Multiple sequence alignment - TraesCS3B01G539500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G539500 chr3B 100.000 4188 0 0 1 4188 778739777 778735590 0.000000e+00 7734.0
1 TraesCS3B01G539500 chr3B 99.065 107 1 0 4082 4188 463087780 463087674 4.270000e-45 193.0
2 TraesCS3B01G539500 chr3B 96.364 110 4 0 4079 4188 2149107 2149216 9.250000e-42 182.0
3 TraesCS3B01G539500 chr3B 95.238 105 5 0 4081 4185 654151242 654151346 2.590000e-37 167.0
4 TraesCS3B01G539500 chrUn 99.064 1496 13 1 2066 3561 191162062 191160568 0.000000e+00 2684.0
5 TraesCS3B01G539500 chrUn 98.405 1505 14 2 2066 3561 41347440 41345937 0.000000e+00 2639.0
6 TraesCS3B01G539500 chrUn 99.433 1059 4 1 1 1059 191163130 191162074 0.000000e+00 1921.0
7 TraesCS3B01G539500 chrUn 98.961 1059 11 0 1 1059 41348510 41347452 0.000000e+00 1895.0
8 TraesCS3B01G539500 chrUn 81.600 125 21 2 3797 3919 92971136 92971012 7.410000e-18 102.0
9 TraesCS3B01G539500 chr4D 84.778 900 122 6 1009 1906 366974201 366975087 0.000000e+00 889.0
10 TraesCS3B01G539500 chr4D 83.127 889 140 8 1009 1895 509135092 509135972 0.000000e+00 802.0
11 TraesCS3B01G539500 chr4D 80.814 860 136 21 911 1758 3287329 3286487 0.000000e+00 647.0
12 TraesCS3B01G539500 chr4D 91.791 268 21 1 512 779 338446191 338446457 5.110000e-99 372.0
13 TraesCS3B01G539500 chr2A 81.849 898 135 21 1009 1895 765138749 765139629 0.000000e+00 730.0
14 TraesCS3B01G539500 chr2A 83.471 121 16 4 3801 3919 709046194 709046076 4.430000e-20 110.0
15 TraesCS3B01G539500 chr4B 84.869 727 102 5 996 1721 451808686 451809405 0.000000e+00 726.0
16 TraesCS3B01G539500 chr4B 96.296 108 3 1 4082 4188 27254134 27254241 4.300000e-40 176.0
17 TraesCS3B01G539500 chr4B 95.192 104 5 0 4082 4185 90454822 90454925 9.310000e-37 165.0
18 TraesCS3B01G539500 chr4B 94.393 107 6 0 4082 4188 468237312 468237206 9.310000e-37 165.0
19 TraesCS3B01G539500 chr4B 90.099 101 10 0 1801 1901 451809448 451809548 9.450000e-27 132.0
20 TraesCS3B01G539500 chr4A 79.953 858 145 19 912 1758 602225328 602226169 1.290000e-169 606.0
21 TraesCS3B01G539500 chr4A 83.154 558 80 6 1345 1901 97987246 97986702 8.090000e-137 497.0
22 TraesCS3B01G539500 chr4A 86.089 381 50 2 998 1378 97987622 97987245 1.400000e-109 407.0
23 TraesCS3B01G539500 chr4A 83.333 84 12 2 3826 3908 706432122 706432204 4.490000e-10 76.8
24 TraesCS3B01G539500 chr1D 81.314 685 113 7 1099 1774 467863284 467862606 3.680000e-150 542.0
25 TraesCS3B01G539500 chr1D 80.508 118 22 1 3800 3916 432025476 432025359 5.770000e-14 89.8
26 TraesCS3B01G539500 chr1A 81.168 685 114 7 1099 1774 560881501 560880823 1.710000e-148 536.0
27 TraesCS3B01G539500 chr1A 75.726 585 134 6 2589 3166 560880191 560879608 1.910000e-73 287.0
28 TraesCS3B01G539500 chr5A 82.943 598 93 8 998 1592 697858044 697858635 7.970000e-147 531.0
29 TraesCS3B01G539500 chr5A 81.979 283 45 4 1613 1895 697859838 697860114 7.000000e-58 235.0
30 TraesCS3B01G539500 chr1B 81.518 606 93 14 1106 1700 645896349 645895752 8.140000e-132 481.0
31 TraesCS3B01G539500 chr1B 90.614 277 25 1 503 779 14952499 14952774 2.380000e-97 366.0
32 TraesCS3B01G539500 chr1B 90.614 277 25 1 503 779 14994263 14994538 2.380000e-97 366.0
33 TraesCS3B01G539500 chr5D 91.791 268 22 0 512 779 450609050 450608783 1.420000e-99 374.0
34 TraesCS3B01G539500 chr5D 94.444 108 5 1 4082 4188 420620509 420620402 9.310000e-37 165.0
35 TraesCS3B01G539500 chr5D 82.645 121 19 2 3801 3919 28664895 28665015 5.730000e-19 106.0
36 TraesCS3B01G539500 chr5D 80.833 120 21 2 3802 3919 485912582 485912463 4.460000e-15 93.5
37 TraesCS3B01G539500 chr2D 91.791 268 21 1 512 779 540821509 540821243 5.110000e-99 372.0
38 TraesCS3B01G539500 chr5B 91.418 268 23 0 512 779 439263990 439263723 6.610000e-98 368.0
39 TraesCS3B01G539500 chr5B 90.357 280 25 2 500 779 671039809 671039532 2.380000e-97 366.0
40 TraesCS3B01G539500 chr7B 97.196 107 3 0 4082 4188 394769192 394769086 9.250000e-42 182.0
41 TraesCS3B01G539500 chr7B 94.444 108 5 1 4081 4188 54789673 54789567 9.310000e-37 165.0
42 TraesCS3B01G539500 chr6A 83.200 125 18 3 3798 3919 613738801 613738677 1.230000e-20 111.0
43 TraesCS3B01G539500 chr6A 81.600 125 21 2 3793 3916 17675088 17674965 7.410000e-18 102.0
44 TraesCS3B01G539500 chr7D 81.250 128 21 3 3794 3919 78042681 78042555 2.660000e-17 100.0
45 TraesCS3B01G539500 chr7D 93.023 43 3 0 3576 3618 38735445 38735487 3.500000e-06 63.9
46 TraesCS3B01G539500 chr7A 95.349 43 2 0 3576 3618 38605404 38605446 7.510000e-08 69.4
47 TraesCS3B01G539500 chr7A 95.349 43 2 0 3576 3618 38684096 38684138 7.510000e-08 69.4
48 TraesCS3B01G539500 chr7A 95.349 43 2 0 3576 3618 38712972 38713014 7.510000e-08 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G539500 chr3B 778735590 778739777 4187 True 7734.0 7734 100.0000 1 4188 1 chr3B.!!$R2 4187
1 TraesCS3B01G539500 chrUn 191160568 191163130 2562 True 2302.5 2684 99.2485 1 3561 2 chrUn.!!$R3 3560
2 TraesCS3B01G539500 chrUn 41345937 41348510 2573 True 2267.0 2639 98.6830 1 3561 2 chrUn.!!$R2 3560
3 TraesCS3B01G539500 chr4D 366974201 366975087 886 False 889.0 889 84.7780 1009 1906 1 chr4D.!!$F2 897
4 TraesCS3B01G539500 chr4D 509135092 509135972 880 False 802.0 802 83.1270 1009 1895 1 chr4D.!!$F3 886
5 TraesCS3B01G539500 chr4D 3286487 3287329 842 True 647.0 647 80.8140 911 1758 1 chr4D.!!$R1 847
6 TraesCS3B01G539500 chr2A 765138749 765139629 880 False 730.0 730 81.8490 1009 1895 1 chr2A.!!$F1 886
7 TraesCS3B01G539500 chr4B 451808686 451809548 862 False 429.0 726 87.4840 996 1901 2 chr4B.!!$F3 905
8 TraesCS3B01G539500 chr4A 602225328 602226169 841 False 606.0 606 79.9530 912 1758 1 chr4A.!!$F1 846
9 TraesCS3B01G539500 chr4A 97986702 97987622 920 True 452.0 497 84.6215 998 1901 2 chr4A.!!$R1 903
10 TraesCS3B01G539500 chr1D 467862606 467863284 678 True 542.0 542 81.3140 1099 1774 1 chr1D.!!$R2 675
11 TraesCS3B01G539500 chr1A 560879608 560881501 1893 True 411.5 536 78.4470 1099 3166 2 chr1A.!!$R1 2067
12 TraesCS3B01G539500 chr5A 697858044 697860114 2070 False 383.0 531 82.4610 998 1895 2 chr5A.!!$F1 897
13 TraesCS3B01G539500 chr1B 645895752 645896349 597 True 481.0 481 81.5180 1106 1700 1 chr1B.!!$R1 594

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
814 817 1.097547 CCTGATGTGGATCCAACGGC 61.098 60.0 18.20 4.34 0.0 5.68 F
1073 1085 0.036858 GTTCTTCTCTCCAGGCGCTT 60.037 55.0 7.64 0.00 0.0 4.68 F
1802 3049 0.536460 GAAGGTGCCGGAAACCAAGA 60.536 55.0 24.12 0.00 40.4 3.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1802 3049 0.034059 CAAGTGCTCGTCCTTCTGGT 59.966 55.0 0.0 0.0 34.23 4.00 R
1934 3199 0.633921 TGGAAGGGAGAGGGAGAGAG 59.366 60.0 0.0 0.0 0.00 3.20 R
3644 4977 0.037877 AGCTGTGGCAGAAAGAGCAT 59.962 50.0 0.0 0.0 41.70 3.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
522 523 3.119137 ACAGACTTTTTGAGGGTGTTTGC 60.119 43.478 0.00 0.00 0.00 3.68
643 646 6.127225 TGGGACTCATGAAATAAGACTCTCAG 60.127 42.308 0.00 0.00 0.00 3.35
644 647 6.097554 GGGACTCATGAAATAAGACTCTCAGA 59.902 42.308 0.00 0.00 0.00 3.27
814 817 1.097547 CCTGATGTGGATCCAACGGC 61.098 60.000 18.20 4.34 0.00 5.68
1062 1074 5.112220 TGTCATTGTGCATTGTTCTTCTC 57.888 39.130 0.00 0.00 0.00 2.87
1072 1084 1.188219 TGTTCTTCTCTCCAGGCGCT 61.188 55.000 7.64 0.00 0.00 5.92
1073 1085 0.036858 GTTCTTCTCTCCAGGCGCTT 60.037 55.000 7.64 0.00 0.00 4.68
1101 1113 3.288308 CTCCACAGCGAACGAGCCT 62.288 63.158 0.00 0.00 38.01 4.58
1251 1281 3.238497 CTGGTGGTGTCGTCCCCA 61.238 66.667 0.00 0.00 0.00 4.96
1395 1457 1.227263 GCGCCAGCTTCGGAAGATA 60.227 57.895 21.45 0.00 41.60 1.98
1476 1538 4.492160 GTCGCCGTCATGCTCCGA 62.492 66.667 0.00 0.00 0.00 4.55
1545 1607 2.124487 CTCTCGGCCCTCGTCTCT 60.124 66.667 0.00 0.00 40.32 3.10
1551 1613 1.101635 CGGCCCTCGTCTCTGACATA 61.102 60.000 0.00 0.00 32.09 2.29
1736 2983 2.266372 CCACGACACCGGGCATTA 59.734 61.111 6.32 0.00 38.01 1.90
1774 3021 3.894947 GGGAGCGACTCGAGAGGC 61.895 72.222 21.68 20.53 0.00 4.70
1790 3037 2.514824 GCGGAGGATGGAAGGTGC 60.515 66.667 0.00 0.00 0.00 5.01
1795 3042 1.910580 GAGGATGGAAGGTGCCGGAA 61.911 60.000 5.05 0.00 0.00 4.30
1796 3043 1.001393 GGATGGAAGGTGCCGGAAA 60.001 57.895 5.05 0.00 0.00 3.13
1797 3044 1.313091 GGATGGAAGGTGCCGGAAAC 61.313 60.000 5.05 0.00 0.00 2.78
1798 3045 1.304134 ATGGAAGGTGCCGGAAACC 60.304 57.895 16.91 16.91 38.03 3.27
1799 3046 2.075355 ATGGAAGGTGCCGGAAACCA 62.075 55.000 24.12 13.75 40.40 3.67
1800 3047 1.529713 GGAAGGTGCCGGAAACCAA 60.530 57.895 24.12 0.00 40.40 3.67
1801 3048 1.524008 GGAAGGTGCCGGAAACCAAG 61.524 60.000 24.12 0.00 40.40 3.61
1802 3049 0.536460 GAAGGTGCCGGAAACCAAGA 60.536 55.000 24.12 0.00 40.40 3.02
1810 3057 1.523758 CGGAAACCAAGACCAGAAGG 58.476 55.000 0.00 0.00 42.21 3.46
1857 3122 2.041762 ATGCAGGAGGAGGGCAGA 59.958 61.111 0.00 0.00 41.40 4.26
