503818 CGGTTGGTACTGCGCTTGTT 61.504 55.000 9.73 0.00 0.00 2.83
376 377 0.040425 GGTTGGTACTGCGCTTGTTG 60.040 55.000 9.73 0.00 0.00 3.33
377 378 0.661020 GTTGGTACTGCGCTTGTTGT 59.339 50.000 9.73 2.40 0.00 3.32
378 379 1.868498 GTTGGTACTGCGCTTGTTGTA 59.132 47.619 9.73 1.39 0.00 2.41
379 380 1.790755 TGGTACTGCGCTTGTTGTAG 58.209 50.000 9.73 0.00 0.00 2.74
380 381 0.442699 GGTACTGCGCTTGTTGTAGC 59.557 55.000 9.73 9.76 37.80 3.58
387 388 3.748021 GCTTGTTGTAGCGAACACC 57.252 52.632 0.00 0.00 38.00 4.16
388 389 0.941542 GCTTGTTGTAGCGAACACCA 59.058 50.000 0.00 0.00 38.00 4.17
389 390 1.333791 GCTTGTTGTAGCGAACACCAC 60.334 52.381 0.00 0.00 38.00 4.16
390 391 0.931702 TTGTTGTAGCGAACACCACG 59.068 50.000 0.00 0.00 38.00 4.94
391 392 0.179105 TGTTGTAGCGAACACCACGT 60.179 50.000 0.00 0.00 38.00 4.49
392 393 1.066757 TGTTGTAGCGAACACCACGTA 59.933 47.619 0.00 0.00 38.00 3.57
393 394 1.453148 GTTGTAGCGAACACCACGTAC 59.547 52.381 0.00 0.00 38.00 3.67
394 395 0.385849 TGTAGCGAACACCACGTACG 60.386 55.000 15.01 15.01 31.43 3.67
395 396 0.110238 GTAGCGAACACCACGTACGA 60.110 55.000 24.41 0.00 0.00 3.43
396 397 0.590682 TAGCGAACACCACGTACGAA 59.409 50.000 24.41 0.00 0.00 3.85
397 398 0.248990 AGCGAACACCACGTACGAAA 60.249 50.000 24.41 0.00 0.00 3.46
398 399 0.111574 GCGAACACCACGTACGAAAC 60.112 55.000 24.41 4.97 0.00 2.78
415 416 4.231753 CGAGTGCGTACAACGGAA 57.768 55.556 6.38 0.00 45.07 4.30
416 417 2.508743 CGAGTGCGTACAACGGAAA 58.491 52.632 6.38 0.00 45.07 3.13
417 418 0.854062 CGAGTGCGTACAACGGAAAA 59.146 50.000 6.38 0.00 45.07 2.29
418 419 1.458064 CGAGTGCGTACAACGGAAAAT 59.542 47.619 6.38 0.00 45.07 1.82
419 420 2.662637 CGAGTGCGTACAACGGAAAATA 59.337 45.455 6.38 0.00 45.07 1.40
420 421 3.121611 CGAGTGCGTACAACGGAAAATAA 59.878 43.478 6.38 0.00 45.07 1.40
421 422 4.388790 GAGTGCGTACAACGGAAAATAAC 58.611 43.478 6.38 0.00 45.07 1.89
422 423 3.187022 AGTGCGTACAACGGAAAATAACC 59.813 43.478 6.38 0.00 45.07 2.85
423 424 3.187022 GTGCGTACAACGGAAAATAACCT 59.813 43.478 0.00 0.00 45.07 3.50
424 425 3.186817 TGCGTACAACGGAAAATAACCTG 59.813 43.478 1.25 0.00 39.47 4.00
425 426 3.739494 CGTACAACGGAAAATAACCTGC 58.261 45.455 0.00 0.00 38.08 4.85
426 427 3.186817 CGTACAACGGAAAATAACCTGCA 59.813 43.478 0.00 0.00 38.08 4.41
427 428 4.319622 CGTACAACGGAAAATAACCTGCAA 60.320 41.667 0.00 0.00 38.08 4.08
428 429 4.657436 ACAACGGAAAATAACCTGCAAA 57.343 36.364 0.00 0.00 0.00 3.68
429 430 4.616953 ACAACGGAAAATAACCTGCAAAG 58.383 39.130 0.00 0.00 0.00 2.77
430 431 3.934457 ACGGAAAATAACCTGCAAAGG 57.066 42.857 0.00 0.00 0.00 3.11
431 432 3.492337 ACGGAAAATAACCTGCAAAGGA 58.508 40.909 0.00 0.00 0.00 3.36
432 433 3.506067 ACGGAAAATAACCTGCAAAGGAG 59.494 43.478 0.00 0.00 0.00 3.69
433 434 3.756434 CGGAAAATAACCTGCAAAGGAGA 59.244 43.478 0.00 0.00 0.00 3.71
434 435 4.217550 CGGAAAATAACCTGCAAAGGAGAA 59.782 41.667 0.00 0.00 0.00 2.87
435 436 5.278758 CGGAAAATAACCTGCAAAGGAGAAA 60.279 40.000 0.00 0.00 0.00 2.52
436 437 5.926542 GGAAAATAACCTGCAAAGGAGAAAC 59.073 40.000 0.00 0.00 0.00 2.78
437 438 6.462347 GGAAAATAACCTGCAAAGGAGAAACA 60.462 38.462 0.00 0.00 0.00 2.83
438 439 5.712152 AATAACCTGCAAAGGAGAAACAG 57.288 39.130 0.00 0.00 0.00 3.16
439 440 2.736670 ACCTGCAAAGGAGAAACAGT 57.263 45.000 0.00 0.00 0.00 3.55
440 441 3.018423 ACCTGCAAAGGAGAAACAGTT 57.982 42.857 0.00 0.00 0.00 3.16
441 442 3.365472 ACCTGCAAAGGAGAAACAGTTT 58.635 40.909 0.00 0.00 0.00 2.66
442 443 3.769300 ACCTGCAAAGGAGAAACAGTTTT 59.231 39.130 0.00 0.00 0.00 2.43
443 444 4.114794 CCTGCAAAGGAGAAACAGTTTTG 58.885 43.478 0.00 0.00 33.18 2.44
444 445 4.381932 CCTGCAAAGGAGAAACAGTTTTGT 60.382 41.667 0.00 0.00 39.87 2.83
445 446 4.743493 TGCAAAGGAGAAACAGTTTTGTC 58.257 39.130 0.00 0.71 36.23 3.18
446 447 4.219507 TGCAAAGGAGAAACAGTTTTGTCA 59.780 37.500 0.00 0.00 36.85 3.58
447 448 5.105392 TGCAAAGGAGAAACAGTTTTGTCAT 60.105 36.000 0.00 0.00 36.85 3.06
448 449 5.812127 GCAAAGGAGAAACAGTTTTGTCATT 59.188 36.000 0.00 2.14 39.80 2.57
449 450 6.978080 GCAAAGGAGAAACAGTTTTGTCATTA 59.022 34.615 0.00 0.00 37.85 1.90
450 451 7.491048 GCAAAGGAGAAACAGTTTTGTCATTAA 59.509 33.333 0.00 0.00 37.85 1.40
451 452 9.364989 CAAAGGAGAAACAGTTTTGTCATTAAA 57.635 29.630 0.00 0.00 37.85 1.52
452 453 9.936759 AAAGGAGAAACAGTTTTGTCATTAAAA 57.063 25.926 0.00 0.00 37.85 1.52
453 454 9.936759 AAGGAGAAACAGTTTTGTCATTAAAAA 57.063 25.926 0.00 0.00 37.27 1.94
454 455 9.366216 AGGAGAAACAGTTTTGTCATTAAAAAC 57.634 29.630 0.00 4.08 44.29 2.43
455 456 9.145865 GGAGAAACAGTTTTGTCATTAAAAACA 57.854 29.630 12.69 0.00 45.66 2.83
461 462 9.429359 ACAGTTTTGTCATTAAAAACAACATCA 57.571 25.926 12.69 0.00 45.66 3.07
468 469 9.190858 TGTCATTAAAAACAACATCATTAGTGC 57.809 29.630 0.00 0.00 0.00 4.40
469 470 9.190858 GTCATTAAAAACAACATCATTAGTGCA 57.809 29.630 0.00 0.00 0.00 4.57
470 471 9.755804 TCATTAAAAACAACATCATTAGTGCAA 57.244 25.926 0.00 0.00 0.00 4.08
528 529 4.415881 AACATGTGAACACTGGTGAGTA 57.584 40.909 0.00 0.00 0.00 2.59
