Multiple sequence alignment - TraesCS3B01G530600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G530600 chr3B 100.000 2052 0 0 2032 4083 771559120 771557069 0.000000e+00 3790.0
1 TraesCS3B01G530600 chr3B 100.000 1817 0 0 1 1817 771561151 771559335 0.000000e+00 3356.0
2 TraesCS3B01G530600 chr3B 84.089 1037 149 12 2094 3126 771533517 771532493 0.000000e+00 987.0
3 TraesCS3B01G530600 chr3B 78.195 931 163 34 2127 3046 771171538 771172439 3.560000e-155 558.0
4 TraesCS3B01G530600 chr3D 93.949 1256 59 6 2032 3287 578260460 578259222 0.000000e+00 1882.0
5 TraesCS3B01G530600 chr3D 84.457 1068 146 14 2094 3156 578243614 578242562 0.000000e+00 1035.0
6 TraesCS3B01G530600 chr3D 86.891 862 76 17 608 1447 578262373 578261527 0.000000e+00 931.0
7 TraesCS3B01G530600 chr3D 84.211 760 111 6 3331 4082 578259225 578258467 0.000000e+00 730.0
8 TraesCS3B01G530600 chr3D 78.132 942 170 26 2126 3058 577790177 577789263 2.130000e-157 566.0
9 TraesCS3B01G530600 chr3D 77.354 945 171 31 2140 3070 579501805 579500890 1.680000e-143 520.0
10 TraesCS3B01G530600 chr3D 89.860 286 24 4 6 286 578262656 578262371 3.000000e-96 363.0
11 TraesCS3B01G530600 chr3D 80.233 258 29 12 1565 1817 578260800 578260560 1.510000e-39 174.0
12 TraesCS3B01G530600 chr3D 100.000 43 0 0 760 802 578261273 578261231 3.380000e-11 80.5
13 TraesCS3B01G530600 chr3A 93.579 1277 59 9 2032 3287 713931332 713930058 0.000000e+00 1882.0
14 TraesCS3B01G530600 chr3A 85.075 1005 138 8 2112 3116 713869068 713868076 0.000000e+00 1014.0
15 TraesCS3B01G530600 chr3A 84.592 662 66 14 802 1447 713932392 713931751 3.470000e-175 625.0
16 TraesCS3B01G530600 chr3A 77.447 940 169 32 2142 3067 714614906 714615816 4.680000e-144 521.0
17 TraesCS3B01G530600 chr3A 90.000 250 20 3 6 250 713932787 713932538 6.590000e-83 318.0
18 TraesCS3B01G530600 chr3A 92.308 143 11 0 608 750 713932535 713932393 1.920000e-48 204.0
19 TraesCS3B01G530600 chr7B 96.049 329 11 1 285 611 178720654 178720982 6.010000e-148 534.0
20 TraesCS3B01G530600 chr7B 95.210 334 14 1 280 611 258507569 258507902 1.010000e-145 527.0
21 TraesCS3B01G530600 chr1B 95.509 334 13 1 280 611 262995128 262995461 2.160000e-147 532.0
22 TraesCS3B01G530600 chr1B 95.224 335 12 3 280 611 154282222 154281889 1.010000e-145 527.0
23 TraesCS3B01G530600 chr1B 94.970 338 14 2 277 611 156888069 156888406 1.010000e-145 527.0
24 TraesCS3B01G530600 chr6B 94.970 338 14 2 277 611 405763991 405764328 1.010000e-145 527.0
25 TraesCS3B01G530600 chr5B 94.970 338 14 2 277 611 52458996 52458659 1.010000e-145 527.0
26 TraesCS3B01G530600 chr5B 95.210 334 14 1 280 611 428685239 428684906 1.010000e-145 527.0
27 TraesCS3B01G530600 chr2D 95.210 334 14 1 280 611 628976515 628976848 1.010000e-145 527.0
28 TraesCS3B01G530600 chr4A 100.000 30 0 0 3305 3334 641600934 641600963 5.700000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G530600 chr3B 771557069 771561151 4082 True 3573.000000 3790 100.000000 1 4083 2 chr3B.!!$R2 4082
1 TraesCS3B01G530600 chr3B 771532493 771533517 1024 True 987.000000 987 84.089000 2094 3126 1 chr3B.!!$R1 1032
2 TraesCS3B01G530600 chr3B 771171538 771172439 901 False 558.000000 558 78.195000 2127 3046 1 chr3B.!!$F1 919
3 TraesCS3B01G530600 chr3D 578242562 578243614 1052 True 1035.000000 1035 84.457000 2094 3156 1 chr3D.!!$R2 1062
