Multiple sequence alignment - TraesCS3B01G535400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G535400 chr3B 100.000 4831 0 0 1 4831 775479579 775474749 0.000000e+00 8922
1 TraesCS3B01G535400 chr3B 87.541 305 20 4 1 288 101318495 101318192 2.150000e-88 337
2 TraesCS3B01G535400 chr3D 93.987 2212 90 15 664 2864 580334356 580332177 0.000000e+00 3308
3 TraesCS3B01G535400 chr3D 96.575 876 20 5 2860 3727 580331981 580331108 0.000000e+00 1443
4 TraesCS3B01G535400 chr3D 87.863 758 62 15 3938 4671 580330582 580329831 0.000000e+00 863
5 TraesCS3B01G535400 chr3D 91.244 217 19 0 3724 3940 580330949 580330733 3.660000e-76 296
6 TraesCS3B01G535400 chr3D 96.970 66 2 0 4764 4829 580327641 580327576 1.420000e-20 111
7 TraesCS3B01G535400 chr3A 84.710 1053 105 27 3077 4090 715646475 715645440 0.000000e+00 1002
8 TraesCS3B01G535400 chr3A 92.228 386 19 4 1 384 662882858 662883234 1.980000e-148 536
9 TraesCS3B01G535400 chr3A 91.969 386 19 6 1 384 647361813 647361438 9.210000e-147 531
10 TraesCS3B01G535400 chr3A 91.040 346 31 0 2140 2485 715647524 715647179 7.320000e-128 468
11 TraesCS3B01G535400 chr3A 89.423 312 26 5 1459 1766 715648176 715647868 2.110000e-103 387
12 TraesCS3B01G535400 chr2D 88.158 760 72 7 3074 3832 60791521 60790779 0.000000e+00 889
13 TraesCS3B01G535400 chr2D 84.633 436 42 12 2180 2597 60792024 60791596 1.250000e-110 411
14 TraesCS3B01G535400 chr2D 79.000 300 47 10 1574 1868 60793018 60792730 1.770000e-44 191
15 TraesCS3B01G535400 chr2A 87.763 760 75 7 3074 3832 61384933 61384191 0.000000e+00 872
16 TraesCS3B01G535400 chr2A 83.991 431 48 10 2180 2594 61385436 61385011 1.260000e-105 394
17 TraesCS3B01G535400 chr2A 93.048 187 11 1 1 185 427513815 427513629 6.160000e-69 272
18 TraesCS3B01G535400 chr2B 86.974 760 81 7 3074 3832 95543231 95542489 0.000000e+00 839
19 TraesCS3B01G535400 chr2B 84.101 434 48 9 2180 2597 95543734 95543306 2.710000e-107 399
20 TraesCS3B01G535400 chr2B 79.389 393 47 18 1484 1868 95544810 95544444 3.730000e-61 246
21 TraesCS3B01G535400 chr2B 91.870 123 4 6 264 384 799981927 799982045 2.990000e-37 167
22 TraesCS3B01G535400 chr2B 91.919 99 2 1 2983 3075 357211582 357211484 3.030000e-27 134
23 TraesCS3B01G535400 chr2B 91.837 98 3 1 2983 3075 3672091 3672188 1.090000e-26 132
24 TraesCS3B01G535400 chr2B 91.837 98 3 1 2983 3075 3700346 3700443 1.090000e-26 132
25 TraesCS3B01G535400 chr5D 90.956 387 17 6 1 384 548204074 548203703 5.580000e-139 505
26 TraesCS3B01G535400 chr5D 90.612 245 9 2 149 393 425665090 425664860 3.630000e-81 313
27 TraesCS3B01G535400 chr7D 89.691 388 14 13 1 384 500906283 500906648 5.660000e-129 472
28 TraesCS3B01G535400 chr7A 86.563 387 21 11 1 384 686149565 686149923 9.740000e-107 398
29 TraesCS3B01G535400 chr4A 89.420 293 21 8 1 291 738598245 738598529 1.280000e-95 361
30 TraesCS3B01G535400 chr4A 77.374 358 53 14 1484 1836 534200326 534200660 2.300000e-43 187
31 TraesCS3B01G535400 chr4D 95.434 219 8 1 1 217 418535608 418535826 9.950000e-92 348
32 TraesCS3B01G535400 chr7B 91.803 122 6 4 264 384 228809842 228809724 2.990000e-37 167
33 TraesCS3B01G535400 chr7B 91.057 123 7 4 264 384 651498107 651497987 3.870000e-36 163
34 TraesCS3B01G535400 chr7B 91.919 99 2 1 2983 3075 742975604 742975506 3.030000e-27 134
35 TraesCS3B01G535400 chr6B 92.373 118 7 2 267 384 33959883 33959998 2.990000e-37 167
36 TraesCS3B01G535400 chr5B 91.870 123 5 5 264 384 629143449 629143568 2.990000e-37 167
37 TraesCS3B01G535400 chr5B 90.909 121 10 1 264 384 689196909 689197028 1.390000e-35 161
38 TraesCS3B01G535400 chr4B 91.057 123 5 6 264 384 429435477 429435595 1.390000e-35 161
39 TraesCS3B01G535400 chrUn 90.909 99 3 1 2983 3075 86491177 86491275 1.410000e-25 128
40 TraesCS3B01G535400 chrUn 90.909 99 3 1 2983 3075 186178287 186178189 1.410000e-25 128
41 TraesCS3B01G535400 chr6D 90.909 99 3 1 2983 3075 277313349 277313251 1.410000e-25 128
42 TraesCS3B01G535400 chr1D 90.909 99 3 1 2983 3075 350988821 350988723 1.410000e-25 128


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G535400 chr3B 775474749 775479579 4830 True 8922.000000 8922 100.000000 1 4831 1 chr3B.!!$R2 4830
1 TraesCS3B01G535400 chr3D 580327576 580334356 6780 True 1204.200000 3308 93.327800 664 4829 5 chr3D.!!$R1 4165
2 TraesCS3B01G535400 chr3A 715645440 715648176 2736 True 619.000000 1002 88.391000 1459 4090 3 chr3A.!!$R2 2631
3 TraesCS3B01G535400 chr2D 60790779 60793018 2239 True 497.000000 889 83.930333 1574 3832 3 chr2D.!!$R1 2258
4 TraesCS3B01G535400 chr2A 61384191 61385436 1245 True 633.000000 872 85.877000 2180 3832 2 chr2A.!!$R2 1652
5 TraesCS3B01G535400 chr2B 95542489 95544810 2321 True 494.666667 839 83.488000 1484 3832 3 chr2B.!!$R2 2348

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
504 505 0.039256 GCAGTGAGCCATTTTCGCAA 60.039 50.0 0.00 0.0 37.23 4.85 F
523 524 0.104934 ACCTGTGGTGGGAGAGAACT 60.105 55.0 0.00 0.0 32.98 3.01 F
595 596 0.252197 ATCGCCCGAAAGCCTAACTT 59.748 50.0 0.00 0.0 41.70 2.66 F
1925 1969 0.324943 CTCGTCCAATTGGGGTGTCT 59.675 55.0 24.29 0.0 37.22 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1364 1374 0.036010 GCTACTTCTGGCTGCTGGAA 60.036 55.000 0.00 3.82 0.00 3.53 R
2128 2661 1.156736 GCCTGCGTCTGTTTGTACAT 58.843 50.000 0.00 0.00 32.86 2.29 R
2481 3065 2.227194 AGAAACGCCCTGGTTAAAGTG 58.773 47.619 0.00 0.00 0.00 3.16 R
3872 4923 1.071385 AGTACTGCTTGCTCAGTTGCT 59.929 47.619 11.01 8.05 44.26 3.91 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.473520 CGGCACCTGTAGGGCTGG 62.474 72.222 2.53 0.00 40.27 4.85
44 45 3.838271 GGAGGAGCGGATGTGCGA 61.838 66.667 0.00 0.00 40.67 5.10
45 46 2.279120 GAGGAGCGGATGTGCGAG 60.279 66.667 0.00 0.00 40.67 5.03
46 47 3.781770 GAGGAGCGGATGTGCGAGG 62.782 68.421 0.00 0.00 40.67 4.63
47 48 3.838271 GGAGCGGATGTGCGAGGA 61.838 66.667 0.00 0.00 40.67 3.71
48 49 2.583593 GAGCGGATGTGCGAGGAC 60.584 66.667 0.00 0.00 40.67 3.85
49 50 4.148825 AGCGGATGTGCGAGGACC 62.149 66.667 0.00 0.00 40.67 4.46
51 52 4.873129 CGGATGTGCGAGGACCGG 62.873 72.222 0.00 0.00 39.92 5.28
52 53 3.458163 GGATGTGCGAGGACCGGA 61.458 66.667 9.46 0.00 39.04 5.14
53 54 2.105128 GATGTGCGAGGACCGGAG 59.895 66.667 9.46 0.00 39.91 4.63
54 55 2.362503 ATGTGCGAGGACCGGAGA 60.363 61.111 9.46 0.00 39.91 3.71
55 56 1.945354 GATGTGCGAGGACCGGAGAA 61.945 60.000 9.46 0.00 39.91 2.87
56 57 1.949847 ATGTGCGAGGACCGGAGAAG 61.950 60.000 9.46 0.00 39.91 2.85
57 58 3.068691 TGCGAGGACCGGAGAAGG 61.069 66.667 9.46 0.00 39.04 3.46
59 60 2.885861 CGAGGACCGGAGAAGGTG 59.114 66.667 9.46 0.00 46.09 4.00
60 61 2.711922 CGAGGACCGGAGAAGGTGG 61.712 68.421 9.46 0.00 46.09 4.61
61 62 2.284699 AGGACCGGAGAAGGTGGG 60.285 66.667 9.46 0.00 46.09 4.61
62 63 3.400054 GGACCGGAGAAGGTGGGG 61.400 72.222 9.46 0.00 46.09 4.96
63 64 2.284405 GACCGGAGAAGGTGGGGA 60.284 66.667 9.46 0.00 46.09 4.81
64 65 1.916777 GACCGGAGAAGGTGGGGAA 60.917 63.158 9.46 0.00 46.09 3.97
65 66 1.229853 ACCGGAGAAGGTGGGGAAT 60.230 57.895 9.46 0.00 44.07 3.01
66 67 1.224592 CCGGAGAAGGTGGGGAATG 59.775 63.158 0.00 0.00 0.00 2.67
67 68 1.224592 CGGAGAAGGTGGGGAATGG 59.775 63.158 0.00 0.00 0.00 3.16
68 69 1.615262 GGAGAAGGTGGGGAATGGG 59.385 63.158 0.00 0.00 0.00 4.00
69 70 1.615262 GAGAAGGTGGGGAATGGGG 59.385 63.158 0.00 0.00 0.00 4.96
70 71 1.151361 AGAAGGTGGGGAATGGGGT 60.151 57.895 0.00 0.00 0.00 4.95
71 72 1.000359 GAAGGTGGGGAATGGGGTG 60.000 63.158 0.00 0.00 0.00 4.61
72 73 3.238197 AAGGTGGGGAATGGGGTGC 62.238 63.158 0.00 0.00 0.00 5.01
76 77 4.506255 GGGGAATGGGGTGCGGAG 62.506 72.222 0.00 0.00 0.00 4.63
77 78 3.728373 GGGAATGGGGTGCGGAGT 61.728 66.667 0.00 0.00 0.00 3.85
78 79 2.438434 GGAATGGGGTGCGGAGTG 60.438 66.667 0.00 0.00 0.00 3.51
79 80 3.134127 GAATGGGGTGCGGAGTGC 61.134 66.667 0.00 0.00 46.70 4.40
128 129 2.435586 AGCGTGCATCCTGCTGTC 60.436 61.111 5.12 0.00 45.31 3.51
129 130 3.503363 GCGTGCATCCTGCTGTCC 61.503 66.667 0.00 0.00 45.31 4.02
130 131 2.821366 CGTGCATCCTGCTGTCCC 60.821 66.667 0.00 0.00 45.31 4.46
131 132 2.673523 GTGCATCCTGCTGTCCCT 59.326 61.111 0.00 0.00 45.31 4.20
132 133 1.451028 GTGCATCCTGCTGTCCCTC 60.451 63.158 0.00 0.00 45.31 4.30
133 134 2.202987 GCATCCTGCTGTCCCTCG 60.203 66.667 0.00 0.00 40.96 4.63
134 135 3.023949 GCATCCTGCTGTCCCTCGT 62.024 63.158 0.00 0.00 40.96 4.18
135 136 1.142748 CATCCTGCTGTCCCTCGTC 59.857 63.158 0.00 0.00 0.00 4.20
136 137 1.000993 ATCCTGCTGTCCCTCGTCT 59.999 57.895 0.00 0.00 0.00 4.18
137 138 1.040339 ATCCTGCTGTCCCTCGTCTC 61.040 60.000 0.00 0.00 0.00 3.36
138 139 1.680651 CCTGCTGTCCCTCGTCTCT 60.681 63.158 0.00 0.00 0.00 3.10
139 140 1.254284 CCTGCTGTCCCTCGTCTCTT 61.254 60.000 0.00 0.00 0.00 2.85
140 141 0.172352 CTGCTGTCCCTCGTCTCTTC 59.828 60.000 0.00 0.00 0.00 2.87
141 142 1.251527 TGCTGTCCCTCGTCTCTTCC 61.252 60.000 0.00 0.00 0.00 3.46
142 143 1.950973 GCTGTCCCTCGTCTCTTCCC 61.951 65.000 0.00 0.00 0.00 3.97
143 144 0.323908 CTGTCCCTCGTCTCTTCCCT 60.324 60.000 0.00 0.00 0.00 4.20
144 145 0.114560 TGTCCCTCGTCTCTTCCCTT 59.885 55.000 0.00 0.00 0.00 3.95
145 146 0.533032 GTCCCTCGTCTCTTCCCTTG 59.467 60.000 0.00 0.00 0.00 3.61
146 147 0.114560 TCCCTCGTCTCTTCCCTTGT 59.885 55.000 0.00 0.00 0.00 3.16
147 148 0.247736 CCCTCGTCTCTTCCCTTGTG 59.752 60.000 0.00 0.00 0.00 3.33
148 149 0.390472 CCTCGTCTCTTCCCTTGTGC 60.390 60.000 0.00 0.00 0.00 4.57
149 150 0.734253 CTCGTCTCTTCCCTTGTGCG 60.734 60.000 0.00 0.00 0.00 5.34
150 151 1.738099 CGTCTCTTCCCTTGTGCGG 60.738 63.158 0.00 0.00 0.00 5.69
151 152 2.035442 GTCTCTTCCCTTGTGCGGC 61.035 63.158 0.00 0.00 0.00 6.53
152 153 3.121030 CTCTTCCCTTGTGCGGCG 61.121 66.667 0.51 0.51 0.00 6.46
153 154 4.697756 TCTTCCCTTGTGCGGCGG 62.698 66.667 9.78 0.00 0.00 6.13
167 168 4.770874 GCGGCTAGGGTTTGCGGA 62.771 66.667 0.00 0.00 0.00 5.54
168 169 2.511600 CGGCTAGGGTTTGCGGAG 60.512 66.667 0.00 0.00 0.00 4.63
169 170 2.124695 GGCTAGGGTTTGCGGAGG 60.125 66.667 0.00 0.00 0.00 4.30
170 171 2.124695 GCTAGGGTTTGCGGAGGG 60.125 66.667 0.00 0.00 0.00 4.30
171 172 2.666098 GCTAGGGTTTGCGGAGGGA 61.666 63.158 0.00 0.00 0.00 4.20
172 173 1.522569 CTAGGGTTTGCGGAGGGAG 59.477 63.158 0.00 0.00 0.00 4.30
173 174 0.976073 CTAGGGTTTGCGGAGGGAGA 60.976 60.000 0.00 0.00 0.00 3.71
174 175 0.976073 TAGGGTTTGCGGAGGGAGAG 60.976 60.000 0.00 0.00 0.00 3.20
175 176 2.436824 GGTTTGCGGAGGGAGAGC 60.437 66.667 0.00 0.00 0.00 4.09
176 177 2.347490 GTTTGCGGAGGGAGAGCA 59.653 61.111 0.00 0.00 39.33 4.26
177 178 1.743252 GTTTGCGGAGGGAGAGCAG 60.743 63.158 0.00 0.00 42.19 4.24
178 179 3.612247 TTTGCGGAGGGAGAGCAGC 62.612 63.158 0.00 0.00 42.19 5.25
181 182 3.535962 CGGAGGGAGAGCAGCCTC 61.536 72.222 0.00 0.00 38.42 4.70
