Multiple sequence alignment - TraesCS3B01G531400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G531400 chr3B 100.000 5046 0 0 1 5046 772395633 772400678 0.000000e+00 9319.0
1 TraesCS3B01G531400 chr3B 91.667 264 19 2 1159 1422 47158536 47158796 3.710000e-96 363.0
2 TraesCS3B01G531400 chr3B 98.611 72 1 0 1 72 774460988 774461059 1.470000e-25 128.0
3 TraesCS3B01G531400 chr3B 95.833 72 3 0 1 72 716297762 716297691 3.190000e-22 117.0
4 TraesCS3B01G531400 chr3A 90.262 2331 128 37 2587 4866 714154315 714156597 0.000000e+00 2955.0
5 TraesCS3B01G531400 chr3A 85.899 851 66 27 772 1576 714150654 714151496 0.000000e+00 857.0
6 TraesCS3B01G531400 chr3A 93.299 582 32 5 1572 2148 714151542 714152121 0.000000e+00 852.0
7 TraesCS3B01G531400 chr3A 94.521 438 20 1 2148 2585 714152160 714152593 0.000000e+00 673.0
8 TraesCS3B01G531400 chr3A 92.045 176 11 2 1159 1334 61799518 61799690 1.400000e-60 244.0
9 TraesCS3B01G531400 chr3A 89.130 46 5 0 99 144 730033722 730033767 1.960000e-04 58.4
10 TraesCS3B01G531400 chr3A 89.130 46 5 0 99 144 730441432 730441387 1.960000e-04 58.4
11 TraesCS3B01G531400 chr3A 89.130 46 5 0 99 144 730461610 730461565 1.960000e-04 58.4
12 TraesCS3B01G531400 chr3D 91.630 1828 109 18 2631 4456 578416217 578414432 0.000000e+00 2488.0
13 TraesCS3B01G531400 chr3D 93.734 782 46 3 2148 2926 578417002 578416221 0.000000e+00 1170.0
14 TraesCS3B01G531400 chr3D 88.508 583 53 5 1572 2148 578417619 578417045 0.000000e+00 693.0
15 TraesCS3B01G531400 chr3D 86.286 525 39 19 835 1337 578418402 578417889 1.600000e-149 540.0
16 TraesCS3B01G531400 chr3D 97.973 296 6 0 4570 4865 578414291 578413996 9.690000e-142 514.0
17 TraesCS3B01G531400 chr3D 100.000 31 0 0 4895 4925 9066350 9066320 1.960000e-04 58.4
18 TraesCS3B01G531400 chr1A 89.002 591 51 5 96 673 532264589 532265178 0.000000e+00 719.0
19 TraesCS3B01G531400 chr1A 92.045 176 11 2 1159 1334 388493470 388493298 1.400000e-60 244.0
20 TraesCS3B01G531400 chr1A 92.045 176 11 2 1159 1334 528586878 528587050 1.400000e-60 244.0
21 TraesCS3B01G531400 chr7D 88.488 582 54 4 104 673 228021019 228021599 0.000000e+00 691.0
22 TraesCS3B01G531400 chr7D 87.479 591 57 9 98 673 562103873 562104461 0.000000e+00 665.0
23 TraesCS3B01G531400 chr7D 86.532 594 62 9 96 673 22393166 22392575 5.510000e-179 638.0
24 TraesCS3B01G531400 chr7D 85.522 594 69 8 96 673 22343863 22343271 5.590000e-169 604.0
25 TraesCS3B01G531400 chr7D 90.476 63 4 2 89 150 84359778 84359839 1.160000e-11 82.4
26 TraesCS3B01G531400 chr7D 92.500 40 3 0 4887 4926 565352686 565352647 1.960000e-04 58.4
27 TraesCS3B01G531400 chr7D 96.774 31 1 0 4892 4922 62191423 62191453 9.000000e-03 52.8
28 TraesCS3B01G531400 chrUn 88.068 528 56 5 151 673 141694864 141694339 2.000000e-173 619.0
29 TraesCS3B01G531400 chrUn 89.130 46 5 0 99 144 358201764 358201719 1.960000e-04 58.4
30 TraesCS3B01G531400 chr2B 85.980 592 68 6 96 673 45548774 45548184 2.000000e-173 619.0
31 TraesCS3B01G531400 chr4A 85.522 594 70 7 93 673 728004593 728004003 1.550000e-169 606.0
32 TraesCS3B01G531400 chr4A 97.222 72 2 0 1 72 655670809 655670738 6.860000e-24 122.0
33 TraesCS3B01G531400 chr4A 97.222 72 2 0 1 72 689192656 689192585 6.860000e-24 122.0
34 TraesCS3B01G531400 chr4B 85.354 594 68 11 96 673 192754224 192754814 9.350000e-167 597.0
35 TraesCS3B01G531400 chr4B 95.588 68 3 0 1 68 189416272 189416339 5.340000e-20 110.0
36 TraesCS3B01G531400 chr4B 100.000 30 0 0 4895 4924 640476314 640476285 7.060000e-04 56.5
37 TraesCS3B01G531400 chr1B 85.481 489 54 5 1029 1509 599469126 599469605 1.260000e-135 494.0
38 TraesCS3B01G531400 chr1B 75.507 690 114 31 2972 3646 94228042 94227393 2.300000e-73 287.0
39 TraesCS3B01G531400 chr5A 92.614 176 10 2 1159 1334 241460183 241460011 3.020000e-62 250.0
40 TraesCS3B01G531400 chr2A 93.750 160 10 0 1175 1334 111273462 111273303 1.820000e-59 241.0
41 TraesCS3B01G531400 chr2A 77.519 129 21 4 100 220 643485017 643484889 2.520000e-08 71.3
42 TraesCS3B01G531400 chr5D 97.222 72 2 0 1 72 44605152 44605081 6.860000e-24 122.0
43 TraesCS3B01G531400 chr5D 91.111 45 4 0 100 144 558337560 558337604 1.520000e-05 62.1
44 TraesCS3B01G531400 chr6A 97.143 70 2 0 1 70 97024404 97024473 8.870000e-23 119.0
45 TraesCS3B01G531400 chr5B 95.833 72 3 0 1 72 106803276 106803347 3.190000e-22 117.0
46 TraesCS3B01G531400 chr5B 95.833 72 3 0 1 72 106804958 106805029 3.190000e-22 117.0
47 TraesCS3B01G531400 chr7A 96.154 52 2 0 93 144 424299386 424299335 9.000000e-13 86.1
48 TraesCS3B01G531400 chr6B 100.000 35 0 0 93 127 405867971 405868005 1.170000e-06 65.8
49 TraesCS3B01G531400 chr7B 97.222 36 1 0 4891 4926 504190097 504190132 1.520000e-05 62.1
50 TraesCS3B01G531400 chr7B 97.143 35 1 0 4892 4926 245070244 245070278 5.460000e-05 60.2
51 TraesCS3B01G531400 chr7B 90.909 44 4 0 4892 4935 466955371 466955414 5.460000e-05 60.2
52 TraesCS3B01G531400 chr7B 96.875 32 1 0 4895 4926 720828579 720828548 3.000000e-03 54.7
53 TraesCS3B01G531400 chr2D 100.000 32 0 0 4895 4926 430507695 430507664 5.460000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G531400 chr3B 772395633 772400678 5045 False 9319.00 9319 100.00000 1 5046 1 chr3B.!!$F2 5045
1 TraesCS3B01G531400 chr3A 714150654 714156597 5943 False 1334.25 2955 90.99525 772 4866 4 chr3A.!!$F3 4094
2 TraesCS3B01G531400 chr3D 578413996 578418402 4406 True 1081.00 2488 91.62620 835 4865 5 chr3D.!!$R2 4030
3 TraesCS3B01G531400 chr1A 532264589 532265178 589 False 719.00 719 89.00200 96 673 1 chr1A.!!$F2 577
4 TraesCS3B01G531400 chr7D 228021019 228021599 580 False 691.00 691 88.48800 104 673 1 chr7D.!!$F3 569
5 TraesCS3B01G531400 chr7D 562103873 562104461 588 False 665.00 665 87.47900 98 673 1 chr7D.!!$F4 575
6 TraesCS3B01G531400 chr7D 22392575 22393166 591 True 638.00 638 86.53200 96 673 1 chr7D.!!$R2 577
7 TraesCS3B01G531400 chr7D 22343271 22343863 592 True 604.00 604 85.52200 96 673 1 chr7D.!!$R1 577
8 TraesCS3B01G531400 chrUn 141694339 141694864 525 True 619.00 619 88.06800 151 673 1 chrUn.!!$R1 522
9 TraesCS3B01G531400 chr2B 45548184 45548774 590 True 619.00 619 85.98000 96 673 1 chr2B.!!$R1 577
10 TraesCS3B01G531400 chr4A 728004003 728004593 590 True 606.00 606 85.52200 93 673 1 chr4A.!!$R3 580
11 TraesCS3B01G531400 chr4B 192754224 192754814 590 False 597.00 597 85.35400 96 673 1 chr4B.!!$F2 577
12 TraesCS3B01G531400 chr1B 94227393 94228042 649 True 287.00 287 75.50700 2972 3646 1 chr1B.!!$R1 674

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
680 700 0.030908 GCCGTCGGACCTAAGATCAG 59.969 60.0 17.49 0.00 0.00 2.90 F
1416 1479 0.247736 AACTGATGCACTCGAGGTCC 59.752 55.0 18.41 4.85 0.00 4.46 F
1830 1991 0.615331 TCATGTCCTTCCTGCTGGTC 59.385 55.0 9.73 0.00 34.23 4.02 F
3112 5353 0.677842 GTCCCGACACAACCTGTACT 59.322 55.0 0.00 0.00 31.03 2.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2642 4571 0.249911 AACTGGAGAACACGGCACTC 60.250 55.000 0.00 0.0 0.00 3.51 R
3404 5649 1.272490 TCTGTCAACAGTTAGGCTCCG 59.728 52.381 9.82 0.0 44.12 4.63 R
3715 5969 1.227674 GGACTGGCCGATCACATCC 60.228 63.158 8.23 0.0 0.00 3.51 R
4434 6708 0.103208 ACGCTATGGCTACTGCTCAC 59.897 55.000 0.00 0.0 39.59 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
190 201 5.990668 ACAGTCCTTATTGTCCTAATGGTC 58.009 41.667 0.00 0.00 34.23 4.02
237 248 7.749126 GCTAAACACGTTTACTGCTAATCAATT 59.251 33.333 0.00 0.00 34.23 2.32