4 TraesCS3B01G530600 chr3D 578258467 578262656 4189 True 693.416667 1882 89.190667 6 4082 6 chr3D.!!$R4 4076
5 TraesCS3B01G530600 chr3D 577789263 577790177 914 True 566.000000 566 78.132000 2126 3058 1 chr3D.!!$R1 932
6 TraesCS3B01G530600 chr3D 579500890 579501805 915 True 520.000000 520 77.354000 2140 3070 1 chr3D.!!$R3 930
7 TraesCS3B01G530600 chr3A 713868076 713869068 992 True 1014.000000 1014 85.075000 2112 3116 1 chr3A.!!$R1 1004
8 TraesCS3B01G530600 chr3A 713930058 713932787 2729 True 757.250000 1882 90.119750 6 3287 4 chr3A.!!$R2 3281
9 TraesCS3B01G530600 chr3A 714614906 714615816 910 False 521.000000 521 77.447000 2142 3067 1 chr3A.!!$F1 925

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
615 621 0.037734 AAAAAGGGGGAGTAGCACCG 59.962 55.0 0.00 0.0 42.92 4.94 F
992 1009 0.253347 ATTCAGAGCCTTGGAGGGGA 60.253 55.0 0.00 0.0 35.37 4.81 F
1089 1106 0.629596 TCCCTCCAGGTACGTCTGAT 59.370 55.0 5.86 0.0 36.93 2.90 F
2206 2916 0.736325 GCGACGTGGTGCAGTTCTAT 60.736 55.0 0.00 0.0 0.00 1.98 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1443 1520 1.596934 GTGGAACTCGGCATCTGGA 59.403 57.895 0.00 0.0 0.00 3.86 R
2975 3688 1.262950 CTCGTTGAACATGGCGAACAA 59.737 47.619 0.00 0.0 32.84 2.83 R
3081 3794 2.270874 CTGCCGCCTAGGGGATGTTT 62.271 60.000 26.66 0.0 41.48 2.83 R
3226 3950 0.030638 GCACAAAGCCACGAACACAT 59.969 50.000 0.00 0.0 37.23 3.21 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
74 80 4.366684 GAGGGTGGGGGTTGCCAG 62.367 72.222 0.00 0.00 0.00 4.85
107 113 4.468689 GTCGCCCCTGTGTAGCCC 62.469 72.222 0.00 0.00 0.00 5.19
109 115 2.762459 CGCCCCTGTGTAGCCCTA 60.762 66.667 0.00 0.00 0.00 3.53
160 166 6.203723 GTCTTGGCTCGCTTATCTCAAATATT 59.796 38.462 0.00 0.00 0.00 1.28
229 235 9.956720 ATGCTTATCATTTAAGTACAAATCTGC 57.043 29.630 0.00 0.00 29.16 4.26
237 243 1.985159 AGTACAAATCTGCCAGTGGGA 59.015 47.619 12.15 7.39 35.59 4.37
288 294 9.106070 CCAATTTTTGGTACCTACTATGTACTC 57.894 37.037 14.36 0.00 45.93 2.59
289 295 9.106070 CAATTTTTGGTACCTACTATGTACTCC 57.894 37.037 14.36 0.00 38.84 3.85
290 296 6.796785 TTTTGGTACCTACTATGTACTCCC 57.203 41.667 14.36 0.00 38.84 4.30
291 297 5.739143 TTGGTACCTACTATGTACTCCCT 57.261 43.478 14.36 0.00 38.84 4.20
292 298 5.316158 TGGTACCTACTATGTACTCCCTC 57.684 47.826 14.36 0.00 38.84 4.30
293 299 4.105377 TGGTACCTACTATGTACTCCCTCC 59.895 50.000 14.36 0.00 38.84 4.30
294 300 4.353489 GGTACCTACTATGTACTCCCTCCT 59.647 50.000 4.06 0.00 38.84 3.69
295 301 5.163001 GGTACCTACTATGTACTCCCTCCTT 60.163 48.000 4.06 0.00 38.84 3.36
296 302 5.484734 ACCTACTATGTACTCCCTCCTTT 57.515 43.478 0.00 0.00 0.00 3.11
297 303 5.851418 ACCTACTATGTACTCCCTCCTTTT 58.149 41.667 0.00 0.00 0.00 2.27
298 304 5.898397 ACCTACTATGTACTCCCTCCTTTTC 59.102 44.000 0.00 0.00 0.00 2.29
299 305 5.009811 CCTACTATGTACTCCCTCCTTTTCG 59.990 48.000 0.00 0.00 0.00 3.46
300 306 3.705072 ACTATGTACTCCCTCCTTTTCGG 59.295 47.826 0.00 0.00 0.00 4.30
301 307 2.019807 TGTACTCCCTCCTTTTCGGT 57.980 50.000 0.00 0.00 0.00 4.69
302 308 2.332117 TGTACTCCCTCCTTTTCGGTT 58.668 47.619 0.00 0.00 0.00 4.44
303 309 2.707257 TGTACTCCCTCCTTTTCGGTTT 59.293 45.455 0.00 0.00 0.00 3.27
304 310 3.903090 TGTACTCCCTCCTTTTCGGTTTA 59.097 43.478 0.00 0.00 0.00 2.01
305 311 4.533311 TGTACTCCCTCCTTTTCGGTTTAT 59.467 41.667 0.00 0.00 0.00 1.40
306 312 5.721000 TGTACTCCCTCCTTTTCGGTTTATA 59.279 40.000 0.00 0.00 0.00 0.98
