Multiple sequence alignment - TraesCS3B01G534000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G534000 chr3B 100.000 2285 0 0 1 2285 773879913 773877629 0.000000e+00 4220.0
1 TraesCS3B01G534000 chr3B 86.790 651 73 8 965 1611 773749559 773750200 0.000000e+00 713.0
2 TraesCS3B01G534000 chr3B 93.651 315 18 2 1972 2285 773789421 773789734 9.560000e-129 470.0
3 TraesCS3B01G534000 chr3B 98.895 181 2 0 2105 2285 773842742 773842922 7.870000e-85 324.0
4 TraesCS3B01G534000 chr3B 88.803 259 29 0 653 911 773749275 773749533 3.660000e-83 318.0
5 TraesCS3B01G534000 chr3B 97.647 170 4 0 1807 1976 773757773 773757942 2.220000e-75 292.0
6 TraesCS3B01G534000 chr3B 91.765 170 14 0 1807 1976 773901875 773901706 1.060000e-58 237.0
7 TraesCS3B01G534000 chr3B 89.474 171 14 4 1807 1976 773743111 773743278 1.780000e-51 213.0
8 TraesCS3B01G534000 chr3B 94.915 118 6 0 1635 1752 773751304 773751421 3.880000e-43 185.0
9 TraesCS3B01G534000 chr3B 83.766 154 18 4 1315 1465 773377173 773377024 3.060000e-29 139.0
10 TraesCS3B01G534000 chr3B 97.872 47 1 0 1755 1801 773751773 773751819 5.230000e-12 82.4
11 TraesCS3B01G534000 chr3A 86.739 739 61 8 561 1275 714600301 714601026 0.000000e+00 787.0
12 TraesCS3B01G534000 chr3A 89.974 379 28 6 1 379 714599056 714599424 4.410000e-132 481.0
13 TraesCS3B01G534000 chr3A 82.390 477 57 17 1346 1805 714601325 714601791 7.650000e-105 390.0
14 TraesCS3B01G534000 chr3A 90.000 170 17 0 1807 1976 714588363 714588532 1.060000e-53 220.0
15 TraesCS3B01G534000 chr3A 82.105 285 24 10 2022 2285 714609333 714609611 3.820000e-53 219.0
16 TraesCS3B01G534000 chr3A 87.647 170 21 0 1807 1976 714602301 714602470 4.980000e-47 198.0
17 TraesCS3B01G534000 chr3A 87.255 102 12 1 399 499 714599412 714599513 5.160000e-22 115.0
18 TraesCS3B01G534000 chr3D 85.811 740 72 7 561 1271 579418522 579419257 0.000000e+00 754.0
19 TraesCS3B01G534000 chr3D 91.650 503 29 9 6 507 579402049 579402539 0.000000e+00 684.0
20 TraesCS3B01G534000 chr3D 87.828 419 31 9 1 416 579567960 579567559 7.390000e-130 473.0
21 TraesCS3B01G534000 chr3D 87.589 419 32 9 1 416 579557035 579556634 3.440000e-128 468.0
22 TraesCS3B01G534000 chr3D 87.351 419 33 9 1 416 579562448 579562047 1.600000e-126 462.0
23 TraesCS3B01G534000 chr3D 87.112 419 34 11 1 416 579578697 579578296 7.440000e-125 457.0
24 TraesCS3B01G534000 chr3D 83.432 507 56 19 1317 1805 579419595 579420091 1.610000e-121 446.0
25 TraesCS3B01G534000 chr3D 80.383 418 47 24 102 507 567660271 567659877 3.720000e-73 285.0
26 TraesCS3B01G534000 chr3D 91.279 172 13 1 1807 1976 579383084 579383255 1.360000e-57 233.0
27 TraesCS3B01G534000 chr3D 89.412 170 17 1 1807 1976 579420550 579420718 1.780000e-51 213.0
28 TraesCS3B01G534000 chr3D 88.961 154 17 0 1807 1960 579367337 579367490 8.330000e-45 191.0
29 TraesCS3B01G534000 chr3D 84.783 184 13 4 2104 2285 579428246 579428416 1.090000e-38 171.0
30 TraesCS3B01G534000 chr3D 86.735 98 13 0 2006 2103 579428124 579428221 2.400000e-20 110.0
31 TraesCS3B01G534000 chr4A 87.083 240 17 10 177 416 695784606 695784381 2.250000e-65 259.0
32 TraesCS3B01G534000 chr2B 86.667 240 18 10 177 416 111207505 111207280 1.050000e-63 254.0
33 TraesCS3B01G534000 chr1D 80.743 296 50 7 975 1268 279241135 279241425 8.210000e-55 224.0
34 TraesCS3B01G534000 chr1D 82.564 195 28 4 873 1061 405625491 405625297 1.400000e-37 167.0
35 TraesCS3B01G534000 chr1D 72.544 397 95 11 814 1204 363106315 363106703 1.430000e-22 117.0
36 TraesCS3B01G534000 chr1D 72.066 426 95 20 814 1229 211732692 211732281 3.100000e-19 106.0
37 TraesCS3B01G534000 chr7A 74.433 485 118 6 810 1289 1421118 1421601 1.070000e-48 204.0
38 TraesCS3B01G534000 chr2D 75.000 340 77 6 929 1264 376688290 376688625 1.410000e-32 150.0
39 TraesCS3B01G534000 chr7D 76.628 261 48 8 803 1054 287909509 287909765 5.120000e-27 132.0
40 TraesCS3B01G534000 chr7D 100.000 40 0 0 717 756 92812540 92812501 8.750000e-10 75.0
41 TraesCS3B01G534000 chr7D 100.000 37 0 0 720 756 92808086 92808050 4.070000e-08 69.4
42 TraesCS3B01G534000 chr7D 97.297 37 1 0 720 756 92804579 92804543 1.900000e-06 63.9
43 TraesCS3B01G534000 chr1B 75.610 164 39 1 814 976 486343853 486344016 1.880000e-11 80.5
44 TraesCS3B01G534000 chr7B 97.500 40 1 0 717 756 45329192 45329153 4.070000e-08 69.4
45 TraesCS3B01G534000 chr5D 97.143 35 1 0 814 848 339109187 339109153 2.450000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G534000 chr3B 773877629 773879913 2284 True 4220.0 4220 100.000000 1 2285 1 chr3B.!!$R2 2284
1 TraesCS3B01G534000 chr3B 773749275 773751819 2544 False 324.6 713 92.095000 653 1801 4 chr3B.!!$F5 1148
2 TraesCS3B01G534000 chr3A 714599056 714602470 3414 False 394.2 787 86.801000 1 1976 5 chr3A.!!$F3 1975
3 TraesCS3B01G534000 chr3D 579418522 579420718 2196 False 471.0 754 86.218333 561 1976 3 chr3D.!!$F4 1415

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
772 1523 0.106268 CCTGCCTGCTCTCCTAGAGA 60.106 60.0 8.11 0.0 45.07 3.1 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2062 5066 0.035056 GCTTCAGGTGGCACTATGGT 60.035 55.0 18.45 0.0 0.0 3.55 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
50 51 7.986085 TCCAGGTCTTCTTTTTATTCTTGAG 57.014 36.000 0.00 0.00 0.00 3.02
77 78 9.809096 TGATTATCTAGTTTTGTTCTAGCTGAG 57.191 33.333 0.00 0.00 36.00 3.35
81 82 6.634805 TCTAGTTTTGTTCTAGCTGAGGATG 58.365 40.000 0.00 0.00 36.00 3.51
82 83 5.489792 AGTTTTGTTCTAGCTGAGGATGA 57.510 39.130 0.00 0.00 0.00 2.92
92 93 2.097825 GCTGAGGATGAAAATGTGGCT 58.902 47.619 0.00 0.00 0.00 4.75
100 101 6.131264 AGGATGAAAATGTGGCTGATTATCA 58.869 36.000 0.00 0.00 0.00 2.15
101 102 6.781014 AGGATGAAAATGTGGCTGATTATCAT 59.219 34.615 0.00 0.00 0.00 2.45
112 113 4.142730 GGCTGATTATCATCTCAATTCGGC 60.143 45.833 0.00 0.00 0.00 5.54
122 123 2.092968 TCTCAATTCGGCCACTTGCTAT 60.093 45.455 2.24 0.00 40.92 2.97
123 124 3.133901 TCTCAATTCGGCCACTTGCTATA 59.866 43.478 2.24 0.00 40.92 1.31
124 125 3.202906 TCAATTCGGCCACTTGCTATAC 58.797 45.455 2.24 0.00 40.92 1.47
164 165 1.255667 TGCTTGGAGGACTACCCGTC 61.256 60.000 0.00 0.00 42.07 4.79
174 175 4.028131 AGGACTACCCGTCACATTGAATA 58.972 43.478 0.00 0.00 44.68 1.75
188 189 8.752254 GTCACATTGAATAGAATGATTGCATTG 58.248 33.333 0.00 0.00 44.47 2.82
225 226 5.181690 TCAGTAAAATGTCTTGGTGCAAC 57.818 39.130 0.00 0.00 0.00 4.17
235 236 3.084039 TCTTGGTGCAACTCATTCCATC 58.916 45.455 2.04 0.00 36.74 3.51
236 237 2.885135 TGGTGCAACTCATTCCATCT 57.115 45.000 2.04 0.00 36.74 2.90
237 238 3.998913 TGGTGCAACTCATTCCATCTA 57.001 42.857 2.04 0.00 36.74 1.98
238 239 3.877559 TGGTGCAACTCATTCCATCTAG 58.122 45.455 2.04 0.00 36.74 2.43
239 240 3.264193 TGGTGCAACTCATTCCATCTAGT 59.736 43.478 2.04 0.00 36.74 2.57
240 241 4.263462 TGGTGCAACTCATTCCATCTAGTT 60.263 41.667 2.04 0.00 36.74 2.24
241 242 4.333926 GGTGCAACTCATTCCATCTAGTTC 59.666 45.833 0.00 0.00 36.74 3.01
243 244 3.557595 GCAACTCATTCCATCTAGTTCGG 59.442 47.826 0.00 0.00 29.93 4.30
244 245 4.759782 CAACTCATTCCATCTAGTTCGGT 58.240 43.478 0.00 0.00 29.93 4.69
245 246 5.178797 CAACTCATTCCATCTAGTTCGGTT 58.821 41.667 0.00 0.00 29.93 4.44
246 247 5.012328 ACTCATTCCATCTAGTTCGGTTC 57.988 43.478 0.00 0.00 0.00 3.62
247 248 4.712337 ACTCATTCCATCTAGTTCGGTTCT 59.288 41.667 0.00 0.00 0.00 3.01
248 249 5.011090 TCATTCCATCTAGTTCGGTTCTG 57.989 43.478 0.00 0.00 0.00 3.02
249 250 4.709886 TCATTCCATCTAGTTCGGTTCTGA 59.290 41.667 0.00 0.00 0.00 3.27
255 256 5.447818 CCATCTAGTTCGGTTCTGAAAATGC 60.448 44.000 0.00 0.00 0.00 3.56
258 259 3.476552 AGTTCGGTTCTGAAAATGCTCA 58.523 40.909 0.00 0.00 0.00 4.26
261 262 3.476552 TCGGTTCTGAAAATGCTCAGTT 58.523 40.909 0.00 0.00 42.93 3.16
314 315 3.475566 TTGTGTCTCACTTTAGCTGCT 57.524 42.857 7.57 7.57 35.11 4.24
315 316 4.600692 TTGTGTCTCACTTTAGCTGCTA 57.399 40.909 5.02 5.02 35.11 3.49
316 317 3.914312 TGTGTCTCACTTTAGCTGCTAC 58.086 45.455 9.27 0.00 35.11 3.58
317 318 3.320826 TGTGTCTCACTTTAGCTGCTACA 59.679 43.478 9.27 1.61 35.11 2.74
355 356 9.134055 TGGAATTAATGCTTCATATGATGTTCA 57.866 29.630 17.26 9.85 0.00 3.18
393 394 9.944376 AGCTGAAGAAAATAATACTTGTACTGA 57.056 29.630 0.00 0.00 0.00 3.41
394 395 9.974750 GCTGAAGAAAATAATACTTGTACTGAC 57.025 33.333 0.00 0.00 0.00 3.51
406 407 5.088141 CTTGTACTGACAACAAGCAGAAG 57.912 43.478 7.00 0.00 45.15 2.85