244 255 8.784043 ACGTTTACTGCTAATCAATTCTTTCTT 58.216 29.630 0.00 0.00 0.00 2.52
265 277 1.202769 CCCCGACCCCTTCCTTACAA 61.203 60.000 0.00 0.00 0.00 2.41
326 341 2.675583 GATCCCCTTCCTTACGTACCT 58.324 52.381 0.00 0.00 0.00 3.08
339 354 3.931285 ACGTACCTTTTCACACGAAAC 57.069 42.857 0.00 0.00 40.84 2.78
384 400 3.196254 GTGTGATCCCCTTCCTTACGTAA 59.804 47.826 7.94 7.94 0.00 3.18
391 407 3.256558 CCCTTCCTTACGTAACCTTTCG 58.743 50.000 3.29 0.00 0.00 3.46
399 415 1.932511 ACGTAACCTTTCGCACGAAAA 59.067 42.857 17.80 2.04 42.61 2.29
407 423 3.486875 CCTTTCGCACGAAAAGAAACTGT 60.487 43.478 17.80 0.00 42.61 3.55
414 430 3.006940 ACGAAAAGAAACTGTCACAGCA 58.993 40.909 4.13 0.00 34.37 4.41
543 560 0.107703 CTCTACCCATCGCCTTTGCA 60.108 55.000 0.00 0.00 37.32 4.08
619 639 1.811679 GTCTAGACCGCTTGGCTGC 60.812 63.158 12.13 0.00 35.53 5.25
673 693 3.214123 CCATCGCCGTCGGACCTA 61.214 66.667 17.49 0.00 36.13 3.08
674 694 2.777972 CCATCGCCGTCGGACCTAA 61.778 63.158 17.49 0.00 36.13 2.69
675 695 1.299165 CATCGCCGTCGGACCTAAG 60.299 63.158 17.49 0.00 36.13 2.18
676 696 1.452651 ATCGCCGTCGGACCTAAGA 60.453 57.895 17.49 4.05 36.13 2.10
677 697 0.822532 ATCGCCGTCGGACCTAAGAT 60.823 55.000 17.49 6.25 36.13 2.40
678 698 1.008767 CGCCGTCGGACCTAAGATC 60.009 63.158 17.49 0.00 0.00 2.75
679 699 1.721664 CGCCGTCGGACCTAAGATCA 61.722 60.000 17.49 0.00 0.00 2.92
680 700 0.030908 GCCGTCGGACCTAAGATCAG 59.969 60.000 17.49 0.00 0.00 2.90
681 701 0.669077 CCGTCGGACCTAAGATCAGG 59.331 60.000 4.91 0.00 41.87 3.86
696 716 9.720769 CCTAAGATCAGGTACTTTTCTAAACAA 57.279 33.333 0.00 0.00 34.60 2.83
704 724 9.463443 CAGGTACTTTTCTAAACAAAAATCAGG 57.537 33.333 0.00 0.00 34.60 3.86
705 725 9.197306 AGGTACTTTTCTAAACAAAAATCAGGT 57.803 29.630 0.00 0.00 27.25 4.00
735 755 9.590451 TCTTTAAATCGGATTAAGATTACACGT 57.410 29.630 10.47 0.00 37.34 4.49
736 756 9.632969 CTTTAAATCGGATTAAGATTACACGTG 57.367 33.333 15.48 15.48 37.34 4.49
737 757 5.652744 AATCGGATTAAGATTACACGTGC 57.347 39.130 17.22 0.00 36.64 5.34
738 758 3.110358 TCGGATTAAGATTACACGTGCG 58.890 45.455 17.22 6.46 0.00 5.34
739 759 2.855963 CGGATTAAGATTACACGTGCGT 59.144 45.455 17.22 0.80 0.00 5.24
740 760 3.305094 CGGATTAAGATTACACGTGCGTT 59.695 43.478 17.22 4.64 0.00 4.84
741 761 4.574759 GGATTAAGATTACACGTGCGTTG 58.425 43.478 17.22 0.00 0.00 4.10
742 762 3.443054 TTAAGATTACACGTGCGTTGC 57.557 42.857 17.22 1.46 0.00 4.17
743 763 1.222300 AAGATTACACGTGCGTTGCA 58.778 45.000 17.22 0.00 35.60 4.08
744 764 1.438651 AGATTACACGTGCGTTGCAT 58.561 45.000 17.22 0.00 41.91 3.96
754 774 4.463597 CGTTGCATGAGCGCATTT 57.536 50.000 11.47 0.00 46.23 2.32
755 775 3.602310 CGTTGCATGAGCGCATTTA 57.398 47.368 11.47 0.00 46.23 1.40
756 776 1.893759 CGTTGCATGAGCGCATTTAA 58.106 45.000 11.47 0.00 46.23 1.52
757 777 1.578915 CGTTGCATGAGCGCATTTAAC 59.421 47.619 11.47 8.18 46.23 2.01
758 778 2.594321 GTTGCATGAGCGCATTTAACA 58.406 42.857 11.47 0.00 46.23 2.41
759 779 2.985809 GTTGCATGAGCGCATTTAACAA 59.014 40.909 11.47 3.75 46.23 2.83
760 780 2.594321 TGCATGAGCGCATTTAACAAC 58.406 42.857 11.47 0.00 46.23 3.32
761 781 2.030451 TGCATGAGCGCATTTAACAACA 60.030 40.909 11.47 0.70 46.23 3.33
762 782 2.985809 GCATGAGCGCATTTAACAACAA 59.014 40.909 11.47 0.00 30.68 2.83
763 783 3.059834 GCATGAGCGCATTTAACAACAAG 59.940 43.478 11.47 0.00 30.68 3.16
764 784 2.660490 TGAGCGCATTTAACAACAAGC 58.340 42.857 11.47 0.00 0.00 4.01
765 785 1.643810 GAGCGCATTTAACAACAAGCG 59.356 47.619 11.47 0.00 46.99 4.68
766 786 0.707822 GCGCATTTAACAACAAGCGG 59.292 50.000 0.30 0.00 44.71 5.52
767 787 0.707822 CGCATTTAACAACAAGCGGC 59.292 50.000 0.00 0.00 41.30 6.53
768 788 1.777101 GCATTTAACAACAAGCGGCA 58.223 45.000 1.45 0.00 0.00 5.69
769 789 1.720852 GCATTTAACAACAAGCGGCAG 59.279 47.619 1.45 0.00 0.00 4.85
770 790 1.720852 CATTTAACAACAAGCGGCAGC 59.279 47.619 0.00 0.00 45.58 5.25
827 847 2.737376 GTGTCGCCGAACAGGACC 60.737 66.667 0.00 0.00 45.00 4.46
866 887 4.673298 CCAGGCGGCACACGTACA 62.673 66.667 13.08 0.00 46.52 2.90
880 901 1.512734 GTACACCGCCTACGTGTCG 60.513 63.158 0.00 0.00 35.88 4.35
916 937 2.899838 GGCACGTGTCACCAGCAA 60.900 61.111 16.80 0.00 0.00 3.91
918 939 3.022287 CACGTGTCACCAGCAACC 58.978 61.111 7.58 0.00 0.00 3.77
921 942 3.660111 GTGTCACCAGCAACCCGC 61.660 66.667 0.00 0.00 42.91 6.13
950 984 1.006220 CTACGACCAGCACAGCACA 60.006 57.895 0.00 0.00 0.00 4.57
951 985 1.006220 TACGACCAGCACAGCACAG 60.006 57.895 0.00 0.00 0.00 3.66
953 987 2.592574 GACCAGCACAGCACAGCA 60.593 61.111 0.00 0.00 0.00 4.41
955 989 3.667282 CCAGCACAGCACAGCACC 61.667 66.667 0.00 0.00 0.00 5.01
956 990 4.021631 CAGCACAGCACAGCACCG 62.022 66.667 0.00 0.00 0.00 4.94
993 1028 3.082055 GTCCGTTCCCCTCCTCCC 61.082 72.222 0.00 0.00 0.00 4.30
995 1030 2.764547 CCGTTCCCCTCCTCCCTC 60.765 72.222 0.00 0.00 0.00 4.30
996 1031 2.364961 CGTTCCCCTCCTCCCTCT 59.635 66.667 0.00 0.00 0.00 3.69
997 1032 1.758906 CGTTCCCCTCCTCCCTCTC 60.759 68.421 0.00 0.00 0.00 3.20
998 1033 1.383386 GTTCCCCTCCTCCCTCTCC 60.383 68.421 0.00 0.00 0.00 3.71
999 1034 2.647949 TTCCCCTCCTCCCTCTCCC 61.648 68.421 0.00 0.00 0.00 4.30
1000 1035 3.368501 CCCCTCCTCCCTCTCCCA 61.369 72.222 0.00 0.00 0.00 4.37
1001 1036 2.731461 CCCCTCCTCCCTCTCCCAT 61.731 68.421 0.00 0.00 0.00 4.00
1002 1037 1.461075 CCCTCCTCCCTCTCCCATG 60.461 68.421 0.00 0.00 0.00 3.66
1003 1038 1.461075 CCTCCTCCCTCTCCCATGG 60.461 68.421 4.14 4.14 0.00 3.66
1416 1479 0.247736 AACTGATGCACTCGAGGTCC 59.752 55.000 18.41 4.85 0.00 4.46
1431 1494 6.832384 ACTCGAGGTCCTAGAAATGTTATGTA 59.168 38.462 18.41 0.00 0.00 2.29
1448 1511 8.220755 TGTTATGTAATCTAGGGAAAATGTGC 57.779 34.615 0.00 0.00 0.00 4.57
1451 1514 5.575157 TGTAATCTAGGGAAAATGTGCCAA 58.425 37.500 0.00 0.00 41.19 4.52
1455 1518 6.625532 ATCTAGGGAAAATGTGCCAAAAAT 57.374 33.333 0.00 0.00 41.19 1.82
1487 1587 8.940952 GGATGCAGTATTAGAGAATGGATTAAC 58.059 37.037 0.00 0.00 0.00 2.01
1488 1588 8.854614 ATGCAGTATTAGAGAATGGATTAACC 57.145 34.615 0.00 0.00 39.54 2.85
1510 1610 5.163311 ACCGTCATGTGAAATCCATCTATCA 60.163 40.000 0.00 0.00 0.00 2.15
1512 1612 5.107182 CGTCATGTGAAATCCATCTATCAGC 60.107 44.000 0.00 0.00 0.00 4.26
1559 1660 5.061179 GTGTCAGTACCACCAATTTGTACT 58.939 41.667 0.00 0.00 44.41 2.73
1576 1677 5.473796 TGTACTTGGTCGTTCTTGAAAAC 57.526 39.130 0.00 0.00 0.00 2.43
1578 1679 5.587043 TGTACTTGGTCGTTCTTGAAAACAT 59.413 36.000 0.00 0.00 0.00 2.71
1582 1683 4.452825 TGGTCGTTCTTGAAAACATGGTA 58.547 39.130 0.00 0.00 0.00 3.25
1583 1684 4.513692 TGGTCGTTCTTGAAAACATGGTAG 59.486 41.667 0.00 0.00 0.00 3.18
1623 1783 3.255642 GTGTGTAAGCCCATCAATGTTGT 59.744 43.478 0.00 0.00 0.00 3.32
1678 1838 5.005779 CCGTCTGTTTGTCTACTTGATATGC 59.994 44.000 0.00 0.00 0.00 3.14
1684 1844 8.978874 TGTTTGTCTACTTGATATGCCATAAT 57.021 30.769 0.00 0.00 0.00 1.28
1740 1901 4.755266 AGAATACTAAACCCGCACAGAT 57.245 40.909 0.00 0.00 0.00 2.90
1824 1985 3.760151 TGCTGATTTTCATGTCCTTCCTG 59.240 43.478 0.00 0.00 0.00 3.86
1830 1991 0.615331 TCATGTCCTTCCTGCTGGTC 59.385 55.000 9.73 0.00 34.23 4.02
1851 2012 1.535462 GCGACCGCTAATGCCATTATT 59.465 47.619 7.19 0.00 38.26 1.40
1878 2039 1.745653 GTTCTTATGTCCTTGGCAGCC 59.254 52.381 3.66 3.66 0.00 4.85
1902 2063 1.272704 GGAGGATTCCTGGCCTTGTTT 60.273 52.381 10.74 0.00 40.58 2.83
1959 2120 7.239271 CAGTATCAATTGCCATATTCGTCATC 58.761 38.462 0.00 0.00 0.00 2.92
1962 2123 5.614308 TCAATTGCCATATTCGTCATCTCT 58.386 37.500 0.00 0.00 0.00 3.10