182 183 3.535962 GGAGGGAGAGCAGCCTCG 61.536 72.222 0.00 0.00 43.05 4.63
183 184 2.757917 GAGGGAGAGCAGCCTCGT 60.758 66.667 0.00 0.00 43.05 4.18
184 185 2.284258 AGGGAGAGCAGCCTCGTT 60.284 61.111 5.19 0.00 43.05 3.85
185 186 1.893919 GAGGGAGAGCAGCCTCGTTT 61.894 60.000 0.00 0.00 43.05 3.60
186 187 1.743252 GGGAGAGCAGCCTCGTTTG 60.743 63.158 5.19 0.00 43.05 2.93
187 188 2.394563 GGAGAGCAGCCTCGTTTGC 61.395 63.158 5.19 0.00 43.05 3.68
188 189 2.734673 GAGAGCAGCCTCGTTTGCG 61.735 63.158 0.00 0.00 44.80 4.85
189 190 4.451652 GAGCAGCCTCGTTTGCGC 62.452 66.667 0.00 0.00 44.80 6.09
211 212 4.035102 GGGCTTCGCTCCCTGGTT 62.035 66.667 0.00 0.00 40.66 3.67
212 213 2.436824 GGCTTCGCTCCCTGGTTC 60.437 66.667 0.00 0.00 0.00 3.62
213 214 2.815647 GCTTCGCTCCCTGGTTCG 60.816 66.667 0.00 0.00 0.00 3.95
214 215 2.657237 CTTCGCTCCCTGGTTCGT 59.343 61.111 0.00 0.00 0.00 3.85
215 216 1.738099 CTTCGCTCCCTGGTTCGTG 60.738 63.158 0.00 0.00 0.00 4.35
216 217 3.876589 TTCGCTCCCTGGTTCGTGC 62.877 63.158 0.00 0.00 0.00 5.34
218 219 4.373116 GCTCCCTGGTTCGTGCGA 62.373 66.667 0.00 0.00 0.00 5.10
219 220 2.579201 CTCCCTGGTTCGTGCGAT 59.421 61.111 0.00 0.00 0.00 4.58
220 221 1.811266 CTCCCTGGTTCGTGCGATG 60.811 63.158 0.00 0.00 0.00 3.84
221 222 2.819595 CCCTGGTTCGTGCGATGG 60.820 66.667 0.00 0.00 0.00 3.51
222 223 2.819595 CCTGGTTCGTGCGATGGG 60.820 66.667 0.00 0.00 0.00 4.00
223 224 2.047274 CTGGTTCGTGCGATGGGT 60.047 61.111 0.00 0.00 0.00 4.51
224 225 1.671054 CTGGTTCGTGCGATGGGTT 60.671 57.895 0.00 0.00 0.00 4.11
225 226 1.911293 CTGGTTCGTGCGATGGGTTG 61.911 60.000 0.00 0.00 0.00 3.77
226 227 1.964373 GGTTCGTGCGATGGGTTGT 60.964 57.895 0.00 0.00 0.00 3.32
227 228 1.495951 GTTCGTGCGATGGGTTGTC 59.504 57.895 0.00 0.00 0.00 3.18
228 229 2.024868 TTCGTGCGATGGGTTGTCG 61.025 57.895 0.00 0.00 41.77 4.35
229 230 3.487202 CGTGCGATGGGTTGTCGG 61.487 66.667 0.00 0.00 39.38 4.79
230 231 2.358247 GTGCGATGGGTTGTCGGT 60.358 61.111 0.00 0.00 39.38 4.69
231 232 2.047655 TGCGATGGGTTGTCGGTC 60.048 61.111 0.00 0.00 39.38 4.79
232 233 3.186047 GCGATGGGTTGTCGGTCG 61.186 66.667 0.00 0.00 39.38 4.79
233 234 2.569657 CGATGGGTTGTCGGTCGA 59.430 61.111 0.00 0.00 35.55 4.20
234 235 1.141019 CGATGGGTTGTCGGTCGAT 59.859 57.895 0.00 0.00 35.55 3.59
235 236 0.459585 CGATGGGTTGTCGGTCGATT 60.460 55.000 0.00 0.00 35.55 3.34
236 237 1.734163 GATGGGTTGTCGGTCGATTT 58.266 50.000 0.00 0.00 0.00 2.17
237 238 2.081462 GATGGGTTGTCGGTCGATTTT 58.919 47.619 0.00 0.00 0.00 1.82
238 239 1.970092 TGGGTTGTCGGTCGATTTTT 58.030 45.000 0.00 0.00 0.00 1.94
256 257 2.194201 TTTTTCTTAGGTGCGAGGGG 57.806 50.000 0.00 0.00 0.00 4.79
257 258 1.354101 TTTTCTTAGGTGCGAGGGGA 58.646 50.000 0.00 0.00 0.00 4.81
258 259 1.580059 TTTCTTAGGTGCGAGGGGAT 58.420 50.000 0.00 0.00 0.00 3.85
259 260 1.120530 TTCTTAGGTGCGAGGGGATC 58.879 55.000 0.00 0.00 0.00 3.36
268 269 3.936535 GAGGGGATCGTCGAAGGT 58.063 61.111 0.00 0.00 0.00 3.50
269 270 1.437986 GAGGGGATCGTCGAAGGTG 59.562 63.158 0.00 0.00 0.00 4.00
270 271 2.017559 GAGGGGATCGTCGAAGGTGG 62.018 65.000 0.00 0.00 0.00 4.61
271 272 2.499685 GGGATCGTCGAAGGTGGG 59.500 66.667 0.00 0.00 0.00 4.61
272 273 2.056223 GGGATCGTCGAAGGTGGGA 61.056 63.158 0.00 0.00 0.00 4.37
273 274 1.437986 GGATCGTCGAAGGTGGGAG 59.562 63.158 0.00 0.00 0.00 4.30
274 275 1.437986 GATCGTCGAAGGTGGGAGG 59.562 63.158 0.00 0.00 0.00 4.30
275 276 1.000019 ATCGTCGAAGGTGGGAGGA 60.000 57.895 0.00 0.00 0.00 3.71
276 277 1.038130 ATCGTCGAAGGTGGGAGGAG 61.038 60.000 0.00 0.00 31.48 3.69
277 278 2.711922 CGTCGAAGGTGGGAGGAGG 61.712 68.421 0.00 0.00 0.00 4.30
278 279 1.305046 GTCGAAGGTGGGAGGAGGA 60.305 63.158 0.00 0.00 0.00 3.71
279 280 1.305046 TCGAAGGTGGGAGGAGGAC 60.305 63.158 0.00 0.00 0.00 3.85
280 281 2.711922 CGAAGGTGGGAGGAGGACG 61.712 68.421 0.00 0.00 0.00 4.79
281 282 1.305046 GAAGGTGGGAGGAGGACGA 60.305 63.158 0.00 0.00 0.00 4.20
282 283 1.305381 AAGGTGGGAGGAGGACGAG 60.305 63.158 0.00 0.00 0.00 4.18
283 284 1.801302 AAGGTGGGAGGAGGACGAGA 61.801 60.000 0.00 0.00 0.00 4.04
284 285 1.305046 GGTGGGAGGAGGACGAGAA 60.305 63.158 0.00 0.00 0.00 2.87
285 286 0.903454 GGTGGGAGGAGGACGAGAAA 60.903 60.000 0.00 0.00 0.00 2.52
286 287 0.974383 GTGGGAGGAGGACGAGAAAA 59.026 55.000 0.00 0.00 0.00 2.29
287 288 1.346722 GTGGGAGGAGGACGAGAAAAA 59.653 52.381 0.00 0.00 0.00 1.94
338 339 3.541072 ACGAAAGTGGTGGGACGA 58.459 55.556 0.00 0.00 46.97 4.20
339 340 1.824658 ACGAAAGTGGTGGGACGAA 59.175 52.632 0.00 0.00 46.97 3.85
340 341 0.178533 ACGAAAGTGGTGGGACGAAA 59.821 50.000 0.00 0.00 46.97 3.46
341 342 1.301423 CGAAAGTGGTGGGACGAAAA 58.699 50.000 0.00 0.00 0.00 2.29
342 343 1.877443 CGAAAGTGGTGGGACGAAAAT 59.123 47.619 0.00 0.00 0.00 1.82
343 344 2.292292 CGAAAGTGGTGGGACGAAAATT 59.708 45.455 0.00 0.00 0.00 1.82
344 345 3.638484 GAAAGTGGTGGGACGAAAATTG 58.362 45.455 0.00 0.00 0.00 2.32
345 346 2.649531 AGTGGTGGGACGAAAATTGA 57.350 45.000 0.00 0.00 0.00 2.57
346 347 2.227194 AGTGGTGGGACGAAAATTGAC 58.773 47.619 0.00 0.00 0.00 3.18
347 348 1.268625 GTGGTGGGACGAAAATTGACC 59.731 52.381 0.00 0.00 0.00 4.02
348 349 0.519961 GGTGGGACGAAAATTGACCG 59.480 55.000 0.00 0.00 0.00 4.79
349 350 0.519961 GTGGGACGAAAATTGACCGG 59.480 55.000 0.00 0.00 0.00 5.28
350 351 1.238625 TGGGACGAAAATTGACCGGC 61.239 55.000 0.00 0.00 0.00 6.13
351 352 1.133869 GGACGAAAATTGACCGGCG 59.866 57.895 0.00 0.00 30.91 6.46
352 353 1.133869 GACGAAAATTGACCGGCGG 59.866 57.895 27.06 27.06 0.00 6.13
353 354 1.293267 GACGAAAATTGACCGGCGGA 61.293 55.000 35.78 11.41 0.00 5.54
354 355 0.885596 ACGAAAATTGACCGGCGGAA 60.886 50.000 35.78 18.61 0.00 4.30
355 356 0.238817 CGAAAATTGACCGGCGGAAA 59.761 50.000 35.78 25.52 0.00 3.13
356 357 1.693467 GAAAATTGACCGGCGGAAAC 58.307 50.000 35.78 22.33 0.00 2.78
357 358 1.268625 GAAAATTGACCGGCGGAAACT 59.731 47.619 35.78 13.79 0.00 2.66
358 359 2.188062 AAATTGACCGGCGGAAACTA 57.812 45.000 35.78 19.23 0.00 2.24
359 360 1.445871 AATTGACCGGCGGAAACTAC 58.554 50.000 35.78 15.65 0.00 2.73
360 361 0.392060 ATTGACCGGCGGAAACTACC 60.392 55.000 35.78 12.05 0.00 3.18
361 362 1.756408 TTGACCGGCGGAAACTACCA 61.756 55.000 35.78 14.44 0.00 3.25
362 363 1.004679 GACCGGCGGAAACTACCAA 60.005 57.895 35.78 0.00 0.00 3.67
363 364 1.293963 GACCGGCGGAAACTACCAAC 61.294 60.000 35.78 6.34 0.00 3.77
364 365 1.004200 CCGGCGGAAACTACCAACT 60.004 57.895 24.41 0.00 0.00 3.16
365 366 1.296056 CCGGCGGAAACTACCAACTG 61.296 60.000 24.41 0.00 0.00 3.16
366 367 1.873863 GGCGGAAACTACCAACTGC 59.126 57.895 0.00 0.00 0.00 4.40
367 368 0.605589 GGCGGAAACTACCAACTGCT 60.606 55.000 0.00 0.00 35.34 4.24
368 369 1.235724 GCGGAAACTACCAACTGCTT 58.764 50.000 0.00 0.00 0.00 3.91
369 370 1.197036 GCGGAAACTACCAACTGCTTC 59.803 52.381 0.00 0.00 0.00 3.86
370 371 2.489971 CGGAAACTACCAACTGCTTCA 58.510 47.619 0.00 0.00 0.00 3.02
371 372 3.074412 CGGAAACTACCAACTGCTTCAT 58.926 45.455 0.00 0.00 0.00 2.57
372 373 3.502211 CGGAAACTACCAACTGCTTCATT 59.498 43.478 0.00 0.00 0.00 2.57
373 374 4.693566 CGGAAACTACCAACTGCTTCATTA 59.306 41.667 0.00 0.00 0.00 1.90
374 375 5.163854 CGGAAACTACCAACTGCTTCATTAG 60.164 44.000 0.00 0.00 0.00 1.73
375 376 5.123979 GGAAACTACCAACTGCTTCATTAGG 59.876 44.000 0.00 0.00 0.00 2.69
376 377 5.499004 AACTACCAACTGCTTCATTAGGA 57.501 39.130 0.00 0.00 0.00 2.94
377 378 5.091261 ACTACCAACTGCTTCATTAGGAG 57.909 43.478 0.00 0.00 46.91 3.69
388 389 7.907214 TGCTTCATTAGGAGTAGAGAAAAAC 57.093 36.000 0.00 0.00 0.00 2.43
389 390 6.590292 TGCTTCATTAGGAGTAGAGAAAAACG 59.410 38.462 0.00 0.00 0.00 3.60
390 391 6.036191 GCTTCATTAGGAGTAGAGAAAAACGG 59.964 42.308 0.00 0.00 0.00 4.44
391 392 6.600882 TCATTAGGAGTAGAGAAAAACGGT 57.399 37.500 0.00 0.00 0.00 4.83
392 393 7.001099 TCATTAGGAGTAGAGAAAAACGGTT 57.999 36.000 0.00 0.00 0.00 4.44
393 394 7.095270 TCATTAGGAGTAGAGAAAAACGGTTC 58.905 38.462 0.00 0.00 0.00 3.62
394 395 4.950205 AGGAGTAGAGAAAAACGGTTCA 57.050 40.909 0.00 0.00 0.00 3.18
395 396 5.286267 AGGAGTAGAGAAAAACGGTTCAA 57.714 39.130 0.00 0.00 0.00 2.69
396 397 5.677567 AGGAGTAGAGAAAAACGGTTCAAA 58.322 37.500 0.00 0.00 0.00 2.69
397 398 6.117488 AGGAGTAGAGAAAAACGGTTCAAAA 58.883 36.000 0.00 0.00 0.00 2.44
398 399 6.771267 AGGAGTAGAGAAAAACGGTTCAAAAT 59.229 34.615 0.00 0.00 0.00 1.82
399 400 7.284716 AGGAGTAGAGAAAAACGGTTCAAAATT 59.715 33.333 0.00 0.00 0.00 1.82
400 401 7.378728 GGAGTAGAGAAAAACGGTTCAAAATTG 59.621 37.037 0.00 0.00 0.00 2.32
401 402 7.200455 AGTAGAGAAAAACGGTTCAAAATTGG 58.800 34.615 0.00 0.00 0.00 3.16
402 403 6.215495 AGAGAAAAACGGTTCAAAATTGGA 57.785 33.333 0.00 0.00 0.00 3.53
403 404 6.040247 AGAGAAAAACGGTTCAAAATTGGAC 58.960 36.000 0.00 0.00 35.90 4.02
404 405 4.801516 AGAAAAACGGTTCAAAATTGGACG 59.198 37.500 0.00 2.02 37.56 4.79
405 406 2.128367 AACGGTTCAAAATTGGACGC 57.872 45.000 0.00 0.00 37.56 5.19
406 407 1.025812 ACGGTTCAAAATTGGACGCA 58.974 45.000 0.00 0.00 37.56 5.24
407 408 1.611491 ACGGTTCAAAATTGGACGCAT 59.389 42.857 0.00 0.00 37.56 4.73
408 409 1.984990 CGGTTCAAAATTGGACGCATG 59.015 47.619 0.00 0.00 37.56 4.06
409 410 2.336667 GGTTCAAAATTGGACGCATGG 58.663 47.619 0.00 0.00 37.56 3.66
410 411 2.288763 GGTTCAAAATTGGACGCATGGT 60.289 45.455 0.00 0.00 37.56 3.55
411 412 3.389221 GTTCAAAATTGGACGCATGGTT 58.611 40.909 0.00 0.00 0.00 3.67
412 413 3.742433 TCAAAATTGGACGCATGGTTT 57.258 38.095 0.00 0.00 0.00 3.27
413 414 4.855715 TCAAAATTGGACGCATGGTTTA 57.144 36.364 0.00 0.00 0.00 2.01
414 415 5.201713 TCAAAATTGGACGCATGGTTTAA 57.798 34.783 0.00 0.00 0.00 1.52
415 416 5.226396 TCAAAATTGGACGCATGGTTTAAG 58.774 37.500 0.00 0.00 0.00 1.85
416 417 5.010112 TCAAAATTGGACGCATGGTTTAAGA 59.990 36.000 0.00 0.00 0.00 2.10
417 418 4.701956 AATTGGACGCATGGTTTAAGAG 57.298 40.909 0.00 0.00 0.00 2.85
418 419 3.410631 TTGGACGCATGGTTTAAGAGA 57.589 42.857 0.00 0.00 0.00 3.10
419 420 3.627395 TGGACGCATGGTTTAAGAGAT 57.373 42.857 0.00 0.00 0.00 2.75
420 421 4.746535 TGGACGCATGGTTTAAGAGATA 57.253 40.909 0.00 0.00 0.00 1.98
421 422 5.092554 TGGACGCATGGTTTAAGAGATAA 57.907 39.130 0.00 0.00 0.00 1.75
422 423 5.116180 TGGACGCATGGTTTAAGAGATAAG 58.884 41.667 0.00 0.00 0.00 1.73
423 424 5.105106 TGGACGCATGGTTTAAGAGATAAGA 60.105 40.000 0.00 0.00 0.00 2.10
424 425 5.992217 GGACGCATGGTTTAAGAGATAAGAT 59.008 40.000 0.00 0.00 0.00 2.40
425 426 6.073548 GGACGCATGGTTTAAGAGATAAGATG 60.074 42.308 0.00 0.00 0.00 2.90
426 427 6.582636 ACGCATGGTTTAAGAGATAAGATGA 58.417 36.000 0.00 0.00 0.00 2.92
427 428 7.220030 ACGCATGGTTTAAGAGATAAGATGAT 58.780 34.615 0.00 0.00 0.00 2.45
428 429 7.716998 ACGCATGGTTTAAGAGATAAGATGATT 59.283 33.333 0.00 0.00 0.00 2.57