529 530 3.728845 ACATGTGAACACTGGTGAGTAC 58.271 45.455 7.78 3.99 0.00 2.73
530 531 3.388024 ACATGTGAACACTGGTGAGTACT 59.612 43.478 7.78 0.00 0.00 2.73
531 532 3.728076 TGTGAACACTGGTGAGTACTC 57.272 47.619 16.32 16.32 0.00 2.59
532 533 2.364324 TGTGAACACTGGTGAGTACTCC 59.636 50.000 20.11 11.08 0.00 3.85
533 534 1.968493 TGAACACTGGTGAGTACTCCC 59.032 52.381 20.11 19.17 0.00 4.30
534 535 2.249139 GAACACTGGTGAGTACTCCCT 58.751 52.381 20.11 4.88 0.00 4.20
535 536 1.926108 ACACTGGTGAGTACTCCCTC 58.074 55.000 20.11 10.25 0.00 4.30
536 537 1.187087 CACTGGTGAGTACTCCCTCC 58.813 60.000 20.11 18.14 0.00 4.30
537 538 0.323542 ACTGGTGAGTACTCCCTCCG 60.324 60.000 20.11 15.70 0.00 4.63
538 539 0.323542 CTGGTGAGTACTCCCTCCGT 60.324 60.000 20.11 0.00 0.00 4.69
539 540 0.323178 TGGTGAGTACTCCCTCCGTC 60.323 60.000 20.11 0.00 0.00 4.79
540 541 1.036481 GGTGAGTACTCCCTCCGTCC 61.036 65.000 20.11 7.40 0.00 4.79
541 542 1.077930 TGAGTACTCCCTCCGTCCG 60.078 63.158 20.11 0.00 0.00 4.79
542 543 1.222936 GAGTACTCCCTCCGTCCGA 59.777 63.158 12.13 0.00 0.00 4.55
543 544 0.393537 GAGTACTCCCTCCGTCCGAA 60.394 60.000 12.13 0.00 0.00 4.30
544 545 0.038744 AGTACTCCCTCCGTCCGAAA 59.961 55.000 0.00 0.00 0.00 3.46
545 546 0.890683 GTACTCCCTCCGTCCGAAAA 59.109 55.000 0.00 0.00 0.00 2.29
546 547 1.479730 GTACTCCCTCCGTCCGAAAAT 59.520 52.381 0.00 0.00 0.00 1.82
547 548 1.856629 ACTCCCTCCGTCCGAAAATA 58.143 50.000 0.00 0.00 0.00 1.40
548 549 1.479730 ACTCCCTCCGTCCGAAAATAC 59.520 52.381 0.00 0.00 0.00 1.89
549 550 1.755380 CTCCCTCCGTCCGAAAATACT 59.245 52.381 0.00 0.00 0.00 2.12
550 551 2.167900 CTCCCTCCGTCCGAAAATACTT 59.832 50.000 0.00 0.00 0.00 2.24
551 552 2.093869 TCCCTCCGTCCGAAAATACTTG 60.094 50.000 0.00 0.00 0.00 3.16
552 553 2.354403 CCCTCCGTCCGAAAATACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
553 554 2.928116 CCTCCGTCCGAAAATACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
554 555 3.581755 CTCCGTCCGAAAATACTTGTCA 58.418 45.455 0.00 0.00 0.00 3.58
555 556 4.181578 CTCCGTCCGAAAATACTTGTCAT 58.818 43.478 0.00 0.00 0.00 3.06
556 557 4.178540 TCCGTCCGAAAATACTTGTCATC 58.821 43.478 0.00 0.00 0.00 2.92
557 558 3.930229 CCGTCCGAAAATACTTGTCATCA 59.070 43.478 0.00 0.00 0.00 3.07
558 559 4.390603 CCGTCCGAAAATACTTGTCATCAA 59.609 41.667 0.00 0.00 0.00 2.57
559 560 5.106869 CCGTCCGAAAATACTTGTCATCAAA 60.107 40.000 0.00 0.00 32.87 2.69
560 561 6.367421 CGTCCGAAAATACTTGTCATCAAAA 58.633 36.000 0.00 0.00 32.87 2.44
561 562 7.021196 CGTCCGAAAATACTTGTCATCAAAAT 58.979 34.615 0.00 0.00 32.87 1.82
562 563 7.007367 CGTCCGAAAATACTTGTCATCAAAATG 59.993 37.037 0.00 0.00 32.87 2.32
563 564 7.273381 GTCCGAAAATACTTGTCATCAAAATGG 59.727 37.037 0.00 0.00 33.42 3.16
564 565 7.175816 TCCGAAAATACTTGTCATCAAAATGGA 59.824 33.333 0.00 0.00 33.42 3.41
565 566 7.273381 CCGAAAATACTTGTCATCAAAATGGAC 59.727 37.037 0.00 0.00 33.42 4.02
566 567 7.807433 CGAAAATACTTGTCATCAAAATGGACA 59.193 33.333 0.00 0.00 33.42 4.02
567 568 9.474920 GAAAATACTTGTCATCAAAATGGACAA 57.525 29.630 0.00 0.00 34.59 3.18
568 569 9.829507 AAAATACTTGTCATCAAAATGGACAAA 57.170 25.926 7.70 0.00 34.98 2.83
569 570 9.829507 AAATACTTGTCATCAAAATGGACAAAA 57.170 25.926 7.70 0.84 34.98 2.44
570 571 9.829507 AATACTTGTCATCAAAATGGACAAAAA 57.170 25.926 7.70 0.55 34.98 1.94
571 572 7.775397 ACTTGTCATCAAAATGGACAAAAAG 57.225 32.000 7.70 0.11 34.98 2.27
572 573 6.762661 ACTTGTCATCAAAATGGACAAAAAGG 59.237 34.615 7.70 0.11 34.98 3.11
573 574 5.609423 TGTCATCAAAATGGACAAAAAGGG 58.391 37.500 0.00 0.00 33.42 3.95
574 575 5.365025 TGTCATCAAAATGGACAAAAAGGGA 59.635 36.000 0.00 0.00 33.42 4.20
575 576 6.043012 TGTCATCAAAATGGACAAAAAGGGAT 59.957 34.615 0.00 0.00 33.42 3.85
576 577 6.369615 GTCATCAAAATGGACAAAAAGGGATG 59.630 38.462 0.00 0.00 33.42 3.51
577 578 5.885449 TCAAAATGGACAAAAAGGGATGT 57.115 34.783 0.00 0.00 0.00 3.06
578 579 6.985653 TCAAAATGGACAAAAAGGGATGTA 57.014 33.333 0.00 0.00 0.00 2.29
579 580 7.552050 TCAAAATGGACAAAAAGGGATGTAT 57.448 32.000 0.00 0.00 0.00 2.29
580 581 7.610865 TCAAAATGGACAAAAAGGGATGTATC 58.389 34.615 0.00 0.00 0.00 2.24
581 582 7.454380 TCAAAATGGACAAAAAGGGATGTATCT 59.546 33.333 0.00 0.00 0.00 1.98
582 583 8.748412 CAAAATGGACAAAAAGGGATGTATCTA 58.252 33.333 0.00 0.00 0.00 1.98
583 584 8.525290 AAATGGACAAAAAGGGATGTATCTAG 57.475 34.615 0.00 0.00 0.00 2.43
584 585 6.884472 TGGACAAAAAGGGATGTATCTAGA 57.116 37.500 0.00 0.00 0.00 2.43
585 586 7.265599 TGGACAAAAAGGGATGTATCTAGAA 57.734 36.000 0.00 0.00 0.00 2.10
586 587 7.110155 TGGACAAAAAGGGATGTATCTAGAAC 58.890 38.462 0.00 0.00 0.00 3.01
587 588 7.037586 TGGACAAAAAGGGATGTATCTAGAACT 60.038 37.037 0.00 0.00 0.00 3.01
588 589 8.483758 GGACAAAAAGGGATGTATCTAGAACTA 58.516 37.037 0.00 0.00 0.00 2.24
589 590 9.886132 GACAAAAAGGGATGTATCTAGAACTAA 57.114 33.333 0.00 0.00 0.00 2.24
640 641 6.435430 TCATTTGATGACAAGTATTTCCGG 57.565 37.500 0.00 0.00 37.32 5.14