407 408 4.400529 TGTACTGACAACAAGCAGAAGA 57.599 40.909 0.00 0.00 36.07 2.87
408 409 4.765273 TGTACTGACAACAAGCAGAAGAA 58.235 39.130 0.00 0.00 36.07 2.52
409 410 5.182487 TGTACTGACAACAAGCAGAAGAAA 58.818 37.500 0.00 0.00 36.07 2.52
410 411 4.889832 ACTGACAACAAGCAGAAGAAAG 57.110 40.909 0.00 0.00 36.07 2.62
419 420 5.075493 ACAAGCAGAAGAAAGGATTGTCAT 58.925 37.500 0.00 0.00 36.53 3.06
426 427 3.960571 AGAAAGGATTGTCATGGTCAGG 58.039 45.455 0.00 0.00 0.00 3.86
429 430 1.637553 AGGATTGTCATGGTCAGGCTT 59.362 47.619 0.00 0.00 0.00 4.35
438 439 1.152830 GGTCAGGCTTTGGTCCCAA 59.847 57.895 0.00 0.00 0.00 4.12
439 440 0.469144 GGTCAGGCTTTGGTCCCAAA 60.469 55.000 10.87 10.87 42.77 3.28
445 446 3.565063 CAGGCTTTGGTCCCAAATTTTTG 59.435 43.478 11.70 5.47 43.78 2.44
446 447 3.201930 AGGCTTTGGTCCCAAATTTTTGT 59.798 39.130 11.70 0.00 43.78 2.83
449 450 5.339177 GCTTTGGTCCCAAATTTTTGTTTG 58.661 37.500 11.70 0.00 43.78 2.93
461 463 6.348376 CAAATTTTTGTTTGTGTTGAGGCACT 60.348 34.615 0.00 0.00 36.39 4.40
490 492 3.056322 GCCAGCCATGTTCATTTTTCTCT 60.056 43.478 0.00 0.00 0.00 3.10
495 497 4.672801 GCCATGTTCATTTTTCTCTCCGAC 60.673 45.833 0.00 0.00 0.00 4.79
499 501 4.750098 TGTTCATTTTTCTCTCCGACTGAC 59.250 41.667 0.00 0.00 0.00 3.51
500 502 4.600692 TCATTTTTCTCTCCGACTGACA 57.399 40.909 0.00 0.00 0.00 3.58
502 504 4.991056 TCATTTTTCTCTCCGACTGACAAG 59.009 41.667 0.00 0.00 0.00 3.16
511 1084 3.585862 TCCGACTGACAAGATGTTTAGC 58.414 45.455 0.00 0.00 0.00 3.09
520 1093 5.049198 TGACAAGATGTTTAGCTGCTTCTTG 60.049 40.000 27.12 27.12 44.93 3.02
524 1097 1.531149 TGTTTAGCTGCTTCTTGCGAC 59.469 47.619 7.79 0.00 46.63 5.19
536 1109 0.865769 CTTGCGACGGTTGCTACTTT 59.134 50.000 20.38 0.00 0.00 2.66
542 1115 2.093783 CGACGGTTGCTACTTTCCATTC 59.906 50.000 0.00 0.00 0.00 2.67
555 1128 4.901250 ACTTTCCATTCATTCAAAGGTGGT 59.099 37.500 0.00 0.00 31.29 4.16
557 1130 4.870123 TCCATTCATTCAAAGGTGGTTG 57.130 40.909 0.00 0.00 0.00 3.77
561 1134 5.358922 CATTCATTCAAAGGTGGTTGTTGT 58.641 37.500 0.00 0.00 0.00 3.32
562 1135 4.383850 TCATTCAAAGGTGGTTGTTGTG 57.616 40.909 0.00 0.00 0.00 3.33
563 1136 3.766591 TCATTCAAAGGTGGTTGTTGTGT 59.233 39.130 0.00 0.00 0.00 3.72
564 1137 4.950475 TCATTCAAAGGTGGTTGTTGTGTA 59.050 37.500 0.00 0.00 0.00 2.90
565 1138 5.596361 TCATTCAAAGGTGGTTGTTGTGTAT 59.404 36.000 0.00 0.00 0.00 2.29
567 1140 7.450014 TCATTCAAAGGTGGTTGTTGTGTATAT 59.550 33.333 0.00 0.00 0.00 0.86
568 1141 8.735315 CATTCAAAGGTGGTTGTTGTGTATATA 58.265 33.333 0.00 0.00 0.00 0.86
569 1142 7.675962 TCAAAGGTGGTTGTTGTGTATATAC 57.324 36.000 5.89 5.89 0.00 1.47
651 1402 0.179179 GGCTGAATTTGCAGACGCTC 60.179 55.000 0.00 0.00 38.14 5.03
664 1415 0.651031 GACGCTCGGCTTGTATTTCC 59.349 55.000 0.00 0.00 0.00 3.13
684 1435 5.831702 TCCGTTTTTAAAAGTGTGCCTAA 57.168 34.783 0.14 0.00 0.00 2.69
685 1436 6.205101 TCCGTTTTTAAAAGTGTGCCTAAA 57.795 33.333 0.14 0.00 0.00 1.85
772 1523 0.106268 CCTGCCTGCTCTCCTAGAGA 60.106 60.000 8.11 0.00 45.07 3.10
805 1556 1.985116 GAGTTCTGGAGCCGTCCCT 60.985 63.158 0.00 0.00 43.15 4.20
850 1601 5.656480 TGTTGATGCATCTTTTGATCATGG 58.344 37.500 26.32 0.00 36.97 3.66
859 1610 6.405065 GCATCTTTTGATCATGGTCAGCTTAA 60.405 38.462 9.00 0.00 36.97 1.85
867 1618 0.771127 TGGTCAGCTTAAGGGCACTT 59.229 50.000 6.40 6.40 40.74 3.16
871 1622 2.884639 GTCAGCTTAAGGGCACTTTTGA 59.115 45.455 6.49 3.61 38.14 2.69
878 1636 2.200337 GGGCACTTTTGAGGCGGTT 61.200 57.895 0.00 0.00 36.50 4.44
879 1637 1.739667 GGCACTTTTGAGGCGGTTT 59.260 52.632 0.00 0.00 0.00 3.27
896 1654 3.066760 CGGTTTTCAGGGATGATAAAGGC 59.933 47.826 0.00 0.00 0.00 4.35
907 1665 6.384886 AGGGATGATAAAGGCAAATTCATTGT 59.615 34.615 0.00 0.00 41.32 2.71
911 1669 7.953005 TGATAAAGGCAAATTCATTGTAGGA 57.047 32.000 0.00 0.00 41.32 2.94
930 1695 7.001674 TGTAGGAGGAATGAGAAGATAGACTC 58.998 42.308 0.00 0.00 0.00 3.36
934 1699 5.197451 AGGAATGAGAAGATAGACTCGTGT 58.803 41.667 0.00 0.00 36.11 4.49
1007 1772 0.614812 GCAAAGGGTGGGATGCAATT 59.385 50.000 0.00 0.00 38.63 2.32
1008 1773 1.676615 GCAAAGGGTGGGATGCAATTG 60.677 52.381 0.00 0.00 38.63 2.32
1015 1781 2.415893 GGTGGGATGCAATTGTCTTTCG 60.416 50.000 7.40 0.00 0.00 3.46
1033 1800 9.430623 TGTCTTTCGTTAATTCTGACAATATGA 57.569 29.630 0.00 0.00 31.30 2.15
1047 1814 6.046593 TGACAATATGAAGGTTATCGACACC 58.953 40.000 7.43 7.43 34.06 4.16
1050 1817 7.732025 ACAATATGAAGGTTATCGACACCATA 58.268 34.615 16.21 7.28 36.67 2.74
1056 1823 5.934402 AGGTTATCGACACCATAAAGAGT 57.066 39.130 16.21 0.00 36.67 3.24
1068 1835 4.080299 ACCATAAAGAGTGGAGGATGTTCC 60.080 45.833 0.00 0.00 39.12 3.62
1072 1839 4.713946 GTGGAGGATGTTCCGCAA 57.286 55.556 0.97 0.00 45.16 4.85
1095 1862 2.258286 GCGGCAGCGGTTTTTGAT 59.742 55.556 0.00 0.00 0.00 2.57
1128 1895 6.437928 TCATTTGGCATGCGATTTTACTATC 58.562 36.000 12.44 0.00 0.00 2.08
1142 1909 9.042632 CGATTTTACTATCTCTAGATTCGAACG 57.957 37.037 0.00 0.00 36.05 3.95
1146 1913 6.062434 ACTATCTCTAGATTCGAACGTTGG 57.938 41.667 5.00 4.21 36.05 3.77
1148 1915 4.617808 TCTCTAGATTCGAACGTTGGAG 57.382 45.455 5.00 6.23 0.00 3.86
1163 1930 5.411781 ACGTTGGAGTAGAGAAGCAAATAG 58.588 41.667 0.00 0.00 0.00 1.73
1239 2006 7.687941 GTTTGAGGAACCTCTGAATGAAATA 57.312 36.000 19.61 0.00 43.12 1.40
1300 2068 9.946165 CGATAGAATAAGTTTATTGGGGTTTTC 57.054 33.333 2.03 0.00 33.72 2.29
1358 2417 4.826733 TGGTTCACATTGCAAATAGTGAGT 59.173 37.500 23.04 5.88 41.46 3.41
1360 2419 5.278463 GGTTCACATTGCAAATAGTGAGTGT 60.278 40.000 23.04 11.16 41.46 3.55
1420 2479 5.408604 CGTCATAATATGTGTTAGAAGGGGC 59.591 44.000 0.00 0.00 0.00 5.80
1548 2609 6.768029 TTCTTTTGAATTCAATTGAAGCCG 57.232 33.333 24.17 9.62 37.48 5.52
1598 2659 2.047274 GCTAGTTGCACTCGGCCA 60.047 61.111 2.24 0.00 43.89 5.36
1652 3793 4.827304 TTTTCGCATCATTGTTGTCTCA 57.173 36.364 0.00 0.00 0.00 3.27
1697 3839 2.643551 CCTGAAATTGTCGCCTACCAT 58.356 47.619 0.00 0.00 0.00 3.55
1709 3851 4.332819 GTCGCCTACCATGAATATATTGCC 59.667 45.833 1.78 0.00 0.00 4.52
1801 4292 6.992123 TGAAATAATGACATGCTCCGTAGATT 59.008 34.615 0.00 0.00 0.00 2.40
1802 4293 6.791887 AATAATGACATGCTCCGTAGATTG 57.208 37.500 0.00 0.00 0.00 2.67
1803 4294 1.939974 TGACATGCTCCGTAGATTGC 58.060 50.000 0.00 0.00 0.00 3.56
1804 4295 0.855349 GACATGCTCCGTAGATTGCG 59.145 55.000 0.00 0.00 0.00 4.85
1805 4296 1.154205 ACATGCTCCGTAGATTGCGC 61.154 55.000 0.00 0.00 0.00 6.09
1831 4835 3.018149 GAGTCTCCGTATCCACAGAGTT 58.982 50.000 0.00 0.00 32.04 3.01
1832 4836 3.432378 AGTCTCCGTATCCACAGAGTTT 58.568 45.455 0.00 0.00 32.04 2.66
1835 4839 3.830178 TCTCCGTATCCACAGAGTTTTGA 59.170 43.478 0.00 0.00 32.04 2.69
1841 4845 4.553330 ATCCACAGAGTTTTGACCGTAT 57.447 40.909 0.00 0.00 0.00 3.06
1853 4857 3.784701 TGACCGTATTCTGCTCTCTTC 57.215 47.619 0.00 0.00 0.00 2.87
1865 4869 4.036971 TCTGCTCTCTTCGCTACCTTATTC 59.963 45.833 0.00 0.00 0.00 1.75
1869 4873 4.794334 TCTCTTCGCTACCTTATTCCTCT 58.206 43.478 0.00 0.00 0.00 3.69
1880 4884 9.267084 GCTACCTTATTCCTCTGAGAAAAATAG 57.733 37.037 6.17 2.87 0.00 1.73
1883 4887 9.052365 ACCTTATTCCTCTGAGAAAAATAGAGT 57.948 33.333 6.17 6.10 36.96 3.24
1930 4934 3.006967 GTGCTTCTACTCTCCAAGGTTGA 59.993 47.826 0.00 0.00 0.00 3.18
1933 4937 5.105310 TGCTTCTACTCTCCAAGGTTGATAC 60.105 44.000 0.00 0.00 0.00 2.24
1947 4951 5.620206 AGGTTGATACAACAGTTGACATGA 58.380 37.500 20.56 4.22 0.00 3.07
1950 4954 6.017109 GGTTGATACAACAGTTGACATGAGTT 60.017 38.462 20.56 0.00 0.00 3.01
1970 4974 1.383109 TCTGGCATCCGGGTCATCT 60.383 57.895 0.00 0.00 0.00 2.90
1976 4980 1.407437 GCATCCGGGTCATCTTGAACT 60.407 52.381 0.00 0.00 33.75 3.01
1977 4981 2.941415 GCATCCGGGTCATCTTGAACTT 60.941 50.000 0.00 0.00 33.75 2.66
1978 4982 2.472695 TCCGGGTCATCTTGAACTTG 57.527 50.000 0.00 0.00 33.75 3.16
1979 4983 1.697432 TCCGGGTCATCTTGAACTTGT 59.303 47.619 0.00 0.00 33.75 3.16
1980 4984 2.076863 CCGGGTCATCTTGAACTTGTC 58.923 52.381 0.00 0.00 33.75 3.18
1981 4985 2.549992 CCGGGTCATCTTGAACTTGTCA 60.550 50.000 0.00 0.00 33.75 3.58
1982 4986 2.480419 CGGGTCATCTTGAACTTGTCAC 59.520 50.000 0.00 0.00 33.75 3.67
1983 4987 3.476552 GGGTCATCTTGAACTTGTCACA 58.523 45.455 0.00 0.00 33.75 3.58
1984 4988 4.074970 GGGTCATCTTGAACTTGTCACAT 58.925 43.478 0.00 0.00 33.75 3.21
1985 4989 4.083110 GGGTCATCTTGAACTTGTCACATG 60.083 45.833 0.00 0.00 33.75 3.21
1986 4990 4.756642 GGTCATCTTGAACTTGTCACATGA 59.243 41.667 0.00 0.00 35.39 3.07
