Multiple sequence alignment - TraesCS3B01G538100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G538100 chr3B 100.000 4527 0 0 1 4527 777988820 777993346 0.000000e+00 8360
1 TraesCS3B01G538100 chr3B 94.981 259 9 1 4273 4527 659778603 659778861 1.960000e-108 403
2 TraesCS3B01G538100 chr3B 93.609 266 13 1 4266 4527 559536449 559536714 1.180000e-105 394
3 TraesCS3B01G538100 chr3D 88.580 4317 286 71 46 4217 580724718 580720464 0.000000e+00 5049
4 TraesCS3B01G538100 chr7D 83.721 774 64 25 964 1698 104002738 104003488 0.000000e+00 675
5 TraesCS3B01G538100 chr7A 82.680 791 70 32 967 1718 87206890 87206128 1.370000e-179 640
6 TraesCS3B01G538100 chr7A 81.395 774 78 28 964 1698 204586414 204587160 5.080000e-159 571
7 TraesCS3B01G538100 chr2B 83.009 771 68 25 967 1698 733268012 733267266 1.370000e-179 640
8 TraesCS3B01G538100 chr2B 94.615 260 10 1 4272 4527 694533648 694533907 2.540000e-107 399
9 TraesCS3B01G538100 chr5B 82.368 777 75 27 961 1698 633447045 633447798 1.790000e-173 619
10 TraesCS3B01G538100 chr2A 83.404 705 54 27 1049 1718 759629327 759628651 3.010000e-166 595
11 TraesCS3B01G538100 chr2A 81.163 791 81 29 967 1718 92873166 92872405 1.410000e-159 573
12 TraesCS3B01G538100 chr2A 94.942 257 9 1 4273 4525 723523031 723523287 2.540000e-107 399
13 TraesCS3B01G538100 chr5A 94.922 256 9 1 4274 4525 510187567 510187822 9.130000e-107 398
14 TraesCS3B01G538100 chr4B 94.595 259 10 1 4273 4527 129713018 129713276 9.130000e-107 398
15 TraesCS3B01G538100 chr7B 94.231 260 11 1 4272 4527 632555281 632555022 1.180000e-105 394
16 TraesCS3B01G538100 chr7B 91.429 280 17 4 4252 4527 180046986 180047262 1.190000e-100 377
17 TraesCS3B01G538100 chr3A 94.231 260 11 1 4272 4527 562912948 562913207 1.180000e-105 394
18 TraesCS3B01G538100 chr4A 78.964 637 82 27 1073 1688 612992597 612993202 1.980000e-103 387
19 TraesCS3B01G538100 chr4A 78.906 640 82 24 1073 1690 612970835 612971443 7.100000e-103 385


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G538100 chr3B 777988820 777993346 4526 False 8360 8360 100.000 1 4527 1 chr3B.!!$F3 4526
1 TraesCS3B01G538100 chr3D 580720464 580724718 4254 True 5049 5049 88.580 46 4217 1 chr3D.!!$R1 4171
2 TraesCS3B01G538100 chr7D 104002738 104003488 750 False 675 675 83.721 964 1698 1 chr7D.!!$F1 734
3 TraesCS3B01G538100 chr7A 87206128 87206890 762 True 640 640 82.680 967 1718 1 chr7A.!!$R1 751
4 TraesCS3B01G538100 chr7A 204586414 204587160 746 False 571 571 81.395 964 1698 1 chr7A.!!$F1 734
5 TraesCS3B01G538100 chr2B 733267266 733268012 746 True 640 640 83.009 967 1698 1 chr2B.!!$R1 731
6 TraesCS3B01G538100 chr5B 633447045 633447798 753 False 619 619 82.368 961 1698 1 chr5B.!!$F1 737
7 TraesCS3B01G538100 chr2A 759628651 759629327 676 True 595 595 83.404 1049 1718 1 chr2A.!!$R2 669
8 TraesCS3B01G538100 chr2A 92872405 92873166 761 True 573 573 81.163 967 1718 1 chr2A.!!$R1 751
9 TraesCS3B01G538100 chr4A 612992597 612993202 605 False 387 387 78.964 1073 1688 1 chr4A.!!$F2 615
10 TraesCS3B01G538100 chr4A 612970835 612971443 608 False 385 385 78.906 1073 1690 1 chr4A.!!$F1 617

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
68 72 0.035439 TTGGGCGGGAATGAACTCTC 60.035 55.0 0.00 0.0 0.00 3.20 F
605 632 0.239879 AATGTTTACGGGTGCTTGCG 59.760 50.0 0.00 0.0 0.00 4.85 F
1702 1825 0.676184 TGCAGGTCAGTCAGTCAGTC 59.324 55.0 0.00 0.0 0.00 3.51 F
1945 2073 0.968405 TTGCTGATCCTGGCAAAACC 59.032 50.0 13.05 0.0 44.01 3.27 F
2964 3092 1.656652 CAATGTCAAGAGTAGGCCGG 58.343 55.0 0.00 0.0 0.00 6.13 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1720 1843 0.328258 ATCACCGGTTAAGCAAGCCT 59.672 50.0 2.97 0.0 0.00 4.58 R
2226 2354 0.615331 GCTGACCAGACCAATCCTGA 59.385 55.0 0.47 0.0 33.65 3.86 R
2950 3078 0.830648 CAATCCCGGCCTACTCTTGA 59.169 55.0 0.00 0.0 0.00 3.02 R
3382 3518 1.633915 CCTGATCCTTCAGCTGCCCT 61.634 60.0 9.47 0.0 46.76 5.19 R
4493 4647 0.028902 GTCACGCCTGTTTGGTTGTC 59.971 55.0 0.00 0.0 38.35 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
37 38 9.411189 TGAATCTGAATTCATTCAATATGGTGA 57.589 29.630 17.97 5.34 44.94 4.02
68 72 0.035439 TTGGGCGGGAATGAACTCTC 60.035 55.000 0.00 0.00 0.00 3.20
79 83 1.538047 TGAACTCTCATTTGGCTGCC 58.462 50.000 12.87 12.87 0.00 4.85
82 86 1.760192 ACTCTCATTTGGCTGCCATC 58.240 50.000 24.03 0.00 31.53 3.51
98 102 2.802774 GCCATCTAGTCAGCTCAGCTTC 60.803 54.545 0.00 0.00 36.40 3.86
99 103 2.429971 CCATCTAGTCAGCTCAGCTTCA 59.570 50.000 0.00 0.00 36.40 3.02
113 117 1.153549 CTTCAGCTAGCCCCGTCAC 60.154 63.158 12.13 0.00 0.00 3.67
114 118 2.890847 CTTCAGCTAGCCCCGTCACG 62.891 65.000 12.13 0.00 0.00 4.35
115 119 3.449227 CAGCTAGCCCCGTCACGA 61.449 66.667 12.13 0.00 0.00 4.35
116 120 2.678934 AGCTAGCCCCGTCACGAA 60.679 61.111 12.13 0.00 0.00 3.85
123 127 1.671054 CCCCGTCACGAAAGCATGT 60.671 57.895 0.00 0.00 0.00 3.21
124 128 1.497278 CCCGTCACGAAAGCATGTG 59.503 57.895 0.00 0.00 37.44 3.21
130 134 1.597195 TCACGAAAGCATGTGTGTGTC 59.403 47.619 0.00 0.00 37.38 3.67
147 151 6.763135 GTGTGTGTCCATATGAATAGTGATGT 59.237 38.462 3.65 0.00 0.00 3.06
153 157 8.803235 TGTCCATATGAATAGTGATGTAGGTAC 58.197 37.037 3.65 0.00 0.00 3.34
154 158 8.803235 GTCCATATGAATAGTGATGTAGGTACA 58.197 37.037 3.65 0.00 40.98 2.90
158 162 4.037565 TGAATAGTGATGTAGGTACAGCCG 59.962 45.833 3.07 0.00 41.60 5.52
159 163 1.112113 AGTGATGTAGGTACAGCCGG 58.888 55.000 0.00 0.00 41.60 6.13
161 165 2.026641 GTGATGTAGGTACAGCCGGTA 58.973 52.381 1.90 0.00 41.60 4.02
162 166 2.428171 GTGATGTAGGTACAGCCGGTAA 59.572 50.000 1.90 0.00 41.60 2.85
186 190 2.280628 GGGTTAAGGAACATGCGAGAG 58.719 52.381 0.00 0.00 37.29 3.20
187 191 2.354805 GGGTTAAGGAACATGCGAGAGT 60.355 50.000 0.00 0.00 37.29 3.24
189 193 2.561733 TAAGGAACATGCGAGAGTCG 57.438 50.000 0.00 0.00 43.89 4.18
190 194 0.603569 AAGGAACATGCGAGAGTCGT 59.396 50.000 0.00 0.00 42.81 4.34
191 195 0.603569 AGGAACATGCGAGAGTCGTT 59.396 50.000 0.00 0.00 42.81 3.85
192 196 1.816835 AGGAACATGCGAGAGTCGTTA 59.183 47.619 0.00 0.00 42.81 3.18
193 197 2.230508 AGGAACATGCGAGAGTCGTTAA 59.769 45.455 0.00 0.00 42.81 2.01
194 198 3.119101 AGGAACATGCGAGAGTCGTTAAT 60.119 43.478 0.00 0.00 42.81 1.40
195 199 3.000322 GGAACATGCGAGAGTCGTTAATG 60.000 47.826 0.00 3.41 42.81 1.90
199 203 4.091509 ACATGCGAGAGTCGTTAATGAAAC 59.908 41.667 0.00 0.00 42.81 2.78
218 232 5.774690 TGAAACAAGCATCCAACCTTAGATT 59.225 36.000 0.00 0.00 0.00 2.40
219 233 6.267471 TGAAACAAGCATCCAACCTTAGATTT 59.733 34.615 0.00 0.00 0.00 2.17
242 256 8.877864 TTTCTAAGTTGTATTTCCACCATCAT 57.122 30.769 0.00 0.00 0.00 2.45
247 261 5.415701 AGTTGTATTTCCACCATCATCACAC 59.584 40.000 0.00 0.00 0.00 3.82
251 265 2.477845 TCCACCATCATCACACACAG 57.522 50.000 0.00 0.00 0.00 3.66
252 266 0.806868 CCACCATCATCACACACAGC 59.193 55.000 0.00 0.00 0.00 4.40
257 271 2.815503 CCATCATCACACACAGCTTTCA 59.184 45.455 0.00 0.00 0.00 2.69
259 273 4.412207 CATCATCACACACAGCTTTCATG 58.588 43.478 0.00 0.00 0.00 3.07
265 279 3.866910 CACACACAGCTTTCATGCTTTTT 59.133 39.130 0.00 0.00 41.98 1.94
278 292 4.943705 TCATGCTTTTTCATAGTGGACCTC 59.056 41.667 0.00 0.00 0.00 3.85
279 293 4.365514 TGCTTTTTCATAGTGGACCTCA 57.634 40.909 0.00 0.00 0.00 3.86
282 296 5.774690 TGCTTTTTCATAGTGGACCTCAATT 59.225 36.000 0.00 0.00 0.00 2.32
295 309 4.948004 GGACCTCAATTAACTAAACCAGGG 59.052 45.833 0.00 0.00 0.00 4.45
305 319 3.844640 ACTAAACCAGGGCAAAGATTGT 58.155 40.909 0.00 0.00 0.00 2.71
325 339 1.361668 CGTGGAGATTGGCAAGACCG 61.362 60.000 5.96 0.00 43.94 4.79
328 342 0.744771 GGAGATTGGCAAGACCGGTC 60.745 60.000 27.67 27.67 43.94 4.79
330 344 1.749258 GATTGGCAAGACCGGTCCC 60.749 63.158 30.82 24.05 43.94 4.46
361 375 3.307242 CGACGAAATGGTTGAGATCCTTC 59.693 47.826 0.00 0.00 0.00 3.46
362 376 3.262420 ACGAAATGGTTGAGATCCTTCG 58.738 45.455 0.00 0.00 38.06 3.79
367 381 3.981071 TGGTTGAGATCCTTCGAACAT 57.019 42.857 0.00 0.00 0.00 2.71
370 384 3.619038 GGTTGAGATCCTTCGAACATCAC 59.381 47.826 12.70 8.29 0.00 3.06
374 388 4.403752 TGAGATCCTTCGAACATCACTCAT 59.596 41.667 12.70 0.00 0.00 2.90
385 399 6.703165 TCGAACATCACTCATTTATGATCAGG 59.297 38.462 0.09 0.00 36.02 3.86
397 411 5.779241 TTATGATCAGGTTGGAGAAAGGT 57.221 39.130 0.09 0.00 0.00 3.50
402 416 1.351017 CAGGTTGGAGAAAGGTAGGCA 59.649 52.381 0.00 0.00 0.00 4.75
403 417 1.351350 AGGTTGGAGAAAGGTAGGCAC 59.649 52.381 0.00 0.00 0.00 5.01
407 421 0.458025 GGAGAAAGGTAGGCACGACG 60.458 60.000 0.00 0.00 33.81 5.12
409 423 1.134560 GAGAAAGGTAGGCACGACGAT 59.865 52.381 0.00 0.00 33.81 3.73
412 426 2.001361 AAGGTAGGCACGACGATCCG 62.001 60.000 0.00 0.00 33.81 4.18