641 642 6.176896 TCATTTGATGACAAGTATTTCCGGA 58.823 36.000 0.00 0.00 37.32 5.14
642 643 5.873179 TTTGATGACAAGTATTTCCGGAC 57.127 39.130 1.83 0.00 37.32 4.79
643 644 3.517602 TGATGACAAGTATTTCCGGACG 58.482 45.455 1.83 0.00 0.00 4.79
644 645 3.056393 TGATGACAAGTATTTCCGGACGT 60.056 43.478 1.83 0.00 0.00 4.34
645 646 4.158209 TGATGACAAGTATTTCCGGACGTA 59.842 41.667 1.83 0.00 0.00 3.57
646 647 4.724074 TGACAAGTATTTCCGGACGTAT 57.276 40.909 1.83 0.20 0.00 3.06
647 648 4.426416 TGACAAGTATTTCCGGACGTATG 58.574 43.478 1.83 1.26 0.00 2.39
648 649 4.158209 TGACAAGTATTTCCGGACGTATGA 59.842 41.667 1.83 0.00 0.00 2.15
649 650 5.075858 ACAAGTATTTCCGGACGTATGAA 57.924 39.130 1.83 0.00 0.00 2.57
650 651 5.107133 ACAAGTATTTCCGGACGTATGAAG 58.893 41.667 1.83 0.00 0.00 3.02
651 652 4.996788 AGTATTTCCGGACGTATGAAGT 57.003 40.909 1.83 0.00 0.00 3.01
664 671 7.149080 CGGACGTATGAAGTATAACATTAACCG 60.149 40.741 0.00 0.00 0.00 4.44
668 675 9.630098 CGTATGAAGTATAACATTAACCGGTAT 57.370 33.333 8.00 0.00 0.00 2.73
702 709 9.000486 GGTAGTGCAAATTTAGAAGGATATACC 58.000 37.037 0.00 0.00 39.35 2.73
752 759 8.649841 GTTAAGCAATGACAGTGTATACGTTTA 58.350 33.333 4.63 0.00 0.00 2.01
757 764 7.148540 GCAATGACAGTGTATACGTTTAAGGAA 60.149 37.037 4.63 0.00 0.00 3.36
806 814 3.423996 TGTAAAACCAGCAAACGAACC 57.576 42.857 0.00 0.00 0.00 3.62
807 815 3.018149 TGTAAAACCAGCAAACGAACCT 58.982 40.909 0.00 0.00 0.00 3.50
808 816 3.444388 TGTAAAACCAGCAAACGAACCTT 59.556 39.130 0.00 0.00 0.00 3.50
809 817 4.639310 TGTAAAACCAGCAAACGAACCTTA 59.361 37.500 0.00 0.00 0.00 2.69
852 902 4.227134 CATCGCCGGACCAGGAGG 62.227 72.222 5.05 0.00 42.21 4.30
941 1004 1.005630 CATCCACCGCCTAGCTAGC 60.006 63.158 15.74 6.62 0.00 3.42
970 1033 3.751049 TATCTTCTCCGGCCGGCCT 62.751 63.158 41.01 23.48 34.68 5.19
1047 1112 0.457166 TGTACATGTACAGCGCCGTC 60.457 55.000 30.31 6.05 40.77 4.79
1408 1473 2.202623 GCCTGCACGTCCTACTCG 60.203 66.667 0.00 0.00 0.00 4.18
1557 1629 5.715070 CGTGAGGAGATCTTTGAGTACTTT 58.285 41.667 0.00 0.00 0.00 2.66
1946 2111 5.545723 AGCTAGCCAGATCTACCAATTATGT 59.454 40.000 12.13 0.00 0.00 2.29
2051 2267 7.807977 AGATGTGCTTAGAAGAAAAAGTTCA 57.192 32.000 0.00 0.00 36.09 3.18
2111 2337 1.226974 GTCGCCTAGCTCATTCGCA 60.227 57.895 0.00 0.00 0.00 5.10
2207 2467 1.336755 GCATCACCAAAACCTTGACGT 59.663 47.619 0.00 0.00 34.14 4.34
2211 2471 1.066908 CACCAAAACCTTGACGTGCAT 59.933 47.619 0.00 0.00 34.14 3.96
2436 4076 9.496873 TTTAATCCTCTCTCTCTCTATAGTTCG 57.503 37.037 0.00 0.00 0.00 3.95
2564 4208 2.289569 GGCATGGAAGAAACATTTGCCA 60.290 45.455 6.18 0.00 37.36 4.92
2785 8274 6.451393 ACAAGTTTAGTTGTTTGTGCTTGAA 58.549 32.000 0.00 0.00 37.36 2.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
66 67 9.308318 GATAATAAAAGCGCCCTTTATCAAAAA 57.692 29.630 19.70 8.60 40.30 1.94
67 68 8.691797 AGATAATAAAAGCGCCCTTTATCAAAA 58.308 29.630 19.70 10.31 40.30 2.44
68 69 8.232913 AGATAATAAAAGCGCCCTTTATCAAA 57.767 30.769 19.70 12.05 40.30 2.69
69 70 7.500892 TGAGATAATAAAAGCGCCCTTTATCAA 59.499 33.333 19.70 13.80 40.30 2.57
70 71 6.995686 TGAGATAATAAAAGCGCCCTTTATCA 59.004 34.615 19.70 13.57 40.30 2.15
71 72 7.435068 TGAGATAATAAAAGCGCCCTTTATC 57.565 36.000 19.70 16.57 40.30 1.75
72 73 7.817418 TTGAGATAATAAAAGCGCCCTTTAT 57.183 32.000 15.73 15.73 40.30 1.40
73 74 7.633193 TTTGAGATAATAAAAGCGCCCTTTA 57.367 32.000 2.29 9.36 40.30 1.85
74 75 6.524101 TTTGAGATAATAAAAGCGCCCTTT 57.476 33.333 2.29 7.08 42.93 3.11
75 76 6.524101 TTTTGAGATAATAAAAGCGCCCTT 57.476 33.333 2.29 0.00 0.00 3.95
76 77 6.096846 ACATTTTGAGATAATAAAAGCGCCCT 59.903 34.615 2.29 0.00 0.00 5.19
77 78 6.273071 ACATTTTGAGATAATAAAAGCGCCC 58.727 36.000 2.29 0.00 0.00 6.13
78 79 7.113544 GCTACATTTTGAGATAATAAAAGCGCC 59.886 37.037 2.29 0.00 0.00 6.53
79 80 7.643764 TGCTACATTTTGAGATAATAAAAGCGC 59.356 33.333 0.00 0.00 0.00 5.92
80 81 9.669353 ATGCTACATTTTGAGATAATAAAAGCG 57.331 29.630 0.00 0.00 0.00 4.68
87 88 9.053840 CACTCTGATGCTACATTTTGAGATAAT 57.946 33.333 0.00 0.00 0.00 1.28
88 89 8.260114 TCACTCTGATGCTACATTTTGAGATAA 58.740 33.333 0.00 0.00 0.00 1.75
89 90 7.785033 TCACTCTGATGCTACATTTTGAGATA 58.215 34.615 0.00 0.00 0.00 1.98
90 91 6.647229 TCACTCTGATGCTACATTTTGAGAT 58.353 36.000 0.00 0.00 0.00 2.75
91 92 6.041423 TCACTCTGATGCTACATTTTGAGA 57.959 37.500 0.00 0.00 0.00 3.27
92 93 6.922247 ATCACTCTGATGCTACATTTTGAG 57.078 37.500 0.00 0.00 35.43 3.02
93 94 7.330262 TGTATCACTCTGATGCTACATTTTGA 58.670 34.615 2.61 0.00 39.71 2.69
94 95 7.543947 TGTATCACTCTGATGCTACATTTTG 57.456 36.000 2.61 0.00 39.71 2.44
95 96 8.565896 TTTGTATCACTCTGATGCTACATTTT 57.434 30.769 2.61 0.00 39.71 1.82
96 97 7.201679 GCTTTGTATCACTCTGATGCTACATTT 60.202 37.037 2.61 0.00 39.71 2.32
97 98 6.259608 GCTTTGTATCACTCTGATGCTACATT 59.740 38.462 2.61 0.00 39.71 2.71
98 99 5.757320 GCTTTGTATCACTCTGATGCTACAT 59.243 40.000 2.61 0.00 39.71 2.29
99 100 5.111989 GCTTTGTATCACTCTGATGCTACA 58.888 41.667 2.61 0.00 39.71 2.74