1987 4991 5.106791 GGTCATCTTGAACTTGTCACATGAG 60.107 44.000 0.00 0.00 36.85 2.90
1988 4992 5.698089 GTCATCTTGAACTTGTCACATGAGA 59.302 40.000 0.00 0.00 36.85 3.27
1989 4993 6.203530 GTCATCTTGAACTTGTCACATGAGAA 59.796 38.462 0.00 0.00 36.85 2.87
1990 4994 5.991328 TCTTGAACTTGTCACATGAGAAC 57.009 39.130 0.00 0.00 35.39 3.01
1991 4995 5.427378 TCTTGAACTTGTCACATGAGAACA 58.573 37.500 0.00 0.00 35.39 3.18
1992 4996 5.294306 TCTTGAACTTGTCACATGAGAACAC 59.706 40.000 0.00 0.00 35.39 3.32
1993 4997 4.769688 TGAACTTGTCACATGAGAACACT 58.230 39.130 0.00 0.00 0.00 3.55
1994 4998 5.185454 TGAACTTGTCACATGAGAACACTT 58.815 37.500 0.00 0.00 0.00 3.16
1995 4999 5.647658 TGAACTTGTCACATGAGAACACTTT 59.352 36.000 0.00 0.00 0.00 2.66
1996 5000 5.490139 ACTTGTCACATGAGAACACTTTG 57.510 39.130 0.00 0.00 0.00 2.77
1997 5001 4.336433 ACTTGTCACATGAGAACACTTTGG 59.664 41.667 0.00 0.00 0.00 3.28
1998 5002 3.884895 TGTCACATGAGAACACTTTGGT 58.115 40.909 0.00 0.00 0.00 3.67
2000 5004 3.003689 GTCACATGAGAACACTTTGGTGG 59.996 47.826 0.00 0.00 46.85 4.61
2001 5005 1.956477 ACATGAGAACACTTTGGTGGC 59.044 47.619 0.00 0.00 46.85 5.01
2002 5006 1.955778 CATGAGAACACTTTGGTGGCA 59.044 47.619 0.00 0.00 46.85 4.92
2003 5007 2.136298 TGAGAACACTTTGGTGGCAA 57.864 45.000 0.00 0.00 46.85 4.52
2004 5008 2.451490 TGAGAACACTTTGGTGGCAAA 58.549 42.857 0.00 0.00 46.85 3.68
2005 5009 2.165437 TGAGAACACTTTGGTGGCAAAC 59.835 45.455 0.00 0.00 46.85 2.93
2006 5010 2.427095 GAGAACACTTTGGTGGCAAACT 59.573 45.455 0.00 0.00 46.85 2.66
2007 5011 3.626930 AGAACACTTTGGTGGCAAACTA 58.373 40.909 0.00 0.00 46.85 2.24
2008 5012 4.020543 AGAACACTTTGGTGGCAAACTAA 58.979 39.130 0.00 0.00 46.85 2.24
2009 5013 4.464597 AGAACACTTTGGTGGCAAACTAAA 59.535 37.500 0.00 1.38 46.85 1.85
2010 5014 4.118093 ACACTTTGGTGGCAAACTAAAC 57.882 40.909 0.00 0.00 46.85 2.01
2011 5015 3.767131 ACACTTTGGTGGCAAACTAAACT 59.233 39.130 0.00 0.00 46.85 2.66
2012 5016 4.221924 ACACTTTGGTGGCAAACTAAACTT 59.778 37.500 0.00 0.00 46.85 2.66
2013 5017 4.566360 CACTTTGGTGGCAAACTAAACTTG 59.434 41.667 0.00 0.00 39.59 3.16
2014 5018 3.810310 TTGGTGGCAAACTAAACTTGG 57.190 42.857 0.00 0.00 0.00 3.61
2015 5019 1.410882 TGGTGGCAAACTAAACTTGGC 59.589 47.619 0.00 2.46 46.53 4.52
2018 5022 2.880963 GGCAAACTAAACTTGGCACA 57.119 45.000 4.44 0.00 45.86 4.57
2019 5023 2.469826 GGCAAACTAAACTTGGCACAC 58.530 47.619 4.44 0.00 45.86 3.82
2020 5024 2.159170 GGCAAACTAAACTTGGCACACA 60.159 45.455 4.44 0.00 45.86 3.72
2021 5025 3.115554 GCAAACTAAACTTGGCACACAG 58.884 45.455 0.00 0.00 39.29 3.66
2022 5026 3.705604 CAAACTAAACTTGGCACACAGG 58.294 45.455 0.00 0.00 39.29 4.00
2023 5027 2.729028 ACTAAACTTGGCACACAGGT 57.271 45.000 0.00 0.00 41.75 4.00
2026 5030 2.404083 AACTTGGCACACAGGTTCG 58.596 52.632 0.00 0.00 45.08 3.95
2027 5031 1.724582 AACTTGGCACACAGGTTCGC 61.725 55.000 0.00 0.00 45.08 4.70
2028 5032 2.904866 TTGGCACACAGGTTCGCC 60.905 61.111 0.00 0.00 45.11 5.54
2029 5033 4.947147 TGGCACACAGGTTCGCCC 62.947 66.667 6.44 0.00 44.22 6.13
2030 5034 4.947147 GGCACACAGGTTCGCCCA 62.947 66.667 0.00 0.00 38.67 5.36
2031 5035 2.904866 GCACACAGGTTCGCCCAA 60.905 61.111 0.00 0.00 38.27 4.12
2032 5036 2.908073 GCACACAGGTTCGCCCAAG 61.908 63.158 0.00 0.00 38.27 3.61
2033 5037 1.525995 CACACAGGTTCGCCCAAGT 60.526 57.895 0.00 0.00 38.27 3.16
2034 5038 1.227853 ACACAGGTTCGCCCAAGTC 60.228 57.895 0.00 0.00 38.27 3.01
2035 5039 1.966451 CACAGGTTCGCCCAAGTCC 60.966 63.158 0.00 0.00 38.27 3.85
2036 5040 2.429930 CAGGTTCGCCCAAGTCCA 59.570 61.111 0.00 0.00 38.27 4.02
2037 5041 1.228124 CAGGTTCGCCCAAGTCCAA 60.228 57.895 0.00 0.00 38.27 3.53
2038 5042 0.821711 CAGGTTCGCCCAAGTCCAAA 60.822 55.000 0.00 0.00 38.27 3.28
2039 5043 0.112412 AGGTTCGCCCAAGTCCAAAT 59.888 50.000 0.00 0.00 38.27 2.32
2040 5044 0.966179 GGTTCGCCCAAGTCCAAATT 59.034 50.000 0.00 0.00 0.00 1.82
2041 5045 1.067846 GGTTCGCCCAAGTCCAAATTC 60.068 52.381 0.00 0.00 0.00 2.17
2042 5046 1.067846 GTTCGCCCAAGTCCAAATTCC 60.068 52.381 0.00 0.00 0.00 3.01
2043 5047 0.404040 TCGCCCAAGTCCAAATTCCT 59.596 50.000 0.00 0.00 0.00 3.36
2044 5048 1.203001 TCGCCCAAGTCCAAATTCCTT 60.203 47.619 0.00 0.00 0.00 3.36
2045 5049 1.067635 CGCCCAAGTCCAAATTCCTTG 60.068 52.381 0.00 0.00 36.26 3.61
2046 5050 1.338105 GCCCAAGTCCAAATTCCTTGC 60.338 52.381 0.00 0.00 35.39 4.01
2047 5051 1.969923 CCCAAGTCCAAATTCCTTGCA 59.030 47.619 0.00 0.00 35.39 4.08
2048 5052 2.289010 CCCAAGTCCAAATTCCTTGCAC 60.289 50.000 0.00 0.00 35.39 4.57
2049 5053 2.289010 CCAAGTCCAAATTCCTTGCACC 60.289 50.000 0.00 0.00 35.39 5.01
2050 5054 2.364970 CAAGTCCAAATTCCTTGCACCA 59.635 45.455 0.00 0.00 33.27 4.17
2051 5055 2.242043 AGTCCAAATTCCTTGCACCAG 58.758 47.619 0.00 0.00 33.27 4.00
2052 5056 2.158475 AGTCCAAATTCCTTGCACCAGA 60.158 45.455 0.00 0.00 33.27 3.86
2053 5057 2.627699 GTCCAAATTCCTTGCACCAGAA 59.372 45.455 0.00 0.00 33.27 3.02
2054 5058 2.627699 TCCAAATTCCTTGCACCAGAAC 59.372 45.455 0.00 0.00 33.27 3.01
2055 5059 2.607771 CCAAATTCCTTGCACCAGAACG 60.608 50.000 0.00 0.00 33.27 3.95
2056 5060 1.981256 AATTCCTTGCACCAGAACGT 58.019 45.000 0.00 0.00 0.00 3.99
2057 5061 1.238439 ATTCCTTGCACCAGAACGTG 58.762 50.000 0.00 0.00 36.80 4.49
2058 5062 0.179234 TTCCTTGCACCAGAACGTGA 59.821 50.000 0.00 0.00 35.68 4.35
2059 5063 0.396435 TCCTTGCACCAGAACGTGAT 59.604 50.000 0.00 0.00 35.68 3.06
2060 5064 1.202758 TCCTTGCACCAGAACGTGATT 60.203 47.619 0.00 0.00 35.68 2.57
2061 5065 1.608590 CCTTGCACCAGAACGTGATTT 59.391 47.619 0.00 0.00 35.68 2.17
2062 5066 2.811431 CCTTGCACCAGAACGTGATTTA 59.189 45.455 0.00 0.00 35.68 1.40
2063 5067 3.364964 CCTTGCACCAGAACGTGATTTAC 60.365 47.826 0.00 0.00 35.68 2.01
2064 5068 2.147958 TGCACCAGAACGTGATTTACC 58.852 47.619 0.00 0.00 35.68 2.85
2065 5069 2.147958 GCACCAGAACGTGATTTACCA 58.852 47.619 0.00 0.00 35.68 3.25
2066 5070 2.747446 GCACCAGAACGTGATTTACCAT 59.253 45.455 0.00 0.00 35.68 3.55
2067 5071 3.936453 GCACCAGAACGTGATTTACCATA 59.064 43.478 0.00 0.00 35.68 2.74
2068 5072 4.034048 GCACCAGAACGTGATTTACCATAG 59.966 45.833 0.00 0.00 35.68 2.23
2069 5073 5.175859 CACCAGAACGTGATTTACCATAGT 58.824 41.667 0.00 0.00 35.68 2.12
2070 5074 5.063438 CACCAGAACGTGATTTACCATAGTG 59.937 44.000 0.00 0.00 35.68 2.74
2071 5075 4.034048 CCAGAACGTGATTTACCATAGTGC 59.966 45.833 0.00 0.00 0.00 4.40
2072 5076 4.034048 CAGAACGTGATTTACCATAGTGCC 59.966 45.833 0.00 0.00 0.00 5.01
2073 5077 3.620427 ACGTGATTTACCATAGTGCCA 57.380 42.857 0.00 0.00 0.00 4.92
2074 5078 3.267483 ACGTGATTTACCATAGTGCCAC 58.733 45.455 0.00 0.00 0.00 5.01
2075 5079 2.612212 CGTGATTTACCATAGTGCCACC 59.388 50.000 0.00 0.00 0.00 4.61
2076 5080 3.681594 CGTGATTTACCATAGTGCCACCT 60.682 47.826 0.00 0.00 0.00 4.00
2077 5081 3.627577 GTGATTTACCATAGTGCCACCTG 59.372 47.826 0.00 0.00 0.00 4.00
2078 5082 3.521531 TGATTTACCATAGTGCCACCTGA 59.478 43.478 0.00 0.00 0.00 3.86
2079 5083 4.018870 TGATTTACCATAGTGCCACCTGAA 60.019 41.667 0.00 0.00 0.00 3.02
2080 5084 3.627395 TTACCATAGTGCCACCTGAAG 57.373 47.619 0.00 0.00 0.00 3.02
2081 5085 0.035056 ACCATAGTGCCACCTGAAGC 60.035 55.000 0.00 0.00 0.00 3.86
2082 5086 0.749454 CCATAGTGCCACCTGAAGCC 60.749 60.000 0.00 0.00 0.00 4.35
2083 5087 1.091771 CATAGTGCCACCTGAAGCCG 61.092 60.000 0.00 0.00 0.00 5.52
2084 5088 2.876368 ATAGTGCCACCTGAAGCCGC 62.876 60.000 0.00 0.00 0.00 6.53
2088 5092 2.594303 CCACCTGAAGCCGCACAA 60.594 61.111 0.00 0.00 0.00 3.33
2089 5093 2.620112 CCACCTGAAGCCGCACAAG 61.620 63.158 0.00 0.00 0.00 3.16
2090 5094 2.281761 ACCTGAAGCCGCACAAGG 60.282 61.111 0.00 0.00 0.00 3.61
2091 5095 3.058160 CCTGAAGCCGCACAAGGG 61.058 66.667 0.00 0.00 0.00 3.95
2098 5102 4.813346 CCGCACAAGGGGTAAAGT 57.187 55.556 0.00 0.00 42.60 2.66
2099 5103 2.253513 CCGCACAAGGGGTAAAGTG 58.746 57.895 0.00 0.00 42.60 3.16
2100 5104 1.241315 CCGCACAAGGGGTAAAGTGG 61.241 60.000 0.00 0.00 42.60 4.00
2101 5105 1.241315 CGCACAAGGGGTAAAGTGGG 61.241 60.000 0.00 0.00 38.32 4.61
2102 5106 0.111639 GCACAAGGGGTAAAGTGGGA 59.888 55.000 0.00 0.00 32.80 4.37
2103 5107 1.905637 CACAAGGGGTAAAGTGGGAC 58.094 55.000 0.00 0.00 0.00 4.46
2104 5108 1.144093 CACAAGGGGTAAAGTGGGACA 59.856 52.381 0.00 0.00 0.00 4.02
2105 5109 2.070573 ACAAGGGGTAAAGTGGGACAT 58.929 47.619 0.00 0.00 44.52 3.06
2106 5110 3.009695 CACAAGGGGTAAAGTGGGACATA 59.990 47.826 0.00 0.00 44.52 2.29