413 427 2.654404 GTAGGCACGACGATCCGC 60.654 66.667 0.00 0.00 0.00 5.54
414 428 3.135457 TAGGCACGACGATCCGCA 61.135 61.111 0.00 0.00 0.00 5.69
431 445 7.134815 CGATCCGCAATAAATCAAGAAGAAAT 58.865 34.615 0.00 0.00 0.00 2.17
438 452 3.739401 AATCAAGAAGAAATCGGGGGT 57.261 42.857 0.00 0.00 0.00 4.95
440 454 1.982226 TCAAGAAGAAATCGGGGGTCA 59.018 47.619 0.00 0.00 0.00 4.02
454 468 2.103941 GGGGGTCATAAGAGAAGCTCAG 59.896 54.545 0.00 0.00 32.06 3.35
484 498 7.711339 GTGAGATTCTAGACGGTTAATGGAATT 59.289 37.037 0.00 0.00 41.28 2.17
485 499 7.926555 TGAGATTCTAGACGGTTAATGGAATTC 59.073 37.037 0.00 0.00 37.87 2.17
488 502 2.914059 AGACGGTTAATGGAATTCCGG 58.086 47.619 19.57 0.00 45.03 5.14
493 507 4.157105 ACGGTTAATGGAATTCCGGAAAAG 59.843 41.667 23.08 10.32 45.03 2.27
498 512 4.536295 ATGGAATTCCGGAAAAGGGTAT 57.464 40.909 23.08 8.44 39.43 2.73
508 522 6.536447 TCCGGAAAAGGGTATATAATGGAAC 58.464 40.000 0.00 0.00 0.00 3.62
519 533 6.015519 GGTATATAATGGAACTGCAATGCCAA 60.016 38.462 0.00 0.00 33.51 4.52
533 547 0.383949 TGCCAACCGAAAAGAGTTGC 59.616 50.000 0.00 0.00 41.61 4.17
536 550 1.333791 CCAACCGAAAAGAGTTGCGTC 60.334 52.381 0.00 0.00 41.61 5.19
555 581 9.073266 GTTGCGTCAAAATATAAAACGTTTTTC 57.927 29.630 29.42 9.51 35.85 2.29
570 597 5.348164 ACGTTTTTCCAGTTCAAATTGAGG 58.652 37.500 0.00 0.00 0.00 3.86
591 618 5.948842 AGGGAGGTAGTACAAAACAATGTT 58.051 37.500 2.06 0.00 34.75 2.71
593 620 7.519927 AGGGAGGTAGTACAAAACAATGTTTA 58.480 34.615 12.11 0.00 34.75 2.01
605 632 0.239879 AATGTTTACGGGTGCTTGCG 59.760 50.000 0.00 0.00 0.00 4.85
633 664 4.036971 TGGATCGTGTTTGTTTGTTTAGGG 59.963 41.667 0.00 0.00 0.00 3.53
650 681 1.524482 GGTCTGCTCTCCATGGGAC 59.476 63.158 13.02 9.88 0.00 4.46
651 682 0.980231 GGTCTGCTCTCCATGGGACT 60.980 60.000 13.02 0.00 0.00 3.85
652 683 0.908198 GTCTGCTCTCCATGGGACTT 59.092 55.000 13.02 0.00 0.00 3.01
653 684 1.280421 GTCTGCTCTCCATGGGACTTT 59.720 52.381 13.02 0.00 0.00 2.66
695 726 2.103538 GCCGTCGAGCGTATCCAA 59.896 61.111 0.00 0.00 39.32 3.53
723 754 6.593770 AGTCCAATCCAAACAAACAAAAGAAC 59.406 34.615 0.00 0.00 0.00 3.01
728 759 7.977789 ATCCAAACAAACAAAAGAACAAACT 57.022 28.000 0.00 0.00 0.00 2.66
735 766 6.926272 ACAAACAAAAGAACAAACTTAGCACA 59.074 30.769 0.00 0.00 0.00 4.57
764 795 1.665169 CGGTCGCAAACATGATGATGA 59.335 47.619 0.00 0.00 33.36 2.92
774 805 6.572119 GCAAACATGATGATGAAGGTGGTTTA 60.572 38.462 0.00 0.00 33.36 2.01
801 832 3.657398 AAACATGATGATGGAGGAGCA 57.343 42.857 0.00 0.00 33.39 4.26
950 1006 1.003718 CAACAACTCCCTCCCCGAC 60.004 63.158 0.00 0.00 0.00 4.79
962 1020 1.831736 CTCCCCGACTCCAAACAGTAT 59.168 52.381 0.00 0.00 0.00 2.12
965 1023 1.470979 CCCGACTCCAAACAGTATCCG 60.471 57.143 0.00 0.00 0.00 4.18
996 1054 3.228017 GCGCCCCTCTCCTACTCC 61.228 72.222 0.00 0.00 0.00 3.85
1258 1351 2.208431 CAATCTGATTCACCTCGCCTC 58.792 52.381 0.00 0.00 0.00 4.70
1259 1352 1.489481 ATCTGATTCACCTCGCCTCA 58.511 50.000 0.00 0.00 0.00 3.86
1261 1354 0.803768 CTGATTCACCTCGCCTCACG 60.804 60.000 0.00 0.00 45.62 4.35
1272 1370 1.755008 GCCTCACGCCCTCTACTCT 60.755 63.158 0.00 0.00 0.00 3.24
1283 1381 2.159028 CCCTCTACTCTAAGCAGCCAAC 60.159 54.545 0.00 0.00 0.00 3.77
1284 1382 2.480416 CCTCTACTCTAAGCAGCCAACG 60.480 54.545 0.00 0.00 0.00 4.10
1312 1418 3.123804 GTCTGTCTGTCACGTGTTCAAT 58.876 45.455 16.51 0.00 0.00 2.57
1329 1436 2.890945 TCAATCTTGACAGACACTCCGA 59.109 45.455 0.00 0.00 31.01 4.55
1343 1450 0.805614 CTCCGAGTCTCACGTGATGT 59.194 55.000 20.40 6.42 0.00 3.06
1344 1451 1.200252 CTCCGAGTCTCACGTGATGTT 59.800 52.381 20.40 7.13 0.00 2.71
1345 1452 1.611977 TCCGAGTCTCACGTGATGTTT 59.388 47.619 20.40 5.19 0.00 2.83
1346 1453 2.035449 TCCGAGTCTCACGTGATGTTTT 59.965 45.455 20.40 3.29 0.00 2.43
1347 1454 2.408704 CCGAGTCTCACGTGATGTTTTC 59.591 50.000 20.40 11.36 0.00 2.29
1374 1481 2.802787 ACTTCTCGTCTCAGGTTGTG 57.197 50.000 0.00 0.00 0.00 3.33
1379 1486 1.372997 CGTCTCAGGTTGTGGACGG 60.373 63.158 14.29 0.00 44.92 4.79
1426 1533 1.004745 AGCCCCAGATTGGTAAGTGTG 59.995 52.381 0.00 0.00 35.17 3.82
1429 1536 2.359900 CCCAGATTGGTAAGTGTGCTC 58.640 52.381 0.00 0.00 35.17 4.26
1434 1541 5.423015 CAGATTGGTAAGTGTGCTCAGTAT 58.577 41.667 0.00 0.00 0.00 2.12
1439 1546 8.807948 ATTGGTAAGTGTGCTCAGTATTATTT 57.192 30.769 0.00 0.00 0.00 1.40
1441 1548 8.263940 TGGTAAGTGTGCTCAGTATTATTTTC 57.736 34.615 0.00 0.00 0.00 2.29
1444 1551 6.428385 AGTGTGCTCAGTATTATTTTCAGC 57.572 37.500 0.00 0.00 0.00 4.26
1468 1575 3.574284 CCGAAGGCAATCAATCAAACA 57.426 42.857 0.00 0.00 46.14 2.83
1475 1582 4.081862 AGGCAATCAATCAAACACTGATGG 60.082 41.667 0.00 0.00 44.43 3.51
1488 1595 1.970917 CTGATGGGTCTCGCAAACGC 61.971 60.000 0.00 0.00 39.84 4.84
1496 1603 1.790623 GTCTCGCAAACGCTTGTTCTA 59.209 47.619 0.00 0.00 39.84 2.10
1506 1613 6.090358 GCAAACGCTTGTTCTAGACATAGTAA 59.910 38.462 0.00 0.00 38.26 2.24
1511 1618 6.255670 CGCTTGTTCTAGACATAGTAATTGCA 59.744 38.462 0.00 0.00 38.26 4.08
1517 1624 9.967346 GTTCTAGACATAGTAATTGCATAGTCA 57.033 33.333 12.21 2.17 0.00 3.41
1657 1779 3.949132 AGAAAAGCTTCTGGTCTCCATC 58.051 45.455 0.00 0.00 40.54 3.51
1699 1822 2.369860 AGATTTGCAGGTCAGTCAGTCA 59.630 45.455 3.65 0.00 0.00 3.41
1700 1823 2.245159 TTTGCAGGTCAGTCAGTCAG 57.755 50.000 0.00 0.00 0.00 3.51
1701 1824 1.123077 TTGCAGGTCAGTCAGTCAGT 58.877 50.000 0.00 0.00 0.00 3.41
1702 1825 0.676184 TGCAGGTCAGTCAGTCAGTC 59.324 55.000 0.00 0.00 0.00 3.51
1720 1843 4.530553 TCAGTCTGCATTCAGGGTTTACTA 59.469 41.667 0.00 0.00 40.69 1.82
1721 1844 4.872691 CAGTCTGCATTCAGGGTTTACTAG 59.127 45.833 0.00 0.00 40.69 2.57
1726 1849 3.378427 GCATTCAGGGTTTACTAGGCTTG 59.622 47.826 0.00 0.00 0.00 4.01
1733 1861 3.693085 GGGTTTACTAGGCTTGCTTAACC 59.307 47.826 14.48 14.48 34.48 2.85
1755 1883 3.369471 CGGTGATTCAGGGTATTCACTGT 60.369 47.826 1.15 0.00 44.69 3.55
1796 1924 5.121454 GCATATTCCAATAGAGAAGAAGCCG 59.879 44.000 0.00 0.00 0.00 5.52
1814 1942 2.086869 CCGACTGATGCCATGTTTCTT 58.913 47.619 0.00 0.00 0.00 2.52
1816 1944 3.057315 CCGACTGATGCCATGTTTCTTTT 60.057 43.478 0.00 0.00 0.00 2.27
1817 1945 4.549458 CGACTGATGCCATGTTTCTTTTT 58.451 39.130 0.00 0.00 0.00 1.94
1853 1981 3.624861 GGACATGAAACATCTCGCTTCAT 59.375 43.478 0.00 0.00 40.32 2.57
1864 1992 4.215349 GCTTCATGCGAGCTCCTT 57.785 55.556 8.47 0.00 37.18 3.36
1865 1993 2.475666 GCTTCATGCGAGCTCCTTT 58.524 52.632 8.47 0.00 37.18 3.11
1945 2073 0.968405 TTGCTGATCCTGGCAAAACC 59.032 50.000 13.05 0.00 44.01 3.27
2001 2129 7.628234 ACCAAGCTGATCCTCCATTTATATAG 58.372 38.462 0.00 0.00 0.00 1.31
2056 2184 4.640201 CACCTTACCATGTACTCCATTTGG 59.360 45.833 0.00 0.00 0.00 3.28
2108 2236 8.050930 AGACGTTTGTAAAATTACCCTCCATAT 58.949 33.333 0.00 0.00 32.72 1.78
2134 2262 2.161855 CCAAAGTTGAGCCATGCACTA 58.838 47.619 0.00 0.00 0.00 2.74
2144 2272 2.689983 AGCCATGCACTATTTTGCCTAC 59.310 45.455 0.00 0.00 42.25 3.18
2159 2287 8.738645 ATTTTGCCTACCTAAGAATAAGACTG 57.261 34.615 0.00 0.00 0.00 3.51
2325 2453 6.765036 CAGGTAAACATATGCAGATCTGTCTT 59.235 38.462 23.38 15.20 30.42 3.01
2340 2468 9.482627 CAGATCTGTCTTCTGTAAACTTACTTT 57.517 33.333 14.95 0.00 36.64 2.66
2382 2510 9.984190 TTAACTACACTACACACATAATGTTGA 57.016 29.630 0.00 0.00 40.64 3.18
2409 2537 4.698201 TTGTGAACCTATCAGTTGACCA 57.302 40.909 0.00 0.00 39.19 4.02
2444 2572 6.553852 GGTGATCTCCCTTTAGTGATACCTTA 59.446 42.308 2.14 0.00 0.00 2.69
2530 2658 7.938140 TTCCTAATTGAAATGTCGAGGATTT 57.062 32.000 2.65 2.65 31.87 2.17
2531 2659 7.938140 TCCTAATTGAAATGTCGAGGATTTT 57.062 32.000 4.30 0.00 0.00 1.82
2533 2661 9.627123 TCCTAATTGAAATGTCGAGGATTTTAT 57.373 29.630 4.30 0.58 0.00 1.40
2628 2756 6.554334 ACGTGCAACACATTATCTACTTTT 57.446 33.333 0.00 0.00 35.74 2.27
2630 2758 5.283717 CGTGCAACACATTATCTACTTTTGC 59.716 40.000 0.00 0.00 38.83 3.68
2635 2763 8.427774 GCAACACATTATCTACTTTTGCTTTTC 58.572 33.333 0.00 0.00 36.13 2.29
2718 2846 5.186256 TGCCTGGTGGAATTACTAAATGA 57.814 39.130 0.00 0.00 34.57 2.57
2722 2850 5.067805 CCTGGTGGAATTACTAAATGAAGGC 59.932 44.000 0.00 0.00 34.57 4.35
2723 2851 5.575157 TGGTGGAATTACTAAATGAAGGCA 58.425 37.500 0.00 0.00 0.00 4.75
2737 2865 7.617041 AAATGAAGGCAGTATCACTAGAAAC 57.383 36.000 0.00 0.00 0.00 2.78
2783 2911 6.631971 TTCTTGCTGATGTTGTTTCATGTA 57.368 33.333 0.00 0.00 0.00 2.29
2820 2948 2.687935 GGGAGAGACAGCTACTGAGAAG 59.312 54.545 0.78 0.00 35.18 2.85
2916 3044 3.270877 GGTTACTGGCTTGAGGTATGTG 58.729 50.000 0.00 0.00 0.00 3.21
2964 3092 1.656652 CAATGTCAAGAGTAGGCCGG 58.343 55.000 0.00 0.00 0.00 6.13
3155 3283 9.537192 CCATATTCTGTTATTTTACGTAGTCCA 57.463 33.333 0.00 0.00 43.93 4.02