307 313 5.354842 ACTCCCTCCTTTTCGGTTTATAG 57.645 43.478 0.00 0.00 0.00 1.31
308 314 4.163649 ACTCCCTCCTTTTCGGTTTATAGG 59.836 45.833 0.00 0.00 0.00 2.57
309 315 3.457012 TCCCTCCTTTTCGGTTTATAGGG 59.543 47.826 0.00 0.00 41.33 3.53
310 316 3.211865 CCTCCTTTTCGGTTTATAGGGC 58.788 50.000 0.00 0.00 0.00 5.19
311 317 3.118000 CCTCCTTTTCGGTTTATAGGGCT 60.118 47.826 0.00 0.00 0.00 5.19
312 318 4.524053 CTCCTTTTCGGTTTATAGGGCTT 58.476 43.478 0.00 0.00 0.00 4.35
313 319 5.397109 CCTCCTTTTCGGTTTATAGGGCTTA 60.397 44.000 0.00 0.00 0.00 3.09
314 320 6.256643 TCCTTTTCGGTTTATAGGGCTTAT 57.743 37.500 0.00 0.00 0.00 1.73
315 321 6.293698 TCCTTTTCGGTTTATAGGGCTTATC 58.706 40.000 0.00 0.00 0.00 1.75
316 322 6.100714 TCCTTTTCGGTTTATAGGGCTTATCT 59.899 38.462 0.00 0.00 0.00 1.98
317 323 6.427242 CCTTTTCGGTTTATAGGGCTTATCTC 59.573 42.308 0.00 0.00 0.00 2.75
318 324 6.488769 TTTCGGTTTATAGGGCTTATCTCA 57.511 37.500 0.00 0.00 0.00 3.27
319 325 6.488769 TTCGGTTTATAGGGCTTATCTCAA 57.511 37.500 0.00 0.00 0.00 3.02
320 326 6.488769 TCGGTTTATAGGGCTTATCTCAAA 57.511 37.500 0.00 0.00 0.00 2.69
321 327 6.891388 TCGGTTTATAGGGCTTATCTCAAAA 58.109 36.000 0.00 0.00 0.00 2.44
322 328 7.514721 TCGGTTTATAGGGCTTATCTCAAAAT 58.485 34.615 0.00 0.00 0.00 1.82
323 329 7.996644 TCGGTTTATAGGGCTTATCTCAAAATT 59.003 33.333 0.00 0.00 0.00 1.82
324 330 8.630037 CGGTTTATAGGGCTTATCTCAAAATTT 58.370 33.333 0.00 0.00 0.00 1.82
332 338 9.929180 AGGGCTTATCTCAAAATTTTAGTTTTC 57.071 29.630 2.44 0.00 0.00 2.29
333 339 9.151471 GGGCTTATCTCAAAATTTTAGTTTTCC 57.849 33.333 2.44 0.00 0.00 3.13
334 340 9.151471 GGCTTATCTCAAAATTTTAGTTTTCCC 57.849 33.333 2.44 0.00 0.00 3.97
335 341 9.705290 GCTTATCTCAAAATTTTAGTTTTCCCA 57.295 29.630 2.44 0.00 0.00 4.37
356 362 8.893563 TCCCATTTTATAAGACTCAATTTGGT 57.106 30.769 0.00 0.00 0.00 3.67
357 363 9.320295 TCCCATTTTATAAGACTCAATTTGGTT 57.680 29.630 0.00 0.00 0.00 3.67
358 364 9.369904 CCCATTTTATAAGACTCAATTTGGTTG 57.630 33.333 0.00 0.00 39.25 3.77
359 365 9.927668 CCATTTTATAAGACTCAATTTGGTTGT 57.072 29.630 0.00 0.00 38.95 3.32
364 370 9.974980 TTATAAGACTCAATTTGGTTGTTTTCC 57.025 29.630 0.00 0.00 38.95 3.13
365 371 5.930837 AGACTCAATTTGGTTGTTTTCCA 57.069 34.783 0.00 0.00 38.95 3.53
366 372 6.484364 AGACTCAATTTGGTTGTTTTCCAT 57.516 33.333 0.00 0.00 38.95 3.41
367 373 6.515832 AGACTCAATTTGGTTGTTTTCCATC 58.484 36.000 0.00 0.00 38.95 3.51
368 374 6.098124 AGACTCAATTTGGTTGTTTTCCATCA 59.902 34.615 0.00 0.00 38.95 3.07
369 375 6.048509 ACTCAATTTGGTTGTTTTCCATCAC 58.951 36.000 0.00 0.00 38.95 3.06
370 376 5.982356 TCAATTTGGTTGTTTTCCATCACA 58.018 33.333 0.00 0.00 38.95 3.58
371 377 6.590068 TCAATTTGGTTGTTTTCCATCACAT 58.410 32.000 0.00 0.00 38.95 3.21
372 378 6.482641 TCAATTTGGTTGTTTTCCATCACATG 59.517 34.615 0.00 0.00 38.95 3.21
373 379 5.350504 TTTGGTTGTTTTCCATCACATGT 57.649 34.783 0.00 0.00 34.75 3.21
374 380 5.350504 TTGGTTGTTTTCCATCACATGTT 57.649 34.783 0.00 0.00 34.75 2.71
375 381 4.942852 TGGTTGTTTTCCATCACATGTTC 58.057 39.130 0.00 0.00 0.00 3.18
376 382 4.403752 TGGTTGTTTTCCATCACATGTTCA 59.596 37.500 0.00 0.00 0.00 3.18
377 383 5.105187 TGGTTGTTTTCCATCACATGTTCAA 60.105 36.000 0.00 0.00 0.00 2.69
378 384 5.814705 GGTTGTTTTCCATCACATGTTCAAA 59.185 36.000 0.00 0.00 0.00 2.69
379 385 6.482973 GGTTGTTTTCCATCACATGTTCAAAT 59.517 34.615 0.00 0.00 0.00 2.32