100 101 5.111989 TGCTTTGTATCACTCTGATGCTAC 58.888 41.667 2.61 0.00 39.71 3.58
101 102 5.343307 TGCTTTGTATCACTCTGATGCTA 57.657 39.130 2.61 0.00 39.71 3.49
102 103 4.212143 TGCTTTGTATCACTCTGATGCT 57.788 40.909 2.61 0.00 39.71 3.79
103 104 5.496133 AATGCTTTGTATCACTCTGATGC 57.504 39.130 0.00 0.00 37.70 3.91
104 105 8.429493 TCTTAATGCTTTGTATCACTCTGATG 57.571 34.615 0.00 0.00 37.70 3.07
105 106 8.263640 ACTCTTAATGCTTTGTATCACTCTGAT 58.736 33.333 0.00 0.00 40.72 2.90
106 107 7.615403 ACTCTTAATGCTTTGTATCACTCTGA 58.385 34.615 0.00 0.00 0.00 3.27
107 108 7.840342 ACTCTTAATGCTTTGTATCACTCTG 57.160 36.000 0.00 0.00 0.00 3.35
108 109 9.757227 GATACTCTTAATGCTTTGTATCACTCT 57.243 33.333 12.14 0.00 37.36 3.24
109 110 9.534565 TGATACTCTTAATGCTTTGTATCACTC 57.465 33.333 14.27 0.23 40.32 3.51
112 113 7.715249 GGGTGATACTCTTAATGCTTTGTATCA 59.285 37.037 14.27 14.27 41.84 2.15
113 114 7.095607 CGGGTGATACTCTTAATGCTTTGTATC 60.096 40.741 10.94 10.94 37.69 2.24
114 115 6.706270 CGGGTGATACTCTTAATGCTTTGTAT 59.294 38.462 0.00 0.00 0.00 2.29
115 116 6.046593 CGGGTGATACTCTTAATGCTTTGTA 58.953 40.000 0.00 0.00 0.00 2.41
116 117 4.876107 CGGGTGATACTCTTAATGCTTTGT 59.124 41.667 0.00 0.00 0.00 2.83
117 118 4.273480 CCGGGTGATACTCTTAATGCTTTG 59.727 45.833 0.00 0.00 0.00 2.77
118 119 4.451900 CCGGGTGATACTCTTAATGCTTT 58.548 43.478 0.00 0.00 0.00 3.51
119 120 3.744530 GCCGGGTGATACTCTTAATGCTT 60.745 47.826 2.18 0.00 0.00 3.91
120 121 2.224305 GCCGGGTGATACTCTTAATGCT 60.224 50.000 2.18 0.00 0.00 3.79
121 122 2.143925 GCCGGGTGATACTCTTAATGC 58.856 52.381 2.18 0.00 0.00 3.56
122 123 2.368875 AGGCCGGGTGATACTCTTAATG 59.631 50.000 2.18 0.00 0.00 1.90
123 124 2.633481 GAGGCCGGGTGATACTCTTAAT 59.367 50.000 2.18 0.00 0.00 1.40
124 125 2.037144 GAGGCCGGGTGATACTCTTAA 58.963 52.381 2.18 0.00 0.00 1.85
125 126 1.217183 AGAGGCCGGGTGATACTCTTA 59.783 52.381 2.18 0.00 35.10 2.10
126 127 0.032017 AGAGGCCGGGTGATACTCTT 60.032 55.000 2.18 0.00 35.10 2.85
127 128 0.757188 CAGAGGCCGGGTGATACTCT 60.757 60.000 2.18 0.00 38.96 3.24
128 129 1.742768 CAGAGGCCGGGTGATACTC 59.257 63.158 2.18 0.00 0.00 2.59
129 130 2.435693 GCAGAGGCCGGGTGATACT 61.436 63.158 2.18 0.00 0.00 2.12
130 131 2.044806 ATGCAGAGGCCGGGTGATAC 62.045 60.000 2.18 0.00 40.13 2.24
131 132 0.471022 TATGCAGAGGCCGGGTGATA 60.471 55.000 2.18 0.00 40.13 2.15
132 133 1.344953 TTATGCAGAGGCCGGGTGAT 61.345 55.000 2.18 0.00 40.13 3.06
133 134 1.992834 TTATGCAGAGGCCGGGTGA 60.993 57.895 2.18 0.00 40.13 4.02
134 135 1.819632 GTTATGCAGAGGCCGGGTG 60.820 63.158 2.18 0.00 40.13 4.61
135 136 0.689745 TAGTTATGCAGAGGCCGGGT 60.690 55.000 2.18 0.00 40.13 5.28
136 137 0.034059 CTAGTTATGCAGAGGCCGGG 59.966 60.000 2.18 0.00 40.13 5.73
137 138 0.034059 CCTAGTTATGCAGAGGCCGG 59.966 60.000 0.00 0.00 40.13 6.13
138 139 1.040646 TCCTAGTTATGCAGAGGCCG 58.959 55.000 0.00 0.00 40.13 6.13
139 140 3.051081 CATCCTAGTTATGCAGAGGCC 57.949 52.381 0.00 0.00 40.13 5.19
147 148 2.874701 GGCTGTGTGCATCCTAGTTATG 59.125 50.000 0.00 0.00 45.15 1.90
148 149 2.505407 TGGCTGTGTGCATCCTAGTTAT 59.495 45.455 0.00 0.00 45.15 1.89
149 150 1.905894 TGGCTGTGTGCATCCTAGTTA 59.094 47.619 0.00 0.00 45.15 2.24
150 151 0.692476 TGGCTGTGTGCATCCTAGTT 59.308 50.000 0.00 0.00 45.15 2.24
151 152 0.692476 TTGGCTGTGTGCATCCTAGT 59.308 50.000 0.00 0.00 45.15 2.57
152 153 1.470098 GTTTGGCTGTGTGCATCCTAG 59.530 52.381 0.00 0.00 45.15 3.02
153 154 1.202867 TGTTTGGCTGTGTGCATCCTA 60.203 47.619 0.00 0.00 45.15 2.94
154 155 0.467844 TGTTTGGCTGTGTGCATCCT 60.468 50.000 0.00 0.00 45.15 3.24
155 156 0.318955 GTGTTTGGCTGTGTGCATCC 60.319 55.000 0.00 0.00 45.15 3.51
156 157 0.318955 GGTGTTTGGCTGTGTGCATC 60.319 55.000 0.00 0.00 45.15 3.91
157 158 1.042003 TGGTGTTTGGCTGTGTGCAT 61.042 50.000 0.00 0.00 45.15 3.96
158 159 1.042003 ATGGTGTTTGGCTGTGTGCA 61.042 50.000 0.00 0.00 45.15 4.57
159 160 0.104671 AATGGTGTTTGGCTGTGTGC 59.895 50.000 0.00 0.00 41.94 4.57
160 161 2.622942 ACTAATGGTGTTTGGCTGTGTG 59.377 45.455 0.00 0.00 0.00 3.82
161 162 2.884639 GACTAATGGTGTTTGGCTGTGT 59.115 45.455 0.00 0.00 0.00 3.72
162 163 3.058016 CAGACTAATGGTGTTTGGCTGTG 60.058 47.826 0.00 0.00 0.00 3.66
163 164 3.149196 CAGACTAATGGTGTTTGGCTGT 58.851 45.455 0.00 0.00 0.00 4.40
164 165 3.411446 TCAGACTAATGGTGTTTGGCTG 58.589 45.455 0.00 0.00 0.00 4.85
165 166 3.788227 TCAGACTAATGGTGTTTGGCT 57.212 42.857 0.00 0.00 0.00 4.75
166 167 6.509418 TTTATCAGACTAATGGTGTTTGGC 57.491 37.500 0.00 0.00 0.00 4.52
167 168 9.613428 TCTATTTATCAGACTAATGGTGTTTGG 57.387 33.333 0.00 0.00 0.00 3.28
207 208 4.745620 GGACTCTACTATTGCCGAATTGTC 59.254 45.833 0.00 0.00 31.20 3.18
208 209 4.161565 TGGACTCTACTATTGCCGAATTGT 59.838 41.667 0.00 0.00 33.02 2.71
209 210 4.693283 TGGACTCTACTATTGCCGAATTG 58.307 43.478 0.00 0.00 0.00 2.32
210 211 5.552870 ATGGACTCTACTATTGCCGAATT 57.447 39.130 0.00 0.00 0.00 2.17
211 212 6.010850 TCTATGGACTCTACTATTGCCGAAT 58.989 40.000 0.00 0.00 0.00 3.34