3160 3288 6.819649 TCTGTTATTTTACGTAGTCCATTGGG 59.180 38.462 2.09 0.00 43.93 4.12
3194 3322 6.828273 TGCATAGTTATTAAGCTGGAATGTGT 59.172 34.615 4.70 0.00 0.00 3.72
3208 3336 4.634004 TGGAATGTGTATAGTTCCTTTGCG 59.366 41.667 5.14 0.00 41.52 4.85
3288 3424 6.857964 CAGTATCCTGTTTGTCATTTGTTGAC 59.142 38.462 0.00 0.00 43.00 3.18
3332 3468 6.318144 ACCTCTTTTTGTCATATGATCTGCTG 59.682 38.462 9.02 0.00 0.00 4.41
3382 3518 0.108520 GCGAGACGGGTAAACATCCA 60.109 55.000 0.00 0.00 0.00 3.41
3484 3620 2.919666 GCACACTGATAAATGCCGTT 57.080 45.000 0.00 0.00 31.71 4.44
3529 3665 5.959652 GAGAGCTCTCGAAAAATTAGACC 57.040 43.478 27.19 0.63 32.78 3.85
3571 3707 6.318900 GCCAGTATTAGGTTTGCTACAATTCT 59.681 38.462 0.00 0.00 0.00 2.40
3608 3744 9.553064 GGTGTAGACATGATTTATGAGATCTTT 57.447 33.333 0.00 0.00 39.21 2.52
3635 3771 5.977635 TCTCAGACTCAAAACAAGTTCTCA 58.022 37.500 0.00 0.00 0.00 3.27
3654 3790 7.831193 AGTTCTCAACATATTTTGCTGGTCTAT 59.169 33.333 0.00 0.00 0.00 1.98
3656 3792 6.479990 TCTCAACATATTTTGCTGGTCTATCG 59.520 38.462 0.00 0.00 0.00 2.92
3657 3793 6.345298 TCAACATATTTTGCTGGTCTATCGA 58.655 36.000 0.00 0.00 0.00 3.59
3658 3794 6.479990 TCAACATATTTTGCTGGTCTATCGAG 59.520 38.462 0.00 0.00 0.00 4.04
3659 3795 5.918608 ACATATTTTGCTGGTCTATCGAGT 58.081 37.500 0.00 0.00 0.00 4.18
3660 3796 5.755375 ACATATTTTGCTGGTCTATCGAGTG 59.245 40.000 0.00 0.00 0.00 3.51
3661 3797 3.953712 TTTTGCTGGTCTATCGAGTGA 57.046 42.857 0.00 0.00 0.00 3.41
3680 3816 7.041440 TCGAGTGATGTGTGATGTTACAAAAAT 60.041 33.333 0.00 0.00 31.36 1.82
3689 3825 6.988580 TGTGATGTTACAAAAATTTGGCATGA 59.011 30.769 10.38 3.95 42.34 3.07
3711 3847 5.418524 TGAATTAACCTGTGCTTGCATACAT 59.581 36.000 0.00 0.00 0.00 2.29
3712 3848 4.700268 TTAACCTGTGCTTGCATACATG 57.300 40.909 0.00 0.00 0.00 3.21
3714 3850 1.272092 ACCTGTGCTTGCATACATGGT 60.272 47.619 0.00 9.67 0.00 3.55
3716 3852 2.355756 CCTGTGCTTGCATACATGGTAC 59.644 50.000 0.00 0.00 0.00 3.34
3718 3854 2.026356 TGTGCTTGCATACATGGTACCT 60.026 45.455 14.36 0.00 0.00 3.08
3720 3856 3.809832 GTGCTTGCATACATGGTACCTAG 59.190 47.826 14.36 8.03 0.00 3.02
3721 3857 3.454447 TGCTTGCATACATGGTACCTAGT 59.546 43.478 14.36 13.66 0.00 2.57
3722 3858 3.809832 GCTTGCATACATGGTACCTAGTG 59.190 47.826 14.36 11.68 0.00 2.74
3723 3859 3.469008 TGCATACATGGTACCTAGTGC 57.531 47.619 14.36 15.51 0.00 4.40
3724 3860 3.038280 TGCATACATGGTACCTAGTGCT 58.962 45.455 14.36 1.54 32.87 4.40
3725 3861 3.069586 TGCATACATGGTACCTAGTGCTC 59.930 47.826 14.36 5.73 32.87 4.26
3726 3862 3.069586 GCATACATGGTACCTAGTGCTCA 59.930 47.826 14.36 0.00 0.00 4.26
3727 3863 4.262635 GCATACATGGTACCTAGTGCTCAT 60.263 45.833 14.36 0.00 0.00 2.90
3728 3864 5.473931 CATACATGGTACCTAGTGCTCATC 58.526 45.833 14.36 0.00 0.00 2.92
3730 3866 2.543037 TGGTACCTAGTGCTCATCCA 57.457 50.000 14.36 0.00 0.00 3.41
3731 3867 2.827755 TGGTACCTAGTGCTCATCCAA 58.172 47.619 14.36 0.00 0.00 3.53
3732 3868 2.500098 TGGTACCTAGTGCTCATCCAAC 59.500 50.000 14.36 0.00 0.00 3.77
3734 3870 3.134804 GGTACCTAGTGCTCATCCAACAT 59.865 47.826 4.06 0.00 0.00 2.71
3745 3882 4.616835 GCTCATCCAACATTCAAGACAACC 60.617 45.833 0.00 0.00 0.00 3.77
3762 3899 8.298854 CAAGACAACCTCAAATCACATCATTTA 58.701 33.333 0.00 0.00 0.00 1.40
3763 3900 8.048534 AGACAACCTCAAATCACATCATTTAG 57.951 34.615 0.00 0.00 0.00 1.85
3764 3901 6.624423 ACAACCTCAAATCACATCATTTAGC 58.376 36.000 0.00 0.00 0.00 3.09
3771 3908 7.984391 TCAAATCACATCATTTAGCGTATGTT 58.016 30.769 0.00 0.00 30.32 2.71
3777 3914 7.279758 TCACATCATTTAGCGTATGTTCAATCA 59.720 33.333 0.00 0.00 30.32 2.57
3790 3927 7.201635 CGTATGTTCAATCAGTCATCCATTTGA 60.202 37.037 0.00 0.00 0.00 2.69
3829 3966 5.643379 ATGTCATACACACCCACAATTTC 57.357 39.130 0.00 0.00 38.04 2.17
3854 4006 6.279513 TGAACAAAGTTTCCACAACAATCT 57.720 33.333 0.00 0.00 0.00 2.40
3861 4013 5.385198 AGTTTCCACAACAATCTGGTATGT 58.615 37.500 0.00 0.00 0.00 2.29
3862 4014 5.241506 AGTTTCCACAACAATCTGGTATGTG 59.758 40.000 0.00 0.00 40.72 3.21
3873 4025 2.083774 CTGGTATGTGTCGCCATTTGT 58.916 47.619 0.00 0.00 0.00 2.83
3877 4029 5.429130 TGGTATGTGTCGCCATTTGTTATA 58.571 37.500 0.00 0.00 0.00 0.98
3879 4031 6.544197 TGGTATGTGTCGCCATTTGTTATAAT 59.456 34.615 0.00 0.00 0.00 1.28
3908 4060 5.066505 ACACACAGAGAACTTAAAAGCCTTG 59.933 40.000 0.00 0.00 0.00 3.61
3911 4063 6.547510 ACACAGAGAACTTAAAAGCCTTGAAT 59.452 34.615 0.00 0.00 0.00 2.57
3917 4069 6.490040 AGAACTTAAAAGCCTTGAATAGCACA 59.510 34.615 0.00 0.00 0.00 4.57
3922 4075 9.638239 CTTAAAAGCCTTGAATAGCACAAAATA 57.362 29.630 0.00 0.00 0.00 1.40
3938 4091 6.253298 GCACAAAATATCACATGTAATTGCGT 59.747 34.615 0.00 0.00 0.00 5.24
3943 4096 8.564648 AAATATCACATGTAATTGCGTGAATG 57.435 30.769 20.82 10.57 41.39 2.67
3947 4100 3.056962 ACATGTAATTGCGTGAATGCCAA 60.057 39.130 20.82 0.00 0.00 4.52
3992 4145 6.895756 TGTCTTCATACCTACCAAGTGAGTAT 59.104 38.462 0.00 0.00 0.00 2.12
3995 4148 6.027025 TCATACCTACCAAGTGAGTATCCT 57.973 41.667 0.00 0.00 0.00 3.24
4013 4166 1.071228 CCTGCAGCAGGTATATCAGCA 59.929 52.381 30.97 0.00 45.82 4.41
4085 4238 5.624159 TCAAGGATCTTGTCATGTTCAGTT 58.376 37.500 7.42 0.00 0.00 3.16
4106 4259 7.174946 TCAGTTACAAAATCTGGAATCTCAACC 59.825 37.037 0.00 0.00 27.83 3.77
4109 4262 4.697352 ACAAAATCTGGAATCTCAACCTCG 59.303 41.667 0.00 0.00 0.00 4.63
4144 4297 1.203364 CCCCCATAGATACTCCAGCCT 60.203 57.143 0.00 0.00 0.00 4.58
4219 4373 8.915036 AGTGAGTTAGTATATACTGAAAGGTGG 58.085 37.037 23.09 0.00 39.30 4.61
4220 4374 8.142551 GTGAGTTAGTATATACTGAAAGGTGGG 58.857 40.741 23.09 0.00 39.30 4.61
4221 4375 7.842743 TGAGTTAGTATATACTGAAAGGTGGGT 59.157 37.037 23.09 0.00 39.30 4.51
4222 4376 8.019656 AGTTAGTATATACTGAAAGGTGGGTG 57.980 38.462 23.09 0.00 39.30 4.61
4223 4377 5.291905 AGTATATACTGAAAGGTGGGTGC 57.708 43.478 14.71 0.00 39.30 5.01
4224 4378 4.719773 AGTATATACTGAAAGGTGGGTGCA 59.280 41.667 14.71 0.00 39.30 4.57
4225 4379 2.496899 ATACTGAAAGGTGGGTGCAG 57.503 50.000 0.00 0.00 39.30 4.41
4226 4380 1.136828 TACTGAAAGGTGGGTGCAGT 58.863 50.000 0.00 0.00 42.04 4.40
4227 4381 0.258774 ACTGAAAGGTGGGTGCAGTT 59.741 50.000 0.00 0.00 39.30 3.16
4228 4382 1.341976 ACTGAAAGGTGGGTGCAGTTT 60.342 47.619 0.00 0.00 39.30 2.66
4229 4383 1.067516 CTGAAAGGTGGGTGCAGTTTG 59.932 52.381 0.00 0.00 0.00 2.93
4230 4384 0.389025 GAAAGGTGGGTGCAGTTTGG 59.611 55.000 0.00 0.00 0.00 3.28
4231 4385 1.685355 AAAGGTGGGTGCAGTTTGGC 61.685 55.000 0.00 0.00 0.00 4.52
4232 4386 2.521708 GGTGGGTGCAGTTTGGCT 60.522 61.111 0.00 0.00 34.04 4.75
4241 4395 3.631453 CAGTTTGGCTGCACTAGGA 57.369 52.632 0.50 0.00 38.52 2.94
4242 4396 1.446907 CAGTTTGGCTGCACTAGGAG 58.553 55.000 0.50 0.00 38.52 3.69
4243 4397 1.059913 AGTTTGGCTGCACTAGGAGT 58.940 50.000 0.50 0.00 35.34 3.85
4258 4412 6.980416 ACTAGGAGTGAACAGTCTTTTAGT 57.020 37.500 9.11 10.75 0.00 2.24
4259 4413 7.362802 ACTAGGAGTGAACAGTCTTTTAGTT 57.637 36.000 9.11 0.00 0.00 2.24
4260 4414 7.435305 ACTAGGAGTGAACAGTCTTTTAGTTC 58.565 38.462 9.11 0.00 41.42 3.01
4261 4415 6.487299 AGGAGTGAACAGTCTTTTAGTTCT 57.513 37.500 9.11 0.00 41.56 3.01
4262 4416 6.284459 AGGAGTGAACAGTCTTTTAGTTCTG 58.716 40.000 9.11 0.00 41.56 3.02
4263 4417 6.098409 AGGAGTGAACAGTCTTTTAGTTCTGA 59.902 38.462 9.11 0.00 41.56 3.27
4264 4418 6.422400 GGAGTGAACAGTCTTTTAGTTCTGAG 59.578 42.308 9.11 0.00 41.56 3.35
4265 4419 6.879400 AGTGAACAGTCTTTTAGTTCTGAGT 58.121 36.000 0.00 0.00 41.56 3.41
4266 4420 8.008513 AGTGAACAGTCTTTTAGTTCTGAGTA 57.991 34.615 0.00 0.00 41.56 2.59
4267 4421 8.475639 AGTGAACAGTCTTTTAGTTCTGAGTAA 58.524 33.333 0.00 0.00 41.56 2.24
4268 4422 9.095065 GTGAACAGTCTTTTAGTTCTGAGTAAA 57.905 33.333 0.00 0.00 41.56 2.01
4269 4423 9.095065 TGAACAGTCTTTTAGTTCTGAGTAAAC 57.905 33.333 0.00 0.00 41.56 2.01
4270 4424 9.095065 GAACAGTCTTTTAGTTCTGAGTAAACA 57.905 33.333 0.00 0.00 38.79 2.83
4271 4425 9.444600 AACAGTCTTTTAGTTCTGAGTAAACAA 57.555 29.630 0.00 0.00 31.96 2.83
4272 4426 9.444600 ACAGTCTTTTAGTTCTGAGTAAACAAA 57.555 29.630 0.00 0.00 31.96 2.83
4273 4427 9.922305 CAGTCTTTTAGTTCTGAGTAAACAAAG 57.078 33.333 0.00 0.00 31.96 2.77
4274 4428 9.110502 AGTCTTTTAGTTCTGAGTAAACAAAGG 57.889 33.333 0.00 0.00 31.96 3.11
4275 4429 8.343366 GTCTTTTAGTTCTGAGTAAACAAAGGG 58.657 37.037 0.00 0.00 31.96 3.95
4276 4430 6.628919 TTTAGTTCTGAGTAAACAAAGGGC 57.371 37.500 0.00 0.00 0.00 5.19
4277 4431 3.139077 AGTTCTGAGTAAACAAAGGGCG 58.861 45.455 0.00 0.00 0.00 6.13
4278 4432 2.876550 GTTCTGAGTAAACAAAGGGCGT 59.123 45.455 0.00 0.00 0.00 5.68
4279 4433 2.489971 TCTGAGTAAACAAAGGGCGTG 58.510 47.619 0.00 0.00 0.00 5.34