380 386 7.012232 GGTTGTTTTCCATCACATGTTCAAATT 59.988 33.333 0.00 0.00 0.00 1.82
381 387 7.712264 TGTTTTCCATCACATGTTCAAATTC 57.288 32.000 0.00 0.00 0.00 2.17
382 388 6.705381 TGTTTTCCATCACATGTTCAAATTCC 59.295 34.615 0.00 0.00 0.00 3.01
383 389 6.416631 TTTCCATCACATGTTCAAATTCCA 57.583 33.333 0.00 0.00 0.00 3.53
384 390 6.416631 TTCCATCACATGTTCAAATTCCAA 57.583 33.333 0.00 0.00 0.00 3.53
385 391 6.028146 TCCATCACATGTTCAAATTCCAAG 57.972 37.500 0.00 0.00 0.00 3.61
386 392 5.047164 TCCATCACATGTTCAAATTCCAAGG 60.047 40.000 0.00 0.00 0.00 3.61
387 393 5.279607 CCATCACATGTTCAAATTCCAAGGT 60.280 40.000 0.00 0.00 0.00 3.50
388 394 5.199024 TCACATGTTCAAATTCCAAGGTG 57.801 39.130 0.00 0.00 0.00 4.00
389 395 3.742369 CACATGTTCAAATTCCAAGGTGC 59.258 43.478 0.00 0.00 0.00 5.01
390 396 3.387374 ACATGTTCAAATTCCAAGGTGCA 59.613 39.130 0.00 0.00 0.00 4.57
391 397 4.040706 ACATGTTCAAATTCCAAGGTGCAT 59.959 37.500 0.00 0.00 0.00 3.96
392 398 4.686191 TGTTCAAATTCCAAGGTGCATT 57.314 36.364 0.00 0.00 0.00 3.56
393 399 5.798125 TGTTCAAATTCCAAGGTGCATTA 57.202 34.783 0.00 0.00 0.00 1.90
394 400 6.166984 TGTTCAAATTCCAAGGTGCATTAA 57.833 33.333 0.00 0.00 0.00 1.40
395 401 6.586344 TGTTCAAATTCCAAGGTGCATTAAA 58.414 32.000 0.00 0.00 0.00 1.52
396 402 7.050377 TGTTCAAATTCCAAGGTGCATTAAAA 58.950 30.769 0.00 0.00 0.00 1.52
397 403 7.718753 TGTTCAAATTCCAAGGTGCATTAAAAT 59.281 29.630 0.00 0.00 0.00 1.82
398 404 8.567104 GTTCAAATTCCAAGGTGCATTAAAATT 58.433 29.630 0.00 0.00 0.00 1.82
399 405 8.097078 TCAAATTCCAAGGTGCATTAAAATTG 57.903 30.769 0.00 0.00 0.00 2.32
400 406 6.499234 AATTCCAAGGTGCATTAAAATTGC 57.501 33.333 0.00 0.00 0.00 3.56
401 407 4.613925 TCCAAGGTGCATTAAAATTGCA 57.386 36.364 0.00 0.00 36.09 4.08
402 408 5.163281 TCCAAGGTGCATTAAAATTGCAT 57.837 34.783 5.57 0.00 40.84 3.96
403 409 4.936411 TCCAAGGTGCATTAAAATTGCATG 59.064 37.500 5.57 1.14 40.84 4.06
404 410 4.437659 CCAAGGTGCATTAAAATTGCATGC 60.438 41.667 11.82 11.82 43.13 4.06
414 420 9.640974 GCATTAAAATTGCATGCAAGTATTAAG 57.359 29.630 34.15 25.73 42.49 1.85
419 425 9.709495 AAAATTGCATGCAAGTATTAAGAGAAA 57.291 25.926 34.15 10.19 39.47 2.52
420 426 9.709495 AAATTGCATGCAAGTATTAAGAGAAAA 57.291 25.926 34.15 9.52 39.47 2.29
421 427 9.880157 AATTGCATGCAAGTATTAAGAGAAAAT 57.120 25.926 34.15 12.14 39.47 1.82
422 428 9.880157 ATTGCATGCAAGTATTAAGAGAAAATT 57.120 25.926 34.15 11.77 39.47 1.82
423 429 8.692110 TGCATGCAAGTATTAAGAGAAAATTG 57.308 30.769 20.30 0.00 0.00 2.32
424 430 8.522003 TGCATGCAAGTATTAAGAGAAAATTGA 58.478 29.630 20.30 0.00 0.00 2.57
425 431 8.801913 GCATGCAAGTATTAAGAGAAAATTGAC 58.198 33.333 14.21 0.00 0.00 3.18
426 432 9.294030 CATGCAAGTATTAAGAGAAAATTGACC 57.706 33.333 0.00 0.00 0.00 4.02
427 433 8.402798 TGCAAGTATTAAGAGAAAATTGACCA 57.597 30.769 0.00 0.00 0.00 4.02
428 434 8.855110 TGCAAGTATTAAGAGAAAATTGACCAA 58.145 29.630 0.00 0.00 0.00 3.67
429 435 9.860898 GCAAGTATTAAGAGAAAATTGACCAAT 57.139 29.630 0.00 0.00 0.00 3.16
431 437 9.860898 AAGTATTAAGAGAAAATTGACCAATGC 57.139 29.630 0.00 0.00 0.00 3.56
432 438 9.023962 AGTATTAAGAGAAAATTGACCAATGCA 57.976 29.630 0.00 0.00 0.00 3.96
433 439 9.807649 GTATTAAGAGAAAATTGACCAATGCAT 57.192 29.630 0.00 0.00 0.00 3.96
434 440 8.712285 ATTAAGAGAAAATTGACCAATGCATG 57.288 30.769 0.00 0.00 0.00 4.06
435 441 5.733620 AGAGAAAATTGACCAATGCATGT 57.266 34.783 0.00 0.00 0.00 3.21
436 442 6.839124 AGAGAAAATTGACCAATGCATGTA 57.161 33.333 0.00 0.00 0.00 2.29