2107 5111 3.658705 ACAAGGGGTAAAGTGGGACATAA 59.341 43.478 0.00 0.00 44.52 1.90
2108 5112 4.293901 ACAAGGGGTAAAGTGGGACATAAT 59.706 41.667 0.00 0.00 44.52 1.28
2109 5113 5.222463 ACAAGGGGTAAAGTGGGACATAATT 60.222 40.000 0.00 0.00 44.52 1.40
2110 5114 5.546035 AGGGGTAAAGTGGGACATAATTT 57.454 39.130 0.00 0.00 44.52 1.82
2111 5115 5.910931 AGGGGTAAAGTGGGACATAATTTT 58.089 37.500 0.00 0.00 44.52 1.82
2112 5116 5.719563 AGGGGTAAAGTGGGACATAATTTTG 59.280 40.000 0.00 0.00 44.52 2.44
2113 5117 5.105106 GGGGTAAAGTGGGACATAATTTTGG 60.105 44.000 0.89 0.00 44.52 3.28
2114 5118 5.482526 GGGTAAAGTGGGACATAATTTTGGT 59.517 40.000 0.89 0.00 44.52 3.67
2115 5119 6.014070 GGGTAAAGTGGGACATAATTTTGGTT 60.014 38.462 0.89 0.00 44.52 3.67
2116 5120 7.446769 GGTAAAGTGGGACATAATTTTGGTTT 58.553 34.615 0.89 0.00 44.52 3.27
2117 5121 7.934665 GGTAAAGTGGGACATAATTTTGGTTTT 59.065 33.333 0.89 0.00 44.52 2.43
2118 5122 9.332502 GTAAAGTGGGACATAATTTTGGTTTTT 57.667 29.630 0.89 0.00 44.52 1.94
2147 5151 8.729805 TTTTTGAAACAGACAGCCATAATTTT 57.270 26.923 0.00 0.00 0.00 1.82
2148 5152 7.712264 TTTGAAACAGACAGCCATAATTTTG 57.288 32.000 0.00 0.00 0.00 2.44
2149 5153 6.403866 TGAAACAGACAGCCATAATTTTGT 57.596 33.333 0.00 0.00 0.00 2.83
2150 5154 7.517614 TGAAACAGACAGCCATAATTTTGTA 57.482 32.000 0.00 0.00 0.00 2.41
2151 5155 7.592938 TGAAACAGACAGCCATAATTTTGTAG 58.407 34.615 0.00 0.00 0.00 2.74
2152 5156 7.446931 TGAAACAGACAGCCATAATTTTGTAGA 59.553 33.333 0.00 0.00 0.00 2.59
2153 5157 7.759489 AACAGACAGCCATAATTTTGTAGAA 57.241 32.000 0.00 0.00 0.00 2.10
2154 5158 7.759489 ACAGACAGCCATAATTTTGTAGAAA 57.241 32.000 0.00 0.00 0.00 2.52
2155 5159 7.593825 ACAGACAGCCATAATTTTGTAGAAAC 58.406 34.615 0.00 0.00 0.00 2.78
2156 5160 6.742718 CAGACAGCCATAATTTTGTAGAAACG 59.257 38.462 0.00 0.00 0.00 3.60
2157 5161 6.653320 AGACAGCCATAATTTTGTAGAAACGA 59.347 34.615 0.00 0.00 0.00 3.85
2158 5162 6.608610 ACAGCCATAATTTTGTAGAAACGAC 58.391 36.000 0.00 0.00 0.00 4.34
2159 5163 6.027749 CAGCCATAATTTTGTAGAAACGACC 58.972 40.000 0.00 0.00 0.00 4.79
2160 5164 5.944007 AGCCATAATTTTGTAGAAACGACCT 59.056 36.000 0.00 0.00 0.00 3.85
2161 5165 6.093633 AGCCATAATTTTGTAGAAACGACCTC 59.906 38.462 0.00 0.00 0.00 3.85
2162 5166 6.677187 GCCATAATTTTGTAGAAACGACCTCC 60.677 42.308 0.00 0.00 0.00 4.30
2163 5167 6.373216 CCATAATTTTGTAGAAACGACCTCCA 59.627 38.462 0.00 0.00 0.00 3.86
2164 5168 7.094549 CCATAATTTTGTAGAAACGACCTCCAA 60.095 37.037 0.00 0.00 0.00 3.53
2165 5169 6.702716 AATTTTGTAGAAACGACCTCCAAA 57.297 33.333 0.00 0.00 0.00 3.28
2166 5170 6.894339 ATTTTGTAGAAACGACCTCCAAAT 57.106 33.333 0.00 0.00 0.00 2.32
2167 5171 5.934935 TTTGTAGAAACGACCTCCAAATC 57.065 39.130 0.00 0.00 0.00 2.17
2168 5172 4.884668 TGTAGAAACGACCTCCAAATCT 57.115 40.909 0.00 0.00 0.00 2.40
2169 5173 4.817517 TGTAGAAACGACCTCCAAATCTC 58.182 43.478 0.00 0.00 0.00 2.75
2170 5174 4.527038 TGTAGAAACGACCTCCAAATCTCT 59.473 41.667 0.00 0.00 0.00 3.10
2171 5175 4.625607 AGAAACGACCTCCAAATCTCTT 57.374 40.909 0.00 0.00 0.00 2.85
2172 5176 4.974399 AGAAACGACCTCCAAATCTCTTT 58.026 39.130 0.00 0.00 0.00 2.52
2173 5177 4.757149 AGAAACGACCTCCAAATCTCTTTG 59.243 41.667 0.00 0.00 41.22 2.77
2174 5178 3.771577 ACGACCTCCAAATCTCTTTGT 57.228 42.857 0.00 0.00 40.15 2.83
2175 5179 3.665190 ACGACCTCCAAATCTCTTTGTC 58.335 45.455 0.00 0.00 40.15 3.18
2176 5180 3.325135 ACGACCTCCAAATCTCTTTGTCT 59.675 43.478 0.00 0.00 40.15 3.41
2177 5181 4.202367 ACGACCTCCAAATCTCTTTGTCTT 60.202 41.667 0.00 0.00 40.15 3.01
2178 5182 4.757149 CGACCTCCAAATCTCTTTGTCTTT 59.243 41.667 0.00 0.00 40.15 2.52
2179 5183 5.334414 CGACCTCCAAATCTCTTTGTCTTTG 60.334 44.000 0.00 0.00 40.15 2.77
2180 5184 5.449553 ACCTCCAAATCTCTTTGTCTTTGT 58.550 37.500 0.00 0.00 40.15 2.83
2181 5185 5.893824 ACCTCCAAATCTCTTTGTCTTTGTT 59.106 36.000 0.00 0.00 40.15 2.83
2182 5186 6.381133 ACCTCCAAATCTCTTTGTCTTTGTTT 59.619 34.615 0.00 0.00 40.15 2.83
2183 5187 6.920210 CCTCCAAATCTCTTTGTCTTTGTTTC 59.080 38.462 0.00 0.00 40.15 2.78
2184 5188 6.805713 TCCAAATCTCTTTGTCTTTGTTTCC 58.194 36.000 0.00 0.00 40.15 3.13
2185 5189 5.985530 CCAAATCTCTTTGTCTTTGTTTCCC 59.014 40.000 0.00 0.00 40.15 3.97
2186 5190 6.183360 CCAAATCTCTTTGTCTTTGTTTCCCT 60.183 38.462 0.00 0.00 40.15 4.20
2187 5191 6.641169 AATCTCTTTGTCTTTGTTTCCCTC 57.359 37.500 0.00 0.00 0.00 4.30
2188 5192 5.110814 TCTCTTTGTCTTTGTTTCCCTCA 57.889 39.130 0.00 0.00 0.00 3.86
2189 5193 5.694995 TCTCTTTGTCTTTGTTTCCCTCAT 58.305 37.500 0.00 0.00 0.00 2.90
2190 5194 6.837312 TCTCTTTGTCTTTGTTTCCCTCATA 58.163 36.000 0.00 0.00 0.00 2.15
2191 5195 7.287061 TCTCTTTGTCTTTGTTTCCCTCATAA 58.713 34.615 0.00 0.00 0.00 1.90
2192 5196 7.445402 TCTCTTTGTCTTTGTTTCCCTCATAAG 59.555 37.037 0.00 0.00 0.00 1.73
2193 5197 7.287061 TCTTTGTCTTTGTTTCCCTCATAAGA 58.713 34.615 0.00 0.00 0.00 2.10
2194 5198 7.777910 TCTTTGTCTTTGTTTCCCTCATAAGAA 59.222 33.333 0.00 0.00 0.00 2.52
2195 5199 7.510549 TTGTCTTTGTTTCCCTCATAAGAAG 57.489 36.000 0.00 0.00 0.00 2.85
2196 5200 5.473504 TGTCTTTGTTTCCCTCATAAGAAGC 59.526 40.000 0.00 0.00 0.00 3.86
2197 5201 5.010282 TCTTTGTTTCCCTCATAAGAAGCC 58.990 41.667 0.00 0.00 0.00 4.35
2198 5202 4.657814 TTGTTTCCCTCATAAGAAGCCT 57.342 40.909 0.00 0.00 0.00 4.58
2199 5203 4.222124 TGTTTCCCTCATAAGAAGCCTC 57.778 45.455 0.00 0.00 0.00 4.70
2200 5204 3.846588 TGTTTCCCTCATAAGAAGCCTCT 59.153 43.478 0.00 0.00 0.00 3.69
2201 5205 4.080863 TGTTTCCCTCATAAGAAGCCTCTC 60.081 45.833 0.00 0.00 0.00 3.20
2202 5206 2.311463 TCCCTCATAAGAAGCCTCTCG 58.689 52.381 0.00 0.00 0.00 4.04
2203 5207 1.270041 CCCTCATAAGAAGCCTCTCGC 60.270 57.143 0.00 0.00 37.98 5.03
2212 5216 2.841988 GCCTCTCGCTCTCCCCAT 60.842 66.667 0.00 0.00 0.00 4.00
2213 5217 2.866726 GCCTCTCGCTCTCCCCATC 61.867 68.421 0.00 0.00 0.00 3.51
2214 5218 1.152567 CCTCTCGCTCTCCCCATCT 60.153 63.158 0.00 0.00 0.00 2.90
2215 5219 1.178534 CCTCTCGCTCTCCCCATCTC 61.179 65.000 0.00 0.00 0.00 2.75
2216 5220 0.178992 CTCTCGCTCTCCCCATCTCT 60.179 60.000 0.00 0.00 0.00 3.10
2217 5221 0.260230 TCTCGCTCTCCCCATCTCTT 59.740 55.000 0.00 0.00 0.00 2.85
2218 5222 0.673437 CTCGCTCTCCCCATCTCTTC 59.327 60.000 0.00 0.00 0.00 2.87
2219 5223 0.260230 TCGCTCTCCCCATCTCTTCT 59.740 55.000 0.00 0.00 0.00 2.85
2220 5224 0.673437 CGCTCTCCCCATCTCTTCTC 59.327 60.000 0.00 0.00 0.00 2.87
2221 5225 1.753847 CGCTCTCCCCATCTCTTCTCT 60.754 57.143 0.00 0.00 0.00 3.10
2222 5226 2.397597 GCTCTCCCCATCTCTTCTCTT 58.602 52.381 0.00 0.00 0.00 2.85
2223 5227 2.771372 GCTCTCCCCATCTCTTCTCTTT 59.229 50.000 0.00 0.00 0.00 2.52
2224 5228 3.432046 GCTCTCCCCATCTCTTCTCTTTG 60.432 52.174 0.00 0.00 0.00 2.77
2225 5229 3.774216 CTCTCCCCATCTCTTCTCTTTGT 59.226 47.826 0.00 0.00 0.00 2.83
2226 5230 3.517100 TCTCCCCATCTCTTCTCTTTGTG 59.483 47.826 0.00 0.00 0.00 3.33
2227 5231 2.573462 TCCCCATCTCTTCTCTTTGTGG 59.427 50.000 0.00 0.00 0.00 4.17
2228 5232 2.363683 CCCATCTCTTCTCTTTGTGGC 58.636 52.381 0.00 0.00 0.00 5.01
2229 5233 2.026449 CCCATCTCTTCTCTTTGTGGCT 60.026 50.000 0.00 0.00 0.00 4.75
2230 5234 3.008330 CCATCTCTTCTCTTTGTGGCTG 58.992 50.000 0.00 0.00 0.00 4.85
2231 5235 2.847327 TCTCTTCTCTTTGTGGCTGG 57.153 50.000 0.00 0.00 0.00 4.85
2232 5236 1.163554 CTCTTCTCTTTGTGGCTGGC 58.836 55.000 0.00 0.00 0.00 4.85
2233 5237 0.250901 TCTTCTCTTTGTGGCTGGCC 60.251 55.000 4.43 4.43 0.00 5.36
2234 5238 0.251077 CTTCTCTTTGTGGCTGGCCT 60.251 55.000 13.05 0.00 36.94 5.19
2235 5239 1.003580 CTTCTCTTTGTGGCTGGCCTA 59.996 52.381 13.05 0.00 36.94 3.93
2236 5240 0.324943 TCTCTTTGTGGCTGGCCTAC 59.675 55.000 13.05 9.59 36.94 3.18
2237 5241 0.678048 CTCTTTGTGGCTGGCCTACC 60.678 60.000 13.05 5.90 36.94 3.18
2238 5242 1.133809 TCTTTGTGGCTGGCCTACCT 61.134 55.000 13.05 0.00 36.63 3.08
2239 5243 0.618458 CTTTGTGGCTGGCCTACCTA 59.382 55.000 13.05 2.86 36.63 3.08
2240 5244 0.618458 TTTGTGGCTGGCCTACCTAG 59.382 55.000 13.05 0.00 36.63 3.02
2241 5245 0.546747 TTGTGGCTGGCCTACCTAGT 60.547 55.000 13.05 0.00 36.63 2.57
2242 5246 1.264749 TGTGGCTGGCCTACCTAGTG 61.265 60.000 13.05 0.00 36.63 2.74
2243 5247 0.976073 GTGGCTGGCCTACCTAGTGA 60.976 60.000 13.05 0.00 36.63 3.41
2244 5248 0.976073 TGGCTGGCCTACCTAGTGAC 60.976 60.000 13.05 0.00 36.63 3.67
2245 5249 0.688087 GGCTGGCCTACCTAGTGACT 60.688 60.000 3.32 0.00 36.63 3.41