4280 4434 2.158871 TCTGAGTAAACAAAGGGCGTGT 60.159 45.455 0.00 0.00 0.00 4.49
4281 4435 2.616842 CTGAGTAAACAAAGGGCGTGTT 59.383 45.455 0.00 0.00 40.92 3.32
4283 4437 3.181495 TGAGTAAACAAAGGGCGTGTTTG 60.181 43.478 17.61 11.60 46.10 2.93
4284 4438 2.100087 AGTAAACAAAGGGCGTGTTTGG 59.900 45.455 17.61 0.00 46.10 3.28
4285 4439 0.899019 AAACAAAGGGCGTGTTTGGT 59.101 45.000 10.57 1.90 45.19 3.67
4286 4440 0.899019 AACAAAGGGCGTGTTTGGTT 59.101 45.000 9.51 0.00 38.90 3.67
4287 4441 0.458260 ACAAAGGGCGTGTTTGGTTC 59.542 50.000 9.51 0.00 38.90 3.62
4288 4442 0.249280 CAAAGGGCGTGTTTGGTTCC 60.249 55.000 0.00 0.00 32.26 3.62
4289 4443 1.730451 AAAGGGCGTGTTTGGTTCCG 61.730 55.000 0.00 0.00 0.00 4.30
4290 4444 2.592287 GGGCGTGTTTGGTTCCGA 60.592 61.111 0.00 0.00 0.00 4.55
4291 4445 2.188161 GGGCGTGTTTGGTTCCGAA 61.188 57.895 0.00 0.00 0.00 4.30
4292 4446 1.520600 GGGCGTGTTTGGTTCCGAAT 61.521 55.000 0.00 0.00 0.00 3.34
4293 4447 1.158434 GGCGTGTTTGGTTCCGAATA 58.842 50.000 0.00 0.00 0.00 1.75
4294 4448 1.536331 GGCGTGTTTGGTTCCGAATAA 59.464 47.619 0.00 0.00 0.00 1.40
4295 4449 2.413634 GGCGTGTTTGGTTCCGAATAAG 60.414 50.000 0.00 0.00 0.00 1.73
4296 4450 2.224784 GCGTGTTTGGTTCCGAATAAGT 59.775 45.455 0.00 0.00 0.00 2.24
4297 4451 3.666111 GCGTGTTTGGTTCCGAATAAGTC 60.666 47.826 0.00 0.00 0.00 3.01
4298 4452 3.495377 CGTGTTTGGTTCCGAATAAGTCA 59.505 43.478 0.00 0.00 0.00 3.41
4299 4453 4.609783 CGTGTTTGGTTCCGAATAAGTCAC 60.610 45.833 0.00 0.00 0.00 3.67
4300 4454 3.816523 TGTTTGGTTCCGAATAAGTCACC 59.183 43.478 0.00 0.00 0.00 4.02
4301 4455 3.773418 TTGGTTCCGAATAAGTCACCA 57.227 42.857 0.00 0.00 32.35 4.17
4302 4456 3.773418 TGGTTCCGAATAAGTCACCAA 57.227 42.857 0.00 0.00 31.24 3.67
4303 4457 3.404899 TGGTTCCGAATAAGTCACCAAC 58.595 45.455 0.00 0.00 31.24 3.77
4304 4458 3.071892 TGGTTCCGAATAAGTCACCAACT 59.928 43.478 0.00 0.00 41.10 3.16
4346 4500 7.913674 AAAAAGTGACTTATTTTGCCAAACA 57.086 28.000 0.00 0.00 0.00 2.83
4347 4501 7.538303 AAAAGTGACTTATTTTGCCAAACAG 57.462 32.000 0.00 0.00 0.00 3.16
4348 4502 6.463995 AAGTGACTTATTTTGCCAAACAGA 57.536 33.333 0.00 0.00 0.00 3.41
4349 4503 5.831997 AGTGACTTATTTTGCCAAACAGAC 58.168 37.500 0.00 0.00 0.00 3.51
4350 4504 4.982295 GTGACTTATTTTGCCAAACAGACC 59.018 41.667 0.00 0.00 0.00 3.85
4351 4505 4.038642 TGACTTATTTTGCCAAACAGACCC 59.961 41.667 0.00 0.00 0.00 4.46
4352 4506 3.005367 ACTTATTTTGCCAAACAGACCCG 59.995 43.478 0.00 0.00 0.00 5.28
4353 4507 1.698506 ATTTTGCCAAACAGACCCGA 58.301 45.000 0.00 0.00 0.00 5.14
4354 4508 0.741915 TTTTGCCAAACAGACCCGAC 59.258 50.000 0.00 0.00 0.00 4.79
4355 4509 0.106918 TTTGCCAAACAGACCCGACT 60.107 50.000 0.00 0.00 0.00 4.18
4356 4510 0.106918 TTGCCAAACAGACCCGACTT 60.107 50.000 0.00 0.00 0.00 3.01
4357 4511 0.759959 TGCCAAACAGACCCGACTTA 59.240 50.000 0.00 0.00 0.00 2.24
4358 4512 1.349688 TGCCAAACAGACCCGACTTAT 59.650 47.619 0.00 0.00 0.00 1.73
4359 4513 2.568062 TGCCAAACAGACCCGACTTATA 59.432 45.455 0.00 0.00 0.00 0.98
4360 4514 3.008157 TGCCAAACAGACCCGACTTATAA 59.992 43.478 0.00 0.00 0.00 0.98
4361 4515 3.621715 GCCAAACAGACCCGACTTATAAG 59.378 47.826 11.05 11.05 0.00 1.73
4362 4516 4.828829 CCAAACAGACCCGACTTATAAGT 58.171 43.478 18.05 18.05 43.16 2.24
4381 4535 5.836024 AAGTCACCCCAACTTATAAGTCA 57.164 39.130 18.28 0.00 38.57 3.41
4382 4536 6.388619 AAGTCACCCCAACTTATAAGTCAT 57.611 37.500 18.28 1.19 38.57 3.06
4383 4537 7.504926 AAGTCACCCCAACTTATAAGTCATA 57.495 36.000 18.28 0.00 38.57 2.15
4384 4538 7.504926 AGTCACCCCAACTTATAAGTCATAA 57.495 36.000 18.28 0.00 38.57 1.90
4394 4548 5.690865 CTTATAAGTCATAAGTTGCCCCCA 58.309 41.667 4.18 0.00 40.84 4.96
4395 4549 2.990740 AAGTCATAAGTTGCCCCCAA 57.009 45.000 0.00 0.00 0.00 4.12
4405 4559 3.830744 GTTGCCCCCAACTTAAAACTT 57.169 42.857 0.00 0.00 46.13 2.66
4406 4560 4.940905 GTTGCCCCCAACTTAAAACTTA 57.059 40.909 0.00 0.00 46.13 2.24
4407 4561 5.477607 GTTGCCCCCAACTTAAAACTTAT 57.522 39.130 0.00 0.00 46.13 1.73
4408 4562 6.593268 GTTGCCCCCAACTTAAAACTTATA 57.407 37.500 0.00 0.00 46.13 0.98
4409 4563 6.995364 GTTGCCCCCAACTTAAAACTTATAA 58.005 36.000 0.00 0.00 46.13 0.98
4410 4564 6.844097 TGCCCCCAACTTAAAACTTATAAG 57.156 37.500 11.05 11.05 36.62 1.73
4411 4565 6.316513 TGCCCCCAACTTAAAACTTATAAGT 58.683 36.000 12.50 12.50 43.57 2.24
4412 4566 6.434965 TGCCCCCAACTTAAAACTTATAAGTC 59.565 38.462 18.28 1.97 41.49 3.01
4413 4567 6.434965 GCCCCCAACTTAAAACTTATAAGTCA 59.565 38.462 18.28 4.72 41.49 3.41
4414 4568 7.576287 GCCCCCAACTTAAAACTTATAAGTCAC 60.576 40.741 18.28 0.00 41.49 3.67
4415 4569 7.094075 CCCCCAACTTAAAACTTATAAGTCACC 60.094 40.741 18.28 0.00 41.49 4.02
4416 4570 7.094075 CCCCAACTTAAAACTTATAAGTCACCC 60.094 40.741 18.28 0.00 41.49 4.61
4417 4571 7.094075 CCCAACTTAAAACTTATAAGTCACCCC 60.094 40.741 18.28 0.00 41.49 4.95
4418 4572 7.668469 CCAACTTAAAACTTATAAGTCACCCCT 59.332 37.037 18.28 0.00 41.49 4.79
4419 4573 9.074576 CAACTTAAAACTTATAAGTCACCCCTT 57.925 33.333 18.28 5.47 41.49 3.95
4420 4574 9.650714 AACTTAAAACTTATAAGTCACCCCTTT 57.349 29.630 18.28 15.02 41.49 3.11
4421 4575 9.650714 ACTTAAAACTTATAAGTCACCCCTTTT 57.349 29.630 18.28 14.40 38.85 2.27
4424 4578 5.977489 ACTTATAAGTCACCCCTTTTTGC 57.023 39.130 12.50 0.00 32.86 3.68
4425 4579 4.457949 ACTTATAAGTCACCCCTTTTTGCG 59.542 41.667 12.50 0.00 32.86 4.85
4426 4580 2.351706 TAAGTCACCCCTTTTTGCGT 57.648 45.000 0.00 0.00 0.00 5.24
4427 4581 0.744281 AAGTCACCCCTTTTTGCGTG 59.256 50.000 0.00 0.00 0.00 5.34
4428 4582 1.106944 AGTCACCCCTTTTTGCGTGG 61.107 55.000 0.00 0.00 0.00 4.94
4429 4583 1.104577 GTCACCCCTTTTTGCGTGGA 61.105 55.000 0.00 0.00 0.00 4.02
4430 4584 0.178975 TCACCCCTTTTTGCGTGGAT 60.179 50.000 0.00 0.00 0.00 3.41
4431 4585 0.243636 CACCCCTTTTTGCGTGGATC 59.756 55.000 0.00 0.00 0.00 3.36
4432 4586 0.898326 ACCCCTTTTTGCGTGGATCC 60.898 55.000 4.20 4.20 0.00 3.36
4433 4587 1.604147 CCCCTTTTTGCGTGGATCCC 61.604 60.000 9.90 0.00 0.00 3.85
4434 4588 0.897863 CCCTTTTTGCGTGGATCCCA 60.898 55.000 9.90 0.00 0.00 4.37
4445 4599 1.487300 TGGATCCCACCATTTGCATG 58.513 50.000 9.90 0.00 34.77 4.06
4446 4600 1.006878 TGGATCCCACCATTTGCATGA 59.993 47.619 9.90 0.00 34.77 3.07
4447 4601 2.322658 GGATCCCACCATTTGCATGAT 58.677 47.619 0.00 0.00 31.07 2.45
4448 4602 2.036733 GGATCCCACCATTTGCATGATG 59.963 50.000 0.00 0.00 31.07 3.07
4449 4603 2.234896 TCCCACCATTTGCATGATGT 57.765 45.000 0.00 0.00 31.07 3.06
4450 4604 2.538222 TCCCACCATTTGCATGATGTT 58.462 42.857 0.00 0.00 31.07 2.71
4451 4605 2.234168 TCCCACCATTTGCATGATGTTG 59.766 45.455 0.00 5.75 31.07 3.33
4452 4606 2.234168 CCCACCATTTGCATGATGTTGA 59.766 45.455 8.94 0.00 31.07 3.18
4453 4607 3.118555 CCCACCATTTGCATGATGTTGAT 60.119 43.478 8.94 0.00 31.07 2.57
4454 4608 4.509616 CCACCATTTGCATGATGTTGATT 58.490 39.130 8.94 0.00 31.07 2.57
4455 4609 4.331443 CCACCATTTGCATGATGTTGATTG 59.669 41.667 8.94 0.00 31.07 2.67
4456 4610 4.331443 CACCATTTGCATGATGTTGATTGG 59.669 41.667 0.00 0.00 31.07 3.16
4457 4611 4.020039 ACCATTTGCATGATGTTGATTGGT 60.020 37.500 0.00 0.00 31.07 3.67
4458 4612 4.331443 CCATTTGCATGATGTTGATTGGTG 59.669 41.667 0.00 0.00 31.07 4.17
4459 4613 4.603989 TTTGCATGATGTTGATTGGTGT 57.396 36.364 0.00 0.00 0.00 4.16
4460 4614 3.579335 TGCATGATGTTGATTGGTGTG 57.421 42.857 0.00 0.00 0.00 3.82
4461 4615 2.231721 TGCATGATGTTGATTGGTGTGG 59.768 45.455 0.00 0.00 0.00 4.17
4462 4616 2.417651 GCATGATGTTGATTGGTGTGGG 60.418 50.000 0.00 0.00 0.00 4.61
4463 4617 2.967745 TGATGTTGATTGGTGTGGGA 57.032 45.000 0.00 0.00 0.00 4.37
4464 4618 3.235750 TGATGTTGATTGGTGTGGGAA 57.764 42.857 0.00 0.00 0.00 3.97
4465 4619 3.156293 TGATGTTGATTGGTGTGGGAAG 58.844 45.455 0.00 0.00 0.00 3.46
4466 4620 1.993956 TGTTGATTGGTGTGGGAAGG 58.006 50.000 0.00 0.00 0.00 3.46
4467 4621 1.216678 TGTTGATTGGTGTGGGAAGGT 59.783 47.619 0.00 0.00 0.00 3.50
4468 4622 1.613437 GTTGATTGGTGTGGGAAGGTG 59.387 52.381 0.00 0.00 0.00 4.00
4469 4623 0.850100 TGATTGGTGTGGGAAGGTGT 59.150 50.000 0.00 0.00 0.00 4.16
4470 4624 1.247567 GATTGGTGTGGGAAGGTGTG 58.752 55.000 0.00 0.00 0.00 3.82
4471 4625 0.555769 ATTGGTGTGGGAAGGTGTGT 59.444 50.000 0.00 0.00 0.00 3.72
4472 4626 0.106918 TTGGTGTGGGAAGGTGTGTC 60.107 55.000 0.00 0.00 0.00 3.67
4473 4627 1.275421 TGGTGTGGGAAGGTGTGTCA 61.275 55.000 0.00 0.00 0.00 3.58
4474 4628 0.535102 GGTGTGGGAAGGTGTGTCAG 60.535 60.000 0.00 0.00 0.00 3.51
4475 4629 0.535102 GTGTGGGAAGGTGTGTCAGG 60.535 60.000 0.00 0.00 0.00 3.86
4476 4630 0.986019 TGTGGGAAGGTGTGTCAGGT 60.986 55.000 0.00 0.00 0.00 4.00
4477 4631 0.535102 GTGGGAAGGTGTGTCAGGTG 60.535 60.000 0.00 0.00 0.00 4.00