437 443 7.414222 AGAGAAAATTGACCAATGCATGTAT 57.586 32.000 0.00 0.00 0.00 2.29
438 444 7.844009 AGAGAAAATTGACCAATGCATGTATT 58.156 30.769 0.00 2.84 0.00 1.89
439 445 8.316214 AGAGAAAATTGACCAATGCATGTATTT 58.684 29.630 6.26 0.00 0.00 1.40
440 446 8.851541 AGAAAATTGACCAATGCATGTATTTT 57.148 26.923 6.26 5.30 0.00 1.82
441 447 9.941325 AGAAAATTGACCAATGCATGTATTTTA 57.059 25.926 6.26 0.00 0.00 1.52
508 514 9.612066 TTTTTGAGGAAAACAAGAGCATTAATT 57.388 25.926 0.00 0.00 32.44 1.40
510 516 9.912634 TTTGAGGAAAACAAGAGCATTAATTAG 57.087 29.630 0.00 0.00 0.00 1.73
511 517 8.055279 TGAGGAAAACAAGAGCATTAATTAGG 57.945 34.615 0.00 0.00 0.00 2.69
512 518 7.669722 TGAGGAAAACAAGAGCATTAATTAGGT 59.330 33.333 0.00 0.00 0.00 3.08
513 519 7.830739 AGGAAAACAAGAGCATTAATTAGGTG 58.169 34.615 0.00 0.00 0.00 4.00
514 520 6.531594 GGAAAACAAGAGCATTAATTAGGTGC 59.468 38.462 13.92 13.92 39.10 5.01
520 526 6.035327 CAAGAGCATTAATTAGGTGCTTTTGC 59.965 38.462 26.63 16.56 46.67 3.68
539 545 9.420966 GCTTTTGCAAAACTACAAAAAGTATTC 57.579 29.630 20.46 0.00 43.15 1.75
540 546 9.914923 CTTTTGCAAAACTACAAAAAGTATTCC 57.085 29.630 20.46 0.00 43.15 3.01
541 547 9.436957 TTTTGCAAAACTACAAAAAGTATTCCA 57.563 25.926 20.46 0.00 41.44 3.53
542 548 7.995463 TGCAAAACTACAAAAAGTATTCCAC 57.005 32.000 0.00 0.00 30.93 4.02
543 549 6.981559 TGCAAAACTACAAAAAGTATTCCACC 59.018 34.615 0.00 0.00 30.93 4.61
544 550 6.981559 GCAAAACTACAAAAAGTATTCCACCA 59.018 34.615 0.00 0.00 30.93 4.17
545 551 7.042992 GCAAAACTACAAAAAGTATTCCACCAC 60.043 37.037 0.00 0.00 30.93 4.16
546 552 7.891498 AAACTACAAAAAGTATTCCACCACT 57.109 32.000 0.00 0.00 30.93 4.00
547 553 7.506328 AACTACAAAAAGTATTCCACCACTC 57.494 36.000 0.00 0.00 30.93 3.51
548 554 6.597562 ACTACAAAAAGTATTCCACCACTCA 58.402 36.000 0.00 0.00 30.93 3.41
549 555 5.767816 ACAAAAAGTATTCCACCACTCAC 57.232 39.130 0.00 0.00 0.00 3.51
550 556 4.583073 ACAAAAAGTATTCCACCACTCACC 59.417 41.667 0.00 0.00 0.00 4.02
551 557 4.447138 AAAAGTATTCCACCACTCACCA 57.553 40.909 0.00 0.00 0.00 4.17
552 558 4.657814 AAAGTATTCCACCACTCACCAT 57.342 40.909 0.00 0.00 0.00 3.55
553 559 3.914426 AGTATTCCACCACTCACCATC 57.086 47.619 0.00 0.00 0.00 3.51
554 560 3.454858 AGTATTCCACCACTCACCATCT 58.545 45.455 0.00 0.00 0.00 2.90
555 561 4.620723 AGTATTCCACCACTCACCATCTA 58.379 43.478 0.00 0.00 0.00 1.98
556 562 3.914426 ATTCCACCACTCACCATCTAC 57.086 47.619 0.00 0.00 0.00 2.59
557 563 1.568504 TCCACCACTCACCATCTACC 58.431 55.000 0.00 0.00 0.00 3.18
558 564 1.078823 TCCACCACTCACCATCTACCT 59.921 52.381 0.00 0.00 0.00 3.08
559 565 1.909302 CCACCACTCACCATCTACCTT 59.091 52.381 0.00 0.00 0.00 3.50
560 566 2.355108 CCACCACTCACCATCTACCTTG 60.355 54.545 0.00 0.00 0.00 3.61
561 567 2.567169 CACCACTCACCATCTACCTTGA 59.433 50.000 0.00 0.00 0.00 3.02
562 568 3.198635 CACCACTCACCATCTACCTTGAT 59.801 47.826 0.00 0.00 0.00 2.57
563 569 3.846588 ACCACTCACCATCTACCTTGATT 59.153 43.478 0.00 0.00 0.00 2.57
564 570 4.194640 CCACTCACCATCTACCTTGATTG 58.805 47.826 0.00 0.00 0.00 2.67
565 571 4.194640 CACTCACCATCTACCTTGATTGG 58.805 47.826 0.00 0.00 0.00 3.16
566 572 3.846588 ACTCACCATCTACCTTGATTGGT 59.153 43.478 0.00 0.00 43.66 3.67
567 573 4.194640 CTCACCATCTACCTTGATTGGTG 58.805 47.826 12.94 12.94 41.47 4.17
568 574 3.843619 TCACCATCTACCTTGATTGGTGA 59.156 43.478 16.77 16.77 43.59 4.02
