Multiple sequence alignment - TraesCS3B01G535900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G535900 chr3B 100.000 6214 0 0 968 7181 775825323 775831536 0.000000e+00 11476.0
1 TraesCS3B01G535900 chr3B 94.206 1329 76 1 3919 5246 276490908 276489580 0.000000e+00 2026.0
2 TraesCS3B01G535900 chr3B 100.000 617 0 0 1 617 775824356 775824972 0.000000e+00 1140.0
3 TraesCS3B01G535900 chr3B 92.444 675 48 3 4890 5562 367841029 367841702 0.000000e+00 961.0
4 TraesCS3B01G535900 chr3B 92.793 333 18 6 5226 5553 67929094 67929425 1.810000e-130 477.0
5 TraesCS3B01G535900 chr3B 97.942 243 3 1 3675 3915 775829662 775829904 3.100000e-113 420.0
6 TraesCS3B01G535900 chr3B 97.468 237 4 1 3681 3915 775828271 775828507 3.120000e-108 403.0
7 TraesCS3B01G535900 chr3B 96.296 243 7 1 3675 3915 67929179 67929421 1.450000e-106 398.0
8 TraesCS3B01G535900 chr3B 95.935 246 8 1 3672 3915 785671963 785671718 1.450000e-106 398.0
9 TraesCS3B01G535900 chr3B 92.105 152 11 1 6073 6224 775660898 775661048 5.640000e-51 213.0
10 TraesCS3B01G535900 chr3B 87.879 132 14 1 1370 1501 594457528 594457399 3.470000e-33 154.0
11 TraesCS3B01G535900 chr3B 87.121 132 15 1 1370 1501 422331799 422331670 1.610000e-31 148.0
12 TraesCS3B01G535900 chr3A 92.877 2485 133 19 1223 3674 716067317 716069790 0.000000e+00 3568.0
13 TraesCS3B01G535900 chr3A 84.789 1065 85 40 6009 7061 716070361 716071360 0.000000e+00 998.0
14 TraesCS3B01G535900 chr3A 85.735 701 74 16 2456 3145 128478011 128477326 0.000000e+00 717.0
15 TraesCS3B01G535900 chr3A 85.265 699 77 14 2456 3145 465662894 465662213 0.000000e+00 697.0
16 TraesCS3B01G535900 chr3A 94.713 435 21 1 5578 6010 716069802 716070236 0.000000e+00 675.0
17 TraesCS3B01G535900 chr3A 89.862 434 32 1 1 422 716043351 716043784 1.360000e-151 547.0
18 TraesCS3B01G535900 chr3A 88.347 369 34 6 1671 2035 644734160 644734523 1.110000e-117 435.0
19 TraesCS3B01G535900 chr3A 81.851 551 43 33 6637 7178 716070948 716071450 1.860000e-110 411.0
20 TraesCS3B01G535900 chr3A 94.388 196 10 1 968 1163 716067119 716067313 4.210000e-77 300.0
21 TraesCS3B01G535900 chr3A 89.474 152 9 2 6073 6224 715804799 715804943 1.230000e-42 185.0
22 TraesCS3B01G535900 chr3D 93.037 2025 107 14 1673 3677 580539618 580541628 0.000000e+00 2928.0
23 TraesCS3B01G535900 chr3D 90.786 1031 69 13 5552 6578 580541619 580542627 0.000000e+00 1354.0
24 TraesCS3B01G535900 chr3D 92.344 627 35 3 1 615 580538259 580538884 0.000000e+00 880.0
25 TraesCS3B01G535900 chr3D 91.516 554 39 3 968 1521 580538974 580539519 0.000000e+00 756.0
26 TraesCS3B01G535900 chr3D 82.045 440 44 24 6637 7061 580542656 580543075 6.900000e-90 342.0
27 TraesCS3B01G535900 chr1B 95.141 1667 56 5 3916 5557 530470839 530472505 0.000000e+00 2606.0
28 TraesCS3B01G535900 chr1B 94.281 1329 75 1 3919 5246 141119874 141118546 0.000000e+00 2032.0
29 TraesCS3B01G535900 chr1B 96.393 305 11 0 5248 5552 356222690 356222386 2.990000e-138 503.0
30 TraesCS3B01G535900 chr1B 95.951 247 8 1 3671 3915 530470829 530471075 4.040000e-107 399.0
31 TraesCS3B01G535900 chr1B 96.296 243 7 1 3675 3915 530472255 530472497 1.450000e-106 398.0
32 TraesCS3B01G535900 chr5B 90.516 1666 86 23 3919 5553 699788249 699786625 0.000000e+00 2135.0
33 TraesCS3B01G535900 chr5B 93.980 1329 75 3 3919 5246 394972861 394971537 0.000000e+00 2006.0
34 TraesCS3B01G535900 chr5B 93.657 1340 70 13 3919 5246 613280665 613279329 0.000000e+00 1989.0
35 TraesCS3B01G535900 chr5B 95.498 311 14 0 5246 5556 291075676 291075366 1.390000e-136 497.0
36 TraesCS3B01G535900 chr5B 95.765 307 13 0 5246 5552 690031493 690031799 5.000000e-136 496.0
37 TraesCS3B01G535900 chr5B 94.821 251 11 1 3667 3915 492584928 492584678 2.430000e-104 390.0
38 TraesCS3B01G535900 chr2B 95.342 1331 61 1 3916 5246 464438347 464439676 0.000000e+00 2113.0
39 TraesCS3B01G535900 chr2B 93.901 1328 76 3 3919 5246 762387614 762386292 0.000000e+00 1999.0
40 TraesCS3B01G535900 chr2B 89.744 78 8 0 2002 2079 666543481 666543404 4.580000e-17 100.0
41 TraesCS3B01G535900 chr7B 95.256 1328 63 0 3919 5246 184978970 184977643 0.000000e+00 2104.0
42 TraesCS3B01G535900 chr6B 93.912 1347 76 4 3902 5246 346316650 346317992 0.000000e+00 2028.0
43 TraesCS3B01G535900 chr6B 86.434 774 74 17 2907 3675 718384570 718383823 0.000000e+00 819.0
44 TraesCS3B01G535900 chr6B 86.241 705 83 13 2200 2897 718385361 718384664 0.000000e+00 752.0
45 TraesCS3B01G535900 chr6B 79.752 805 90 35 1401 2167 718386247 718385478 3.840000e-142 516.0
46 TraesCS3B01G535900 chr6A 85.148 1488 183 25 2200 3675 616816992 616818453 0.000000e+00 1489.0
47 TraesCS3B01G535900 chr6A 85.714 693 73 14 2456 3139 101388562 101389237 0.000000e+00 708.0
48 TraesCS3B01G535900 chr6A 84.805 691 78 15 2456 3137 44562695 44563367 0.000000e+00 669.0
49 TraesCS3B01G535900 chr6A 84.249 692 84 13 2456 3139 437162862 437163536 0.000000e+00 651.0
50 TraesCS3B01G535900 chr6A 89.683 126 12 1 1395 1519 616816066 616816191 7.460000e-35 159.0
51 TraesCS3B01G535900 chr6D 85.157 1334 150 27 2307 3622 473085051 473083748 0.000000e+00 1323.0
52 TraesCS3B01G535900 chr6D 90.686 408 34 3 1675 2081 329077203 329076799 2.280000e-149 540.0
53 TraesCS3B01G535900 chr6D 86.992 369 37 6 1671 2035 470411104 470411465 8.670000e-109 405.0
54 TraesCS3B01G535900 chr6D 78.281 663 70 32 1401 2034 473086091 473085474 6.850000e-95 359.0
55 TraesCS3B01G535900 chr6D 88.372 129 13 1 1370 1498 329077332 329077206 3.470000e-33 154.0
56 TraesCS3B01G535900 chr6D 100.000 34 0 0 2002 2035 470411464 470411497 6.010000e-06 63.9
57 TraesCS3B01G535900 chr4A 89.118 680 59 10 4889 5556 541676275 541675599 0.000000e+00 832.0
58 TraesCS3B01G535900 chr4A 84.993 693 78 14 2456 3139 638976466 638977141 0.000000e+00 680.0
59 TraesCS3B01G535900 chr2A 89.069 677 59 10 4889 5553 79317689 79318362 0.000000e+00 826.0
60 TraesCS3B01G535900 chr2A 85.265 699 77 14 2456 3145 37891942 37891261 0.000000e+00 697.0
61 TraesCS3B01G535900 chr2A 85.307 701 74 18 2456 3145 530935230 530934548 0.000000e+00 697.0
62 TraesCS3B01G535900 chr2A 84.993 693 77 15 2456 3139 730135446 730136120 0.000000e+00 678.0
63 TraesCS3B01G535900 chr2A 96.429 252 6 2 3666 3915 44030820 44030570 5.180000e-111 412.0
64 TraesCS3B01G535900 chr2A 76.989 817 99 40 1401 2173 579835408 579834637 1.130000e-102 385.0
65 TraesCS3B01G535900 chr1A 86.291 693 72 13 2456 3139 389948707 389949385 0.000000e+00 732.0
66 TraesCS3B01G535900 chr1A 85.408 699 76 14 2456 3145 95468382 95467701 0.000000e+00 702.0
67 TraesCS3B01G535900 chr1A 85.281 693 76 14 2456 3139 115543947 115543272 0.000000e+00 691.0
68 TraesCS3B01G535900 chr1A 84.957 698 80 15 2456 3145 45002563 45001883 0.000000e+00 684.0
69 TraesCS3B01G535900 chr1A 96.296 243 7 1 3675 3915 372230818 372231060 1.450000e-106 398.0
70 TraesCS3B01G535900 chr1A 87.500 160 17 2 1662 1820 372246016 372246173 1.590000e-41 182.0
71 TraesCS3B01G535900 chr4D 90.909 407 34 2 1675 2081 433631509 433631912 1.760000e-150 544.0
72 TraesCS3B01G535900 chr4D 87.597 129 14 1 1370 1498 433631380 433631506 1.610000e-31 148.0
73 TraesCS3B01G535900 chr5A 90.172 407 37 2 1675 2081 610087522 610087119 1.770000e-145 527.0
74 TraesCS3B01G535900 chr7D 87.775 409 39 5 1674 2075 587180167 587180571 1.090000e-127 468.0
75 TraesCS3B01G535900 chr7D 87.705 366 34 6 1674 2035 598005994 598005636 4.010000e-112 416.0
76 TraesCS3B01G535900 chr2D 87.705 366 34 6 1674 2035 587153246 587152888 4.010000e-112 416.0
77 TraesCS3B01G535900 chr2D 86.649 367 38 6 1671 2033 362642502 362642861 5.220000e-106 396.0
78 TraesCS3B01G535900 chr2D 91.026 78 7 0 2002 2079 587152889 587152812 9.850000e-19 106.0
79 TraesCS3B01G535900 chr2D 90.909 77 7 0 2003 2079 362642862 362642938 3.540000e-18 104.0
80 TraesCS3B01G535900 chr7A 88.462 78 9 0 2002 2079 484092639 484092562 2.130000e-15 95.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G535900 chr3B 775824356 775831536 7180 False 3359.750000 11476 98.852500 1 7181 4 chr3B.!!$F4 7180