1904 3169 9.953697 ATACGTCATCTTTGTAAATACTCTCTC 57.046 33.333 0.00 0.00 0.00 3.20
1907 3172 7.416890 CGTCATCTTTGTAAATACTCTCTCCCT 60.417 40.741 0.00 0.00 0.00 4.20
1908 3173 7.923878 GTCATCTTTGTAAATACTCTCTCCCTC 59.076 40.741 0.00 0.00 0.00 4.30
1910 3175 7.648039 TCTTTGTAAATACTCTCTCCCTCTC 57.352 40.000 0.00 0.00 0.00 3.20
1911 3176 7.415086 TCTTTGTAAATACTCTCTCCCTCTCT 58.585 38.462 0.00 0.00 0.00 3.10
1914 3179 6.597562 TGTAAATACTCTCTCCCTCTCTCTC 58.402 44.000 0.00 0.00 0.00 3.20
1915 3180 5.994416 AAATACTCTCTCCCTCTCTCTCT 57.006 43.478 0.00 0.00 0.00 3.10
1917 3182 3.136641 ACTCTCTCCCTCTCTCTCTCT 57.863 52.381 0.00 0.00 0.00 3.10
1918 3183 3.041946 ACTCTCTCCCTCTCTCTCTCTC 58.958 54.545 0.00 0.00 0.00 3.20
1919 3184 3.310954 ACTCTCTCCCTCTCTCTCTCTCT 60.311 52.174 0.00 0.00 0.00 3.10
1922 3187 3.309296 TCTCCCTCTCTCTCTCTCTCTC 58.691 54.545 0.00 0.00 0.00 3.20
1925 3190 3.051803 TCCCTCTCTCTCTCTCTCTCTCT 60.052 52.174 0.00 0.00 0.00 3.10
1926 3191 3.323403 CCCTCTCTCTCTCTCTCTCTCTC 59.677 56.522 0.00 0.00 0.00 3.20
1927 3192 4.222336 CCTCTCTCTCTCTCTCTCTCTCT 58.778 52.174 0.00 0.00 0.00 3.10
1928 3193 4.280677 CCTCTCTCTCTCTCTCTCTCTCTC 59.719 54.167 0.00 0.00 0.00 3.20
1931 3196 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1932 3197 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1933 3198 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1934 3199 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1935 3200 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1936 3201 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1937 3202 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1938 3203 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1940 3205 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1941 3206 4.219115 TCTCTCTCTCTCTCTCTCTCTCC 58.781 52.174 0.00 0.00 0.00 3.71
1942 3207 3.309296 TCTCTCTCTCTCTCTCTCTCCC 58.691 54.545 0.00 0.00 0.00 4.30
1944 3209 3.309296 TCTCTCTCTCTCTCTCTCCCTC 58.691 54.545 0.00 0.00 0.00 4.30
1945 3210 3.051803 TCTCTCTCTCTCTCTCTCCCTCT 60.052 52.174 0.00 0.00 0.00 3.69
1946 3211 3.309296 TCTCTCTCTCTCTCTCCCTCTC 58.691 54.545 0.00 0.00 0.00 3.20
1947 3212 2.370189 CTCTCTCTCTCTCTCCCTCTCC 59.630 59.091 0.00 0.00 0.00 3.71
1948 3213 1.421646 CTCTCTCTCTCTCCCTCTCCC 59.578 61.905 0.00 0.00 0.00 4.30
1949 3214 1.010793 TCTCTCTCTCTCCCTCTCCCT 59.989 57.143 0.00 0.00 0.00 4.20
1950 3215 1.852965 CTCTCTCTCTCCCTCTCCCTT 59.147 57.143 0.00 0.00 0.00 3.95
1951 3216 1.850345 TCTCTCTCTCCCTCTCCCTTC 59.150 57.143 0.00 0.00 0.00 3.46
1952 3217 0.930726 TCTCTCTCCCTCTCCCTTCC 59.069 60.000 0.00 0.00 0.00 3.46
1954 3219 1.007721 CTCTCTCCCTCTCCCTTCCAA 59.992 57.143 0.00 0.00 0.00 3.53
1955 3220 1.437149 TCTCTCCCTCTCCCTTCCAAA 59.563 52.381 0.00 0.00 0.00 3.28
1956 3221 2.046447 TCTCTCCCTCTCCCTTCCAAAT 59.954 50.000 0.00 0.00 0.00 2.32
1960 3225 1.925959 CCCTCTCCCTTCCAAATTCCT 59.074 52.381 0.00 0.00 0.00 3.36
1961 3226 2.092158 CCCTCTCCCTTCCAAATTCCTC 60.092 54.545 0.00 0.00 0.00 3.71
1963 3228 3.268072 CCTCTCCCTTCCAAATTCCTCTT 59.732 47.826 0.00 0.00 0.00 2.85
1964 3229 4.264128 CCTCTCCCTTCCAAATTCCTCTTT 60.264 45.833 0.00 0.00 0.00 2.52
1965 3230 4.666512 TCTCCCTTCCAAATTCCTCTTTG 58.333 43.478 0.00 0.00 36.17 2.77
1967 3232 5.073437 TCCCTTCCAAATTCCTCTTTGAA 57.927 39.130 0.00 0.00 38.17 2.69
1968 3233 5.079643 TCCCTTCCAAATTCCTCTTTGAAG 58.920 41.667 0.00 0.00 38.17 3.02
1969 3234 4.835056 CCCTTCCAAATTCCTCTTTGAAGT 59.165 41.667 0.00 0.00 38.17 3.01
1970 3235 5.305386 CCCTTCCAAATTCCTCTTTGAAGTT 59.695 40.000 0.00 0.00 38.17 2.66
1972 3237 6.925718 CCTTCCAAATTCCTCTTTGAAGTTTC 59.074 38.462 0.00 0.00 38.17 2.78
1973 3238 7.416964 TTCCAAATTCCTCTTTGAAGTTTCA 57.583 32.000 0.00 0.00 38.17 2.69
1974 3239 7.042797 TCCAAATTCCTCTTTGAAGTTTCAG 57.957 36.000 0.00 0.00 38.17 3.02
1975 3240 6.607198 TCCAAATTCCTCTTTGAAGTTTCAGT 59.393 34.615 0.00 0.00 38.17 3.41
1976 3241 7.124147 TCCAAATTCCTCTTTGAAGTTTCAGTT 59.876 33.333 0.00 0.00 38.17 3.16
1977 3242 7.765819 CCAAATTCCTCTTTGAAGTTTCAGTTT 59.234 33.333 0.00 0.00 38.17 2.66
1978 3243 9.154847 CAAATTCCTCTTTGAAGTTTCAGTTTT 57.845 29.630 0.00 0.00 38.17 2.43
1990 3255 9.793259 TGAAGTTTCAGTTTTATTATCCTGAGT 57.207 29.630 0.00 0.00 35.54 3.41
1992 3257 9.793259 AAGTTTCAGTTTTATTATCCTGAGTCA 57.207 29.630 0.00 0.00 35.54 3.41
1993 3258 9.965902 AGTTTCAGTTTTATTATCCTGAGTCAT 57.034 29.630 0.00 0.00 35.54 3.06
2036 3301 8.888716 ACATATTGTATGCTTGTAAAATCGTGA 58.111 29.630 0.00 0.00 0.00 4.35
2037 3302 9.158364 CATATTGTATGCTTGTAAAATCGTGAC 57.842 33.333 0.00 0.00 0.00 3.67
2038 3303 6.795098 TTGTATGCTTGTAAAATCGTGACT 57.205 33.333 0.00 0.00 0.00 3.41
2039 3304 6.164408 TGTATGCTTGTAAAATCGTGACTG 57.836 37.500 0.00 0.00 0.00 3.51
2040 3305 4.685169 ATGCTTGTAAAATCGTGACTGG 57.315 40.909 0.00 0.00 0.00 4.00
2041 3306 3.734463 TGCTTGTAAAATCGTGACTGGA 58.266 40.909 0.00 0.00 0.00 3.86
2042 3307 4.323417 TGCTTGTAAAATCGTGACTGGAT 58.677 39.130 0.00 0.00 0.00 3.41
2043 3308 5.483811 TGCTTGTAAAATCGTGACTGGATA 58.516 37.500 0.00 0.00 0.00 2.59
2044 3309 5.580691 TGCTTGTAAAATCGTGACTGGATAG 59.419 40.000 0.00 0.00 0.00 2.08
2045 3310 5.581085 GCTTGTAAAATCGTGACTGGATAGT 59.419 40.000 0.00 0.00 40.66 2.12
2046 3311 6.755141 GCTTGTAAAATCGTGACTGGATAGTA 59.245 38.462 0.00 0.00 37.25 1.82
2047 3312 7.277098 GCTTGTAAAATCGTGACTGGATAGTAA 59.723 37.037 0.00 0.00 37.25 2.24
2048 3313 9.146984 CTTGTAAAATCGTGACTGGATAGTAAA 57.853 33.333 0.00 0.00 37.25 2.01
2049 3314 9.491675 TTGTAAAATCGTGACTGGATAGTAAAA 57.508 29.630 0.00 0.00 37.25 1.52
2050 3315 9.491675 TGTAAAATCGTGACTGGATAGTAAAAA 57.508 29.630 0.00 0.00 37.25 1.94
2053 3318 8.561738 AAATCGTGACTGGATAGTAAAAATGT 57.438 30.769 0.00 0.00 37.25 2.71
2054 3319 8.561738 AATCGTGACTGGATAGTAAAAATGTT 57.438 30.769 0.00 0.00 37.25 2.71
2055 3320 7.972832 TCGTGACTGGATAGTAAAAATGTTT 57.027 32.000 0.00 0.00 37.25 2.83
2056 3321 9.661563 ATCGTGACTGGATAGTAAAAATGTTTA 57.338 29.630 0.00 0.00 37.25 2.01
2057 3322 9.661563 TCGTGACTGGATAGTAAAAATGTTTAT 57.338 29.630 0.00 0.00 37.25 1.40
3441 4774 4.395854 TGCATGTCTCATTTGTGTGGATAC 59.604 41.667 0.00 0.00 0.00 2.24
3444 4777 4.637276 TGTCTCATTTGTGTGGATACGTT 58.363 39.130 0.00 0.00 42.51 3.99
3488 4821 5.245526 GTCTTTTGTACTCTCACCCTCCTAA 59.754 44.000 0.00 0.00 0.00 2.69
3567 4900 8.664669 AAAAATACCAACATCAGGATTACCTT 57.335 30.769 0.00 0.00 45.36 3.50
3568 4901 8.664669 AAAATACCAACATCAGGATTACCTTT 57.335 30.769 0.00 0.00 45.36 3.11
3569 4902 8.664669 AAATACCAACATCAGGATTACCTTTT 57.335 30.769 0.00 0.00 45.36 2.27
3570 4903 7.881775 ATACCAACATCAGGATTACCTTTTC 57.118 36.000 0.00 0.00 45.36 2.29
3571 4904 5.892348 ACCAACATCAGGATTACCTTTTCT 58.108 37.500 0.00 0.00 45.36 2.52
3572 4905 7.027874 ACCAACATCAGGATTACCTTTTCTA 57.972 36.000 0.00 0.00 45.36 2.10
3573 4906 7.643123 ACCAACATCAGGATTACCTTTTCTAT 58.357 34.615 0.00 0.00 45.36 1.98
3574 4907 8.778059 ACCAACATCAGGATTACCTTTTCTATA 58.222 33.333 0.00 0.00 45.36 1.31
3575 4908 9.799106 CCAACATCAGGATTACCTTTTCTATAT 57.201 33.333 0.00 0.00 45.36 0.86
3589 4922 8.055279 CCTTTTCTATATCAAAGGTTTGCTGA 57.945 34.615 12.06 0.00 42.90 4.26
3590 4923 8.522830 CCTTTTCTATATCAAAGGTTTGCTGAA 58.477 33.333 12.06 0.00 42.90 3.02
3592 4925 9.859427 TTTTCTATATCAAAGGTTTGCTGAATG 57.141 29.630 0.00 0.00 38.05 2.67
3593 4926 8.806429 TTCTATATCAAAGGTTTGCTGAATGA 57.194 30.769 0.00 0.00 38.05 2.57
3594 4927 8.985315 TCTATATCAAAGGTTTGCTGAATGAT 57.015 30.769 0.00 0.00 38.05 2.45
3595 4928 9.412460 TCTATATCAAAGGTTTGCTGAATGATT 57.588 29.630 0.00 0.00 38.05 2.57
3596 4929 9.459640 CTATATCAAAGGTTTGCTGAATGATTG 57.540 33.333 0.00 0.00 38.05 2.67
3597 4930 4.309099 TCAAAGGTTTGCTGAATGATTGC 58.691 39.130 0.00 0.00 38.05 3.56
3598 4931 4.059511 CAAAGGTTTGCTGAATGATTGCA 58.940 39.130 0.00 0.00 34.69 4.08
3599 4932 4.339872 AAGGTTTGCTGAATGATTGCAA 57.660 36.364 0.00 0.00 43.69 4.08
3600 4933 3.921677 AGGTTTGCTGAATGATTGCAAG 58.078 40.909 4.94 0.00 45.52 4.01
3601 4934 3.575256 AGGTTTGCTGAATGATTGCAAGA 59.425 39.130 4.94 0.00 45.52 3.02
3602 4935 3.924686 GGTTTGCTGAATGATTGCAAGAG 59.075 43.478 4.94 0.00 45.52 2.85
3603 4936 2.933495 TGCTGAATGATTGCAAGAGC 57.067 45.000 4.94 5.92 42.57 4.09
3620 4953 7.227992 GCAAGAGCACATTAGTTAGTAGAAG 57.772 40.000 0.00 0.00 41.58 2.85
3621 4954 6.814146 GCAAGAGCACATTAGTTAGTAGAAGT 59.186 38.462 0.00 0.00 41.58 3.01
3622 4955 7.974501 GCAAGAGCACATTAGTTAGTAGAAGTA 59.025 37.037 0.00 0.00 41.58 2.24
3623 4956 9.509855 CAAGAGCACATTAGTTAGTAGAAGTAG 57.490 37.037 0.00 0.00 0.00 2.57
3624 4957 8.810990 AGAGCACATTAGTTAGTAGAAGTAGT 57.189 34.615 0.00 0.00 0.00 2.73
3625 4958 9.902684 AGAGCACATTAGTTAGTAGAAGTAGTA 57.097 33.333 0.00 0.00 0.00 1.82
3626 4959 9.934190 GAGCACATTAGTTAGTAGAAGTAGTAC 57.066 37.037 0.00 0.00 0.00 2.73