2246 5250 1.196012 GCTGGCCTACCTAGTGACTT 58.804 55.000 3.32 0.00 36.63 3.01
2247 5251 1.555533 GCTGGCCTACCTAGTGACTTT 59.444 52.381 3.32 0.00 36.63 2.66
2248 5252 2.027100 GCTGGCCTACCTAGTGACTTTT 60.027 50.000 3.32 0.00 36.63 2.27
2249 5253 3.559384 GCTGGCCTACCTAGTGACTTTTT 60.559 47.826 3.32 0.00 36.63 1.94
2250 5254 4.254492 CTGGCCTACCTAGTGACTTTTTC 58.746 47.826 3.32 0.00 36.63 2.29
2251 5255 3.649023 TGGCCTACCTAGTGACTTTTTCA 59.351 43.478 3.32 0.00 36.63 2.69
2252 5256 4.288626 TGGCCTACCTAGTGACTTTTTCAT 59.711 41.667 3.32 0.00 34.72 2.57
2253 5257 5.222048 TGGCCTACCTAGTGACTTTTTCATT 60.222 40.000 3.32 0.00 34.72 2.57
2254 5258 5.710567 GGCCTACCTAGTGACTTTTTCATTT 59.289 40.000 0.00 0.00 36.32 2.32
2255 5259 6.882678 GGCCTACCTAGTGACTTTTTCATTTA 59.117 38.462 0.00 0.00 36.32 1.40
2256 5260 7.392393 GGCCTACCTAGTGACTTTTTCATTTAA 59.608 37.037 0.00 0.00 36.32 1.52
2257 5261 8.451748 GCCTACCTAGTGACTTTTTCATTTAAG 58.548 37.037 0.00 0.00 36.32 1.85
2258 5262 9.720769 CCTACCTAGTGACTTTTTCATTTAAGA 57.279 33.333 0.00 0.00 36.32 2.10
2262 5266 9.846248 CCTAGTGACTTTTTCATTTAAGATTGG 57.154 33.333 0.00 0.00 36.32 3.16
2263 5267 9.346725 CTAGTGACTTTTTCATTTAAGATTGGC 57.653 33.333 0.00 0.00 36.32 4.52
2264 5268 7.154656 AGTGACTTTTTCATTTAAGATTGGCC 58.845 34.615 0.00 0.00 36.32 5.36
2265 5269 7.015584 AGTGACTTTTTCATTTAAGATTGGCCT 59.984 33.333 3.32 0.00 36.32 5.19
2266 5270 8.303876 GTGACTTTTTCATTTAAGATTGGCCTA 58.696 33.333 3.32 0.00 36.32 3.93
2267 5271 8.303876 TGACTTTTTCATTTAAGATTGGCCTAC 58.696 33.333 3.32 0.00 0.00 3.18
2268 5272 8.189119 ACTTTTTCATTTAAGATTGGCCTACA 57.811 30.769 3.32 0.00 0.00 2.74
2269 5273 8.088365 ACTTTTTCATTTAAGATTGGCCTACAC 58.912 33.333 3.32 0.00 0.00 2.90
2270 5274 6.524101 TTTCATTTAAGATTGGCCTACACC 57.476 37.500 3.32 0.00 0.00 4.16
2271 5275 5.450818 TCATTTAAGATTGGCCTACACCT 57.549 39.130 3.32 0.00 0.00 4.00
2272 5276 6.569127 TCATTTAAGATTGGCCTACACCTA 57.431 37.500 3.32 0.00 0.00 3.08
2273 5277 6.591935 TCATTTAAGATTGGCCTACACCTAG 58.408 40.000 3.32 0.00 0.00 3.02
2274 5278 4.417426 TTAAGATTGGCCTACACCTAGC 57.583 45.455 3.32 0.00 0.00 3.42
2275 5279 0.753262 AGATTGGCCTACACCTAGCG 59.247 55.000 3.32 0.00 0.00 4.26
2276 5280 0.750850 GATTGGCCTACACCTAGCGA 59.249 55.000 3.32 0.00 0.00 4.93
2277 5281 0.464452 ATTGGCCTACACCTAGCGAC 59.536 55.000 3.32 0.00 0.00 5.19
2278 5282 0.613853 TTGGCCTACACCTAGCGACT 60.614 55.000 3.32 0.00 0.00 4.18
2279 5283 0.613853 TGGCCTACACCTAGCGACTT 60.614 55.000 3.32 0.00 0.00 3.01
2280 5284 0.179108 GGCCTACACCTAGCGACTTG 60.179 60.000 0.00 0.00 0.00 3.16
2281 5285 0.815734 GCCTACACCTAGCGACTTGA 59.184 55.000 0.00 0.00 0.00 3.02
2282 5286 1.409427 GCCTACACCTAGCGACTTGAT 59.591 52.381 0.00 0.00 0.00 2.57
2283 5287 2.799917 GCCTACACCTAGCGACTTGATG 60.800 54.545 0.00 0.00 0.00 3.07
2284 5288 2.427453 CCTACACCTAGCGACTTGATGT 59.573 50.000 0.00 0.00 0.00 3.06
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 3.947834 CCTGGATAAAAGGCAAAGTCGAT 59.052 43.478 0.00 0.00 0.00 3.59
11 12 3.081804 ACCTGGATAAAAGGCAAAGTCG 58.918 45.455 0.00 0.00 38.48 4.18
50 51 9.587772 TCAGCTAGAACAAAACTAGATAATCAC 57.412 33.333 0.00 0.00 39.48 3.06
60 61 5.489792 TCATCCTCAGCTAGAACAAAACT 57.510 39.130 0.00 0.00 0.00 2.66
71 72 2.097825 GCCACATTTTCATCCTCAGCT 58.902 47.619 0.00 0.00 0.00 4.24
77 78 6.395426 TGATAATCAGCCACATTTTCATCC 57.605 37.500 0.00 0.00 0.00 3.51
81 82 7.268199 TGAGATGATAATCAGCCACATTTTC 57.732 36.000 0.00 0.00 32.25 2.29
82 83 7.649533 TTGAGATGATAATCAGCCACATTTT 57.350 32.000 0.00 0.00 32.25 1.82
92 93 4.756642 GTGGCCGAATTGAGATGATAATCA 59.243 41.667 0.00 0.00 0.00 2.57
100 101 1.098050 GCAAGTGGCCGAATTGAGAT 58.902 50.000 16.18 0.00 36.11 2.75
101 102 0.036732 AGCAAGTGGCCGAATTGAGA 59.963 50.000 16.18 0.00 46.50 3.27
112 113 4.832248 TCAGGTGAAAGTATAGCAAGTGG 58.168 43.478 0.00 0.00 0.00 4.00
122 123 6.426937 GCACTTCTTACAATCAGGTGAAAGTA 59.573 38.462 0.00 0.00 0.00 2.24
123 124 5.239525 GCACTTCTTACAATCAGGTGAAAGT 59.760 40.000 0.00 0.00 0.00 2.66
124 125 5.471456 AGCACTTCTTACAATCAGGTGAAAG 59.529 40.000 0.00 0.00 0.00 2.62
164 165 8.642908 ACAATGCAATCATTCTATTCAATGTG 57.357 30.769 0.00 0.00 40.74 3.21
174 175 5.503927 AGTGGACTACAATGCAATCATTCT 58.496 37.500 0.00 0.00 40.74 2.40
203 204 4.887071 AGTTGCACCAAGACATTTTACTGA 59.113 37.500 0.00 0.00 0.00 3.41
215 216 3.087031 AGATGGAATGAGTTGCACCAAG 58.913 45.455 0.00 0.00 38.55 3.61
219 220 4.033358 CGAACTAGATGGAATGAGTTGCAC 59.967 45.833 0.00 0.00 38.55 4.57
225 226 5.046529 CAGAACCGAACTAGATGGAATGAG 58.953 45.833 0.00 0.00 0.00 2.90
235 236 4.690748 TGAGCATTTTCAGAACCGAACTAG 59.309 41.667 0.00 0.00 0.00 2.57
236 237 4.637276 TGAGCATTTTCAGAACCGAACTA 58.363 39.130 0.00 0.00 0.00 2.24
237 238 3.476552 TGAGCATTTTCAGAACCGAACT 58.523 40.909 0.00 0.00 0.00 3.01
238 239 3.251004 ACTGAGCATTTTCAGAACCGAAC 59.749 43.478 9.78 0.00 45.95 3.95
239 240 3.476552 ACTGAGCATTTTCAGAACCGAA 58.523 40.909 9.78 0.00 45.95 4.30
240 241 3.126001 ACTGAGCATTTTCAGAACCGA 57.874 42.857 9.78 0.00 45.95 4.69
241 242 3.003689 ACAACTGAGCATTTTCAGAACCG 59.996 43.478 9.78 0.00 45.95 4.44
243 244 7.327032 GGAATTACAACTGAGCATTTTCAGAAC 59.673 37.037 9.78 0.00 45.95 3.01
244 245 7.231317 AGGAATTACAACTGAGCATTTTCAGAA 59.769 33.333 9.78 0.00 45.95 3.02
245 246 6.716628 AGGAATTACAACTGAGCATTTTCAGA 59.283 34.615 9.78 0.00 45.95 3.27
247 248 6.899393 AGGAATTACAACTGAGCATTTTCA 57.101 33.333 0.00 0.00 0.00 2.69
248 249 7.597386 AGAAGGAATTACAACTGAGCATTTTC 58.403 34.615 0.00 0.00 0.00 2.29
249 250 7.530426 AGAAGGAATTACAACTGAGCATTTT 57.470 32.000 0.00 0.00 0.00 1.82
255 256 7.736447 ACAGAAAGAAGGAATTACAACTGAG 57.264 36.000 0.00 0.00 0.00 3.35
258 259 6.321181 TGCAACAGAAAGAAGGAATTACAACT 59.679 34.615 0.00 0.00 0.00 3.16
261 262 6.899393 ATGCAACAGAAAGAAGGAATTACA 57.101 33.333 0.00 0.00 0.00 2.41
330 331 9.970395 TTGAACATCATATGAAGCATTAATTCC 57.030 29.630 9.99 0.00 0.00 3.01
385 386 4.765273 TCTTCTGCTTGTTGTCAGTACAA 58.235 39.130 0.00 0.00 43.32 2.41
386 387 4.400529 TCTTCTGCTTGTTGTCAGTACA 57.599 40.909 0.00 0.00 0.00 2.90
387 388 5.277538 CCTTTCTTCTGCTTGTTGTCAGTAC 60.278 44.000 0.00 0.00 0.00 2.73
388 389 4.816385 CCTTTCTTCTGCTTGTTGTCAGTA 59.184 41.667 0.00 0.00 0.00 2.74
389 390 3.629398 CCTTTCTTCTGCTTGTTGTCAGT 59.371 43.478 0.00 0.00 0.00 3.41
390 391 3.879295 TCCTTTCTTCTGCTTGTTGTCAG 59.121 43.478 0.00 0.00 0.00 3.51
391 392 3.884895 TCCTTTCTTCTGCTTGTTGTCA 58.115 40.909 0.00 0.00 0.00 3.58
392 393 5.218139 CAATCCTTTCTTCTGCTTGTTGTC 58.782 41.667 0.00 0.00 0.00 3.18
393 394 4.646492 ACAATCCTTTCTTCTGCTTGTTGT 59.354 37.500 0.00 0.00 0.00 3.32
394 395 5.192327 ACAATCCTTTCTTCTGCTTGTTG 57.808 39.130 0.00 0.00 0.00 3.33
395 396 4.889409 TGACAATCCTTTCTTCTGCTTGTT 59.111 37.500 0.00 0.00 0.00 2.83
396 397 4.464008 TGACAATCCTTTCTTCTGCTTGT 58.536 39.130 0.00 0.00 0.00 3.16
397 398 5.399858 CATGACAATCCTTTCTTCTGCTTG 58.600 41.667 0.00 0.00 0.00 4.01
398 399 4.461781 CCATGACAATCCTTTCTTCTGCTT 59.538 41.667 0.00 0.00 0.00 3.91
399 400 4.015084 CCATGACAATCCTTTCTTCTGCT 58.985 43.478 0.00 0.00 0.00 4.24
400 401 3.760684 ACCATGACAATCCTTTCTTCTGC 59.239 43.478 0.00 0.00 0.00 4.26
401 402 5.005740 TGACCATGACAATCCTTTCTTCTG 58.994 41.667 0.00 0.00 0.00 3.02
402 403 5.246981 TGACCATGACAATCCTTTCTTCT 57.753 39.130 0.00 0.00 0.00 2.85
403 404 4.397417 CCTGACCATGACAATCCTTTCTTC 59.603 45.833 0.00 0.00 0.00 2.87
404 405 4.338879 CCTGACCATGACAATCCTTTCTT 58.661 43.478 0.00 0.00 0.00 2.52
405 406 3.875369 GCCTGACCATGACAATCCTTTCT 60.875 47.826 0.00 0.00 0.00 2.52
406 407 2.424956 GCCTGACCATGACAATCCTTTC 59.575 50.000 0.00 0.00 0.00 2.62
407 408 2.042162 AGCCTGACCATGACAATCCTTT 59.958 45.455 0.00 0.00 0.00 3.11
408 409 1.637553 AGCCTGACCATGACAATCCTT 59.362 47.619 0.00 0.00 0.00 3.36
409 410 1.293062 AGCCTGACCATGACAATCCT 58.707 50.000 0.00 0.00 0.00 3.24
410 411 2.134789 AAGCCTGACCATGACAATCC 57.865 50.000 0.00 0.00 0.00 3.01
419 420 1.650242 TTGGGACCAAAGCCTGACCA 61.650 55.000 0.32 0.00 32.44 4.02
426 427 7.114153 CACAAACAAAAATTTGGGACCAAAGC 61.114 38.462 19.96 0.00 44.34 3.51
429 430 5.316987 ACACAAACAAAAATTTGGGACCAA 58.683 33.333 7.45 0.00 44.34 3.67
438 439 5.122082 CAGTGCCTCAACACAAACAAAAATT 59.878 36.000 0.00 0.00 43.23 1.82
439 440 4.630940 CAGTGCCTCAACACAAACAAAAAT 59.369 37.500 0.00 0.00 43.23 1.82