1 TraesCS3B01G535900 chr3B 276489580 276490908 1328 True 2026.000000 2026 94.206000 3919 5246 1 chr3B.!!$R1 1327
2 TraesCS3B01G535900 chr3B 367841029 367841702 673 False 961.000000 961 92.444000 4890 5562 1 chr3B.!!$F1 672
3 TraesCS3B01G535900 chr3A 716067119 716071450 4331 False 1190.400000 3568 89.723600 968 7178 5 chr3A.!!$F4 6210
4 TraesCS3B01G535900 chr3A 128477326 128478011 685 True 717.000000 717 85.735000 2456 3145 1 chr3A.!!$R1 689
5 TraesCS3B01G535900 chr3A 465662213 465662894 681 True 697.000000 697 85.265000 2456 3145 1 chr3A.!!$R2 689
6 TraesCS3B01G535900 chr3D 580538259 580543075 4816 False 1252.000000 2928 89.945600 1 7061 5 chr3D.!!$F1 7060
7 TraesCS3B01G535900 chr1B 141118546 141119874 1328 True 2032.000000 2032 94.281000 3919 5246 1 chr1B.!!$R1 1327
8 TraesCS3B01G535900 chr1B 530470829 530472505 1676 False 1134.333333 2606 95.796000 3671 5557 3 chr1B.!!$F1 1886
9 TraesCS3B01G535900 chr5B 699786625 699788249 1624 True 2135.000000 2135 90.516000 3919 5553 1 chr5B.!!$R5 1634
10 TraesCS3B01G535900 chr5B 394971537 394972861 1324 True 2006.000000 2006 93.980000 3919 5246 1 chr5B.!!$R2 1327
11 TraesCS3B01G535900 chr5B 613279329 613280665 1336 True 1989.000000 1989 93.657000 3919 5246 1 chr5B.!!$R4 1327
12 TraesCS3B01G535900 chr2B 464438347 464439676 1329 False 2113.000000 2113 95.342000 3916 5246 1 chr2B.!!$F1 1330
13 TraesCS3B01G535900 chr2B 762386292 762387614 1322 True 1999.000000 1999 93.901000 3919 5246 1 chr2B.!!$R2 1327
14 TraesCS3B01G535900 chr7B 184977643 184978970 1327 True 2104.000000 2104 95.256000 3919 5246 1 chr7B.!!$R1 1327
15 TraesCS3B01G535900 chr6B 346316650 346317992 1342 False 2028.000000 2028 93.912000 3902 5246 1 chr6B.!!$F1 1344
16 TraesCS3B01G535900 chr6B 718383823 718386247 2424 True 695.666667 819 84.142333 1401 3675 3 chr6B.!!$R1 2274
17 TraesCS3B01G535900 chr6A 616816066 616818453 2387 False 824.000000 1489 87.415500 1395 3675 2 chr6A.!!$F4 2280
18 TraesCS3B01G535900 chr6A 101388562 101389237 675 False 708.000000 708 85.714000 2456 3139 1 chr6A.!!$F2 683
19 TraesCS3B01G535900 chr6A 44562695 44563367 672 False 669.000000 669 84.805000 2456 3137 1 chr6A.!!$F1 681
20 TraesCS3B01G535900 chr6A 437162862 437163536 674 False 651.000000 651 84.249000 2456 3139 1 chr6A.!!$F3 683
21 TraesCS3B01G535900 chr6D 473083748 473086091 2343 True 841.000000 1323 81.719000 1401 3622 2 chr6D.!!$R2 2221
22 TraesCS3B01G535900 chr6D 329076799 329077332 533 True 347.000000 540 89.529000 1370 2081 2 chr6D.!!$R1 711
23 TraesCS3B01G535900 chr4A 541675599 541676275 676 True 832.000000 832 89.118000 4889 5556 1 chr4A.!!$R1 667
24 TraesCS3B01G535900 chr4A 638976466 638977141 675 False 680.000000 680 84.993000 2456 3139 1 chr4A.!!$F1 683
25 TraesCS3B01G535900 chr2A 79317689 79318362 673 False 826.000000 826 89.069000 4889 5553 1 chr2A.!!$F1 664
26 TraesCS3B01G535900 chr2A 37891261 37891942 681 True 697.000000 697 85.265000 2456 3145 1 chr2A.!!$R1 689
27 TraesCS3B01G535900 chr2A 530934548 530935230 682 True 697.000000 697 85.307000 2456 3145 1 chr2A.!!$R3 689
28 TraesCS3B01G535900 chr2A 730135446 730136120 674 False 678.000000 678 84.993000 2456 3139 1 chr2A.!!$F2 683
29 TraesCS3B01G535900 chr2A 579834637 579835408 771 True 385.000000 385 76.989000 1401 2173 1 chr2A.!!$R4 772
30 TraesCS3B01G535900 chr1A 389948707 389949385 678 False 732.000000 732 86.291000 2456 3139 1 chr1A.!!$F3 683
31 TraesCS3B01G535900 chr1A 95467701 95468382 681 True 702.000000 702 85.408000 2456 3145 1 chr1A.!!$R2 689
32 TraesCS3B01G535900 chr1A 115543272 115543947 675 True 691.000000 691 85.281000 2456 3139 1 chr1A.!!$R3 683
33 TraesCS3B01G535900 chr1A 45001883 45002563 680 True 684.000000 684 84.957000 2456 3145 1 chr1A.!!$R1 689
34 TraesCS3B01G535900 chr4D 433631380 433631912 532 False 346.000000 544 89.253000 1370 2081 2 chr4D.!!$F1 711

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
417 430 0.323302 TGCAACTATGGCGAACCTCA 59.677 50.000 0.0 0.0 36.63 3.86 F
1167 1180 0.036388 GGATCTGACCGCCTCAACAA 60.036 55.000 0.0 0.0 0.00 2.83 F
1328 1344 1.182385 GCCTCCTCCTCTCCGGTATG 61.182 65.000 0.0 0.0 0.00 2.39 F
2255 2576 1.672363 TGGATGTCAAATGAGCGATGC 59.328 47.619 0.0 0.0 0.00 3.91 F
3834 4289 0.251077 CTTGACTCCCAAGCAAGGCT 60.251 55.000 0.0 0.0 44.90 4.58 F
3856 4311 0.036388 CTTGACCCCTAAGCAAGCGA 60.036 55.000 0.0 0.0 33.48 4.93 F
3901 4356 0.108019 CTAACGGACCCATTAGGCCC 59.892 60.000 0.0 0.0 40.58 5.80 F
3991 4681 0.336392 GGGCAAGAGGGAAGGGATTT 59.664 55.000 0.0 0.0 0.00 2.17 F
5575 6375 0.394352 CCTGTGCCCCTTTTATCGCT 60.394 55.000 0.0 0.0 0.00 4.93 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1328 1344 0.767375 TATGCCCTGGAATGAGCCTC 59.233 55.000 0.00 0.00 0.00 4.70 R
2164 2395 1.062525 CCGGCAATACGCTTCAAGC 59.937 57.895 0.00 0.00 41.91 4.01 R
2264 2585 1.135112 GGGCGGACCATTTCATGTTTC 60.135 52.381 0.00 0.00 39.85 2.78 R
3837 4292 0.036388 TCGCTTGCTTAGGGGTCAAG 60.036 55.000 0.00 0.00 39.95 3.02 R
4694 5402 0.395311 TCCGTCTTGGATCGCTACCT 60.395 55.000 0.00 0.00 43.74 3.08 R
5523 6314 1.218844 ACGTAATGGGCCTAATGGGT 58.781 50.000 4.53 0.00 37.43 4.51 R
5750 6550 4.398988 CCTTCAACAAATCATCGGATCCAA 59.601 41.667 13.41 0.00 31.88 3.53 R
5930 6730 3.406764 AGCAAAGAATCACCACAGAGAC 58.593 45.455 0.00 0.00 0.00 3.36 R
6433 7441 0.179000 CCATAGCTCCAGGTGTCACC 59.821 60.000 14.68 14.68 38.99 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 3.747010 ACAACGTATAAACATGGTTCGCA 59.253 39.130 0.00 0.00 0.00 5.10
60 61 1.135083 CCGCCTTGTCGATAGTTCACT 60.135 52.381 0.00 0.00 37.40 3.41
61 62 1.920574 CGCCTTGTCGATAGTTCACTG 59.079 52.381 0.00 0.00 37.40 3.66
86 87 4.464008 TGCATCTTCTTCTCCAAAGTTGT 58.536 39.130 0.00 0.00 0.00 3.32
121 122 0.393132 GAAGAAAGGAAGCCCTCCCG 60.393 60.000 0.00 0.00 46.81 5.14
223 236 2.594592 GCTGGCCAAAGGTCACGT 60.595 61.111 7.01 0.00 32.12 4.49
238 251 1.763256 ACGTGGTGTAGGTGGTGGT 60.763 57.895 0.00 0.00 0.00 4.16
240 253 1.599797 GTGGTGTAGGTGGTGGTGC 60.600 63.158 0.00 0.00 0.00 5.01
349 362 7.859325 ATAAGTACCTAATGTTTGACGCAAT 57.141 32.000 0.00 0.00 0.00 3.56
406 419 2.420022 GCAGGTGACGAATTGCAACTAT 59.580 45.455 0.00 0.00 36.59 2.12
408 421 3.009723 AGGTGACGAATTGCAACTATGG 58.990 45.455 0.00 0.00 28.47 2.74
417 430 0.323302 TGCAACTATGGCGAACCTCA 59.677 50.000 0.00 0.00 36.63 3.86
420 433 2.002586 CAACTATGGCGAACCTCAGTG 58.997 52.381 0.00 0.00 36.63 3.66
458 471 1.190643 GAGGGTTGACTGGGAGAGAG 58.809 60.000 0.00 0.00 0.00 3.20
463 476 1.067213 GTTGACTGGGAGAGAGCTCAC 60.067 57.143 17.77 10.21 45.10 3.51
466 479 0.614415 ACTGGGAGAGAGCTCACCTG 60.614 60.000 17.77 16.91 44.22 4.00
474 487 1.751924 GAGAGCTCACCTGATACGGTT 59.248 52.381 17.77 0.00 34.29 4.44
497 510 1.371183 CAAACCCGACTCTGCCTCA 59.629 57.895 0.00 0.00 0.00 3.86
586 599 3.551454 CCAGTTCGTCGACCTAGTTTCAA 60.551 47.826 10.58 0.00 0.00 2.69
608 621 6.763610 TCAATTGTGGGGTTTTTGTGTAATTC 59.236 34.615 5.13 0.00 0.00 2.17
609 622 5.941555 TTGTGGGGTTTTTGTGTAATTCT 57.058 34.783 0.00 0.00 0.00 2.40
611 624 4.342665 TGTGGGGTTTTTGTGTAATTCTCC 59.657 41.667 0.00 0.00 0.00 3.71
612 625 4.342665 GTGGGGTTTTTGTGTAATTCTCCA 59.657 41.667 0.00 0.00 0.00 3.86
613 626 5.011635 GTGGGGTTTTTGTGTAATTCTCCAT 59.988 40.000 0.00 0.00 0.00 3.41
614 627 5.011533 TGGGGTTTTTGTGTAATTCTCCATG 59.988 40.000 0.00 0.00 0.00 3.66
615 628 4.929211 GGGTTTTTGTGTAATTCTCCATGC 59.071 41.667 0.00 0.00 0.00 4.06
616 629 4.621034 GGTTTTTGTGTAATTCTCCATGCG 59.379 41.667 0.00 0.00 0.00 4.73
1017 1030 1.069090 GATGGCTCATAACCCGCGA 59.931 57.895 8.23 0.00 0.00 5.87
1163 1176 2.764128 GGGGATCTGACCGCCTCA 60.764 66.667 0.00 0.00 36.98 3.86
1166 1179 1.596934 GGATCTGACCGCCTCAACA 59.403 57.895 0.00 0.00 0.00 3.33
1167 1180 0.036388 GGATCTGACCGCCTCAACAA 60.036 55.000 0.00 0.00 0.00 2.83
1168 1181 1.363744 GATCTGACCGCCTCAACAAG 58.636 55.000 0.00 0.00 0.00 3.16