3627 4960 9.458727 AGCACATTAGTTAGTAGAAGTAGTACA 57.541 33.333 2.52 0.00 0.00 2.90
3628 4961 9.719279 GCACATTAGTTAGTAGAAGTAGTACAG 57.281 37.037 2.52 0.00 0.00 2.74
3629 4962 9.719279 CACATTAGTTAGTAGAAGTAGTACAGC 57.281 37.037 2.52 0.00 0.00 4.40
3630 4963 9.683870 ACATTAGTTAGTAGAAGTAGTACAGCT 57.316 33.333 2.52 1.84 0.00 4.24
3635 4968 9.683870 AGTTAGTAGAAGTAGTACAGCTAACAT 57.316 33.333 20.87 11.74 39.34 2.71
3639 4972 9.111613 AGTAGAAGTAGTACAGCTAACATACTG 57.888 37.037 2.52 0.00 39.86 2.74
3640 4973 7.336161 AGAAGTAGTACAGCTAACATACTGG 57.664 40.000 2.52 0.00 38.25 4.00
3641 4974 5.517322 AGTAGTACAGCTAACATACTGGC 57.483 43.478 2.52 0.00 38.25 4.85
3642 4975 4.954202 AGTAGTACAGCTAACATACTGGCA 59.046 41.667 2.52 0.00 38.25 4.92
3643 4976 5.598830 AGTAGTACAGCTAACATACTGGCAT 59.401 40.000 2.52 0.00 38.25 4.40
3644 4977 6.776116 AGTAGTACAGCTAACATACTGGCATA 59.224 38.462 2.52 0.00 38.25 3.14
3645 4978 6.672266 AGTACAGCTAACATACTGGCATAT 57.328 37.500 0.00 0.00 38.25 1.78
3646 4979 6.459066 AGTACAGCTAACATACTGGCATATG 58.541 40.000 0.00 0.00 38.25 1.78
3647 4980 4.067896 ACAGCTAACATACTGGCATATGC 58.932 43.478 19.79 19.79 38.25 3.14
3648 4981 4.202398 ACAGCTAACATACTGGCATATGCT 60.202 41.667 26.12 10.26 41.70 3.79
3649 4982 4.391216 CAGCTAACATACTGGCATATGCTC 59.609 45.833 26.12 16.73 41.70 4.26
3650 4983 4.285517 AGCTAACATACTGGCATATGCTCT 59.714 41.667 26.12 11.74 41.70 4.09
3651 4984 4.999950 GCTAACATACTGGCATATGCTCTT 59.000 41.667 26.12 13.06 41.70 2.85
3652 4985 5.471456 GCTAACATACTGGCATATGCTCTTT 59.529 40.000 26.12 11.40 41.70 2.52
3653 4986 6.348050 GCTAACATACTGGCATATGCTCTTTC 60.348 42.308 26.12 10.51 41.70 2.62
3654 4987 5.301835 ACATACTGGCATATGCTCTTTCT 57.698 39.130 26.12 5.64 41.70 2.52
3655 4988 5.061853 ACATACTGGCATATGCTCTTTCTG 58.938 41.667 26.12 17.80 41.70 3.02
3656 4989 2.295885 ACTGGCATATGCTCTTTCTGC 58.704 47.619 26.12 8.37 41.70 4.26
3659 4992 2.770699 GCATATGCTCTTTCTGCCAC 57.229 50.000 20.64 0.00 38.21 5.01
3660 4993 2.019249 GCATATGCTCTTTCTGCCACA 58.981 47.619 20.64 0.00 38.21 4.17
3661 4994 2.033049 GCATATGCTCTTTCTGCCACAG 59.967 50.000 20.64 0.00 38.21 3.66
3662 4995 1.742761 TATGCTCTTTCTGCCACAGC 58.257 50.000 0.00 0.00 40.48 4.40
3663 4996 0.037877 ATGCTCTTTCTGCCACAGCT 59.962 50.000 0.00 0.00 40.80 4.24
3664 4997 0.887836 TGCTCTTTCTGCCACAGCTG 60.888 55.000 13.48 13.48 40.80 4.24
3665 4998 1.584380 GCTCTTTCTGCCACAGCTGG 61.584 60.000 19.93 2.55 40.80 4.85
3673 5006 4.100479 CCACAGCTGGCATTGGAA 57.900 55.556 19.93 0.00 0.00 3.53
3674 5007 2.353858 CCACAGCTGGCATTGGAAA 58.646 52.632 19.93 0.00 0.00 3.13
3675 5008 0.899720 CCACAGCTGGCATTGGAAAT 59.100 50.000 19.93 0.00 0.00 2.17
3676 5009 2.101783 CCACAGCTGGCATTGGAAATA 58.898 47.619 19.93 0.00 0.00 1.40
3677 5010 2.496871 CCACAGCTGGCATTGGAAATAA 59.503 45.455 19.93 0.00 0.00 1.40
3678 5011 3.055963 CCACAGCTGGCATTGGAAATAAA 60.056 43.478 19.93 0.00 0.00 1.40
3679 5012 4.178540 CACAGCTGGCATTGGAAATAAAG 58.821 43.478 19.93 0.00 0.00 1.85
3680 5013 4.082081 CACAGCTGGCATTGGAAATAAAGA 60.082 41.667 19.93 0.00 0.00 2.52
3681 5014 4.713321 ACAGCTGGCATTGGAAATAAAGAT 59.287 37.500 19.93 0.00 0.00 2.40
3682 5015 5.188359 ACAGCTGGCATTGGAAATAAAGATT 59.812 36.000 19.93 0.00 0.00 2.40
3683 5016 5.522460 CAGCTGGCATTGGAAATAAAGATTG 59.478 40.000 5.57 0.00 0.00 2.67
3684 5017 5.188359 AGCTGGCATTGGAAATAAAGATTGT 59.812 36.000 0.00 0.00 0.00 2.71
3685 5018 5.876460 GCTGGCATTGGAAATAAAGATTGTT 59.124 36.000 0.00 0.00 0.00 2.83
3686 5019 7.041107 GCTGGCATTGGAAATAAAGATTGTTA 58.959 34.615 0.00 0.00 0.00 2.41
3687 5020 7.712205 GCTGGCATTGGAAATAAAGATTGTTAT 59.288 33.333 0.00 0.00 0.00 1.89
3688 5021 9.603921 CTGGCATTGGAAATAAAGATTGTTATT 57.396 29.630 0.00 0.00 35.62 1.40
3689 5022 9.956640 TGGCATTGGAAATAAAGATTGTTATTT 57.043 25.926 3.26 3.26 43.23 1.40
3705 5038 8.693542 ATTGTTATTTCAACTAAGCAAGATGC 57.306 30.769 0.00 0.00 45.46 3.91
3714 5047 3.543641 GCAAGATGCATGGCCCCC 61.544 66.667 2.46 0.00 44.26 5.40
3715 5048 2.281091 CAAGATGCATGGCCCCCT 59.719 61.111 2.46 0.00 0.00 4.79
3716 5049 1.831286 CAAGATGCATGGCCCCCTC 60.831 63.158 2.46 0.00 0.00 4.30
3717 5050 2.011044 AAGATGCATGGCCCCCTCT 61.011 57.895 2.46 0.00 0.00 3.69
3718 5051 2.203451 GATGCATGGCCCCCTCTG 60.203 66.667 2.46 0.00 0.00 3.35
3719 5052 3.025599 ATGCATGGCCCCCTCTGT 61.026 61.111 0.00 0.00 0.00 3.41
3720 5053 2.578586 GATGCATGGCCCCCTCTGTT 62.579 60.000 2.46 0.00 0.00 3.16
3721 5054 1.288508 ATGCATGGCCCCCTCTGTTA 61.289 55.000 0.00 0.00 0.00 2.41
3722 5055 1.453928 GCATGGCCCCCTCTGTTAC 60.454 63.158 0.00 0.00 0.00 2.50
3723 5056 1.926426 GCATGGCCCCCTCTGTTACT 61.926 60.000 0.00 0.00 0.00 2.24
3724 5057 1.507140 CATGGCCCCCTCTGTTACTA 58.493 55.000 0.00 0.00 0.00 1.82
3725 5058 1.141053 CATGGCCCCCTCTGTTACTAC 59.859 57.143 0.00 0.00 0.00 2.73
3726 5059 0.416231 TGGCCCCCTCTGTTACTACT 59.584 55.000 0.00 0.00 0.00 2.57
3727 5060 1.647506 TGGCCCCCTCTGTTACTACTA 59.352 52.381 0.00 0.00 0.00 1.82
3728 5061 2.317973 GGCCCCCTCTGTTACTACTAG 58.682 57.143 0.00 0.00 0.00 2.57
3729 5062 2.359037 GGCCCCCTCTGTTACTACTAGT 60.359 54.545 0.00 0.00 0.00 2.57
3730 5063 3.117360 GGCCCCCTCTGTTACTACTAGTA 60.117 52.174 1.89 1.89 0.00 1.82
3731 5064 4.143543 GCCCCCTCTGTTACTACTAGTAG 58.856 52.174 25.30 25.30 39.04 2.57
3732 5065 4.727677 CCCCCTCTGTTACTACTAGTAGG 58.272 52.174 29.05 14.52 37.49 3.18
3733 5066 4.143543 CCCCTCTGTTACTACTAGTAGGC 58.856 52.174 29.05 19.74 37.49 3.93
3734 5067 4.141205 CCCCTCTGTTACTACTAGTAGGCT 60.141 50.000 29.05 14.85 37.49 4.58
3735 5068 5.447757 CCCTCTGTTACTACTAGTAGGCTT 58.552 45.833 29.05 14.21 37.49 4.35
3736 5069 6.410157 CCCCTCTGTTACTACTAGTAGGCTTA 60.410 46.154 29.05 13.28 37.49 3.09
3737 5070 6.711645 CCCTCTGTTACTACTAGTAGGCTTAG 59.288 46.154 29.05 21.15 37.49 2.18
3738 5071 7.281841 CCTCTGTTACTACTAGTAGGCTTAGT 58.718 42.308 29.05 15.26 37.49 2.24
3739 5072 8.428063 CCTCTGTTACTACTAGTAGGCTTAGTA 58.572 40.741 29.05 14.32 37.49 1.82
3740 5073 9.829507 CTCTGTTACTACTAGTAGGCTTAGTAA 57.170 37.037 29.05 18.65 37.49 2.24
3764 5097 8.762481 AAATTTGAACTATTATAGGTGTCCCC 57.238 34.615 4.15 0.00 0.00 4.81
3765 5098 6.894735 TTTGAACTATTATAGGTGTCCCCA 57.105 37.500 4.15 0.00 34.66 4.96
3766 5099 7.460214 TTTGAACTATTATAGGTGTCCCCAT 57.540 36.000 4.15 0.00 34.66 4.00
3767 5100 8.570038 TTTGAACTATTATAGGTGTCCCCATA 57.430 34.615 4.15 0.00 34.66 2.74
3768 5101 7.549147 TGAACTATTATAGGTGTCCCCATAC 57.451 40.000 4.15 0.00 34.66 2.39
3769 5102 6.499350 TGAACTATTATAGGTGTCCCCATACC 59.501 42.308 4.15 0.00 37.23 2.73
3770 5103 5.984827 ACTATTATAGGTGTCCCCATACCA 58.015 41.667 4.15 0.00 39.46 3.25
3771 5104 6.581122 ACTATTATAGGTGTCCCCATACCAT 58.419 40.000 4.15 0.00 39.46 3.55
3772 5105 7.029390 ACTATTATAGGTGTCCCCATACCATT 58.971 38.462 4.15 0.00 39.46 3.16
3773 5106 6.796867 ATTATAGGTGTCCCCATACCATTT 57.203 37.500 0.00 0.00 39.46 2.32
3774 5107 6.599986 TTATAGGTGTCCCCATACCATTTT 57.400 37.500 0.00 0.00 39.46 1.82
3775 5108 7.709024 TTATAGGTGTCCCCATACCATTTTA 57.291 36.000 0.00 0.00 39.46 1.52
3776 5109 6.796867 ATAGGTGTCCCCATACCATTTTAT 57.203 37.500 0.00 0.00 39.46 1.40
3777 5110 5.481615 AGGTGTCCCCATACCATTTTATT 57.518 39.130 0.00 0.00 39.46 1.40
3778 5111 5.849140 AGGTGTCCCCATACCATTTTATTT 58.151 37.500 0.00 0.00 39.46 1.40
3779 5112 6.268414 AGGTGTCCCCATACCATTTTATTTT 58.732 36.000 0.00 0.00 39.46 1.82
3780 5113 6.733334 AGGTGTCCCCATACCATTTTATTTTT 59.267 34.615 0.00 0.00 39.46 1.94
3781 5114 6.821160 GGTGTCCCCATACCATTTTATTTTTG 59.179 38.462 0.00 0.00 36.94 2.44
3782 5115 7.310734 GGTGTCCCCATACCATTTTATTTTTGA 60.311 37.037 0.00 0.00 36.94 2.69
3783 5116 7.547722 GTGTCCCCATACCATTTTATTTTTGAC 59.452 37.037 0.00 0.00 0.00 3.18
3784 5117 7.235606 TGTCCCCATACCATTTTATTTTTGACA 59.764 33.333 0.00 0.00 0.00 3.58
3785 5118 7.763985 GTCCCCATACCATTTTATTTTTGACAG 59.236 37.037 0.00 0.00 0.00 3.51
3786 5119 7.676043 TCCCCATACCATTTTATTTTTGACAGA 59.324 33.333 0.00 0.00 0.00 3.41
3787 5120 8.485392 CCCCATACCATTTTATTTTTGACAGAT 58.515 33.333 0.00 0.00 0.00 2.90
3788 5121 9.889128 CCCATACCATTTTATTTTTGACAGATT 57.111 29.630 0.00 0.00 0.00 2.40
3791 5124 7.671495 ACCATTTTATTTTTGACAGATTGGC 57.329 32.000 0.00 0.00 0.00 4.52
3792 5125 6.368516 ACCATTTTATTTTTGACAGATTGGCG 59.631 34.615 0.00 0.00 0.00 5.69
3793 5126 6.368516 CCATTTTATTTTTGACAGATTGGCGT 59.631 34.615 0.00 0.00 0.00 5.68
3794 5127 7.411804 CCATTTTATTTTTGACAGATTGGCGTC 60.412 37.037 0.00 0.00 0.00 5.19
3795 5128 5.957842 TTATTTTTGACAGATTGGCGTCT 57.042 34.783 0.00 0.00 33.18 4.18
3796 5129 3.896648 TTTTTGACAGATTGGCGTCTC 57.103 42.857 0.00 0.00 33.18 3.36
3797 5130 2.839486 TTTGACAGATTGGCGTCTCT 57.161 45.000 0.00 0.00 33.18 3.10
3798 5131 3.953712 TTTGACAGATTGGCGTCTCTA 57.046 42.857 0.00 0.00 33.18 2.43
3799 5132 4.471904 TTTGACAGATTGGCGTCTCTAT 57.528 40.909 0.00 0.00 33.18 1.98