569 575 4.080919 TCACCATCTACCTTGATTGGTGAG 60.081 45.833 16.77 0.00 42.49 3.51
570 576 4.080919 CACCATCTACCTTGATTGGTGAGA 60.081 45.833 13.72 0.00 41.99 3.27
571 577 4.723789 ACCATCTACCTTGATTGGTGAGAT 59.276 41.667 0.00 0.00 41.05 2.75
572 578 5.192522 ACCATCTACCTTGATTGGTGAGATT 59.807 40.000 0.00 0.00 41.05 2.40
573 579 6.125029 CCATCTACCTTGATTGGTGAGATTT 58.875 40.000 0.00 0.00 41.05 2.17
574 580 6.604795 CCATCTACCTTGATTGGTGAGATTTT 59.395 38.462 0.00 0.00 41.05 1.82
575 581 7.123247 CCATCTACCTTGATTGGTGAGATTTTT 59.877 37.037 0.00 0.00 41.05 1.94
576 582 7.452880 TCTACCTTGATTGGTGAGATTTTTG 57.547 36.000 0.00 0.00 41.05 2.44
577 583 7.230747 TCTACCTTGATTGGTGAGATTTTTGA 58.769 34.615 0.00 0.00 41.05 2.69
578 584 6.729690 ACCTTGATTGGTGAGATTTTTGAA 57.270 33.333 0.00 0.00 39.17 2.69
579 585 7.307131 ACCTTGATTGGTGAGATTTTTGAAT 57.693 32.000 0.00 0.00 39.17 2.57
580 586 7.738847 ACCTTGATTGGTGAGATTTTTGAATT 58.261 30.769 0.00 0.00 39.17 2.17
581 587 7.658575 ACCTTGATTGGTGAGATTTTTGAATTG 59.341 33.333 0.00 0.00 39.17 2.32
582 588 7.874016 CCTTGATTGGTGAGATTTTTGAATTGA 59.126 33.333 0.00 0.00 0.00 2.57
583 589 8.821147 TTGATTGGTGAGATTTTTGAATTGAG 57.179 30.769 0.00 0.00 0.00 3.02
584 590 6.869913 TGATTGGTGAGATTTTTGAATTGAGC 59.130 34.615 0.00 0.00 0.00 4.26
585 591 5.138125 TGGTGAGATTTTTGAATTGAGCC 57.862 39.130 0.00 0.00 0.00 4.70
586 592 4.588106 TGGTGAGATTTTTGAATTGAGCCA 59.412 37.500 0.00 0.00 0.00 4.75
587 593 5.246656 TGGTGAGATTTTTGAATTGAGCCAT 59.753 36.000 0.00 0.00 0.00 4.40
588 594 6.436847 TGGTGAGATTTTTGAATTGAGCCATA 59.563 34.615 0.00 0.00 0.00 2.74
589 595 7.124599 TGGTGAGATTTTTGAATTGAGCCATAT 59.875 33.333 0.00 0.00 0.00 1.78
590 596 8.632679 GGTGAGATTTTTGAATTGAGCCATATA 58.367 33.333 0.00 0.00 0.00 0.86
594 600 9.822185 AGATTTTTGAATTGAGCCATATAAACC 57.178 29.630 0.00 0.00 0.00 3.27
595 601 8.647143 ATTTTTGAATTGAGCCATATAAACCG 57.353 30.769 0.00 0.00 0.00 4.44
596 602 7.397892 TTTTGAATTGAGCCATATAAACCGA 57.602 32.000 0.00 0.00 0.00 4.69
597 603 7.397892 TTTGAATTGAGCCATATAAACCGAA 57.602 32.000 0.00 0.00 0.00 4.30
598 604 7.397892 TTGAATTGAGCCATATAAACCGAAA 57.602 32.000 0.00 0.00 0.00 3.46
599 605 7.397892 TGAATTGAGCCATATAAACCGAAAA 57.602 32.000 0.00 0.00 0.00 2.29
600 606 7.831753 TGAATTGAGCCATATAAACCGAAAAA 58.168 30.769 0.00 0.00 0.00 1.94
601 607 7.973388 TGAATTGAGCCATATAAACCGAAAAAG 59.027 33.333 0.00 0.00 0.00 2.27
602 608 5.828299 TGAGCCATATAAACCGAAAAAGG 57.172 39.130 0.00 0.00 37.30 3.11
603 609 4.642885 TGAGCCATATAAACCGAAAAAGGG 59.357 41.667 0.00 0.00 35.02 3.95
604 610 3.958147 AGCCATATAAACCGAAAAAGGGG 59.042 43.478 0.00 0.00 35.02 4.79
605 611 3.069016 GCCATATAAACCGAAAAAGGGGG 59.931 47.826 0.00 0.00 35.02 5.40
606 612 4.538738 CCATATAAACCGAAAAAGGGGGA 58.461 43.478 0.00 0.00 35.02 4.81
615 621 0.037734 AAAAAGGGGGAGTAGCACCG 59.962 55.000 0.00 0.00 42.92 4.94
618 624 1.265454 AAGGGGGAGTAGCACCGAAG 61.265 60.000 0.00 0.00 42.92 3.79
631 637 5.741388 AGCACCGAAGATGTGAATATTTC 57.259 39.130 0.00 0.00 0.00 2.17
634 640 5.730568 GCACCGAAGATGTGAATATTTCCAC 60.731 44.000 1.29 1.29 0.00 4.02
637 643 5.586243 CCGAAGATGTGAATATTTCCACTGT 59.414 40.000 8.32 0.00 34.57 3.55
654 660 1.073763 CTGTTGGACCATCTTGACCCA 59.926 52.381 0.00 0.00 0.00 4.51
698 704 4.637483 ATCCATCAACATTAACCTTGCG 57.363 40.909 0.00 0.00 0.00 4.85
721 727 5.009854 GCATAAATGTGGTGCCAACTATT 57.990 39.130 0.00 0.00 32.88 1.73