2115 2278 3.951563 TGCAACTTCTAGGGGCATAAT 57.048 42.857 0.00 0.00 0.00 1.28
2246 2452 3.795688 ACTGGTGATGTTCTCAACCAT 57.204 42.857 0.00 0.00 41.21 3.55
2348 2554 0.751643 AACTTTGCGGCTGGACTGTT 60.752 50.000 0.00 0.00 0.00 3.16
2401 2608 1.001248 AATCCAGCTTGCATGGCCT 59.999 52.632 3.32 0.00 37.76 5.19
2448 2655 2.079925 CTCTTGCCTTAGTGTCCAAGC 58.920 52.381 0.00 0.00 35.76 4.01
2473 2680 7.087639 CCATTTGCATTGAAATTGCATTTCTT 58.912 30.769 16.99 7.16 46.71 2.52
2526 2733 7.828508 AAGCAATTCATGATAGCAGGATTTA 57.171 32.000 14.46 0.00 34.43 1.40
2669 4899 3.056749 CCGTGTTCTCCAGTTACTAGCTT 60.057 47.826 0.00 0.00 0.00 3.74
2694 4924 2.749076 TGCACATGTGATGCTCCTTTAC 59.251 45.455 29.80 7.34 43.77 2.01
2697 4927 4.256110 CACATGTGATGCTCCTTTACTCA 58.744 43.478 21.64 0.00 0.00 3.41
2702 4932 6.500684 TGTGATGCTCCTTTACTCATTTTC 57.499 37.500 0.00 0.00 0.00 2.29
2774 5004 8.647143 AAGAATGTTACAATGTTGACCAAAAG 57.353 30.769 0.00 0.00 0.00 2.27
2783 5013 5.904362 ATGTTGACCAAAAGAATAGCTCC 57.096 39.130 0.00 0.00 0.00 4.70
2797 5027 5.302059 AGAATAGCTCCGTTCATACTTGCTA 59.698 40.000 0.00 0.00 36.26 3.49
2816 5046 8.282256 ACTTGCTAATGATTATTAACTTCCCCT 58.718 33.333 0.00 0.00 0.00 4.79
2934 5164 3.715834 CAAAGGAGGGAAGGAGATGAGAT 59.284 47.826 0.00 0.00 0.00 2.75
2988 5218 9.881529 TTACCATGAAGACAAATAAAACGTAAC 57.118 29.630 0.00 0.00 0.00 2.50
3049 5288 3.143728 TCATCAGATGCGATTTGATGGG 58.856 45.455 19.74 5.77 45.12 4.00
3063 5302 6.459573 CGATTTGATGGGTGGTTATGGTAAAG 60.460 42.308 0.00 0.00 0.00 1.85
3112 5353 0.677842 GTCCCGACACAACCTGTACT 59.322 55.000 0.00 0.00 31.03 2.73
3165 5406 2.203337 GCAGCCGGATTATGCCCA 60.203 61.111 5.05 0.00 33.81 5.36
3166 5407 1.604593 GCAGCCGGATTATGCCCAT 60.605 57.895 5.05 0.00 33.81 4.00
3181 5422 3.295973 TGCCCATTTTATACTCTTGCCC 58.704 45.455 0.00 0.00 0.00 5.36
3221 5462 1.701847 AGGGACTCTGTTCTTGCATGT 59.298 47.619 0.00 0.00 0.00 3.21
3306 5548 6.238759 GGACTCATTGGCATTAACCTGTATTC 60.239 42.308 0.00 0.00 0.00 1.75
3409 5654 8.590470 GTTAGTTAACTTATGTACTTTCGGAGC 58.410 37.037 14.49 0.00 33.52 4.70
3534 5788 4.999950 GGGGTATCATGTAGAAGCATCTTG 59.000 45.833 0.00 0.00 37.10 3.02
3679 5933 4.521062 GCAGAGATGCGGTCGGCT 62.521 66.667 3.87 0.00 44.05 5.52
3680 5934 2.584418 CAGAGATGCGGTCGGCTG 60.584 66.667 3.87 0.00 44.05 4.85
3726 5980 0.758734 TAAGGCAGGGATGTGATCGG 59.241 55.000 0.00 0.00 0.00 4.18
3775 6029 9.520204 CGAATTATTGTTCCTTTATTGATGCTT 57.480 29.630 0.00 0.00 0.00 3.91
4034 6288 2.883828 CGGAGTGTGGGGCAGAAGT 61.884 63.158 0.00 0.00 0.00 3.01
4038 6292 1.136329 AGTGTGGGGCAGAAGTCCAT 61.136 55.000 0.00 0.00 43.06 3.41
4075 6329 2.095718 GCAGCAAGTGGTTTAGCTACAC 60.096 50.000 1.15 1.15 35.19 2.90
4076 6330 3.138304 CAGCAAGTGGTTTAGCTACACA 58.862 45.455 11.94 0.08 37.58 3.72
4136 6390 4.638421 GCCCTGCTGTTGTTGTGTTATATA 59.362 41.667 0.00 0.00 0.00 0.86
4160 6414 0.300789 GCCTAAAGCGTGTCGTATGC 59.699 55.000 0.00 0.00 41.79 3.14
4180 6434 0.520404 GAGTCACCGCTTGTCGAGTA 59.480 55.000 0.00 0.00 41.67 2.59
4181 6435 1.132643 GAGTCACCGCTTGTCGAGTAT 59.867 52.381 0.00 0.00 41.67 2.12
4182 6436 1.135373 AGTCACCGCTTGTCGAGTATG 60.135 52.381 0.00 0.00 41.67 2.39
4227 6481 3.149196 TCCGTGTATAGTTATCCCGGTC 58.851 50.000 0.00 0.00 35.59 4.79
4243 6497 3.436180 CCCGGTCTAGTGTAAGGTATCCT 60.436 52.174 0.00 0.00 33.87 3.24
4265 6521 0.673644 CGTCCCTGAACTTTCGGCAT 60.674 55.000 0.00 0.00 32.15 4.40
4282 6541 1.328680 GCATCCTGTGTTGTATGCTCG 59.671 52.381 0.00 0.00 41.16 5.03
4332 6600 2.746277 GCGGGCTAGGTTGTGGTG 60.746 66.667 0.00 0.00 0.00 4.17
4382 6653 3.181462 TGGCTATGTTGAGGCATAGAGTG 60.181 47.826 14.91 0.00 46.81 3.51
4388 6659 7.442364 GCTATGTTGAGGCATAGAGTGATAAAA 59.558 37.037 14.91 0.00 46.81 1.52
4452 6726 0.387202 AGTGAGCAGTAGCCATAGCG 59.613 55.000 0.00 0.00 46.67 4.26
4456 6730 0.249073 AGCAGTAGCCATAGCGTTCG 60.249 55.000 0.00 0.00 46.67 3.95
4457 6731 1.822250 GCAGTAGCCATAGCGTTCGC 61.822 60.000 9.24 9.24 46.67 4.70
4458 6732 1.067582 AGTAGCCATAGCGTTCGCC 59.932 57.895 13.54 0.00 46.67 5.54
4462 6736 2.280186 CCATAGCGTTCGCCCCTC 60.280 66.667 13.54 0.00 0.00 4.30
4477 6751 2.671177 CCTCGCCGCTTTGTCACTG 61.671 63.158 0.00 0.00 0.00 3.66
4480 6754 2.671177 CGCCGCTTTGTCACTGGAG 61.671 63.158 0.00 0.00 0.00 3.86
4482 6756 1.166531 GCCGCTTTGTCACTGGAGTT 61.167 55.000 0.00 0.00 0.00 3.01
4483 6757 0.588252 CCGCTTTGTCACTGGAGTTG 59.412 55.000 0.00 0.00 0.00 3.16
4484 6758 1.299541 CGCTTTGTCACTGGAGTTGT 58.700 50.000 0.00 0.00 0.00 3.32
4485 6759 1.670811 CGCTTTGTCACTGGAGTTGTT 59.329 47.619 0.00 0.00 0.00 2.83
4486 6760 2.286418 CGCTTTGTCACTGGAGTTGTTC 60.286 50.000 0.00 0.00 0.00 3.18
4487 6761 2.033424 GCTTTGTCACTGGAGTTGTTCC 59.967 50.000 0.00 0.00 46.98 3.62
4499 6773 3.306502 GGAGTTGTTCCATACAGTCGGAA 60.307 47.826 0.95 0.95 46.01 4.30
4527 6801 7.762588 ACAGATGTATATACACAGGTAGACC 57.237 40.000 17.69 0.00 39.30 3.85
4528 6802 6.720288 ACAGATGTATATACACAGGTAGACCC 59.280 42.308 17.69 0.00 39.30 4.46
4531 6805 5.768752 TGTATATACACAGGTAGACCCACA 58.231 41.667 11.62 0.00 36.42 4.17
4533 6807 1.933021 TACACAGGTAGACCCACAGG 58.067 55.000 0.00 0.00 36.42 4.00
4547 6826 1.556911 CCACAGGTCTATCAGCAAGGT 59.443 52.381 0.00 0.00 0.00 3.50
4561 6840 0.182537 CAAGGTGGTCTTGGTGGTGA 59.817 55.000 0.00 0.00 46.81 4.02
4563 6842 0.399949 AGGTGGTCTTGGTGGTGAGA 60.400 55.000 0.00 0.00 0.00 3.27
4564 6843 0.693049 GGTGGTCTTGGTGGTGAGAT 59.307 55.000 0.00 0.00 0.00 2.75
4566 6845 0.608130 TGGTCTTGGTGGTGAGATCG 59.392 55.000 0.00 0.00 0.00 3.69
4567 6846 0.608640 GGTCTTGGTGGTGAGATCGT 59.391 55.000 0.00 0.00 0.00 3.73
4568 6847 1.673033 GGTCTTGGTGGTGAGATCGTG 60.673 57.143 0.00 0.00 0.00 4.35
4605 6920 1.040339 CGAGGGAGAGGAGGAAGGTG 61.040 65.000 0.00 0.00 0.00 4.00
4836 7151 1.600636 CAGCAGCCCCAACTCGAAA 60.601 57.895 0.00 0.00 0.00 3.46
4866 7181 3.288308 CTCGCTCTTCACGGCCTGT 62.288 63.158 0.00 0.00 0.00 4.00
4874 7189 3.594775 CACGGCCTGTGCAAGCAA 61.595 61.111 13.44 0.00 42.70 3.91
4875 7190 2.598394 ACGGCCTGTGCAAGCAAT 60.598 55.556 0.00 0.00 40.13 3.56
4876 7191 1.303236 ACGGCCTGTGCAAGCAATA 60.303 52.632 0.00 0.00 40.13 1.90
4877 7192 1.308069 ACGGCCTGTGCAAGCAATAG 61.308 55.000 0.00 0.00 40.13 1.73
4878 7193 1.026182 CGGCCTGTGCAAGCAATAGA 61.026 55.000 0.00 0.00 40.13 1.98
4879 7194 1.396653 GGCCTGTGCAAGCAATAGAT 58.603 50.000 0.00 0.00 40.13 1.98
4880 7195 1.066605 GGCCTGTGCAAGCAATAGATG 59.933 52.381 0.00 0.00 40.13 2.90
4881 7196 2.019249 GCCTGTGCAAGCAATAGATGA 58.981 47.619 0.00 0.00 37.47 2.92
4882 7197 2.621998 GCCTGTGCAAGCAATAGATGAT 59.378 45.455 0.00 0.00 37.47 2.45
4883 7198 3.550233 GCCTGTGCAAGCAATAGATGATG 60.550 47.826 0.00 0.00 37.47 3.07
4884 7199 3.550233 CCTGTGCAAGCAATAGATGATGC 60.550 47.826 0.00 0.00 41.27 3.91
4885 7200 2.359848 TGTGCAAGCAATAGATGATGCC 59.640 45.455 0.00 0.00 43.57 4.40
4886 7201 1.958579 TGCAAGCAATAGATGATGCCC 59.041 47.619 0.00 0.00 43.57 5.36
4887 7202 2.236766 GCAAGCAATAGATGATGCCCT 58.763 47.619 0.00 0.00 43.57 5.19
4888 7203 2.626743 GCAAGCAATAGATGATGCCCTT 59.373 45.455 0.00 0.00 43.57 3.95
4889 7204 3.069158 GCAAGCAATAGATGATGCCCTTT 59.931 43.478 0.00 0.00 43.57 3.11
4890 7205 4.442472 GCAAGCAATAGATGATGCCCTTTT 60.442 41.667 0.00 0.00 43.57 2.27
4891 7206 5.667466 CAAGCAATAGATGATGCCCTTTTT 58.333 37.500 0.00 0.00 43.57 1.94
4892 7207 6.683610 GCAAGCAATAGATGATGCCCTTTTTA 60.684 38.462 0.00 0.00 43.57 1.52