1185 1198 2.376518 ACAAGGCCTTCATCTTCTCCAA 59.623 45.455 17.29 0.00 0.00 3.53
1195 1208 1.438651 TCTTCTCCAACCGCAAATCG 58.561 50.000 0.00 0.00 38.08 3.34
1328 1344 1.182385 GCCTCCTCCTCTCCGGTATG 61.182 65.000 0.00 0.00 0.00 2.39
1612 1669 6.053632 TCACTGGTCATACAACATCTCATT 57.946 37.500 0.00 0.00 0.00 2.57
1632 1743 9.042450 TCTCATTAGGAAACTTAGACCATTACA 57.958 33.333 0.00 0.00 43.67 2.41
1655 1766 5.297776 CACCCTAATCTGTTTATGAAGCCTG 59.702 44.000 0.00 0.00 0.00 4.85
1689 1800 8.911918 TTTTACTTCCATGTAGCTTCAGTTTA 57.088 30.769 0.00 0.00 0.00 2.01
1690 1801 7.900782 TTACTTCCATGTAGCTTCAGTTTAC 57.099 36.000 0.00 0.00 0.00 2.01
1710 1821 7.707893 AGTTTACACGTACTTTGTAGAACACAT 59.292 33.333 18.48 7.37 36.90 3.21
1722 1837 5.630121 TGTAGAACACATTTCCTGACCAAT 58.370 37.500 0.00 0.00 30.04 3.16
1820 1937 7.961325 GCTAATAGCAATTTCAGTTCTTGTC 57.039 36.000 7.49 0.00 41.89 3.18
1831 1948 2.094957 CAGTTCTTGTCCTCGGTCTCTC 60.095 54.545 0.00 0.00 0.00 3.20
1958 2176 1.947456 AGGTGCGGAAAGAAACACTTC 59.053 47.619 0.00 0.00 37.93 3.01
1994 2215 5.869649 TGCCTCATACTATAGCAGAACAA 57.130 39.130 0.00 0.00 0.00 2.83
2075 2299 7.390027 ACTGCTTATTCTAAGTAGCCATATGG 58.610 38.462 18.07 18.07 34.00 2.74
2083 2307 2.348411 GTAGCCATATGGGTGCAGTT 57.652 50.000 32.06 3.10 46.80 3.16
2084 2308 2.654863 GTAGCCATATGGGTGCAGTTT 58.345 47.619 32.06 2.50 46.80 2.66
2088 2312 4.289245 AGCCATATGGGTGCAGTTTTAAT 58.711 39.130 25.40 0.00 45.50 1.40
2090 2314 5.189539 AGCCATATGGGTGCAGTTTTAATTT 59.810 36.000 25.40 0.00 45.50 1.82
2092 2316 6.374053 GCCATATGGGTGCAGTTTTAATTTTT 59.626 34.615 23.30 0.00 39.65 1.94
2158 2389 3.511934 GGTGGTAGCGAATCTAGATGGAT 59.488 47.826 5.86 3.05 0.00 3.41
2164 2395 3.766591 AGCGAATCTAGATGGATGTAGGG 59.233 47.826 5.86 0.00 0.00 3.53
2255 2576 1.672363 TGGATGTCAAATGAGCGATGC 59.328 47.619 0.00 0.00 0.00 3.91
2264 2585 1.162181 ATGAGCGATGCCAATGGTCG 61.162 55.000 7.80 7.80 38.34 4.79
2394 2716 6.575267 TGGATGATTGCACCTTTTATCATTG 58.425 36.000 9.95 0.00 37.73 2.82
2399 2721 5.973899 TTGCACCTTTTATCATTGCAGTA 57.026 34.783 0.00 0.00 43.67 2.74
2615 2940 6.360618 AGGTATTTCTTAAGGCTGATGGAAG 58.639 40.000 1.85 0.00 0.00 3.46
2681 3006 2.283145 ATGGGCATTGGATGAGCTAC 57.717 50.000 0.00 0.00 0.00 3.58
2683 3008 1.565759 TGGGCATTGGATGAGCTACTT 59.434 47.619 0.00 0.00 0.00 2.24
2762 3099 7.542477 TGATTCTTCGACTGTCTTGTTCTTATC 59.458 37.037 6.21 0.54 0.00 1.75
3053 3489 9.227777 AGTTTGTTTATGACCCAAGTTAGTATC 57.772 33.333 0.00 0.00 0.00 2.24
3093 3529 7.857734 TCAACTTTATTTCCGCATTGATAGA 57.142 32.000 0.00 0.00 0.00 1.98
3254 3691 8.540388 ACTGTTGCCTACTGATTCTTAGATTAA 58.460 33.333 0.94 0.00 0.00 1.40
3356 3794 1.136500 CTAAAGGAGGTACACGGAGGC 59.864 57.143 0.00 0.00 0.00 4.70
3495 3942 3.181483 CCCTTGACTATTTGAGCCATTGC 60.181 47.826 0.00 0.00 37.95 3.56
3529 3976 5.276820 GCTGGCATTTAACACTTGTGTTTTC 60.277 40.000 21.76 8.76 33.59 2.29
3675 4130 4.142945 GCTCTGTGTTGCTGAGATTTACTG 60.143 45.833 5.51 0.00 43.31 2.74
3676 4131 4.960938 TCTGTGTTGCTGAGATTTACTGT 58.039 39.130 0.00 0.00 0.00 3.55
3677 4132 5.368145 TCTGTGTTGCTGAGATTTACTGTT 58.632 37.500 0.00 0.00 0.00 3.16
3678 4133 6.521162 TCTGTGTTGCTGAGATTTACTGTTA 58.479 36.000 0.00 0.00 0.00 2.41
3679 4134 7.161404 TCTGTGTTGCTGAGATTTACTGTTAT 58.839 34.615 0.00 0.00 0.00 1.89
3680 4135 7.118245 TCTGTGTTGCTGAGATTTACTGTTATG 59.882 37.037 0.00 0.00 0.00 1.90
3681 4136 6.149308 TGTGTTGCTGAGATTTACTGTTATGG 59.851 38.462 0.00 0.00 0.00 2.74
3682 4137 6.149474 GTGTTGCTGAGATTTACTGTTATGGT 59.851 38.462 0.00 0.00 0.00 3.55
3683 4138 6.149308 TGTTGCTGAGATTTACTGTTATGGTG 59.851 38.462 0.00 0.00 0.00 4.17
3684 4139 4.635765 TGCTGAGATTTACTGTTATGGTGC 59.364 41.667 0.00 0.00 0.00 5.01
3685 4140 4.878397 GCTGAGATTTACTGTTATGGTGCT 59.122 41.667 0.00 0.00 0.00 4.40
3686 4141 5.220739 GCTGAGATTTACTGTTATGGTGCTG 60.221 44.000 0.00 0.00 0.00 4.41
3687 4142 4.635765 TGAGATTTACTGTTATGGTGCTGC 59.364 41.667 0.00 0.00 0.00 5.25
3688 4143 4.848357 AGATTTACTGTTATGGTGCTGCT 58.152 39.130 0.00 0.00 0.00 4.24
3689 4144 5.989477 AGATTTACTGTTATGGTGCTGCTA 58.011 37.500 0.00 0.00 0.00 3.49
3690 4145 6.051717 AGATTTACTGTTATGGTGCTGCTAG 58.948 40.000 0.00 0.00 0.00 3.42
3691 4146 5.414789 TTTACTGTTATGGTGCTGCTAGA 57.585 39.130 0.00 0.00 0.00 2.43
3692 4147 3.981071 ACTGTTATGGTGCTGCTAGAA 57.019 42.857 0.00 0.00 0.00 2.10
3693 4148 3.866651 ACTGTTATGGTGCTGCTAGAAG 58.133 45.455 0.00 0.00 0.00 2.85
3694 4149 3.201290 CTGTTATGGTGCTGCTAGAAGG 58.799 50.000 0.00 0.00 0.00 3.46
3695 4150 2.837591 TGTTATGGTGCTGCTAGAAGGA 59.162 45.455 0.00 0.00 0.00 3.36
3696 4151 3.118629 TGTTATGGTGCTGCTAGAAGGAG 60.119 47.826 0.00 0.00 36.68 3.69
3697 4152 0.835941 ATGGTGCTGCTAGAAGGAGG 59.164 55.000 0.00 0.00 33.92 4.30
3698 4153 1.267574 TGGTGCTGCTAGAAGGAGGG 61.268 60.000 0.00 0.00 33.92 4.30
3699 4154 1.153269 GTGCTGCTAGAAGGAGGGC 60.153 63.158 0.00 0.00 33.92 5.19
3700 4155 2.107953 GCTGCTAGAAGGAGGGCG 59.892 66.667 0.00 0.00 33.92 6.13
3701 4156 2.107953 CTGCTAGAAGGAGGGCGC 59.892 66.667 0.00 0.00 29.18 6.53
3702 4157 3.781770 CTGCTAGAAGGAGGGCGCG 62.782 68.421 0.00 0.00 29.18 6.86
3703 4158 3.528370 GCTAGAAGGAGGGCGCGA 61.528 66.667 12.10 0.00 0.00 5.87
3704 4159 2.725008 CTAGAAGGAGGGCGCGAG 59.275 66.667 12.10 0.00 0.00 5.03
3705 4160 1.824329 CTAGAAGGAGGGCGCGAGA 60.824 63.158 12.10 0.00 0.00 4.04
3706 4161 1.791103 CTAGAAGGAGGGCGCGAGAG 61.791 65.000 12.10 0.00 0.00 3.20
3707 4162 4.214327 GAAGGAGGGCGCGAGAGG 62.214 72.222 12.10 0.00 0.00 3.69
3750 4205 4.803908 GGCCGGGCAAGAGGGAAG 62.804 72.222 25.33 0.00 0.00 3.46
3751 4206 4.803908 GCCGGGCAAGAGGGAAGG 62.804 72.222 15.62 0.00 0.00 3.46
3752 4207 4.115199 CCGGGCAAGAGGGAAGGG 62.115 72.222 0.00 0.00 0.00 3.95
3753 4208 3.009115 CGGGCAAGAGGGAAGGGA 61.009 66.667 0.00 0.00 0.00 4.20
3754 4209 2.378634 CGGGCAAGAGGGAAGGGAT 61.379 63.158 0.00 0.00 0.00 3.85
3755 4210 1.926426 CGGGCAAGAGGGAAGGGATT 61.926 60.000 0.00 0.00 0.00 3.01
3756 4211 0.336392 GGGCAAGAGGGAAGGGATTT 59.664 55.000 0.00 0.00 0.00 2.17
3757 4212 1.686428 GGGCAAGAGGGAAGGGATTTC 60.686 57.143 0.00 0.00 34.93 2.17
3772 4227 6.782082 AGGGATTTCCTTCTTAATTCTTGC 57.218 37.500 0.00 0.00 45.47 4.01
3773 4228 6.497640 AGGGATTTCCTTCTTAATTCTTGCT 58.502 36.000 0.00 0.00 45.47 3.91
3774 4229 6.956435 AGGGATTTCCTTCTTAATTCTTGCTT 59.044 34.615 0.00 0.00 45.47 3.91
3775 4230 7.455953 AGGGATTTCCTTCTTAATTCTTGCTTT 59.544 33.333 0.00 0.00 45.47 3.51
3776 4231 7.761704 GGGATTTCCTTCTTAATTCTTGCTTTC 59.238 37.037 0.00 0.00 35.95 2.62
3777 4232 8.526978 GGATTTCCTTCTTAATTCTTGCTTTCT 58.473 33.333 0.00 0.00 0.00 2.52
3778 4233 9.920133 GATTTCCTTCTTAATTCTTGCTTTCTT 57.080 29.630 0.00 0.00 0.00 2.52
3781 4236 9.793259 TTCCTTCTTAATTCTTGCTTTCTTAGA 57.207 29.630 0.00 0.00 0.00 2.10
3782 4237 9.965902 TCCTTCTTAATTCTTGCTTTCTTAGAT 57.034 29.630 0.00 0.00 0.00 1.98
3792 4247 9.896645 TTCTTGCTTTCTTAGATTGATACATCT 57.103 29.630 0.00 0.00 0.00 2.90
3793 4248 9.539825 TCTTGCTTTCTTAGATTGATACATCTC 57.460 33.333 0.00 0.00 0.00 2.75
3794 4249 8.668510 TTGCTTTCTTAGATTGATACATCTCC 57.331 34.615 0.00 0.00 0.00 3.71
3795 4250 8.027524 TGCTTTCTTAGATTGATACATCTCCT 57.972 34.615 0.00 0.00 0.00 3.69
3796 4251 8.147058 TGCTTTCTTAGATTGATACATCTCCTC 58.853 37.037 0.00 0.00 0.00 3.71
3797 4252 8.367156 GCTTTCTTAGATTGATACATCTCCTCT 58.633 37.037 0.00 0.00 0.00 3.69
3798 4253 9.912634 CTTTCTTAGATTGATACATCTCCTCTC 57.087 37.037 0.00 0.00 0.00 3.20
3799 4254 9.653516 TTTCTTAGATTGATACATCTCCTCTCT 57.346 33.333 0.00 0.00 0.00 3.10
3800 4255 9.653516 TTCTTAGATTGATACATCTCCTCTCTT 57.346 33.333 0.00 0.00 0.00 2.85
3801 4256 9.653516 TCTTAGATTGATACATCTCCTCTCTTT 57.346 33.333 0.00 0.00 0.00 2.52
3802 4257 9.912634 CTTAGATTGATACATCTCCTCTCTTTC 57.087 37.037 0.00 0.00 0.00 2.62
3803 4258 9.653516 TTAGATTGATACATCTCCTCTCTTTCT 57.346 33.333 0.00 0.00 0.00 2.52
3805 4260 9.827198 AGATTGATACATCTCCTCTCTTTCTAT 57.173 33.333 0.00 0.00 0.00 1.98