445 446 1.388547 TCCAGTGCCTCAACACAAAC 58.611 50.000 0.00 0.00 43.23 2.93
446 447 1.748493 GTTCCAGTGCCTCAACACAAA 59.252 47.619 0.00 0.00 43.23 2.83
449 450 0.947244 CAGTTCCAGTGCCTCAACAC 59.053 55.000 0.00 0.00 41.02 3.32
461 463 0.895100 GAACATGGCTGGCAGTTCCA 60.895 55.000 23.24 15.95 44.18 3.53
490 492 3.258372 AGCTAAACATCTTGTCAGTCGGA 59.742 43.478 0.00 0.00 0.00 4.55
495 497 4.694509 AGAAGCAGCTAAACATCTTGTCAG 59.305 41.667 0.00 0.00 0.00 3.51
499 501 4.164294 GCAAGAAGCAGCTAAACATCTTG 58.836 43.478 22.04 22.04 44.00 3.02
500 502 3.120060 CGCAAGAAGCAGCTAAACATCTT 60.120 43.478 0.00 0.00 46.13 2.40
502 504 2.778659 CGCAAGAAGCAGCTAAACATC 58.221 47.619 0.00 0.00 46.13 3.06
520 1093 0.947180 TGGAAAGTAGCAACCGTCGC 60.947 55.000 0.00 0.00 0.00 5.19
524 1097 4.155826 TGAATGAATGGAAAGTAGCAACCG 59.844 41.667 0.00 0.00 0.00 4.44
536 1109 4.222336 ACAACCACCTTTGAATGAATGGA 58.778 39.130 7.86 0.00 33.79 3.41
542 1115 4.122143 ACACAACAACCACCTTTGAATG 57.878 40.909 0.00 0.00 0.00 2.67
555 1128 8.760569 CATGCAATCTACGTATATACACAACAA 58.239 33.333 13.22 0.00 0.00 2.83
557 1130 7.621426 GCCATGCAATCTACGTATATACACAAC 60.621 40.741 13.22 0.00 0.00 3.32
561 1134 6.031751 TGCCATGCAATCTACGTATATACA 57.968 37.500 13.22 0.00 34.76 2.29
562 1135 6.961359 TTGCCATGCAATCTACGTATATAC 57.039 37.500 2.53 2.53 43.99 1.47
664 1415 7.924103 ATCTTTAGGCACACTTTTAAAAACG 57.076 32.000 1.66 0.00 0.00 3.60
684 1435 2.299013 TCACACTCGCTGTACCAATCTT 59.701 45.455 0.00 0.00 0.00 2.40
685 1436 1.893137 TCACACTCGCTGTACCAATCT 59.107 47.619 0.00 0.00 0.00 2.40
805 1556 9.319143 CAACATTAAGTTTTACAAATCCCACAA 57.681 29.630 0.00 0.00 38.74 3.33
850 1601 2.884639 TCAAAAGTGCCCTTAAGCTGAC 59.115 45.455 0.00 0.00 0.00 3.51
859 1610 2.282462 CCGCCTCAAAAGTGCCCT 60.282 61.111 0.00 0.00 0.00 5.19
867 1618 0.183971 TCCCTGAAAACCGCCTCAAA 59.816 50.000 0.00 0.00 0.00 2.69
871 1622 0.625849 ATCATCCCTGAAAACCGCCT 59.374 50.000 0.00 0.00 34.37 5.52
878 1636 6.440010 TGAATTTGCCTTTATCATCCCTGAAA 59.560 34.615 0.00 0.00 34.37 2.69
879 1637 5.957168 TGAATTTGCCTTTATCATCCCTGAA 59.043 36.000 0.00 0.00 34.37 3.02
896 1654 7.870509 TCTCATTCCTCCTACAATGAATTTG 57.129 36.000 0.00 0.00 38.30 2.32
907 1665 6.183361 ACGAGTCTATCTTCTCATTCCTCCTA 60.183 42.308 0.00 0.00 0.00 2.94
911 1669 5.067153 CACACGAGTCTATCTTCTCATTCCT 59.933 44.000 0.00 0.00 0.00 3.36
930 1695 2.393768 GCCAGGACATCTGCACACG 61.394 63.158 0.00 0.00 42.05 4.49
934 1699 4.783621 GCCGCCAGGACATCTGCA 62.784 66.667 0.00 0.00 42.05 4.41
1007 1772 9.430623 TCATATTGTCAGAATTAACGAAAGACA 57.569 29.630 0.00 0.00 33.23 3.41
1033 1800 6.106673 CACTCTTTATGGTGTCGATAACCTT 58.893 40.000 18.01 14.73 38.60 3.50
1047 1814 4.122776 CGGAACATCCTCCACTCTTTATG 58.877 47.826 0.00 0.00 34.91 1.90
1050 1817 1.339151 GCGGAACATCCTCCACTCTTT 60.339 52.381 0.00 0.00 34.91 2.52
1056 1823 0.250234 CTCTTGCGGAACATCCTCCA 59.750 55.000 0.00 0.00 34.91 3.86
1084 1851 3.126858 TGATAGCAGTCATCAAAAACCGC 59.873 43.478 0.00 0.00 29.55 5.68
1095 1862 2.359848 GCATGCCAAATGATAGCAGTCA 59.640 45.455 6.36 0.00 40.40 3.41
1128 1895 4.358494 ACTCCAACGTTCGAATCTAGAG 57.642 45.455 0.00 7.31 0.00 2.43
1142 1909 5.119694 CCCTATTTGCTTCTCTACTCCAAC 58.880 45.833 0.00 0.00 0.00 3.77
1146 1913 5.303333 AGCTACCCTATTTGCTTCTCTACTC 59.697 44.000 0.00 0.00 30.96 2.59
1148 1915 5.069251 TGAGCTACCCTATTTGCTTCTCTAC 59.931 44.000 0.00 0.00 35.76 2.59
1163 1930 3.068873 CCTAGTCAGTTCATGAGCTACCC 59.931 52.174 12.11 3.31 39.07 3.69
1239 2006 5.692928 ACATCGTCTATGAGTAGGGTTACT 58.307 41.667 0.00 0.00 42.79 2.24
1323 2382 3.431673 TGTGAACCATTGATGTAGGCA 57.568 42.857 0.00 0.00 0.00 4.75
1349 2408 6.605471 TGGTAGATCAACACACTCACTATT 57.395 37.500 0.00 0.00 0.00 1.73
1358 2417 2.771943 GGGGAGATGGTAGATCAACACA 59.228 50.000 0.00 0.00 0.00 3.72
1360 2419 3.421394 AGGGGAGATGGTAGATCAACA 57.579 47.619 0.00 0.00 0.00 3.33
1527 2587 4.990426 ACCGGCTTCAATTGAATTCAAAAG 59.010 37.500 23.91 21.55 39.55 2.27
1586 2647 0.901827 TCTTATCTGGCCGAGTGCAA 59.098 50.000 0.00 0.00 43.89 4.08
1591 2652 0.250081 GCCCTTCTTATCTGGCCGAG 60.250 60.000 0.00 0.00 37.94 4.63
1592 2653 0.980754 TGCCCTTCTTATCTGGCCGA 60.981 55.000 0.00 0.00 43.35 5.54
1597 2658 0.541863 ACCGGTGCCCTTCTTATCTG 59.458 55.000 6.12 0.00 0.00 2.90
1598 2659 1.286248 AACCGGTGCCCTTCTTATCT 58.714 50.000 8.52 0.00 0.00 1.98
1635 2727 4.611310 ATTCTGAGACAACAATGATGCG 57.389 40.909 0.00 0.00 0.00 4.73
1636 2728 6.317140 TCCTAATTCTGAGACAACAATGATGC 59.683 38.462 0.00 0.00 0.00 3.91
1652 3793 6.890268 GGACTGGGTAAACAAATCCTAATTCT 59.110 38.462 0.00 0.00 0.00 2.40
1709 3851 4.807304 GGCATAAGCATCAAACCAAATCTG 59.193 41.667 0.00 0.00 44.61 2.90
1801 4292 1.020861 TACGGAGACTCTTACGCGCA 61.021 55.000 5.73 0.00 0.00 6.09
1802 4293 0.307146 ATACGGAGACTCTTACGCGC 59.693 55.000 5.73 0.00 0.00 6.86
1803 4294 1.070041 GGATACGGAGACTCTTACGCG 60.070 57.143 3.53 3.53 0.00 6.01
1804 4295 1.945394 TGGATACGGAGACTCTTACGC 59.055 52.381 1.74 0.00 42.51 4.42
1805 4296 2.941064 TGTGGATACGGAGACTCTTACG 59.059 50.000 1.74 0.15 42.51 3.18
1831 4835 4.495422 GAAGAGAGCAGAATACGGTCAAA 58.505 43.478 0.00 0.00 33.29 2.69
1832 4836 3.427638 CGAAGAGAGCAGAATACGGTCAA 60.428 47.826 0.00 0.00 33.29 3.18
1835 4839 1.202313 GCGAAGAGAGCAGAATACGGT 60.202 52.381 0.00 0.00 34.19 4.83
1841 4845 1.840737 AGGTAGCGAAGAGAGCAGAA 58.159 50.000 0.00 0.00 37.01 3.02
1853 4857 4.920640 TTCTCAGAGGAATAAGGTAGCG 57.079 45.455 0.00 0.00 0.00 4.26
1865 4869 5.096443 AGCCACTCTATTTTTCTCAGAGG 57.904 43.478 0.00 0.00 40.12 3.69
1869 4873 7.050377 CCTGATAAGCCACTCTATTTTTCTCA 58.950 38.462 0.00 0.00 0.00 3.27
1880 4884 1.009829 CAACGCCTGATAAGCCACTC 58.990 55.000 0.00 0.00 0.00 3.51
1883 4887 0.607762 TTGCAACGCCTGATAAGCCA 60.608 50.000 0.00 0.00 0.00 4.75
1947 4951 2.185310 GACCCGGATGCCAGACAACT 62.185 60.000 0.73 0.00 0.00 3.16
1950 4954 1.971505 GATGACCCGGATGCCAGACA 61.972 60.000 0.73 0.00 0.00 3.41
1955 4959 0.107214 TTCAAGATGACCCGGATGCC 60.107 55.000 0.73 0.00 0.00 4.40
1970 4974 5.185454 AGTGTTCTCATGTGACAAGTTCAA 58.815 37.500 0.00 0.00 35.39 2.69
1976 4980 4.096231 CACCAAAGTGTTCTCATGTGACAA 59.904 41.667 0.00 0.00 39.30 3.18
1977 4981 3.627123 CACCAAAGTGTTCTCATGTGACA 59.373 43.478 0.00 0.00 39.30 3.58
1978 4982 3.003689 CCACCAAAGTGTTCTCATGTGAC 59.996 47.826 0.00 0.00 42.88 3.67
1979 4983 3.213506 CCACCAAAGTGTTCTCATGTGA 58.786 45.455 0.00 0.00 42.88 3.58
1980 4984 2.287788 GCCACCAAAGTGTTCTCATGTG 60.288 50.000 0.00 0.00 42.88 3.21
1981 4985 1.956477 GCCACCAAAGTGTTCTCATGT 59.044 47.619 0.00 0.00 42.88 3.21
1982 4986 1.955778 TGCCACCAAAGTGTTCTCATG 59.044 47.619 0.00 0.00 42.88 3.07
1983 4987 2.363306 TGCCACCAAAGTGTTCTCAT 57.637 45.000 0.00 0.00 42.88 2.90
1984 4988 2.136298 TTGCCACCAAAGTGTTCTCA 57.864 45.000 0.00 0.00 42.88 3.27
1985 4989 2.427095 AGTTTGCCACCAAAGTGTTCTC 59.573 45.455 0.00 0.00 41.73 2.87
1986 4990 2.456577 AGTTTGCCACCAAAGTGTTCT 58.543 42.857 0.00 0.00 41.73 3.01
1987 4991 2.959507 AGTTTGCCACCAAAGTGTTC 57.040 45.000 0.00 0.00 41.73 3.18
1988 4992 4.221924 AGTTTAGTTTGCCACCAAAGTGTT 59.778 37.500 6.73 0.00 42.84 3.32
1989 4993 3.767131 AGTTTAGTTTGCCACCAAAGTGT 59.233 39.130 6.73 0.00 42.84 3.55
1990 4994 4.385358 AGTTTAGTTTGCCACCAAAGTG 57.615 40.909 6.73 0.00 42.84 3.16
1991 4995 4.382577 CCAAGTTTAGTTTGCCACCAAAGT 60.383 41.667 2.54 2.54 44.54 2.66
1992 4996 4.119136 CCAAGTTTAGTTTGCCACCAAAG 58.881 43.478 0.00 0.00 41.32 2.77
1993 4997 3.680196 GCCAAGTTTAGTTTGCCACCAAA 60.680 43.478 0.00 0.00 38.56 3.28
1994 4998 2.159028 GCCAAGTTTAGTTTGCCACCAA 60.159 45.455 0.00 0.00 0.00 3.67
1995 4999 1.410882 GCCAAGTTTAGTTTGCCACCA 59.589 47.619 0.00 0.00 0.00 4.17
1996 5000 1.410882 TGCCAAGTTTAGTTTGCCACC 59.589 47.619 0.00 0.00 0.00 4.61
1997 5001 2.159170 TGTGCCAAGTTTAGTTTGCCAC 60.159 45.455 0.00 0.00 35.23 5.01
1998 5002 2.103373 TGTGCCAAGTTTAGTTTGCCA 58.897 42.857 0.00 0.00 0.00 4.92
1999 5003 2.159170 TGTGTGCCAAGTTTAGTTTGCC 60.159 45.455 0.00 0.00 0.00 4.52
2000 5004 3.115554 CTGTGTGCCAAGTTTAGTTTGC 58.884 45.455 0.00 0.00 0.00 3.68
2001 5005 3.130340 ACCTGTGTGCCAAGTTTAGTTTG 59.870 43.478 0.00 0.00 0.00 2.93
2002 5006 3.361786 ACCTGTGTGCCAAGTTTAGTTT 58.638 40.909 0.00 0.00 0.00 2.66
2003 5007 3.012934 ACCTGTGTGCCAAGTTTAGTT 57.987 42.857 0.00 0.00 0.00 2.24