4893 7208 7.439381 CAAGCAATAGATGATGCCCTTTTTAT 58.561 34.615 0.00 0.00 43.57 1.40
4894 7209 7.607615 AGCAATAGATGATGCCCTTTTTATT 57.392 32.000 0.00 0.00 43.57 1.40
4895 7210 8.710749 AGCAATAGATGATGCCCTTTTTATTA 57.289 30.769 0.00 0.00 43.57 0.98
4896 7211 8.579863 AGCAATAGATGATGCCCTTTTTATTAC 58.420 33.333 0.00 0.00 43.57 1.89
4897 7212 8.579863 GCAATAGATGATGCCCTTTTTATTACT 58.420 33.333 0.00 0.00 36.56 2.24
4899 7214 8.870075 ATAGATGATGCCCTTTTTATTACTCC 57.130 34.615 0.00 0.00 0.00 3.85
4900 7215 6.071320 AGATGATGCCCTTTTTATTACTCCC 58.929 40.000 0.00 0.00 0.00 4.30
4901 7216 5.466127 TGATGCCCTTTTTATTACTCCCT 57.534 39.130 0.00 0.00 0.00 4.20
4902 7217 5.445964 TGATGCCCTTTTTATTACTCCCTC 58.554 41.667 0.00 0.00 0.00 4.30
4903 7218 4.245251 TGCCCTTTTTATTACTCCCTCC 57.755 45.455 0.00 0.00 0.00 4.30
4904 7219 3.211865 GCCCTTTTTATTACTCCCTCCG 58.788 50.000 0.00 0.00 0.00 4.63
4905 7220 3.118149 GCCCTTTTTATTACTCCCTCCGA 60.118 47.826 0.00 0.00 0.00 4.55
4906 7221 4.445879 GCCCTTTTTATTACTCCCTCCGAT 60.446 45.833 0.00 0.00 0.00 4.18
4907 7222 5.691896 CCCTTTTTATTACTCCCTCCGATT 58.308 41.667 0.00 0.00 0.00 3.34
4908 7223 5.763698 CCCTTTTTATTACTCCCTCCGATTC 59.236 44.000 0.00 0.00 0.00 2.52
4909 7224 6.354130 CCTTTTTATTACTCCCTCCGATTCA 58.646 40.000 0.00 0.00 0.00 2.57
4910 7225 6.826741 CCTTTTTATTACTCCCTCCGATTCAA 59.173 38.462 0.00 0.00 0.00 2.69
4911 7226 7.338449 CCTTTTTATTACTCCCTCCGATTCAAA 59.662 37.037 0.00 0.00 0.00 2.69
4912 7227 8.638629 TTTTTATTACTCCCTCCGATTCAAAA 57.361 30.769 0.00 0.00 0.00 2.44
4913 7228 8.817092 TTTTATTACTCCCTCCGATTCAAAAT 57.183 30.769 0.00 0.00 0.00 1.82
4914 7229 9.908747 TTTTATTACTCCCTCCGATTCAAAATA 57.091 29.630 0.00 0.00 0.00 1.40
4915 7230 9.908747 TTTATTACTCCCTCCGATTCAAAATAA 57.091 29.630 0.00 0.00 0.00 1.40
4916 7231 9.555727 TTATTACTCCCTCCGATTCAAAATAAG 57.444 33.333 0.00 0.00 0.00 1.73
4917 7232 5.437191 ACTCCCTCCGATTCAAAATAAGT 57.563 39.130 0.00 0.00 0.00 2.24
4918 7233 5.186198 ACTCCCTCCGATTCAAAATAAGTG 58.814 41.667 0.00 0.00 0.00 3.16
4919 7234 5.174037 TCCCTCCGATTCAAAATAAGTGT 57.826 39.130 0.00 0.00 0.00 3.55
4920 7235 5.183228 TCCCTCCGATTCAAAATAAGTGTC 58.817 41.667 0.00 0.00 0.00 3.67
4921 7236 4.034048 CCCTCCGATTCAAAATAAGTGTCG 59.966 45.833 0.00 0.00 0.00 4.35
4922 7237 4.494199 CCTCCGATTCAAAATAAGTGTCGC 60.494 45.833 0.00 0.00 0.00 5.19
4923 7238 3.997681 TCCGATTCAAAATAAGTGTCGCA 59.002 39.130 0.00 0.00 0.00 5.10
4924 7239 4.092821 TCCGATTCAAAATAAGTGTCGCAG 59.907 41.667 0.00 0.00 0.00 5.18
4925 7240 4.142902 CCGATTCAAAATAAGTGTCGCAGT 60.143 41.667 0.00 0.00 0.00 4.40
4926 7241 5.015733 CGATTCAAAATAAGTGTCGCAGTC 58.984 41.667 0.00 0.00 0.00 3.51
4927 7242 5.163953 CGATTCAAAATAAGTGTCGCAGTCT 60.164 40.000 0.00 0.00 0.00 3.24
4928 7243 5.591643 TTCAAAATAAGTGTCGCAGTCTC 57.408 39.130 0.00 0.00 0.00 3.36
4929 7244 4.627058 TCAAAATAAGTGTCGCAGTCTCA 58.373 39.130 0.00 0.00 0.00 3.27
4930 7245 5.053811 TCAAAATAAGTGTCGCAGTCTCAA 58.946 37.500 0.00 0.00 0.00 3.02
4931 7246 5.525745 TCAAAATAAGTGTCGCAGTCTCAAA 59.474 36.000 0.00 0.00 0.00 2.69
4932 7247 6.204688 TCAAAATAAGTGTCGCAGTCTCAAAT 59.795 34.615 0.00 0.00 0.00 2.32
4933 7248 5.786401 AATAAGTGTCGCAGTCTCAAATC 57.214 39.130 0.00 0.00 0.00 2.17
4934 7249 1.702886 AGTGTCGCAGTCTCAAATCG 58.297 50.000 0.00 0.00 0.00 3.34
4935 7250 0.716108 GTGTCGCAGTCTCAAATCGG 59.284 55.000 0.00 0.00 0.00 4.18
4936 7251 0.317160 TGTCGCAGTCTCAAATCGGT 59.683 50.000 0.00 0.00 0.00 4.69
4937 7252 1.270094 TGTCGCAGTCTCAAATCGGTT 60.270 47.619 0.00 0.00 0.00 4.44
4938 7253 1.126846 GTCGCAGTCTCAAATCGGTTG 59.873 52.381 0.00 0.00 38.71 3.77
4939 7254 0.443869 CGCAGTCTCAAATCGGTTGG 59.556 55.000 0.00 0.00 37.85 3.77
4940 7255 1.808411 GCAGTCTCAAATCGGTTGGA 58.192 50.000 0.00 0.00 37.85 3.53
4941 7256 2.151202 GCAGTCTCAAATCGGTTGGAA 58.849 47.619 0.00 0.00 37.85 3.53
4942 7257 2.095718 GCAGTCTCAAATCGGTTGGAAC 60.096 50.000 0.00 0.00 37.85 3.62
4943 7258 2.484264 CAGTCTCAAATCGGTTGGAACC 59.516 50.000 0.00 0.00 45.76 3.62
4951 7266 2.281276 GGTTGGAACCGGAGCGTT 60.281 61.111 9.46 0.00 39.66 4.84
4952 7267 1.004679 GGTTGGAACCGGAGCGTTA 60.005 57.895 9.46 0.00 39.66 3.18
4953 7268 1.293963 GGTTGGAACCGGAGCGTTAC 61.294 60.000 9.46 0.00 39.66 2.50
4954 7269 0.320160 GTTGGAACCGGAGCGTTACT 60.320 55.000 9.46 0.00 0.00 2.24
4955 7270 0.393820 TTGGAACCGGAGCGTTACTT 59.606 50.000 9.46 0.00 0.00 2.24
4956 7271 0.393820 TGGAACCGGAGCGTTACTTT 59.606 50.000 9.46 0.00 0.00 2.66
4957 7272 1.073964 GGAACCGGAGCGTTACTTTC 58.926 55.000 9.46 0.00 0.00 2.62
4958 7273 1.337541 GGAACCGGAGCGTTACTTTCT 60.338 52.381 9.46 0.00 0.00 2.52
4959 7274 2.094545 GGAACCGGAGCGTTACTTTCTA 60.095 50.000 9.46 0.00 0.00 2.10
4960 7275 2.935481 ACCGGAGCGTTACTTTCTAG 57.065 50.000 9.46 0.00 0.00 2.43
4961 7276 1.475682 ACCGGAGCGTTACTTTCTAGG 59.524 52.381 9.46 0.00 0.00 3.02
4962 7277 1.557651 CGGAGCGTTACTTTCTAGGC 58.442 55.000 0.00 0.00 0.00 3.93
4963 7278 1.801765 CGGAGCGTTACTTTCTAGGCC 60.802 57.143 0.00 0.00 0.00 5.19
4964 7279 1.481363 GGAGCGTTACTTTCTAGGCCT 59.519 52.381 11.78 11.78 0.00 5.19
4965 7280 2.541556 GAGCGTTACTTTCTAGGCCTG 58.458 52.381 17.99 5.60 0.00 4.85
4966 7281 2.165845 GAGCGTTACTTTCTAGGCCTGA 59.834 50.000 17.99 8.27 0.00 3.86
4967 7282 2.766828 AGCGTTACTTTCTAGGCCTGAT 59.233 45.455 17.99 0.00 0.00 2.90
4968 7283 3.197983 AGCGTTACTTTCTAGGCCTGATT 59.802 43.478 17.99 0.00 0.00 2.57
4969 7284 3.309954 GCGTTACTTTCTAGGCCTGATTG 59.690 47.826 17.99 9.02 0.00 2.67
4970 7285 4.504858 CGTTACTTTCTAGGCCTGATTGT 58.495 43.478 17.99 13.77 0.00 2.71
4971 7286 5.657474 CGTTACTTTCTAGGCCTGATTGTA 58.343 41.667 17.99 12.89 0.00 2.41
4972 7287 5.519206 CGTTACTTTCTAGGCCTGATTGTAC 59.481 44.000 17.99 3.18 0.00 2.90
4973 7288 4.124851 ACTTTCTAGGCCTGATTGTACG 57.875 45.455 17.99 0.00 0.00 3.67
4974 7289 3.514309 ACTTTCTAGGCCTGATTGTACGT 59.486 43.478 17.99 0.00 0.00 3.57
4975 7290 3.520290 TTCTAGGCCTGATTGTACGTG 57.480 47.619 17.99 0.00 0.00 4.49
4976 7291 1.754803 TCTAGGCCTGATTGTACGTGG 59.245 52.381 17.99 0.00 0.00 4.94
4977 7292 1.754803 CTAGGCCTGATTGTACGTGGA 59.245 52.381 17.99 0.00 0.00 4.02
4978 7293 0.981183 AGGCCTGATTGTACGTGGAA 59.019 50.000 3.11 0.00 0.00 3.53
4979 7294 1.349688 AGGCCTGATTGTACGTGGAAA 59.650 47.619 3.11 0.00 0.00 3.13
4980 7295 2.156098 GGCCTGATTGTACGTGGAAAA 58.844 47.619 0.00 0.00 0.00 2.29
4981 7296 2.752903 GGCCTGATTGTACGTGGAAAAT 59.247 45.455 0.00 0.00 0.00 1.82
4982 7297 3.427503 GGCCTGATTGTACGTGGAAAATG 60.428 47.826 0.00 0.00 0.00 2.32
4983 7298 3.438781 GCCTGATTGTACGTGGAAAATGA 59.561 43.478 0.00 0.00 0.00 2.57
4984 7299 4.083003 GCCTGATTGTACGTGGAAAATGAA 60.083 41.667 0.00 0.00 0.00 2.57
4985 7300 5.631026 CCTGATTGTACGTGGAAAATGAAG 58.369 41.667 0.00 0.00 0.00 3.02
4986 7301 5.391950 CCTGATTGTACGTGGAAAATGAAGG 60.392 44.000 0.00 0.00 0.00 3.46
4987 7302 5.309638 TGATTGTACGTGGAAAATGAAGGA 58.690 37.500 0.00 0.00 0.00 3.36
4988 7303 5.765677 TGATTGTACGTGGAAAATGAAGGAA 59.234 36.000 0.00 0.00 0.00 3.36
4989 7304 5.682943 TTGTACGTGGAAAATGAAGGAAG 57.317 39.130 0.00 0.00 0.00 3.46
4990 7305 3.500680 TGTACGTGGAAAATGAAGGAAGC 59.499 43.478 0.00 0.00 0.00 3.86
4991 7306 2.863809 ACGTGGAAAATGAAGGAAGCT 58.136 42.857 0.00 0.00 0.00 3.74
4992 7307 2.554032 ACGTGGAAAATGAAGGAAGCTG 59.446 45.455 0.00 0.00 0.00 4.24
4993 7308 2.095059 CGTGGAAAATGAAGGAAGCTGG 60.095 50.000 0.00 0.00 0.00 4.85