3809 4264 9.958180 TGATACATCTCCTCTCTTTCTATAGAG 57.042 37.037 2.02 0.00 42.46 2.43
3821 4276 9.756571 TCTCTTTCTATAGAGGTTTACTTGACT 57.243 33.333 2.02 0.00 41.62 3.41
3823 4278 8.968969 TCTTTCTATAGAGGTTTACTTGACTCC 58.031 37.037 2.02 0.00 0.00 3.85
3824 4279 7.657023 TTCTATAGAGGTTTACTTGACTCCC 57.343 40.000 2.02 0.00 0.00 4.30
3825 4280 6.738635 TCTATAGAGGTTTACTTGACTCCCA 58.261 40.000 0.00 0.00 0.00 4.37
3826 4281 7.186972 TCTATAGAGGTTTACTTGACTCCCAA 58.813 38.462 0.00 0.00 0.00 4.12
3833 4288 2.261215 CTTGACTCCCAAGCAAGGC 58.739 57.895 0.00 0.00 44.90 4.35
3834 4289 0.251077 CTTGACTCCCAAGCAAGGCT 60.251 55.000 0.00 0.00 44.90 4.58
3850 4305 1.560146 AGGCTTACTTGACCCCTAAGC 59.440 52.381 0.00 0.00 41.07 3.09
3851 4306 1.280998 GGCTTACTTGACCCCTAAGCA 59.719 52.381 10.04 0.00 42.79 3.91
3852 4307 2.290705 GGCTTACTTGACCCCTAAGCAA 60.291 50.000 10.04 0.00 42.79 3.91
3853 4308 3.010420 GCTTACTTGACCCCTAAGCAAG 58.990 50.000 0.00 0.00 41.32 4.01
3854 4309 2.781681 TACTTGACCCCTAAGCAAGC 57.218 50.000 0.00 0.00 41.97 4.01
3855 4310 0.321653 ACTTGACCCCTAAGCAAGCG 60.322 55.000 0.00 0.00 41.97 4.68
3856 4311 0.036388 CTTGACCCCTAAGCAAGCGA 60.036 55.000 0.00 0.00 33.48 4.93
3857 4312 0.321298 TTGACCCCTAAGCAAGCGAC 60.321 55.000 0.00 0.00 0.00 5.19
3858 4313 1.449778 GACCCCTAAGCAAGCGACC 60.450 63.158 0.00 0.00 0.00 4.79
3859 4314 2.124695 CCCCTAAGCAAGCGACCC 60.125 66.667 0.00 0.00 0.00 4.46
3860 4315 2.670148 CCCCTAAGCAAGCGACCCT 61.670 63.158 0.00 0.00 0.00 4.34
3861 4316 1.299976 CCCTAAGCAAGCGACCCTT 59.700 57.895 0.00 0.00 0.00 3.95
3862 4317 0.539986 CCCTAAGCAAGCGACCCTTA 59.460 55.000 0.00 0.00 31.00 2.69
3863 4318 1.141053 CCCTAAGCAAGCGACCCTTAT 59.859 52.381 0.00 0.00 31.00 1.73
3864 4319 2.367567 CCCTAAGCAAGCGACCCTTATA 59.632 50.000 0.00 0.00 31.00 0.98
3865 4320 3.008049 CCCTAAGCAAGCGACCCTTATAT 59.992 47.826 0.00 0.00 31.00 0.86
3866 4321 4.246458 CCTAAGCAAGCGACCCTTATATC 58.754 47.826 0.00 0.00 31.00 1.63
3867 4322 4.021016 CCTAAGCAAGCGACCCTTATATCT 60.021 45.833 0.00 0.00 31.00 1.98
3868 4323 5.185249 CCTAAGCAAGCGACCCTTATATCTA 59.815 44.000 0.00 0.00 31.00 1.98
3869 4324 5.546621 AAGCAAGCGACCCTTATATCTAA 57.453 39.130 0.00 0.00 31.00 2.10
3870 4325 5.746990 AGCAAGCGACCCTTATATCTAAT 57.253 39.130 0.00 0.00 31.00 1.73
3871 4326 6.115448 AGCAAGCGACCCTTATATCTAATT 57.885 37.500 0.00 0.00 31.00 1.40
3872 4327 7.241042 AGCAAGCGACCCTTATATCTAATTA 57.759 36.000 0.00 0.00 31.00 1.40
3873 4328 7.676947 AGCAAGCGACCCTTATATCTAATTAA 58.323 34.615 0.00 0.00 31.00 1.40
3874 4329 7.603024 AGCAAGCGACCCTTATATCTAATTAAC 59.397 37.037 0.00 0.00 31.00 2.01
3875 4330 7.148457 GCAAGCGACCCTTATATCTAATTAACC 60.148 40.741 0.00 0.00 31.00 2.85
3876 4331 6.944096 AGCGACCCTTATATCTAATTAACCC 58.056 40.000 0.00 0.00 0.00 4.11
3877 4332 6.729569 AGCGACCCTTATATCTAATTAACCCT 59.270 38.462 0.00 0.00 0.00 4.34
3878 4333 7.897565 AGCGACCCTTATATCTAATTAACCCTA 59.102 37.037 0.00 0.00 0.00 3.53
3879 4334 8.534496 GCGACCCTTATATCTAATTAACCCTAA 58.466 37.037 0.00 0.00 0.00 2.69
3889 4344 8.773033 ATCTAATTAACCCTAAGACTAACGGA 57.227 34.615 0.00 0.00 0.00 4.69
3890 4345 8.000780 TCTAATTAACCCTAAGACTAACGGAC 57.999 38.462 0.00 0.00 0.00 4.79
3891 4346 5.604758 ATTAACCCTAAGACTAACGGACC 57.395 43.478 0.00 0.00 0.00 4.46
3892 4347 1.857965 ACCCTAAGACTAACGGACCC 58.142 55.000 0.00 0.00 0.00 4.46
3893 4348 1.077663 ACCCTAAGACTAACGGACCCA 59.922 52.381 0.00 0.00 0.00 4.51
3894 4349 2.292719 ACCCTAAGACTAACGGACCCAT 60.293 50.000 0.00 0.00 0.00 4.00
3895 4350 2.770232 CCCTAAGACTAACGGACCCATT 59.230 50.000 0.00 0.00 0.00 3.16
3896 4351 3.962718 CCCTAAGACTAACGGACCCATTA 59.037 47.826 0.00 0.00 0.00 1.90
3897 4352 4.038883 CCCTAAGACTAACGGACCCATTAG 59.961 50.000 8.14 8.14 35.03 1.73
3898 4353 4.038883 CCTAAGACTAACGGACCCATTAGG 59.961 50.000 12.62 0.00 43.78 2.69
3899 4354 1.761198 AGACTAACGGACCCATTAGGC 59.239 52.381 12.62 10.29 40.58 3.93
3900 4355 0.835276 ACTAACGGACCCATTAGGCC 59.165 55.000 12.62 0.00 40.58 5.19
3901 4356 0.108019 CTAACGGACCCATTAGGCCC 59.892 60.000 0.00 0.00 40.58 5.80
3902 4357 0.620990 TAACGGACCCATTAGGCCCA 60.621 55.000 0.00 0.00 40.58 5.36
3903 4358 1.286305 AACGGACCCATTAGGCCCAT 61.286 55.000 0.00 0.00 40.58 4.00
3904 4359 1.286305 ACGGACCCATTAGGCCCATT 61.286 55.000 0.00 0.00 40.58 3.16
3905 4360 0.768622 CGGACCCATTAGGCCCATTA 59.231 55.000 0.00 0.00 40.58 1.90
3906 4361 1.544759 CGGACCCATTAGGCCCATTAC 60.545 57.143 0.00 0.00 40.58 1.89
3907 4362 1.544759 GGACCCATTAGGCCCATTACG 60.545 57.143 0.00 0.00 40.58 3.18
3908 4363 1.142262 GACCCATTAGGCCCATTACGT 59.858 52.381 0.00 0.00 40.58 3.57
3909 4364 2.369532 GACCCATTAGGCCCATTACGTA 59.630 50.000 0.00 0.00 40.58 3.57
3910 4365 2.105306 ACCCATTAGGCCCATTACGTAC 59.895 50.000 0.00 0.00 40.58 3.67
3911 4366 2.370849 CCCATTAGGCCCATTACGTACT 59.629 50.000 0.00 0.00 0.00 2.73
3912 4367 3.556423 CCCATTAGGCCCATTACGTACTC 60.556 52.174 0.00 0.00 0.00 2.59
3913 4368 3.323979 CCATTAGGCCCATTACGTACTCT 59.676 47.826 0.00 0.00 0.00 3.24
3914 4369 4.525487 CCATTAGGCCCATTACGTACTCTA 59.475 45.833 0.00 0.00 0.00 2.43
3917 4372 2.091444 AGGCCCATTACGTACTCTAGGT 60.091 50.000 0.00 0.00 0.00 3.08
3936 4391 2.726351 GCTGCTAGAAGGAGGGCGT 61.726 63.158 0.00 0.00 33.92 5.68
3984 4674 4.033776 CGGCTGGGCAAGAGGGAA 62.034 66.667 0.00 0.00 0.00 3.97
3985 4675 2.044551 GGCTGGGCAAGAGGGAAG 60.045 66.667 0.00 0.00 0.00 3.46
3986 4676 2.044551 GCTGGGCAAGAGGGAAGG 60.045 66.667 0.00 0.00 0.00 3.46
3987 4677 2.679716 CTGGGCAAGAGGGAAGGG 59.320 66.667 0.00 0.00 0.00 3.95
3988 4678 1.925455 CTGGGCAAGAGGGAAGGGA 60.925 63.158 0.00 0.00 0.00 4.20
3989 4679 1.230281 TGGGCAAGAGGGAAGGGAT 60.230 57.895 0.00 0.00 0.00 3.85
3990 4680 0.850883 TGGGCAAGAGGGAAGGGATT 60.851 55.000 0.00 0.00 0.00 3.01
3991 4681 0.336392 GGGCAAGAGGGAAGGGATTT 59.664 55.000 0.00 0.00 0.00 2.17
3992 4682 1.686428 GGGCAAGAGGGAAGGGATTTC 60.686 57.143 0.00 0.00 34.93 2.17
4007 4697 6.782082 AGGGATTTCCTTCTTAATTCTTGC 57.218 37.500 0.00 0.00 45.47 4.01
4008 4698 6.497640 AGGGATTTCCTTCTTAATTCTTGCT 58.502 36.000 0.00 0.00 45.47 3.91
4009 4699 6.956435 AGGGATTTCCTTCTTAATTCTTGCTT 59.044 34.615 0.00 0.00 45.47 3.91
4010 4700 7.455953 AGGGATTTCCTTCTTAATTCTTGCTTT 59.544 33.333 0.00 0.00 45.47 3.51
4011 4701 7.761704 GGGATTTCCTTCTTAATTCTTGCTTTC 59.238 37.037 0.00 0.00 35.95 2.62
4449 5155 1.899437 GAATGTCGAGGAGGGGTGCA 61.899 60.000 0.00 0.00 0.00 4.57
4493 5201 1.377725 CTTTGAGGTCGCTGCCCAT 60.378 57.895 0.00 0.00 0.00 4.00
4546 5254 2.194056 CCGCATGCCCAAGATCCT 59.806 61.111 13.15 0.00 0.00 3.24
4619 5327 4.994471 CGGCAGCTGCAGACCACA 62.994 66.667 37.63 0.00 44.36 4.17
5407 6194 7.455953 AGGGATTTCCTTCTTAATTCTTGCTTT 59.544 33.333 0.00 0.00 45.47 3.51
5408 6195 7.761704 GGGATTTCCTTCTTAATTCTTGCTTTC 59.238 37.037 0.00 0.00 35.95 2.62
5523 6314 8.773033 ATCTAATTAACCCTAAGACTAACGGA 57.227 34.615 0.00 0.00 0.00 4.69
5572 6372 4.709886 ACATTTACCTGTGCCCCTTTTATC 59.290 41.667 0.00 0.00 0.00 1.75
5575 6375 0.394352 CCTGTGCCCCTTTTATCGCT 60.394 55.000 0.00 0.00 0.00 4.93
5576 6376 1.017387 CTGTGCCCCTTTTATCGCTC 58.983 55.000 0.00 0.00 0.00 5.03
5615 6415 0.707616 AGGACCTGAGCTACCTCACT 59.292 55.000 0.00 0.00 42.98 3.41
5721 6521 8.021898 AGGAAAACTTCTTGATCAAATTTGGA 57.978 30.769 17.90 4.30 0.00 3.53
5750 6550 0.962356 GCTAATGCCACACCTGTGCT 60.962 55.000 0.00 0.00 44.34 4.40
5930 6730 6.237942 CGTTCTCAAGTATGGCAAGTGATAAG 60.238 42.308 0.00 0.00 0.00 1.73
5952 6754 4.284490 AGTCTCTGTGGTGATTCTTTGCTA 59.716 41.667 0.00 0.00 0.00 3.49
5959 6761 7.933577 TCTGTGGTGATTCTTTGCTATATTAGG 59.066 37.037 0.00 0.00 0.00 2.69
5963 6765 9.866655 TGGTGATTCTTTGCTATATTAGGAAAT 57.133 29.630 2.34 0.00 43.59 2.17
5994 6796 3.302365 CATTTGGACTGGAAATGCGTT 57.698 42.857 0.00 0.00 34.82 4.84
6020 6948 7.411808 AGAACCTGAGTAATAGTAGTCTTCCA 58.588 38.462 6.59 0.00 31.76 3.53
6171 7099 2.094957 CCCTGACTCTCTTCGTCAACTC 60.095 54.545 0.00 0.00 40.53 3.01