3800 5133 5.592104 TTTGACAGATTGGCGTCTCTATA 57.408 39.130 0.00 0.00 33.18 1.31
3801 5134 5.791336 TTGACAGATTGGCGTCTCTATAT 57.209 39.130 0.00 0.00 33.18 0.86
3802 5135 6.894339 TTGACAGATTGGCGTCTCTATATA 57.106 37.500 0.00 0.00 33.18 0.86
3803 5136 6.255596 TGACAGATTGGCGTCTCTATATAC 57.744 41.667 0.00 0.00 33.18 1.47
3804 5137 6.004574 TGACAGATTGGCGTCTCTATATACT 58.995 40.000 0.00 0.00 33.18 2.12
3805 5138 6.149640 TGACAGATTGGCGTCTCTATATACTC 59.850 42.308 0.00 0.00 33.18 2.59
3806 5139 5.416326 ACAGATTGGCGTCTCTATATACTCC 59.584 44.000 0.00 0.00 0.00 3.85
3807 5140 4.951094 AGATTGGCGTCTCTATATACTCCC 59.049 45.833 0.00 0.00 0.00 4.30
3808 5141 3.083122 TGGCGTCTCTATATACTCCCC 57.917 52.381 0.00 0.00 0.00 4.81
3809 5142 2.291411 TGGCGTCTCTATATACTCCCCC 60.291 54.545 0.00 0.00 0.00 5.40
3810 5143 2.291411 GGCGTCTCTATATACTCCCCCA 60.291 54.545 0.00 0.00 0.00 4.96
3811 5144 3.627747 GGCGTCTCTATATACTCCCCCAT 60.628 52.174 0.00 0.00 0.00 4.00
3812 5145 4.024670 GCGTCTCTATATACTCCCCCATT 58.975 47.826 0.00 0.00 0.00 3.16
3813 5146 4.098196 GCGTCTCTATATACTCCCCCATTC 59.902 50.000 0.00 0.00 0.00 2.67
3814 5147 4.645588 CGTCTCTATATACTCCCCCATTCC 59.354 50.000 0.00 0.00 0.00 3.01
3815 5148 5.590818 GTCTCTATATACTCCCCCATTCCA 58.409 45.833 0.00 0.00 0.00 3.53
3816 5149 5.422650 GTCTCTATATACTCCCCCATTCCAC 59.577 48.000 0.00 0.00 0.00 4.02
3817 5150 5.077300 TCTCTATATACTCCCCCATTCCACA 59.923 44.000 0.00 0.00 0.00 4.17
3818 5151 5.733000 TCTATATACTCCCCCATTCCACAA 58.267 41.667 0.00 0.00 0.00 3.33
3819 5152 6.339220 TCTATATACTCCCCCATTCCACAAT 58.661 40.000 0.00 0.00 0.00 2.71
3820 5153 7.492552 TCTATATACTCCCCCATTCCACAATA 58.507 38.462 0.00 0.00 0.00 1.90
3821 5154 8.135586 TCTATATACTCCCCCATTCCACAATAT 58.864 37.037 0.00 0.00 0.00 1.28
3822 5155 3.600448 ACTCCCCCATTCCACAATATG 57.400 47.619 0.00 0.00 0.00 1.78
3836 5169 6.395426 CCACAATATGGTGCATACTGATTT 57.605 37.500 4.53 0.00 44.46 2.17
3837 5170 6.808829 CCACAATATGGTGCATACTGATTTT 58.191 36.000 4.53 0.00 44.46 1.82
3838 5171 7.267128 CCACAATATGGTGCATACTGATTTTT 58.733 34.615 4.53 0.00 44.46 1.94
3839 5172 8.412456 CCACAATATGGTGCATACTGATTTTTA 58.588 33.333 4.53 0.00 44.46 1.52
3840 5173 9.970395 CACAATATGGTGCATACTGATTTTTAT 57.030 29.630 0.00 0.00 29.68 1.40
3867 5200 8.634475 AAAGTCAAGCTTTACAAACTTTGATC 57.366 30.769 13.07 0.00 44.90 2.92
3868 5201 7.333528 AGTCAAGCTTTACAAACTTTGATCA 57.666 32.000 13.07 0.00 0.00 2.92
3869 5202 7.771183 AGTCAAGCTTTACAAACTTTGATCAA 58.229 30.769 13.07 3.38 0.00 2.57
3870 5203 7.917505 AGTCAAGCTTTACAAACTTTGATCAAG 59.082 33.333 13.07 5.87 38.64 3.02
3958 5291 8.522830 ACATATTTTTATATTGCATTCCCTCCG 58.477 33.333 0.00 0.00 0.00 4.63
3959 5292 6.976934 ATTTTTATATTGCATTCCCTCCGT 57.023 33.333 0.00 0.00 0.00 4.69
3960 5293 6.385649 TTTTTATATTGCATTCCCTCCGTC 57.614 37.500 0.00 0.00 0.00 4.79
3961 5294 2.568623 ATATTGCATTCCCTCCGTCC 57.431 50.000 0.00 0.00 0.00 4.79
3962 5295 1.208706 TATTGCATTCCCTCCGTCCA 58.791 50.000 0.00 0.00 0.00 4.02
3963 5296 0.331278 ATTGCATTCCCTCCGTCCAA 59.669 50.000 0.00 0.00 0.00 3.53
3964 5297 0.111446 TTGCATTCCCTCCGTCCAAA 59.889 50.000 0.00 0.00 0.00 3.28
3965 5298 0.111446 TGCATTCCCTCCGTCCAAAA 59.889 50.000 0.00 0.00 0.00 2.44
3966 5299 1.253100 GCATTCCCTCCGTCCAAAAA 58.747 50.000 0.00 0.00 0.00 1.94
3967 5300 1.824852 GCATTCCCTCCGTCCAAAAAT 59.175 47.619 0.00 0.00 0.00 1.82
3968 5301 3.020984 GCATTCCCTCCGTCCAAAAATA 58.979 45.455 0.00 0.00 0.00 1.40
3969 5302 3.445805 GCATTCCCTCCGTCCAAAAATAA 59.554 43.478 0.00 0.00 0.00 1.40
3970 5303 4.440112 GCATTCCCTCCGTCCAAAAATAAG 60.440 45.833 0.00 0.00 0.00 1.73
3971 5304 4.376225 TTCCCTCCGTCCAAAAATAAGT 57.624 40.909 0.00 0.00 0.00 2.24
3972 5305 3.681593 TCCCTCCGTCCAAAAATAAGTG 58.318 45.455 0.00 0.00 0.00 3.16
3973 5306 2.163613 CCCTCCGTCCAAAAATAAGTGC 59.836 50.000 0.00 0.00 0.00 4.40
3974 5307 2.163613 CCTCCGTCCAAAAATAAGTGCC 59.836 50.000 0.00 0.00 0.00 5.01
3975 5308 1.807742 TCCGTCCAAAAATAAGTGCCG 59.192 47.619 0.00 0.00 0.00 5.69
3976 5309 1.538075 CCGTCCAAAAATAAGTGCCGT 59.462 47.619 0.00 0.00 0.00 5.68
3977 5310 2.580589 CGTCCAAAAATAAGTGCCGTG 58.419 47.619 0.00 0.00 0.00 4.94
3978 5311 2.667171 CGTCCAAAAATAAGTGCCGTGG 60.667 50.000 0.00 0.00 0.00 4.94
3979 5312 2.295070 GTCCAAAAATAAGTGCCGTGGT 59.705 45.455 0.00 0.00 0.00 4.16
3980 5313 2.959707 TCCAAAAATAAGTGCCGTGGTT 59.040 40.909 0.00 0.00 0.00 3.67
3981 5314 3.385111 TCCAAAAATAAGTGCCGTGGTTT 59.615 39.130 0.00 0.00 0.00 3.27
3982 5315 4.123506 CCAAAAATAAGTGCCGTGGTTTT 58.876 39.130 0.00 0.00 0.00 2.43
3983 5316 5.068723 TCCAAAAATAAGTGCCGTGGTTTTA 59.931 36.000 0.00 0.00 0.00 1.52
3984 5317 5.404066 CCAAAAATAAGTGCCGTGGTTTTAG 59.596 40.000 0.00 0.00 0.00 1.85
3985 5318 5.777850 AAAATAAGTGCCGTGGTTTTAGT 57.222 34.783 0.00 0.00 0.00 2.24
3986 5319 5.777850 AAATAAGTGCCGTGGTTTTAGTT 57.222 34.783 0.00 0.00 0.00 2.24
3987 5320 5.366829 AATAAGTGCCGTGGTTTTAGTTC 57.633 39.130 0.00 0.00 0.00 3.01
3988 5321 2.632987 AGTGCCGTGGTTTTAGTTCT 57.367 45.000 0.00 0.00 0.00 3.01
3989 5322 3.756933 AGTGCCGTGGTTTTAGTTCTA 57.243 42.857 0.00 0.00 0.00 2.10
3990 5323 4.075963 AGTGCCGTGGTTTTAGTTCTAA 57.924 40.909 0.00 0.00 0.00 2.10
3991 5324 4.648651 AGTGCCGTGGTTTTAGTTCTAAT 58.351 39.130 0.00 0.00 0.00 1.73
3992 5325 5.067954 AGTGCCGTGGTTTTAGTTCTAATT 58.932 37.500 0.00 0.00 0.00 1.40
3993 5326 6.232692 AGTGCCGTGGTTTTAGTTCTAATTA 58.767 36.000 0.00 0.00 0.00 1.40
3994 5327 6.882678 AGTGCCGTGGTTTTAGTTCTAATTAT 59.117 34.615 0.00 0.00 0.00 1.28
3995 5328 8.042515 AGTGCCGTGGTTTTAGTTCTAATTATA 58.957 33.333 0.00 0.00 0.00 0.98
3996 5329 8.118607 GTGCCGTGGTTTTAGTTCTAATTATAC 58.881 37.037 0.00 0.00 0.00 1.47
3997 5330 8.042515 TGCCGTGGTTTTAGTTCTAATTATACT 58.957 33.333 5.89 5.89 0.00 2.12
3998 5331 8.333186 GCCGTGGTTTTAGTTCTAATTATACTG 58.667 37.037 9.50 0.00 0.00 2.74
3999 5332 9.374838 CCGTGGTTTTAGTTCTAATTATACTGT 57.625 33.333 9.50 0.00 0.00 3.55
4001 5334 9.983804 GTGGTTTTAGTTCTAATTATACTGTGC 57.016 33.333 9.50 0.00 0.00 4.57
4002 5335 9.953565 TGGTTTTAGTTCTAATTATACTGTGCT 57.046 29.630 9.50 0.00 0.00 4.40
4017 5350 4.542662 CTGTGCTCCAGTATATGTTTGC 57.457 45.455 0.00 0.00 36.37 3.68
4018 5351 3.278574 TGTGCTCCAGTATATGTTTGCC 58.721 45.455 0.00 0.00 0.00 4.52
4019 5352 3.278574 GTGCTCCAGTATATGTTTGCCA 58.721 45.455 0.00 0.00 0.00 4.92
4020 5353 3.313526 GTGCTCCAGTATATGTTTGCCAG 59.686 47.826 0.00 0.00 0.00 4.85
4021 5354 3.054434 TGCTCCAGTATATGTTTGCCAGT 60.054 43.478 0.00 0.00 0.00 4.00
4022 5355 3.561725 GCTCCAGTATATGTTTGCCAGTC 59.438 47.826 0.00 0.00 0.00 3.51
4023 5356 4.769688 CTCCAGTATATGTTTGCCAGTCA 58.230 43.478 0.00 0.00 0.00 3.41
4024 5357 5.172687 TCCAGTATATGTTTGCCAGTCAA 57.827 39.130 0.00 0.00 0.00 3.18
4025 5358 5.565509 TCCAGTATATGTTTGCCAGTCAAA 58.434 37.500 0.00 0.00 42.01 2.69
4026 5359 5.647658 TCCAGTATATGTTTGCCAGTCAAAG 59.352 40.000 0.00 0.00 44.59 2.77
4027 5360 5.415701 CCAGTATATGTTTGCCAGTCAAAGT 59.584 40.000 0.00 0.00 44.59 2.66
4028 5361 6.071952 CCAGTATATGTTTGCCAGTCAAAGTT 60.072 38.462 0.00 0.00 44.59 2.66
4029 5362 7.370383 CAGTATATGTTTGCCAGTCAAAGTTT 58.630 34.615 0.00 0.00 44.59 2.66
4030 5363 7.326789 CAGTATATGTTTGCCAGTCAAAGTTTG 59.673 37.037 9.44 9.44 44.59 2.93
4031 5364 2.615869 TGTTTGCCAGTCAAAGTTTGC 58.384 42.857 10.90 6.35 44.59 3.68
4032 5365 2.233431 TGTTTGCCAGTCAAAGTTTGCT 59.767 40.909 10.90 8.49 44.59 3.91
4033 5366 3.445450 TGTTTGCCAGTCAAAGTTTGCTA 59.555 39.130 10.90 0.00 44.59 3.49
4034 5367 4.081972 TGTTTGCCAGTCAAAGTTTGCTAA 60.082 37.500 10.90 0.00 44.59 3.09
4035 5368 3.988379 TGCCAGTCAAAGTTTGCTAAG 57.012 42.857 10.90 7.52 0.00 2.18
4036 5369 3.287222 TGCCAGTCAAAGTTTGCTAAGT 58.713 40.909 10.90 0.00 0.00 2.24
4037 5370 3.699038 TGCCAGTCAAAGTTTGCTAAGTT 59.301 39.130 10.90 0.00 0.00 2.66
4038 5371 4.159506 TGCCAGTCAAAGTTTGCTAAGTTT 59.840 37.500 10.90 7.74 37.37 2.66
4047 5380 6.944557 AAGTTTGCTAAGTTTGACAACAAC 57.055 33.333 0.00 0.00 35.63 3.32
4048 5381 6.019779 AGTTTGCTAAGTTTGACAACAACA 57.980 33.333 0.00 0.00 35.63 3.33
4049 5382 6.451393 AGTTTGCTAAGTTTGACAACAACAA 58.549 32.000 0.00 0.00 35.63 2.83
4050 5383 6.926272 AGTTTGCTAAGTTTGACAACAACAAA 59.074 30.769 0.00 0.00 35.63 2.83
4051 5384 7.602265 AGTTTGCTAAGTTTGACAACAACAAAT 59.398 29.630 0.00 0.00 39.01 2.32
4052 5385 7.897575 TTGCTAAGTTTGACAACAACAAATT 57.102 28.000 0.00 0.00 39.01 1.82
4053 5386 7.897575 TGCTAAGTTTGACAACAACAAATTT 57.102 28.000 0.00 0.00 39.30 1.82
4054 5387 8.988064 TGCTAAGTTTGACAACAACAAATTTA 57.012 26.923 0.00 0.00 37.91 1.40
4055 5388 9.593134 TGCTAAGTTTGACAACAACAAATTTAT 57.407 25.926 0.00 0.00 38.09 1.40
4059 5392 8.587952 AGTTTGACAACAACAAATTTATAGGC 57.412 30.769 0.00 0.00 39.01 3.93
4060 5393 8.200792 AGTTTGACAACAACAAATTTATAGGCA 58.799 29.630 0.00 0.00 39.01 4.75
4061 5394 7.938563 TTGACAACAACAAATTTATAGGCAC 57.061 32.000 0.00 0.00 0.00 5.01