4994 7309 3.157087 GTGGAAAATGAAGGAAGCTGGA 58.843 45.455 0.00 0.00 0.00 3.86
4995 7310 3.573967 GTGGAAAATGAAGGAAGCTGGAA 59.426 43.478 0.00 0.00 0.00 3.53
4996 7311 3.828451 TGGAAAATGAAGGAAGCTGGAAG 59.172 43.478 0.00 0.00 0.00 3.46
4997 7312 4.082125 GGAAAATGAAGGAAGCTGGAAGA 58.918 43.478 0.00 0.00 34.07 2.87
4998 7313 4.708909 GGAAAATGAAGGAAGCTGGAAGAT 59.291 41.667 0.00 0.00 34.07 2.40
4999 7314 5.393896 GGAAAATGAAGGAAGCTGGAAGATG 60.394 44.000 0.00 0.00 34.07 2.90
5000 7315 4.313020 AATGAAGGAAGCTGGAAGATGT 57.687 40.909 0.00 0.00 34.07 3.06
5001 7316 5.441718 AATGAAGGAAGCTGGAAGATGTA 57.558 39.130 0.00 0.00 34.07 2.29
5002 7317 4.478206 TGAAGGAAGCTGGAAGATGTAG 57.522 45.455 0.00 0.00 34.07 2.74
5003 7318 3.198635 TGAAGGAAGCTGGAAGATGTAGG 59.801 47.826 0.00 0.00 34.07 3.18
5004 7319 2.122768 AGGAAGCTGGAAGATGTAGGG 58.877 52.381 0.00 0.00 34.07 3.53
5005 7320 1.141858 GGAAGCTGGAAGATGTAGGGG 59.858 57.143 0.00 0.00 34.07 4.79
5006 7321 1.141858 GAAGCTGGAAGATGTAGGGGG 59.858 57.143 0.00 0.00 34.07 5.40
5007 7322 1.149401 GCTGGAAGATGTAGGGGGC 59.851 63.158 0.00 0.00 34.07 5.80
5008 7323 1.348775 GCTGGAAGATGTAGGGGGCT 61.349 60.000 0.00 0.00 34.07 5.19
5009 7324 0.471617 CTGGAAGATGTAGGGGGCTG 59.528 60.000 0.00 0.00 34.07 4.85
5010 7325 0.988145 TGGAAGATGTAGGGGGCTGG 60.988 60.000 0.00 0.00 0.00 4.85
5011 7326 0.694444 GGAAGATGTAGGGGGCTGGA 60.694 60.000 0.00 0.00 0.00 3.86
5012 7327 0.761802 GAAGATGTAGGGGGCTGGAG 59.238 60.000 0.00 0.00 0.00 3.86
5013 7328 0.343372 AAGATGTAGGGGGCTGGAGA 59.657 55.000 0.00 0.00 0.00 3.71
5014 7329 0.343372 AGATGTAGGGGGCTGGAGAA 59.657 55.000 0.00 0.00 0.00 2.87
5015 7330 1.213296 GATGTAGGGGGCTGGAGAAA 58.787 55.000 0.00 0.00 0.00 2.52
5016 7331 1.564348 GATGTAGGGGGCTGGAGAAAA 59.436 52.381 0.00 0.00 0.00 2.29
5017 7332 0.991920 TGTAGGGGGCTGGAGAAAAG 59.008 55.000 0.00 0.00 0.00 2.27
5018 7333 1.286248 GTAGGGGGCTGGAGAAAAGA 58.714 55.000 0.00 0.00 0.00 2.52
5019 7334 1.633945 GTAGGGGGCTGGAGAAAAGAA 59.366 52.381 0.00 0.00 0.00 2.52
5020 7335 0.701147 AGGGGGCTGGAGAAAAGAAG 59.299 55.000 0.00 0.00 0.00 2.85
5021 7336 0.967887 GGGGGCTGGAGAAAAGAAGC 60.968 60.000 0.00 0.00 34.86 3.86
5022 7337 0.251341 GGGGCTGGAGAAAAGAAGCA 60.251 55.000 0.00 0.00 37.40 3.91
5023 7338 1.618074 GGGGCTGGAGAAAAGAAGCAT 60.618 52.381 0.00 0.00 37.40 3.79
5024 7339 2.174360 GGGCTGGAGAAAAGAAGCATT 58.826 47.619 0.00 0.00 37.40 3.56
5025 7340 3.356290 GGGCTGGAGAAAAGAAGCATTA 58.644 45.455 0.00 0.00 37.40 1.90
5026 7341 3.129462 GGGCTGGAGAAAAGAAGCATTAC 59.871 47.826 0.00 0.00 37.40 1.89
5027 7342 3.129462 GGCTGGAGAAAAGAAGCATTACC 59.871 47.826 0.00 0.00 37.40 2.85
5028 7343 4.013050 GCTGGAGAAAAGAAGCATTACCT 58.987 43.478 0.00 0.00 35.69 3.08
5029 7344 4.460731 GCTGGAGAAAAGAAGCATTACCTT 59.539 41.667 0.00 0.00 35.69 3.50
5030 7345 5.047731 GCTGGAGAAAAGAAGCATTACCTTT 60.048 40.000 0.00 0.00 35.69 3.11
5031 7346 6.517362 GCTGGAGAAAAGAAGCATTACCTTTT 60.517 38.462 0.00 0.00 41.25 2.27
5037 7352 8.076714 GAAAAGAAGCATTACCTTTTCCAAAG 57.923 34.615 13.01 0.00 44.67 2.77
5038 7353 6.976934 AAGAAGCATTACCTTTTCCAAAGA 57.023 33.333 0.00 0.00 0.00 2.52
5039 7354 6.581171 AGAAGCATTACCTTTTCCAAAGAG 57.419 37.500 0.00 0.00 0.00 2.85
5040 7355 4.790765 AGCATTACCTTTTCCAAAGAGC 57.209 40.909 0.00 0.00 0.00 4.09
5041 7356 3.191371 AGCATTACCTTTTCCAAAGAGCG 59.809 43.478 0.00 0.00 0.00 5.03
5042 7357 3.501950 CATTACCTTTTCCAAAGAGCGC 58.498 45.455 0.00 0.00 0.00 5.92
5043 7358 1.153353 TACCTTTTCCAAAGAGCGCG 58.847 50.000 0.00 0.00 0.00 6.86
5044 7359 1.442688 CCTTTTCCAAAGAGCGCGC 60.443 57.895 26.66 26.66 0.00 6.86
5045 7360 1.793613 CTTTTCCAAAGAGCGCGCG 60.794 57.895 28.44 28.44 0.00 6.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
190 201 3.547468 GCGCTAAACATATTTGGTTGCTG 59.453 43.478 0.00 0.00 33.83 4.41
237 248 0.475048 AGGGGTCGGGGAAAGAAAGA 60.475 55.000 0.00 0.00 0.00 2.52
244 255 0.911045 GTAAGGAAGGGGTCGGGGAA 60.911 60.000 0.00 0.00 0.00 3.97
326 341 3.181508 GGGAGTTTCGTTTCGTGTGAAAA 60.182 43.478 0.00 0.00 45.22 2.29
339 354 1.566018 GGTTCGCTGTGGGAGTTTCG 61.566 60.000 0.00 0.00 0.00 3.46
384 400 2.681344 AGTTTCTTTTCGTGCGAAAGGT 59.319 40.909 22.08 6.63 43.75 3.50
391 407 3.354397 CTGTGACAGTTTCTTTTCGTGC 58.646 45.455 4.01 0.00 0.00 5.34
399 415 1.670811 CGGTTTGCTGTGACAGTTTCT 59.329 47.619 14.82 0.00 33.43 2.52
407 423 4.196778 TGGGGCGGTTTGCTGTGA 62.197 61.111 0.00 0.00 45.43 3.58
473 490 2.765250 GAAGCTGTTGCGGGTCGAGA 62.765 60.000 0.00 0.00 45.42 4.04
602 620 2.579201 GCAGCCAAGCGGTCTAGA 59.421 61.111 0.00 0.00 33.28 2.43
678 698 9.463443 CCTGATTTTTGTTTAGAAAAGTACCTG 57.537 33.333 0.00 0.00 30.36 4.00
679 699 9.197306 ACCTGATTTTTGTTTAGAAAAGTACCT 57.803 29.630 0.00 0.00 30.36 3.08
709 729 9.590451 ACGTGTAATCTTAATCCGATTTAAAGA 57.410 29.630 8.23 8.23 33.47 2.52
710 730 9.632969 CACGTGTAATCTTAATCCGATTTAAAG 57.367 33.333 7.58 0.00 33.47 1.85
711 731 8.117988 GCACGTGTAATCTTAATCCGATTTAAA 58.882 33.333 18.38 0.00 33.47 1.52
712 732 7.515528 CGCACGTGTAATCTTAATCCGATTTAA 60.516 37.037 18.38 0.00 33.47 1.52
713 733 6.074729 CGCACGTGTAATCTTAATCCGATTTA 60.075 38.462 18.38 0.00 33.47 1.40
714 734 5.276678 CGCACGTGTAATCTTAATCCGATTT 60.277 40.000 18.38 0.00 33.47 2.17
715 735 4.208460 CGCACGTGTAATCTTAATCCGATT 59.792 41.667 18.38 0.00 35.45 3.34
716 736 3.734231 CGCACGTGTAATCTTAATCCGAT 59.266 43.478 18.38 0.00 0.00 4.18
717 737 3.110358 CGCACGTGTAATCTTAATCCGA 58.890 45.455 18.38 0.00 0.00 4.55
718 738 2.855963 ACGCACGTGTAATCTTAATCCG 59.144 45.455 18.38 9.66 0.00 4.18
719 739 4.574759 CAACGCACGTGTAATCTTAATCC 58.425 43.478 18.38 0.00 0.00 3.01
720 740 4.019867 GCAACGCACGTGTAATCTTAATC 58.980 43.478 18.38 0.00 0.00 1.75
721 741 3.433957 TGCAACGCACGTGTAATCTTAAT 59.566 39.130 18.38 0.00 31.71 1.40
722 742 2.801111 TGCAACGCACGTGTAATCTTAA 59.199 40.909 18.38 0.00 31.71 1.85
723 743 2.405172 TGCAACGCACGTGTAATCTTA 58.595 42.857 18.38 0.00 31.71 2.10
724 744 1.222300 TGCAACGCACGTGTAATCTT 58.778 45.000 18.38 0.00 31.71 2.40
725 745 1.128507 CATGCAACGCACGTGTAATCT 59.871 47.619 18.38 0.00 43.04 2.40
726 746 1.127766 TCATGCAACGCACGTGTAATC 59.872 47.619 18.38 0.00 43.04 1.75
727 747 1.128507 CTCATGCAACGCACGTGTAAT 59.871 47.619 18.38 0.00 43.04 1.89
728 748 0.510790 CTCATGCAACGCACGTGTAA 59.489 50.000 18.38 0.00 43.04 2.41
729 749 1.896339 GCTCATGCAACGCACGTGTA 61.896 55.000 18.38 0.00 43.04 2.90
730 750 2.938253 CTCATGCAACGCACGTGT 59.062 55.556 18.38 0.00 43.04 4.49
731 751 2.500369 GCTCATGCAACGCACGTG 60.500 61.111 12.28 12.28 43.04 4.49
732 752 4.075910 CGCTCATGCAACGCACGT 62.076 61.111 0.00 0.00 43.04 4.49
741 761 2.594321 TGTTGTTAAATGCGCTCATGC 58.406 42.857 9.73 0.00 32.23 4.06
742 762 3.059834 GCTTGTTGTTAAATGCGCTCATG 59.940 43.478 9.73 0.00 32.23 3.07
743 763 3.244976 GCTTGTTGTTAAATGCGCTCAT 58.755 40.909 9.73 0.00 33.53 2.90
744 764 2.660490 GCTTGTTGTTAAATGCGCTCA 58.340 42.857 9.73 0.00 0.00 4.26
745 765 1.643810 CGCTTGTTGTTAAATGCGCTC 59.356 47.619 9.73 0.00 37.13 5.03
746 766 1.665735 CCGCTTGTTGTTAAATGCGCT 60.666 47.619 9.73 0.00 41.71 5.92
747 767 0.707822 CCGCTTGTTGTTAAATGCGC 59.292 50.000 0.00 0.00 41.71 6.09
748 768 0.707822 GCCGCTTGTTGTTAAATGCG 59.292 50.000 0.00 0.00 42.52 4.73
749 769 1.720852 CTGCCGCTTGTTGTTAAATGC 59.279 47.619 0.00 0.00 0.00 3.56
750 770 1.720852 GCTGCCGCTTGTTGTTAAATG 59.279 47.619 0.00 0.00 0.00 2.32
751 771 1.339610 TGCTGCCGCTTGTTGTTAAAT 59.660 42.857 0.70 0.00 36.97 1.40