6180 7108 2.364970 TCTTCGTCAACTCGGGGTTTAA 59.635 45.455 0.00 0.00 35.74 1.52
6198 7126 1.252904 AACTTAGCGGTGCCGAGGTA 61.253 55.000 15.45 0.00 42.83 3.08
6202 7130 2.635787 TAGCGGTGCCGAGGTAGGAT 62.636 60.000 15.45 0.00 42.83 3.24
6204 7132 1.533469 GCGGTGCCGAGGTAGGATAT 61.533 60.000 15.45 0.00 42.83 1.63
6225 7153 8.429641 GGATATTTTCTCTATTGACACCCTGTA 58.570 37.037 0.00 0.00 0.00 2.74
6231 7159 5.183331 TCTCTATTGACACCCTGTATATCGC 59.817 44.000 0.00 0.00 0.00 4.58
6232 7160 5.077564 TCTATTGACACCCTGTATATCGCT 58.922 41.667 0.00 0.00 0.00 4.93
6233 7161 3.452755 TTGACACCCTGTATATCGCTG 57.547 47.619 0.00 0.00 0.00 5.18
6234 7162 2.384828 TGACACCCTGTATATCGCTGT 58.615 47.619 0.00 0.00 0.00 4.40
6235 7163 2.361119 TGACACCCTGTATATCGCTGTC 59.639 50.000 0.00 0.00 0.00 3.51
6236 7164 2.361119 GACACCCTGTATATCGCTGTCA 59.639 50.000 0.00 0.00 0.00 3.58
6237 7165 2.764010 ACACCCTGTATATCGCTGTCAA 59.236 45.455 0.00 0.00 0.00 3.18
6238 7166 3.388024 ACACCCTGTATATCGCTGTCAAT 59.612 43.478 0.00 0.00 0.00 2.57
6267 7275 9.962783 GTCATTACTCGTTACTGAGGTAATTAT 57.037 33.333 8.50 0.00 39.67 1.28
6283 7291 6.713450 AGGTAATTATTTGTTCTCCGTGTGTT 59.287 34.615 0.00 0.00 0.00 3.32
6321 7329 1.476085 CATGCTGGGCGGTTGAAAATA 59.524 47.619 0.00 0.00 0.00 1.40
6335 7343 7.542130 GCGGTTGAAAATATGATTCTTCAAGTT 59.458 33.333 0.00 0.00 38.19 2.66
6352 7360 4.469586 TCAAGTTGTAGCATCATAGGGACA 59.530 41.667 2.11 0.00 0.00 4.02
6360 7368 2.480419 GCATCATAGGGACATTGTACGC 59.520 50.000 0.00 0.00 0.00 4.42
6370 7378 4.156008 GGGACATTGTACGCTCAGATTTTT 59.844 41.667 0.00 0.00 0.00 1.94
6378 7386 7.987268 TGTACGCTCAGATTTTTAGATACAG 57.013 36.000 0.00 0.00 0.00 2.74
6386 7394 7.568349 TCAGATTTTTAGATACAGGTCAGCAT 58.432 34.615 0.00 0.00 0.00 3.79
6450 7458 0.614979 ACGGTGACACCTGGAGCTAT 60.615 55.000 22.14 0.00 35.66 2.97
6453 7461 0.905357 GTGACACCTGGAGCTATGGT 59.095 55.000 0.00 0.00 33.87 3.55
6459 7467 1.123077 CCTGGAGCTATGGTGTGCTA 58.877 55.000 0.00 0.00 39.91 3.49
6526 7554 1.554160 CTGAGGATGAGCAGAAGGTGT 59.446 52.381 0.00 0.00 34.06 4.16
6536 7564 0.474184 CAGAAGGTGTTGGACTGGGT 59.526 55.000 0.00 0.00 0.00 4.51
6537 7565 0.765510 AGAAGGTGTTGGACTGGGTC 59.234 55.000 0.00 0.00 0.00 4.46
6539 7567 0.182775 AAGGTGTTGGACTGGGTCAC 59.817 55.000 0.14 0.00 33.68 3.67
6540 7568 0.694444 AGGTGTTGGACTGGGTCACT 60.694 55.000 0.14 0.00 33.68 3.41
6543 7571 1.073199 GTTGGACTGGGTCACTGGG 59.927 63.158 0.14 0.00 33.68 4.45
6544 7572 2.829384 TTGGACTGGGTCACTGGGC 61.829 63.158 0.14 0.00 33.68 5.36
6546 7574 2.829384 GGACTGGGTCACTGGGCAA 61.829 63.158 0.14 0.00 33.68 4.52
6547 7575 1.150536 GACTGGGTCACTGGGCAAA 59.849 57.895 0.00 0.00 32.09 3.68
6552 7580 1.607467 GGTCACTGGGCAAAGGCAT 60.607 57.895 0.00 0.00 43.71 4.40
6553 7581 0.323360 GGTCACTGGGCAAAGGCATA 60.323 55.000 0.00 0.00 43.71 3.14
6554 7582 1.686115 GGTCACTGGGCAAAGGCATAT 60.686 52.381 0.00 0.00 43.71 1.78
6555 7583 1.678101 GTCACTGGGCAAAGGCATATC 59.322 52.381 0.00 0.00 43.71 1.63
6556 7584 0.664761 CACTGGGCAAAGGCATATCG 59.335 55.000 0.00 0.00 43.71 2.92
6557 7585 0.255890 ACTGGGCAAAGGCATATCGT 59.744 50.000 0.00 0.00 43.71 3.73
6558 7586 0.947244 CTGGGCAAAGGCATATCGTC 59.053 55.000 0.00 0.00 43.71 4.20
6578 7606 4.142160 CGTCAGGTGTTGATCTGAATCCTA 60.142 45.833 0.00 0.00 41.18 2.94
6579 7607 5.355596 GTCAGGTGTTGATCTGAATCCTAG 58.644 45.833 0.00 0.00 41.18 3.02
6580 7608 5.026121 TCAGGTGTTGATCTGAATCCTAGT 58.974 41.667 0.00 0.00 36.32 2.57
6581 7609 5.485353 TCAGGTGTTGATCTGAATCCTAGTT 59.515 40.000 0.00 0.00 36.32 2.24
6583 7611 7.180229 TCAGGTGTTGATCTGAATCCTAGTTAA 59.820 37.037 0.00 0.00 36.32 2.01
6584 7612 7.989741 CAGGTGTTGATCTGAATCCTAGTTAAT 59.010 37.037 0.00 0.00 31.03 1.40
6585 7613 8.552296 AGGTGTTGATCTGAATCCTAGTTAATT 58.448 33.333 0.00 0.00 0.00 1.40
6586 7614 8.616076 GGTGTTGATCTGAATCCTAGTTAATTG 58.384 37.037 0.00 0.00 0.00 2.32
6587 7615 9.383519 GTGTTGATCTGAATCCTAGTTAATTGA 57.616 33.333 0.00 0.00 0.00 2.57
6589 7617 9.050601 GTTGATCTGAATCCTAGTTAATTGAGG 57.949 37.037 0.00 0.00 0.00 3.86
6590 7618 8.324191 TGATCTGAATCCTAGTTAATTGAGGT 57.676 34.615 0.00 0.00 0.00 3.85
6592 7620 6.349300 TCTGAATCCTAGTTAATTGAGGTGC 58.651 40.000 0.00 0.00 0.00 5.01
6593 7621 6.156949 TCTGAATCCTAGTTAATTGAGGTGCT 59.843 38.462 0.00 0.00 0.00 4.40
6594 7622 6.721318 TGAATCCTAGTTAATTGAGGTGCTT 58.279 36.000 0.00 0.00 0.00 3.91
6595 7623 7.857456 TGAATCCTAGTTAATTGAGGTGCTTA 58.143 34.615 0.00 0.00 0.00 3.09
6596 7624 7.769044 TGAATCCTAGTTAATTGAGGTGCTTAC 59.231 37.037 0.00 0.00 0.00 2.34
6597 7625 6.614694 TCCTAGTTAATTGAGGTGCTTACA 57.385 37.500 0.00 0.00 0.00 2.41
6600 7628 8.934697 TCCTAGTTAATTGAGGTGCTTACATAT 58.065 33.333 0.00 0.00 0.00 1.78
6609 7637 8.662781 TTGAGGTGCTTACATATAACTGAATC 57.337 34.615 0.00 0.00 0.00 2.52
6611 7639 7.071196 TGAGGTGCTTACATATAACTGAATCCT 59.929 37.037 0.00 0.00 0.00 3.24
6612 7640 7.806180 AGGTGCTTACATATAACTGAATCCTT 58.194 34.615 0.00 0.00 0.00 3.36
6613 7641 7.716998 AGGTGCTTACATATAACTGAATCCTTG 59.283 37.037 0.00 0.00 0.00 3.61
6614 7642 7.499232 GGTGCTTACATATAACTGAATCCTTGT 59.501 37.037 0.00 0.00 0.00 3.16
6779 8272 4.074627 TGTAATCCAAACAACTCGGTGA 57.925 40.909 0.00 0.00 0.00 4.02
6782 8275 4.766404 AATCCAAACAACTCGGTGAATC 57.234 40.909 0.00 0.00 0.00 2.52
7006 8518 9.729023 TTAACAATGCCATGAATATTTTCTACG 57.271 29.630 0.00 0.00 32.78 3.51
7018 8530 9.004717 TGAATATTTTCTACGGAAATGTGAACA 57.995 29.630 0.00 0.00 40.57 3.18
7019 8531 9.274065 GAATATTTTCTACGGAAATGTGAACAC 57.726 33.333 0.00 0.00 40.57 3.32
7022 8534 6.687081 TTTCTACGGAAATGTGAACACTTT 57.313 33.333 6.51 3.72 36.63 2.66
7023 8535 7.789273 TTTCTACGGAAATGTGAACACTTTA 57.211 32.000 6.51 0.00 36.63 1.85
7024 8536 7.789273 TTCTACGGAAATGTGAACACTTTAA 57.211 32.000 6.51 0.00 0.00 1.52
7028 8541 7.692908 ACGGAAATGTGAACACTTTAAAATG 57.307 32.000 6.51 0.00 0.00 2.32
7036 8549 9.985730 ATGTGAACACTTTAAAATGTGATGAAT 57.014 25.926 12.96 0.00 37.47 2.57
7136 8649 4.040706 ACCCTGCATGAACATTTTGTGAAT 59.959 37.500 0.00 0.00 0.00 2.57
7140 8653 4.211584 TGCATGAACATTTTGTGAATGTGC 59.788 37.500 0.00 4.33 40.43 4.57
7142 8655 5.613795 GCATGAACATTTTGTGAATGTGCAG 60.614 40.000 15.49 10.07 46.19 4.41
7148 8661 3.435105 TTTGTGAATGTGCAGTGAACC 57.565 42.857 0.00 0.00 0.00 3.62
7154 8667 4.976116 GTGAATGTGCAGTGAACCTTTTAC 59.024 41.667 0.00 0.00 0.00 2.01
7160 8673 6.734137 TGTGCAGTGAACCTTTTACATAAAG 58.266 36.000 0.00 0.00 0.00 1.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 6.417191 TTCTTCTGCGAACCATGTTTATAC 57.583 37.500 0.00 0.00 0.00 1.47
19 20 0.389166 AGCCGTCTCTTTCTTCTGCG 60.389 55.000 0.00 0.00 0.00 5.18
22 23 0.899019 GGGAGCCGTCTCTTTCTTCT 59.101 55.000 0.00 0.00 39.31 2.85
42 43 1.661112 GCAGTGAACTATCGACAAGGC 59.339 52.381 0.00 0.00 0.00 4.35
60 61 2.793288 TGGAGAAGAAGATGCATGCA 57.207 45.000 25.04 25.04 0.00 3.96
61 62 3.442977 ACTTTGGAGAAGAAGATGCATGC 59.557 43.478 11.82 11.82 0.00 4.06
86 87 1.536907 TTCGTTGCCCCCTAGGTCA 60.537 57.895 8.29 0.00 38.26 4.02
100 101 0.325272 GGAGGGCTTCCTTTCTTCGT 59.675 55.000 8.66 0.00 43.16 3.85
143 144 4.329545 GAGAAGTGGTGGCGGCCA 62.330 66.667 19.77 19.77 35.93 5.36
165 178 4.410400 GTGGGAAGCCAGGGACGG 62.410 72.222 0.00 0.00 0.00 4.79
202 215 2.032681 GACCTTTGGCCAGCGACT 59.967 61.111 5.11 0.00 0.00 4.18
203 216 2.281484 TGACCTTTGGCCAGCGAC 60.281 61.111 5.11 0.00 0.00 5.19
223 236 2.833227 GCACCACCACCTACACCA 59.167 61.111 0.00 0.00 0.00 4.17
335 348 2.035704 TGCCTTCATTGCGTCAAACATT 59.964 40.909 0.00 0.00 0.00 2.71
344 357 0.590195 GCTCCTATGCCTTCATTGCG 59.410 55.000 0.00 0.00 34.22 4.85
349 362 1.137086 GTTCGAGCTCCTATGCCTTCA 59.863 52.381 8.47 0.00 0.00 3.02
390 403 1.396648 CGCCATAGTTGCAATTCGTCA 59.603 47.619 0.59 0.00 0.00 4.35
393 406 2.440501 GTTCGCCATAGTTGCAATTCG 58.559 47.619 0.59 0.00 0.00 3.34
406 419 3.636231 CCCCACTGAGGTTCGCCA 61.636 66.667 0.00 0.00 40.60 5.69
445 458 0.613292 GGTGAGCTCTCTCCCAGTCA 60.613 60.000 16.19 0.00 38.58 3.41