212 213 5.241064 GTCTATGGACTCTACTATTGCCGAA 59.759 44.000 1.27 0.00 39.24 4.30
213 214 4.760715 GTCTATGGACTCTACTATTGCCGA 59.239 45.833 1.27 0.00 39.24 5.54
214 215 4.082679 GGTCTATGGACTCTACTATTGCCG 60.083 50.000 9.27 0.00 41.82 5.69
215 216 4.082679 CGGTCTATGGACTCTACTATTGCC 60.083 50.000 9.27 0.00 41.82 4.52
216 217 4.760715 TCGGTCTATGGACTCTACTATTGC 59.239 45.833 9.27 0.00 41.82 3.56
217 218 5.763698 TGTCGGTCTATGGACTCTACTATTG 59.236 44.000 9.27 0.00 41.82 1.90
218 219 5.764192 GTGTCGGTCTATGGACTCTACTATT 59.236 44.000 9.27 0.00 41.82 1.73
219 220 5.072058 AGTGTCGGTCTATGGACTCTACTAT 59.928 44.000 9.27 0.00 41.82 2.12
220 221 4.408270 AGTGTCGGTCTATGGACTCTACTA 59.592 45.833 9.27 0.00 41.82 1.82
221 222 3.200385 AGTGTCGGTCTATGGACTCTACT 59.800 47.826 9.27 6.23 41.82 2.57
222 223 3.543665 AGTGTCGGTCTATGGACTCTAC 58.456 50.000 9.27 5.82 41.82 2.59
223 224 3.928005 AGTGTCGGTCTATGGACTCTA 57.072 47.619 9.27 0.00 41.82 2.43
224 225 2.810870 AGTGTCGGTCTATGGACTCT 57.189 50.000 9.27 0.00 41.82 3.24
225 226 3.304794 GCATAGTGTCGGTCTATGGACTC 60.305 52.174 9.27 0.00 42.63 3.36
226 227 2.623889 GCATAGTGTCGGTCTATGGACT 59.376 50.000 9.27 0.00 42.63 3.85
227 228 2.288273 GGCATAGTGTCGGTCTATGGAC 60.288 54.545 17.21 0.00 42.63 4.02
228 229 1.961394 GGCATAGTGTCGGTCTATGGA 59.039 52.381 17.21 0.00 42.63 3.41
229 230 1.964223 AGGCATAGTGTCGGTCTATGG 59.036 52.381 17.21 6.27 42.63 2.74
230 231 4.218635 ACATAGGCATAGTGTCGGTCTATG 59.781 45.833 10.07 10.07 44.18 2.23
231 232 4.408276 ACATAGGCATAGTGTCGGTCTAT 58.592 43.478 0.00 0.00 0.00 1.98
232 233 3.819337 GACATAGGCATAGTGTCGGTCTA 59.181 47.826 5.60 0.00 33.73 2.59
233 234 2.623889 GACATAGGCATAGTGTCGGTCT 59.376 50.000 5.60 0.00 33.73 3.85
234 235 3.014604 GACATAGGCATAGTGTCGGTC 57.985 52.381 5.60 0.00 33.73 4.79
238 239 5.810587 TCTTTTTCGACATAGGCATAGTGTC 59.189 40.000 9.48 9.48 39.02 3.67
239 240 5.730550 TCTTTTTCGACATAGGCATAGTGT 58.269 37.500 0.00 0.00 0.00 3.55
240 241 6.293081 CCATCTTTTTCGACATAGGCATAGTG 60.293 42.308 0.00 0.00 0.00 2.74
241 242 5.760253 CCATCTTTTTCGACATAGGCATAGT 59.240 40.000 0.00 0.00 0.00 2.12
242 243 5.760253 ACCATCTTTTTCGACATAGGCATAG 59.240 40.000 0.00 0.00 0.00 2.23
243 244 5.527214 CACCATCTTTTTCGACATAGGCATA 59.473 40.000 0.00 0.00 0.00 3.14
244 245 4.336433 CACCATCTTTTTCGACATAGGCAT 59.664 41.667 0.00 0.00 0.00 4.40
245 246 3.689161 CACCATCTTTTTCGACATAGGCA 59.311 43.478 0.00 0.00 0.00 4.75
246 247 3.065371 CCACCATCTTTTTCGACATAGGC 59.935 47.826 0.00 0.00 0.00 3.93
247 248 4.332819 GTCCACCATCTTTTTCGACATAGG 59.667 45.833 0.00 0.00 0.00 2.57
248 249 4.332819 GGTCCACCATCTTTTTCGACATAG 59.667 45.833 0.00 0.00 35.64 2.23
249 250 4.258543 GGTCCACCATCTTTTTCGACATA 58.741 43.478 0.00 0.00 35.64 2.29
250 251 3.081804 GGTCCACCATCTTTTTCGACAT 58.918 45.455 0.00 0.00 35.64 3.06
251 252 2.500229 GGTCCACCATCTTTTTCGACA 58.500 47.619 0.00 0.00 35.64 4.35
252 253 1.463444 CGGTCCACCATCTTTTTCGAC 59.537 52.381 0.00 0.00 35.14 4.20
253 254 1.345089 TCGGTCCACCATCTTTTTCGA 59.655 47.619 0.00 0.00 35.14 3.71
254 255 1.732259 CTCGGTCCACCATCTTTTTCG 59.268 52.381 0.00 0.00 35.14 3.46
255 256 1.468914 GCTCGGTCCACCATCTTTTTC 59.531 52.381 0.00 0.00 35.14 2.29
256 257 1.534729 GCTCGGTCCACCATCTTTTT 58.465 50.000 0.00 0.00 35.14 1.94
257 258 0.322546 GGCTCGGTCCACCATCTTTT 60.323 55.000 0.00 0.00 35.14 2.27
258 259 1.299976 GGCTCGGTCCACCATCTTT 59.700 57.895 0.00 0.00 35.14 2.52
259 260 2.990479 GGCTCGGTCCACCATCTT 59.010 61.111 0.00 0.00 35.14 2.40
260 261 3.461773 CGGCTCGGTCCACCATCT 61.462 66.667 0.00 0.00 35.14 2.90
261 262 4.530857 CCGGCTCGGTCCACCATC 62.531 72.222 5.56 0.00 42.73 3.51
271 272 1.287730 GCAGCATAATCTCCGGCTCG 61.288 60.000 0.00 0.00 33.60 5.03
272 273 0.034616 AGCAGCATAATCTCCGGCTC 59.965 55.000 0.00 0.00 33.60 4.70
273 274 1.342074 TAGCAGCATAATCTCCGGCT 58.658 50.000 0.00 0.00 36.99 5.52
274 275 2.275318 GATAGCAGCATAATCTCCGGC 58.725 52.381 0.00 0.00 0.00 6.13
275 276 2.234661 TGGATAGCAGCATAATCTCCGG 59.765 50.000 0.00 0.00 0.00 5.14
276 277 3.599730 TGGATAGCAGCATAATCTCCG 57.400 47.619 0.00 0.00 0.00 4.63
277 278 4.841422 ACATGGATAGCAGCATAATCTCC 58.159 43.478 0.00 0.00 0.00 3.71
278 279 5.123502 CCAACATGGATAGCAGCATAATCTC 59.876 44.000 0.00 0.00 40.96 2.75
279 280 5.008331 CCAACATGGATAGCAGCATAATCT 58.992 41.667 0.00 0.00 40.96 2.40
280 281 4.157289 CCCAACATGGATAGCAGCATAATC 59.843 45.833 0.00 0.00 40.96 1.75
281 282 4.084287 CCCAACATGGATAGCAGCATAAT 58.916 43.478 0.00 0.00 40.96 1.28
282 283 3.117550 ACCCAACATGGATAGCAGCATAA 60.118 43.478 0.00 0.00 40.96 1.90
283 284 2.442878 ACCCAACATGGATAGCAGCATA 59.557 45.455 0.00 0.00 40.96 3.14
284 285 1.216175 ACCCAACATGGATAGCAGCAT 59.784 47.619 0.00 0.00 40.96 3.79
285 286 0.625316 ACCCAACATGGATAGCAGCA 59.375 50.000 0.00 0.00 40.96 4.41
286 287 2.638480 TACCCAACATGGATAGCAGC 57.362 50.000 0.00 0.00 40.96 5.25
287 288 5.394115 GGTTTTTACCCAACATGGATAGCAG 60.394 44.000 0.00 0.00 40.96 4.24