4062 5395 7.283625 TGACAACAACAAATTTATAGGCACT 57.716 32.000 0.00 0.00 46.37 4.40
4077 5410 4.630644 AGGCACTACATATGGAATGGAG 57.369 45.455 7.80 0.00 36.02 3.86
4078 5411 3.328931 AGGCACTACATATGGAATGGAGG 59.671 47.826 7.80 0.00 36.02 4.30
4079 5412 3.560025 GGCACTACATATGGAATGGAGGG 60.560 52.174 7.80 0.00 36.47 4.30
4080 5413 3.327757 GCACTACATATGGAATGGAGGGA 59.672 47.826 7.80 0.00 35.38 4.20
4081 5414 4.804261 GCACTACATATGGAATGGAGGGAC 60.804 50.000 7.80 0.00 35.38 4.46
4082 5415 3.578716 ACTACATATGGAATGGAGGGACG 59.421 47.826 7.80 0.00 34.30 4.79
4083 5416 1.699634 ACATATGGAATGGAGGGACGG 59.300 52.381 7.80 0.00 0.00 4.79
4084 5417 1.977854 CATATGGAATGGAGGGACGGA 59.022 52.381 0.00 0.00 0.00 4.69
4085 5418 2.184088 TATGGAATGGAGGGACGGAA 57.816 50.000 0.00 0.00 0.00 4.30
4086 5419 1.295020 ATGGAATGGAGGGACGGAAA 58.705 50.000 0.00 0.00 0.00 3.13
4087 5420 1.295020 TGGAATGGAGGGACGGAAAT 58.705 50.000 0.00 0.00 0.00 2.17
4088 5421 2.483547 TGGAATGGAGGGACGGAAATA 58.516 47.619 0.00 0.00 0.00 1.40
4089 5422 2.171870 TGGAATGGAGGGACGGAAATAC 59.828 50.000 0.00 0.00 0.00 1.89
4090 5423 2.486727 GGAATGGAGGGACGGAAATACC 60.487 54.545 0.00 0.00 0.00 2.73
4091 5424 2.191981 ATGGAGGGACGGAAATACCT 57.808 50.000 0.00 0.00 34.57 3.08
4092 5425 1.961133 TGGAGGGACGGAAATACCTT 58.039 50.000 0.00 0.00 30.50 3.50
4093 5426 2.271777 TGGAGGGACGGAAATACCTTT 58.728 47.619 0.00 0.00 30.50 3.11
4094 5427 2.645797 TGGAGGGACGGAAATACCTTTT 59.354 45.455 0.00 0.00 30.50 2.27
4095 5428 3.014623 GGAGGGACGGAAATACCTTTTG 58.985 50.000 0.00 0.00 30.50 2.44
4097 5430 2.645797 AGGGACGGAAATACCTTTTGGA 59.354 45.455 0.00 0.00 44.07 3.53
4098 5431 3.014623 GGGACGGAAATACCTTTTGGAG 58.985 50.000 0.00 0.00 44.07 3.86
4099 5432 2.422479 GGACGGAAATACCTTTTGGAGC 59.578 50.000 0.00 0.00 44.07 4.70
4100 5433 3.344515 GACGGAAATACCTTTTGGAGCT 58.655 45.455 0.00 0.00 44.07 4.09
4101 5434 3.344515 ACGGAAATACCTTTTGGAGCTC 58.655 45.455 4.71 4.71 44.07 4.09
4102 5435 2.351726 CGGAAATACCTTTTGGAGCTCG 59.648 50.000 7.83 0.00 44.07 5.03
4103 5436 2.683362 GGAAATACCTTTTGGAGCTCGG 59.317 50.000 7.83 5.29 44.07 4.63
4104 5437 2.420058 AATACCTTTTGGAGCTCGGG 57.580 50.000 7.83 7.14 44.07 5.14
4105 5438 0.107165 ATACCTTTTGGAGCTCGGGC 60.107 55.000 7.83 0.00 44.07 6.13
4115 5448 4.154347 GCTCGGGCTCCAGTGAGG 62.154 72.222 0.00 0.00 39.14 3.86
4121 5454 3.005539 GCTCCAGTGAGGCCTCCA 61.006 66.667 29.95 15.13 39.14 3.86
4122 5455 2.596851 GCTCCAGTGAGGCCTCCAA 61.597 63.158 29.95 9.78 39.14 3.53
4123 5456 2.069776 CTCCAGTGAGGCCTCCAAA 58.930 57.895 29.95 8.94 37.29 3.28
4124 5457 0.622665 CTCCAGTGAGGCCTCCAAAT 59.377 55.000 29.95 8.92 37.29 2.32
4125 5458 1.005215 CTCCAGTGAGGCCTCCAAATT 59.995 52.381 29.95 5.47 37.29 1.82
4126 5459 1.004745 TCCAGTGAGGCCTCCAAATTC 59.995 52.381 29.95 12.61 37.29 2.17
4127 5460 1.272092 CCAGTGAGGCCTCCAAATTCA 60.272 52.381 29.95 7.46 0.00 2.57
4128 5461 2.517959 CAGTGAGGCCTCCAAATTCAA 58.482 47.619 29.95 5.60 0.00 2.69
4129 5462 2.892852 CAGTGAGGCCTCCAAATTCAAA 59.107 45.455 29.95 4.78 0.00 2.69
4130 5463 3.512724 CAGTGAGGCCTCCAAATTCAAAT 59.487 43.478 29.95 4.85 0.00 2.32
4131 5464 4.020839 CAGTGAGGCCTCCAAATTCAAATT 60.021 41.667 29.95 1.51 0.00 1.82
4132 5465 4.594491 AGTGAGGCCTCCAAATTCAAATTT 59.406 37.500 29.95 0.00 39.07 1.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
712 715 3.078612 AGTCCCTGAAAAGTCCCTACCTA 59.921 47.826 0.00 0.00 0.00 3.08
814 817 1.406065 ATCCCATCTGACGCTCCTGG 61.406 60.000 0.00 0.00 0.00 4.45
1086 1098 2.811317 GGAGGCTCGTTCGCTGTG 60.811 66.667 8.69 0.00 0.00 3.66
1087 1099 4.070552 GGGAGGCTCGTTCGCTGT 62.071 66.667 8.69 0.00 0.00 4.40
1230 1260 2.733593 GACGACACCACCAGCGTC 60.734 66.667 0.00 0.00 44.83 5.19
1262 1292 2.364002 TCGTGTGTCTTCATGACCTCAA 59.636 45.455 0.00 0.00 44.75 3.02
1269 1299 1.432514 CCAGGTCGTGTGTCTTCATG 58.567 55.000 0.00 0.00 0.00 3.07
1320 1350 2.972505 CCGTTGGTGAGCACGCTT 60.973 61.111 0.00 0.00 34.98 4.68
1395 1457 0.470833 ATAGGAGCTCCATGACGGCT 60.471 55.000 33.90 13.61 38.89 5.52
1425 1487 4.373116 GCGCGGAAGGACAGGACA 62.373 66.667 8.83 0.00 0.00 4.02
1452 1514 2.043852 ATGACGGCGACCTCCTCT 60.044 61.111 16.62 0.00 0.00 3.69
1545 1607 2.507547 GCGCGGACCGTTATGTCA 60.508 61.111 16.73 0.00 39.71 3.58
1732 2979 4.058721 TGATGGTGTCGAGGATGTAATG 57.941 45.455 0.00 0.00 0.00 1.90
1736 2983 1.414181 GGATGATGGTGTCGAGGATGT 59.586 52.381 0.00 0.00 0.00 3.06
1774 3021 2.190578 GGCACCTTCCATCCTCCG 59.809 66.667 0.00 0.00 0.00 4.63
1775 3022 2.190578 CGGCACCTTCCATCCTCC 59.809 66.667 0.00 0.00 0.00 4.30
1776 3023 1.910580 TTCCGGCACCTTCCATCCTC 61.911 60.000 0.00 0.00 0.00 3.71
1778 3025 1.001393 TTTCCGGCACCTTCCATCC 60.001 57.895 0.00 0.00 0.00 3.51
1790 3037 1.523758 CTTCTGGTCTTGGTTTCCGG 58.476 55.000 0.00 0.00 0.00 5.14
1795 3042 1.344763 CTCGTCCTTCTGGTCTTGGTT 59.655 52.381 0.00 0.00 34.23 3.67
1796 3043 0.969894 CTCGTCCTTCTGGTCTTGGT 59.030 55.000 0.00 0.00 34.23 3.67
1797 3044 0.390472 GCTCGTCCTTCTGGTCTTGG 60.390 60.000 0.00 0.00 34.23 3.61
1798 3045 0.318441 TGCTCGTCCTTCTGGTCTTG 59.682 55.000 0.00 0.00 34.23 3.02
1799 3046 0.318762 GTGCTCGTCCTTCTGGTCTT 59.681 55.000 0.00 0.00 34.23 3.01
1800 3047 0.540830 AGTGCTCGTCCTTCTGGTCT 60.541 55.000 0.00 0.00 34.23 3.85
1801 3048 0.318762 AAGTGCTCGTCCTTCTGGTC 59.681 55.000 0.00 0.00 34.23 4.02
1802 3049 0.034059 CAAGTGCTCGTCCTTCTGGT 59.966 55.000 0.00 0.00 34.23 4.00
1846 3099 1.040339 ATGTCGAGTCTGCCCTCCTC 61.040 60.000 0.00 0.00 0.00 3.71
1857 3122 3.338126 GACGGCGTCCATGTCGAGT 62.338 63.158 28.72 9.29 39.90 4.18
1890 3155 6.388689 AGAGAGAGAGGGAGAGAGTATTTACA 59.611 42.308 0.00 0.00 0.00 2.41
1895 3160 4.832492 AGAGAGAGAGAGGGAGAGAGTAT 58.168 47.826 0.00 0.00 0.00 2.12
1903 3168 3.051803 AGAGAGAGAGAGAGAGAGAGGGA 60.052 52.174 0.00 0.00 0.00 4.20
1904 3169 3.312890 AGAGAGAGAGAGAGAGAGAGGG 58.687 54.545 0.00 0.00 0.00 4.30
1907 3172 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1908 3173 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1910 3175 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1911 3176 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1914 3179 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1915 3180 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1917 3182 5.136068 AGAGAGAGAGAGAGAGAGAGAGA 57.864 47.826 0.00 0.00 0.00 3.10
1918 3183 4.280677 GGAGAGAGAGAGAGAGAGAGAGAG 59.719 54.167 0.00 0.00 0.00 3.20
1919 3184 4.219115 GGAGAGAGAGAGAGAGAGAGAGA 58.781 52.174 0.00 0.00 0.00 3.10
1922 3187 3.312890 AGGGAGAGAGAGAGAGAGAGAG 58.687 54.545 0.00 0.00 0.00 3.20
1925 3190 3.309296 GAGAGGGAGAGAGAGAGAGAGA 58.691 54.545 0.00 0.00 0.00 3.10
1926 3191 2.370189 GGAGAGGGAGAGAGAGAGAGAG 59.630 59.091 0.00 0.00 0.00 3.20
1927 3192 2.408565 GGAGAGGGAGAGAGAGAGAGA 58.591 57.143 0.00 0.00 0.00 3.10
1928 3193 1.421646 GGGAGAGGGAGAGAGAGAGAG 59.578 61.905 0.00 0.00 0.00 3.20
1931 3196 1.850345 GAAGGGAGAGGGAGAGAGAGA 59.150 57.143 0.00 0.00 0.00 3.10
1932 3197 1.133482 GGAAGGGAGAGGGAGAGAGAG 60.133 61.905 0.00 0.00 0.00 3.20
1933 3198 0.930726 GGAAGGGAGAGGGAGAGAGA 59.069 60.000 0.00 0.00 0.00 3.10
1934 3199 0.633921 TGGAAGGGAGAGGGAGAGAG 59.366 60.000 0.00 0.00 0.00 3.20
1935 3200 1.093408 TTGGAAGGGAGAGGGAGAGA 58.907 55.000 0.00 0.00 0.00 3.10
1936 3201 1.958288 TTTGGAAGGGAGAGGGAGAG 58.042 55.000 0.00 0.00 0.00 3.20
1937 3202 2.668850 ATTTGGAAGGGAGAGGGAGA 57.331 50.000 0.00 0.00 0.00 3.71
1938 3203 2.092158 GGAATTTGGAAGGGAGAGGGAG 60.092 54.545 0.00 0.00 0.00 4.30
1940 3205 1.925959 AGGAATTTGGAAGGGAGAGGG 59.074 52.381 0.00 0.00 0.00 4.30
1941 3206 2.849318 AGAGGAATTTGGAAGGGAGAGG 59.151 50.000 0.00 0.00 0.00 3.69
1942 3207 4.582973 AAGAGGAATTTGGAAGGGAGAG 57.417 45.455 0.00 0.00 0.00 3.20
1944 3209 4.666512 TCAAAGAGGAATTTGGAAGGGAG 58.333 43.478 0.00 0.00 39.99 4.30
1945 3210 4.740154 TCAAAGAGGAATTTGGAAGGGA 57.260 40.909 0.00 0.00 39.99 4.20
1946 3211 4.835056 ACTTCAAAGAGGAATTTGGAAGGG 59.165 41.667 0.00 0.00 39.99 3.95
1947 3212 6.410942 AACTTCAAAGAGGAATTTGGAAGG 57.589 37.500 0.00 0.00 39.99 3.46
1948 3213 7.491682 TGAAACTTCAAAGAGGAATTTGGAAG 58.508 34.615 0.00 0.00 39.99 3.46
1949 3214 7.124147 ACTGAAACTTCAAAGAGGAATTTGGAA 59.876 33.333 0.00 0.00 39.99 3.53
1950 3215 6.607198 ACTGAAACTTCAAAGAGGAATTTGGA 59.393 34.615 0.00 0.00 39.99 3.53
1951 3216 6.809869 ACTGAAACTTCAAAGAGGAATTTGG 58.190 36.000 0.00 0.00 39.99 3.28
1952 3217 8.707938 AAACTGAAACTTCAAAGAGGAATTTG 57.292 30.769 0.00 0.00 40.75 2.32
1964 3229 9.793259 ACTCAGGATAATAAAACTGAAACTTCA 57.207 29.630 0.00 0.00 39.26 3.02
1967 3232 9.965902 ATGACTCAGGATAATAAAACTGAAACT 57.034 29.630 0.00 0.00 39.26 2.66
2010 3275 8.888716 TCACGATTTTACAAGCATACAATATGT 58.111 29.630 0.00 0.00 0.00 2.29
2011 3276 9.158364 GTCACGATTTTACAAGCATACAATATG 57.842 33.333 0.00 0.00 0.00 1.78