429 430 8.562892 CGCATGGTTTAAGAGATAAGATGATTT 58.437 33.333 0.00 0.00 0.00 2.17
430 431 9.674824 GCATGGTTTAAGAGATAAGATGATTTG 57.325 33.333 0.00 0.00 0.00 2.32
446 447 9.825972 AAGATGATTTGAATAAACAACTGTACG 57.174 29.630 0.00 0.00 0.00 3.67
447 448 9.214957 AGATGATTTGAATAAACAACTGTACGA 57.785 29.630 0.00 0.00 0.00 3.43
448 449 9.820229 GATGATTTGAATAAACAACTGTACGAA 57.180 29.630 0.00 0.00 0.00 3.85
476 477 9.701355 AAAGAAATTTTTAAAATGCGACAAGTG 57.299 25.926 3.51 0.00 0.00 3.16
477 478 8.641499 AGAAATTTTTAAAATGCGACAAGTGA 57.359 26.923 3.51 0.00 0.00 3.41
478 479 8.539674 AGAAATTTTTAAAATGCGACAAGTGAC 58.460 29.630 3.51 0.00 0.00 3.67
479 480 5.858159 TTTTTAAAATGCGACAAGTGACG 57.142 34.783 0.55 0.00 36.38 4.35
485 486 2.094539 CGACAAGTGACGCGCATG 59.905 61.111 5.73 4.32 0.00 4.06
486 487 2.202222 GACAAGTGACGCGCATGC 60.202 61.111 5.73 7.91 37.91 4.06
487 488 2.953605 GACAAGTGACGCGCATGCA 61.954 57.895 19.57 0.00 42.97 3.96
488 489 2.202260 CAAGTGACGCGCATGCAG 60.202 61.111 19.57 13.48 42.97 4.41
489 490 2.666190 AAGTGACGCGCATGCAGT 60.666 55.556 19.57 16.86 42.97 4.40
490 491 2.958204 AAGTGACGCGCATGCAGTG 61.958 57.895 19.57 18.30 42.97 3.66
491 492 3.413861 GTGACGCGCATGCAGTGA 61.414 61.111 23.27 12.83 42.97 3.41
492 493 3.113979 TGACGCGCATGCAGTGAG 61.114 61.111 23.27 10.75 42.97 3.51
496 497 3.515286 GCGCATGCAGTGAGCCAT 61.515 61.111 19.57 0.00 46.46 4.40
497 498 3.060020 GCGCATGCAGTGAGCCATT 62.060 57.895 19.57 0.00 46.46 3.16
498 499 1.509463 CGCATGCAGTGAGCCATTT 59.491 52.632 19.57 0.00 44.83 2.32
499 500 0.108992 CGCATGCAGTGAGCCATTTT 60.109 50.000 19.57 0.00 44.83 1.82
500 501 1.636988 GCATGCAGTGAGCCATTTTC 58.363 50.000 14.21 0.00 44.83 2.29
501 502 1.904144 CATGCAGTGAGCCATTTTCG 58.096 50.000 0.00 0.00 44.83 3.46
502 503 0.171903 ATGCAGTGAGCCATTTTCGC 59.828 50.000 0.00 0.00 44.83 4.70
503 504 1.171549 TGCAGTGAGCCATTTTCGCA 61.172 50.000 0.00 0.00 44.83 5.10
504 505 0.039256 GCAGTGAGCCATTTTCGCAA 60.039 50.000 0.00 0.00 37.23 4.85
505 506 1.689959 CAGTGAGCCATTTTCGCAAC 58.310 50.000 0.00 0.00 0.00 4.17
506 507 0.598065 AGTGAGCCATTTTCGCAACC 59.402 50.000 0.00 0.00 0.00 3.77
507 508 0.598065 GTGAGCCATTTTCGCAACCT 59.402 50.000 0.00 0.00 0.00 3.50
508 509 0.597568 TGAGCCATTTTCGCAACCTG 59.402 50.000 0.00 0.00 0.00 4.00
509 510 0.598065 GAGCCATTTTCGCAACCTGT 59.402 50.000 0.00 0.00 0.00 4.00
510 511 0.314935 AGCCATTTTCGCAACCTGTG 59.685 50.000 0.00 0.00 0.00 3.66
511 512 0.667184 GCCATTTTCGCAACCTGTGG 60.667 55.000 0.00 0.00 0.00 4.17
512 513 0.673437 CCATTTTCGCAACCTGTGGT 59.327 50.000 0.00 0.00 37.65 4.16
513 514 1.602668 CCATTTTCGCAACCTGTGGTG 60.603 52.381 0.00 0.00 35.34 4.17
514 515 0.673437 ATTTTCGCAACCTGTGGTGG 59.327 50.000 0.00 0.00 35.34 4.61
515 516 1.388065 TTTTCGCAACCTGTGGTGGG 61.388 55.000 0.00 0.00 35.34 4.61
516 517 2.272230 TTTCGCAACCTGTGGTGGGA 62.272 55.000 0.00 0.00 35.34 4.37
517 518 2.669569 CGCAACCTGTGGTGGGAG 60.670 66.667 0.00 0.00 35.34 4.30
518 519 2.836154 GCAACCTGTGGTGGGAGA 59.164 61.111 0.00 0.00 35.34 3.71
519 520 1.302832 GCAACCTGTGGTGGGAGAG 60.303 63.158 0.00 0.00 35.34 3.20
520 521 1.768684 GCAACCTGTGGTGGGAGAGA 61.769 60.000 0.00 0.00 35.34 3.10
521 522 0.764890 CAACCTGTGGTGGGAGAGAA 59.235 55.000 0.00 0.00 35.34 2.87
522 523 0.765510 AACCTGTGGTGGGAGAGAAC 59.234 55.000 0.00 0.00 35.34 3.01
523 524 0.104934 ACCTGTGGTGGGAGAGAACT 60.105 55.000 0.00 0.00 32.98 3.01
524 525 1.059913 CCTGTGGTGGGAGAGAACTT 58.940 55.000 0.00 0.00 0.00 2.66
525 526 1.421646 CCTGTGGTGGGAGAGAACTTT 59.578 52.381 0.00 0.00 0.00 2.66
526 527 2.498167 CTGTGGTGGGAGAGAACTTTG 58.502 52.381 0.00 0.00 0.00 2.77
527 528 2.104792 CTGTGGTGGGAGAGAACTTTGA 59.895 50.000 0.00 0.00 0.00 2.69
528 529 2.507886 TGTGGTGGGAGAGAACTTTGAA 59.492 45.455 0.00 0.00 0.00 2.69
529 530 3.053991 TGTGGTGGGAGAGAACTTTGAAA 60.054 43.478 0.00 0.00 0.00 2.69
530 531 3.315470 GTGGTGGGAGAGAACTTTGAAAC 59.685 47.826 0.00 0.00 0.00 2.78
531 532 2.548480 GGTGGGAGAGAACTTTGAAACG 59.452 50.000 0.00 0.00 0.00 3.60
532 533 3.463944 GTGGGAGAGAACTTTGAAACGA 58.536 45.455 0.00 0.00 0.00 3.85
533 534 3.495001 GTGGGAGAGAACTTTGAAACGAG 59.505 47.826 0.00 0.00 0.00 4.18
534 535 3.134081 TGGGAGAGAACTTTGAAACGAGT 59.866 43.478 0.00 0.00 0.00 4.18
535 536 4.342951 TGGGAGAGAACTTTGAAACGAGTA 59.657 41.667 0.00 0.00 0.00 2.59
536 537 5.163385 TGGGAGAGAACTTTGAAACGAGTAA 60.163 40.000 0.00 0.00 0.00 2.24
537 538 5.932883 GGGAGAGAACTTTGAAACGAGTAAT 59.067 40.000 0.00 0.00 0.00 1.89
538 539 6.427242 GGGAGAGAACTTTGAAACGAGTAATT 59.573 38.462 0.00 0.00 0.00 1.40
539 540 7.041303 GGGAGAGAACTTTGAAACGAGTAATTT 60.041 37.037 0.00 0.00 0.00 1.82
540 541 8.343366 GGAGAGAACTTTGAAACGAGTAATTTT 58.657 33.333 0.00 0.00 0.00 1.82
541 542 9.371333 GAGAGAACTTTGAAACGAGTAATTTTC 57.629 33.333 0.00 0.00 0.00 2.29
542 543 8.889717 AGAGAACTTTGAAACGAGTAATTTTCA 58.110 29.630 0.00 0.00 0.00 2.69
543 544 9.498307 GAGAACTTTGAAACGAGTAATTTTCAA 57.502 29.630 5.59 5.59 40.38 2.69
565 566 9.527157 TTCAATTAATGATTTCCTCTTGTACCA 57.473 29.630 0.00 0.00 38.03 3.25
566 567 8.956426 TCAATTAATGATTTCCTCTTGTACCAC 58.044 33.333 0.00 0.00 31.50 4.16
567 568 8.960591 CAATTAATGATTTCCTCTTGTACCACT 58.039 33.333 0.00 0.00 0.00 4.00
571 572 7.923414 ATGATTTCCTCTTGTACCACTAAAC 57.077 36.000 0.00 0.00 0.00 2.01
572 573 5.929992 TGATTTCCTCTTGTACCACTAAACG 59.070 40.000 0.00 0.00 0.00 3.60
573 574 5.534207 TTTCCTCTTGTACCACTAAACGA 57.466 39.130 0.00 0.00 0.00 3.85
574 575 4.778534 TCCTCTTGTACCACTAAACGAG 57.221 45.455 0.00 0.00 0.00 4.18
575 576 3.057033 TCCTCTTGTACCACTAAACGAGC 60.057 47.826 0.00 0.00 0.00 5.03
576 577 3.305813 CCTCTTGTACCACTAAACGAGCA 60.306 47.826 0.00 0.00 0.00 4.26
577 578 4.495422 CTCTTGTACCACTAAACGAGCAT 58.505 43.478 0.00 0.00 0.00 3.79
578 579 4.491676 TCTTGTACCACTAAACGAGCATC 58.508 43.478 0.00 0.00 0.00 3.91
589 590 3.577313 GAGCATCGCCCGAAAGCC 61.577 66.667 12.65 4.12 32.19 4.35
590 591 4.101448 AGCATCGCCCGAAAGCCT 62.101 61.111 12.65 1.74 32.19 4.58
591 592 2.203015 GCATCGCCCGAAAGCCTA 60.203 61.111 7.08 0.00 0.00 3.93
592 593 1.817941 GCATCGCCCGAAAGCCTAA 60.818 57.895 7.08 0.00 0.00 2.69
593 594 2.014594 CATCGCCCGAAAGCCTAAC 58.985 57.895 0.00 0.00 0.00 2.34
594 595 0.462047 CATCGCCCGAAAGCCTAACT 60.462 55.000 0.00 0.00 0.00 2.24
595 596 0.252197 ATCGCCCGAAAGCCTAACTT 59.748 50.000 0.00 0.00 41.70 2.66
605 606 4.841443 AAAGCCTAACTTTTTGTACCGG 57.159 40.909 0.00 0.00 46.73 5.28
606 607 2.156917 AGCCTAACTTTTTGTACCGGC 58.843 47.619 0.00 0.00 36.35 6.13
607 608 2.156917 GCCTAACTTTTTGTACCGGCT 58.843 47.619 0.00 0.00 34.57 5.52
608 609 3.008266 AGCCTAACTTTTTGTACCGGCTA 59.992 43.478 0.00 0.00 41.04 3.93
609 610 3.943381 GCCTAACTTTTTGTACCGGCTAT 59.057 43.478 0.00 0.00 34.57 2.97
610 611 5.104817 AGCCTAACTTTTTGTACCGGCTATA 60.105 40.000 0.00 0.00 41.04 1.31
611 612 5.235831 GCCTAACTTTTTGTACCGGCTATAG 59.764 44.000 0.00 0.00 34.57 1.31
612 613 5.235831 CCTAACTTTTTGTACCGGCTATAGC 59.764 44.000 16.78 16.78 41.14 2.97
613 614 4.210724 ACTTTTTGTACCGGCTATAGCA 57.789 40.909 25.53 2.53 44.36 3.49
614 615 4.581868 ACTTTTTGTACCGGCTATAGCAA 58.418 39.130 25.53 7.87 44.36 3.91
615 616 5.190677 ACTTTTTGTACCGGCTATAGCAAT 58.809 37.500 25.53 12.62 44.36 3.56
616 617 5.650703 ACTTTTTGTACCGGCTATAGCAATT 59.349 36.000 25.53 11.15 44.36 2.32
617 618 6.152154 ACTTTTTGTACCGGCTATAGCAATTT 59.848 34.615 25.53 9.44 44.36 1.82
618 619 7.337436 ACTTTTTGTACCGGCTATAGCAATTTA 59.663 33.333 25.53 8.50 44.36 1.40
619 620 7.627298 TTTTGTACCGGCTATAGCAATTTAA 57.373 32.000 25.53 10.50 44.36 1.52
620 621 6.607735 TTGTACCGGCTATAGCAATTTAAC 57.392 37.500 25.53 14.93 44.36 2.01
621 622 4.746115 TGTACCGGCTATAGCAATTTAACG 59.254 41.667 25.53 16.76 44.36 3.18
622 623 2.546789 ACCGGCTATAGCAATTTAACGC 59.453 45.455 25.53 4.56 44.36 4.84
623 624 2.806244 CCGGCTATAGCAATTTAACGCT 59.194 45.455 25.53 0.00 44.36 5.07
624 625 3.991773 CCGGCTATAGCAATTTAACGCTA 59.008 43.478 25.53 3.61 44.40 4.26
625 626 4.449743 CCGGCTATAGCAATTTAACGCTAA 59.550 41.667 25.53 0.00 43.56 3.09
626 627 5.371629 CGGCTATAGCAATTTAACGCTAAC 58.628 41.667 25.53 2.74 43.56 2.34
627 628 5.614013 CGGCTATAGCAATTTAACGCTAACC 60.614 44.000 25.53 2.11 43.56 2.85
628 629 5.334646 GGCTATAGCAATTTAACGCTAACCC 60.335 44.000 25.53 0.00 43.56 4.11
629 630 5.237779 GCTATAGCAATTTAACGCTAACCCA 59.762 40.000 20.01 0.00 43.56 4.51
630 631 6.238538 GCTATAGCAATTTAACGCTAACCCAA 60.239 38.462 20.01 0.00 43.56 4.12
631 632 4.857509 AGCAATTTAACGCTAACCCAAA 57.142 36.364 0.00 0.00 36.50 3.28
632 633 5.203060 AGCAATTTAACGCTAACCCAAAA 57.797 34.783 0.00 0.00 36.50 2.44
633 634 5.227152 AGCAATTTAACGCTAACCCAAAAG 58.773 37.500 0.00 0.00 36.50 2.27
634 635 5.010213 AGCAATTTAACGCTAACCCAAAAGA 59.990 36.000 0.00 0.00 36.50 2.52
635 636 5.692654 GCAATTTAACGCTAACCCAAAAGAA 59.307 36.000 0.00 0.00 0.00 2.52
636 637 6.346279 GCAATTTAACGCTAACCCAAAAGAAC 60.346 38.462 0.00 0.00 0.00 3.01
637 638 4.834357 TTAACGCTAACCCAAAAGAACC 57.166 40.909 0.00 0.00 0.00 3.62
638 639 1.232119 ACGCTAACCCAAAAGAACCG 58.768 50.000 0.00 0.00 0.00 4.44
639 640 1.232119 CGCTAACCCAAAAGAACCGT 58.768 50.000 0.00 0.00 0.00 4.83
640 641 1.605232 CGCTAACCCAAAAGAACCGTT 59.395 47.619 0.00 0.00 0.00 4.44
641 642 2.807392 CGCTAACCCAAAAGAACCGTTA 59.193 45.455 0.00 0.00 0.00 3.18
642 643 3.250521 CGCTAACCCAAAAGAACCGTTAA 59.749 43.478 0.00 0.00 0.00 2.01
643 644 4.083164 CGCTAACCCAAAAGAACCGTTAAT 60.083 41.667 0.00 0.00 0.00 1.40
644 645 5.158494 GCTAACCCAAAAGAACCGTTAATG 58.842 41.667 0.00 0.00 0.00 1.90
645 646 5.048573 GCTAACCCAAAAGAACCGTTAATGA 60.049 40.000 0.00 0.00 0.00 2.57
646 647 4.841443 ACCCAAAAGAACCGTTAATGAC 57.159 40.909 0.00 0.00 0.00 3.06
647 648 3.570975 ACCCAAAAGAACCGTTAATGACC 59.429 43.478 0.00 0.00 0.00 4.02
648 649 3.824443 CCCAAAAGAACCGTTAATGACCT 59.176 43.478 0.00 0.00 0.00 3.85
649 650 5.005094 CCCAAAAGAACCGTTAATGACCTA 58.995 41.667 0.00 0.00 0.00 3.08
650 651 5.474189 CCCAAAAGAACCGTTAATGACCTAA 59.526 40.000 0.00 0.00 0.00 2.69
651 652 6.152154 CCCAAAAGAACCGTTAATGACCTAAT 59.848 38.462 0.00 0.00 0.00 1.73
652 653 7.027161 CCAAAAGAACCGTTAATGACCTAATG 58.973 38.462 0.00 0.00 0.00 1.90
653 654 6.753107 AAAGAACCGTTAATGACCTAATGG 57.247 37.500 0.00 0.96 41.79 3.16
654 655 5.687166 AGAACCGTTAATGACCTAATGGA 57.313 39.130 8.29 0.00 39.43 3.41
655 656 5.425630 AGAACCGTTAATGACCTAATGGAC 58.574 41.667 8.29 3.31 39.43 4.02
656 657 5.189145 AGAACCGTTAATGACCTAATGGACT 59.811 40.000 8.29 5.06 39.43 3.85
657 658 6.381994 AGAACCGTTAATGACCTAATGGACTA 59.618 38.462 8.29 0.00 39.43 2.59
658 659 6.742559 ACCGTTAATGACCTAATGGACTAT 57.257 37.500 8.29 0.00 39.43 2.12