2004 5008 2.729028 ACCTGTGTGCCAAGTTTAGT 57.271 45.000 0.00 0.00 0.00 2.24
2005 5009 2.032030 CGAACCTGTGTGCCAAGTTTAG 60.032 50.000 0.00 0.00 27.72 1.85
2006 5010 1.944024 CGAACCTGTGTGCCAAGTTTA 59.056 47.619 0.00 0.00 27.72 2.01
2007 5011 0.738389 CGAACCTGTGTGCCAAGTTT 59.262 50.000 0.00 0.00 27.72 2.66
2008 5012 1.724582 GCGAACCTGTGTGCCAAGTT 61.725 55.000 0.00 0.00 30.28 2.66
2009 5013 2.186826 GCGAACCTGTGTGCCAAGT 61.187 57.895 0.00 0.00 0.00 3.16
2010 5014 2.639286 GCGAACCTGTGTGCCAAG 59.361 61.111 0.00 0.00 0.00 3.61
2011 5015 2.904866 GGCGAACCTGTGTGCCAA 60.905 61.111 7.86 0.00 46.76 4.52
2013 5017 4.947147 TGGGCGAACCTGTGTGCC 62.947 66.667 4.85 4.85 46.82 5.01
2014 5018 2.904866 TTGGGCGAACCTGTGTGC 60.905 61.111 0.00 0.00 41.11 4.57
2015 5019 1.507141 GACTTGGGCGAACCTGTGTG 61.507 60.000 0.00 0.00 41.11 3.82
2016 5020 1.227853 GACTTGGGCGAACCTGTGT 60.228 57.895 0.00 0.00 41.11 3.72
2017 5021 1.966451 GGACTTGGGCGAACCTGTG 60.966 63.158 0.00 0.00 41.11 3.66
2018 5022 1.990160 TTGGACTTGGGCGAACCTGT 61.990 55.000 0.00 0.00 41.11 4.00
2019 5023 0.821711 TTTGGACTTGGGCGAACCTG 60.822 55.000 0.00 0.00 41.11 4.00
2020 5024 0.112412 ATTTGGACTTGGGCGAACCT 59.888 50.000 0.00 0.00 41.11 3.50
2021 5025 0.966179 AATTTGGACTTGGGCGAACC 59.034 50.000 0.00 0.00 40.81 3.62
2022 5026 1.067846 GGAATTTGGACTTGGGCGAAC 60.068 52.381 0.00 0.00 0.00 3.95
2023 5027 1.203001 AGGAATTTGGACTTGGGCGAA 60.203 47.619 0.00 0.00 0.00 4.70
2024 5028 0.404040 AGGAATTTGGACTTGGGCGA 59.596 50.000 0.00 0.00 0.00 5.54
2025 5029 1.067635 CAAGGAATTTGGACTTGGGCG 60.068 52.381 0.00 0.00 38.29 6.13
2026 5030 1.338105 GCAAGGAATTTGGACTTGGGC 60.338 52.381 0.00 0.00 41.33 5.36
2027 5031 1.969923 TGCAAGGAATTTGGACTTGGG 59.030 47.619 0.00 0.00 41.33 4.12
2033 5037 2.627699 GTTCTGGTGCAAGGAATTTGGA 59.372 45.455 0.00 0.00 37.26 3.53
2034 5038 2.607771 CGTTCTGGTGCAAGGAATTTGG 60.608 50.000 0.00 0.00 37.26 3.28
2035 5039 2.034558 ACGTTCTGGTGCAAGGAATTTG 59.965 45.455 0.00 0.00 39.88 2.32
2036 5040 2.034558 CACGTTCTGGTGCAAGGAATTT 59.965 45.455 0.00 0.00 0.00 1.82
2037 5041 1.608590 CACGTTCTGGTGCAAGGAATT 59.391 47.619 0.00 0.00 0.00 2.17
2038 5042 1.202758 TCACGTTCTGGTGCAAGGAAT 60.203 47.619 0.00 0.00 37.83 3.01
2039 5043 0.179234 TCACGTTCTGGTGCAAGGAA 59.821 50.000 0.00 0.00 37.83 3.36
2040 5044 0.396435 ATCACGTTCTGGTGCAAGGA 59.604 50.000 0.00 0.00 37.83 3.36
2041 5045 1.238439 AATCACGTTCTGGTGCAAGG 58.762 50.000 0.00 0.00 37.83 3.61
2042 5046 3.364964 GGTAAATCACGTTCTGGTGCAAG 60.365 47.826 0.00 0.00 37.83 4.01
2043 5047 2.550606 GGTAAATCACGTTCTGGTGCAA 59.449 45.455 0.00 0.00 37.83 4.08
2044 5048 2.147958 GGTAAATCACGTTCTGGTGCA 58.852 47.619 0.00 0.00 37.83 4.57
2045 5049 2.147958 TGGTAAATCACGTTCTGGTGC 58.852 47.619 0.00 0.00 37.83 5.01
2046 5050 5.063438 CACTATGGTAAATCACGTTCTGGTG 59.937 44.000 0.00 0.00 39.29 4.17
2047 5051 5.175859 CACTATGGTAAATCACGTTCTGGT 58.824 41.667 0.00 0.00 0.00 4.00
2048 5052 4.034048 GCACTATGGTAAATCACGTTCTGG 59.966 45.833 0.00 0.00 0.00 3.86
2049 5053 4.034048 GGCACTATGGTAAATCACGTTCTG 59.966 45.833 0.00 0.00 0.00 3.02
2050 5054 4.189231 GGCACTATGGTAAATCACGTTCT 58.811 43.478 0.00 0.00 0.00 3.01
2051 5055 3.936453 TGGCACTATGGTAAATCACGTTC 59.064 43.478 0.00 0.00 0.00 3.95
2052 5056 3.687698 GTGGCACTATGGTAAATCACGTT 59.312 43.478 11.13 0.00 0.00 3.99
2053 5057 3.267483 GTGGCACTATGGTAAATCACGT 58.733 45.455 11.13 0.00 0.00 4.49
2054 5058 2.612212 GGTGGCACTATGGTAAATCACG 59.388 50.000 18.45 0.00 0.00 4.35
2055 5059 3.627577 CAGGTGGCACTATGGTAAATCAC 59.372 47.826 18.45 0.00 0.00 3.06
2056 5060 3.521531 TCAGGTGGCACTATGGTAAATCA 59.478 43.478 18.45 0.00 0.00 2.57
2057 5061 4.150897 TCAGGTGGCACTATGGTAAATC 57.849 45.455 18.45 0.00 0.00 2.17
2058 5062 4.526970 CTTCAGGTGGCACTATGGTAAAT 58.473 43.478 18.45 0.00 0.00 1.40
2059 5063 3.872240 GCTTCAGGTGGCACTATGGTAAA 60.872 47.826 18.45 6.69 0.00 2.01
2060 5064 2.355716 GCTTCAGGTGGCACTATGGTAA 60.356 50.000 18.45 7.32 0.00 2.85
2061 5065 1.209504 GCTTCAGGTGGCACTATGGTA 59.790 52.381 18.45 7.93 0.00 3.25
2062 5066 0.035056 GCTTCAGGTGGCACTATGGT 60.035 55.000 18.45 0.00 0.00 3.55
2063 5067 0.749454 GGCTTCAGGTGGCACTATGG 60.749 60.000 18.45 4.91 0.00 2.74
2064 5068 1.091771 CGGCTTCAGGTGGCACTATG 61.092 60.000 18.45 16.20 0.00 2.23
2065 5069 1.221840 CGGCTTCAGGTGGCACTAT 59.778 57.895 18.45 3.66 0.00 2.12
2066 5070 2.662596 CGGCTTCAGGTGGCACTA 59.337 61.111 18.45 0.40 0.00 2.74
2071 5075 2.594303 TTGTGCGGCTTCAGGTGG 60.594 61.111 0.00 0.00 0.00 4.61
2072 5076 2.620112 CCTTGTGCGGCTTCAGGTG 61.620 63.158 0.00 0.00 0.00 4.00
2073 5077 2.281761 CCTTGTGCGGCTTCAGGT 60.282 61.111 0.00 0.00 0.00 4.00
2074 5078 3.058160 CCCTTGTGCGGCTTCAGG 61.058 66.667 0.00 3.29 0.00 3.86
2075 5079 2.463589 TACCCCTTGTGCGGCTTCAG 62.464 60.000 0.00 0.00 0.00 3.02
2076 5080 2.058125 TTACCCCTTGTGCGGCTTCA 62.058 55.000 0.00 0.00 0.00 3.02
2077 5081 0.891904 TTTACCCCTTGTGCGGCTTC 60.892 55.000 0.00 0.00 0.00 3.86
2078 5082 0.893727 CTTTACCCCTTGTGCGGCTT 60.894 55.000 0.00 0.00 0.00 4.35
2079 5083 1.303317 CTTTACCCCTTGTGCGGCT 60.303 57.895 0.00 0.00 0.00 5.52
2080 5084 1.602605 ACTTTACCCCTTGTGCGGC 60.603 57.895 0.00 0.00 0.00 6.53
2081 5085 1.241315 CCACTTTACCCCTTGTGCGG 61.241 60.000 0.00 0.00 0.00 5.69
2082 5086 1.241315 CCCACTTTACCCCTTGTGCG 61.241 60.000 0.00 0.00 0.00 5.34
2083 5087 0.111639 TCCCACTTTACCCCTTGTGC 59.888 55.000 0.00 0.00 0.00 4.57
2084 5088 1.144093 TGTCCCACTTTACCCCTTGTG 59.856 52.381 0.00 0.00 0.00 3.33
2085 5089 1.525175 TGTCCCACTTTACCCCTTGT 58.475 50.000 0.00 0.00 0.00 3.16
2086 5090 2.899303 ATGTCCCACTTTACCCCTTG 57.101 50.000 0.00 0.00 0.00 3.61
2087 5091 5.546035 AATTATGTCCCACTTTACCCCTT 57.454 39.130 0.00 0.00 0.00 3.95
2088 5092 5.546035 AAATTATGTCCCACTTTACCCCT 57.454 39.130 0.00 0.00 0.00 4.79
2089 5093 5.105106 CCAAAATTATGTCCCACTTTACCCC 60.105 44.000 0.00 0.00 0.00 4.95
2090 5094 5.482526 ACCAAAATTATGTCCCACTTTACCC 59.517 40.000 0.00 0.00 0.00 3.69
2091 5095 6.599356 ACCAAAATTATGTCCCACTTTACC 57.401 37.500 0.00 0.00 0.00 2.85
2092 5096 8.896320 AAAACCAAAATTATGTCCCACTTTAC 57.104 30.769 0.00 0.00 0.00 2.01
2122 5126 8.610896 CAAAATTATGGCTGTCTGTTTCAAAAA 58.389 29.630 0.00 0.00 0.00 1.94
2123 5127 7.768120 ACAAAATTATGGCTGTCTGTTTCAAAA 59.232 29.630 0.00 0.00 0.00 2.44
2124 5128 7.271511 ACAAAATTATGGCTGTCTGTTTCAAA 58.728 30.769 0.00 0.00 0.00 2.69
2125 5129 6.815089 ACAAAATTATGGCTGTCTGTTTCAA 58.185 32.000 0.00 0.00 0.00 2.69
2126 5130 6.403866 ACAAAATTATGGCTGTCTGTTTCA 57.596 33.333 0.00 0.00 0.00 2.69
2127 5131 7.816640 TCTACAAAATTATGGCTGTCTGTTTC 58.183 34.615 0.00 0.00 0.00 2.78
2128 5132 7.759489 TCTACAAAATTATGGCTGTCTGTTT 57.241 32.000 0.00 0.00 0.00 2.83
2129 5133 7.759489 TTCTACAAAATTATGGCTGTCTGTT 57.241 32.000 0.00 0.00 0.00 3.16
2130 5134 7.573096 CGTTTCTACAAAATTATGGCTGTCTGT 60.573 37.037 0.00 0.00 0.00 3.41
2131 5135 6.742718 CGTTTCTACAAAATTATGGCTGTCTG 59.257 38.462 0.00 0.00 0.00 3.51
2132 5136 6.653320 TCGTTTCTACAAAATTATGGCTGTCT 59.347 34.615 0.00 0.00 0.00 3.41
2133 5137 6.741358 GTCGTTTCTACAAAATTATGGCTGTC 59.259 38.462 0.00 0.00 0.00 3.51
2134 5138 6.349033 GGTCGTTTCTACAAAATTATGGCTGT 60.349 38.462 0.00 0.00 0.00 4.40
2135 5139 6.027749 GGTCGTTTCTACAAAATTATGGCTG 58.972 40.000 0.00 0.00 0.00 4.85
2136 5140 5.944007 AGGTCGTTTCTACAAAATTATGGCT 59.056 36.000 0.00 0.00 0.00 4.75
2137 5141 6.190954 AGGTCGTTTCTACAAAATTATGGC 57.809 37.500 0.00 0.00 0.00 4.40
2138 5142 6.373216 TGGAGGTCGTTTCTACAAAATTATGG 59.627 38.462 0.00 0.00 0.00 2.74
2139 5143 7.372451 TGGAGGTCGTTTCTACAAAATTATG 57.628 36.000 0.00 0.00 0.00 1.90
2140 5144 7.989416 TTGGAGGTCGTTTCTACAAAATTAT 57.011 32.000 0.00 0.00 32.62 1.28
2141 5145 7.804843 TTTGGAGGTCGTTTCTACAAAATTA 57.195 32.000 9.23 0.00 40.79 1.40
2142 5146 6.702716 TTTGGAGGTCGTTTCTACAAAATT 57.297 33.333 9.23 0.00 40.79 1.82
2143 5147 6.715264 AGATTTGGAGGTCGTTTCTACAAAAT 59.285 34.615 13.51 6.31 45.00 1.82
2144 5148 6.059484 AGATTTGGAGGTCGTTTCTACAAAA 58.941 36.000 13.51 0.00 45.00 2.44
2145 5149 5.617252 AGATTTGGAGGTCGTTTCTACAAA 58.383 37.500 12.46 12.46 45.65 2.83
2146 5150 5.011738 AGAGATTTGGAGGTCGTTTCTACAA 59.988 40.000 0.00 0.00 33.62 2.41
2147 5151 4.527038 AGAGATTTGGAGGTCGTTTCTACA 59.473 41.667 0.00 0.00 0.00 2.74