2012 3277 9.109393 AGTCACGATTTTACAAGCATACAATAT 57.891 29.630 0.00 0.00 0.00 1.28
2013 3278 8.387354 CAGTCACGATTTTACAAGCATACAATA 58.613 33.333 0.00 0.00 0.00 1.90
2014 3279 7.243487 CAGTCACGATTTTACAAGCATACAAT 58.757 34.615 0.00 0.00 0.00 2.71
2015 3280 6.348132 CCAGTCACGATTTTACAAGCATACAA 60.348 38.462 0.00 0.00 0.00 2.41
2016 3281 5.121611 CCAGTCACGATTTTACAAGCATACA 59.878 40.000 0.00 0.00 0.00 2.29
2017 3282 5.350365 TCCAGTCACGATTTTACAAGCATAC 59.650 40.000 0.00 0.00 0.00 2.39
2018 3283 5.483811 TCCAGTCACGATTTTACAAGCATA 58.516 37.500 0.00 0.00 0.00 3.14
2019 3284 4.323417 TCCAGTCACGATTTTACAAGCAT 58.677 39.130 0.00 0.00 0.00 3.79
2020 3285 3.734463 TCCAGTCACGATTTTACAAGCA 58.266 40.909 0.00 0.00 0.00 3.91
2021 3286 4.946784 ATCCAGTCACGATTTTACAAGC 57.053 40.909 0.00 0.00 0.00 4.01
2022 3287 8.697846 TTACTATCCAGTCACGATTTTACAAG 57.302 34.615 0.00 0.00 36.14 3.16
2023 3288 9.491675 TTTTACTATCCAGTCACGATTTTACAA 57.508 29.630 0.00 0.00 36.14 2.41
2024 3289 9.491675 TTTTTACTATCCAGTCACGATTTTACA 57.508 29.630 0.00 0.00 36.14 2.41
2027 3292 9.010029 ACATTTTTACTATCCAGTCACGATTTT 57.990 29.630 0.00 0.00 36.14 1.82
2028 3293 8.561738 ACATTTTTACTATCCAGTCACGATTT 57.438 30.769 0.00 0.00 36.14 2.17
2029 3294 8.561738 AACATTTTTACTATCCAGTCACGATT 57.438 30.769 0.00 0.00 36.14 3.34
2030 3295 8.561738 AAACATTTTTACTATCCAGTCACGAT 57.438 30.769 0.00 0.00 36.14 3.73
2031 3296 7.972832 AAACATTTTTACTATCCAGTCACGA 57.027 32.000 0.00 0.00 36.14 4.35
2189 3454 5.416271 TTGGACAGTAGGGTGTAATTCTC 57.584 43.478 0.00 0.00 0.00 2.87
3395 4728 2.094675 AGCCCAAGTATGCATGTGAAC 58.905 47.619 10.16 0.00 0.00 3.18
3441 4774 3.495377 TGGAAATAACGTCCACTCAAACG 59.505 43.478 0.00 0.00 40.33 3.60
3444 4777 4.039973 AGACTGGAAATAACGTCCACTCAA 59.960 41.667 0.00 0.00 40.33 3.02
3508 4841 5.533528 GGCCAGACTTAAAAGGTTTCACTAA 59.466 40.000 0.00 0.00 0.00 2.24
3509 4842 5.067954 GGCCAGACTTAAAAGGTTTCACTA 58.932 41.667 0.00 0.00 0.00 2.74
3511 4844 3.634910 TGGCCAGACTTAAAAGGTTTCAC 59.365 43.478 0.00 0.00 0.00 3.18
3512 4845 3.904717 TGGCCAGACTTAAAAGGTTTCA 58.095 40.909 0.00 0.00 0.00 2.69
3513 4846 4.341235 ACTTGGCCAGACTTAAAAGGTTTC 59.659 41.667 5.11 0.00 0.00 2.78
3516 4849 3.595190 ACTTGGCCAGACTTAAAAGGT 57.405 42.857 5.11 0.00 0.00 3.50
3517 4850 4.937201 AAACTTGGCCAGACTTAAAAGG 57.063 40.909 5.11 0.00 0.00 3.11
3566 4899 9.859427 CATTCAGCAAACCTTTGATATAGAAAA 57.141 29.630 1.81 0.00 40.55 2.29
3567 4900 9.241919 TCATTCAGCAAACCTTTGATATAGAAA 57.758 29.630 1.81 0.00 40.55 2.52
3568 4901 8.806429 TCATTCAGCAAACCTTTGATATAGAA 57.194 30.769 1.81 0.00 40.55 2.10
3569 4902 8.985315 ATCATTCAGCAAACCTTTGATATAGA 57.015 30.769 1.81 0.00 40.55 1.98
3570 4903 9.459640 CAATCATTCAGCAAACCTTTGATATAG 57.540 33.333 1.81 0.00 40.55 1.31
3571 4904 7.922278 GCAATCATTCAGCAAACCTTTGATATA 59.078 33.333 1.81 0.00 40.55 0.86
3572 4905 6.759827 GCAATCATTCAGCAAACCTTTGATAT 59.240 34.615 1.81 0.00 40.55 1.63
3573 4906 6.101332 GCAATCATTCAGCAAACCTTTGATA 58.899 36.000 1.81 0.00 40.55 2.15
3574 4907 4.933400 GCAATCATTCAGCAAACCTTTGAT 59.067 37.500 1.81 0.00 40.55 2.57
3575 4908 4.202233 TGCAATCATTCAGCAAACCTTTGA 60.202 37.500 1.81 0.00 40.55 2.69
3576 4909 4.059511 TGCAATCATTCAGCAAACCTTTG 58.940 39.130 0.00 0.00 41.03 2.77
3577 4910 4.339872 TGCAATCATTCAGCAAACCTTT 57.660 36.364 0.00 0.00 34.97 3.11
3578 4911 4.039488 TCTTGCAATCATTCAGCAAACCTT 59.961 37.500 0.00 0.00 46.30 3.50
3579 4912 3.575256 TCTTGCAATCATTCAGCAAACCT 59.425 39.130 0.00 0.00 46.30 3.50
3580 4913 3.916761 TCTTGCAATCATTCAGCAAACC 58.083 40.909 0.00 0.00 46.30 3.27
3581 4914 3.367025 GCTCTTGCAATCATTCAGCAAAC 59.633 43.478 0.00 0.00 46.30 2.93
3582 4915 3.581755 GCTCTTGCAATCATTCAGCAAA 58.418 40.909 0.00 0.00 46.30 3.68
3583 4916 3.226346 GCTCTTGCAATCATTCAGCAA 57.774 42.857 0.00 0.00 45.07 3.91
3584 4917 2.933495 GCTCTTGCAATCATTCAGCA 57.067 45.000 0.00 0.00 39.41 4.41
3596 4929 6.814146 ACTTCTACTAACTAATGTGCTCTTGC 59.186 38.462 0.00 0.00 40.20 4.01
3597 4930 9.509855 CTACTTCTACTAACTAATGTGCTCTTG 57.490 37.037 0.00 0.00 0.00 3.02
3598 4931 9.245481 ACTACTTCTACTAACTAATGTGCTCTT 57.755 33.333 0.00 0.00 0.00 2.85
3599 4932 8.810990 ACTACTTCTACTAACTAATGTGCTCT 57.189 34.615 0.00 0.00 0.00 4.09
3600 4933 9.934190 GTACTACTTCTACTAACTAATGTGCTC 57.066 37.037 0.00 0.00 0.00 4.26
3601 4934 9.458727 TGTACTACTTCTACTAACTAATGTGCT 57.541 33.333 0.00 0.00 0.00 4.40
3602 4935 9.719279 CTGTACTACTTCTACTAACTAATGTGC 57.281 37.037 0.00 0.00 0.00 4.57
3603 4936 9.719279 GCTGTACTACTTCTACTAACTAATGTG 57.281 37.037 0.00 0.00 0.00 3.21
3604 4937 9.683870 AGCTGTACTACTTCTACTAACTAATGT 57.316 33.333 0.00 0.00 0.00 2.71
3609 4942 9.683870 ATGTTAGCTGTACTACTTCTACTAACT 57.316 33.333 0.00 0.00 39.15 2.24
3613 4946 9.111613 CAGTATGTTAGCTGTACTACTTCTACT 57.888 37.037 0.00 0.00 0.00 2.57
3614 4947 8.344098 CCAGTATGTTAGCTGTACTACTTCTAC 58.656 40.741 0.00 0.00 0.00 2.59
3615 4948 7.013083 GCCAGTATGTTAGCTGTACTACTTCTA 59.987 40.741 0.00 0.00 0.00 2.10
3616 4949 6.183360 GCCAGTATGTTAGCTGTACTACTTCT 60.183 42.308 0.00 0.00 0.00 2.85
3617 4950 5.978322 GCCAGTATGTTAGCTGTACTACTTC 59.022 44.000 0.00 0.00 0.00 3.01
3618 4951 5.421056 TGCCAGTATGTTAGCTGTACTACTT 59.579 40.000 0.00 0.00 0.00 2.24
3619 4952 4.954202 TGCCAGTATGTTAGCTGTACTACT 59.046 41.667 0.00 2.49 0.00 2.57
3620 4953 5.258456 TGCCAGTATGTTAGCTGTACTAC 57.742 43.478 0.00 0.33 0.00 2.73
3621 4954 7.602753 CATATGCCAGTATGTTAGCTGTACTA 58.397 38.462 0.00 0.00 0.00 1.82
3622 4955 6.459066 CATATGCCAGTATGTTAGCTGTACT 58.541 40.000 0.00 0.00 0.00 2.73
3623 4956 5.120830 GCATATGCCAGTATGTTAGCTGTAC 59.879 44.000 17.26 0.00 35.09 2.90
3624 4957 5.012046 AGCATATGCCAGTATGTTAGCTGTA 59.988 40.000 23.96 0.00 43.38 2.74
3625 4958 4.067896 GCATATGCCAGTATGTTAGCTGT 58.932 43.478 17.26 0.00 35.09 4.40
3626 4959 4.321718 AGCATATGCCAGTATGTTAGCTG 58.678 43.478 23.96 0.00 43.38 4.24
3627 4960 4.285517 AGAGCATATGCCAGTATGTTAGCT 59.714 41.667 23.96 0.16 43.38 3.32
3628 4961 4.573900 AGAGCATATGCCAGTATGTTAGC 58.426 43.478 23.96 0.00 43.38 3.09
3629 4962 6.933521 AGAAAGAGCATATGCCAGTATGTTAG 59.066 38.462 23.96 0.00 43.38 2.34
3630 4963 6.707608 CAGAAAGAGCATATGCCAGTATGTTA 59.292 38.462 23.96 0.00 43.38 2.41
3631 4964 5.530171 CAGAAAGAGCATATGCCAGTATGTT 59.470 40.000 23.96 7.24 43.38 2.71
3632 4965 5.061853 CAGAAAGAGCATATGCCAGTATGT 58.938 41.667 23.96 3.36 43.38 2.29
3633 4966 4.083431 GCAGAAAGAGCATATGCCAGTATG 60.083 45.833 23.96 16.01 43.38 2.39
3634 4967 4.070716 GCAGAAAGAGCATATGCCAGTAT 58.929 43.478 23.96 4.97 43.38 2.12
3635 4968 3.470709 GCAGAAAGAGCATATGCCAGTA 58.529 45.455 23.96 0.00 43.38 2.74
3636 4969 2.295885 GCAGAAAGAGCATATGCCAGT 58.704 47.619 23.96 5.80 43.38 4.00
3640 4973 2.019249 TGTGGCAGAAAGAGCATATGC 58.981 47.619 20.36 20.36 42.49 3.14
3641 4974 2.033049 GCTGTGGCAGAAAGAGCATATG 59.967 50.000 0.00 0.00 38.54 1.78
3642 4975 2.092538 AGCTGTGGCAGAAAGAGCATAT 60.093 45.455 0.00 0.00 41.70 1.78
3643 4976 1.280133 AGCTGTGGCAGAAAGAGCATA 59.720 47.619 0.00 0.00 41.70 3.14
3644 4977 0.037877 AGCTGTGGCAGAAAGAGCAT 59.962 50.000 0.00 0.00 41.70 3.79
3645 4978 0.887836 CAGCTGTGGCAGAAAGAGCA 60.888 55.000 5.25 0.00 41.70 4.26
3646 4979 1.584380 CCAGCTGTGGCAGAAAGAGC 61.584 60.000 13.81 0.00 41.70 4.09
3647 4980 2.552802 CCAGCTGTGGCAGAAAGAG 58.447 57.895 13.81 0.00 41.70 2.85
3648 4981 4.806936 CCAGCTGTGGCAGAAAGA 57.193 55.556 13.81 0.00 41.70 2.52
3657 4990 3.872511 TTATTTCCAATGCCAGCTGTG 57.127 42.857 13.81 3.86 0.00 3.66
3658 4991 4.088634 TCTTTATTTCCAATGCCAGCTGT 58.911 39.130 13.81 0.00 0.00 4.40
3659 4992 4.724074 TCTTTATTTCCAATGCCAGCTG 57.276 40.909 6.78 6.78 0.00 4.24
3660 4993 5.188359 ACAATCTTTATTTCCAATGCCAGCT 59.812 36.000 0.00 0.00 0.00 4.24
3661 4994 5.422145 ACAATCTTTATTTCCAATGCCAGC 58.578 37.500 0.00 0.00 0.00 4.85
3662 4995 9.603921 AATAACAATCTTTATTTCCAATGCCAG 57.396 29.630 0.00 0.00 28.99 4.85
3663 4996 9.956640 AAATAACAATCTTTATTTCCAATGCCA 57.043 25.926 0.00 0.00 37.14 4.92
3679 5012 8.801913 GCATCTTGCTTAGTTGAAATAACAATC 58.198 33.333 0.00 0.00 40.96 2.67
3680 5013 8.306038 TGCATCTTGCTTAGTTGAAATAACAAT 58.694 29.630 0.75 0.00 45.31 2.71
3681 5014 7.656412 TGCATCTTGCTTAGTTGAAATAACAA 58.344 30.769 0.75 0.00 45.31 2.83
3682 5015 7.213216 TGCATCTTGCTTAGTTGAAATAACA 57.787 32.000 0.75 0.00 45.31 2.41
3683 5016 7.221452 CCATGCATCTTGCTTAGTTGAAATAAC 59.779 37.037 0.00 0.00 45.31 1.89
3684 5017 7.259882 CCATGCATCTTGCTTAGTTGAAATAA 58.740 34.615 0.00 0.00 45.31 1.40
3685 5018 6.681120 GCCATGCATCTTGCTTAGTTGAAATA 60.681 38.462 0.00 0.00 45.31 1.40
3686 5019 5.657474 CCATGCATCTTGCTTAGTTGAAAT 58.343 37.500 0.00 0.00 45.31 2.17
3687 5020 4.618927 GCCATGCATCTTGCTTAGTTGAAA 60.619 41.667 0.00 0.00 45.31 2.69
3688 5021 3.119388 GCCATGCATCTTGCTTAGTTGAA 60.119 43.478 0.00 0.00 45.31 2.69