722 728 5.418676 GCATAAATGTGGTGCCAACTATTT 58.581 37.500 11.41 11.41 32.88 1.40
723 729 5.519927 GCATAAATGTGGTGCCAACTATTTC 59.480 40.000 10.53 0.00 32.88 2.17
724 730 4.535526 AAATGTGGTGCCAACTATTTCC 57.464 40.909 0.00 0.00 0.00 3.13
725 731 2.666272 TGTGGTGCCAACTATTTCCA 57.334 45.000 0.00 0.00 0.00 3.53
726 732 2.235016 TGTGGTGCCAACTATTTCCAC 58.765 47.619 0.00 0.00 43.58 4.02
727 733 2.158534 TGTGGTGCCAACTATTTCCACT 60.159 45.455 12.25 0.00 43.64 4.00
728 734 2.890945 GTGGTGCCAACTATTTCCACTT 59.109 45.455 0.00 0.00 41.14 3.16
729 735 3.057526 GTGGTGCCAACTATTTCCACTTC 60.058 47.826 0.00 0.00 41.14 3.01
730 736 3.181434 TGGTGCCAACTATTTCCACTTCT 60.181 43.478 0.00 0.00 0.00 2.85
731 737 4.042311 TGGTGCCAACTATTTCCACTTCTA 59.958 41.667 0.00 0.00 0.00 2.10
806 823 1.107945 TGGACTGCCATGATGCAATG 58.892 50.000 0.00 0.00 41.51 2.82
809 826 1.746787 GACTGCCATGATGCAATGACA 59.253 47.619 0.00 0.00 41.51 3.58
823 840 3.622163 GCAATGACAGATCTGACCTTGAG 59.378 47.826 31.27 16.39 34.76 3.02
829 846 3.260740 CAGATCTGACCTTGAGAGTTGC 58.739 50.000 18.34 0.00 0.00 4.17
848 865 3.513517 TGCCTACCCTTACACTAGTGTT 58.486 45.455 32.15 17.07 41.83 3.32
965 982 1.404391 GCCGTTGGAGTAGATCGAGAA 59.596 52.381 0.00 0.00 0.00 2.87
977 994 2.237143 AGATCGAGAACTGGGCAATTCA 59.763 45.455 0.00 0.00 0.00 2.57
991 1008 0.627986 AATTCAGAGCCTTGGAGGGG 59.372 55.000 0.00 0.00 35.37 4.79
992 1009 0.253347 ATTCAGAGCCTTGGAGGGGA 60.253 55.000 0.00 0.00 35.37 4.81
1070 1087 1.617947 GGAGTCTTCATCGCCCAGGT 61.618 60.000 0.00 0.00 0.00 4.00
1075 1092 2.317149 CTTCATCGCCCAGGTCCCTC 62.317 65.000 0.00 0.00 0.00 4.30
1082 1099 1.689582 CCCAGGTCCCTCCAGGTAC 60.690 68.421 0.00 0.00 40.75 3.34
1085 1102 1.000107 AGGTCCCTCCAGGTACGTC 60.000 63.158 0.00 0.00 39.02 4.34
1089 1106 0.629596 TCCCTCCAGGTACGTCTGAT 59.370 55.000 5.86 0.00 36.93 2.90
1093 1110 2.359531 CCTCCAGGTACGTCTGATTCTC 59.640 54.545 5.86 0.00 36.93 2.87
1123 1140 5.507985 GGAGTTTGGAAGTGGATCTGTTTTG 60.508 44.000 0.00 0.00 0.00 2.44
1130 1147 5.451798 GGAAGTGGATCTGTTTTGCTTTTCA 60.452 40.000 0.00 0.00 0.00 2.69
1143 1160 8.299570 TGTTTTGCTTTTCATTTGCCTTTTAAA 58.700 25.926 0.00 0.00 0.00 1.52
1184 1207 8.924511 TCTGTAAGAATTGTCCATCTTTCTTT 57.075 30.769 2.50 0.00 42.31 2.52
1185 1208 9.354673 TCTGTAAGAATTGTCCATCTTTCTTTT 57.645 29.630 2.50 0.00 42.31 2.27
1224 1248 8.575565 TTATCGTAGAACAAGCAGATTATGTC 57.424 34.615 0.00 0.00 43.58 3.06
1225 1249 6.208988 TCGTAGAACAAGCAGATTATGTCT 57.791 37.500 0.00 0.00 37.80 3.41
1229 1253 7.043325 CGTAGAACAAGCAGATTATGTCTTACC 60.043 40.741 0.00 0.00 34.00 2.85
1234 1258 5.086104 AGCAGATTATGTCTTACCACGTT 57.914 39.130 0.00 0.00 34.00 3.99
1245 1269 6.259638 TGTCTTACCACGTTTTGATTTGAAC 58.740 36.000 0.00 0.00 0.00 3.18
1264 1288 8.833231 TTTGAACGAAGTCTTCTCTTATGAAT 57.167 30.769 10.81 0.00 45.00 2.57
1266 1290 8.833231 TGAACGAAGTCTTCTCTTATGAATTT 57.167 30.769 10.81 0.00 45.00 1.82
1268 1292 7.602517 ACGAAGTCTTCTCTTATGAATTTGG 57.397 36.000 10.81 0.00 29.74 3.28
1269 1293 6.595716 ACGAAGTCTTCTCTTATGAATTTGGG 59.404 38.462 10.81 0.00 29.74 4.12
1299 1331 3.817709 ATTAGAGAAGGAGCAGAGCAC 57.182 47.619 0.00 0.00 0.00 4.40
1320 1367 6.093082 AGCACGTTTTGTAGGGTATTTGTATC 59.907 38.462 0.00 0.00 0.00 2.24
1367 1414 6.899393 TTGTGAGGTTCTGCTATCAAAATT 57.101 33.333 0.00 0.00 0.00 1.82