4478 4632 0.692756 TGGGAAGGTGTGTCAGGTGA 60.693 55.000 0.00 0.00 0.00 4.02
4479 4633 0.250338 GGGAAGGTGTGTCAGGTGAC 60.250 60.000 2.99 2.99 44.97 3.67
4480 4634 0.759346 GGAAGGTGTGTCAGGTGACT 59.241 55.000 11.31 0.00 44.99 3.41
4481 4635 1.141053 GGAAGGTGTGTCAGGTGACTT 59.859 52.381 11.31 0.00 44.99 3.01
4482 4636 2.367567 GGAAGGTGTGTCAGGTGACTTA 59.632 50.000 11.31 0.00 44.99 2.24
4483 4637 3.008049 GGAAGGTGTGTCAGGTGACTTAT 59.992 47.826 11.31 0.00 44.99 1.73
4484 4638 4.222145 GGAAGGTGTGTCAGGTGACTTATA 59.778 45.833 11.31 0.00 44.99 0.98
4485 4639 5.279809 GGAAGGTGTGTCAGGTGACTTATAA 60.280 44.000 11.31 0.00 44.99 0.98
4486 4640 5.407407 AGGTGTGTCAGGTGACTTATAAG 57.593 43.478 11.05 11.05 44.99 1.73
4487 4641 4.838986 AGGTGTGTCAGGTGACTTATAAGT 59.161 41.667 18.05 18.05 44.99 2.24
4508 4662 1.358759 GGTGACAACCAAACAGGCG 59.641 57.895 0.00 0.00 46.75 5.52
4509 4663 1.381165 GGTGACAACCAAACAGGCGT 61.381 55.000 0.00 0.00 46.75 5.68
4510 4664 0.248458 GTGACAACCAAACAGGCGTG 60.248 55.000 4.53 4.53 43.14 5.34
4511 4665 0.393132 TGACAACCAAACAGGCGTGA 60.393 50.000 14.38 0.00 43.14 4.35
4512 4666 0.028902 GACAACCAAACAGGCGTGAC 59.971 55.000 14.38 0.00 43.14 3.67
4513 4667 0.393808 ACAACCAAACAGGCGTGACT 60.394 50.000 14.38 0.00 43.14 3.41
4514 4668 0.738389 CAACCAAACAGGCGTGACTT 59.262 50.000 14.38 3.10 43.14 3.01
4515 4669 1.944024 CAACCAAACAGGCGTGACTTA 59.056 47.619 14.38 0.00 43.14 2.24
4516 4670 2.552315 CAACCAAACAGGCGTGACTTAT 59.448 45.455 14.38 0.00 43.14 1.73
4517 4671 3.688694 ACCAAACAGGCGTGACTTATA 57.311 42.857 14.38 0.00 43.14 0.98
4518 4672 4.010667 ACCAAACAGGCGTGACTTATAA 57.989 40.909 14.38 0.00 43.14 0.98
4519 4673 4.000988 ACCAAACAGGCGTGACTTATAAG 58.999 43.478 14.38 11.05 43.14 1.73
4520 4674 4.000988 CCAAACAGGCGTGACTTATAAGT 58.999 43.478 18.05 18.05 43.16 2.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 6.564557 AAAAGGCCATTCACCATATTGAAT 57.435 33.333 5.01 0.00 45.32 2.57
25 26 6.371595 AAAAAGGCCATTCACCATATTGAA 57.628 33.333 5.01 0.00 39.79 2.69
68 72 2.617308 CTGACTAGATGGCAGCCAAATG 59.383 50.000 20.84 11.61 45.95 2.32
76 80 0.463204 GCTGAGCTGACTAGATGGCA 59.537 55.000 0.00 0.00 0.00 4.92
79 83 3.708890 CTGAAGCTGAGCTGACTAGATG 58.291 50.000 8.16 0.00 39.62 2.90
82 86 1.925229 GCTGAAGCTGAGCTGACTAG 58.075 55.000 8.16 5.45 39.62 2.57
98 102 2.501223 TTTCGTGACGGGGCTAGCTG 62.501 60.000 15.72 7.62 0.00 4.24
99 103 2.227089 CTTTCGTGACGGGGCTAGCT 62.227 60.000 15.72 0.00 0.00 3.32
113 117 0.943673 TGGACACACACATGCTTTCG 59.056 50.000 0.00 0.00 0.00 3.46
114 118 4.395854 TCATATGGACACACACATGCTTTC 59.604 41.667 2.13 0.00 0.00 2.62
115 119 4.334552 TCATATGGACACACACATGCTTT 58.665 39.130 2.13 0.00 0.00 3.51
116 120 3.954200 TCATATGGACACACACATGCTT 58.046 40.909 2.13 0.00 0.00 3.91
123 127 6.888105 ACATCACTATTCATATGGACACACA 58.112 36.000 2.13 0.00 0.00 3.72
124 128 7.600375 CCTACATCACTATTCATATGGACACAC 59.400 40.741 2.13 0.00 0.00 3.82
130 134 7.761704 GCTGTACCTACATCACTATTCATATGG 59.238 40.741 2.13 0.00 35.36 2.74
147 151 0.397535 CCCCTTACCGGCTGTACCTA 60.398 60.000 0.00 0.00 35.61 3.08
168 172 2.599082 CGACTCTCGCATGTTCCTTAAC 59.401 50.000 0.00 0.00 32.46 2.01
174 178 3.857665 TCATTAACGACTCTCGCATGTTC 59.142 43.478 0.00 0.00 45.12 3.18
180 184 4.629065 CTTGTTTCATTAACGACTCTCGC 58.371 43.478 0.00 0.00 45.12 5.03
186 190 5.041951 TGGATGCTTGTTTCATTAACGAC 57.958 39.130 0.00 0.00 39.72 4.34
187 191 5.457140 GTTGGATGCTTGTTTCATTAACGA 58.543 37.500 0.00 0.00 39.72 3.85
189 193 5.783111 AGGTTGGATGCTTGTTTCATTAAC 58.217 37.500 0.00 0.00 37.26 2.01
190 194 6.418057 AAGGTTGGATGCTTGTTTCATTAA 57.582 33.333 0.00 0.00 0.00 1.40
191 195 6.945435 TCTAAGGTTGGATGCTTGTTTCATTA 59.055 34.615 0.00 0.00 0.00 1.90
192 196 4.961438 AAGGTTGGATGCTTGTTTCATT 57.039 36.364 0.00 0.00 0.00 2.57
193 197 5.324409 TCTAAGGTTGGATGCTTGTTTCAT 58.676 37.500 0.00 0.00 0.00 2.57
194 198 4.724399 TCTAAGGTTGGATGCTTGTTTCA 58.276 39.130 0.00 0.00 0.00 2.69
195 199 5.904362 ATCTAAGGTTGGATGCTTGTTTC 57.096 39.130 0.00 0.00 0.00 2.78
199 203 7.630242 TTAGAAATCTAAGGTTGGATGCTTG 57.370 36.000 0.00 0.00 33.83 4.01
218 232 8.106462 TGATGATGGTGGAAATACAACTTAGAA 58.894 33.333 0.00 0.00 0.00 2.10
219 233 7.552687 GTGATGATGGTGGAAATACAACTTAGA 59.447 37.037 0.00 0.00 0.00 2.10
242 256 1.971481 AGCATGAAAGCTGTGTGTGA 58.029 45.000 0.00 0.00 44.66 3.58
247 261 6.089016 CACTATGAAAAAGCATGAAAGCTGTG 59.911 38.462 0.00 0.00 45.89 3.66
251 265 5.574443 GTCCACTATGAAAAAGCATGAAAGC 59.426 40.000 0.00 0.00 0.00 3.51
252 266 6.071728 AGGTCCACTATGAAAAAGCATGAAAG 60.072 38.462 0.00 0.00 0.00 2.62
257 271 4.922206 TGAGGTCCACTATGAAAAAGCAT 58.078 39.130 0.00 0.00 0.00 3.79
259 273 5.904362 ATTGAGGTCCACTATGAAAAAGC 57.096 39.130 0.00 0.00 0.00 3.51
265 279 8.044908 GGTTTAGTTAATTGAGGTCCACTATGA 58.955 37.037 0.00 0.00 0.00 2.15
278 292 6.339587 TCTTTGCCCTGGTTTAGTTAATTG 57.660 37.500 0.00 0.00 0.00 2.32
279 293 7.016170 ACAATCTTTGCCCTGGTTTAGTTAATT 59.984 33.333 0.00 0.00 0.00 1.40
282 296 5.390387 ACAATCTTTGCCCTGGTTTAGTTA 58.610 37.500 0.00 0.00 0.00 2.24
295 309 3.426695 CCAATCTCCACGACAATCTTTGC 60.427 47.826 0.00 0.00 0.00 3.68
305 319 0.036388 GGTCTTGCCAATCTCCACGA 60.036 55.000 0.00 0.00 37.17 4.35
330 344 1.468520 ACCATTTCGTCGCCAAGAATG 59.531 47.619 0.00 0.00 0.00 2.67
361 375 6.481313 ACCTGATCATAAATGAGTGATGTTCG 59.519 38.462 0.00 0.00 40.64 3.95
362 376 7.798596 ACCTGATCATAAATGAGTGATGTTC 57.201 36.000 0.00 0.00 40.64 3.18
367 381 6.156775 TCTCCAACCTGATCATAAATGAGTGA 59.843 38.462 0.00 0.00 40.64 3.41
370 384 7.013083 CCTTTCTCCAACCTGATCATAAATGAG 59.987 40.741 0.00 0.73 40.64 2.90
374 388 6.139679 ACCTTTCTCCAACCTGATCATAAA 57.860 37.500 0.00 0.00 0.00 1.40
385 399 1.001633 TCGTGCCTACCTTTCTCCAAC 59.998 52.381 0.00 0.00 0.00 3.77
397 411 2.011741 ATTGCGGATCGTCGTGCCTA 62.012 55.000 0.00 0.00 0.00 3.93
402 416 2.816689 TGATTTATTGCGGATCGTCGT 58.183 42.857 0.00 0.00 0.00 4.34
403 417 3.489416 TCTTGATTTATTGCGGATCGTCG 59.511 43.478 0.00 0.00 0.00 5.12
407 421 7.322222 CGATTTCTTCTTGATTTATTGCGGATC 59.678 37.037 0.00 0.00 0.00 3.36
409 423 6.458206 CCGATTTCTTCTTGATTTATTGCGGA 60.458 38.462 0.00 0.00 33.89 5.54
412 426 5.979517 CCCCGATTTCTTCTTGATTTATTGC 59.020 40.000 0.00 0.00 0.00 3.56
413 427 6.096846 ACCCCCGATTTCTTCTTGATTTATTG 59.903 38.462 0.00 0.00 0.00 1.90
414 428 6.194967 ACCCCCGATTTCTTCTTGATTTATT 58.805 36.000 0.00 0.00 0.00 1.40
431 445 1.120530 GCTTCTCTTATGACCCCCGA 58.879 55.000 0.00 0.00 0.00 5.14
438 452 3.703556 CACCCTCTGAGCTTCTCTTATGA 59.296 47.826 0.00 0.00 0.00 2.15
440 454 3.960102 CTCACCCTCTGAGCTTCTCTTAT 59.040 47.826 0.00 0.00 40.23 1.73
454 468 2.657143 ACCGTCTAGAATCTCACCCTC 58.343 52.381 0.00 0.00 0.00 4.30
484 498 6.330778 AGTTCCATTATATACCCTTTTCCGGA 59.669 38.462 0.00 0.00 0.00 5.14
485 499 6.430000 CAGTTCCATTATATACCCTTTTCCGG 59.570 42.308 0.00 0.00 0.00 5.14
488 502 7.817418 TGCAGTTCCATTATATACCCTTTTC 57.183 36.000 0.00 0.00 0.00 2.29
493 507 5.105756 GGCATTGCAGTTCCATTATATACCC 60.106 44.000 11.39 0.00 0.00 3.69
498 512 4.099266 GGTTGGCATTGCAGTTCCATTATA 59.901 41.667 11.39 0.00 0.00 0.98
508 522 1.000385 TCTTTTCGGTTGGCATTGCAG 60.000 47.619 11.39 0.00 0.00 4.41
519 533 1.658994 TTGACGCAACTCTTTTCGGT 58.341 45.000 0.00 0.00 0.00 4.69
533 547 8.960075 ACTGGAAAAACGTTTTATATTTTGACG 58.040 29.630 25.44 9.13 39.43 4.35
555 581 3.160679 ACCTCCCTCAATTTGAACTGG 57.839 47.619 0.01 2.31 0.00 4.00
570 597 7.293018 CGTAAACATTGTTTTGTACTACCTCC 58.707 38.462 19.15 0.00 0.00 4.30
605 632 0.309612 AACAAACACGATCCAACGGC 59.690 50.000 0.00 0.00 37.61 5.68
633 664 0.908198 AAGTCCCATGGAGAGCAGAC 59.092 55.000 15.22 10.90 29.39 3.51
695 726 3.370104 TGTTTGTTTGGATTGGACTGGT 58.630 40.909 0.00 0.00 0.00 4.00
723 754 6.842163 ACCGAAAATATCTGTGCTAAGTTTG 58.158 36.000 0.00 0.00 0.00 2.93
728 759 3.554324 GCGACCGAAAATATCTGTGCTAA 59.446 43.478 0.00 0.00 0.00 3.09
735 766 4.634004 TCATGTTTGCGACCGAAAATATCT 59.366 37.500 2.70 0.00 0.00 1.98
783 814 2.040012 GGATGCTCCTCCATCATCATGT 59.960 50.000 4.75 0.00 42.63 3.21
801 832 1.001020 TGCTGCCGTTTGGATGGAT 60.001 52.632 0.00 0.00 37.49 3.41
950 1006 2.482142 GGAGAGCGGATACTGTTTGGAG 60.482 54.545 0.00 0.00 0.00 3.86
1258 1351 1.066303 CTGCTTAGAGTAGAGGGCGTG 59.934 57.143 0.00 0.00 28.61 5.34
1259 1352 1.394618 CTGCTTAGAGTAGAGGGCGT 58.605 55.000 0.00 0.00 28.61 5.68
1261 1354 0.391228 GGCTGCTTAGAGTAGAGGGC 59.609 60.000 0.00 0.00 28.61 5.19
1272 1370 1.550524 ACAGAGATCGTTGGCTGCTTA 59.449 47.619 0.00 0.00 31.74 3.09
1283 1381 2.475353 CGTGACAGACAGACAGAGATCG 60.475 54.545 0.00 0.00 0.00 3.69