659 660 7.133133 ACCGTTAATGACCTAATGGACTATT 57.867 36.000 8.29 0.00 39.43 1.73
660 661 8.253867 ACCGTTAATGACCTAATGGACTATTA 57.746 34.615 8.29 0.00 39.43 0.98
661 662 8.365647 ACCGTTAATGACCTAATGGACTATTAG 58.634 37.037 10.76 10.76 45.16 1.73
662 663 7.331193 CCGTTAATGACCTAATGGACTATTAGC 59.669 40.741 11.98 2.23 44.53 3.09
673 674 9.599322 CTAATGGACTATTAGCGCTAAAATTTG 57.401 33.333 31.78 18.92 41.18 2.32
686 687 4.620567 GCTAAAATTTGAGCCCAATTCCGT 60.621 41.667 15.81 0.00 32.25 4.69
740 742 1.079073 CCCCTCCACAGCCCAAAAT 59.921 57.895 0.00 0.00 0.00 1.82
780 782 4.498520 GCTGCGAGCCTGCGACTA 62.499 66.667 0.00 0.00 34.48 2.59
781 783 2.181777 CTGCGAGCCTGCGACTAA 59.818 61.111 0.00 0.00 37.81 2.24
782 784 1.875813 CTGCGAGCCTGCGACTAAG 60.876 63.158 0.00 0.00 37.81 2.18
783 785 3.258290 GCGAGCCTGCGACTAAGC 61.258 66.667 0.00 0.00 37.71 3.09
784 786 2.181777 CGAGCCTGCGACTAAGCA 59.818 61.111 0.00 0.00 45.96 3.91
814 816 2.811317 GCTGGTTGACTCGCTCCG 60.811 66.667 0.00 0.00 0.00 4.63
1022 1025 1.519455 CCCAGAAGACGCCATCGAC 60.519 63.158 0.00 0.00 39.41 4.20
1076 1082 9.955102 CCTCTTATCAATTATCTCATTGATCCA 57.045 33.333 11.30 1.63 46.60 3.41
1081 1087 8.618702 ATCAATTATCTCATTGATCCACTGAC 57.381 34.615 3.53 0.00 46.60 3.51
1088 1094 3.055602 TCATTGATCCACTGACCACTGAG 60.056 47.826 0.00 0.00 0.00 3.35
1106 1112 6.263842 CCACTGAGGATGTATGCATTGTAAAT 59.736 38.462 3.54 0.00 41.22 1.40
1107 1113 7.358066 CACTGAGGATGTATGCATTGTAAATC 58.642 38.462 3.54 0.00 35.07 2.17
1138 1148 0.740737 GGCTGTCTCTCTGCTCTCTC 59.259 60.000 0.00 0.00 40.19 3.20
1163 1173 6.535150 CGGAGCTTGTTCTGAATAAGATTACA 59.465 38.462 25.13 1.19 33.93 2.41
1223 1233 8.094548 TGTATGTGATCTGGTTACAATATAGGC 58.905 37.037 0.00 0.00 29.37 3.93
1230 1240 4.314961 TGGTTACAATATAGGCGCAGATG 58.685 43.478 10.83 1.26 0.00 2.90
1235 1245 5.405935 ACAATATAGGCGCAGATGTCATA 57.594 39.130 10.83 0.00 0.00 2.15
1345 1355 4.353777 AGTGGTTACAGCCTAATGAGAGA 58.646 43.478 0.00 0.00 0.00 3.10
1364 1374 0.331646 AGGGATAGGGGAGGTAGGGT 60.332 60.000 0.00 0.00 0.00 4.34
1370 1380 2.376165 GGGGAGGTAGGGTTCCAGC 61.376 68.421 0.00 0.00 35.09 4.85
1454 1464 3.206964 TGGAACACACTTATTTGACGCA 58.793 40.909 0.00 0.00 0.00 5.24
1572 1584 3.660865 AGGTCGTTTCATCGCTTTAAGT 58.339 40.909 0.00 0.00 0.00 2.24
1857 1880 5.770417 CACTCGTTACCTTCAGTTAGACTT 58.230 41.667 0.00 0.00 0.00 3.01
1918 1962 2.426522 TCTTTCTGCTCGTCCAATTGG 58.573 47.619 19.08 19.08 0.00 3.16
1921 1965 1.002134 CTGCTCGTCCAATTGGGGT 60.002 57.895 24.29 0.00 37.22 4.95
1925 1969 0.324943 CTCGTCCAATTGGGGTGTCT 59.675 55.000 24.29 0.00 37.22 3.41
1933 1977 6.239487 CGTCCAATTGGGGTGTCTAATAGATA 60.239 42.308 24.29 0.00 37.22 1.98
1947 1991 8.418662 TGTCTAATAGATATTTAGTGGCAACGT 58.581 33.333 0.00 0.00 42.51 3.99
2056 2487 1.171308 CAACTCTTGCCACATCCCAG 58.829 55.000 0.00 0.00 0.00 4.45
2075 2506 6.454795 TCCCAGCTTAATTGAAATGTTTGAC 58.545 36.000 0.00 0.00 0.00 3.18
2106 2639 8.322428 CGGTTGGTTAGTAAACATTTGTTTTTC 58.678 33.333 13.40 8.04 45.07 2.29
2142 2720 5.939457 TCTACTCAGATGTACAAACAGACG 58.061 41.667 0.00 0.00 39.49 4.18
2159 2737 2.000447 GACGCAGGCTCGTTCTTATTT 59.000 47.619 12.05 0.00 43.42 1.40
2252 2830 7.976734 TGTCCGTTTGTAAAACATCTGAAAAAT 59.023 29.630 3.97 0.00 0.00 1.82
2304 2882 3.674997 GAGGTAAGCACATTGGAAGACA 58.325 45.455 0.00 0.00 0.00 3.41
2306 2884 3.821033 AGGTAAGCACATTGGAAGACAAC 59.179 43.478 0.00 0.00 42.94 3.32
2411 2995 5.916883 CGCCATATCCTCAAATTCAATTGTC 59.083 40.000 5.13 0.00 0.00 3.18
2448 3032 6.293790 GGTTAGGCTTTACAACTTACAACCAG 60.294 42.308 0.00 0.00 33.52 4.00
2611 3268 7.280356 AGTTAACTTGACTAATGTGGTGAACT 58.720 34.615 1.12 0.00 0.00 3.01
2881 3756 0.868406 CCGTCTCAGTTCAAGTTGCC 59.132 55.000 0.00 0.00 0.00 4.52
2993 3868 3.364764 GCTTTTTGTCTAGCTCTGTGCAG 60.365 47.826 4.39 0.00 45.94 4.41
3068 3949 1.974957 TGGTGCTCACTAAACCTGCTA 59.025 47.619 0.00 0.00 34.90 3.49
3377 4265 8.456471 AGTTCTACTTGTTCAAAAAGGTAACAC 58.544 33.333 0.00 0.00 41.41 3.32
3434 4322 4.716784 TGAGGCTTATATGTCCAGTGTCTT 59.283 41.667 0.00 0.00 0.00 3.01
3469 4357 2.033299 CACGTTGTGCCTGATTTCTTGT 59.967 45.455 0.00 0.00 0.00 3.16
3608 4497 0.238289 CCGATGCACAAACACTCCAC 59.762 55.000 0.00 0.00 0.00 4.02
3729 4780 6.539464 ACGAAGGTATGTCTAGTCAAGTAGAG 59.461 42.308 0.00 0.00 29.38 2.43
3768 4819 7.546358 TCACATGTCTTCAATTCACTTTGTTT 58.454 30.769 0.00 0.00 0.00 2.83
3775 4826 7.330700 GTCTTCAATTCACTTTGTTTGTTTCCA 59.669 33.333 0.00 0.00 0.00 3.53
3778 4829 8.383318 TCAATTCACTTTGTTTGTTTCCAAAA 57.617 26.923 0.00 0.00 41.99 2.44
3805 4856 4.142116 TGTTTTCTGTTCCTGTAGTGTCGA 60.142 41.667 0.00 0.00 0.00 4.20
3832 4883 2.859806 GCATCAAGTGGCACAAGTGAAC 60.860 50.000 21.41 12.12 44.16 3.18
3872 4923 2.555325 CAGCAATTGGACAAGAAGCTGA 59.445 45.455 21.35 0.00 41.59 4.26
3920 4971 2.393271 AACTTTCTCAGCTCATCGGG 57.607 50.000 0.00 0.00 0.00 5.14
3922 4973 1.625818 ACTTTCTCAGCTCATCGGGTT 59.374 47.619 0.00 0.00 0.00 4.11
3925 4976 3.973206 TTCTCAGCTCATCGGGTTAAA 57.027 42.857 0.00 0.00 0.00 1.52
3936 4987 6.198966 GCTCATCGGGTTAAAATTTGCAATAG 59.801 38.462 0.00 0.00 0.00 1.73
4132 5366 6.335471 TCTGTAGAAATCGTTGAACCAGTA 57.665 37.500 0.00 0.00 0.00 2.74
4135 5369 6.518493 TGTAGAAATCGTTGAACCAGTACTT 58.482 36.000 0.00 0.00 0.00 2.24
4154 5389 1.152398 GCCGTATAGTCCCTGGGGA 60.152 63.158 14.00 3.92 42.90 4.81
4178 5413 2.036475 CCCTGGATAGAAGATGACGGTG 59.964 54.545 0.00 0.00 0.00 4.94
4198 5433 0.700564 AGTCATGATGTTGTGGGCCT 59.299 50.000 4.53 0.00 0.00 5.19
4245 5480 1.134699 TCGATCTTGATGAGCACCACC 60.135 52.381 0.00 0.00 0.00 4.61
4250 5485 0.325933 TTGATGAGCACCACCTCCAG 59.674 55.000 0.00 0.00 0.00 3.86
4277 5512 5.472137 TGAAACTCCATTGTACCTAGCAAAC 59.528 40.000 0.00 0.00 0.00 2.93
4282 5517 5.001232 TCCATTGTACCTAGCAAACTGTTC 58.999 41.667 0.00 0.00 0.00 3.18
4292 5527 3.743521 AGCAAACTGTTCTAGACATGCA 58.256 40.909 12.09 0.00 37.69 3.96
4296 5531 2.969990 ACTGTTCTAGACATGCAGCAG 58.030 47.619 0.00 0.00 37.69 4.24
4307 5542 0.397187 ATGCAGCAGAGGCAGGATAG 59.603 55.000 0.00 0.00 45.68 2.08
4344 5579 1.000283 GACATAGGATGAGGAGGTGCG 60.000 57.143 0.00 0.00 0.00 5.34
4345 5580 0.320247 CATAGGATGAGGAGGTGCGC 60.320 60.000 0.00 0.00 0.00 6.09
4357 5592 2.390599 GGTGCGCGCAGATGAAGAA 61.391 57.895 37.44 5.80 0.00 2.52
4362 5597 0.644331 CGCGCAGATGAAGAAGACAG 59.356 55.000 8.75 0.00 0.00 3.51
4365 5600 1.392853 CGCAGATGAAGAAGACAGTGC 59.607 52.381 0.00 0.00 0.00 4.40
4387 5622 2.438254 GGATGCACGTCCATGGCA 60.438 61.111 6.96 0.00 42.43 4.92
4390 5625 2.270297 GATGCACGTCCATGGCAACC 62.270 60.000 6.96 0.00 41.43 3.77
4392 5627 4.101790 CACGTCCATGGCAACCGC 62.102 66.667 6.96 0.00 37.44 5.68
4412 5647 1.983224 CTCCTTGGTGGTGGATCGT 59.017 57.895 0.00 0.00 37.07 3.73
4415 5650 0.955428 CCTTGGTGGTGGATCGTGTG 60.955 60.000 0.00 0.00 0.00 3.82
4438 5674 3.839432 GGGAGGGGCGAGAACGAG 61.839 72.222 0.00 0.00 42.66 4.18
4467 5703 1.669115 CCTCTGGTTGCGGTGACTG 60.669 63.158 0.00 0.00 0.00 3.51
4477 5713 4.792087 GGTGACTGCCGGAAAAGA 57.208 55.556 5.05 0.00 0.00 2.52
4487 5723 1.369091 CCGGAAAAGATGGCAGACGG 61.369 60.000 0.00 0.00 0.00 4.79
4491 5727 0.678048 AAAAGATGGCAGACGGAGGC 60.678 55.000 0.00 0.00 0.00 4.70
4492 5728 1.841302 AAAGATGGCAGACGGAGGCA 61.841 55.000 0.00 3.02 45.98 4.75
4495 5731 3.321648 TGGCAGACGGAGGCATGT 61.322 61.111 0.00 0.00 36.56 3.21
4496 5732 2.821366 GGCAGACGGAGGCATGTG 60.821 66.667 0.00 0.00 0.00 3.21
4497 5733 2.046892 GCAGACGGAGGCATGTGT 60.047 61.111 0.00 0.00 0.00 3.72
4498 5734 2.393768 GCAGACGGAGGCATGTGTG 61.394 63.158 0.00 0.00 32.93 3.82
4499 5735 1.293179 CAGACGGAGGCATGTGTGA 59.707 57.895 0.00 0.00 31.53 3.58
4500 5736 0.320683 CAGACGGAGGCATGTGTGAA 60.321 55.000 0.00 0.00 31.53 3.18
4525 5779 1.605712 GGAGCCGATCGATAGTTTGGG 60.606 57.143 18.66 0.00 39.36 4.12
4530 5784 3.267483 CCGATCGATAGTTTGGGTTTGT 58.733 45.455 18.66 0.00 35.98 2.83
4541 5795 4.583073 AGTTTGGGTTTGTGTGAAGATACC 59.417 41.667 0.00 0.00 0.00 2.73
4569 5823 2.850016 ACCTTTCCCGGTCAGTTCT 58.150 52.632 0.00 0.00 29.14 3.01
4570 5824 0.685660 ACCTTTCCCGGTCAGTTCTC 59.314 55.000 0.00 0.00 29.14 2.87
4574 5828 2.430382 TTCCCGGTCAGTTCTCGTGC 62.430 60.000 0.00 0.00 0.00 5.34
4575 5829 2.805353 CCGGTCAGTTCTCGTGCG 60.805 66.667 0.00 0.00 0.00 5.34
4576 5830 2.050351 CGGTCAGTTCTCGTGCGT 60.050 61.111 0.00 0.00 0.00 5.24
4577 5831 1.208358 CGGTCAGTTCTCGTGCGTA 59.792 57.895 0.00 0.00 0.00 4.42
4578 5832 0.179171 CGGTCAGTTCTCGTGCGTAT 60.179 55.000 0.00 0.00 0.00 3.06
4580 5834 1.654105 GGTCAGTTCTCGTGCGTATTG 59.346 52.381 0.00 0.00 0.00 1.90
4589 5844 0.446222 CGTGCGTATTGGTTTCAGGG 59.554 55.000 0.00 0.00 0.00 4.45
4599 5854 2.461695 TGGTTTCAGGGTTTTTCTGCA 58.538 42.857 0.00 0.00 32.63 4.41
4600 5855 2.834549 TGGTTTCAGGGTTTTTCTGCAA 59.165 40.909 0.00 0.00 32.63 4.08
4601 5856 3.194861 GGTTTCAGGGTTTTTCTGCAAC 58.805 45.455 0.00 0.00 37.55 4.17
4607 5862 2.166254 AGGGTTTTTCTGCAACTGTGTG 59.834 45.455 0.00 0.00 0.00 3.82
4608 5863 2.094234 GGGTTTTTCTGCAACTGTGTGT 60.094 45.455 0.00 0.00 0.00 3.72
4611 5866 0.098552 TTTCTGCAACTGTGTGTGCG 59.901 50.000 0.00 0.00 0.00 5.34
4624 5879 1.234821 GTGTGCGAAGGGTGATGAAA 58.765 50.000 0.00 0.00 0.00 2.69
4626 5881 2.034053 GTGTGCGAAGGGTGATGAAAAA 59.966 45.455 0.00 0.00 0.00 1.94
4657 5912 0.107165 GGGGAGCAGGTGTATGAACC 60.107 60.000 0.00 0.00 40.85 3.62
4668 5923 1.287425 GTATGAACCGGCGAAGGAAG 58.713 55.000 9.30 0.00 34.73 3.46
4671 5926 0.323629 TGAACCGGCGAAGGAAGATT 59.676 50.000 9.30 0.00 34.73 2.40
4672 5927 1.007580 GAACCGGCGAAGGAAGATTC 58.992 55.000 9.30 0.00 34.73 2.52
4700 5955 3.407443 AAAAACCGGCGAAGGAAGA 57.593 47.368 9.30 0.00 34.73 2.87
4701 5956 1.905637 AAAAACCGGCGAAGGAAGAT 58.094 45.000 9.30 0.00 34.73 2.40
4702 5957 1.905637 AAAACCGGCGAAGGAAGATT 58.094 45.000 9.30 0.00 34.73 2.40
4703 5958 1.165270 AAACCGGCGAAGGAAGATTG 58.835 50.000 9.30 0.00 34.73 2.67
4704 5959 0.036306 AACCGGCGAAGGAAGATTGT 59.964 50.000 9.30 0.00 34.73 2.71
4705 5960 0.391263 ACCGGCGAAGGAAGATTGTC 60.391 55.000 9.30 0.00 34.73 3.18
4706 5961 0.391130 CCGGCGAAGGAAGATTGTCA 60.391 55.000 9.30 0.00 0.00 3.58
4707 5962 1.002366 CGGCGAAGGAAGATTGTCAG 58.998 55.000 0.00 0.00 0.00 3.51
4708 5963 1.404181 CGGCGAAGGAAGATTGTCAGA 60.404 52.381 0.00 0.00 0.00 3.27
4709 5964 2.275318 GGCGAAGGAAGATTGTCAGAG 58.725 52.381 0.00 0.00 0.00 3.35
4721 5976 0.112606 TGTCAGAGGAAGGAGGACGT 59.887 55.000 0.00 0.00 0.00 4.34
4738 5993 4.717280 AGGACGTAAGAGAGGAAATGGAAT 59.283 41.667 0.00 0.00 43.62 3.01
4744 5999 6.183360 CGTAAGAGAGGAAATGGAATGTTTCC 60.183 42.308 9.10 9.10 46.91 3.13
4806 8189 6.211515 ACTCAAAATCTCAAACACTTGCATC 58.788 36.000 0.00 0.00 32.14 3.91