752 772 0.741326 TGCTGCCGCTTGTTGTTAAA 59.259 45.000 0.70 0.00 36.97 1.52
753 773 0.310543 CTGCTGCCGCTTGTTGTTAA 59.689 50.000 0.70 0.00 36.97 2.01
754 774 1.948508 CTGCTGCCGCTTGTTGTTA 59.051 52.632 0.70 0.00 36.97 2.41
755 775 2.723746 CTGCTGCCGCTTGTTGTT 59.276 55.556 0.70 0.00 36.97 2.83
756 776 3.969802 GCTGCTGCCGCTTGTTGT 61.970 61.111 8.89 0.00 36.97 3.32
759 779 4.680237 TACGCTGCTGCCGCTTGT 62.680 61.111 14.02 7.96 36.97 3.16
760 780 3.857854 CTACGCTGCTGCCGCTTG 61.858 66.667 14.02 2.22 36.97 4.01
767 787 3.181967 GTCGGTGCTACGCTGCTG 61.182 66.667 0.00 0.00 0.00 4.41
768 788 4.778415 CGTCGGTGCTACGCTGCT 62.778 66.667 0.00 0.00 33.04 4.24
774 794 4.712425 ACGTGGCGTCGGTGCTAC 62.712 66.667 6.29 6.29 42.28 3.58
775 795 4.710695 CACGTGGCGTCGGTGCTA 62.711 66.667 7.95 0.00 38.32 3.49
816 836 2.738521 CACTGCGGTCCTGTTCGG 60.739 66.667 0.00 0.00 0.00 4.30
820 840 2.910479 TCGTCACTGCGGTCCTGT 60.910 61.111 0.00 0.00 0.00 4.00
892 913 3.947841 TGACACGTGCCGCTTTGC 61.948 61.111 17.22 0.00 0.00 3.68
899 920 2.899838 TTGCTGGTGACACGTGCC 60.900 61.111 17.22 9.75 35.60 5.01
900 921 2.327940 GTTGCTGGTGACACGTGC 59.672 61.111 17.22 9.30 35.60 5.34
916 937 0.252197 GTAGTGGATTGAAGGCGGGT 59.748 55.000 0.00 0.00 0.00 5.28
918 939 0.174845 TCGTAGTGGATTGAAGGCGG 59.825 55.000 0.00 0.00 0.00 6.13
921 942 2.893637 CTGGTCGTAGTGGATTGAAGG 58.106 52.381 0.00 0.00 0.00 3.46
967 1002 4.754667 GGAACGGACAGGCGGGTC 62.755 72.222 4.08 4.08 37.06 4.46
975 1010 2.284405 GGAGGAGGGGAACGGACA 60.284 66.667 0.00 0.00 0.00 4.02
976 1011 3.082055 GGGAGGAGGGGAACGGAC 61.082 72.222 0.00 0.00 0.00 4.79
987 1022 1.314867 GTCCATGGGAGAGGGAGGA 59.685 63.158 13.02 0.00 34.34 3.71
993 1028 0.396417 AGAGGTCGTCCATGGGAGAG 60.396 60.000 13.02 1.02 35.89 3.20
995 1030 1.729470 CGAGAGGTCGTCCATGGGAG 61.729 65.000 13.02 6.46 41.57 4.30
996 1031 1.753078 CGAGAGGTCGTCCATGGGA 60.753 63.158 13.02 0.00 41.57 4.37
997 1032 2.808315 CGAGAGGTCGTCCATGGG 59.192 66.667 13.02 0.00 41.57 4.00
998 1033 3.432051 GGCGAGAGGTCGTCCATGG 62.432 68.421 4.97 4.97 45.44 3.66
999 1034 2.105128 GGCGAGAGGTCGTCCATG 59.895 66.667 0.51 0.00 45.44 3.66
1317 1379 1.893062 CAGGCTCACCGAGATGACA 59.107 57.895 0.00 0.00 42.76 3.58
1350 1413 2.017049 CGGATCGGAAAAGGAAAGCAT 58.983 47.619 0.00 0.00 0.00 3.79
1405 1468 4.457834 AACATTTCTAGGACCTCGAGTG 57.542 45.455 12.31 5.52 0.00 3.51
1431 1494 6.432403 TTTTTGGCACATTTTCCCTAGATT 57.568 33.333 0.00 0.00 39.30 2.40
1444 1507 3.314635 GCATCCAACAAATTTTTGGCACA 59.685 39.130 19.22 9.27 42.96 4.57
1445 1508 3.314635 TGCATCCAACAAATTTTTGGCAC 59.685 39.130 19.22 13.87 42.96 5.01
1448 1511 7.437793 AATACTGCATCCAACAAATTTTTGG 57.562 32.000 18.49 18.49 44.39 3.28
1451 1514 9.023962 TCTCTAATACTGCATCCAACAAATTTT 57.976 29.630 0.00 0.00 0.00 1.82
1455 1518 7.067372 CCATTCTCTAATACTGCATCCAACAAA 59.933 37.037 0.00 0.00 0.00 2.83
1487 1587 5.299949 TGATAGATGGATTTCACATGACGG 58.700 41.667 0.00 0.00 0.00 4.79
1488 1588 5.107182 GCTGATAGATGGATTTCACATGACG 60.107 44.000 0.00 0.00 0.00 4.35
1510 1610 6.430308 AGATTGATGAATTTCATATGAGCGCT 59.570 34.615 11.27 11.27 37.20 5.92
1512 1612 7.534239 CACAGATTGATGAATTTCATATGAGCG 59.466 37.037 11.79 3.49 37.20 5.03
1559 1660 3.697045 ACCATGTTTTCAAGAACGACCAA 59.303 39.130 0.00 0.00 32.18 3.67
1562 1663 5.917541 TCTACCATGTTTTCAAGAACGAC 57.082 39.130 0.00 0.00 32.18 4.34
1593 1753 2.112190 TGGGCTTACACACCATATCGA 58.888 47.619 0.00 0.00 0.00 3.59
1595 1755 4.085357 TGATGGGCTTACACACCATATC 57.915 45.455 0.00 0.00 44.62 1.63
1648 1808 7.833786 TCAAGTAGACAAACAGACGGTATATT 58.166 34.615 0.00 0.00 0.00 1.28
1678 1838 4.019792 TCCAACATCGATGGGATTATGG 57.980 45.455 28.09 22.28 38.67 2.74
1684 1844 5.503634 AATATGATCCAACATCGATGGGA 57.496 39.130 28.09 24.30 38.54 4.37
1725 1886 7.352739 GTGATTAATTATCTGTGCGGGTTTAG 58.647 38.462 0.00 0.00 34.17 1.85
1740 1901 7.094162 TGCAACGGATGAAAAGGTGATTAATTA 60.094 33.333 0.00 0.00 0.00 1.40
1851 2012 4.518970 GCCAAGGACATAAGAACTGAAACA 59.481 41.667 0.00 0.00 0.00 2.83
1878 2039 2.203126 GCCAGGAATCCTCCAGCG 60.203 66.667 0.00 0.00 45.24 5.18
1902 2063 1.066286 ACTGCAACCAAGCAAGCAAAA 60.066 42.857 0.00 0.00 45.13 2.44
1914 2075 1.359848 CTCCGACATACACTGCAACC 58.640 55.000 0.00 0.00 0.00 3.77
1959 2120 2.093816 TGCAGAGATAACAGTGGCAGAG 60.094 50.000 0.00 0.00 0.00 3.35
1962 2123 2.857186 TTGCAGAGATAACAGTGGCA 57.143 45.000 0.00 0.00 0.00 4.92
2246 2452 5.507817 GCTCATTGGTTTTGTGATGACAAGA 60.508 40.000 0.00 0.00 43.03 3.02
2348 2554 4.202357 ACACAGGCAGAAGTATGAACAGAA 60.202 41.667 0.00 0.00 0.00 3.02
2416 2623 2.743553 AGGCAAGAGCATAGGCAATTT 58.256 42.857 0.67 0.00 44.61 1.82
2617 4546 9.554395 TCAAGAACACAACAGTCTGAATTAATA 57.446 29.630 6.91 0.00 0.00 0.98
2642 4571 0.249911 AACTGGAGAACACGGCACTC 60.250 55.000 0.00 0.00 0.00 3.51
2669 4899 1.814394 GGAGCATCACATGTGCAAGAA 59.186 47.619 21.38 3.61 44.87 2.52
2694 4924 5.801176 GCATCATATGTTGCGAAAATGAG 57.199 39.130 19.99 0.00 32.04 2.90
2774 5004 4.372656 AGCAAGTATGAACGGAGCTATTC 58.627 43.478 0.00 0.00 32.59 1.75
2797 5027 9.755122 GCCTATTAGGGGAAGTTAATAATCATT 57.245 33.333 11.72 0.00 35.37 2.57
2934 5164 4.019858 CACTCCTCTACATCTCTCCACAA 58.980 47.826 0.00 0.00 0.00 3.33
3013 5243 5.295431 TCTGATGAATGGCTGTAAAAACG 57.705 39.130 0.00 0.00 0.00 3.60
3049 5288 8.570068 TGGAAATAACTCTTTACCATAACCAC 57.430 34.615 0.00 0.00 0.00 4.16
3161 5402 2.293399 CGGGCAAGAGTATAAAATGGGC 59.707 50.000 0.00 0.00 0.00 5.36
3165 5406 7.404671 AAATTCACGGGCAAGAGTATAAAAT 57.595 32.000 0.00 0.00 0.00 1.82
3166 5407 6.827586 AAATTCACGGGCAAGAGTATAAAA 57.172 33.333 0.00 0.00 0.00 1.52
3181 5422 5.874810 TCCCTGTTTCTGATCTAAATTCACG 59.125 40.000 0.00 0.00 0.00 4.35
3221 5462 5.876357 ACCAGTACTAAATTGGAGAGCAAA 58.124 37.500 5.17 0.00 35.89 3.68
3306 5548 6.461110 AATCCAGTTCATCTTAATTGCAGG 57.539 37.500 0.00 0.00 0.00 4.85
3404 5649 1.272490 TCTGTCAACAGTTAGGCTCCG 59.728 52.381 9.82 0.00 44.12 4.63
3409 5654 3.244215 TGCTTCCTCTGTCAACAGTTAGG 60.244 47.826 9.82 10.09 44.12 2.69
3534 5788 2.418334 CCCTACGTTTCAAGGACTAGCC 60.418 54.545 3.56 0.00 34.58 3.93
3679 5933 4.764050 ACAATATATTCCACACGGACCA 57.236 40.909 0.00 0.00 42.67 4.02
3680 5934 6.285990 ACTAACAATATATTCCACACGGACC 58.714 40.000 0.00 0.00 42.67 4.46
3701 5955 4.919774 TCACATCCCTGCCTTAAAACTA 57.080 40.909 0.00 0.00 0.00 2.24
3715 5969 1.227674 GGACTGGCCGATCACATCC 60.228 63.158 8.23 0.00 0.00 3.51
3726 5980 4.639135 GAACATATTCCAAAGGACTGGC 57.361 45.455 0.00 0.00 36.32 4.85
3833 6087 2.756829 TCGGACGTGAAAGTTGCATTA 58.243 42.857 0.00 0.00 0.00 1.90
4034 6288 5.475220 GCTGCTATCTTAGTCAGTCTATGGA 59.525 44.000 0.00 0.00 34.56 3.41
4038 6292 5.888724 ACTTGCTGCTATCTTAGTCAGTCTA 59.111 40.000 0.00 0.00 34.56 2.59
4048 6302 3.691609 GCTAAACCACTTGCTGCTATCTT 59.308 43.478 0.00 0.00 0.00 2.40
4075 6329 1.633171 GCGATAACAGACAGCGCTG 59.367 57.895 34.89 34.89 43.85 5.18
4076 6330 1.874019 CGCGATAACAGACAGCGCT 60.874 57.895 2.64 2.64 44.91 5.92
4136 6390 1.361668 CGACACGCTTTAGGCAGCAT 61.362 55.000 0.00 0.00 40.09 3.79
4160 6414 1.797933 CTCGACAAGCGGTGACTCG 60.798 63.158 0.00 0.00 41.33 4.18
4163 6417 1.269166 CATACTCGACAAGCGGTGAC 58.731 55.000 0.00 0.00 41.33 3.67
4172 6426 7.254692 CCTCTACTCGAAATAACATACTCGACA 60.255 40.741 0.00 0.00 35.52 4.35
4180 6434 7.348080 TCATGTCCTCTACTCGAAATAACAT 57.652 36.000 0.00 0.00 0.00 2.71