3689 5022 2.424601 GCCATGCATCTTGCTTAGTTGA 59.575 45.455 0.00 0.00 45.31 3.18
3690 5023 2.480759 GGCCATGCATCTTGCTTAGTTG 60.481 50.000 0.00 0.00 45.31 3.16
3691 5024 1.753073 GGCCATGCATCTTGCTTAGTT 59.247 47.619 0.00 0.00 45.31 2.24
3692 5025 1.396653 GGCCATGCATCTTGCTTAGT 58.603 50.000 0.00 0.00 45.31 2.24
3693 5026 0.672342 GGGCCATGCATCTTGCTTAG 59.328 55.000 4.39 0.00 45.31 2.18
3694 5027 0.756442 GGGGCCATGCATCTTGCTTA 60.756 55.000 4.39 0.00 45.31 3.09
3695 5028 2.062177 GGGGCCATGCATCTTGCTT 61.062 57.895 4.39 0.00 45.31 3.91
3696 5029 2.443390 GGGGCCATGCATCTTGCT 60.443 61.111 4.39 0.00 45.31 3.91
3697 5030 3.543641 GGGGGCCATGCATCTTGC 61.544 66.667 4.39 0.00 45.29 4.01
3698 5031 1.831286 GAGGGGGCCATGCATCTTG 60.831 63.158 4.39 0.00 0.00 3.02
3699 5032 2.011044 AGAGGGGGCCATGCATCTT 61.011 57.895 4.39 0.00 0.00 2.40
3700 5033 2.369291 AGAGGGGGCCATGCATCT 60.369 61.111 4.39 0.00 0.00 2.90
3701 5034 2.203451 CAGAGGGGGCCATGCATC 60.203 66.667 4.39 0.00 0.00 3.91
3702 5035 1.288508 TAACAGAGGGGGCCATGCAT 61.289 55.000 4.39 0.00 0.00 3.96
3703 5036 1.928046 TAACAGAGGGGGCCATGCA 60.928 57.895 4.39 0.00 0.00 3.96
3704 5037 1.453928 GTAACAGAGGGGGCCATGC 60.454 63.158 4.39 0.00 0.00 4.06
3705 5038 1.141053 GTAGTAACAGAGGGGGCCATG 59.859 57.143 4.39 0.23 0.00 3.66
3706 5039 1.009675 AGTAGTAACAGAGGGGGCCAT 59.990 52.381 4.39 0.00 0.00 4.40
3707 5040 0.416231 AGTAGTAACAGAGGGGGCCA 59.584 55.000 4.39 0.00 0.00 5.36
3708 5041 2.317973 CTAGTAGTAACAGAGGGGGCC 58.682 57.143 0.00 0.00 0.00 5.80
3709 5042 3.029483 ACTAGTAGTAACAGAGGGGGC 57.971 52.381 0.00 0.00 0.00 5.80
3710 5043 4.727677 CCTACTAGTAGTAACAGAGGGGG 58.272 52.174 24.84 5.73 29.00 5.40
3711 5044 4.141205 AGCCTACTAGTAGTAACAGAGGGG 60.141 50.000 24.84 10.34 29.00 4.79
3712 5045 5.051409 AGCCTACTAGTAGTAACAGAGGG 57.949 47.826 24.84 10.99 29.00 4.30
3713 5046 7.281841 ACTAAGCCTACTAGTAGTAACAGAGG 58.718 42.308 24.84 13.24 29.00 3.69
3714 5047 9.829507 TTACTAAGCCTACTAGTAGTAACAGAG 57.170 37.037 24.84 16.51 35.27 3.35
3738 5071 9.856162 GGGGACACCTATAATAGTTCAAATTTA 57.144 33.333 0.00 0.00 36.80 1.40
3739 5072 8.340757 TGGGGACACCTATAATAGTTCAAATTT 58.659 33.333 0.00 0.00 41.11 1.82
3740 5073 7.878495 TGGGGACACCTATAATAGTTCAAATT 58.122 34.615 0.00 0.00 41.11 1.82
3741 5074 7.460214 TGGGGACACCTATAATAGTTCAAAT 57.540 36.000 0.00 0.00 41.11 2.32
3742 5075 6.894735 TGGGGACACCTATAATAGTTCAAA 57.105 37.500 0.00 0.00 41.11 2.69
3759 5092 7.616313 TGTCAAAAATAAAATGGTATGGGGAC 58.384 34.615 0.00 0.00 0.00 4.46
3760 5093 7.676043 TCTGTCAAAAATAAAATGGTATGGGGA 59.324 33.333 0.00 0.00 0.00 4.81
3761 5094 7.846066 TCTGTCAAAAATAAAATGGTATGGGG 58.154 34.615 0.00 0.00 0.00 4.96
3762 5095 9.889128 AATCTGTCAAAAATAAAATGGTATGGG 57.111 29.630 0.00 0.00 0.00 4.00
3765 5098 9.382275 GCCAATCTGTCAAAAATAAAATGGTAT 57.618 29.630 0.00 0.00 0.00 2.73
3766 5099 7.543868 CGCCAATCTGTCAAAAATAAAATGGTA 59.456 33.333 0.00 0.00 0.00 3.25
3767 5100 6.368516 CGCCAATCTGTCAAAAATAAAATGGT 59.631 34.615 0.00 0.00 0.00 3.55
3768 5101 6.368516 ACGCCAATCTGTCAAAAATAAAATGG 59.631 34.615 0.00 0.00 0.00 3.16
3769 5102 7.329226 AGACGCCAATCTGTCAAAAATAAAATG 59.671 33.333 0.00 0.00 37.58 2.32
3770 5103 7.378181 AGACGCCAATCTGTCAAAAATAAAAT 58.622 30.769 0.00 0.00 37.58 1.82
3771 5104 6.744112 AGACGCCAATCTGTCAAAAATAAAA 58.256 32.000 0.00 0.00 37.58 1.52
3772 5105 6.206634 AGAGACGCCAATCTGTCAAAAATAAA 59.793 34.615 0.00 0.00 37.58 1.40
3773 5106 5.705441 AGAGACGCCAATCTGTCAAAAATAA 59.295 36.000 0.00 0.00 37.58 1.40
3774 5107 5.245531 AGAGACGCCAATCTGTCAAAAATA 58.754 37.500 0.00 0.00 37.58 1.40
3775 5108 4.074970 AGAGACGCCAATCTGTCAAAAAT 58.925 39.130 0.00 0.00 37.58 1.82
3776 5109 3.476552 AGAGACGCCAATCTGTCAAAAA 58.523 40.909 0.00 0.00 37.58 1.94
3777 5110 3.126001 AGAGACGCCAATCTGTCAAAA 57.874 42.857 0.00 0.00 37.58 2.44
3778 5111 2.839486 AGAGACGCCAATCTGTCAAA 57.161 45.000 0.00 0.00 37.58 2.69
3779 5112 5.791336 ATATAGAGACGCCAATCTGTCAA 57.209 39.130 0.00 0.00 37.58 3.18
3780 5113 6.004574 AGTATATAGAGACGCCAATCTGTCA 58.995 40.000 0.00 0.00 37.58 3.58
3781 5114 6.403855 GGAGTATATAGAGACGCCAATCTGTC 60.404 46.154 0.00 0.00 36.79 3.51
3782 5115 5.416326 GGAGTATATAGAGACGCCAATCTGT 59.584 44.000 0.00 0.00 36.79 3.41
3783 5116 5.163602 GGGAGTATATAGAGACGCCAATCTG 60.164 48.000 7.21 0.00 38.40 2.90
3784 5117 4.951094 GGGAGTATATAGAGACGCCAATCT 59.049 45.833 7.21 0.00 38.40 2.40
3785 5118 4.098196 GGGGAGTATATAGAGACGCCAATC 59.902 50.000 7.21 0.00 38.40 2.67
3786 5119 4.024670 GGGGAGTATATAGAGACGCCAAT 58.975 47.826 7.21 0.00 38.40 3.16
3787 5120 3.428532 GGGGAGTATATAGAGACGCCAA 58.571 50.000 7.21 0.00 38.40 4.52
3788 5121 2.291411 GGGGGAGTATATAGAGACGCCA 60.291 54.545 7.21 0.00 38.40 5.69
3789 5122 2.291411 TGGGGGAGTATATAGAGACGCC 60.291 54.545 0.00 0.00 36.13 5.68
3790 5123 3.083122 TGGGGGAGTATATAGAGACGC 57.917 52.381 0.00 0.00 0.00 5.19
3791 5124 4.645588 GGAATGGGGGAGTATATAGAGACG 59.354 50.000 0.00 0.00 0.00 4.18
3792 5125 5.422650 GTGGAATGGGGGAGTATATAGAGAC 59.577 48.000 0.00 0.00 0.00 3.36
3793 5126 5.077300 TGTGGAATGGGGGAGTATATAGAGA 59.923 44.000 0.00 0.00 0.00 3.10
3794 5127 5.342017 TGTGGAATGGGGGAGTATATAGAG 58.658 45.833 0.00 0.00 0.00 2.43
3795 5128 5.363124 TGTGGAATGGGGGAGTATATAGA 57.637 43.478 0.00 0.00 0.00 1.98
3796 5129 6.642733 ATTGTGGAATGGGGGAGTATATAG 57.357 41.667 0.00 0.00 0.00 1.31
3797 5130 8.101309 CATATTGTGGAATGGGGGAGTATATA 57.899 38.462 0.00 0.00 0.00 0.86
3798 5131 6.973642 CATATTGTGGAATGGGGGAGTATAT 58.026 40.000 0.00 0.00 0.00 0.86
3799 5132 6.387192 CATATTGTGGAATGGGGGAGTATA 57.613 41.667 0.00 0.00 0.00 1.47
3800 5133 5.261040 CATATTGTGGAATGGGGGAGTAT 57.739 43.478 0.00 0.00 0.00 2.12
3801 5134 4.722526 CATATTGTGGAATGGGGGAGTA 57.277 45.455 0.00 0.00 0.00 2.59
3802 5135 3.600448 CATATTGTGGAATGGGGGAGT 57.400 47.619 0.00 0.00 0.00 3.85
3808 5141 7.414405 TCAGTATGCACCATATTGTGGAATGG 61.414 42.308 6.43 0.00 43.84 3.16
3809 5142 5.532032 TCAGTATGCACCATATTGTGGAATG 59.468 40.000 6.43 5.55 43.84 2.67
3810 5143 5.693961 TCAGTATGCACCATATTGTGGAAT 58.306 37.500 6.43 0.29 43.84 3.01
3811 5144 5.109500 TCAGTATGCACCATATTGTGGAA 57.891 39.130 6.43 0.00 43.84 3.53
3812 5145 4.769345 TCAGTATGCACCATATTGTGGA 57.231 40.909 6.43 6.34 43.84 4.02
3813 5146 6.395426 AAATCAGTATGCACCATATTGTGG 57.605 37.500 8.85 0.00 45.69 4.17
3814 5147 9.970395 ATAAAAATCAGTATGCACCATATTGTG 57.030 29.630 2.56 2.56 36.12 3.33
3932 5265 8.522830 CGGAGGGAATGCAATATAAAAATATGT 58.477 33.333 0.00 0.00 0.00 2.29
3933 5266 8.522830 ACGGAGGGAATGCAATATAAAAATATG 58.477 33.333 0.00 0.00 0.00 1.78
3934 5267 8.650143 ACGGAGGGAATGCAATATAAAAATAT 57.350 30.769 0.00 0.00 0.00 1.28
3935 5268 7.175990 GGACGGAGGGAATGCAATATAAAAATA 59.824 37.037 0.00 0.00 0.00 1.40
3936 5269 6.015434 GGACGGAGGGAATGCAATATAAAAAT 60.015 38.462 0.00 0.00 0.00 1.82
3937 5270 5.300792 GGACGGAGGGAATGCAATATAAAAA 59.699 40.000 0.00 0.00 0.00 1.94
3938 5271 4.825085 GGACGGAGGGAATGCAATATAAAA 59.175 41.667 0.00 0.00 0.00 1.52
3939 5272 4.141367 TGGACGGAGGGAATGCAATATAAA 60.141 41.667 0.00 0.00 0.00 1.40
3940 5273 3.392947 TGGACGGAGGGAATGCAATATAA 59.607 43.478 0.00 0.00 0.00 0.98
3941 5274 2.976185 TGGACGGAGGGAATGCAATATA 59.024 45.455 0.00 0.00 0.00 0.86
3942 5275 1.774254 TGGACGGAGGGAATGCAATAT 59.226 47.619 0.00 0.00 0.00 1.28
3943 5276 1.208706 TGGACGGAGGGAATGCAATA 58.791 50.000 0.00 0.00 0.00 1.90
3944 5277 0.331278 TTGGACGGAGGGAATGCAAT 59.669 50.000 0.00 0.00 0.00 3.56
3945 5278 0.111446 TTTGGACGGAGGGAATGCAA 59.889 50.000 0.00 0.00 0.00 4.08
3946 5279 0.111446 TTTTGGACGGAGGGAATGCA 59.889 50.000 0.00 0.00 0.00 3.96
3947 5280 1.253100 TTTTTGGACGGAGGGAATGC 58.747 50.000 0.00 0.00 0.00 3.56
3948 5281 4.705023 ACTTATTTTTGGACGGAGGGAATG 59.295 41.667 0.00 0.00 0.00 2.67
3949 5282 4.705023 CACTTATTTTTGGACGGAGGGAAT 59.295 41.667 0.00 0.00 0.00 3.01
3950 5283 4.076394 CACTTATTTTTGGACGGAGGGAA 58.924 43.478 0.00 0.00 0.00 3.97
3951 5284 3.681593 CACTTATTTTTGGACGGAGGGA 58.318 45.455 0.00 0.00 0.00 4.20
3952 5285 2.163613 GCACTTATTTTTGGACGGAGGG 59.836 50.000 0.00 0.00 0.00 4.30
3953 5286 2.163613 GGCACTTATTTTTGGACGGAGG 59.836 50.000 0.00 0.00 0.00 4.30
3954 5287 2.159572 CGGCACTTATTTTTGGACGGAG 60.160 50.000 0.00 0.00 0.00 4.63
3955 5288 1.807742 CGGCACTTATTTTTGGACGGA 59.192 47.619 0.00 0.00 0.00 4.69
3956 5289 1.538075 ACGGCACTTATTTTTGGACGG 59.462 47.619 0.00 0.00 0.00 4.79
3957 5290 2.580589 CACGGCACTTATTTTTGGACG 58.419 47.619 0.00 0.00 0.00 4.79
3958 5291 2.295070 ACCACGGCACTTATTTTTGGAC 59.705 45.455 0.00 0.00 0.00 4.02
3959 5292 2.588620 ACCACGGCACTTATTTTTGGA 58.411 42.857 0.00 0.00 0.00 3.53
3960 5293 3.378911 AACCACGGCACTTATTTTTGG 57.621 42.857 0.00 0.00 0.00 3.28
3961 5294 5.980715 ACTAAAACCACGGCACTTATTTTTG 59.019 36.000 0.00 0.00 0.00 2.44
3962 5295 6.151663 ACTAAAACCACGGCACTTATTTTT 57.848 33.333 0.00 0.00 0.00 1.94