4829 8212 9.591792 CATCTCTAACTTCACAACATAGAATGA 57.408 33.333 0.00 0.00 0.00 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.473520 CCAGCCCTACAGGTGCCG 62.474 72.222 5.44 0.00 38.26 5.69
1 2 3.330720 ACCAGCCCTACAGGTGCC 61.331 66.667 5.44 0.00 36.66 5.01
27 28 3.781770 CTCGCACATCCGCTCCTCC 62.782 68.421 0.00 0.00 0.00 4.30
28 29 2.279120 CTCGCACATCCGCTCCTC 60.279 66.667 0.00 0.00 0.00 3.71
29 30 3.842923 CCTCGCACATCCGCTCCT 61.843 66.667 0.00 0.00 0.00 3.69
30 31 3.838271 TCCTCGCACATCCGCTCC 61.838 66.667 0.00 0.00 0.00 4.70
31 32 2.583593 GTCCTCGCACATCCGCTC 60.584 66.667 0.00 0.00 0.00 5.03
32 33 4.148825 GGTCCTCGCACATCCGCT 62.149 66.667 0.00 0.00 0.00 5.52
34 35 4.873129 CCGGTCCTCGCACATCCG 62.873 72.222 0.00 0.00 40.72 4.18
35 36 3.432051 CTCCGGTCCTCGCACATCC 62.432 68.421 0.00 0.00 37.59 3.51
36 37 1.945354 TTCTCCGGTCCTCGCACATC 61.945 60.000 0.00 0.00 37.59 3.06
37 38 1.949847 CTTCTCCGGTCCTCGCACAT 61.950 60.000 0.00 0.00 37.59 3.21
38 39 2.599281 TTCTCCGGTCCTCGCACA 60.599 61.111 0.00 0.00 37.59 4.57
39 40 2.182030 CTTCTCCGGTCCTCGCAC 59.818 66.667 0.00 0.00 37.59 5.34
40 41 3.068691 CCTTCTCCGGTCCTCGCA 61.069 66.667 0.00 0.00 37.59 5.10
41 42 3.069318 ACCTTCTCCGGTCCTCGC 61.069 66.667 0.00 0.00 37.59 5.03
42 43 2.711922 CCACCTTCTCCGGTCCTCG 61.712 68.421 0.00 0.00 34.29 4.63
43 44 2.359967 CCCACCTTCTCCGGTCCTC 61.360 68.421 0.00 0.00 34.29 3.71
44 45 2.284699 CCCACCTTCTCCGGTCCT 60.285 66.667 0.00 0.00 34.29 3.85
45 46 3.400054 CCCCACCTTCTCCGGTCC 61.400 72.222 0.00 0.00 34.29 4.46
46 47 1.272554 ATTCCCCACCTTCTCCGGTC 61.273 60.000 0.00 0.00 34.29 4.79
47 48 1.229853 ATTCCCCACCTTCTCCGGT 60.230 57.895 0.00 0.00 37.93 5.28
48 49 1.224592 CATTCCCCACCTTCTCCGG 59.775 63.158 0.00 0.00 0.00 5.14
49 50 1.224592 CCATTCCCCACCTTCTCCG 59.775 63.158 0.00 0.00 0.00 4.63
50 51 1.615262 CCCATTCCCCACCTTCTCC 59.385 63.158 0.00 0.00 0.00 3.71
51 52 1.214992 ACCCCATTCCCCACCTTCTC 61.215 60.000 0.00 0.00 0.00 2.87
52 53 1.151361 ACCCCATTCCCCACCTTCT 60.151 57.895 0.00 0.00 0.00 2.85
53 54 1.000359 CACCCCATTCCCCACCTTC 60.000 63.158 0.00 0.00 0.00 3.46
54 55 3.190349 CACCCCATTCCCCACCTT 58.810 61.111 0.00 0.00 0.00 3.50
55 56 3.672503 GCACCCCATTCCCCACCT 61.673 66.667 0.00 0.00 0.00 4.00
59 60 4.506255 CTCCGCACCCCATTCCCC 62.506 72.222 0.00 0.00 0.00 4.81
60 61 3.728373 ACTCCGCACCCCATTCCC 61.728 66.667 0.00 0.00 0.00 3.97
61 62 2.438434 CACTCCGCACCCCATTCC 60.438 66.667 0.00 0.00 0.00 3.01
62 63 3.134127 GCACTCCGCACCCCATTC 61.134 66.667 0.00 0.00 41.79 2.67
68 69 4.803426 CTCTCCGCACTCCGCACC 62.803 72.222 0.00 0.00 42.60 5.01
69 70 4.803426 CCTCTCCGCACTCCGCAC 62.803 72.222 0.00 0.00 42.60 5.34
117 118 1.142748 GACGAGGGACAGCAGGATG 59.857 63.158 0.00 0.00 40.87 3.51
118 119 1.000993 AGACGAGGGACAGCAGGAT 59.999 57.895 0.00 0.00 0.00 3.24
119 120 1.679305 GAGACGAGGGACAGCAGGA 60.679 63.158 0.00 0.00 0.00 3.86
120 121 1.254284 AAGAGACGAGGGACAGCAGG 61.254 60.000 0.00 0.00 0.00 4.85
121 122 0.172352 GAAGAGACGAGGGACAGCAG 59.828 60.000 0.00 0.00 0.00 4.24
122 123 1.251527 GGAAGAGACGAGGGACAGCA 61.252 60.000 0.00 0.00 0.00 4.41
123 124 1.513622 GGAAGAGACGAGGGACAGC 59.486 63.158 0.00 0.00 0.00 4.40
124 125 0.323908 AGGGAAGAGACGAGGGACAG 60.324 60.000 0.00 0.00 0.00 3.51
125 126 0.114560 AAGGGAAGAGACGAGGGACA 59.885 55.000 0.00 0.00 0.00 4.02
126 127 0.533032 CAAGGGAAGAGACGAGGGAC 59.467 60.000 0.00 0.00 0.00 4.46
127 128 0.114560 ACAAGGGAAGAGACGAGGGA 59.885 55.000 0.00 0.00 0.00 4.20
128 129 0.247736 CACAAGGGAAGAGACGAGGG 59.752 60.000 0.00 0.00 0.00 4.30
129 130 0.390472 GCACAAGGGAAGAGACGAGG 60.390 60.000 0.00 0.00 0.00 4.63
130 131 0.734253 CGCACAAGGGAAGAGACGAG 60.734 60.000 0.00 0.00 0.00 4.18
131 132 1.289066 CGCACAAGGGAAGAGACGA 59.711 57.895 0.00 0.00 0.00 4.20
132 133 1.738099 CCGCACAAGGGAAGAGACG 60.738 63.158 0.00 0.00 0.00 4.18
133 134 2.035442 GCCGCACAAGGGAAGAGAC 61.035 63.158 0.00 0.00 0.00 3.36
134 135 2.347490 GCCGCACAAGGGAAGAGA 59.653 61.111 0.00 0.00 0.00 3.10
135 136 3.121030 CGCCGCACAAGGGAAGAG 61.121 66.667 0.00 0.00 0.00 2.85
136 137 4.697756 CCGCCGCACAAGGGAAGA 62.698 66.667 0.00 0.00 0.00 2.87
150 151 4.770874 TCCGCAAACCCTAGCCGC 62.771 66.667 0.00 0.00 0.00 6.53
151 152 2.511600 CTCCGCAAACCCTAGCCG 60.512 66.667 0.00 0.00 0.00 5.52
152 153 2.124695 CCTCCGCAAACCCTAGCC 60.125 66.667 0.00 0.00 0.00 3.93
153 154 2.124695 CCCTCCGCAAACCCTAGC 60.125 66.667 0.00 0.00 0.00 3.42
154 155 0.976073 TCTCCCTCCGCAAACCCTAG 60.976 60.000 0.00 0.00 0.00 3.02
155 156 0.976073 CTCTCCCTCCGCAAACCCTA 60.976 60.000 0.00 0.00 0.00 3.53
156 157 2.203938 TCTCCCTCCGCAAACCCT 60.204 61.111 0.00 0.00 0.00 4.34
157 158 2.269241 CTCTCCCTCCGCAAACCC 59.731 66.667 0.00 0.00 0.00 4.11
158 159 2.436824 GCTCTCCCTCCGCAAACC 60.437 66.667 0.00 0.00 0.00 3.27
159 160 1.743252 CTGCTCTCCCTCCGCAAAC 60.743 63.158 0.00 0.00 32.66 2.93
160 161 2.665000 CTGCTCTCCCTCCGCAAA 59.335 61.111 0.00 0.00 32.66 3.68
161 162 4.087892 GCTGCTCTCCCTCCGCAA 62.088 66.667 0.00 0.00 32.66 4.85
164 165 3.535962 GAGGCTGCTCTCCCTCCG 61.536 72.222 0.00 0.00 41.42 4.63
165 166 3.535962 CGAGGCTGCTCTCCCTCC 61.536 72.222 0.00 0.00 43.78 4.30
166 167 1.893919 AAACGAGGCTGCTCTCCCTC 61.894 60.000 0.00 0.00 43.35 4.30
167 168 1.915769 AAACGAGGCTGCTCTCCCT 60.916 57.895 0.00 0.00 0.00 4.20
168 169 1.743252 CAAACGAGGCTGCTCTCCC 60.743 63.158 0.00 0.00 0.00 4.30
169 170 2.394563 GCAAACGAGGCTGCTCTCC 61.395 63.158 0.00 0.00 35.62 3.71
170 171 2.734673 CGCAAACGAGGCTGCTCTC 61.735 63.158 0.00 3.88 43.93 3.20
171 172 2.740055 CGCAAACGAGGCTGCTCT 60.740 61.111 0.00 0.00 43.93 4.09
172 173 4.451652 GCGCAAACGAGGCTGCTC 62.452 66.667 0.30 0.00 43.93 4.26
197 198 1.738099 CACGAACCAGGGAGCGAAG 60.738 63.158 10.48 1.49 0.00 3.79
198 199 2.342279 CACGAACCAGGGAGCGAA 59.658 61.111 10.48 0.00 0.00 4.70
199 200 4.373116 GCACGAACCAGGGAGCGA 62.373 66.667 10.48 0.00 0.00 4.93
201 202 3.665675 ATCGCACGAACCAGGGAGC 62.666 63.158 0.00 0.00 0.00 4.70
202 203 1.811266 CATCGCACGAACCAGGGAG 60.811 63.158 0.00 0.00 0.00 4.30
203 204 2.264480 CATCGCACGAACCAGGGA 59.736 61.111 0.00 0.00 0.00 4.20
204 205 2.819595 CCATCGCACGAACCAGGG 60.820 66.667 0.00 0.00 0.00 4.45
205 206 2.819595 CCCATCGCACGAACCAGG 60.820 66.667 0.00 0.00 0.00 4.45
206 207 1.671054 AACCCATCGCACGAACCAG 60.671 57.895 0.00 0.00 0.00 4.00
207 208 1.963855 CAACCCATCGCACGAACCA 60.964 57.895 0.00 0.00 0.00 3.67
208 209 1.908066 GACAACCCATCGCACGAACC 61.908 60.000 0.00 0.00 0.00 3.62
209 210 1.495951 GACAACCCATCGCACGAAC 59.504 57.895 0.00 0.00 0.00 3.95
210 211 2.024868 CGACAACCCATCGCACGAA 61.025 57.895 0.00 0.00 31.96 3.85
211 212 2.431771 CGACAACCCATCGCACGA 60.432 61.111 0.00 0.00 31.96 4.35
212 213 3.487202 CCGACAACCCATCGCACG 61.487 66.667 0.00 0.00 38.27 5.34
213 214 2.358247 ACCGACAACCCATCGCAC 60.358 61.111 0.00 0.00 38.27 5.34
214 215 2.047655 GACCGACAACCCATCGCA 60.048 61.111 0.00 0.00 38.27 5.10
215 216 2.901051 ATCGACCGACAACCCATCGC 62.901 60.000 0.00 0.00 38.27 4.58
216 217 0.459585 AATCGACCGACAACCCATCG 60.460 55.000 0.00 0.00 39.33 3.84
217 218 1.734163 AAATCGACCGACAACCCATC 58.266 50.000 0.00 0.00 0.00 3.51
218 219 2.194201 AAAATCGACCGACAACCCAT 57.806 45.000 0.00 0.00 0.00 4.00
219 220 1.970092 AAAAATCGACCGACAACCCA 58.030 45.000 0.00 0.00 0.00 4.51
237 238 1.700739 TCCCCTCGCACCTAAGAAAAA 59.299 47.619 0.00 0.00 0.00 1.94
238 239 1.354101 TCCCCTCGCACCTAAGAAAA 58.646 50.000 0.00 0.00 0.00 2.29
239 240 1.485066 GATCCCCTCGCACCTAAGAAA 59.515 52.381 0.00 0.00 0.00 2.52
240 241 1.120530 GATCCCCTCGCACCTAAGAA 58.879 55.000 0.00 0.00 0.00 2.52
241 242 1.107538 CGATCCCCTCGCACCTAAGA 61.108 60.000 0.00 0.00 41.14 2.10
242 243 1.364171 CGATCCCCTCGCACCTAAG 59.636 63.158 0.00 0.00 41.14 2.18
243 244 3.533720 CGATCCCCTCGCACCTAA 58.466 61.111 0.00 0.00 41.14 2.69
251 252 1.437986 CACCTTCGACGATCCCCTC 59.562 63.158 0.00 0.00 0.00 4.30
252 253 2.058595 CCACCTTCGACGATCCCCT 61.059 63.158 0.00 0.00 0.00 4.79
253 254 2.499685 CCACCTTCGACGATCCCC 59.500 66.667 0.00 0.00 0.00 4.81
254 255 2.017559 CTCCCACCTTCGACGATCCC 62.018 65.000 0.00 0.00 0.00 3.85
255 256 1.437986 CTCCCACCTTCGACGATCC 59.562 63.158 0.00 0.00 0.00 3.36
256 257 1.035932 TCCTCCCACCTTCGACGATC 61.036 60.000 0.00 0.00 0.00 3.69
257 258 1.000019 TCCTCCCACCTTCGACGAT 60.000 57.895 0.00 0.00 0.00 3.73
258 259 1.677966 CTCCTCCCACCTTCGACGA 60.678 63.158 0.00 0.00 0.00 4.20
259 260 2.711922 CCTCCTCCCACCTTCGACG 61.712 68.421 0.00 0.00 0.00 5.12
260 261 1.305046 TCCTCCTCCCACCTTCGAC 60.305 63.158 0.00 0.00 0.00 4.20
261 262 1.305046 GTCCTCCTCCCACCTTCGA 60.305 63.158 0.00 0.00 0.00 3.71
262 263 2.711922 CGTCCTCCTCCCACCTTCG 61.712 68.421 0.00 0.00 0.00 3.79
263 264 1.305046 TCGTCCTCCTCCCACCTTC 60.305 63.158 0.00 0.00 0.00 3.46
264 265 1.305381 CTCGTCCTCCTCCCACCTT 60.305 63.158 0.00 0.00 0.00 3.50
265 266 1.801302 TTCTCGTCCTCCTCCCACCT 61.801 60.000 0.00 0.00 0.00 4.00
266 267 0.903454 TTTCTCGTCCTCCTCCCACC 60.903 60.000 0.00 0.00 0.00 4.61
267 268 0.974383 TTTTCTCGTCCTCCTCCCAC 59.026 55.000 0.00 0.00 0.00 4.61
268 269 1.724545 TTTTTCTCGTCCTCCTCCCA 58.275 50.000 0.00 0.00 0.00 4.37
289 290 7.910441 TTTTTCATAGGTTAACCTTCGTAGG 57.090 36.000 31.47 15.69 46.09 3.18
311 312 1.026584 CCACTTTCGTCCGGGTTTTT 58.973 50.000 0.00 0.00 0.00 1.94
312 313 0.107066 ACCACTTTCGTCCGGGTTTT 60.107 50.000 0.00 0.00 0.00 2.43
313 314 0.816421 CACCACTTTCGTCCGGGTTT 60.816 55.000 0.00 0.00 0.00 3.27
314 315 1.227734 CACCACTTTCGTCCGGGTT 60.228 57.895 0.00 0.00 0.00 4.11
315 316 2.424302 CACCACTTTCGTCCGGGT 59.576 61.111 0.00 0.00 0.00 5.28
316 317 2.358247 CCACCACTTTCGTCCGGG 60.358 66.667 0.00 0.00 0.00 5.73
317 318 2.358247 CCCACCACTTTCGTCCGG 60.358 66.667 0.00 0.00 0.00 5.14
318 319 1.666872 GTCCCACCACTTTCGTCCG 60.667 63.158 0.00 0.00 0.00 4.79
319 320 1.666872 CGTCCCACCACTTTCGTCC 60.667 63.158 0.00 0.00 0.00 4.79
320 321 0.249573 TTCGTCCCACCACTTTCGTC 60.250 55.000 0.00 0.00 0.00 4.20
321 322 0.178533 TTTCGTCCCACCACTTTCGT 59.821 50.000 0.00 0.00 0.00 3.85
322 323 1.301423 TTTTCGTCCCACCACTTTCG 58.699 50.000 0.00 0.00 0.00 3.46
323 324 3.316868 TCAATTTTCGTCCCACCACTTTC 59.683 43.478 0.00 0.00 0.00 2.62
324 325 3.067601 GTCAATTTTCGTCCCACCACTTT 59.932 43.478 0.00 0.00 0.00 2.66
325 326 2.621526 GTCAATTTTCGTCCCACCACTT 59.378 45.455 0.00 0.00 0.00 3.16
326 327 2.227194 GTCAATTTTCGTCCCACCACT 58.773 47.619 0.00 0.00 0.00 4.00
327 328 1.268625 GGTCAATTTTCGTCCCACCAC 59.731 52.381 0.00 0.00 0.00 4.16
328 329 1.611519 GGTCAATTTTCGTCCCACCA 58.388 50.000 0.00 0.00 0.00 4.17