288 289 4.464597 GGTTTTTACCCAACATGGATAGCA 59.535 41.667 0.00 0.00 40.96 3.49
289 290 4.709886 AGGTTTTTACCCAACATGGATAGC 59.290 41.667 0.00 0.00 40.96 2.97
290 291 6.404293 CGAAGGTTTTTACCCAACATGGATAG 60.404 42.308 0.00 0.00 40.96 2.08
291 292 5.416326 CGAAGGTTTTTACCCAACATGGATA 59.584 40.000 0.00 0.00 40.96 2.59
292 293 4.219725 CGAAGGTTTTTACCCAACATGGAT 59.780 41.667 0.00 0.00 40.96 3.41
293 294 3.570550 CGAAGGTTTTTACCCAACATGGA 59.429 43.478 0.00 0.00 40.96 3.41
294 295 3.319689 ACGAAGGTTTTTACCCAACATGG 59.680 43.478 0.00 0.00 37.25 3.66
295 296 4.577834 ACGAAGGTTTTTACCCAACATG 57.422 40.909 0.00 0.00 0.00 3.21
296 297 4.216902 GCTACGAAGGTTTTTACCCAACAT 59.783 41.667 0.00 0.00 0.00 2.71
297 298 3.565063 GCTACGAAGGTTTTTACCCAACA 59.435 43.478 0.00 0.00 0.00 3.33
298 299 3.058016 GGCTACGAAGGTTTTTACCCAAC 60.058 47.826 0.00 0.00 0.00 3.77
299 300 3.148412 GGCTACGAAGGTTTTTACCCAA 58.852 45.455 0.00 0.00 0.00 4.12
300 301 2.106166 TGGCTACGAAGGTTTTTACCCA 59.894 45.455 0.00 0.00 0.00 4.51
301 302 2.485426 GTGGCTACGAAGGTTTTTACCC 59.515 50.000 0.00 0.00 0.00 3.69
302 303 3.405831 AGTGGCTACGAAGGTTTTTACC 58.594 45.455 0.00 0.00 0.00 2.85
303 304 4.779987 CAAGTGGCTACGAAGGTTTTTAC 58.220 43.478 0.00 0.00 0.00 2.01
304 305 3.251487 GCAAGTGGCTACGAAGGTTTTTA 59.749 43.478 0.00 0.00 40.25 1.52
305 306 2.034179 GCAAGTGGCTACGAAGGTTTTT 59.966 45.455 0.00 0.00 40.25 1.94
306 307 1.607148 GCAAGTGGCTACGAAGGTTTT 59.393 47.619 0.00 0.00 40.25 2.43
307 308 1.235724 GCAAGTGGCTACGAAGGTTT 58.764 50.000 0.00 0.00 40.25 3.27
308 309 2.928416 GCAAGTGGCTACGAAGGTT 58.072 52.632 0.00 0.00 40.25 3.50
309 310 4.695560 GCAAGTGGCTACGAAGGT 57.304 55.556 0.00 0.00 40.25 3.50
325 326 1.566018 GGTGTGTACGCTGTTGGAGC 61.566 60.000 8.10 0.00 45.20 4.70
326 327 1.282248 CGGTGTGTACGCTGTTGGAG 61.282 60.000 8.10 0.00 0.00 3.86
327 328 1.300311 CGGTGTGTACGCTGTTGGA 60.300 57.895 8.10 0.00 0.00 3.53
328 329 3.240203 CGGTGTGTACGCTGTTGG 58.760 61.111 8.10 0.00 0.00 3.77
335 336 0.876777 TGTTCAAGGCGGTGTGTACG 60.877 55.000 0.00 0.00 0.00 3.67
336 337 1.463444 GATGTTCAAGGCGGTGTGTAC 59.537 52.381 0.00 0.00 0.00 2.90
337 338 1.803334 GATGTTCAAGGCGGTGTGTA 58.197 50.000 0.00 0.00 0.00 2.90
338 339 1.227999 CGATGTTCAAGGCGGTGTGT 61.228 55.000 0.00 0.00 0.00 3.72
339 340 1.497278 CGATGTTCAAGGCGGTGTG 59.503 57.895 0.00 0.00 0.00 3.82
340 341 1.671054 CCGATGTTCAAGGCGGTGT 60.671 57.895 0.00 0.00 38.99 4.16
341 342 3.177600 CCGATGTTCAAGGCGGTG 58.822 61.111 0.00 0.00 38.99 4.94
344 345 1.234615 ACCAACCGATGTTCAAGGCG 61.235 55.000 0.00 0.00 30.42 5.52
345 346 1.467342 GTACCAACCGATGTTCAAGGC 59.533 52.381 0.00 0.00 30.42 4.35
346 347 2.742053 CAGTACCAACCGATGTTCAAGG 59.258 50.000 0.00 0.00 30.42 3.61
347 348 2.159627 GCAGTACCAACCGATGTTCAAG 59.840 50.000 0.00 0.00 30.42 3.02
348 349 2.147958 GCAGTACCAACCGATGTTCAA 58.852 47.619 0.00 0.00 30.42 2.69
349 350 1.803334 GCAGTACCAACCGATGTTCA 58.197 50.000 0.00 0.00 30.42 3.18
350 351 0.719465 CGCAGTACCAACCGATGTTC 59.281 55.000 0.00 0.00 30.42 3.18
351 352 1.296056 GCGCAGTACCAACCGATGTT 61.296 55.000 0.30 0.00 34.14 2.71
352 353 1.740296 GCGCAGTACCAACCGATGT 60.740 57.895 0.30 0.00 0.00 3.06
353 354 1.019278 AAGCGCAGTACCAACCGATG 61.019 55.000 11.47 0.00 0.00 3.84
354 355 1.019278 CAAGCGCAGTACCAACCGAT 61.019 55.000 11.47 0.00 0.00 4.18
355 356 1.666553 CAAGCGCAGTACCAACCGA 60.667 57.895 11.47 0.00 0.00 4.69
356 357 1.503818 AACAAGCGCAGTACCAACCG 61.504 55.000 11.47 0.00 0.00 4.44
357 358 0.040425 CAACAAGCGCAGTACCAACC 60.040 55.000 11.47 0.00 0.00 3.77
358 359 0.661020 ACAACAAGCGCAGTACCAAC 59.339 50.000 11.47 0.00 0.00 3.77
359 360 2.139917 CTACAACAAGCGCAGTACCAA 58.860 47.619 11.47 0.00 0.00 3.67
360 361 1.790755 CTACAACAAGCGCAGTACCA 58.209 50.000 11.47 0.00 0.00 3.25
361 362 0.442699 GCTACAACAAGCGCAGTACC 59.557 55.000 11.47 0.00 31.76 3.34
362 363 3.949313 GCTACAACAAGCGCAGTAC 57.051 52.632 11.47 0.00 31.76 2.73
369 370 3.748021 GGTGTTCGCTACAACAAGC 57.252 52.632 1.29 0.00 44.23 4.01
373 374 1.453148 GTACGTGGTGTTCGCTACAAC 59.547 52.381 0.00 0.00 45.09 3.32
374 375 1.769733 GTACGTGGTGTTCGCTACAA 58.230 50.000 0.00 0.00 38.80 2.41
375 376 0.385849 CGTACGTGGTGTTCGCTACA 60.386 55.000 7.22 0.00 34.59 2.74
376 377 0.110238 TCGTACGTGGTGTTCGCTAC 60.110 55.000 16.05 0.00 40.68 3.58
377 378 0.590682 TTCGTACGTGGTGTTCGCTA 59.409 50.000 16.05 0.00 40.68 4.26
378 379 0.248990 TTTCGTACGTGGTGTTCGCT 60.249 50.000 16.05 0.00 40.68 4.93
379 380 0.111574 GTTTCGTACGTGGTGTTCGC 60.112 55.000 16.05 0.00 40.68 4.70
380 381 0.157269 CGTTTCGTACGTGGTGTTCG 59.843 55.000 16.05 8.00 45.14 3.95
381 382 3.983771 CGTTTCGTACGTGGTGTTC 57.016 52.632 16.05 0.01 45.14 3.18
398 399 0.854062 TTTTCCGTTGTACGCACTCG 59.146 50.000 0.00 0.00 40.91 4.18
399 400 4.388790 GTTATTTTCCGTTGTACGCACTC 58.611 43.478 0.00 0.00 40.91 3.51