458 471 2.000447 GTTGAACCGTATCAGGTGAGC 59.000 52.381 0.00 0.00 45.21 4.26
463 476 2.486592 GGTTTGGTTGAACCGTATCAGG 59.513 50.000 10.16 0.00 42.58 3.86
474 487 0.534203 GCAGAGTCGGGTTTGGTTGA 60.534 55.000 0.00 0.00 0.00 3.18
550 563 2.401351 GAACTGGTACCACACTTCGTC 58.599 52.381 11.60 0.00 0.00 4.20
586 599 6.463755 GGAGAATTACACAAAAACCCCACAAT 60.464 38.462 0.00 0.00 0.00 2.71
1017 1030 2.524394 AGGAGGCGGCGGATGTAT 60.524 61.111 9.78 0.00 0.00 2.29
1163 1176 2.376518 TGGAGAAGATGAAGGCCTTGTT 59.623 45.455 26.25 9.95 0.00 2.83
1166 1179 2.291217 GGTTGGAGAAGATGAAGGCCTT 60.291 50.000 20.65 20.65 0.00 4.35
1167 1180 1.283321 GGTTGGAGAAGATGAAGGCCT 59.717 52.381 0.00 0.00 0.00 5.19
1168 1181 1.756430 GGTTGGAGAAGATGAAGGCC 58.244 55.000 0.00 0.00 0.00 5.19
1169 1182 1.373570 CGGTTGGAGAAGATGAAGGC 58.626 55.000 0.00 0.00 0.00 4.35
1170 1183 1.339055 TGCGGTTGGAGAAGATGAAGG 60.339 52.381 0.00 0.00 0.00 3.46
1171 1184 2.099141 TGCGGTTGGAGAAGATGAAG 57.901 50.000 0.00 0.00 0.00 3.02
1172 1185 2.559698 TTGCGGTTGGAGAAGATGAA 57.440 45.000 0.00 0.00 0.00 2.57
1195 1208 3.400255 GGTAAATCTACTCGGCCAATCC 58.600 50.000 2.24 0.00 0.00 3.01
1200 1213 2.433239 TCAAGGGTAAATCTACTCGGCC 59.567 50.000 0.00 0.00 33.29 6.13
1214 1227 3.664240 GGGAAACCGAATCAAGGGT 57.336 52.632 0.00 0.00 43.64 4.34
1309 1325 1.154221 ATACCGGAGAGGAGGAGGC 59.846 63.158 9.46 0.00 45.00 4.70
1323 1339 1.072965 CCCTGGAATGAGCCTCATACC 59.927 57.143 7.81 3.18 35.76 2.73
1328 1344 0.767375 TATGCCCTGGAATGAGCCTC 59.233 55.000 0.00 0.00 0.00 4.70
1380 1396 2.629051 CAACGGGGAGATTAGGTTGAC 58.371 52.381 0.00 0.00 40.16 3.18
1510 1528 3.072915 TGAGTGGGCTCTCATCAGAAAAA 59.927 43.478 8.36 0.00 42.13 1.94
1541 1583 8.882736 TGATTTCACATATAACAGACACATGTC 58.117 33.333 3.72 3.72 45.08 3.06
1571 1623 9.774742 GACCAGTGATGTGATAAGATTAAAAAC 57.225 33.333 0.00 0.00 0.00 2.43
1572 1624 9.513906 TGACCAGTGATGTGATAAGATTAAAAA 57.486 29.630 0.00 0.00 0.00 1.94
1573 1625 9.685276 ATGACCAGTGATGTGATAAGATTAAAA 57.315 29.630 0.00 0.00 0.00 1.52
1575 1627 9.764363 GTATGACCAGTGATGTGATAAGATTAA 57.236 33.333 0.00 0.00 0.00 1.40
1576 1628 8.923270 TGTATGACCAGTGATGTGATAAGATTA 58.077 33.333 0.00 0.00 0.00 1.75
1588 1641 5.682234 TGAGATGTTGTATGACCAGTGAT 57.318 39.130 0.00 0.00 0.00 3.06
1612 1669 6.027482 AGGGTGTAATGGTCTAAGTTTCCTA 58.973 40.000 0.00 0.00 0.00 2.94
1632 1743 5.044846 ACAGGCTTCATAAACAGATTAGGGT 60.045 40.000 0.00 0.00 0.00 4.34
1655 1766 5.453567 ACATGGAAGTAAAAGGAGCAAAC 57.546 39.130 0.00 0.00 0.00 2.93
1689 1800 6.018507 GGAAATGTGTTCTACAAAGTACGTGT 60.019 38.462 0.00 9.73 43.77 4.49
1690 1801 6.202188 AGGAAATGTGTTCTACAAAGTACGTG 59.798 38.462 0.00 0.00 43.77 4.49
1710 1821 4.111255 TGTCCATCAATTGGTCAGGAAA 57.889 40.909 5.42 0.00 46.52 3.13
1722 1837 5.014123 ACCTGGAAGAGTTATTGTCCATCAA 59.986 40.000 0.00 0.00 39.40 2.57
1820 1937 2.162608 CACACACTTAGAGAGACCGAGG 59.837 54.545 0.00 0.00 0.00 4.63
1867 1988 4.322877 CCATTTGTTCCATCCTGCAATTGA 60.323 41.667 10.34 0.00 0.00 2.57
1897 2018 6.097696 GGGCATAACTCAAGGCCTTATTTTTA 59.902 38.462 20.00 13.25 45.68 1.52
1958 2176 6.471146 AGTATGAGGCAATTAAGCATAGAGG 58.529 40.000 0.00 0.00 35.83 3.69
1994 2215 5.609423 CAATATTACAGGAGAAGCAGAGCT 58.391 41.667 0.00 0.00 42.56 4.09
2107 2338 3.754965 ACATCTACAGCTTTTTGCAGGA 58.245 40.909 0.00 0.00 45.94 3.86
2115 2346 4.532521 ACCTCTTGGTACATCTACAGCTTT 59.467 41.667 0.00 0.00 46.43 3.51
2158 2389 2.627945 CAATACGCTTCAAGCCCTACA 58.372 47.619 3.08 0.00 38.18 2.74
2164 2395 1.062525 CCGGCAATACGCTTCAAGC 59.937 57.895 0.00 0.00 41.91 4.01
2255 2576 4.175516 CCATTTCATGTTTCGACCATTGG 58.824 43.478 0.00 0.00 0.00 3.16
2264 2585 1.135112 GGGCGGACCATTTCATGTTTC 60.135 52.381 0.00 0.00 39.85 2.78
2394 2716 9.869844 CTGTAAATGCTATTTAGACAATACTGC 57.130 33.333 0.00 0.00 0.00 4.40
2615 2940 8.742554 AACATCGTTAGAACAAAAATCAATCC 57.257 30.769 0.00 0.00 0.00 3.01
2762 3099 6.510879 AATGAGATGGCATGTGCAATATAG 57.489 37.500 3.81 0.00 44.36 1.31
2962 3390 5.333798 CGACCTACAATACCACAACAACAAG 60.334 44.000 0.00 0.00 0.00 3.16
3053 3489 5.649782 AAGTTGAACAAATGCCTATCAGG 57.350 39.130 0.00 0.00 38.80 3.86
3122 3559 4.642953 GAACGATAAAGAGCTTCTGCAAC 58.357 43.478 0.00 0.00 42.74 4.17
3356 3794 2.285083 TCTGGTCGAATAAATTGCCGG 58.715 47.619 0.00 0.00 0.00 6.13
3495 3942 1.481871 AAATGCCAGCAATCCAGAGG 58.518 50.000 0.00 0.00 0.00 3.69
3529 3976 1.976132 ATCCCTGGAGTGGACGCATG 61.976 60.000 0.00 0.00 33.94 4.06
3642 4096 6.845302 TCAGCAACACAGAGCTTATAAATTG 58.155 36.000 0.00 0.00 39.50 2.32
3657 4111 6.149474 ACCATAACAGTAAATCTCAGCAACAC 59.851 38.462 0.00 0.00 0.00 3.32
3675 4130 3.462021 CTCCTTCTAGCAGCACCATAAC 58.538 50.000 0.00 0.00 0.00 1.89
3676 4131 2.435805 CCTCCTTCTAGCAGCACCATAA 59.564 50.000 0.00 0.00 0.00 1.90
3677 4132 2.042464 CCTCCTTCTAGCAGCACCATA 58.958 52.381 0.00 0.00 0.00 2.74
3678 4133 0.835941 CCTCCTTCTAGCAGCACCAT 59.164 55.000 0.00 0.00 0.00 3.55
3679 4134 1.267574 CCCTCCTTCTAGCAGCACCA 61.268 60.000 0.00 0.00 0.00 4.17
3680 4135 1.524482 CCCTCCTTCTAGCAGCACC 59.476 63.158 0.00 0.00 0.00 5.01
3681 4136 1.153269 GCCCTCCTTCTAGCAGCAC 60.153 63.158 0.00 0.00 0.00 4.40
3682 4137 2.725312 CGCCCTCCTTCTAGCAGCA 61.725 63.158 0.00 0.00 0.00 4.41
3683 4138 2.107953 CGCCCTCCTTCTAGCAGC 59.892 66.667 0.00 0.00 0.00 5.25
3684 4139 2.107953 GCGCCCTCCTTCTAGCAG 59.892 66.667 0.00 0.00 0.00 4.24
3685 4140 3.838271 CGCGCCCTCCTTCTAGCA 61.838 66.667 0.00 0.00 0.00 3.49
3686 4141 3.492311 CTCGCGCCCTCCTTCTAGC 62.492 68.421 0.00 0.00 0.00 3.42
3687 4142 1.791103 CTCTCGCGCCCTCCTTCTAG 61.791 65.000 0.00 0.00 0.00 2.43
3688 4143 1.824329 CTCTCGCGCCCTCCTTCTA 60.824 63.158 0.00 0.00 0.00 2.10
3689 4144 3.144193 CTCTCGCGCCCTCCTTCT 61.144 66.667 0.00 0.00 0.00 2.85
3690 4145 4.214327 CCTCTCGCGCCCTCCTTC 62.214 72.222 0.00 0.00 0.00 3.46
3733 4188 4.803908 CTTCCCTCTTGCCCGGCC 62.804 72.222 7.03 0.00 0.00 6.13
3734 4189 4.803908 CCTTCCCTCTTGCCCGGC 62.804 72.222 1.04 1.04 0.00 6.13
3735 4190 4.115199 CCCTTCCCTCTTGCCCGG 62.115 72.222 0.00 0.00 0.00 5.73
3736 4191 1.926426 AATCCCTTCCCTCTTGCCCG 61.926 60.000 0.00 0.00 0.00 6.13
3737 4192 0.336392 AAATCCCTTCCCTCTTGCCC 59.664 55.000 0.00 0.00 0.00 5.36
3738 4193 1.769026 GAAATCCCTTCCCTCTTGCC 58.231 55.000 0.00 0.00 0.00 4.52
3750 4205 6.782082 AGCAAGAATTAAGAAGGAAATCCC 57.218 37.500 0.00 0.00 36.42 3.85
3751 4206 8.526978 AGAAAGCAAGAATTAAGAAGGAAATCC 58.473 33.333 0.00 0.00 0.00 3.01
3752 4207 9.920133 AAGAAAGCAAGAATTAAGAAGGAAATC 57.080 29.630 0.00 0.00 0.00 2.17
3755 4210 9.793259 TCTAAGAAAGCAAGAATTAAGAAGGAA 57.207 29.630 0.00 0.00 0.00 3.36
3756 4211 9.965902 ATCTAAGAAAGCAAGAATTAAGAAGGA 57.034 29.630 0.00 0.00 0.00 3.36
3766 4221 9.896645 AGATGTATCAATCTAAGAAAGCAAGAA 57.103 29.630 0.00 0.00 35.09 2.52
3767 4222 9.539825 GAGATGTATCAATCTAAGAAAGCAAGA 57.460 33.333 0.00 0.00 37.03 3.02
3768 4223 8.772705 GGAGATGTATCAATCTAAGAAAGCAAG 58.227 37.037 0.00 0.00 37.03 4.01
3769 4224 8.489489 AGGAGATGTATCAATCTAAGAAAGCAA 58.511 33.333 0.00 0.00 37.03 3.91
3770 4225 8.027524 AGGAGATGTATCAATCTAAGAAAGCA 57.972 34.615 0.00 0.00 37.03 3.91
3771 4226 8.367156 AGAGGAGATGTATCAATCTAAGAAAGC 58.633 37.037 0.00 0.00 37.03 3.51
3772 4227 9.912634 GAGAGGAGATGTATCAATCTAAGAAAG 57.087 37.037 0.00 0.00 37.03 2.62
3773 4228 9.653516 AGAGAGGAGATGTATCAATCTAAGAAA 57.346 33.333 0.00 0.00 37.03 2.52
3774 4229 9.653516 AAGAGAGGAGATGTATCAATCTAAGAA 57.346 33.333 0.00 0.00 37.03 2.52
3775 4230 9.653516 AAAGAGAGGAGATGTATCAATCTAAGA 57.346 33.333 0.00 0.00 37.03 2.10
3776 4231 9.912634 GAAAGAGAGGAGATGTATCAATCTAAG 57.087 37.037 0.00 0.00 37.03 2.18
3777 4232 9.653516 AGAAAGAGAGGAGATGTATCAATCTAA 57.346 33.333 0.00 0.00 37.03 2.10
3779 4234 9.827198 ATAGAAAGAGAGGAGATGTATCAATCT 57.173 33.333 0.00 0.00 39.66 2.40
3783 4238 9.958180 CTCTATAGAAAGAGAGGAGATGTATCA 57.042 37.037 3.57 0.00 44.93 2.15
3795 4250 9.756571 AGTCAAGTAAACCTCTATAGAAAGAGA 57.243 33.333 3.57 0.00 44.93 3.10