329 330 0.519961 CGGTCAATTTTCGTCCCACC 59.480 55.000 0.00 0.00 0.00 4.61
330 331 0.519961 CCGGTCAATTTTCGTCCCAC 59.480 55.000 0.00 0.00 0.00 4.61
331 332 1.238625 GCCGGTCAATTTTCGTCCCA 61.239 55.000 1.90 0.00 0.00 4.37
332 333 1.504900 GCCGGTCAATTTTCGTCCC 59.495 57.895 1.90 0.00 0.00 4.46
333 334 1.133869 CGCCGGTCAATTTTCGTCC 59.866 57.895 1.90 0.00 0.00 4.79
334 335 1.133869 CCGCCGGTCAATTTTCGTC 59.866 57.895 1.90 0.00 0.00 4.20
335 336 0.885596 TTCCGCCGGTCAATTTTCGT 60.886 50.000 1.63 0.00 0.00 3.85
336 337 0.238817 TTTCCGCCGGTCAATTTTCG 59.761 50.000 1.63 0.00 0.00 3.46
337 338 1.268625 AGTTTCCGCCGGTCAATTTTC 59.731 47.619 1.63 0.00 0.00 2.29
338 339 1.324383 AGTTTCCGCCGGTCAATTTT 58.676 45.000 1.63 0.00 0.00 1.82
339 340 1.808343 GTAGTTTCCGCCGGTCAATTT 59.192 47.619 1.63 0.00 0.00 1.82
340 341 1.445871 GTAGTTTCCGCCGGTCAATT 58.554 50.000 1.63 0.00 0.00 2.32
341 342 0.392060 GGTAGTTTCCGCCGGTCAAT 60.392 55.000 1.63 0.00 0.00 2.57
342 343 1.004679 GGTAGTTTCCGCCGGTCAA 60.005 57.895 1.63 0.00 0.00 3.18
343 344 1.756408 TTGGTAGTTTCCGCCGGTCA 61.756 55.000 1.63 0.00 0.00 4.02
344 345 1.004679 TTGGTAGTTTCCGCCGGTC 60.005 57.895 1.63 0.00 0.00 4.79
345 346 1.301953 GTTGGTAGTTTCCGCCGGT 60.302 57.895 1.63 0.00 0.00 5.28
346 347 1.004200 AGTTGGTAGTTTCCGCCGG 60.004 57.895 0.00 0.00 0.00 6.13
347 348 1.908066 GCAGTTGGTAGTTTCCGCCG 61.908 60.000 0.00 0.00 0.00 6.46
348 349 0.605589 AGCAGTTGGTAGTTTCCGCC 60.606 55.000 0.00 0.00 0.00 6.13
349 350 1.197036 GAAGCAGTTGGTAGTTTCCGC 59.803 52.381 0.00 0.00 0.00 5.54
350 351 2.489971 TGAAGCAGTTGGTAGTTTCCG 58.510 47.619 0.00 0.00 0.00 4.30
351 352 5.123979 CCTAATGAAGCAGTTGGTAGTTTCC 59.876 44.000 0.00 0.00 0.00 3.13
352 353 5.938125 TCCTAATGAAGCAGTTGGTAGTTTC 59.062 40.000 0.00 0.00 0.00 2.78
353 354 5.876357 TCCTAATGAAGCAGTTGGTAGTTT 58.124 37.500 0.00 0.00 0.00 2.66
354 355 5.013183 ACTCCTAATGAAGCAGTTGGTAGTT 59.987 40.000 0.00 0.00 0.00 2.24
355 356 4.532521 ACTCCTAATGAAGCAGTTGGTAGT 59.467 41.667 0.00 0.00 0.00 2.73
356 357 5.091261 ACTCCTAATGAAGCAGTTGGTAG 57.909 43.478 0.00 0.00 0.00 3.18
357 358 5.955959 TCTACTCCTAATGAAGCAGTTGGTA 59.044 40.000 0.00 0.00 0.00 3.25
358 359 4.777896 TCTACTCCTAATGAAGCAGTTGGT 59.222 41.667 0.00 0.00 0.00 3.67
359 360 5.127845 TCTCTACTCCTAATGAAGCAGTTGG 59.872 44.000 0.00 0.00 0.00 3.77
360 361 6.214191 TCTCTACTCCTAATGAAGCAGTTG 57.786 41.667 0.00 0.00 0.00 3.16
361 362 6.859112 TTCTCTACTCCTAATGAAGCAGTT 57.141 37.500 0.00 0.00 0.00 3.16
362 363 6.859112 TTTCTCTACTCCTAATGAAGCAGT 57.141 37.500 0.00 0.00 0.00 4.40
363 364 7.201478 CGTTTTTCTCTACTCCTAATGAAGCAG 60.201 40.741 0.00 0.00 0.00 4.24
364 365 6.590292 CGTTTTTCTCTACTCCTAATGAAGCA 59.410 38.462 0.00 0.00 0.00 3.91
365 366 6.036191 CCGTTTTTCTCTACTCCTAATGAAGC 59.964 42.308 0.00 0.00 0.00 3.86
366 367 7.097834 ACCGTTTTTCTCTACTCCTAATGAAG 58.902 38.462 0.00 0.00 0.00 3.02
367 368 7.001099 ACCGTTTTTCTCTACTCCTAATGAA 57.999 36.000 0.00 0.00 0.00 2.57
368 369 6.600882 ACCGTTTTTCTCTACTCCTAATGA 57.399 37.500 0.00 0.00 0.00 2.57
369 370 6.872020 TGAACCGTTTTTCTCTACTCCTAATG 59.128 38.462 0.00 0.00 0.00 1.90
370 371 7.001099 TGAACCGTTTTTCTCTACTCCTAAT 57.999 36.000 0.00 0.00 0.00 1.73
371 372 6.409524 TGAACCGTTTTTCTCTACTCCTAA 57.590 37.500 0.00 0.00 0.00 2.69
372 373 6.409524 TTGAACCGTTTTTCTCTACTCCTA 57.590 37.500 0.00 0.00 0.00 2.94
373 374 4.950205 TGAACCGTTTTTCTCTACTCCT 57.050 40.909 0.00 0.00 0.00 3.69
374 375 5.996669 TTTGAACCGTTTTTCTCTACTCC 57.003 39.130 0.00 0.00 0.00 3.85
375 376 7.378728 CCAATTTTGAACCGTTTTTCTCTACTC 59.621 37.037 0.00 0.00 0.00 2.59
376 377 7.067737 TCCAATTTTGAACCGTTTTTCTCTACT 59.932 33.333 0.00 0.00 0.00 2.57
377 378 7.166970 GTCCAATTTTGAACCGTTTTTCTCTAC 59.833 37.037 0.00 0.00 0.00 2.59
378 379 7.197703 GTCCAATTTTGAACCGTTTTTCTCTA 58.802 34.615 0.00 0.00 0.00 2.43
379 380 6.040247 GTCCAATTTTGAACCGTTTTTCTCT 58.960 36.000 0.00 0.00 0.00 3.10
380 381 5.051973 CGTCCAATTTTGAACCGTTTTTCTC 60.052 40.000 0.00 0.00 0.00 2.87
381 382 4.801516 CGTCCAATTTTGAACCGTTTTTCT 59.198 37.500 0.00 0.00 0.00 2.52
382 383 4.549298 GCGTCCAATTTTGAACCGTTTTTC 60.549 41.667 0.00 0.00 0.00 2.29
383 384 3.307512 GCGTCCAATTTTGAACCGTTTTT 59.692 39.130 0.00 0.00 0.00 1.94
384 385 2.861335 GCGTCCAATTTTGAACCGTTTT 59.139 40.909 0.00 0.00 0.00 2.43
385 386 2.159226 TGCGTCCAATTTTGAACCGTTT 60.159 40.909 0.00 0.00 0.00 3.60
386 387 1.405821 TGCGTCCAATTTTGAACCGTT 59.594 42.857 0.00 0.00 0.00 4.44
387 388 1.025812 TGCGTCCAATTTTGAACCGT 58.974 45.000 0.00 0.00 0.00 4.83
388 389 1.984990 CATGCGTCCAATTTTGAACCG 59.015 47.619 0.00 0.00 0.00 4.44
389 390 2.288763 ACCATGCGTCCAATTTTGAACC 60.289 45.455 0.00 0.00 0.00 3.62
390 391 3.025287 ACCATGCGTCCAATTTTGAAC 57.975 42.857 0.00 0.00 0.00 3.18
391 392 3.742433 AACCATGCGTCCAATTTTGAA 57.258 38.095 0.00 0.00 0.00 2.69
392 393 3.742433 AAACCATGCGTCCAATTTTGA 57.258 38.095 0.00 0.00 0.00 2.69
393 394 5.226396 TCTTAAACCATGCGTCCAATTTTG 58.774 37.500 0.00 0.00 0.00 2.44
394 395 5.242838 TCTCTTAAACCATGCGTCCAATTTT 59.757 36.000 0.00 0.00 0.00 1.82
395 396 4.764823 TCTCTTAAACCATGCGTCCAATTT 59.235 37.500 0.00 0.00 0.00 1.82
396 397 4.331968 TCTCTTAAACCATGCGTCCAATT 58.668 39.130 0.00 0.00 0.00 2.32
397 398 3.950397 TCTCTTAAACCATGCGTCCAAT 58.050 40.909 0.00 0.00 0.00 3.16
398 399 3.410631 TCTCTTAAACCATGCGTCCAA 57.589 42.857 0.00 0.00 0.00 3.53
399 400 3.627395 ATCTCTTAAACCATGCGTCCA 57.373 42.857 0.00 0.00 0.00 4.02
400 401 5.357257 TCTTATCTCTTAAACCATGCGTCC 58.643 41.667 0.00 0.00 0.00 4.79
401 402 6.701841 TCATCTTATCTCTTAAACCATGCGTC 59.298 38.462 0.00 0.00 0.00 5.19
402 403 6.582636 TCATCTTATCTCTTAAACCATGCGT 58.417 36.000 0.00 0.00 0.00 5.24
403 404 7.664082 ATCATCTTATCTCTTAAACCATGCG 57.336 36.000 0.00 0.00 0.00 4.73
404 405 9.674824 CAAATCATCTTATCTCTTAAACCATGC 57.325 33.333 0.00 0.00 0.00 4.06
420 421 9.825972 CGTACAGTTGTTTATTCAAATCATCTT 57.174 29.630 0.00 0.00 0.00 2.40
421 422 9.214957 TCGTACAGTTGTTTATTCAAATCATCT 57.785 29.630 0.00 0.00 0.00 2.90
422 423 9.820229 TTCGTACAGTTGTTTATTCAAATCATC 57.180 29.630 0.00 0.00 0.00 2.92
450 451 9.701355 CACTTGTCGCATTTTAAAAATTTCTTT 57.299 25.926 4.44 0.00 0.00 2.52
451 452 9.092876 TCACTTGTCGCATTTTAAAAATTTCTT 57.907 25.926 4.44 0.00 0.00 2.52
452 453 8.539674 GTCACTTGTCGCATTTTAAAAATTTCT 58.460 29.630 4.44 0.00 0.00 2.52
453 454 7.522555 CGTCACTTGTCGCATTTTAAAAATTTC 59.477 33.333 4.44 0.00 0.00 2.17
454 455 7.334009 CGTCACTTGTCGCATTTTAAAAATTT 58.666 30.769 4.44 0.00 0.00 1.82
455 456 6.862194 CGTCACTTGTCGCATTTTAAAAATT 58.138 32.000 4.44 0.00 0.00 1.82
456 457 6.432802 CGTCACTTGTCGCATTTTAAAAAT 57.567 33.333 4.44 0.00 0.00 1.82
457 458 5.858159 CGTCACTTGTCGCATTTTAAAAA 57.142 34.783 4.44 0.00 0.00 1.94
467 468 3.777925 ATGCGCGTCACTTGTCGC 61.778 61.111 8.43 10.28 46.08 5.19
468 469 2.094539 CATGCGCGTCACTTGTCG 59.905 61.111 8.43 0.00 0.00 4.35
469 470 2.202222 GCATGCGCGTCACTTGTC 60.202 61.111 8.43 0.00 0.00 3.18
470 471 2.958204 CTGCATGCGCGTCACTTGT 61.958 57.895 14.09 0.00 42.97 3.16
471 472 2.202260 CTGCATGCGCGTCACTTG 60.202 61.111 14.09 3.97 42.97 3.16
472 473 2.666190 ACTGCATGCGCGTCACTT 60.666 55.556 14.09 0.00 42.97 3.16
473 474 3.417224 CACTGCATGCGCGTCACT 61.417 61.111 14.09 0.00 42.97 3.41
474 475 3.358667 CTCACTGCATGCGCGTCAC 62.359 63.158 14.09 0.00 42.97 3.67
475 476 3.113979 CTCACTGCATGCGCGTCA 61.114 61.111 14.09 6.86 42.97 4.35
476 477 4.511443 GCTCACTGCATGCGCGTC 62.511 66.667 14.09 0.00 42.97 5.19
479 480 2.552585 AAATGGCTCACTGCATGCGC 62.553 55.000 14.09 9.65 45.15 6.09
480 481 0.108992 AAAATGGCTCACTGCATGCG 60.109 50.000 14.09 10.50 45.15 4.73
481 482 1.636988 GAAAATGGCTCACTGCATGC 58.363 50.000 11.82 11.82 45.15 4.06
482 483 1.904144 CGAAAATGGCTCACTGCATG 58.096 50.000 0.00 0.00 45.15 4.06
483 484 0.171903 GCGAAAATGGCTCACTGCAT 59.828 50.000 0.00 0.00 45.15 3.96
484 485 1.171549 TGCGAAAATGGCTCACTGCA 61.172 50.000 0.00 0.00 45.15 4.41
485 486 0.039256 TTGCGAAAATGGCTCACTGC 60.039 50.000 0.00 0.00 41.94 4.40
486 487 1.666888 GGTTGCGAAAATGGCTCACTG 60.667 52.381 0.00 0.00 0.00 3.66
487 488 0.598065 GGTTGCGAAAATGGCTCACT 59.402 50.000 0.00 0.00 0.00 3.41
488 489 0.598065 AGGTTGCGAAAATGGCTCAC 59.402 50.000 0.00 0.00 0.00 3.51
489 490 0.597568 CAGGTTGCGAAAATGGCTCA 59.402 50.000 0.00 0.00 0.00 4.26
490 491 0.598065 ACAGGTTGCGAAAATGGCTC 59.402 50.000 0.00 0.00 0.00 4.70
491 492 0.314935 CACAGGTTGCGAAAATGGCT 59.685 50.000 0.00 0.00 0.00 4.75
492 493 0.667184 CCACAGGTTGCGAAAATGGC 60.667 55.000 0.00 0.00 0.00 4.40
493 494 0.673437 ACCACAGGTTGCGAAAATGG 59.327 50.000 0.00 0.00 27.29 3.16
494 495 1.602668 CCACCACAGGTTGCGAAAATG 60.603 52.381 0.00 0.00 31.02 2.32
495 496 0.673437 CCACCACAGGTTGCGAAAAT 59.327 50.000 0.00 0.00 31.02 1.82
496 497 1.388065 CCCACCACAGGTTGCGAAAA 61.388 55.000 0.00 0.00 31.02 2.29
497 498 1.826054 CCCACCACAGGTTGCGAAA 60.826 57.895 0.00 0.00 31.02 3.46
498 499 2.203280 CCCACCACAGGTTGCGAA 60.203 61.111 0.00 0.00 31.02 4.70
499 500 3.164977 TCCCACCACAGGTTGCGA 61.165 61.111 0.00 0.00 31.02 5.10
500 501 2.669569 CTCCCACCACAGGTTGCG 60.670 66.667 0.00 0.00 31.02 4.85
501 502 1.302832 CTCTCCCACCACAGGTTGC 60.303 63.158 0.00 0.00 31.02 4.17
502 503 0.764890 TTCTCTCCCACCACAGGTTG 59.235 55.000 0.00 0.00 31.02 3.77
503 504 0.765510 GTTCTCTCCCACCACAGGTT 59.234 55.000 0.00 0.00 31.02 3.50
504 505 0.104934 AGTTCTCTCCCACCACAGGT 60.105 55.000 0.00 0.00 35.62 4.00
505 506 1.059913 AAGTTCTCTCCCACCACAGG 58.940 55.000 0.00 0.00 0.00 4.00
506 507 2.104792 TCAAAGTTCTCTCCCACCACAG 59.895 50.000 0.00 0.00 0.00 3.66
507 508 2.123589 TCAAAGTTCTCTCCCACCACA 58.876 47.619 0.00 0.00 0.00 4.17
508 509 2.930826 TCAAAGTTCTCTCCCACCAC 57.069 50.000 0.00 0.00 0.00 4.16
509 510 3.551846 GTTTCAAAGTTCTCTCCCACCA 58.448 45.455 0.00 0.00 0.00 4.17
510 511 2.548480 CGTTTCAAAGTTCTCTCCCACC 59.452 50.000 0.00 0.00 0.00 4.61
511 512 3.463944 TCGTTTCAAAGTTCTCTCCCAC 58.536 45.455 0.00 0.00 0.00 4.61
512 513 3.134081 ACTCGTTTCAAAGTTCTCTCCCA 59.866 43.478 0.00 0.00 0.00 4.37
513 514 3.729966 ACTCGTTTCAAAGTTCTCTCCC 58.270 45.455 0.00 0.00 0.00 4.30
514 515 7.422878 AATTACTCGTTTCAAAGTTCTCTCC 57.577 36.000 0.00 0.00 0.00 3.71
515 516 9.371333 GAAAATTACTCGTTTCAAAGTTCTCTC 57.629 33.333 0.00 0.00 34.52 3.20
516 517 8.889717 TGAAAATTACTCGTTTCAAAGTTCTCT 58.110 29.630 0.00 0.00 40.00 3.10
517 518 9.498307 TTGAAAATTACTCGTTTCAAAGTTCTC 57.502 29.630 8.65 0.00 45.81 2.87
539 540 9.527157 TGGTACAAGAGGAAATCATTAATTGAA 57.473 29.630 0.00 0.00 33.94 2.69
540 541 8.956426 GTGGTACAAGAGGAAATCATTAATTGA 58.044 33.333 0.00 0.00 44.16 2.57
541 542 8.960591 AGTGGTACAAGAGGAAATCATTAATTG 58.039 33.333 0.00 0.00 44.16 2.32