2148 5152 5.074584 AGAGATTTGGAGGTCGTTTCTAC 57.925 43.478 0.00 0.00 0.00 2.59
2149 5153 5.740290 AAGAGATTTGGAGGTCGTTTCTA 57.260 39.130 0.00 0.00 0.00 2.10
2150 5154 4.625607 AAGAGATTTGGAGGTCGTTTCT 57.374 40.909 0.00 0.00 0.00 2.52
2151 5155 4.515567 ACAAAGAGATTTGGAGGTCGTTTC 59.484 41.667 5.77 0.00 36.30 2.78
2152 5156 4.461198 ACAAAGAGATTTGGAGGTCGTTT 58.539 39.130 5.77 0.00 36.30 3.60
2153 5157 4.065789 GACAAAGAGATTTGGAGGTCGTT 58.934 43.478 5.77 0.00 36.30 3.85
2154 5158 3.325135 AGACAAAGAGATTTGGAGGTCGT 59.675 43.478 5.77 0.00 36.30 4.34
2155 5159 3.931578 AGACAAAGAGATTTGGAGGTCG 58.068 45.455 5.77 0.00 36.30 4.79
2156 5160 5.532779 ACAAAGACAAAGAGATTTGGAGGTC 59.467 40.000 5.77 0.00 37.04 3.85
2157 5161 5.449553 ACAAAGACAAAGAGATTTGGAGGT 58.550 37.500 5.77 0.00 37.04 3.85
2158 5162 6.396829 AACAAAGACAAAGAGATTTGGAGG 57.603 37.500 5.77 0.00 37.04 4.30
2159 5163 6.920210 GGAAACAAAGACAAAGAGATTTGGAG 59.080 38.462 5.77 0.00 37.04 3.86
2160 5164 6.183360 GGGAAACAAAGACAAAGAGATTTGGA 60.183 38.462 5.77 0.00 37.04 3.53
2161 5165 5.985530 GGGAAACAAAGACAAAGAGATTTGG 59.014 40.000 5.77 0.00 37.04 3.28
2162 5166 6.809869 AGGGAAACAAAGACAAAGAGATTTG 58.190 36.000 0.00 0.00 38.35 2.32
2163 5167 6.607198 TGAGGGAAACAAAGACAAAGAGATTT 59.393 34.615 0.00 0.00 0.00 2.17
2164 5168 6.129179 TGAGGGAAACAAAGACAAAGAGATT 58.871 36.000 0.00 0.00 0.00 2.40
2165 5169 5.694995 TGAGGGAAACAAAGACAAAGAGAT 58.305 37.500 0.00 0.00 0.00 2.75
2166 5170 5.110814 TGAGGGAAACAAAGACAAAGAGA 57.889 39.130 0.00 0.00 0.00 3.10
2167 5171 7.445402 TCTTATGAGGGAAACAAAGACAAAGAG 59.555 37.037 0.00 0.00 0.00 2.85
2168 5172 7.287061 TCTTATGAGGGAAACAAAGACAAAGA 58.713 34.615 0.00 0.00 0.00 2.52
2169 5173 7.510549 TCTTATGAGGGAAACAAAGACAAAG 57.489 36.000 0.00 0.00 0.00 2.77
2170 5174 7.470009 GCTTCTTATGAGGGAAACAAAGACAAA 60.470 37.037 0.00 0.00 0.00 2.83
2171 5175 6.016276 GCTTCTTATGAGGGAAACAAAGACAA 60.016 38.462 0.00 0.00 0.00 3.18
2172 5176 5.473504 GCTTCTTATGAGGGAAACAAAGACA 59.526 40.000 0.00 0.00 0.00 3.41
2173 5177 5.106118 GGCTTCTTATGAGGGAAACAAAGAC 60.106 44.000 0.00 0.00 0.00 3.01
2174 5178 5.010282 GGCTTCTTATGAGGGAAACAAAGA 58.990 41.667 0.00 0.00 0.00 2.52
2175 5179 5.012893 AGGCTTCTTATGAGGGAAACAAAG 58.987 41.667 0.00 0.00 0.00 2.77
2176 5180 4.998051 AGGCTTCTTATGAGGGAAACAAA 58.002 39.130 0.00 0.00 0.00 2.83
2177 5181 4.289672 AGAGGCTTCTTATGAGGGAAACAA 59.710 41.667 0.00 0.00 0.00 2.83
2178 5182 3.846588 AGAGGCTTCTTATGAGGGAAACA 59.153 43.478 0.00 0.00 0.00 2.83
2179 5183 4.447290 GAGAGGCTTCTTATGAGGGAAAC 58.553 47.826 0.00 0.00 32.53 2.78
2180 5184 3.133003 CGAGAGGCTTCTTATGAGGGAAA 59.867 47.826 0.00 0.00 32.53 3.13
2181 5185 2.695666 CGAGAGGCTTCTTATGAGGGAA 59.304 50.000 0.00 0.00 32.53 3.97
2182 5186 2.311463 CGAGAGGCTTCTTATGAGGGA 58.689 52.381 0.00 0.00 32.53 4.20
2183 5187 1.270041 GCGAGAGGCTTCTTATGAGGG 60.270 57.143 0.00 0.00 39.11 4.30
2184 5188 2.147436 GCGAGAGGCTTCTTATGAGG 57.853 55.000 0.00 0.00 39.11 3.86
2195 5199 2.841988 ATGGGGAGAGCGAGAGGC 60.842 66.667 0.00 0.00 44.05 4.70
2196 5200 1.152567 AGATGGGGAGAGCGAGAGG 60.153 63.158 0.00 0.00 0.00 3.69
2197 5201 0.178992 AGAGATGGGGAGAGCGAGAG 60.179 60.000 0.00 0.00 0.00 3.20
2198 5202 0.260230 AAGAGATGGGGAGAGCGAGA 59.740 55.000 0.00 0.00 0.00 4.04
2199 5203 0.673437 GAAGAGATGGGGAGAGCGAG 59.327 60.000 0.00 0.00 0.00 5.03
2200 5204 0.260230 AGAAGAGATGGGGAGAGCGA 59.740 55.000 0.00 0.00 0.00 4.93
2201 5205 0.673437 GAGAAGAGATGGGGAGAGCG 59.327 60.000 0.00 0.00 0.00 5.03
2202 5206 2.086610 AGAGAAGAGATGGGGAGAGC 57.913 55.000 0.00 0.00 0.00 4.09
2203 5207 3.774216 ACAAAGAGAAGAGATGGGGAGAG 59.226 47.826 0.00 0.00 0.00 3.20
2204 5208 3.517100 CACAAAGAGAAGAGATGGGGAGA 59.483 47.826 0.00 0.00 0.00 3.71
2205 5209 3.370315 CCACAAAGAGAAGAGATGGGGAG 60.370 52.174 0.00 0.00 36.67 4.30
2206 5210 2.573462 CCACAAAGAGAAGAGATGGGGA 59.427 50.000 0.00 0.00 36.67 4.81
2207 5211 2.943199 GCCACAAAGAGAAGAGATGGGG 60.943 54.545 0.00 0.00 37.63 4.96
2208 5212 2.026449 AGCCACAAAGAGAAGAGATGGG 60.026 50.000 0.00 0.00 0.00 4.00
2209 5213 3.008330 CAGCCACAAAGAGAAGAGATGG 58.992 50.000 0.00 0.00 0.00 3.51
2210 5214 3.008330 CCAGCCACAAAGAGAAGAGATG 58.992 50.000 0.00 0.00 0.00 2.90
2211 5215 2.617532 GCCAGCCACAAAGAGAAGAGAT 60.618 50.000 0.00 0.00 0.00 2.75
2212 5216 1.271054 GCCAGCCACAAAGAGAAGAGA 60.271 52.381 0.00 0.00 0.00 3.10
2213 5217 1.163554 GCCAGCCACAAAGAGAAGAG 58.836 55.000 0.00 0.00 0.00 2.85
2214 5218 0.250901 GGCCAGCCACAAAGAGAAGA 60.251 55.000 3.12 0.00 35.81 2.87
2215 5219 0.251077 AGGCCAGCCACAAAGAGAAG 60.251 55.000 12.03 0.00 38.92 2.85
2216 5220 1.064003 TAGGCCAGCCACAAAGAGAA 58.936 50.000 12.03 0.00 38.92 2.87
2217 5221 0.324943 GTAGGCCAGCCACAAAGAGA 59.675 55.000 12.03 0.00 38.92 3.10
2218 5222 0.678048 GGTAGGCCAGCCACAAAGAG 60.678 60.000 12.03 0.00 38.92 2.85
2219 5223 1.133809 AGGTAGGCCAGCCACAAAGA 61.134 55.000 12.03 0.00 38.92 2.52
2220 5224 0.618458 TAGGTAGGCCAGCCACAAAG 59.382 55.000 12.03 0.00 38.92 2.77
2221 5225 0.618458 CTAGGTAGGCCAGCCACAAA 59.382 55.000 12.03 0.00 38.92 2.83
2222 5226 0.546747 ACTAGGTAGGCCAGCCACAA 60.547 55.000 12.03 0.00 38.92 3.33
2223 5227 1.080354 ACTAGGTAGGCCAGCCACA 59.920 57.895 12.03 0.00 38.92 4.17
2224 5228 0.976073 TCACTAGGTAGGCCAGCCAC 60.976 60.000 12.03 7.04 38.92 5.01
2225 5229 0.976073 GTCACTAGGTAGGCCAGCCA 60.976 60.000 12.03 0.00 38.92 4.75
2226 5230 0.688087 AGTCACTAGGTAGGCCAGCC 60.688 60.000 5.01 6.49 37.19 4.85
2227 5231 1.196012 AAGTCACTAGGTAGGCCAGC 58.804 55.000 5.01 0.09 37.19 4.85
2228 5232 3.983044 AAAAGTCACTAGGTAGGCCAG 57.017 47.619 5.01 0.00 37.19 4.85
2229 5233 3.649023 TGAAAAAGTCACTAGGTAGGCCA 59.351 43.478 5.01 0.00 37.19 5.36
2230 5234 4.281898 TGAAAAAGTCACTAGGTAGGCC 57.718 45.455 0.00 0.00 0.00 5.19
2231 5235 6.819397 AAATGAAAAAGTCACTAGGTAGGC 57.181 37.500 0.00 0.00 39.72 3.93
2232 5236 9.720769 TCTTAAATGAAAAAGTCACTAGGTAGG 57.279 33.333 0.00 0.00 39.72 3.18
2236 5240 9.846248 CCAATCTTAAATGAAAAAGTCACTAGG 57.154 33.333 0.00 0.00 39.72 3.02
2237 5241 9.346725 GCCAATCTTAAATGAAAAAGTCACTAG 57.653 33.333 0.00 0.00 39.72 2.57
2238 5242 8.303876 GGCCAATCTTAAATGAAAAAGTCACTA 58.696 33.333 0.00 0.00 39.72 2.74
2239 5243 7.015584 AGGCCAATCTTAAATGAAAAAGTCACT 59.984 33.333 5.01 0.00 39.72 3.41
2240 5244 7.154656 AGGCCAATCTTAAATGAAAAAGTCAC 58.845 34.615 5.01 0.00 39.72 3.67
2241 5245 7.301868 AGGCCAATCTTAAATGAAAAAGTCA 57.698 32.000 5.01 0.00 41.67 3.41
2242 5246 8.303876 TGTAGGCCAATCTTAAATGAAAAAGTC 58.696 33.333 5.01 0.00 0.00 3.01
2243 5247 8.088365 GTGTAGGCCAATCTTAAATGAAAAAGT 58.912 33.333 5.01 0.00 0.00 2.66
2244 5248 7.545615 GGTGTAGGCCAATCTTAAATGAAAAAG 59.454 37.037 5.01 0.00 0.00 2.27
2245 5249 7.234577 AGGTGTAGGCCAATCTTAAATGAAAAA 59.765 33.333 5.01 0.00 0.00 1.94
2246 5250 6.723977 AGGTGTAGGCCAATCTTAAATGAAAA 59.276 34.615 5.01 0.00 0.00 2.29
2247 5251 6.252995 AGGTGTAGGCCAATCTTAAATGAAA 58.747 36.000 5.01 0.00 0.00 2.69
2248 5252 5.826643 AGGTGTAGGCCAATCTTAAATGAA 58.173 37.500 5.01 0.00 0.00 2.57
2249 5253 5.450818 AGGTGTAGGCCAATCTTAAATGA 57.549 39.130 5.01 0.00 0.00 2.57
2250 5254 5.239525 GCTAGGTGTAGGCCAATCTTAAATG 59.760 44.000 5.01 0.00 0.00 2.32
2251 5255 5.377478 GCTAGGTGTAGGCCAATCTTAAAT 58.623 41.667 5.01 0.00 0.00 1.40
2252 5256 4.682320 CGCTAGGTGTAGGCCAATCTTAAA 60.682 45.833 5.01 0.00 0.00 1.52
2253 5257 3.181469 CGCTAGGTGTAGGCCAATCTTAA 60.181 47.826 5.01 0.00 0.00 1.85
2254 5258 2.364324 CGCTAGGTGTAGGCCAATCTTA 59.636 50.000 5.01 0.00 0.00 2.10
2255 5259 1.139058 CGCTAGGTGTAGGCCAATCTT 59.861 52.381 5.01 0.00 0.00 2.40
2256 5260 0.753262 CGCTAGGTGTAGGCCAATCT 59.247 55.000 5.01 0.00 0.00 2.40
2257 5261 0.750850 TCGCTAGGTGTAGGCCAATC 59.249 55.000 5.01 0.00 0.00 2.67
2258 5262 0.464452 GTCGCTAGGTGTAGGCCAAT 59.536 55.000 5.01 0.00 0.00 3.16
2259 5263 0.613853 AGTCGCTAGGTGTAGGCCAA 60.614 55.000 5.01 0.00 0.00 4.52
2260 5264 0.613853 AAGTCGCTAGGTGTAGGCCA 60.614 55.000 5.01 0.00 0.00 5.36
2261 5265 0.179108 CAAGTCGCTAGGTGTAGGCC 60.179 60.000 0.00 0.00 0.00 5.19
2262 5266 0.815734 TCAAGTCGCTAGGTGTAGGC 59.184 55.000 0.00 0.00 0.00 3.93
2263 5267 2.427453 ACATCAAGTCGCTAGGTGTAGG 59.573 50.000 0.00 0.00 0.00 3.18
2264 5268 3.784701 ACATCAAGTCGCTAGGTGTAG 57.215 47.619 0.00 0.00 0.00 2.74


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.