1284 1382 2.486203 ACGTGACAGACAGACAGAGATC 59.514 50.000 0.00 0.00 0.00 2.75
1312 1418 1.880675 GACTCGGAGTGTCTGTCAAGA 59.119 52.381 16.72 0.00 46.18 3.02
1329 1436 6.436843 AAAAAGAAAACATCACGTGAGACT 57.563 33.333 24.41 12.52 0.00 3.24
1355 1462 1.341531 CCACAACCTGAGACGAGAAGT 59.658 52.381 0.00 0.00 0.00 3.01
1365 1472 2.425592 CTGCCGTCCACAACCTGA 59.574 61.111 0.00 0.00 0.00 3.86
1366 1473 3.357079 GCTGCCGTCCACAACCTG 61.357 66.667 0.00 0.00 0.00 4.00
1374 1481 2.202932 ATCACATCGCTGCCGTCC 60.203 61.111 0.00 0.00 35.54 4.79
1426 1533 3.570125 GGGGGCTGAAAATAATACTGAGC 59.430 47.826 0.00 0.00 0.00 4.26
1449 1556 3.916172 CAGTGTTTGATTGATTGCCTTCG 59.084 43.478 0.00 0.00 0.00 3.79
1465 1572 0.396435 TTGCGAGACCCATCAGTGTT 59.604 50.000 0.00 0.00 0.00 3.32
1466 1573 0.396435 TTTGCGAGACCCATCAGTGT 59.604 50.000 0.00 0.00 0.00 3.55
1467 1574 0.798776 GTTTGCGAGACCCATCAGTG 59.201 55.000 0.00 0.00 0.00 3.66
1468 1575 0.670546 CGTTTGCGAGACCCATCAGT 60.671 55.000 0.00 0.00 41.33 3.41
1496 1603 8.011844 TCAGTGACTATGCAATTACTATGTCT 57.988 34.615 0.00 0.00 0.00 3.41
1506 1613 5.909621 ATTGCTTTCAGTGACTATGCAAT 57.090 34.783 18.34 18.34 42.42 3.56
1535 1642 2.544685 CGAATCGTTGAATCTGAGGCT 58.455 47.619 0.00 0.00 0.00 4.58
1546 1653 2.415697 AACAAAAGCCCGAATCGTTG 57.584 45.000 0.82 1.60 0.00 4.10
1699 1822 4.080863 CCTAGTAAACCCTGAATGCAGACT 60.081 45.833 0.74 0.00 45.17 3.24
1700 1823 4.192317 CCTAGTAAACCCTGAATGCAGAC 58.808 47.826 0.74 0.00 45.17 3.51
1701 1824 3.370527 GCCTAGTAAACCCTGAATGCAGA 60.371 47.826 0.74 0.00 45.17 4.26
1702 1825 2.945668 GCCTAGTAAACCCTGAATGCAG 59.054 50.000 0.00 0.00 41.93 4.41
1720 1843 0.328258 ATCACCGGTTAAGCAAGCCT 59.672 50.000 2.97 0.00 0.00 4.58
1721 1844 1.132453 GAATCACCGGTTAAGCAAGCC 59.868 52.381 2.97 0.00 0.00 4.35
1726 1849 1.339727 ACCCTGAATCACCGGTTAAGC 60.340 52.381 2.97 0.00 0.00 3.09
1733 1861 3.198068 CAGTGAATACCCTGAATCACCG 58.802 50.000 0.00 0.00 42.39 4.94
1771 1899 6.000219 GGCTTCTTCTCTATTGGAATATGCA 59.000 40.000 0.00 0.00 0.00 3.96
1772 1900 5.121454 CGGCTTCTTCTCTATTGGAATATGC 59.879 44.000 0.00 0.00 0.00 3.14
1773 1901 6.367422 GTCGGCTTCTTCTCTATTGGAATATG 59.633 42.308 0.00 0.00 0.00 1.78
1784 1912 1.134848 GCATCAGTCGGCTTCTTCTCT 60.135 52.381 0.00 0.00 0.00 3.10
1814 1942 3.838565 TGTCCAGCTCAACCCATAAAAA 58.161 40.909 0.00 0.00 0.00 1.94
1816 1944 3.010027 TCATGTCCAGCTCAACCCATAAA 59.990 43.478 0.00 0.00 0.00 1.40
1817 1945 2.575735 TCATGTCCAGCTCAACCCATAA 59.424 45.455 0.00 0.00 0.00 1.90
1964 2092 7.686434 AGGATCAGCTTGGTAAGTTTTACTTA 58.314 34.615 0.00 0.00 39.51 2.24
1970 2098 3.330701 TGGAGGATCAGCTTGGTAAGTTT 59.669 43.478 0.00 0.00 36.25 2.66
1983 2111 6.878923 CCGCAAACTATATAAATGGAGGATCA 59.121 38.462 0.00 0.00 36.25 2.92
1987 2115 5.122396 GCTCCGCAAACTATATAAATGGAGG 59.878 44.000 6.57 2.18 40.58 4.30
2001 2129 5.931441 AATCTATTGATAGCTCCGCAAAC 57.069 39.130 0.00 0.00 31.70 2.93
2017 2145 9.975218 ATGGTAAGGTGAACTTTACAAATCTAT 57.025 29.630 14.91 0.91 39.34 1.98
2056 2184 5.059404 TCTGGTAGCTGCTTTTATTTTGC 57.941 39.130 7.79 0.00 0.00 3.68
2108 2236 3.756434 GCATGGCTCAACTTTGGTACTTA 59.244 43.478 0.00 0.00 0.00 2.24
2134 2262 7.283354 GCAGTCTTATTCTTAGGTAGGCAAAAT 59.717 37.037 0.00 0.00 0.00 1.82
2144 2272 5.734720 TCAAGTGGCAGTCTTATTCTTAGG 58.265 41.667 0.00 0.00 0.00 2.69
2222 2350 3.184628 TGACCAGACCAATCCTGAGATT 58.815 45.455 0.00 0.00 43.74 2.40
2226 2354 0.615331 GCTGACCAGACCAATCCTGA 59.385 55.000 0.47 0.00 33.65 3.86
2382 2510 9.561069 GGTCAACTGATAGGTTCACAATATTAT 57.439 33.333 0.00 0.00 0.00 1.28
2383 2511 8.544622 TGGTCAACTGATAGGTTCACAATATTA 58.455 33.333 0.00 0.00 0.00 0.98
2384 2512 7.402054 TGGTCAACTGATAGGTTCACAATATT 58.598 34.615 0.00 0.00 0.00 1.28
2395 2523 5.122869 CACACAATTCTGGTCAACTGATAGG 59.877 44.000 0.00 0.00 0.00 2.57
2409 2537 2.915604 AGGGAGATCACCACACAATTCT 59.084 45.455 11.56 0.00 0.00 2.40
2507 2635 7.938140 AAAATCCTCGACATTTCAATTAGGA 57.062 32.000 0.00 0.00 36.18 2.94
2533 2661 9.296400 CAGACCGACTTTTGAAGATTTTAAAAA 57.704 29.630 4.44 0.00 0.00 1.94
2551 2679 5.741388 ATGAATCAATAAAGCAGACCGAC 57.259 39.130 0.00 0.00 0.00 4.79
2552 2680 8.450578 AATAATGAATCAATAAAGCAGACCGA 57.549 30.769 0.00 0.00 0.00 4.69
2628 2756 5.475564 GGTAGTCATTTTACTGGGAAAAGCA 59.524 40.000 0.00 0.00 32.06 3.91
2630 2758 7.703058 ATGGTAGTCATTTTACTGGGAAAAG 57.297 36.000 0.00 0.00 32.06 2.27
2635 2763 6.094048 CACAGAATGGTAGTCATTTTACTGGG 59.906 42.308 0.00 0.00 45.36 4.45
2681 2809 3.964031 ACCAGGCAACAAAATTTCTACCA 59.036 39.130 0.00 0.00 41.41 3.25
2682 2810 4.306600 CACCAGGCAACAAAATTTCTACC 58.693 43.478 0.00 0.00 41.41 3.18
2699 2827 5.652014 TGCCTTCATTTAGTAATTCCACCAG 59.348 40.000 0.00 0.00 0.00 4.00
2718 2846 4.878397 GCATGTTTCTAGTGATACTGCCTT 59.122 41.667 0.00 0.00 30.57 4.35
2722 2850 6.932356 AATGGCATGTTTCTAGTGATACTG 57.068 37.500 0.00 0.00 0.00 2.74
2723 2851 7.944729 AAAATGGCATGTTTCTAGTGATACT 57.055 32.000 0.00 0.00 0.00 2.12
2737 2865 6.971527 AACATATGTGTGAAAAATGGCATG 57.028 33.333 9.63 0.00 38.92 4.06
2783 2911 3.766591 CTCTCCCAGACACATCACTAAGT 59.233 47.826 0.00 0.00 0.00 2.24
2808 2936 4.621747 CGGTTTTCATCCTTCTCAGTAGCT 60.622 45.833 0.00 0.00 0.00 3.32
2814 2942 3.181459 TGACACGGTTTTCATCCTTCTCA 60.181 43.478 0.00 0.00 0.00 3.27
2820 2948 3.049912 GCTTTTGACACGGTTTTCATCC 58.950 45.455 0.00 0.00 0.00 3.51
2936 3064 6.173339 CCTACTCTTGACATTGCTTCCTTAA 58.827 40.000 0.00 0.00 0.00 1.85
2950 3078 0.830648 CAATCCCGGCCTACTCTTGA 59.169 55.000 0.00 0.00 0.00 3.02
2964 3092 5.045872 GCATGTTAATTCTTGAGCCAATCC 58.954 41.667 0.00 0.00 0.00 3.01
3148 3276 4.022849 GCAAGATAATGCCCAATGGACTAC 60.023 45.833 0.00 0.00 40.49 2.73
3155 3283 8.426569 AATAACTATGCAAGATAATGCCCAAT 57.573 30.769 0.00 0.00 45.83 3.16
3160 3288 9.552114 CAGCTTAATAACTATGCAAGATAATGC 57.448 33.333 0.00 0.00 46.58 3.56
3188 3316 4.006989 TGCGCAAAGGAACTATACACATT 58.993 39.130 8.16 0.00 38.49 2.71
3194 3322 7.744087 AATCATAATGCGCAAAGGAACTATA 57.256 32.000 17.11 0.00 38.49 1.31
3208 3336 9.865321 ATGGTAGAATGCAATTAATCATAATGC 57.135 29.630 0.00 2.70 36.07 3.56
3288 3424 9.454859 AAAGAGGTAATGAGAAAATGTAGAAGG 57.545 33.333 0.00 0.00 0.00 3.46
3382 3518 1.633915 CCTGATCCTTCAGCTGCCCT 61.634 60.000 9.47 0.00 46.76 5.19
3539 3675 7.374975 AGCAAACCTAATACTGGCTAATAGA 57.625 36.000 0.00 0.00 0.00 1.98
3542 3678 6.895782 TGTAGCAAACCTAATACTGGCTAAT 58.104 36.000 0.00 0.00 34.55 1.73
3543 3679 6.302535 TGTAGCAAACCTAATACTGGCTAA 57.697 37.500 0.00 0.00 34.55 3.09
3550 3686 7.083875 TGCAGAATTGTAGCAAACCTAATAC 57.916 36.000 0.00 0.00 34.97 1.89
3552 3688 6.588719 TTGCAGAATTGTAGCAAACCTAAT 57.411 33.333 9.05 0.00 44.39 1.73
3571 3707 7.643569 ATCATGTCTACACCATTTTATTGCA 57.356 32.000 0.00 0.00 0.00 4.08
3608 3744 8.964476 AGAACTTGTTTTGAGTCTGAGATTTA 57.036 30.769 0.00 0.00 0.00 1.40
3609 3745 7.554118 TGAGAACTTGTTTTGAGTCTGAGATTT 59.446 33.333 0.00 0.00 0.00 2.17
3622 3758 8.819974 CAGCAAAATATGTTGAGAACTTGTTTT 58.180 29.630 9.96 0.00 42.37 2.43
3628 3764 6.006449 AGACCAGCAAAATATGTTGAGAACT 58.994 36.000 9.96 0.00 42.37 3.01
3635 3771 6.258727 CACTCGATAGACCAGCAAAATATGTT 59.741 38.462 0.00 0.00 42.67 2.71
3645 3781 2.099921 ACACATCACTCGATAGACCAGC 59.900 50.000 0.00 0.00 42.67 4.85
3654 3790 4.513198 TGTAACATCACACATCACTCGA 57.487 40.909 0.00 0.00 0.00 4.04
3656 3792 8.801715 AATTTTTGTAACATCACACATCACTC 57.198 30.769 0.00 0.00 0.00 3.51
3657 3793 9.033481 CAAATTTTTGTAACATCACACATCACT 57.967 29.630 0.00 0.00 33.59 3.41
3658 3794 8.274939 CCAAATTTTTGTAACATCACACATCAC 58.725 33.333 2.63 0.00 36.45 3.06
3659 3795 7.042187 GCCAAATTTTTGTAACATCACACATCA 60.042 33.333 2.63 0.00 36.45 3.07
3660 3796 7.042187 TGCCAAATTTTTGTAACATCACACATC 60.042 33.333 2.63 0.00 36.45 3.06
3661 3797 6.765036 TGCCAAATTTTTGTAACATCACACAT 59.235 30.769 2.63 0.00 36.45 3.21
3680 3816 3.577848 AGCACAGGTTAATTCATGCCAAA 59.422 39.130 0.00 0.00 33.50 3.28
3689 3825 5.394443 CCATGTATGCAAGCACAGGTTAATT 60.394 40.000 0.00 0.00 0.00 1.40
3711 3847 2.500098 GTTGGATGAGCACTAGGTACCA 59.500 50.000 15.94 0.00 0.00 3.25
3712 3848 2.500098 TGTTGGATGAGCACTAGGTACC 59.500 50.000 2.73 2.73 0.00 3.34
3714 3850 4.469586 TGAATGTTGGATGAGCACTAGGTA 59.530 41.667 0.00 0.00 0.00 3.08
3716 3852 3.877559 TGAATGTTGGATGAGCACTAGG 58.122 45.455 0.00 0.00 0.00 3.02
3718 3854 4.937620 GTCTTGAATGTTGGATGAGCACTA 59.062 41.667 0.00 0.00 0.00 2.74
3720 3856 3.503363 TGTCTTGAATGTTGGATGAGCAC 59.497 43.478 0.00 0.00 0.00 4.40
3721 3857 3.753815 TGTCTTGAATGTTGGATGAGCA 58.246 40.909 0.00 0.00 0.00 4.26