4181 6435 6.769134 TCATGTCCTCTACTCGAAATAACA 57.231 37.500 0.00 0.00 0.00 2.41
4182 6436 7.382759 GGATTCATGTCCTCTACTCGAAATAAC 59.617 40.741 0.00 0.00 35.32 1.89
4227 6481 2.877168 ACGCGAGGATACCTTACACTAG 59.123 50.000 15.93 0.00 31.76 2.57
4243 6497 1.372499 CGAAAGTTCAGGGACGCGA 60.372 57.895 15.93 0.00 0.00 5.87
4265 6521 2.823747 ACTACGAGCATACAACACAGGA 59.176 45.455 0.00 0.00 0.00 3.86
4332 6600 2.884639 ACACCTCCATTTACAGCACAAC 59.115 45.455 0.00 0.00 0.00 3.32
4400 6674 7.424803 TGTTACCACTGAAATGAAATTGACAG 58.575 34.615 0.00 0.00 42.81 3.51
4434 6708 0.103208 ACGCTATGGCTACTGCTCAC 59.897 55.000 0.00 0.00 39.59 3.51
4457 6731 4.697756 TGACAAAGCGGCGAGGGG 62.698 66.667 12.98 0.00 0.00 4.79
4458 6732 3.423154 GTGACAAAGCGGCGAGGG 61.423 66.667 12.98 0.00 0.00 4.30
4462 6736 2.664851 TCCAGTGACAAAGCGGCG 60.665 61.111 0.51 0.51 0.00 6.46
4465 6739 1.299541 ACAACTCCAGTGACAAAGCG 58.700 50.000 0.00 0.00 0.00 4.68
4466 6740 2.033424 GGAACAACTCCAGTGACAAAGC 59.967 50.000 0.00 0.00 44.67 3.51
4483 6757 4.312443 TGTTTCTTCCGACTGTATGGAAC 58.688 43.478 9.28 3.10 39.29 3.62
4484 6758 4.282449 TCTGTTTCTTCCGACTGTATGGAA 59.718 41.667 11.99 11.99 41.83 3.53
4485 6759 3.830178 TCTGTTTCTTCCGACTGTATGGA 59.170 43.478 0.00 0.00 0.00 3.41
4486 6760 4.188247 TCTGTTTCTTCCGACTGTATGG 57.812 45.455 0.00 0.00 0.00 2.74
4487 6761 5.171476 ACATCTGTTTCTTCCGACTGTATG 58.829 41.667 0.00 0.00 0.00 2.39
4488 6762 5.407407 ACATCTGTTTCTTCCGACTGTAT 57.593 39.130 0.00 0.00 0.00 2.29
4489 6763 4.866508 ACATCTGTTTCTTCCGACTGTA 57.133 40.909 0.00 0.00 0.00 2.74
4490 6764 3.753294 ACATCTGTTTCTTCCGACTGT 57.247 42.857 0.00 0.00 0.00 3.55
4491 6765 8.135529 TGTATATACATCTGTTTCTTCCGACTG 58.864 37.037 11.62 0.00 0.00 3.51
4492 6766 8.136165 GTGTATATACATCTGTTTCTTCCGACT 58.864 37.037 18.27 0.00 38.63 4.18
4493 6767 7.919091 TGTGTATATACATCTGTTTCTTCCGAC 59.081 37.037 18.27 1.18 38.63 4.79
4494 6768 8.002984 TGTGTATATACATCTGTTTCTTCCGA 57.997 34.615 18.27 0.00 38.63 4.55
4495 6769 7.382488 CCTGTGTATATACATCTGTTTCTTCCG 59.618 40.741 18.27 0.00 38.63 4.30
4496 6770 8.204836 ACCTGTGTATATACATCTGTTTCTTCC 58.795 37.037 18.27 2.36 38.63 3.46
4499 6773 9.642343 TCTACCTGTGTATATACATCTGTTTCT 57.358 33.333 18.27 0.38 38.63 2.52
4527 6801 1.556911 ACCTTGCTGATAGACCTGTGG 59.443 52.381 0.00 0.00 0.00 4.17
4528 6802 2.625737 CACCTTGCTGATAGACCTGTG 58.374 52.381 0.00 0.00 0.00 3.66
4531 6805 1.834263 GACCACCTTGCTGATAGACCT 59.166 52.381 0.00 0.00 0.00 3.85
4533 6807 3.265791 CAAGACCACCTTGCTGATAGAC 58.734 50.000 0.00 0.00 44.90 2.59
4534 6808 3.616956 CAAGACCACCTTGCTGATAGA 57.383 47.619 0.00 0.00 44.90 1.98
4547 6826 0.608130 CGATCTCACCACCAAGACCA 59.392 55.000 0.00 0.00 0.00 4.02
4556 6835 0.172578 CCGCTAACACGATCTCACCA 59.827 55.000 0.00 0.00 34.06 4.17
4561 6840 1.226603 GCGACCGCTAACACGATCT 60.227 57.895 7.19 0.00 38.26 2.75
4563 6842 2.578713 CGCGACCGCTAACACGAT 60.579 61.111 12.69 0.00 39.32 3.73
4564 6843 4.764336 CCGCGACCGCTAACACGA 62.764 66.667 8.23 0.00 39.32 4.35
4836 7151 4.719106 AGCGAGACGTCGGGGACT 62.719 66.667 10.46 1.88 46.91 3.85
4866 7181 1.958579 GGGCATCATCTATTGCTTGCA 59.041 47.619 0.00 0.00 38.88 4.08
4867 7182 2.236766 AGGGCATCATCTATTGCTTGC 58.763 47.619 0.00 0.00 38.88 4.01
4868 7183 4.931661 AAAGGGCATCATCTATTGCTTG 57.068 40.909 0.00 0.00 38.88 4.01
4869 7184 5.945144 AAAAAGGGCATCATCTATTGCTT 57.055 34.783 0.00 0.00 38.88 3.91
4870 7185 7.607615 AATAAAAAGGGCATCATCTATTGCT 57.392 32.000 0.00 0.00 38.88 3.91
4871 7186 8.579863 AGTAATAAAAAGGGCATCATCTATTGC 58.420 33.333 0.00 0.00 38.14 3.56
4873 7188 9.301897 GGAGTAATAAAAAGGGCATCATCTATT 57.698 33.333 0.00 0.00 0.00 1.73
4874 7189 7.890655 GGGAGTAATAAAAAGGGCATCATCTAT 59.109 37.037 0.00 0.00 0.00 1.98
4875 7190 7.073725 AGGGAGTAATAAAAAGGGCATCATCTA 59.926 37.037 0.00 0.00 0.00 1.98
4876 7191 6.071320 GGGAGTAATAAAAAGGGCATCATCT 58.929 40.000 0.00 0.00 0.00 2.90
4877 7192 6.071320 AGGGAGTAATAAAAAGGGCATCATC 58.929 40.000 0.00 0.00 0.00 2.92
4878 7193 6.030727 AGGGAGTAATAAAAAGGGCATCAT 57.969 37.500 0.00 0.00 0.00 2.45
4879 7194 5.445964 GAGGGAGTAATAAAAAGGGCATCA 58.554 41.667 0.00 0.00 0.00 3.07
4880 7195 4.827835 GGAGGGAGTAATAAAAAGGGCATC 59.172 45.833 0.00 0.00 0.00 3.91
4881 7196 4.688874 CGGAGGGAGTAATAAAAAGGGCAT 60.689 45.833 0.00 0.00 0.00 4.40
4882 7197 3.371166 CGGAGGGAGTAATAAAAAGGGCA 60.371 47.826 0.00 0.00 0.00 5.36
4883 7198 3.118149 TCGGAGGGAGTAATAAAAAGGGC 60.118 47.826 0.00 0.00 0.00 5.19
4884 7199 4.765813 TCGGAGGGAGTAATAAAAAGGG 57.234 45.455 0.00 0.00 0.00 3.95
4885 7200 6.354130 TGAATCGGAGGGAGTAATAAAAAGG 58.646 40.000 0.00 0.00 0.00 3.11
4886 7201 7.859325 TTGAATCGGAGGGAGTAATAAAAAG 57.141 36.000 0.00 0.00 0.00 2.27
4887 7202 8.638629 TTTTGAATCGGAGGGAGTAATAAAAA 57.361 30.769 0.00 0.00 0.00 1.94
4888 7203 8.817092 ATTTTGAATCGGAGGGAGTAATAAAA 57.183 30.769 0.00 0.00 0.00 1.52
4889 7204 9.908747 TTATTTTGAATCGGAGGGAGTAATAAA 57.091 29.630 0.00 0.00 0.00 1.40
4890 7205 9.555727 CTTATTTTGAATCGGAGGGAGTAATAA 57.444 33.333 0.00 0.00 0.00 1.40
4891 7206 8.711170 ACTTATTTTGAATCGGAGGGAGTAATA 58.289 33.333 0.00 0.00 0.00 0.98
4892 7207 7.499232 CACTTATTTTGAATCGGAGGGAGTAAT 59.501 37.037 0.00 0.00 0.00 1.89
4893 7208 6.821665 CACTTATTTTGAATCGGAGGGAGTAA 59.178 38.462 0.00 0.00 0.00 2.24
4894 7209 6.070424 ACACTTATTTTGAATCGGAGGGAGTA 60.070 38.462 0.00 0.00 0.00 2.59
4895 7210 5.186198 CACTTATTTTGAATCGGAGGGAGT 58.814 41.667 0.00 0.00 0.00 3.85
4896 7211 5.186198 ACACTTATTTTGAATCGGAGGGAG 58.814 41.667 0.00 0.00 0.00 4.30
4897 7212 5.174037 ACACTTATTTTGAATCGGAGGGA 57.826 39.130 0.00 0.00 0.00 4.20
4898 7213 4.034048 CGACACTTATTTTGAATCGGAGGG 59.966 45.833 0.00 0.00 0.00 4.30
4899 7214 4.494199 GCGACACTTATTTTGAATCGGAGG 60.494 45.833 0.00 0.00 0.00 4.30
4900 7215 4.092821 TGCGACACTTATTTTGAATCGGAG 59.907 41.667 0.00 0.00 0.00 4.63
4901 7216 3.997681 TGCGACACTTATTTTGAATCGGA 59.002 39.130 0.00 0.00 0.00 4.55
4902 7217 4.142902 ACTGCGACACTTATTTTGAATCGG 60.143 41.667 0.00 0.00 0.00 4.18
4903 7218 4.957971 ACTGCGACACTTATTTTGAATCG 58.042 39.130 0.00 0.00 0.00 3.34
4904 7219 6.128553 TGAGACTGCGACACTTATTTTGAATC 60.129 38.462 0.00 0.00 0.00 2.52
4905 7220 5.700832 TGAGACTGCGACACTTATTTTGAAT 59.299 36.000 0.00 0.00 0.00 2.57
4906 7221 5.053811 TGAGACTGCGACACTTATTTTGAA 58.946 37.500 0.00 0.00 0.00 2.69
4907 7222 4.627058 TGAGACTGCGACACTTATTTTGA 58.373 39.130 0.00 0.00 0.00 2.69
4908 7223 4.990543 TGAGACTGCGACACTTATTTTG 57.009 40.909 0.00 0.00 0.00 2.44
4909 7224 6.560253 ATTTGAGACTGCGACACTTATTTT 57.440 33.333 0.00 0.00 0.00 1.82
4910 7225 5.163953 CGATTTGAGACTGCGACACTTATTT 60.164 40.000 0.00 0.00 0.00 1.40
4911 7226 4.327357 CGATTTGAGACTGCGACACTTATT 59.673 41.667 0.00 0.00 0.00 1.40
4912 7227 3.859961 CGATTTGAGACTGCGACACTTAT 59.140 43.478 0.00 0.00 0.00 1.73
4913 7228 3.242518 CGATTTGAGACTGCGACACTTA 58.757 45.455 0.00 0.00 0.00 2.24
4914 7229 2.061773 CGATTTGAGACTGCGACACTT 58.938 47.619 0.00 0.00 0.00 3.16
4915 7230 1.670087 CCGATTTGAGACTGCGACACT 60.670 52.381 0.00 0.00 0.00 3.55
4916 7231 0.716108 CCGATTTGAGACTGCGACAC 59.284 55.000 0.00 0.00 0.00 3.67
4917 7232 0.317160 ACCGATTTGAGACTGCGACA 59.683 50.000 0.00 0.00 0.00 4.35
4918 7233 1.126846 CAACCGATTTGAGACTGCGAC 59.873 52.381 0.00 0.00 37.39 5.19
4919 7234 1.428448 CAACCGATTTGAGACTGCGA 58.572 50.000 0.00 0.00 37.39 5.10
4920 7235 0.443869 CCAACCGATTTGAGACTGCG 59.556 55.000 0.00 0.00 37.39 5.18