545 546 9.444600 GTTTAGTGGTACAAGAGGAAATCATTA 57.555 33.333 0.00 0.00 44.16 1.90
546 547 7.119262 CGTTTAGTGGTACAAGAGGAAATCATT 59.881 37.037 0.00 0.00 44.16 2.57
547 548 6.594159 CGTTTAGTGGTACAAGAGGAAATCAT 59.406 38.462 0.00 0.00 44.16 2.45
548 549 5.929992 CGTTTAGTGGTACAAGAGGAAATCA 59.070 40.000 0.00 0.00 44.16 2.57
549 550 6.161381 TCGTTTAGTGGTACAAGAGGAAATC 58.839 40.000 0.00 0.00 44.16 2.17
550 551 6.105397 TCGTTTAGTGGTACAAGAGGAAAT 57.895 37.500 0.00 0.00 44.16 2.17
551 552 5.534207 TCGTTTAGTGGTACAAGAGGAAA 57.466 39.130 0.00 0.00 44.16 3.13
552 553 4.560108 GCTCGTTTAGTGGTACAAGAGGAA 60.560 45.833 0.00 0.00 44.16 3.36
553 554 3.057033 GCTCGTTTAGTGGTACAAGAGGA 60.057 47.826 0.00 0.00 44.16 3.71
554 555 3.251571 GCTCGTTTAGTGGTACAAGAGG 58.748 50.000 0.00 0.00 44.16 3.69
555 556 3.909430 TGCTCGTTTAGTGGTACAAGAG 58.091 45.455 0.00 0.00 44.16 2.85
556 557 4.491676 GATGCTCGTTTAGTGGTACAAGA 58.508 43.478 0.00 0.00 44.16 3.02
557 558 3.303495 CGATGCTCGTTTAGTGGTACAAG 59.697 47.826 0.00 0.00 35.69 3.16
558 559 3.247442 CGATGCTCGTTTAGTGGTACAA 58.753 45.455 0.00 0.00 35.69 2.41
559 560 2.871133 CGATGCTCGTTTAGTGGTACA 58.129 47.619 0.00 0.00 34.72 2.90
560 561 1.587034 GCGATGCTCGTTTAGTGGTAC 59.413 52.381 7.27 0.00 42.81 3.34
561 562 1.470285 GGCGATGCTCGTTTAGTGGTA 60.470 52.381 7.27 0.00 42.81 3.25
562 563 0.739813 GGCGATGCTCGTTTAGTGGT 60.740 55.000 7.27 0.00 42.81 4.16
563 564 1.429148 GGGCGATGCTCGTTTAGTGG 61.429 60.000 7.27 0.00 42.81 4.00
564 565 2.006772 GGGCGATGCTCGTTTAGTG 58.993 57.895 7.27 0.00 42.81 2.74
565 566 4.515404 GGGCGATGCTCGTTTAGT 57.485 55.556 7.27 0.00 42.81 2.24
572 573 2.644555 TAGGCTTTCGGGCGATGCTC 62.645 60.000 0.00 0.00 45.89 4.26
573 574 2.252072 TTAGGCTTTCGGGCGATGCT 62.252 55.000 0.00 0.00 45.89 3.79
574 575 1.817941 TTAGGCTTTCGGGCGATGC 60.818 57.895 0.00 0.00 45.89 3.91
575 576 0.462047 AGTTAGGCTTTCGGGCGATG 60.462 55.000 0.00 0.00 45.89 3.84
576 577 0.252197 AAGTTAGGCTTTCGGGCGAT 59.748 50.000 0.00 0.00 45.89 4.58
577 578 0.035739 AAAGTTAGGCTTTCGGGCGA 59.964 50.000 0.00 0.00 43.42 5.54
578 579 0.879090 AAAAGTTAGGCTTTCGGGCG 59.121 50.000 0.00 0.00 45.91 6.13
579 580 2.035449 ACAAAAAGTTAGGCTTTCGGGC 59.965 45.455 0.00 0.00 45.91 6.13
580 581 4.320714 GGTACAAAAAGTTAGGCTTTCGGG 60.321 45.833 0.00 0.00 45.91 5.14
581 582 4.612033 CGGTACAAAAAGTTAGGCTTTCGG 60.612 45.833 0.00 0.00 45.91 4.30
582 583 4.460505 CGGTACAAAAAGTTAGGCTTTCG 58.539 43.478 0.00 0.00 45.91 3.46
583 584 4.790878 CCGGTACAAAAAGTTAGGCTTTC 58.209 43.478 0.00 0.00 45.91 2.62
585 586 2.555325 GCCGGTACAAAAAGTTAGGCTT 59.445 45.455 1.90 0.00 38.74 4.35
586 587 2.156917 GCCGGTACAAAAAGTTAGGCT 58.843 47.619 1.90 0.00 38.74 4.58
587 588 2.156917 AGCCGGTACAAAAAGTTAGGC 58.843 47.619 1.90 0.00 40.67 3.93
588 589 5.235831 GCTATAGCCGGTACAAAAAGTTAGG 59.764 44.000 14.13 0.00 34.31 2.69
589 590 5.813672 TGCTATAGCCGGTACAAAAAGTTAG 59.186 40.000 21.84 0.00 41.18 2.34
590 591 5.732633 TGCTATAGCCGGTACAAAAAGTTA 58.267 37.500 21.84 0.00 41.18 2.24
591 592 4.581868 TGCTATAGCCGGTACAAAAAGTT 58.418 39.130 21.84 0.00 41.18 2.66
592 593 4.210724 TGCTATAGCCGGTACAAAAAGT 57.789 40.909 21.84 0.00 41.18 2.66
593 594 5.751243 ATTGCTATAGCCGGTACAAAAAG 57.249 39.130 21.84 0.00 41.18 2.27
594 595 6.518208 AAATTGCTATAGCCGGTACAAAAA 57.482 33.333 21.84 6.54 41.18 1.94
595 596 7.474190 GTTAAATTGCTATAGCCGGTACAAAA 58.526 34.615 21.84 7.25 41.18 2.44
596 597 6.238157 CGTTAAATTGCTATAGCCGGTACAAA 60.238 38.462 21.84 7.98 41.18 2.83
597 598 5.234757 CGTTAAATTGCTATAGCCGGTACAA 59.765 40.000 21.84 8.70 41.18 2.41
598 599 4.746115 CGTTAAATTGCTATAGCCGGTACA 59.254 41.667 21.84 0.00 41.18 2.90
599 600 4.376717 GCGTTAAATTGCTATAGCCGGTAC 60.377 45.833 21.84 10.97 41.18 3.34
600 601 3.742369 GCGTTAAATTGCTATAGCCGGTA 59.258 43.478 21.84 6.37 41.18 4.02
601 602 2.546789 GCGTTAAATTGCTATAGCCGGT 59.453 45.455 21.84 7.32 41.18 5.28
602 603 2.806244 AGCGTTAAATTGCTATAGCCGG 59.194 45.455 21.84 0.00 40.28 6.13
603 604 5.371629 GTTAGCGTTAAATTGCTATAGCCG 58.628 41.667 21.84 16.01 42.79 5.52
604 605 5.334646 GGGTTAGCGTTAAATTGCTATAGCC 60.335 44.000 21.84 4.84 42.79 3.93
605 606 5.237779 TGGGTTAGCGTTAAATTGCTATAGC 59.762 40.000 18.18 18.18 42.79 2.97
606 607 6.854496 TGGGTTAGCGTTAAATTGCTATAG 57.146 37.500 6.26 0.00 42.79 1.31
607 608 7.627298 TTTGGGTTAGCGTTAAATTGCTATA 57.373 32.000 6.26 0.00 42.79 1.31
608 609 6.518208 TTTGGGTTAGCGTTAAATTGCTAT 57.482 33.333 6.26 0.00 42.79 2.97
609 610 5.961396 TTTGGGTTAGCGTTAAATTGCTA 57.039 34.783 0.00 2.21 42.48 3.49
610 611 4.857509 TTTGGGTTAGCGTTAAATTGCT 57.142 36.364 0.00 3.90 45.04 3.91
611 612 5.224135 TCTTTTGGGTTAGCGTTAAATTGC 58.776 37.500 0.00 0.00 0.00 3.56
612 613 6.144886 GGTTCTTTTGGGTTAGCGTTAAATTG 59.855 38.462 0.00 0.00 0.00 2.32
613 614 6.218019 GGTTCTTTTGGGTTAGCGTTAAATT 58.782 36.000 0.00 0.00 0.00 1.82
614 615 5.563280 CGGTTCTTTTGGGTTAGCGTTAAAT 60.563 40.000 0.00 0.00 0.00 1.40
615 616 4.261114 CGGTTCTTTTGGGTTAGCGTTAAA 60.261 41.667 0.00 0.00 0.00 1.52
616 617 3.250521 CGGTTCTTTTGGGTTAGCGTTAA 59.749 43.478 0.00 0.00 0.00 2.01
617 618 2.807392 CGGTTCTTTTGGGTTAGCGTTA 59.193 45.455 0.00 0.00 0.00 3.18
618 619 1.605232 CGGTTCTTTTGGGTTAGCGTT 59.395 47.619 0.00 0.00 0.00 4.84
619 620 1.232119 CGGTTCTTTTGGGTTAGCGT 58.768 50.000 0.00 0.00 0.00 5.07
620 621 1.232119 ACGGTTCTTTTGGGTTAGCG 58.768 50.000 0.00 0.00 35.99 4.26
621 622 4.834357 TTAACGGTTCTTTTGGGTTAGC 57.166 40.909 0.00 0.00 0.00 3.09
622 623 6.376177 GTCATTAACGGTTCTTTTGGGTTAG 58.624 40.000 0.00 0.00 0.00 2.34
623 624 5.241285 GGTCATTAACGGTTCTTTTGGGTTA 59.759 40.000 0.00 0.00 0.00 2.85
624 625 4.038282 GGTCATTAACGGTTCTTTTGGGTT 59.962 41.667 0.00 0.00 0.00 4.11
625 626 3.570975 GGTCATTAACGGTTCTTTTGGGT 59.429 43.478 0.00 0.00 0.00 4.51
626 627 3.824443 AGGTCATTAACGGTTCTTTTGGG 59.176 43.478 0.00 0.00 0.00 4.12
627 628 6.563222 TTAGGTCATTAACGGTTCTTTTGG 57.437 37.500 0.00 0.00 0.00 3.28
628 629 7.027161 CCATTAGGTCATTAACGGTTCTTTTG 58.973 38.462 0.00 0.00 0.00 2.44
629 630 6.943718 TCCATTAGGTCATTAACGGTTCTTTT 59.056 34.615 0.00 0.00 35.89 2.27
630 631 6.373495 GTCCATTAGGTCATTAACGGTTCTTT 59.627 38.462 0.00 0.00 35.89 2.52
631 632 5.878669 GTCCATTAGGTCATTAACGGTTCTT 59.121 40.000 0.00 0.00 35.89 2.52
632 633 5.189145 AGTCCATTAGGTCATTAACGGTTCT 59.811 40.000 0.00 0.00 35.89 3.01
633 634 5.425630 AGTCCATTAGGTCATTAACGGTTC 58.574 41.667 0.00 0.00 35.89 3.62
634 635 5.431179 AGTCCATTAGGTCATTAACGGTT 57.569 39.130 0.00 0.00 35.89 4.44
635 636 6.742559 ATAGTCCATTAGGTCATTAACGGT 57.257 37.500 0.00 0.00 35.89 4.83
636 637 7.331193 GCTAATAGTCCATTAGGTCATTAACGG 59.669 40.741 6.24 0.00 44.37 4.44
637 638 7.061905 CGCTAATAGTCCATTAGGTCATTAACG 59.938 40.741 6.24 0.00 44.37 3.18
638 639 7.148623 GCGCTAATAGTCCATTAGGTCATTAAC 60.149 40.741 0.00 0.00 44.37 2.01
639 640 6.872020 GCGCTAATAGTCCATTAGGTCATTAA 59.128 38.462 0.00 0.00 44.37 1.40
640 641 6.210784 AGCGCTAATAGTCCATTAGGTCATTA 59.789 38.462 8.99 0.00 44.37 1.90
641 642 5.012148 AGCGCTAATAGTCCATTAGGTCATT 59.988 40.000 8.99 0.00 44.37 2.57
642 643 4.528596 AGCGCTAATAGTCCATTAGGTCAT 59.471 41.667 8.99 0.00 44.37 3.06
643 644 3.895656 AGCGCTAATAGTCCATTAGGTCA 59.104 43.478 8.99 0.00 44.37 4.02
644 645 4.522722 AGCGCTAATAGTCCATTAGGTC 57.477 45.455 8.99 0.00 44.37 3.85
645 646 6.415206 TTTAGCGCTAATAGTCCATTAGGT 57.585 37.500 29.17 0.00 44.37 3.08
646 647 7.907214 ATTTTAGCGCTAATAGTCCATTAGG 57.093 36.000 29.17 0.00 44.37 2.69
647 648 9.599322 CAAATTTTAGCGCTAATAGTCCATTAG 57.401 33.333 29.17 9.20 46.17 1.73
648 649 9.332502 TCAAATTTTAGCGCTAATAGTCCATTA 57.667 29.630 29.17 9.39 0.00 1.90
649 650 8.220755 TCAAATTTTAGCGCTAATAGTCCATT 57.779 30.769 29.17 16.60 0.00 3.16
650 651 7.520614 GCTCAAATTTTAGCGCTAATAGTCCAT 60.521 37.037 29.17 12.27 0.00 3.41
651 652 6.238374 GCTCAAATTTTAGCGCTAATAGTCCA 60.238 38.462 29.17 11.63 0.00 4.02
652 653 6.136743 GCTCAAATTTTAGCGCTAATAGTCC 58.863 40.000 29.17 10.37 0.00 3.85
653 654 6.136743 GGCTCAAATTTTAGCGCTAATAGTC 58.863 40.000 29.17 16.70 39.71 2.59
654 655 5.008712 GGGCTCAAATTTTAGCGCTAATAGT 59.991 40.000 29.17 21.03 45.35 2.12
655 656 5.452777 GGGCTCAAATTTTAGCGCTAATAG 58.547 41.667 29.17 18.83 45.35 1.73
656 657 5.432885 GGGCTCAAATTTTAGCGCTAATA 57.567 39.130 29.17 24.46 45.35 0.98
657 658 4.307443 GGGCTCAAATTTTAGCGCTAAT 57.693 40.909 29.17 14.97 45.35 1.73
658 659 3.775661 GGGCTCAAATTTTAGCGCTAA 57.224 42.857 25.53 25.53 45.35 3.09
662 663 3.865164 GGAATTGGGCTCAAATTTTAGCG 59.135 43.478 16.14 0.00 39.71 4.26
673 674 3.508840 CCGCACGGAATTGGGCTC 61.509 66.667 2.01 0.00 37.50 4.70
773 775 2.504026 CGTCGCTGCTTAGTCGCA 60.504 61.111 0.00 0.00 38.40 5.10
776 778 3.248171 CGCCGTCGCTGCTTAGTC 61.248 66.667 0.00 0.00 0.00 2.59
777 779 3.744719 TCGCCGTCGCTGCTTAGT 61.745 61.111 0.00 0.00 35.26 2.24
778 780 3.248171 GTCGCCGTCGCTGCTTAG 61.248 66.667 0.00 0.00 35.26 2.18
796 798 2.435059 GGAGCGAGTCAACCAGCC 60.435 66.667 0.00 0.00 0.00 4.85
845 847 3.917760 GAGAGGATGTCGCCGGGG 61.918 72.222 13.31 13.31 0.00 5.73
877 879 2.957902 ATAGGGGCCGTCGATGGGAA 62.958 60.000 24.85 0.00 0.00 3.97
906 908 2.754658 GAAGGAGGCGTCGAGGGA 60.755 66.667 7.31 0.00 0.00 4.20
973 976 3.073101 GGGGGCGTCGTAGAAGGT 61.073 66.667 0.00 0.00 39.69 3.50
1022 1025 4.637483 TTGAGAACAAAAGAGTTGCCTG 57.363 40.909 0.00 0.00 32.73 4.85
1029 1032 7.710896 AGAGGACAAATTTGAGAACAAAAGAG 58.289 34.615 24.64 0.00 46.77 2.85
1063 1069 3.779183 AGTGGTCAGTGGATCAATGAGAT 59.221 43.478 0.00 0.00 39.11 2.75
1065 1071 3.623906 AGTGGTCAGTGGATCAATGAG 57.376 47.619 0.00 0.00 39.11 2.90
1074 1080 0.979665 ACATCCTCAGTGGTCAGTGG 59.020 55.000 6.02 0.00 37.07 4.00
1075 1081 3.790091 CATACATCCTCAGTGGTCAGTG 58.210 50.000 0.00 0.00 37.07 3.66
1076 1082 2.169352 GCATACATCCTCAGTGGTCAGT 59.831 50.000 0.00 0.00 37.07 3.41
1077 1083 2.169144 TGCATACATCCTCAGTGGTCAG 59.831 50.000 0.00 0.00 37.07 3.51
1078 1084 2.187100 TGCATACATCCTCAGTGGTCA 58.813 47.619 0.00 0.00 37.07 4.02
1079 1085 2.988010 TGCATACATCCTCAGTGGTC 57.012 50.000 0.00 0.00 37.07 4.02
1080 1086 3.054139 ACAATGCATACATCCTCAGTGGT 60.054 43.478 0.00 0.00 34.62 4.16
1081 1087 3.548770 ACAATGCATACATCCTCAGTGG 58.451 45.455 0.00 0.00 34.62 4.00
1138 1148 6.535150 TGTAATCTTATTCAGAACAAGCTCCG 59.465 38.462 0.00 0.00 34.16 4.63
1163 1173 9.939802 CCTAACCGTATTATAAGCTCCTAAATT 57.060 33.333 0.00 0.00 0.00 1.82
1223 1233 4.978580 CGGGTATCATATATGACATCTGCG 59.021 45.833 17.60 3.28 40.03 5.18
1265 1275 3.414269 CCCTACCGTTTAGCCTCAAAAA 58.586 45.455 0.00 0.00 0.00 1.94
1333 1343 3.103742 CCCTATCCCTCTCTCATTAGGC 58.896 54.545 0.00 0.00 0.00 3.93