3722 3858 4.479619 GTTGTCTTGAATGTTGGATGAGC 58.520 43.478 0.00 0.00 0.00 4.26
3723 3859 4.763793 AGGTTGTCTTGAATGTTGGATGAG 59.236 41.667 0.00 0.00 0.00 2.90
3724 3860 4.728772 AGGTTGTCTTGAATGTTGGATGA 58.271 39.130 0.00 0.00 0.00 2.92
3725 3861 4.520111 TGAGGTTGTCTTGAATGTTGGATG 59.480 41.667 0.00 0.00 0.00 3.51
3726 3862 4.728772 TGAGGTTGTCTTGAATGTTGGAT 58.271 39.130 0.00 0.00 0.00 3.41
3727 3863 4.163441 TGAGGTTGTCTTGAATGTTGGA 57.837 40.909 0.00 0.00 0.00 3.53
3728 3864 4.916983 TTGAGGTTGTCTTGAATGTTGG 57.083 40.909 0.00 0.00 0.00 3.77
3730 3866 6.096705 TGTGATTTGAGGTTGTCTTGAATGTT 59.903 34.615 0.00 0.00 0.00 2.71
3731 3867 5.593909 TGTGATTTGAGGTTGTCTTGAATGT 59.406 36.000 0.00 0.00 0.00 2.71
3732 3868 6.075762 TGTGATTTGAGGTTGTCTTGAATG 57.924 37.500 0.00 0.00 0.00 2.67
3734 3870 5.827267 TGATGTGATTTGAGGTTGTCTTGAA 59.173 36.000 0.00 0.00 0.00 2.69
3745 3882 7.633621 ACATACGCTAAATGATGTGATTTGAG 58.366 34.615 0.00 0.00 31.41 3.02
3762 3899 4.122776 GGATGACTGATTGAACATACGCT 58.877 43.478 0.00 0.00 0.00 5.07
3763 3900 3.871006 TGGATGACTGATTGAACATACGC 59.129 43.478 0.00 0.00 0.00 4.42
3764 3901 6.609237 AATGGATGACTGATTGAACATACG 57.391 37.500 0.00 0.00 0.00 3.06
3771 3908 8.756486 ACAATATCAAATGGATGACTGATTGA 57.244 30.769 11.94 0.00 36.72 2.57
3777 3914 8.708378 TGTAGAGACAATATCAAATGGATGACT 58.292 33.333 0.00 0.00 33.06 3.41
3818 3955 5.612725 ACTTTGTTCATGAAATTGTGGGT 57.387 34.783 10.35 0.80 0.00 4.51
3829 3966 6.757947 AGATTGTTGTGGAAACTTTGTTCATG 59.242 34.615 0.00 0.00 0.00 3.07
3879 4031 9.595823 GGCTTTTAAGTTCTCTGTGTGTATATA 57.404 33.333 0.00 0.00 0.00 0.86
3884 4036 4.781934 AGGCTTTTAAGTTCTCTGTGTGT 58.218 39.130 0.00 0.00 0.00 3.72
3885 4037 5.296780 TCAAGGCTTTTAAGTTCTCTGTGTG 59.703 40.000 0.00 0.00 0.00 3.82
3900 4052 7.761249 GTGATATTTTGTGCTATTCAAGGCTTT 59.239 33.333 0.00 0.00 0.00 3.51
3911 4063 7.643371 CGCAATTACATGTGATATTTTGTGCTA 59.357 33.333 9.11 0.00 32.55 3.49
3917 4069 9.022915 CATTCACGCAATTACATGTGATATTTT 57.977 29.630 9.11 0.00 40.67 1.82
3922 4075 4.353737 GCATTCACGCAATTACATGTGAT 58.646 39.130 9.11 2.17 40.67 3.06
3938 4091 2.027285 TCCTGAAGATCGTTGGCATTCA 60.027 45.455 0.00 0.00 0.00 2.57
3943 4096 1.646189 GTCTCCTGAAGATCGTTGGC 58.354 55.000 0.00 0.00 36.11 4.52
3947 4100 3.261897 ACAAATGGTCTCCTGAAGATCGT 59.738 43.478 0.00 0.00 38.02 3.73
3995 4148 2.435437 TCTTGCTGATATACCTGCTGCA 59.565 45.455 0.88 0.88 35.22 4.41
4013 4166 3.113824 AGAACCTGATCCTCTGCATCTT 58.886 45.455 0.00 0.00 0.00 2.40
4085 4238 5.874810 CGAGGTTGAGATTCCAGATTTTGTA 59.125 40.000 0.00 0.00 0.00 2.41
4194 4348 8.142551 CCCACCTTTCAGTATATACTAACTCAC 58.857 40.741 15.03 0.00 34.13 3.51
4207 4361 1.136828 ACTGCACCCACCTTTCAGTA 58.863 50.000 0.00 0.00 36.37 2.74
4210 4364 1.110442 CAAACTGCACCCACCTTTCA 58.890 50.000 0.00 0.00 0.00 2.69
4223 4377 5.678807 TCACTCCTAGTGCAGCCAAACTG 62.679 52.174 2.12 0.00 45.54 3.16
4224 4378 1.059913 ACTCCTAGTGCAGCCAAACT 58.940 50.000 0.00 0.00 0.00 2.66
4225 4379 1.160137 CACTCCTAGTGCAGCCAAAC 58.840 55.000 0.00 0.00 39.62 2.93
4226 4380 1.055849 TCACTCCTAGTGCAGCCAAA 58.944 50.000 2.12 0.00 45.54 3.28
4227 4381 1.055849 TTCACTCCTAGTGCAGCCAA 58.944 50.000 2.12 0.00 45.54 4.52
4228 4382 0.321671 GTTCACTCCTAGTGCAGCCA 59.678 55.000 2.12 0.00 45.54 4.75
4229 4383 0.321671 TGTTCACTCCTAGTGCAGCC 59.678 55.000 2.12 0.00 45.54 4.85
4230 4384 1.001406 ACTGTTCACTCCTAGTGCAGC 59.999 52.381 12.00 0.00 45.54 5.25
4231 4385 2.560542 AGACTGTTCACTCCTAGTGCAG 59.439 50.000 11.02 11.02 45.54 4.41
4232 4386 2.598565 AGACTGTTCACTCCTAGTGCA 58.401 47.619 2.12 0.00 45.54 4.57
4233 4387 3.669251 AAGACTGTTCACTCCTAGTGC 57.331 47.619 2.12 0.00 45.54 4.40
4235 4389 6.980416 ACTAAAAGACTGTTCACTCCTAGT 57.020 37.500 0.00 0.00 0.00 2.57
4236 4390 7.596995 CAGAACTAAAAGACTGTTCACTCCTAG 59.403 40.741 0.00 0.00 41.56 3.02
4237 4391 7.287005 TCAGAACTAAAAGACTGTTCACTCCTA 59.713 37.037 0.00 0.00 41.56 2.94
4238 4392 6.098409 TCAGAACTAAAAGACTGTTCACTCCT 59.902 38.462 0.00 0.00 41.56 3.69
4239 4393 6.281405 TCAGAACTAAAAGACTGTTCACTCC 58.719 40.000 0.00 0.00 41.56 3.85
4240 4394 6.981559 ACTCAGAACTAAAAGACTGTTCACTC 59.018 38.462 0.00 0.00 41.56 3.51
4241 4395 6.879400 ACTCAGAACTAAAAGACTGTTCACT 58.121 36.000 0.00 0.00 41.56 3.41
4242 4396 8.644318 TTACTCAGAACTAAAAGACTGTTCAC 57.356 34.615 0.00 0.00 41.56 3.18
4243 4397 9.095065 GTTTACTCAGAACTAAAAGACTGTTCA 57.905 33.333 0.00 0.00 41.56 3.18
4244 4398 9.095065 TGTTTACTCAGAACTAAAAGACTGTTC 57.905 33.333 0.00 0.00 40.00 3.18
4245 4399 9.444600 TTGTTTACTCAGAACTAAAAGACTGTT 57.555 29.630 0.00 0.00 0.00 3.16
4246 4400 9.444600 TTTGTTTACTCAGAACTAAAAGACTGT 57.555 29.630 0.00 0.00 0.00 3.55
4247 4401 9.922305 CTTTGTTTACTCAGAACTAAAAGACTG 57.078 33.333 0.00 0.00 28.90 3.51
4248 4402 9.110502 CCTTTGTTTACTCAGAACTAAAAGACT 57.889 33.333 0.00 0.00 28.90 3.24
4249 4403 8.343366 CCCTTTGTTTACTCAGAACTAAAAGAC 58.657 37.037 0.00 0.00 28.90 3.01
4250 4404 7.012989 GCCCTTTGTTTACTCAGAACTAAAAGA 59.987 37.037 0.00 0.00 28.90 2.52
4251 4405 7.139392 GCCCTTTGTTTACTCAGAACTAAAAG 58.861 38.462 0.00 0.00 0.00 2.27
4252 4406 6.238538 CGCCCTTTGTTTACTCAGAACTAAAA 60.239 38.462 0.00 0.00 0.00 1.52
4253 4407 5.237779 CGCCCTTTGTTTACTCAGAACTAAA 59.762 40.000 0.00 0.00 0.00 1.85
4254 4408 4.753107 CGCCCTTTGTTTACTCAGAACTAA 59.247 41.667 0.00 0.00 0.00 2.24
4255 4409 4.202284 ACGCCCTTTGTTTACTCAGAACTA 60.202 41.667 0.00 0.00 0.00 2.24
4256 4410 3.139077 CGCCCTTTGTTTACTCAGAACT 58.861 45.455 0.00 0.00 0.00 3.01
4257 4411 2.876550 ACGCCCTTTGTTTACTCAGAAC 59.123 45.455 0.00 0.00 0.00 3.01
4258 4412 2.875933 CACGCCCTTTGTTTACTCAGAA 59.124 45.455 0.00 0.00 0.00 3.02
4259 4413 2.158871 ACACGCCCTTTGTTTACTCAGA 60.159 45.455 0.00 0.00 0.00 3.27
4260 4414 2.218603 ACACGCCCTTTGTTTACTCAG 58.781 47.619 0.00 0.00 0.00 3.35
4261 4415 2.335316 ACACGCCCTTTGTTTACTCA 57.665 45.000 0.00 0.00 0.00 3.41
4262 4416 3.368495 CAAACACGCCCTTTGTTTACTC 58.632 45.455 1.32 0.00 43.71 2.59
4263 4417 2.100087 CCAAACACGCCCTTTGTTTACT 59.900 45.455 1.32 0.00 43.71 2.24
4264 4418 2.159212 ACCAAACACGCCCTTTGTTTAC 60.159 45.455 1.32 0.00 43.71 2.01
4265 4419 2.100989 ACCAAACACGCCCTTTGTTTA 58.899 42.857 1.32 0.00 43.71 2.01
4266 4420 0.899019 ACCAAACACGCCCTTTGTTT 59.101 45.000 0.00 0.00 45.90 2.83
4267 4421 0.899019 AACCAAACACGCCCTTTGTT 59.101 45.000 0.00 0.00 38.88 2.83
4268 4422 0.458260 GAACCAAACACGCCCTTTGT 59.542 50.000 0.00 0.00 0.00 2.83
4269 4423 0.249280 GGAACCAAACACGCCCTTTG 60.249 55.000 0.00 0.00 0.00 2.77
4270 4424 1.730451 CGGAACCAAACACGCCCTTT 61.730 55.000 0.00 0.00 0.00 3.11
4271 4425 2.190841 CGGAACCAAACACGCCCTT 61.191 57.895 0.00 0.00 0.00 3.95
4272 4426 2.593436 CGGAACCAAACACGCCCT 60.593 61.111 0.00 0.00 0.00 5.19
4273 4427 1.520600 ATTCGGAACCAAACACGCCC 61.521 55.000 0.00 0.00 0.00 6.13
4274 4428 1.158434 TATTCGGAACCAAACACGCC 58.842 50.000 0.00 0.00 0.00 5.68
4275 4429 2.224784 ACTTATTCGGAACCAAACACGC 59.775 45.455 0.00 0.00 0.00 5.34
4276 4430 3.495377 TGACTTATTCGGAACCAAACACG 59.505 43.478 0.00 0.00 0.00 4.49
4277 4431 4.319984 GGTGACTTATTCGGAACCAAACAC 60.320 45.833 0.00 2.10 0.00 3.32
4278 4432 3.816523 GGTGACTTATTCGGAACCAAACA 59.183 43.478 0.00 0.00 0.00 2.83
4279 4433 3.816523 TGGTGACTTATTCGGAACCAAAC 59.183 43.478 0.00 0.00 34.85 2.93
4280 4434 4.088056 TGGTGACTTATTCGGAACCAAA 57.912 40.909 0.00 0.00 34.85 3.28
4281 4435 3.773418 TGGTGACTTATTCGGAACCAA 57.227 42.857 0.00 0.00 34.85 3.67
4282 4436 3.071892 AGTTGGTGACTTATTCGGAACCA 59.928 43.478 0.00 0.00 33.92 3.67
4283 4437 3.671716 AGTTGGTGACTTATTCGGAACC 58.328 45.455 0.00 0.00 33.92 3.62
4322 4476 7.821846 TCTGTTTGGCAAAATAAGTCACTTTTT 59.178 29.630 15.29 0.00 0.00 1.94
4323 4477 7.277760 GTCTGTTTGGCAAAATAAGTCACTTTT 59.722 33.333 15.29 0.00 0.00 2.27
4324 4478 6.756542 GTCTGTTTGGCAAAATAAGTCACTTT 59.243 34.615 15.29 0.00 0.00 2.66
4325 4479 6.273071 GTCTGTTTGGCAAAATAAGTCACTT 58.727 36.000 15.29 0.00 0.00 3.16
4326 4480 5.221244 GGTCTGTTTGGCAAAATAAGTCACT 60.221 40.000 15.29 0.00 0.00 3.41
4327 4481 4.982295 GGTCTGTTTGGCAAAATAAGTCAC 59.018 41.667 15.29 7.77 0.00 3.67
4328 4482 4.038642 GGGTCTGTTTGGCAAAATAAGTCA 59.961 41.667 15.29 6.39 0.00 3.41
4329 4483 4.556233 GGGTCTGTTTGGCAAAATAAGTC 58.444 43.478 15.29 10.05 0.00 3.01
4330 4484 3.005367 CGGGTCTGTTTGGCAAAATAAGT 59.995 43.478 15.29 0.00 0.00 2.24
4331 4485 3.254657 TCGGGTCTGTTTGGCAAAATAAG 59.745 43.478 15.29 12.47 0.00 1.73
4332 4486 3.004944 GTCGGGTCTGTTTGGCAAAATAA 59.995 43.478 15.29 2.73 0.00 1.40