400 401 3.187022 GGTTATTTTCCGTTGTACGCACT 59.813 43.478 0.00 0.00 40.91 4.40
401 402 3.187022 AGGTTATTTTCCGTTGTACGCAC 59.813 43.478 0.00 0.00 40.91 5.34
402 403 3.186817 CAGGTTATTTTCCGTTGTACGCA 59.813 43.478 0.00 0.00 40.91 5.24
403 404 3.739494 CAGGTTATTTTCCGTTGTACGC 58.261 45.455 0.00 0.00 40.91 4.42
404 405 3.186817 TGCAGGTTATTTTCCGTTGTACG 59.813 43.478 0.00 0.00 42.11 3.67
405 406 4.752661 TGCAGGTTATTTTCCGTTGTAC 57.247 40.909 0.00 0.00 0.00 2.90
406 407 5.278561 CCTTTGCAGGTTATTTTCCGTTGTA 60.279 40.000 0.00 0.00 35.06 2.41
407 408 4.500716 CCTTTGCAGGTTATTTTCCGTTGT 60.501 41.667 0.00 0.00 35.06 3.32
408 409 3.987220 CCTTTGCAGGTTATTTTCCGTTG 59.013 43.478 0.00 0.00 35.06 4.10
409 410 3.892588 TCCTTTGCAGGTTATTTTCCGTT 59.107 39.130 0.00 0.00 41.69 4.44
410 411 3.492337 TCCTTTGCAGGTTATTTTCCGT 58.508 40.909 0.00 0.00 41.69 4.69
411 412 3.756434 TCTCCTTTGCAGGTTATTTTCCG 59.244 43.478 0.00 0.00 41.69 4.30
412 413 5.722021 TTCTCCTTTGCAGGTTATTTTCC 57.278 39.130 0.00 0.00 41.69 3.13
413 414 6.512297 TGTTTCTCCTTTGCAGGTTATTTTC 58.488 36.000 0.00 0.00 41.69 2.29
414 415 6.098266 ACTGTTTCTCCTTTGCAGGTTATTTT 59.902 34.615 0.00 0.00 41.69 1.82
415 416 5.598417 ACTGTTTCTCCTTTGCAGGTTATTT 59.402 36.000 0.00 0.00 41.69 1.40
416 417 5.140454 ACTGTTTCTCCTTTGCAGGTTATT 58.860 37.500 0.00 0.00 41.69 1.40
417 418 4.729868 ACTGTTTCTCCTTTGCAGGTTAT 58.270 39.130 0.00 0.00 41.69 1.89
418 419 4.164843 ACTGTTTCTCCTTTGCAGGTTA 57.835 40.909 0.00 0.00 41.69 2.85
419 420 3.018423 ACTGTTTCTCCTTTGCAGGTT 57.982 42.857 0.00 0.00 41.69 3.50
420 421 2.736670 ACTGTTTCTCCTTTGCAGGT 57.263 45.000 0.00 0.00 41.69 4.00
421 422 4.114794 CAAAACTGTTTCTCCTTTGCAGG 58.885 43.478 6.20 0.00 42.50 4.85
422 423 4.747810 ACAAAACTGTTTCTCCTTTGCAG 58.252 39.130 6.20 0.00 31.60 4.41
423 424 4.219507 TGACAAAACTGTTTCTCCTTTGCA 59.780 37.500 6.20 1.04 31.60 4.08
424 425 4.743493 TGACAAAACTGTTTCTCCTTTGC 58.257 39.130 6.20 0.00 31.60 3.68
425 426 8.925161 TTAATGACAAAACTGTTTCTCCTTTG 57.075 30.769 6.20 2.77 34.04 2.77
426 427 9.936759 TTTTAATGACAAAACTGTTTCTCCTTT 57.063 25.926 6.20 5.90 0.00 3.11
427 428 9.936759 TTTTTAATGACAAAACTGTTTCTCCTT 57.063 25.926 6.20 6.49 0.00 3.36
428 429 9.366216 GTTTTTAATGACAAAACTGTTTCTCCT 57.634 29.630 6.20 0.00 39.86 3.69
429 430 9.145865 TGTTTTTAATGACAAAACTGTTTCTCC 57.854 29.630 6.20 0.00 42.33 3.71
435 436 9.429359 TGATGTTGTTTTTAATGACAAAACTGT 57.571 25.926 9.11 0.00 42.33 3.55
442 443 9.190858 GCACTAATGATGTTGTTTTTAATGACA 57.809 29.630 0.00 0.00 0.00 3.58
443 444 9.190858 TGCACTAATGATGTTGTTTTTAATGAC 57.809 29.630 0.00 0.00 0.00 3.06
444 445 9.755804 TTGCACTAATGATGTTGTTTTTAATGA 57.244 25.926 0.00 0.00 0.00 2.57
450 451 9.709495 ACATATTTGCACTAATGATGTTGTTTT 57.291 25.926 8.02 0.00 0.00 2.43
451 452 9.142515 CACATATTTGCACTAATGATGTTGTTT 57.857 29.630 8.02 0.00 0.00 2.83
452 453 8.306038 ACACATATTTGCACTAATGATGTTGTT 58.694 29.630 8.02 0.00 0.00 2.83
453 454 7.829725 ACACATATTTGCACTAATGATGTTGT 58.170 30.769 8.02 0.81 0.00 3.32
454 455 9.955208 ATACACATATTTGCACTAATGATGTTG 57.045 29.630 8.02 0.31 0.00 3.33
455 456 9.955208 CATACACATATTTGCACTAATGATGTT 57.045 29.630 8.02 3.24 0.00 2.71
456 457 9.123902 ACATACACATATTTGCACTAATGATGT 57.876 29.630 8.02 9.82 0.00 3.06
528 529 1.479730 GTATTTTCGGACGGAGGGAGT 59.520 52.381 0.00 0.00 0.00 3.85
529 530 1.755380 AGTATTTTCGGACGGAGGGAG 59.245 52.381 0.00 0.00 0.00 4.30
530 531 1.856629 AGTATTTTCGGACGGAGGGA 58.143 50.000 0.00 0.00 0.00 4.20
531 532 2.277084 CAAGTATTTTCGGACGGAGGG 58.723 52.381 0.00 0.00 0.00 4.30
532 533 2.928116 GACAAGTATTTTCGGACGGAGG 59.072 50.000 0.00 0.00 0.00 4.30
533 534 3.581755 TGACAAGTATTTTCGGACGGAG 58.418 45.455 0.00 0.00 0.00 4.63
534 535 3.663995 TGACAAGTATTTTCGGACGGA 57.336 42.857 0.00 0.00 0.00 4.69
535 536 3.930229 TGATGACAAGTATTTTCGGACGG 59.070 43.478 0.00 0.00 0.00 4.79
536 537 5.524511 TTGATGACAAGTATTTTCGGACG 57.475 39.130 0.00 0.00 0.00 4.79
537 538 7.273381 CCATTTTGATGACAAGTATTTTCGGAC 59.727 37.037 0.00 0.00 37.32 4.79
538 539 7.175816 TCCATTTTGATGACAAGTATTTTCGGA 59.824 33.333 0.00 0.00 37.32 4.55
539 540 7.273381 GTCCATTTTGATGACAAGTATTTTCGG 59.727 37.037 0.00 0.00 37.32 4.30
540 541 7.807433 TGTCCATTTTGATGACAAGTATTTTCG 59.193 33.333 0.00 0.00 37.32 3.46
541 542 9.474920 TTGTCCATTTTGATGACAAGTATTTTC 57.525 29.630 0.00 0.00 37.32 2.29
542 543 9.829507 TTTGTCCATTTTGATGACAAGTATTTT 57.170 25.926 0.00 0.00 37.13 1.82
543 544 9.829507 TTTTGTCCATTTTGATGACAAGTATTT 57.170 25.926 0.00 0.00 37.13 1.40
544 545 9.829507 TTTTTGTCCATTTTGATGACAAGTATT 57.170 25.926 0.00 0.00 37.13 1.89
545 546 9.480053 CTTTTTGTCCATTTTGATGACAAGTAT 57.520 29.630 0.00 0.00 37.13 2.12
546 547 7.925483 CCTTTTTGTCCATTTTGATGACAAGTA 59.075 33.333 0.00 0.00 37.13 2.24
547 548 6.762661 CCTTTTTGTCCATTTTGATGACAAGT 59.237 34.615 0.00 0.00 37.13 3.16
548 549 6.203338 CCCTTTTTGTCCATTTTGATGACAAG 59.797 38.462 0.00 0.00 37.13 3.16