3797 4252 8.968969 GGAGTCAAGTAAACCTCTATAGAAAGA 58.031 37.037 3.57 0.00 0.00 2.52
3798 4253 8.198778 GGGAGTCAAGTAAACCTCTATAGAAAG 58.801 40.741 3.57 1.04 0.00 2.62
3799 4254 7.676893 TGGGAGTCAAGTAAACCTCTATAGAAA 59.323 37.037 3.57 0.00 0.00 2.52
3800 4255 7.186972 TGGGAGTCAAGTAAACCTCTATAGAA 58.813 38.462 3.57 0.00 0.00 2.10
3801 4256 6.738635 TGGGAGTCAAGTAAACCTCTATAGA 58.261 40.000 1.69 1.69 0.00 1.98
3802 4257 7.419711 TTGGGAGTCAAGTAAACCTCTATAG 57.580 40.000 0.00 0.00 0.00 1.31
3803 4258 7.419711 CTTGGGAGTCAAGTAAACCTCTATA 57.580 40.000 0.00 0.00 45.81 1.31
3804 4259 6.301169 CTTGGGAGTCAAGTAAACCTCTAT 57.699 41.667 0.00 0.00 45.81 1.98
3805 4260 5.740290 CTTGGGAGTCAAGTAAACCTCTA 57.260 43.478 0.00 0.00 45.81 2.43
3806 4261 4.625607 CTTGGGAGTCAAGTAAACCTCT 57.374 45.455 0.00 0.00 45.81 3.69
3816 4271 1.846261 AGCCTTGCTTGGGAGTCAA 59.154 52.632 0.00 0.00 33.89 3.18
3817 4272 3.580084 AGCCTTGCTTGGGAGTCA 58.420 55.556 0.00 0.00 33.89 3.41
3829 4284 2.026169 GCTTAGGGGTCAAGTAAGCCTT 60.026 50.000 2.53 0.00 41.83 4.35
3830 4285 1.560146 GCTTAGGGGTCAAGTAAGCCT 59.440 52.381 2.53 0.00 41.83 4.58
3831 4286 1.280998 TGCTTAGGGGTCAAGTAAGCC 59.719 52.381 10.06 0.00 45.37 4.35
3832 4287 2.781681 TGCTTAGGGGTCAAGTAAGC 57.218 50.000 6.41 6.41 45.90 3.09
3833 4288 3.010420 GCTTGCTTAGGGGTCAAGTAAG 58.990 50.000 8.11 8.11 44.06 2.34
3834 4289 2.614481 CGCTTGCTTAGGGGTCAAGTAA 60.614 50.000 0.00 0.00 39.36 2.24
3835 4290 1.066430 CGCTTGCTTAGGGGTCAAGTA 60.066 52.381 0.00 0.00 39.36 2.24
3836 4291 0.321653 CGCTTGCTTAGGGGTCAAGT 60.322 55.000 0.00 0.00 39.36 3.16
3837 4292 0.036388 TCGCTTGCTTAGGGGTCAAG 60.036 55.000 0.00 0.00 39.95 3.02
3838 4293 0.321298 GTCGCTTGCTTAGGGGTCAA 60.321 55.000 4.21 0.00 37.41 3.18
3839 4294 1.295423 GTCGCTTGCTTAGGGGTCA 59.705 57.895 4.21 0.00 37.41 4.02
3840 4295 1.449778 GGTCGCTTGCTTAGGGGTC 60.450 63.158 4.21 0.00 37.41 4.46
3841 4296 2.669240 GGTCGCTTGCTTAGGGGT 59.331 61.111 4.21 0.00 37.41 4.95
3842 4297 2.124695 GGGTCGCTTGCTTAGGGG 60.125 66.667 4.21 0.00 37.41 4.79
3843 4298 0.539986 TAAGGGTCGCTTGCTTAGGG 59.460 55.000 12.19 0.00 38.13 3.53
3844 4299 2.622064 ATAAGGGTCGCTTGCTTAGG 57.378 50.000 12.19 0.00 0.00 2.69
3845 4300 5.140747 AGATATAAGGGTCGCTTGCTTAG 57.859 43.478 12.19 0.00 0.00 2.18
3846 4301 6.659745 TTAGATATAAGGGTCGCTTGCTTA 57.340 37.500 12.19 2.61 0.00 3.09
3847 4302 5.546621 TTAGATATAAGGGTCGCTTGCTT 57.453 39.130 12.19 0.55 0.00 3.91
3848 4303 5.746990 ATTAGATATAAGGGTCGCTTGCT 57.253 39.130 12.19 6.83 0.00 3.91
3849 4304 7.148457 GGTTAATTAGATATAAGGGTCGCTTGC 60.148 40.741 12.19 0.09 0.00 4.01
3850 4305 7.333672 GGGTTAATTAGATATAAGGGTCGCTTG 59.666 40.741 12.19 0.00 0.00 4.01
3851 4306 7.237055 AGGGTTAATTAGATATAAGGGTCGCTT 59.763 37.037 7.38 7.38 0.00 4.68
3852 4307 6.729569 AGGGTTAATTAGATATAAGGGTCGCT 59.270 38.462 0.00 0.00 0.00 4.93
3853 4308 6.944096 AGGGTTAATTAGATATAAGGGTCGC 58.056 40.000 0.00 0.00 0.00 5.19
3863 4318 9.866655 TCCGTTAGTCTTAGGGTTAATTAGATA 57.133 33.333 0.00 0.00 0.00 1.98
3864 4319 8.637099 GTCCGTTAGTCTTAGGGTTAATTAGAT 58.363 37.037 0.00 0.00 0.00 1.98
3865 4320 7.068716 GGTCCGTTAGTCTTAGGGTTAATTAGA 59.931 40.741 0.00 0.00 0.00 2.10
3866 4321 7.205992 GGTCCGTTAGTCTTAGGGTTAATTAG 58.794 42.308 0.00 0.00 0.00 1.73
3867 4322 6.098266 GGGTCCGTTAGTCTTAGGGTTAATTA 59.902 42.308 0.00 0.00 0.00 1.40
3868 4323 5.104776 GGGTCCGTTAGTCTTAGGGTTAATT 60.105 44.000 0.00 0.00 0.00 1.40
3869 4324 4.406972 GGGTCCGTTAGTCTTAGGGTTAAT 59.593 45.833 0.00 0.00 0.00 1.40
3870 4325 3.769300 GGGTCCGTTAGTCTTAGGGTTAA 59.231 47.826 0.00 0.00 0.00 2.01
3871 4326 3.245586 TGGGTCCGTTAGTCTTAGGGTTA 60.246 47.826 0.00 0.00 0.00 2.85
3872 4327 2.182827 GGGTCCGTTAGTCTTAGGGTT 58.817 52.381 0.00 0.00 0.00 4.11
3873 4328 1.077663 TGGGTCCGTTAGTCTTAGGGT 59.922 52.381 0.00 0.00 0.00 4.34
3874 4329 1.856629 TGGGTCCGTTAGTCTTAGGG 58.143 55.000 0.00 0.00 0.00 3.53
3875 4330 4.038883 CCTAATGGGTCCGTTAGTCTTAGG 59.961 50.000 21.08 9.10 41.48 2.69
3876 4331 4.501058 GCCTAATGGGTCCGTTAGTCTTAG 60.501 50.000 21.08 10.91 41.48 2.18
3877 4332 3.385755 GCCTAATGGGTCCGTTAGTCTTA 59.614 47.826 21.08 0.00 41.48 2.10
3878 4333 2.169978 GCCTAATGGGTCCGTTAGTCTT 59.830 50.000 21.08 0.00 41.48 3.01
3879 4334 1.761198 GCCTAATGGGTCCGTTAGTCT 59.239 52.381 21.08 0.00 41.48 3.24
3880 4335 1.202615 GGCCTAATGGGTCCGTTAGTC 60.203 57.143 21.08 12.70 41.48 2.59
3881 4336 0.835276 GGCCTAATGGGTCCGTTAGT 59.165 55.000 21.08 0.00 41.48 2.24
3882 4337 3.700198 GGCCTAATGGGTCCGTTAG 57.300 57.895 17.74 17.74 42.25 2.34
3888 4343 1.142262 ACGTAATGGGCCTAATGGGTC 59.858 52.381 4.53 0.00 39.42 4.46
3889 4344 1.218844 ACGTAATGGGCCTAATGGGT 58.781 50.000 4.53 0.00 37.43 4.51
3890 4345 2.370849 AGTACGTAATGGGCCTAATGGG 59.629 50.000 4.53 0.00 38.36 4.00
3891 4346 3.323979 AGAGTACGTAATGGGCCTAATGG 59.676 47.826 4.53 0.00 0.00 3.16
3892 4347 4.602340 AGAGTACGTAATGGGCCTAATG 57.398 45.455 4.53 0.00 0.00 1.90
3893 4348 4.771054 CCTAGAGTACGTAATGGGCCTAAT 59.229 45.833 4.53 0.00 0.00 1.73
3894 4349 4.147321 CCTAGAGTACGTAATGGGCCTAA 58.853 47.826 4.53 0.00 0.00 2.69
3895 4350 3.139025 ACCTAGAGTACGTAATGGGCCTA 59.861 47.826 4.53 0.00 0.00 3.93
3896 4351 2.091444 ACCTAGAGTACGTAATGGGCCT 60.091 50.000 4.53 0.00 0.00 5.19
3897 4352 2.035576 CACCTAGAGTACGTAATGGGCC 59.964 54.545 0.00 0.00 0.00 5.80
3898 4353 2.545322 GCACCTAGAGTACGTAATGGGC 60.545 54.545 0.00 0.00 0.00 5.36
3899 4354 2.957006 AGCACCTAGAGTACGTAATGGG 59.043 50.000 0.00 2.40 0.00 4.00
3900 4355 3.795826 GCAGCACCTAGAGTACGTAATGG 60.796 52.174 0.00 0.00 0.00 3.16
3901 4356 3.066900 AGCAGCACCTAGAGTACGTAATG 59.933 47.826 0.00 0.00 0.00 1.90
3902 4357 3.288964 AGCAGCACCTAGAGTACGTAAT 58.711 45.455 0.00 0.00 0.00 1.89
3903 4358 2.719739 AGCAGCACCTAGAGTACGTAA 58.280 47.619 0.00 0.00 0.00 3.18
3904 4359 2.414994 AGCAGCACCTAGAGTACGTA 57.585 50.000 0.00 0.00 0.00 3.57
3905 4360 2.093075 TCTAGCAGCACCTAGAGTACGT 60.093 50.000 8.73 0.00 39.01 3.57
3906 4361 2.562635 TCTAGCAGCACCTAGAGTACG 58.437 52.381 8.73 0.00 39.01 3.67
3907 4362 3.316868 CCTTCTAGCAGCACCTAGAGTAC 59.683 52.174 11.61 0.00 43.28 2.73
3908 4363 3.202373 TCCTTCTAGCAGCACCTAGAGTA 59.798 47.826 11.61 1.11 43.28 2.59
3909 4364 2.024846 TCCTTCTAGCAGCACCTAGAGT 60.025 50.000 11.61 0.00 43.28 3.24
3910 4365 2.622942 CTCCTTCTAGCAGCACCTAGAG 59.377 54.545 11.61 7.71 43.28 2.43
3911 4366 2.660572 CTCCTTCTAGCAGCACCTAGA 58.339 52.381 8.73 8.73 41.42 2.43
3912 4367 1.686052 CCTCCTTCTAGCAGCACCTAG 59.314 57.143 0.00 4.73 36.88 3.02
3913 4368 1.689575 CCCTCCTTCTAGCAGCACCTA 60.690 57.143 0.00 0.00 0.00 3.08
3914 4369 0.980231 CCCTCCTTCTAGCAGCACCT 60.980 60.000 0.00 0.00 0.00 4.00
3917 4372 2.725312 CGCCCTCCTTCTAGCAGCA 61.725 63.158 0.00 0.00 0.00 4.41
3967 4657 3.984193 CTTCCCTCTTGCCCAGCCG 62.984 68.421 0.00 0.00 0.00 5.52
3968 4658 2.044551 CTTCCCTCTTGCCCAGCC 60.045 66.667 0.00 0.00 0.00 4.85
3969 4659 2.044551 CCTTCCCTCTTGCCCAGC 60.045 66.667 0.00 0.00 0.00 4.85
3970 4660 1.284841 ATCCCTTCCCTCTTGCCCAG 61.285 60.000 0.00 0.00 0.00 4.45
3971 4661 0.850883 AATCCCTTCCCTCTTGCCCA 60.851 55.000 0.00 0.00 0.00 5.36
3972 4662 0.336392 AAATCCCTTCCCTCTTGCCC 59.664 55.000 0.00 0.00 0.00 5.36
3973 4663 1.769026 GAAATCCCTTCCCTCTTGCC 58.231 55.000 0.00 0.00 0.00 4.52
3985 4675 6.782082 AGCAAGAATTAAGAAGGAAATCCC 57.218 37.500 0.00 0.00 36.42 3.85
3986 4676 8.526978 AGAAAGCAAGAATTAAGAAGGAAATCC 58.473 33.333 0.00 0.00 0.00 3.01
3987 4677 9.920133 AAGAAAGCAAGAATTAAGAAGGAAATC 57.080 29.630 0.00 0.00 0.00 2.17
3990 4680 9.793259 TCTAAGAAAGCAAGAATTAAGAAGGAA 57.207 29.630 0.00 0.00 0.00 3.36
3991 4681 9.965902 ATCTAAGAAAGCAAGAATTAAGAAGGA 57.034 29.630 0.00 0.00 0.00 3.36
4001 4691 9.896645 AGATGTATCAATCTAAGAAAGCAAGAA 57.103 29.630 0.00 0.00 35.09 2.52
4002 4692 9.539825 GAGATGTATCAATCTAAGAAAGCAAGA 57.460 33.333 0.00 0.00 37.03 3.02
4003 4693 8.772705 GGAGATGTATCAATCTAAGAAAGCAAG 58.227 37.037 0.00 0.00 37.03 4.01