4333 4487 2.554893 GTCGGGTCTGTTTGGCAAAATA 59.445 45.455 15.29 6.13 0.00 1.40
4334 4488 1.339929 GTCGGGTCTGTTTGGCAAAAT 59.660 47.619 15.29 0.00 0.00 1.82
4335 4489 0.741915 GTCGGGTCTGTTTGGCAAAA 59.258 50.000 15.29 4.59 0.00 2.44
4336 4490 0.106918 AGTCGGGTCTGTTTGGCAAA 60.107 50.000 8.93 8.93 0.00 3.68
4337 4491 0.106918 AAGTCGGGTCTGTTTGGCAA 60.107 50.000 0.00 0.00 0.00 4.52
4338 4492 0.759959 TAAGTCGGGTCTGTTTGGCA 59.240 50.000 0.00 0.00 0.00 4.92
4339 4493 2.109425 ATAAGTCGGGTCTGTTTGGC 57.891 50.000 0.00 0.00 0.00 4.52
4340 4494 4.828829 ACTTATAAGTCGGGTCTGTTTGG 58.171 43.478 12.50 0.00 32.86 3.28
4356 4510 8.612486 TGACTTATAAGTTGGGGTGACTTATA 57.388 34.615 18.96 10.90 44.36 0.98
4357 4511 7.504926 TGACTTATAAGTTGGGGTGACTTAT 57.495 36.000 18.96 12.48 46.52 1.73
4358 4512 6.938698 TGACTTATAAGTTGGGGTGACTTA 57.061 37.500 18.96 0.00 42.07 2.24
4359 4513 5.836024 TGACTTATAAGTTGGGGTGACTT 57.164 39.130 18.96 0.00 39.88 3.01
4360 4514 7.504926 TTATGACTTATAAGTTGGGGTGACT 57.495 36.000 18.96 0.00 39.88 3.41
4361 4515 7.787725 CTTATGACTTATAAGTTGGGGTGAC 57.212 40.000 18.96 4.87 42.11 3.67
4372 4526 5.718801 TGGGGGCAACTTATGACTTATAA 57.281 39.130 0.00 0.00 37.17 0.98
4373 4527 5.192923 AGTTGGGGGCAACTTATGACTTATA 59.807 40.000 0.00 0.00 42.16 0.98
4374 4528 4.017499 AGTTGGGGGCAACTTATGACTTAT 60.017 41.667 0.00 0.00 42.16 1.73
4375 4529 3.332485 AGTTGGGGGCAACTTATGACTTA 59.668 43.478 0.00 0.00 42.16 2.24
4376 4530 2.110011 AGTTGGGGGCAACTTATGACTT 59.890 45.455 0.00 0.00 42.16 3.01
4377 4531 1.710809 AGTTGGGGGCAACTTATGACT 59.289 47.619 0.00 0.00 42.16 3.41
4378 4532 2.215942 AGTTGGGGGCAACTTATGAC 57.784 50.000 0.00 0.00 42.16 3.06
4384 4538 3.040655 AGTTTTAAGTTGGGGGCAACT 57.959 42.857 0.00 0.00 46.26 3.16
4385 4539 3.830744 AAGTTTTAAGTTGGGGGCAAC 57.169 42.857 0.00 0.00 35.43 4.17
4386 4540 6.783482 ACTTATAAGTTTTAAGTTGGGGGCAA 59.217 34.615 12.50 0.00 36.70 4.52
4387 4541 6.316513 ACTTATAAGTTTTAAGTTGGGGGCA 58.683 36.000 12.50 0.00 36.70 5.36
4388 4542 6.434965 TGACTTATAAGTTTTAAGTTGGGGGC 59.565 38.462 18.96 2.46 39.40 5.80
4389 4543 7.094075 GGTGACTTATAAGTTTTAAGTTGGGGG 60.094 40.741 18.96 0.00 39.40 5.40
4390 4544 7.094075 GGGTGACTTATAAGTTTTAAGTTGGGG 60.094 40.741 18.96 0.00 39.40 4.96
4391 4545 7.094075 GGGGTGACTTATAAGTTTTAAGTTGGG 60.094 40.741 18.96 0.00 39.40 4.12
4392 4546 7.668469 AGGGGTGACTTATAAGTTTTAAGTTGG 59.332 37.037 18.96 0.00 39.40 3.77
4393 4547 8.631480 AGGGGTGACTTATAAGTTTTAAGTTG 57.369 34.615 18.96 0.00 39.40 3.16
4394 4548 9.650714 AAAGGGGTGACTTATAAGTTTTAAGTT 57.349 29.630 18.96 7.30 39.40 2.66
4395 4549 9.650714 AAAAGGGGTGACTTATAAGTTTTAAGT 57.349 29.630 18.96 15.86 41.41 2.24
4398 4552 8.361889 GCAAAAAGGGGTGACTTATAAGTTTTA 58.638 33.333 18.96 6.80 39.88 1.52
4399 4553 7.214381 GCAAAAAGGGGTGACTTATAAGTTTT 58.786 34.615 18.96 11.32 39.88 2.43
4400 4554 6.516028 CGCAAAAAGGGGTGACTTATAAGTTT 60.516 38.462 18.96 5.93 39.88 2.66
4401 4555 5.048294 CGCAAAAAGGGGTGACTTATAAGTT 60.048 40.000 18.96 3.63 39.88 2.66
4402 4556 4.457949 CGCAAAAAGGGGTGACTTATAAGT 59.542 41.667 18.05 18.05 43.16 2.24
4403 4557 4.457949 ACGCAAAAAGGGGTGACTTATAAG 59.542 41.667 11.05 11.05 32.17 1.73
4404 4558 4.400120 ACGCAAAAAGGGGTGACTTATAA 58.600 39.130 0.00 0.00 32.17 0.98
4405 4559 4.023726 ACGCAAAAAGGGGTGACTTATA 57.976 40.909 0.00 0.00 32.17 0.98
4406 4560 2.871453 ACGCAAAAAGGGGTGACTTAT 58.129 42.857 0.00 0.00 32.17 1.73
4407 4561 2.351706 ACGCAAAAAGGGGTGACTTA 57.648 45.000 0.00 0.00 32.17 2.24
4408 4562 3.200918 ACGCAAAAAGGGGTGACTT 57.799 47.368 0.00 0.00 32.17 3.01
4413 4567 0.898326 GGATCCACGCAAAAAGGGGT 60.898 55.000 6.95 0.00 32.92 4.95
4414 4568 1.604147 GGGATCCACGCAAAAAGGGG 61.604 60.000 15.23 0.00 33.80 4.79
4415 4569 0.897863 TGGGATCCACGCAAAAAGGG 60.898 55.000 15.23 0.00 38.47 3.95
4416 4570 0.243636 GTGGGATCCACGCAAAAAGG 59.756 55.000 15.23 0.00 44.95 3.11
4417 4571 3.792716 GTGGGATCCACGCAAAAAG 57.207 52.632 15.23 0.00 44.95 2.27
4426 4580 1.006878 TCATGCAAATGGTGGGATCCA 59.993 47.619 15.23 0.00 42.01 3.41
4427 4581 1.779221 TCATGCAAATGGTGGGATCC 58.221 50.000 1.92 1.92 0.00 3.36
4428 4582 2.696707 ACATCATGCAAATGGTGGGATC 59.303 45.455 14.75 0.00 36.99 3.36
4429 4583 2.754465 ACATCATGCAAATGGTGGGAT 58.246 42.857 14.75 0.00 36.99 3.85
4430 4584 2.234168 CAACATCATGCAAATGGTGGGA 59.766 45.455 18.22 0.00 38.02 4.37
4431 4585 2.234168 TCAACATCATGCAAATGGTGGG 59.766 45.455 22.98 8.70 41.27 4.61
4432 4586 3.596310 TCAACATCATGCAAATGGTGG 57.404 42.857 22.98 10.34 41.27 4.61
4433 4587 4.331443 CCAATCAACATCATGCAAATGGTG 59.669 41.667 19.38 19.38 42.09 4.17
4434 4588 4.020039 ACCAATCAACATCATGCAAATGGT 60.020 37.500 14.75 7.18 32.86 3.55
4435 4589 4.331443 CACCAATCAACATCATGCAAATGG 59.669 41.667 14.75 1.16 0.00 3.16
4436 4590 4.932799 ACACCAATCAACATCATGCAAATG 59.067 37.500 10.10 10.10 0.00 2.32
4437 4591 4.932799 CACACCAATCAACATCATGCAAAT 59.067 37.500 0.00 0.00 0.00 2.32
4438 4592 4.308265 CACACCAATCAACATCATGCAAA 58.692 39.130 0.00 0.00 0.00 3.68
4439 4593 3.306156 CCACACCAATCAACATCATGCAA 60.306 43.478 0.00 0.00 0.00 4.08
4440 4594 2.231721 CCACACCAATCAACATCATGCA 59.768 45.455 0.00 0.00 0.00 3.96
4441 4595 2.417651 CCCACACCAATCAACATCATGC 60.418 50.000 0.00 0.00 0.00 4.06
4442 4596 3.090790 TCCCACACCAATCAACATCATG 58.909 45.455 0.00 0.00 0.00 3.07
4443 4597 3.454719 TCCCACACCAATCAACATCAT 57.545 42.857 0.00 0.00 0.00 2.45
4444 4598 2.967745 TCCCACACCAATCAACATCA 57.032 45.000 0.00 0.00 0.00 3.07
4445 4599 2.493278 CCTTCCCACACCAATCAACATC 59.507 50.000 0.00 0.00 0.00 3.06
4446 4600 2.158325 ACCTTCCCACACCAATCAACAT 60.158 45.455 0.00 0.00 0.00 2.71
4447 4601 1.216678 ACCTTCCCACACCAATCAACA 59.783 47.619 0.00 0.00 0.00 3.33
4448 4602 1.613437 CACCTTCCCACACCAATCAAC 59.387 52.381 0.00 0.00 0.00 3.18
4449 4603 1.216678 ACACCTTCCCACACCAATCAA 59.783 47.619 0.00 0.00 0.00 2.57
4450 4604 0.850100 ACACCTTCCCACACCAATCA 59.150 50.000 0.00 0.00 0.00 2.57
4451 4605 1.247567 CACACCTTCCCACACCAATC 58.752 55.000 0.00 0.00 0.00 2.67
4452 4606 0.555769 ACACACCTTCCCACACCAAT 59.444 50.000 0.00 0.00 0.00 3.16
4453 4607 0.106918 GACACACCTTCCCACACCAA 60.107 55.000 0.00 0.00 0.00 3.67
4454 4608 1.275421 TGACACACCTTCCCACACCA 61.275 55.000 0.00 0.00 0.00 4.17
4455 4609 0.535102 CTGACACACCTTCCCACACC 60.535 60.000 0.00 0.00 0.00 4.16
4456 4610 0.535102 CCTGACACACCTTCCCACAC 60.535 60.000 0.00 0.00 0.00 3.82
4457 4611 0.986019 ACCTGACACACCTTCCCACA 60.986 55.000 0.00 0.00 0.00 4.17
4458 4612 0.535102 CACCTGACACACCTTCCCAC 60.535 60.000 0.00 0.00 0.00 4.61
4459 4613 0.692756 TCACCTGACACACCTTCCCA 60.693 55.000 0.00 0.00 0.00 4.37
4460 4614 0.250338 GTCACCTGACACACCTTCCC 60.250 60.000 0.31 0.00 44.18 3.97
4461 4615 3.307379 GTCACCTGACACACCTTCC 57.693 57.895 0.31 0.00 44.18 3.46
4477 4631 5.790593 TGGTTGTCACCTGACTTATAAGTC 58.209 41.667 30.61 30.61 46.58 3.01
4478 4632 5.818678 TGGTTGTCACCTGACTTATAAGT 57.181 39.130 18.05 18.05 44.61 2.24
4479 4633 6.485313 TGTTTGGTTGTCACCTGACTTATAAG 59.515 38.462 11.05 11.05 44.61 1.73
4480 4634 6.358178 TGTTTGGTTGTCACCTGACTTATAA 58.642 36.000 6.97 0.00 44.61 0.98
4481 4635 5.931294 TGTTTGGTTGTCACCTGACTTATA 58.069 37.500 6.97 0.00 44.61 0.98
4482 4636 4.787551 TGTTTGGTTGTCACCTGACTTAT 58.212 39.130 6.97 0.00 44.61 1.73
4483 4637 4.196193 CTGTTTGGTTGTCACCTGACTTA 58.804 43.478 6.97 0.00 44.61 2.24
4484 4638 3.016736 CTGTTTGGTTGTCACCTGACTT 58.983 45.455 6.97 0.00 44.61 3.01
4485 4639 2.643551 CTGTTTGGTTGTCACCTGACT 58.356 47.619 6.97 0.00 44.61 3.41
4486 4640 1.676006 CCTGTTTGGTTGTCACCTGAC 59.324 52.381 0.00 0.00 44.61 3.51
4487 4641 2.021723 GCCTGTTTGGTTGTCACCTGA 61.022 52.381 0.00 0.00 44.61 3.86
4488 4642 0.385390 GCCTGTTTGGTTGTCACCTG 59.615 55.000 0.00 0.00 44.61 4.00
4489 4643 1.101049 CGCCTGTTTGGTTGTCACCT 61.101 55.000 0.00 0.00 44.61 4.00
4490 4644 1.358759 CGCCTGTTTGGTTGTCACC 59.641 57.895 0.00 0.00 44.56 4.02
4491 4645 0.248458 CACGCCTGTTTGGTTGTCAC 60.248 55.000 0.00 0.00 38.35 3.67
4492 4646 0.393132 TCACGCCTGTTTGGTTGTCA 60.393 50.000 0.00 0.00 38.35 3.58
4493 4647 0.028902 GTCACGCCTGTTTGGTTGTC 59.971 55.000 0.00 0.00 38.35 3.18
4494 4648 0.393808 AGTCACGCCTGTTTGGTTGT 60.394 50.000 0.00 0.00 38.35 3.32
4495 4649 0.738389 AAGTCACGCCTGTTTGGTTG 59.262 50.000 0.00 0.00 38.35 3.77
4496 4650 2.335316 TAAGTCACGCCTGTTTGGTT 57.665 45.000 0.00 0.00 38.35 3.67
4497 4651 2.561478 ATAAGTCACGCCTGTTTGGT 57.439 45.000 0.00 0.00 38.35 3.67
4498 4652 4.000988 ACTTATAAGTCACGCCTGTTTGG 58.999 43.478 12.50 0.00 32.86 3.28


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.