3963 5296 5.777850 ACTAAAACCACGGCACTTATTTT 57.222 34.783 0.00 0.00 0.00 1.82
3964 5297 5.533528 AGAACTAAAACCACGGCACTTATTT 59.466 36.000 0.00 0.00 0.00 1.40
3965 5298 5.067954 AGAACTAAAACCACGGCACTTATT 58.932 37.500 0.00 0.00 0.00 1.40
3966 5299 4.648651 AGAACTAAAACCACGGCACTTAT 58.351 39.130 0.00 0.00 0.00 1.73
3967 5300 4.075963 AGAACTAAAACCACGGCACTTA 57.924 40.909 0.00 0.00 0.00 2.24
3968 5301 2.927028 AGAACTAAAACCACGGCACTT 58.073 42.857 0.00 0.00 0.00 3.16
3969 5302 2.632987 AGAACTAAAACCACGGCACT 57.367 45.000 0.00 0.00 0.00 4.40
3970 5303 5.366829 AATTAGAACTAAAACCACGGCAC 57.633 39.130 0.00 0.00 0.00 5.01
3971 5304 8.042515 AGTATAATTAGAACTAAAACCACGGCA 58.957 33.333 2.25 0.00 0.00 5.69
3972 5305 8.333186 CAGTATAATTAGAACTAAAACCACGGC 58.667 37.037 3.61 0.00 0.00 5.68
3973 5306 9.374838 ACAGTATAATTAGAACTAAAACCACGG 57.625 33.333 3.61 0.00 0.00 4.94
3975 5308 9.983804 GCACAGTATAATTAGAACTAAAACCAC 57.016 33.333 3.61 0.00 0.00 4.16
3976 5309 9.953565 AGCACAGTATAATTAGAACTAAAACCA 57.046 29.630 3.61 0.00 0.00 3.67
3980 5313 9.817809 CTGGAGCACAGTATAATTAGAACTAAA 57.182 33.333 3.61 0.00 42.42 1.85
3997 5330 3.278574 GGCAAACATATACTGGAGCACA 58.721 45.455 0.00 0.00 0.00 4.57
3998 5331 3.278574 TGGCAAACATATACTGGAGCAC 58.721 45.455 0.00 0.00 0.00 4.40
3999 5332 3.054434 ACTGGCAAACATATACTGGAGCA 60.054 43.478 0.00 0.00 0.00 4.26
4000 5333 3.545703 ACTGGCAAACATATACTGGAGC 58.454 45.455 0.00 0.00 0.00 4.70
4001 5334 4.769688 TGACTGGCAAACATATACTGGAG 58.230 43.478 0.00 0.00 0.00 3.86
4002 5335 4.835284 TGACTGGCAAACATATACTGGA 57.165 40.909 0.00 0.00 0.00 3.86
4003 5336 5.415701 ACTTTGACTGGCAAACATATACTGG 59.584 40.000 4.15 0.00 41.37 4.00
4004 5337 6.500684 ACTTTGACTGGCAAACATATACTG 57.499 37.500 4.15 0.00 41.37 2.74
4005 5338 7.370383 CAAACTTTGACTGGCAAACATATACT 58.630 34.615 4.15 0.00 41.37 2.12
4006 5339 6.089417 GCAAACTTTGACTGGCAAACATATAC 59.911 38.462 4.15 0.00 41.37 1.47
4007 5340 6.015519 AGCAAACTTTGACTGGCAAACATATA 60.016 34.615 4.15 0.00 41.37 0.86
4008 5341 4.990426 GCAAACTTTGACTGGCAAACATAT 59.010 37.500 4.15 0.00 41.37 1.78
4009 5342 4.099266 AGCAAACTTTGACTGGCAAACATA 59.901 37.500 4.15 0.00 41.37 2.29
4010 5343 3.118665 AGCAAACTTTGACTGGCAAACAT 60.119 39.130 4.15 0.00 41.37 2.71
4011 5344 2.233431 AGCAAACTTTGACTGGCAAACA 59.767 40.909 4.15 0.00 41.37 2.83
4012 5345 2.892374 AGCAAACTTTGACTGGCAAAC 58.108 42.857 4.15 0.00 41.37 2.93
4013 5346 4.159506 ACTTAGCAAACTTTGACTGGCAAA 59.840 37.500 8.63 8.63 43.89 3.68
4014 5347 3.699038 ACTTAGCAAACTTTGACTGGCAA 59.301 39.130 5.65 0.00 33.88 4.52
4015 5348 3.287222 ACTTAGCAAACTTTGACTGGCA 58.713 40.909 5.65 0.00 0.00 4.92
4016 5349 3.990318 ACTTAGCAAACTTTGACTGGC 57.010 42.857 5.65 0.00 0.00 4.85
4017 5350 5.743872 GTCAAACTTAGCAAACTTTGACTGG 59.256 40.000 14.22 3.59 40.96 4.00
4018 5351 6.321717 TGTCAAACTTAGCAAACTTTGACTG 58.678 36.000 19.07 0.00 42.62 3.51
4019 5352 6.509418 TGTCAAACTTAGCAAACTTTGACT 57.491 33.333 19.07 4.99 42.62 3.41
4020 5353 6.584563 TGTTGTCAAACTTAGCAAACTTTGAC 59.415 34.615 14.47 14.47 42.56 3.18
4021 5354 6.682746 TGTTGTCAAACTTAGCAAACTTTGA 58.317 32.000 5.65 0.00 37.19 2.69
4022 5355 6.942886 TGTTGTCAAACTTAGCAAACTTTG 57.057 33.333 0.00 0.00 37.19 2.77
4023 5356 6.926272 TGTTGTTGTCAAACTTAGCAAACTTT 59.074 30.769 0.00 0.00 37.19 2.66
4024 5357 6.451393 TGTTGTTGTCAAACTTAGCAAACTT 58.549 32.000 0.00 0.00 37.19 2.66
4025 5358 6.019779 TGTTGTTGTCAAACTTAGCAAACT 57.980 33.333 0.00 0.00 37.19 2.66
4026 5359 6.698359 TTGTTGTTGTCAAACTTAGCAAAC 57.302 33.333 0.00 0.00 37.19 2.93
4027 5360 7.897575 ATTTGTTGTTGTCAAACTTAGCAAA 57.102 28.000 0.00 0.00 37.56 3.68
4028 5361 7.897575 AATTTGTTGTTGTCAAACTTAGCAA 57.102 28.000 0.00 0.00 37.56 3.91
4029 5362 7.897575 AAATTTGTTGTTGTCAAACTTAGCA 57.102 28.000 0.00 0.00 37.56 3.49
4033 5366 9.040939 GCCTATAAATTTGTTGTTGTCAAACTT 57.959 29.630 0.00 0.00 37.56 2.66
4034 5367 8.200792 TGCCTATAAATTTGTTGTTGTCAAACT 58.799 29.630 0.00 0.00 37.56 2.66
4035 5368 8.272866 GTGCCTATAAATTTGTTGTTGTCAAAC 58.727 33.333 0.00 0.00 37.56 2.93
4036 5369 8.200792 AGTGCCTATAAATTTGTTGTTGTCAAA 58.799 29.630 0.00 0.00 38.77 2.69
4037 5370 7.721402 AGTGCCTATAAATTTGTTGTTGTCAA 58.279 30.769 0.00 0.00 0.00 3.18
4038 5371 7.283625 AGTGCCTATAAATTTGTTGTTGTCA 57.716 32.000 0.00 0.00 0.00 3.58
4039 5372 8.293867 TGTAGTGCCTATAAATTTGTTGTTGTC 58.706 33.333 0.00 0.00 0.00 3.18
4040 5373 8.172352 TGTAGTGCCTATAAATTTGTTGTTGT 57.828 30.769 0.00 0.00 0.00 3.32
4044 5377 9.897744 CCATATGTAGTGCCTATAAATTTGTTG 57.102 33.333 0.00 0.00 0.00 3.33
4045 5378 9.860650 TCCATATGTAGTGCCTATAAATTTGTT 57.139 29.630 0.00 0.00 0.00 2.83
4046 5379 9.860650 TTCCATATGTAGTGCCTATAAATTTGT 57.139 29.630 0.00 0.00 0.00 2.83
4049 5382 9.466497 CCATTCCATATGTAGTGCCTATAAATT 57.534 33.333 1.24 0.00 0.00 1.82
4050 5383 8.835734 TCCATTCCATATGTAGTGCCTATAAAT 58.164 33.333 1.24 0.00 0.00 1.40
4051 5384 8.213489 TCCATTCCATATGTAGTGCCTATAAA 57.787 34.615 1.24 0.00 0.00 1.40
4052 5385 7.092891 CCTCCATTCCATATGTAGTGCCTATAA 60.093 40.741 1.24 0.00 0.00 0.98
4053 5386 6.384015 CCTCCATTCCATATGTAGTGCCTATA 59.616 42.308 1.24 0.00 0.00 1.31
4054 5387 5.190528 CCTCCATTCCATATGTAGTGCCTAT 59.809 44.000 1.24 0.00 0.00 2.57
4055 5388 4.532126 CCTCCATTCCATATGTAGTGCCTA 59.468 45.833 1.24 0.00 0.00 3.93
4056 5389 3.328931 CCTCCATTCCATATGTAGTGCCT 59.671 47.826 1.24 0.00 0.00 4.75
4057 5390 3.560025 CCCTCCATTCCATATGTAGTGCC 60.560 52.174 1.24 0.00 0.00 5.01
4058 5391 3.327757 TCCCTCCATTCCATATGTAGTGC 59.672 47.826 1.24 0.00 0.00 4.40
4059 5392 4.561530 CGTCCCTCCATTCCATATGTAGTG 60.562 50.000 1.24 0.00 0.00 2.74
4060 5393 3.578716 CGTCCCTCCATTCCATATGTAGT 59.421 47.826 1.24 0.00 0.00 2.73
4061 5394 3.055819 CCGTCCCTCCATTCCATATGTAG 60.056 52.174 1.24 0.00 0.00 2.74
4062 5395 2.903784 CCGTCCCTCCATTCCATATGTA 59.096 50.000 1.24 0.00 0.00 2.29
4063 5396 1.699634 CCGTCCCTCCATTCCATATGT 59.300 52.381 1.24 0.00 0.00 2.29
4064 5397 1.977854 TCCGTCCCTCCATTCCATATG 59.022 52.381 0.00 0.00 0.00 1.78
4065 5398 2.415983 TCCGTCCCTCCATTCCATAT 57.584 50.000 0.00 0.00 0.00 1.78
4066 5399 2.184088 TTCCGTCCCTCCATTCCATA 57.816 50.000 0.00 0.00 0.00 2.74
4067 5400 1.295020 TTTCCGTCCCTCCATTCCAT 58.705 50.000 0.00 0.00 0.00 3.41
4068 5401 1.295020 ATTTCCGTCCCTCCATTCCA 58.705 50.000 0.00 0.00 0.00 3.53
4069 5402 2.486727 GGTATTTCCGTCCCTCCATTCC 60.487 54.545 0.00 0.00 0.00 3.01
4070 5403 2.438392 AGGTATTTCCGTCCCTCCATTC 59.562 50.000 0.00 0.00 41.99 2.67
4071 5404 2.488836 AGGTATTTCCGTCCCTCCATT 58.511 47.619 0.00 0.00 41.99 3.16
4072 5405 2.191981 AGGTATTTCCGTCCCTCCAT 57.808 50.000 0.00 0.00 41.99 3.41
4073 5406 1.961133 AAGGTATTTCCGTCCCTCCA 58.039 50.000 0.00 0.00 41.99 3.86
4074 5407 3.014623 CAAAAGGTATTTCCGTCCCTCC 58.985 50.000 0.00 0.00 41.99 4.30
4075 5408 3.014623 CCAAAAGGTATTTCCGTCCCTC 58.985 50.000 0.00 0.00 41.99 4.30
4076 5409 2.645797 TCCAAAAGGTATTTCCGTCCCT 59.354 45.455 0.00 0.00 41.99 4.20
4077 5410 3.014623 CTCCAAAAGGTATTTCCGTCCC 58.985 50.000 0.00 0.00 41.99 4.46
4078 5411 2.422479 GCTCCAAAAGGTATTTCCGTCC 59.578 50.000 0.00 0.00 41.99 4.79
4079 5412 3.344515 AGCTCCAAAAGGTATTTCCGTC 58.655 45.455 0.00 0.00 41.99 4.79
4080 5413 3.344515 GAGCTCCAAAAGGTATTTCCGT 58.655 45.455 0.87 0.00 41.99 4.69
4081 5414 2.351726 CGAGCTCCAAAAGGTATTTCCG 59.648 50.000 8.47 0.00 41.99 4.30
4082 5415 2.683362 CCGAGCTCCAAAAGGTATTTCC 59.317 50.000 8.47 0.00 35.33 3.13
4083 5416 2.683362 CCCGAGCTCCAAAAGGTATTTC 59.317 50.000 8.47 0.00 35.33 2.17
4084 5417 2.723273 CCCGAGCTCCAAAAGGTATTT 58.277 47.619 8.47 0.00 35.33 1.40
4085 5418 1.682087 GCCCGAGCTCCAAAAGGTATT 60.682 52.381 8.47 0.00 35.33 1.89
4086 5419 0.107165 GCCCGAGCTCCAAAAGGTAT 60.107 55.000 8.47 0.00 35.33 2.73
4087 5420 1.298667 GCCCGAGCTCCAAAAGGTA 59.701 57.895 8.47 0.00 35.33 3.08
4088 5421 2.034221 GCCCGAGCTCCAAAAGGT 59.966 61.111 8.47 0.00 38.79 3.50
4098 5431 4.154347 CCTCACTGGAGCCCGAGC 62.154 72.222 0.00 0.00 39.96 5.03
4099 5432 4.154347 GCCTCACTGGAGCCCGAG 62.154 72.222 0.00 0.00 39.96 4.63
4102 5435 3.791586 GAGGCCTCACTGGAGCCC 61.792 72.222 28.43 0.00 38.96 5.19
4103 5436 3.791586 GGAGGCCTCACTGGAGCC 61.792 72.222 33.29 11.24 39.96 4.70
4104 5437 2.129555 TTTGGAGGCCTCACTGGAGC 62.130 60.000 33.29 15.00 39.96 4.70
4105 5438 0.622665 ATTTGGAGGCCTCACTGGAG 59.377 55.000 33.29 0.00 41.02 3.86
4106 5439 1.004745 GAATTTGGAGGCCTCACTGGA 59.995 52.381 33.29 14.64 38.35 3.86
4107 5440 1.272092 TGAATTTGGAGGCCTCACTGG 60.272 52.381 33.29 0.00 39.35 4.00
4108 5441 2.205022 TGAATTTGGAGGCCTCACTG 57.795 50.000 33.29 0.00 0.00 3.66
4109 5442 2.978156 TTGAATTTGGAGGCCTCACT 57.022 45.000 33.29 12.66 0.00 3.41
4110 5443 4.541973 AATTTGAATTTGGAGGCCTCAC 57.458 40.909 33.29 22.31 0.00 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.