4004 4694 8.489489 AGGAGATGTATCAATCTAAGAAAGCAA 58.511 33.333 0.00 0.00 37.03 3.91
4005 4695 8.027524 AGGAGATGTATCAATCTAAGAAAGCA 57.972 34.615 0.00 0.00 37.03 3.91
4006 4696 8.367156 AGAGGAGATGTATCAATCTAAGAAAGC 58.633 37.037 0.00 0.00 37.03 3.51
4007 4697 9.912634 GAGAGGAGATGTATCAATCTAAGAAAG 57.087 37.037 0.00 0.00 37.03 2.62
4008 4698 9.653516 AGAGAGGAGATGTATCAATCTAAGAAA 57.346 33.333 0.00 0.00 37.03 2.52
4009 4699 9.653516 AAGAGAGGAGATGTATCAATCTAAGAA 57.346 33.333 0.00 0.00 37.03 2.52
4010 4700 9.653516 AAAGAGAGGAGATGTATCAATCTAAGA 57.346 33.333 0.00 0.00 37.03 2.10
4126 4820 1.218844 ACGTAATGGGCCTAATGGGT 58.781 50.000 4.53 0.00 37.43 4.51
4493 5201 1.912763 GGGCATGCTGTTTTCCCCA 60.913 57.895 18.92 0.00 32.71 4.96
4619 5327 4.760047 GGCGTGTGCGGGAGATGT 62.760 66.667 0.00 0.00 44.10 3.06
4694 5402 0.395311 TCCGTCTTGGATCGCTACCT 60.395 55.000 0.00 0.00 43.74 3.08
4728 5436 2.989639 CAGATCAAGTCCCCGCCA 59.010 61.111 0.00 0.00 0.00 5.69
5099 5846 1.536907 TTCTTGGCCGGGTCCTACA 60.537 57.895 2.18 0.00 0.00 2.74
5234 6012 1.833492 TCCCTTCCCACGAACGTCA 60.833 57.895 0.00 0.00 0.00 4.35
5239 6017 3.315949 CCCGTCCCTTCCCACGAA 61.316 66.667 0.00 0.00 38.32 3.85
5314 6101 2.725312 CGCCCTCCTTCTAGCAGCA 61.725 63.158 0.00 0.00 0.00 4.41
5523 6314 1.218844 ACGTAATGGGCCTAATGGGT 58.781 50.000 4.53 0.00 37.43 4.51
5615 6415 8.146053 TGAGGAACAGATTAAATCTTACCTCA 57.854 34.615 17.82 17.82 46.18 3.86
5700 6500 9.889128 TCTTTTCCAAATTTGATCAAGAAGTTT 57.111 25.926 19.86 6.36 0.00 2.66
5703 6503 9.485206 ACATCTTTTCCAAATTTGATCAAGAAG 57.515 29.630 19.86 18.38 0.00 2.85
5750 6550 4.398988 CCTTCAACAAATCATCGGATCCAA 59.601 41.667 13.41 0.00 31.88 3.53
5930 6730 3.406764 AGCAAAGAATCACCACAGAGAC 58.593 45.455 0.00 0.00 0.00 3.36
5959 6761 8.016801 CCAGTCCAAATGCAAAATTACAATTTC 58.983 33.333 0.00 0.00 37.62 2.17
5963 6765 6.166984 TCCAGTCCAAATGCAAAATTACAA 57.833 33.333 0.00 0.00 0.00 2.41
5966 6768 7.670009 CATTTCCAGTCCAAATGCAAAATTA 57.330 32.000 0.00 0.00 35.12 1.40
5994 6796 8.554870 TGGAAGACTACTATTACTCAGGTTCTA 58.445 37.037 0.00 0.00 0.00 2.10
6171 7099 1.081094 CACCGCTAAGTTAAACCCCG 58.919 55.000 0.00 0.00 0.00 5.73
6180 7108 1.664321 CTACCTCGGCACCGCTAAGT 61.664 60.000 3.66 1.60 39.59 2.24
6198 7126 7.127955 ACAGGGTGTCAATAGAGAAAATATCCT 59.872 37.037 0.00 0.00 0.00 3.24
6204 7132 8.141909 CGATATACAGGGTGTCAATAGAGAAAA 58.858 37.037 0.00 0.00 0.00 2.29
6225 7153 6.753180 AGTAATGACAGATTGACAGCGATAT 58.247 36.000 0.00 0.00 0.00 1.63
6231 7159 7.008719 CAGTAACGAGTAATGACAGATTGACAG 59.991 40.741 0.00 0.00 28.85 3.51
6232 7160 6.806739 CAGTAACGAGTAATGACAGATTGACA 59.193 38.462 0.00 0.00 28.85 3.58
6233 7161 7.027760 TCAGTAACGAGTAATGACAGATTGAC 58.972 38.462 0.00 0.00 31.99 3.18
6234 7162 7.153217 TCAGTAACGAGTAATGACAGATTGA 57.847 36.000 0.00 0.00 31.99 2.57
6235 7163 6.473778 CCTCAGTAACGAGTAATGACAGATTG 59.526 42.308 0.00 0.00 31.99 2.67
6236 7164 6.153000 ACCTCAGTAACGAGTAATGACAGATT 59.847 38.462 0.00 0.00 31.99 2.40
6237 7165 5.652891 ACCTCAGTAACGAGTAATGACAGAT 59.347 40.000 0.00 0.00 31.99 2.90
6238 7166 5.008331 ACCTCAGTAACGAGTAATGACAGA 58.992 41.667 0.00 0.00 31.99 3.41
6267 7275 4.768130 TGAAAAACACACGGAGAACAAA 57.232 36.364 0.00 0.00 0.00 2.83
6283 7291 4.038282 AGCATGCTGTGTGAATCTTGAAAA 59.962 37.500 21.98 0.00 0.00 2.29
6321 7329 7.876936 ATGATGCTACAACTTGAAGAATCAT 57.123 32.000 0.00 0.10 34.96 2.45
6335 7343 5.508994 CGTACAATGTCCCTATGATGCTACA 60.509 44.000 0.00 0.00 0.00 2.74
6338 7346 3.803715 GCGTACAATGTCCCTATGATGCT 60.804 47.826 0.00 0.00 0.00 3.79
6352 7360 8.942338 TGTATCTAAAAATCTGAGCGTACAAT 57.058 30.769 0.00 0.00 0.00 2.71
6360 7368 7.044181 TGCTGACCTGTATCTAAAAATCTGAG 58.956 38.462 0.00 0.00 0.00 3.35
6370 7378 7.182817 ACTTTACAATGCTGACCTGTATCTA 57.817 36.000 0.00 0.00 0.00 1.98
6378 7386 8.263940 TCAGTTAATACTTTACAATGCTGACC 57.736 34.615 0.00 0.00 30.26 4.02
6422 7430 4.953868 TGTCACCGTTGGCCGTCG 62.954 66.667 11.60 11.60 33.66 5.12
6433 7441 0.179000 CCATAGCTCCAGGTGTCACC 59.821 60.000 14.68 14.68 38.99 4.02
6450 7458 2.690497 GAGCTCATAGAGTAGCACACCA 59.310 50.000 9.40 0.00 41.32 4.17
6453 7461 4.210331 TGATGAGCTCATAGAGTAGCACA 58.790 43.478 28.78 15.85 42.22 4.57
6459 7467 2.302445 GCCCATGATGAGCTCATAGAGT 59.698 50.000 28.78 7.96 42.91 3.24
6507 7535 1.649321 ACACCTTCTGCTCATCCTCA 58.351 50.000 0.00 0.00 0.00 3.86
6513 7541 1.131638 AGTCCAACACCTTCTGCTCA 58.868 50.000 0.00 0.00 0.00 4.26
6526 7554 2.829384 GCCCAGTGACCCAGTCCAA 61.829 63.158 0.00 0.00 0.00 3.53
6536 7564 1.746861 CGATATGCCTTTGCCCAGTGA 60.747 52.381 0.00 0.00 36.33 3.41
6537 7565 0.664761 CGATATGCCTTTGCCCAGTG 59.335 55.000 0.00 0.00 36.33 3.66
6539 7567 0.947244 GACGATATGCCTTTGCCCAG 59.053 55.000 0.00 0.00 36.33 4.45
6540 7568 0.254462 TGACGATATGCCTTTGCCCA 59.746 50.000 0.00 0.00 36.33 5.36
6543 7571 1.331756 CACCTGACGATATGCCTTTGC 59.668 52.381 0.00 0.00 38.26 3.68
6544 7572 2.632377 ACACCTGACGATATGCCTTTG 58.368 47.619 0.00 0.00 0.00 2.77
6546 7574 2.236146 TCAACACCTGACGATATGCCTT 59.764 45.455 0.00 0.00 0.00 4.35
6547 7575 1.831106 TCAACACCTGACGATATGCCT 59.169 47.619 0.00 0.00 0.00 4.75
6552 7580 5.451937 GGATTCAGATCAACACCTGACGATA 60.452 44.000 0.00 0.00 38.95 2.92
6553 7581 3.961480 TTCAGATCAACACCTGACGAT 57.039 42.857 0.00 0.00 38.95 3.73
6554 7582 3.368427 GGATTCAGATCAACACCTGACGA 60.368 47.826 0.00 0.00 38.95 4.20
6555 7583 2.932614 GGATTCAGATCAACACCTGACG 59.067 50.000 0.00 0.00 38.95 4.35
6556 7584 4.213564 AGGATTCAGATCAACACCTGAC 57.786 45.455 0.00 0.00 38.95 3.51
6557 7585 5.026121 ACTAGGATTCAGATCAACACCTGA 58.974 41.667 0.00 0.00 37.61 3.86
6558 7586 5.350504 ACTAGGATTCAGATCAACACCTG 57.649 43.478 0.00 0.00 33.77 4.00
6583 7611 9.277783 GATTCAGTTATATGTAAGCACCTCAAT 57.722 33.333 0.00 0.00 0.00 2.57
6584 7612 7.715249 GGATTCAGTTATATGTAAGCACCTCAA 59.285 37.037 0.00 0.00 0.00 3.02
6585 7613 7.071196 AGGATTCAGTTATATGTAAGCACCTCA 59.929 37.037 0.00 0.00 0.00 3.86
6586 7614 7.445945 AGGATTCAGTTATATGTAAGCACCTC 58.554 38.462 0.00 0.00 0.00 3.85
6587 7615 7.380423 AGGATTCAGTTATATGTAAGCACCT 57.620 36.000 0.00 0.00 0.00 4.00
6589 7617 8.438676 ACAAGGATTCAGTTATATGTAAGCAC 57.561 34.615 0.00 0.00 0.00 4.40
6590 7618 9.461312 AAACAAGGATTCAGTTATATGTAAGCA 57.539 29.630 0.00 0.00 0.00 3.91
6776 8269 4.882671 AAATGTACAGATGCCGATTCAC 57.117 40.909 0.33 0.00 0.00 3.18
6871 8369 9.429359 TGTTCACATGTTTCTAAAAATGTTTGT 57.571 25.926 8.26 0.00 42.67 2.83
6981 8493 8.349245 CCGTAGAAAATATTCATGGCATTGTTA 58.651 33.333 0.00 0.00 38.06 2.41
6986 8498 7.581213 TTTCCGTAGAAAATATTCATGGCAT 57.419 32.000 0.00 0.00 39.05 4.40
6996 8508 7.972832 AGTGTTCACATTTCCGTAGAAAATA 57.027 32.000 5.74 0.00 44.91 1.40
7005 8517 7.433719 TCACATTTTAAAGTGTTCACATTTCCG 59.566 33.333 13.15 0.03 37.07 4.30
7006 8518 8.641499 TCACATTTTAAAGTGTTCACATTTCC 57.359 30.769 13.15 0.00 37.07 3.13
7060 8573 1.859302 ATAGCATTCCCCCGCAAAAA 58.141 45.000 0.00 0.00 0.00 1.94
7061 8574 2.691011 GTTATAGCATTCCCCCGCAAAA 59.309 45.455 0.00 0.00 0.00 2.44
7062 8575 2.303175 GTTATAGCATTCCCCCGCAAA 58.697 47.619 0.00 0.00 0.00 3.68
7063 8576 1.213182 TGTTATAGCATTCCCCCGCAA 59.787 47.619 0.00 0.00 0.00 4.85
7064 8577 0.840617 TGTTATAGCATTCCCCCGCA 59.159 50.000 0.00 0.00 0.00 5.69
7065 8578 2.200373 ATGTTATAGCATTCCCCCGC 57.800 50.000 0.00 0.00 0.00 6.13
7066 8579 4.827284 AGAAAATGTTATAGCATTCCCCCG 59.173 41.667 14.30 0.00 38.03 5.73
7067 8580 7.833285 TTAGAAAATGTTATAGCATTCCCCC 57.167 36.000 14.30 5.53 38.03 5.40
7068 8581 9.750125 CTTTTAGAAAATGTTATAGCATTCCCC 57.250 33.333 14.30 7.55 38.03 4.81
7102 8615 7.238486 TGTTCATGCAGGGTTATAAAAATGT 57.762 32.000 0.00 0.00 0.00 2.71
7110 8623 5.245751 TCACAAAATGTTCATGCAGGGTTAT 59.754 36.000 0.00 0.00 0.00 1.89
7115 8628 4.992319 ACATTCACAAAATGTTCATGCAGG 59.008 37.500 0.00 0.00 37.58 4.85
7136 8649 6.320164 ACTTTATGTAAAAGGTTCACTGCACA 59.680 34.615 2.86 0.00 0.00 4.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.