1345 1355 0.331646 ACCCTACCTCCCCTATCCCT 60.332 60.000 0.00 0.00 0.00 4.20
1364 1374 0.036010 GCTACTTCTGGCTGCTGGAA 60.036 55.000 0.00 3.82 0.00 3.53
1454 1464 4.739716 CGTAAACTTTCAAGCAGCAACAAT 59.260 37.500 0.00 0.00 0.00 2.71
1572 1584 4.156008 GGCTAGAAATCGAAAAGGCAAGAA 59.844 41.667 0.00 0.00 33.30 2.52
1754 1770 3.603158 TCTACTGCGCAGATTAACCAA 57.397 42.857 42.03 15.64 0.00 3.67
1755 1771 3.457234 CATCTACTGCGCAGATTAACCA 58.543 45.455 42.03 18.42 30.18 3.67
1807 1827 7.144661 TGAACAGAAATCATGCACGTTTTATT 58.855 30.769 0.00 0.00 0.00 1.40
1813 1833 2.095567 GCTGAACAGAAATCATGCACGT 60.096 45.455 5.97 0.00 0.00 4.49
1857 1880 4.912395 GCACAACCACTGCCCCCA 62.912 66.667 0.00 0.00 0.00 4.96
1889 1933 1.590238 CGAGCAGAAAGATAGCCAACG 59.410 52.381 0.00 0.00 0.00 4.10
1890 1934 2.605366 GACGAGCAGAAAGATAGCCAAC 59.395 50.000 0.00 0.00 0.00 3.77
1918 1962 7.676947 TGCCACTAAATATCTATTAGACACCC 58.323 38.462 0.00 0.00 35.00 4.61
1921 1965 8.418662 ACGTTGCCACTAAATATCTATTAGACA 58.581 33.333 0.00 0.00 35.00 3.41
2027 2458 1.781555 CAAGAGTTGCTACGTGGCG 59.218 57.895 19.46 0.00 34.52 5.69
2056 2487 6.251376 CGGCTAGTCAAACATTTCAATTAAGC 59.749 38.462 0.00 0.00 0.00 3.09
2075 2506 3.929094 TGTTTACTAACCAACCGGCTAG 58.071 45.455 0.00 0.00 37.06 3.42
2128 2661 1.156736 GCCTGCGTCTGTTTGTACAT 58.843 50.000 0.00 0.00 32.86 2.29
2142 2720 3.417185 CGAAAAATAAGAACGAGCCTGC 58.583 45.455 0.00 0.00 0.00 4.85
2159 2737 3.462483 TGAGTTGGTTAGTCAGCGAAA 57.538 42.857 0.00 0.00 32.40 3.46
2252 2830 7.870509 AAATGAAGTGAGCTTAGCAATATCA 57.129 32.000 7.07 4.69 34.61 2.15
2367 2951 4.441634 GGCGATAGAAGCAAGTCCTTTCTA 60.442 45.833 0.00 0.00 39.76 2.10
2411 2995 3.864789 AGCCTAACCTTGGGATATGTG 57.135 47.619 0.00 0.00 0.00 3.21
2448 3032 7.484140 AGGAACTAAAAGCTATTTATGCTTGC 58.516 34.615 1.63 0.00 43.71 4.01
2481 3065 2.227194 AGAAACGCCCTGGTTAAAGTG 58.773 47.619 0.00 0.00 0.00 3.16
2594 3251 5.411361 GCATGTTAGTTCACCACATTAGTCA 59.589 40.000 0.00 0.00 0.00 3.41
2597 3254 5.065218 GGAGCATGTTAGTTCACCACATTAG 59.935 44.000 0.00 0.00 0.00 1.73
2604 3261 2.489938 TGGGAGCATGTTAGTTCACC 57.510 50.000 0.00 0.00 0.00 4.02
2611 3268 5.178096 TCTTCTGAAATGGGAGCATGTTA 57.822 39.130 0.00 0.00 0.00 2.41
2736 3398 7.750229 TCAAAGATTAGACAGTTTGCAGATT 57.250 32.000 0.00 0.00 31.29 2.40
2881 3756 7.246674 ACAGCAATCCTTACAAATATGTACG 57.753 36.000 0.00 0.00 41.64 3.67
2993 3868 5.427036 TCGTTCAGGAATGTAAAAACACC 57.573 39.130 1.52 0.00 0.00 4.16
3340 4228 3.118408 ACAAGTAGAACTCTGGTGTGCAA 60.118 43.478 0.00 0.00 0.00 4.08
3377 4265 3.534554 TCATGAACATCCGAGTTGATGG 58.465 45.455 12.10 0.00 45.16 3.51
3434 4322 3.249799 CACAACGTGATACAAGAAAGCCA 59.750 43.478 0.00 0.00 35.23 4.75
3469 4357 7.450014 TCATCCTGGCACAAAGTTTAGATAAAA 59.550 33.333 0.00 0.00 38.70 1.52
3608 4497 2.230508 TGAGTAAGAGCACAGGGTAACG 59.769 50.000 0.00 0.00 37.60 3.18
3778 4829 7.404671 ACACTACAGGAACAGAAAACAATTT 57.595 32.000 0.00 0.00 0.00 1.82
3805 4856 1.228337 TGCCACTTGATGCTGCACT 60.228 52.632 3.57 0.00 0.00 4.40
3832 4883 7.558161 TTGCTGATGATATTACTGGTTTGAG 57.442 36.000 0.00 0.00 0.00 3.02
3872 4923 1.071385 AGTACTGCTTGCTCAGTTGCT 59.929 47.619 11.01 8.05 44.26 3.91
3925 4976 9.099454 GTACACTAGCTAAGTCTATTGCAAATT 57.901 33.333 1.71 0.00 35.76 1.82
3998 5231 8.833493 GTGTACTTGTATTAGGTGTTTCAGTTT 58.167 33.333 0.00 0.00 0.00 2.66
4121 5355 1.589803 ACGGCAAGTACTGGTTCAAC 58.410 50.000 0.00 0.00 0.00 3.18
4122 5356 3.688694 ATACGGCAAGTACTGGTTCAA 57.311 42.857 0.00 0.00 38.29 2.69
4132 5366 1.120530 CCAGGGACTATACGGCAAGT 58.879 55.000 0.00 0.00 36.02 3.16
4135 5369 1.458777 CCCCAGGGACTATACGGCA 60.459 63.158 7.25 0.00 36.02 5.69
4154 5389 1.689273 GTCATCTTCTATCCAGGGCGT 59.311 52.381 0.00 0.00 0.00 5.68
4159 5394 3.634448 ACTCACCGTCATCTTCTATCCAG 59.366 47.826 0.00 0.00 0.00 3.86
4161 5396 4.231718 GACTCACCGTCATCTTCTATCC 57.768 50.000 0.00 0.00 42.37 2.59
4178 5413 1.098050 GGCCCACAACATCATGACTC 58.902 55.000 0.00 0.00 0.00 3.36
4198 5433 3.936203 GGACCACGGCCTCACACA 61.936 66.667 0.00 0.00 0.00 3.72
4220 5455 0.528466 GCTCATCAAGATCGACGCCA 60.528 55.000 0.00 0.00 0.00 5.69
4224 5459 1.929836 GTGGTGCTCATCAAGATCGAC 59.070 52.381 0.00 0.00 0.00 4.20
4245 5480 2.224867 ACAATGGAGTTTCACCCTGGAG 60.225 50.000 0.00 0.00 0.00 3.86
4250 5485 3.434940 AGGTACAATGGAGTTTCACCC 57.565 47.619 0.00 0.00 0.00 4.61
4257 5492 4.041691 ACAGTTTGCTAGGTACAATGGAGT 59.958 41.667 0.00 0.00 0.00 3.85
4277 5512 3.188492 CTCTGCTGCATGTCTAGAACAG 58.812 50.000 1.31 1.52 42.37 3.16
4282 5517 0.177373 TGCCTCTGCTGCATGTCTAG 59.823 55.000 1.31 0.00 38.71 2.43
4292 5527 2.255406 CCATACTATCCTGCCTCTGCT 58.745 52.381 0.00 0.00 38.71 4.24
4296 5531 3.007398 CCAAGACCATACTATCCTGCCTC 59.993 52.174 0.00 0.00 0.00 4.70
4307 5542 3.695830 TGTCCTCAACCAAGACCATAC 57.304 47.619 0.00 0.00 0.00 2.39
4344 5579 1.392853 CACTGTCTTCTTCATCTGCGC 59.607 52.381 0.00 0.00 0.00 6.09
4345 5580 1.392853 GCACTGTCTTCTTCATCTGCG 59.607 52.381 0.00 0.00 0.00 5.18
4357 5592 1.077212 GCATCCCATGGCACTGTCT 60.077 57.895 6.09 0.00 0.00 3.41
4365 5600 1.152902 ATGGACGTGCATCCCATGG 60.153 57.895 17.64 4.14 39.08 3.66
4387 5622 3.966543 CCACCAAGGAGGGCGGTT 61.967 66.667 0.00 0.00 43.89 4.44
4390 5625 4.722700 CCACCACCAAGGAGGGCG 62.723 72.222 7.50 0.00 43.82 6.13
4405 5640 2.350895 CCCCTTGCACACGATCCA 59.649 61.111 0.00 0.00 0.00 3.41
4435 5671 4.821589 GAGGTGCCGCTTCCCTCG 62.822 72.222 8.07 0.00 35.79 4.63
4438 5674 4.785453 CCAGAGGTGCCGCTTCCC 62.785 72.222 0.00 0.00 0.00 3.97
4460 5696 0.804989 CATCTTTTCCGGCAGTCACC 59.195 55.000 0.00 0.00 0.00 4.02
4467 5703 1.803289 GTCTGCCATCTTTTCCGGC 59.197 57.895 0.00 0.00 46.43 6.13
4477 5713 2.191375 CATGCCTCCGTCTGCCAT 59.809 61.111 0.00 0.00 0.00 4.40
4487 5723 1.065199 TCCCATCTTCACACATGCCTC 60.065 52.381 0.00 0.00 0.00 4.70
4491 5727 1.386533 GGCTCCCATCTTCACACATG 58.613 55.000 0.00 0.00 0.00 3.21
4492 5728 0.107508 CGGCTCCCATCTTCACACAT 60.108 55.000 0.00 0.00 0.00 3.21
4493 5729 1.191489 TCGGCTCCCATCTTCACACA 61.191 55.000 0.00 0.00 0.00 3.72
4494 5730 0.179000 ATCGGCTCCCATCTTCACAC 59.821 55.000 0.00 0.00 0.00 3.82
4495 5731 0.465705 GATCGGCTCCCATCTTCACA 59.534 55.000 0.00 0.00 0.00 3.58
4496 5732 0.598680 CGATCGGCTCCCATCTTCAC 60.599 60.000 7.38 0.00 0.00 3.18
4497 5733 0.755327 TCGATCGGCTCCCATCTTCA 60.755 55.000 16.41 0.00 0.00 3.02
4498 5734 0.605589 ATCGATCGGCTCCCATCTTC 59.394 55.000 16.41 0.00 0.00 2.87
4499 5735 1.821753 CTATCGATCGGCTCCCATCTT 59.178 52.381 16.41 0.00 0.00 2.40
4500 5736 1.272203 ACTATCGATCGGCTCCCATCT 60.272 52.381 16.41 0.00 0.00 2.90
4525 5779 5.508994 CCCCAAAAGGTATCTTCACACAAAC 60.509 44.000 0.00 0.00 31.82 2.93
4530 5784 2.990284 TCCCCCAAAAGGTATCTTCACA 59.010 45.455 0.00 0.00 31.82 3.58
4559 5813 0.179171 ATACGCACGAGAACTGACCG 60.179 55.000 0.00 0.00 0.00 4.79
4564 5818 2.450609 AACCAATACGCACGAGAACT 57.549 45.000 0.00 0.00 0.00 3.01
4569 5823 1.434555 CCTGAAACCAATACGCACGA 58.565 50.000 0.00 0.00 0.00 4.35
4570 5824 0.446222 CCCTGAAACCAATACGCACG 59.554 55.000 0.00 0.00 0.00 5.34
4574 5828 5.219633 CAGAAAAACCCTGAAACCAATACG 58.780 41.667 0.00 0.00 33.65 3.06
4575 5829 4.988540 GCAGAAAAACCCTGAAACCAATAC 59.011 41.667 0.00 0.00 33.65 1.89
4576 5830 4.651503 TGCAGAAAAACCCTGAAACCAATA 59.348 37.500 0.00 0.00 33.65 1.90
4577 5831 3.454082 TGCAGAAAAACCCTGAAACCAAT 59.546 39.130 0.00 0.00 33.65 3.16
4578 5832 2.834549 TGCAGAAAAACCCTGAAACCAA 59.165 40.909 0.00 0.00 33.65 3.67
4580 5834 3.118775 AGTTGCAGAAAAACCCTGAAACC 60.119 43.478 9.64 0.00 46.50 3.27
4589 5844 2.345341 GCACACACAGTTGCAGAAAAAC 59.655 45.455 0.00 0.00 0.00 2.43
4599 5854 1.095228 CACCCTTCGCACACACAGTT 61.095 55.000 0.00 0.00 0.00 3.16
4600 5855 1.523711 CACCCTTCGCACACACAGT 60.524 57.895 0.00 0.00 0.00 3.55
4601 5856 0.603707 ATCACCCTTCGCACACACAG 60.604 55.000 0.00 0.00 0.00 3.66
4624 5879 0.833409 CTCCCCTTTGCTGGGCTTTT 60.833 55.000 4.76 0.00 45.78 2.27
4626 5881 2.442413 CTCCCCTTTGCTGGGCTT 59.558 61.111 4.76 0.00 45.78 4.35
4628 5883 4.684134 TGCTCCCCTTTGCTGGGC 62.684 66.667 4.76 0.00 45.78 5.36
4629 5884 2.362120 CTGCTCCCCTTTGCTGGG 60.362 66.667 3.49 3.49 46.68 4.45
4633 5888 0.034089 ATACACCTGCTCCCCTTTGC 60.034 55.000 0.00 0.00 0.00 3.68
4635 5890 1.668826 TCATACACCTGCTCCCCTTT 58.331 50.000 0.00 0.00 0.00 3.11
4657 5912 0.530870 GAGGGAATCTTCCTTCGCCG 60.531 60.000 8.78 0.00 46.72 6.46
4682 5937 1.905637 ATCTTCCTTCGCCGGTTTTT 58.094 45.000 1.90 0.00 0.00 1.94
4683 5938 1.539827 CAATCTTCCTTCGCCGGTTTT 59.460 47.619 1.90 0.00 0.00 2.43
4684 5939 1.165270 CAATCTTCCTTCGCCGGTTT 58.835 50.000 1.90 0.00 0.00 3.27
4685 5940 0.036306 ACAATCTTCCTTCGCCGGTT 59.964 50.000 1.90 0.00 0.00 4.44
4686 5941 0.391263 GACAATCTTCCTTCGCCGGT 60.391 55.000 1.90 0.00 0.00 5.28
4687 5942 0.391130 TGACAATCTTCCTTCGCCGG 60.391 55.000 0.00 0.00 0.00 6.13
4688 5943 1.002366 CTGACAATCTTCCTTCGCCG 58.998 55.000 0.00 0.00 0.00 6.46
4689 5944 2.275318 CTCTGACAATCTTCCTTCGCC 58.725 52.381 0.00 0.00 0.00 5.54
4690 5945 2.093973 TCCTCTGACAATCTTCCTTCGC 60.094 50.000 0.00 0.00 0.00 4.70
4691 5946 3.876274 TCCTCTGACAATCTTCCTTCG 57.124 47.619 0.00 0.00 0.00 3.79
4692 5947 4.223923 TCCTTCCTCTGACAATCTTCCTTC 59.776 45.833 0.00 0.00 0.00 3.46
4693 5948 4.171234 TCCTTCCTCTGACAATCTTCCTT 58.829 43.478 0.00 0.00 0.00 3.36
4694 5949 3.774216 CTCCTTCCTCTGACAATCTTCCT 59.226 47.826 0.00 0.00 0.00 3.36
4695 5950 3.118445 CCTCCTTCCTCTGACAATCTTCC 60.118 52.174 0.00 0.00 0.00 3.46
4696 5951 3.772025 TCCTCCTTCCTCTGACAATCTTC 59.228 47.826 0.00 0.00 0.00 2.87
4697 5952 3.517500 GTCCTCCTTCCTCTGACAATCTT 59.482 47.826 0.00 0.00 0.00 2.40
4698 5953 3.103742 GTCCTCCTTCCTCTGACAATCT 58.896 50.000 0.00 0.00 0.00 2.40
4699 5954 2.159170 CGTCCTCCTTCCTCTGACAATC 60.159 54.545 0.00 0.00 0.00 2.67
4700 5955 1.827969 CGTCCTCCTTCCTCTGACAAT 59.172 52.381 0.00 0.00 0.00 2.71
4701 5956 1.257743 CGTCCTCCTTCCTCTGACAA 58.742 55.000 0.00 0.00 0.00 3.18
4702 5957 0.112606 ACGTCCTCCTTCCTCTGACA 59.887 55.000 0.00 0.00 0.00 3.58
4703 5958 2.125773 TACGTCCTCCTTCCTCTGAC 57.874 55.000 0.00 0.00 0.00 3.51
4704 5959 2.307980 TCTTACGTCCTCCTTCCTCTGA 59.692 50.000 0.00 0.00 0.00 3.27
4705 5960 2.685897 CTCTTACGTCCTCCTTCCTCTG 59.314 54.545 0.00 0.00 0.00 3.35
4706 5961 2.577105 TCTCTTACGTCCTCCTTCCTCT 59.423 50.000 0.00 0.00 0.00 3.69
4707 5962 2.946990 CTCTCTTACGTCCTCCTTCCTC 59.053 54.545 0.00 0.00 0.00 3.71
4708 5963 2.357361 CCTCTCTTACGTCCTCCTTCCT 60.357 54.545 0.00 0.00 0.00 3.36
4709 5964 2.025898 CCTCTCTTACGTCCTCCTTCC 58.974 57.143 0.00 0.00 0.00 3.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.