549 550 6.054295 CCCTTTTTGTCCATTTTGATGACAA 58.946 36.000 0.00 0.00 34.47 3.18
550 551 5.365025 TCCCTTTTTGTCCATTTTGATGACA 59.635 36.000 0.00 0.00 0.00 3.58
551 552 5.852827 TCCCTTTTTGTCCATTTTGATGAC 58.147 37.500 0.00 0.00 0.00 3.06
552 553 6.043012 ACATCCCTTTTTGTCCATTTTGATGA 59.957 34.615 0.00 0.00 32.39 2.92
553 554 6.232692 ACATCCCTTTTTGTCCATTTTGATG 58.767 36.000 0.00 0.00 33.80 3.07
554 555 6.438186 ACATCCCTTTTTGTCCATTTTGAT 57.562 33.333 0.00 0.00 0.00 2.57
555 556 5.885449 ACATCCCTTTTTGTCCATTTTGA 57.115 34.783 0.00 0.00 0.00 2.69
556 557 7.614494 AGATACATCCCTTTTTGTCCATTTTG 58.386 34.615 0.00 0.00 0.00 2.44
557 558 7.797121 AGATACATCCCTTTTTGTCCATTTT 57.203 32.000 0.00 0.00 0.00 1.82
558 559 8.336235 TCTAGATACATCCCTTTTTGTCCATTT 58.664 33.333 0.00 0.00 0.00 2.32
559 560 7.872138 TCTAGATACATCCCTTTTTGTCCATT 58.128 34.615 0.00 0.00 0.00 3.16
560 561 7.451731 TCTAGATACATCCCTTTTTGTCCAT 57.548 36.000 0.00 0.00 0.00 3.41
561 562 6.884472 TCTAGATACATCCCTTTTTGTCCA 57.116 37.500 0.00 0.00 0.00 4.02
562 563 7.339482 AGTTCTAGATACATCCCTTTTTGTCC 58.661 38.462 0.00 0.00 0.00 4.02
563 564 9.886132 TTAGTTCTAGATACATCCCTTTTTGTC 57.114 33.333 0.00 0.00 0.00 3.18
614 615 8.620416 CCGGAAATACTTGTCATCAAATGAATA 58.380 33.333 0.00 0.00 41.69 1.75
615 616 7.339212 TCCGGAAATACTTGTCATCAAATGAAT 59.661 33.333 0.00 0.00 41.69 2.57
616 617 6.657117 TCCGGAAATACTTGTCATCAAATGAA 59.343 34.615 0.00 0.00 41.69 2.57
617 618 6.093495 GTCCGGAAATACTTGTCATCAAATGA 59.907 38.462 5.23 0.00 36.84 2.57
618 619 6.258160 GTCCGGAAATACTTGTCATCAAATG 58.742 40.000 5.23 0.00 32.87 2.32
619 620 5.064707 CGTCCGGAAATACTTGTCATCAAAT 59.935 40.000 5.23 0.00 32.87 2.32
620 621 4.390603 CGTCCGGAAATACTTGTCATCAAA 59.609 41.667 5.23 0.00 32.87 2.69
621 622 3.930229 CGTCCGGAAATACTTGTCATCAA 59.070 43.478 5.23 0.00 0.00 2.57
622 623 3.056393 ACGTCCGGAAATACTTGTCATCA 60.056 43.478 5.23 0.00 0.00 3.07
623 624 3.518590 ACGTCCGGAAATACTTGTCATC 58.481 45.455 5.23 0.00 0.00 2.92
624 625 3.604875 ACGTCCGGAAATACTTGTCAT 57.395 42.857 5.23 0.00 0.00 3.06
625 626 4.158209 TCATACGTCCGGAAATACTTGTCA 59.842 41.667 5.23 0.00 0.00 3.58
626 627 4.675510 TCATACGTCCGGAAATACTTGTC 58.324 43.478 5.23 0.00 0.00 3.18
627 628 4.724074 TCATACGTCCGGAAATACTTGT 57.276 40.909 5.23 0.00 0.00 3.16
628 629 5.107133 ACTTCATACGTCCGGAAATACTTG 58.893 41.667 5.23 0.00 0.00 3.16
629 630 5.334724 ACTTCATACGTCCGGAAATACTT 57.665 39.130 5.23 0.00 0.00 2.24
630 631 4.996788 ACTTCATACGTCCGGAAATACT 57.003 40.909 5.23 0.00 0.00 2.12
631 632 7.862372 TGTTATACTTCATACGTCCGGAAATAC 59.138 37.037 5.23 0.00 0.00 1.89
632 633 7.939782 TGTTATACTTCATACGTCCGGAAATA 58.060 34.615 5.23 1.16 0.00 1.40
633 634 6.808829 TGTTATACTTCATACGTCCGGAAAT 58.191 36.000 5.23 0.00 0.00 2.17
634 635 6.206395 TGTTATACTTCATACGTCCGGAAA 57.794 37.500 5.23 0.00 0.00 3.13
635 636 5.833406 TGTTATACTTCATACGTCCGGAA 57.167 39.130 5.23 0.00 0.00 4.30
636 637 6.395426 AATGTTATACTTCATACGTCCGGA 57.605 37.500 0.00 0.00 0.00 5.14
637 638 7.115378 GGTTAATGTTATACTTCATACGTCCGG 59.885 40.741 0.00 0.00 0.00 5.14
638 639 7.149080 CGGTTAATGTTATACTTCATACGTCCG 60.149 40.741 0.00 0.00 0.00 4.79
639 640 7.115378 CCGGTTAATGTTATACTTCATACGTCC 59.885 40.741 0.00 0.00 0.00 4.79
640 641 7.649306 ACCGGTTAATGTTATACTTCATACGTC 59.351 37.037 0.00 0.00 0.00 4.34
641 642 7.491682 ACCGGTTAATGTTATACTTCATACGT 58.508 34.615 0.00 0.00 0.00 3.57
642 643 7.935338 ACCGGTTAATGTTATACTTCATACG 57.065 36.000 0.00 0.00 0.00 3.06
646 647 9.887629 TTTGATACCGGTTAATGTTATACTTCA 57.112 29.630 15.04 0.00 0.00 3.02
806 814 4.515567 AGCGGGAAACAACTCTCTTTTAAG 59.484 41.667 0.00 0.00 0.00 1.85
807 815 4.457466 AGCGGGAAACAACTCTCTTTTAA 58.543 39.130 0.00 0.00 0.00 1.52
808 816 4.081322 AGCGGGAAACAACTCTCTTTTA 57.919 40.909 0.00 0.00 0.00 1.52
809 817 2.932261 AGCGGGAAACAACTCTCTTTT 58.068 42.857 0.00 0.00 0.00 2.27
852 902 3.740452 GCCGGTATTTGTAGGTTCTCCTC 60.740 52.174 1.90 0.00 43.94 3.71
970 1033 3.880490 CTGGTAAGTTGGTTGCTTACACA 59.120 43.478 14.52 10.05 45.94 3.72
1051 1116 4.493747 GAGCCGCTCGTACGCCTT 62.494 66.667 11.24 0.00 0.00 4.35
1306 1371 1.302511 GGTGGAAGGCGAAGAAGCA 60.303 57.895 0.00 0.00 39.27 3.91
1408 1473 0.971447 AGCCCAGTCTCGGACTTACC 60.971 60.000 4.08 0.00 41.37 2.85
1557 1629 4.652822 TCTCAGTGCACACTTACTCTCTA 58.347 43.478 21.04 0.00 40.20 2.43
1946 2111 6.413783 TGGATTCCTCATACGCTACAAATA 57.586 37.500 3.95 0.00 0.00 1.40
2111 2337 2.680805 CGCCTGTCAAGGTATTGGTGAT 60.681 50.000 0.00 0.00 46.43 3.06
2141 2398 2.278923 GCGAAGGAGCTAGGCGAC 60.279 66.667 0.00 0.00 0.00 5.19
2189 2449 1.336755 GCACGTCAAGGTTTTGGTGAT 59.663 47.619 0.00 0.00 31.85 3.06
2207 2467 7.271511 ACAAATCAAAACCAAGAACTTATGCA 58.728 30.769 0.00 0.00 0.00 3.96
2282 2543 3.527533 GATCTACGTTGCAACATGGGTA 58.472 45.455 28.01 19.39 0.00 3.69
2785 8274 9.074576 ACGGTTCTTTATTTCTTCTAAATTGGT 57.925 29.630 0.00 0.00 0.00 3.67


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.