4921 7236 1.808411 TCCAACCGATTTGAGACTGC 58.192 50.000 0.00 0.00 37.39 4.40
4922 7237 2.484264 GGTTCCAACCGATTTGAGACTG 59.516 50.000 0.00 0.00 39.66 3.51
4923 7238 2.779506 GGTTCCAACCGATTTGAGACT 58.220 47.619 0.00 0.00 39.66 3.24
4934 7249 1.004679 TAACGCTCCGGTTCCAACC 60.005 57.895 0.00 0.00 45.76 3.77
4935 7250 0.320160 AGTAACGCTCCGGTTCCAAC 60.320 55.000 0.00 0.00 0.00 3.77
4936 7251 0.393820 AAGTAACGCTCCGGTTCCAA 59.606 50.000 0.00 0.00 0.00 3.53
4937 7252 0.393820 AAAGTAACGCTCCGGTTCCA 59.606 50.000 0.00 0.00 0.00 3.53
4938 7253 1.073964 GAAAGTAACGCTCCGGTTCC 58.926 55.000 0.00 0.00 0.00 3.62
4939 7254 2.075979 AGAAAGTAACGCTCCGGTTC 57.924 50.000 0.00 0.00 0.00 3.62
4940 7255 2.094338 CCTAGAAAGTAACGCTCCGGTT 60.094 50.000 0.00 0.00 0.00 4.44
4941 7256 1.475682 CCTAGAAAGTAACGCTCCGGT 59.524 52.381 0.00 0.00 0.00 5.28
4942 7257 1.801765 GCCTAGAAAGTAACGCTCCGG 60.802 57.143 0.00 0.00 0.00 5.14
4943 7258 1.557651 GCCTAGAAAGTAACGCTCCG 58.442 55.000 0.00 0.00 0.00 4.63
4944 7259 1.481363 AGGCCTAGAAAGTAACGCTCC 59.519 52.381 1.29 0.00 0.00 4.70
4945 7260 2.165845 TCAGGCCTAGAAAGTAACGCTC 59.834 50.000 3.98 0.00 0.00 5.03
4946 7261 2.176889 TCAGGCCTAGAAAGTAACGCT 58.823 47.619 3.98 0.00 0.00 5.07
4947 7262 2.667473 TCAGGCCTAGAAAGTAACGC 57.333 50.000 3.98 0.00 0.00 4.84
4948 7263 4.504858 ACAATCAGGCCTAGAAAGTAACG 58.495 43.478 3.98 0.00 0.00 3.18
4949 7264 5.519206 CGTACAATCAGGCCTAGAAAGTAAC 59.481 44.000 3.98 0.00 0.00 2.50
4950 7265 5.186409 ACGTACAATCAGGCCTAGAAAGTAA 59.814 40.000 3.98 0.00 0.00 2.24
4951 7266 4.708421 ACGTACAATCAGGCCTAGAAAGTA 59.292 41.667 3.98 9.89 0.00 2.24
4952 7267 3.514309 ACGTACAATCAGGCCTAGAAAGT 59.486 43.478 3.98 10.81 0.00 2.66
4953 7268 3.865745 CACGTACAATCAGGCCTAGAAAG 59.134 47.826 3.98 5.43 0.00 2.62
4954 7269 3.369052 CCACGTACAATCAGGCCTAGAAA 60.369 47.826 3.98 0.00 0.00 2.52
4955 7270 2.167693 CCACGTACAATCAGGCCTAGAA 59.832 50.000 3.98 0.00 0.00 2.10
4956 7271 1.754803 CCACGTACAATCAGGCCTAGA 59.245 52.381 3.98 6.09 0.00 2.43
4957 7272 1.754803 TCCACGTACAATCAGGCCTAG 59.245 52.381 3.98 0.00 0.00 3.02
4958 7273 1.855295 TCCACGTACAATCAGGCCTA 58.145 50.000 3.98 0.00 0.00 3.93
4959 7274 0.981183 TTCCACGTACAATCAGGCCT 59.019 50.000 0.00 0.00 0.00 5.19
4960 7275 1.816074 TTTCCACGTACAATCAGGCC 58.184 50.000 0.00 0.00 0.00 5.19
4961 7276 3.438781 TCATTTTCCACGTACAATCAGGC 59.561 43.478 0.00 0.00 0.00 4.85
4962 7277 5.391950 CCTTCATTTTCCACGTACAATCAGG 60.392 44.000 0.00 0.00 0.00 3.86
4963 7278 5.411361 TCCTTCATTTTCCACGTACAATCAG 59.589 40.000 0.00 0.00 0.00 2.90
4964 7279 5.309638 TCCTTCATTTTCCACGTACAATCA 58.690 37.500 0.00 0.00 0.00 2.57
4965 7280 5.873179 TCCTTCATTTTCCACGTACAATC 57.127 39.130 0.00 0.00 0.00 2.67
4966 7281 5.335661 GCTTCCTTCATTTTCCACGTACAAT 60.336 40.000 0.00 0.00 0.00 2.71
4967 7282 4.023536 GCTTCCTTCATTTTCCACGTACAA 60.024 41.667 0.00 0.00 0.00 2.41
4968 7283 3.500680 GCTTCCTTCATTTTCCACGTACA 59.499 43.478 0.00 0.00 0.00 2.90
4969 7284 3.751698 AGCTTCCTTCATTTTCCACGTAC 59.248 43.478 0.00 0.00 0.00 3.67
4970 7285 3.751175 CAGCTTCCTTCATTTTCCACGTA 59.249 43.478 0.00 0.00 0.00 3.57
4971 7286 2.554032 CAGCTTCCTTCATTTTCCACGT 59.446 45.455 0.00 0.00 0.00 4.49
4972 7287 2.095059 CCAGCTTCCTTCATTTTCCACG 60.095 50.000 0.00 0.00 0.00 4.94
4973 7288 3.157087 TCCAGCTTCCTTCATTTTCCAC 58.843 45.455 0.00 0.00 0.00 4.02
4974 7289 3.524095 TCCAGCTTCCTTCATTTTCCA 57.476 42.857 0.00 0.00 0.00 3.53
4975 7290 4.082125 TCTTCCAGCTTCCTTCATTTTCC 58.918 43.478 0.00 0.00 0.00 3.13
4976 7291 5.184671 ACATCTTCCAGCTTCCTTCATTTTC 59.815 40.000 0.00 0.00 0.00 2.29
4977 7292 5.082425 ACATCTTCCAGCTTCCTTCATTTT 58.918 37.500 0.00 0.00 0.00 1.82
4978 7293 4.670765 ACATCTTCCAGCTTCCTTCATTT 58.329 39.130 0.00 0.00 0.00 2.32
4979 7294 4.313020 ACATCTTCCAGCTTCCTTCATT 57.687 40.909 0.00 0.00 0.00 2.57
4980 7295 4.141528 CCTACATCTTCCAGCTTCCTTCAT 60.142 45.833 0.00 0.00 0.00 2.57
4981 7296 3.198635 CCTACATCTTCCAGCTTCCTTCA 59.801 47.826 0.00 0.00 0.00 3.02
4982 7297 3.432890 CCCTACATCTTCCAGCTTCCTTC 60.433 52.174 0.00 0.00 0.00 3.46
4983 7298 2.507471 CCCTACATCTTCCAGCTTCCTT 59.493 50.000 0.00 0.00 0.00 3.36
4984 7299 2.122768 CCCTACATCTTCCAGCTTCCT 58.877 52.381 0.00 0.00 0.00 3.36
4985 7300 1.141858 CCCCTACATCTTCCAGCTTCC 59.858 57.143 0.00 0.00 0.00 3.46
4986 7301 1.141858 CCCCCTACATCTTCCAGCTTC 59.858 57.143 0.00 0.00 0.00 3.86
4987 7302 1.216990 CCCCCTACATCTTCCAGCTT 58.783 55.000 0.00 0.00 0.00 3.74
4988 7303 1.348775 GCCCCCTACATCTTCCAGCT 61.349 60.000 0.00 0.00 0.00 4.24
4989 7304 1.149401 GCCCCCTACATCTTCCAGC 59.851 63.158 0.00 0.00 0.00 4.85
4990 7305 0.471617 CAGCCCCCTACATCTTCCAG 59.528 60.000 0.00 0.00 0.00 3.86
4991 7306 0.988145 CCAGCCCCCTACATCTTCCA 60.988 60.000 0.00 0.00 0.00 3.53
4992 7307 0.694444 TCCAGCCCCCTACATCTTCC 60.694 60.000 0.00 0.00 0.00 3.46
4993 7308 0.761802 CTCCAGCCCCCTACATCTTC 59.238 60.000 0.00 0.00 0.00 2.87
4994 7309 0.343372 TCTCCAGCCCCCTACATCTT 59.657 55.000 0.00 0.00 0.00 2.40
4995 7310 0.343372 TTCTCCAGCCCCCTACATCT 59.657 55.000 0.00 0.00 0.00 2.90
4996 7311 1.213296 TTTCTCCAGCCCCCTACATC 58.787 55.000 0.00 0.00 0.00 3.06
4997 7312 1.566231 CTTTTCTCCAGCCCCCTACAT 59.434 52.381 0.00 0.00 0.00 2.29
4998 7313 0.991920 CTTTTCTCCAGCCCCCTACA 59.008 55.000 0.00 0.00 0.00 2.74
4999 7314 1.286248 TCTTTTCTCCAGCCCCCTAC 58.714 55.000 0.00 0.00 0.00 3.18
5000 7315 1.916181 CTTCTTTTCTCCAGCCCCCTA 59.084 52.381 0.00 0.00 0.00 3.53
5001 7316 0.701147 CTTCTTTTCTCCAGCCCCCT 59.299 55.000 0.00 0.00 0.00 4.79
5002 7317 0.967887 GCTTCTTTTCTCCAGCCCCC 60.968 60.000 0.00 0.00 0.00 5.40
5003 7318 0.251341 TGCTTCTTTTCTCCAGCCCC 60.251 55.000 0.00 0.00 0.00 5.80
5004 7319 1.844687 ATGCTTCTTTTCTCCAGCCC 58.155 50.000 0.00 0.00 0.00 5.19
5005 7320 3.129462 GGTAATGCTTCTTTTCTCCAGCC 59.871 47.826 0.00 0.00 0.00 4.85
5006 7321 4.013050 AGGTAATGCTTCTTTTCTCCAGC 58.987 43.478 0.00 0.00 0.00 4.85
5007 7322 6.581171 AAAGGTAATGCTTCTTTTCTCCAG 57.419 37.500 0.00 0.00 0.00 3.86
5008 7323 6.976934 AAAAGGTAATGCTTCTTTTCTCCA 57.023 33.333 0.00 0.00 36.37 3.86
5013 7328 7.791029 TCTTTGGAAAAGGTAATGCTTCTTTT 58.209 30.769 0.00 0.00 41.59 2.27
5014 7329 7.360113 TCTTTGGAAAAGGTAATGCTTCTTT 57.640 32.000 0.20 0.00 32.77 2.52
5015 7330 6.517362 GCTCTTTGGAAAAGGTAATGCTTCTT 60.517 38.462 0.20 0.00 0.00 2.52
5016 7331 5.047731 GCTCTTTGGAAAAGGTAATGCTTCT 60.048 40.000 0.20 0.00 0.00 2.85
5017 7332 5.164233 GCTCTTTGGAAAAGGTAATGCTTC 58.836 41.667 0.20 0.00 0.00 3.86
5018 7333 4.321230 CGCTCTTTGGAAAAGGTAATGCTT 60.321 41.667 0.20 0.00 0.00 3.91
5019 7334 3.191371 CGCTCTTTGGAAAAGGTAATGCT 59.809 43.478 0.20 0.00 0.00 3.79
5020 7335 3.501950 CGCTCTTTGGAAAAGGTAATGC 58.498 45.455 0.20 0.00 0.00 3.56
5021 7336 3.501950 GCGCTCTTTGGAAAAGGTAATG 58.498 45.455 0.00 0.00 0.00 1.90
5022 7337 2.161609 CGCGCTCTTTGGAAAAGGTAAT 59.838 45.455 5.56 0.00 0.00 1.89
5023 7338 1.533731 CGCGCTCTTTGGAAAAGGTAA 59.466 47.619 5.56 0.00 0.00 2.85
5024 7339 1.153353 CGCGCTCTTTGGAAAAGGTA 58.847 50.000 5.56 0.00 0.00 3.08
5025 7340 1.949257 CGCGCTCTTTGGAAAAGGT 59.051 52.632 5.56 0.00 0.00 3.50
5026 7341 1.442688 GCGCGCTCTTTGGAAAAGG 60.443 57.895 26.67 0.00 0.00 3.11
5027 7342 1.793613 CGCGCGCTCTTTGGAAAAG 60.794 57.895 30.48 4.48 0.00 2.27
5028 7343 2.251075 CGCGCGCTCTTTGGAAAA 59.749 55.556 30.48 0.00 0.00 2.29


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.