1398 1445 6.036083 GGATTTGTCGGATATTCATATCGGTG 59.964 42.308 11.91 1.96 39.98 4.94
1400 1447 6.578163 TTGTCGGATATTCATATCGGTGTA 57.422 37.500 11.91 1.61 39.98 2.90
1431 1478 7.436118 GGTTTCGTACCACTATATACATGGAA 58.564 38.462 13.17 0.00 46.92 3.53
1434 1481 9.887629 TTTCGTACCACTATATACATGGAAAAA 57.112 29.630 13.17 6.64 36.94 1.94
1447 1524 5.969423 ACATGGAAAAAGTTGCATATCCAG 58.031 37.500 0.00 0.00 43.28 3.86
1471 1548 3.270877 GCCGAGTTCCACTGATGTATTT 58.729 45.455 0.00 0.00 0.00 1.40
1475 1552 5.411361 CCGAGTTCCACTGATGTATTTTGAA 59.589 40.000 0.00 0.00 0.00 2.69
1476 1553 6.094048 CCGAGTTCCACTGATGTATTTTGAAT 59.906 38.462 0.00 0.00 0.00 2.57
1477 1554 6.963242 CGAGTTCCACTGATGTATTTTGAATG 59.037 38.462 0.00 0.00 0.00 2.67
1478 1555 7.361201 CGAGTTCCACTGATGTATTTTGAATGT 60.361 37.037 0.00 0.00 0.00 2.71
1479 1556 8.181904 AGTTCCACTGATGTATTTTGAATGTT 57.818 30.769 0.00 0.00 0.00 2.71
1480 1557 8.299570 AGTTCCACTGATGTATTTTGAATGTTC 58.700 33.333 0.00 0.00 0.00 3.18
1482 1559 8.408043 TCCACTGATGTATTTTGAATGTTCTT 57.592 30.769 0.00 0.00 0.00 2.52
1483 1560 8.514594 TCCACTGATGTATTTTGAATGTTCTTC 58.485 33.333 0.00 0.00 0.00 2.87
1484 1561 8.298854 CCACTGATGTATTTTGAATGTTCTTCA 58.701 33.333 0.00 0.00 0.00 3.02
1485 1562 9.121517 CACTGATGTATTTTGAATGTTCTTCAC 57.878 33.333 0.00 0.00 0.00 3.18
1486 1563 9.071276 ACTGATGTATTTTGAATGTTCTTCACT 57.929 29.630 0.00 0.00 0.00 3.41
1487 1564 9.903682 CTGATGTATTTTGAATGTTCTTCACTT 57.096 29.630 0.00 0.00 0.00 3.16
1494 1571 9.874205 ATTTTGAATGTTCTTCACTTTTCTGAA 57.126 25.926 0.00 0.00 0.00 3.02
1495 1572 8.687824 TTTGAATGTTCTTCACTTTTCTGAAC 57.312 30.769 0.00 0.00 37.92 3.18
1496 1573 6.795399 TGAATGTTCTTCACTTTTCTGAACC 58.205 36.000 0.00 0.00 36.98 3.62
1497 1574 6.603201 TGAATGTTCTTCACTTTTCTGAACCT 59.397 34.615 0.00 0.00 36.98 3.50
1498 1575 7.122650 TGAATGTTCTTCACTTTTCTGAACCTT 59.877 33.333 0.00 0.00 36.98 3.50
1499 1576 6.834168 TGTTCTTCACTTTTCTGAACCTTT 57.166 33.333 0.00 0.00 36.98 3.11
1500 1577 7.227049 TGTTCTTCACTTTTCTGAACCTTTT 57.773 32.000 0.00 0.00 36.98 2.27
1501 1578 7.666623 TGTTCTTCACTTTTCTGAACCTTTTT 58.333 30.769 0.00 0.00 36.98 1.94
1519 1596 3.810310 TTTTTGCGGGTGATTCACTTT 57.190 38.095 16.02 0.00 34.40 2.66
1520 1597 3.810310 TTTTGCGGGTGATTCACTTTT 57.190 38.095 16.02 0.00 34.40 2.27
1521 1598 3.363341 TTTGCGGGTGATTCACTTTTC 57.637 42.857 16.02 0.00 34.40 2.29
1522 1599 2.270352 TGCGGGTGATTCACTTTTCT 57.730 45.000 16.02 0.00 34.40 2.52
1523 1600 1.879380 TGCGGGTGATTCACTTTTCTG 59.121 47.619 16.02 6.08 34.40 3.02
1524 1601 2.151202 GCGGGTGATTCACTTTTCTGA 58.849 47.619 16.02 0.00 34.40 3.27
1525 1602 2.552315 GCGGGTGATTCACTTTTCTGAA 59.448 45.455 16.02 0.00 34.40 3.02
1526 1603 3.609409 GCGGGTGATTCACTTTTCTGAAC 60.609 47.826 16.02 0.00 32.95 3.18
1527 1604 3.815401 CGGGTGATTCACTTTTCTGAACT 59.185 43.478 16.02 0.00 32.95 3.01
1528 1605 4.275936 CGGGTGATTCACTTTTCTGAACTT 59.724 41.667 16.02 0.00 32.95 2.66
1639 1719 7.315066 TGCATAAGGATAACTGATGTATCCA 57.685 36.000 11.92 0.00 39.86 3.41
1640 1720 7.921304 TGCATAAGGATAACTGATGTATCCAT 58.079 34.615 11.92 3.90 39.86 3.41
1705 1785 2.038033 GCTGTTTACAGTGGTACTCCCA 59.962 50.000 11.23 0.00 45.45 4.37
1754 2457 8.624776 ACAAGGCTTATTTGATTTGTCTATAGC 58.375 33.333 0.00 0.00 0.00 2.97
1756 2459 6.717084 AGGCTTATTTGATTTGTCTATAGCCC 59.283 38.462 0.00 0.00 36.93 5.19
2059 2766 2.288666 ACTGATGCGTATGCCGATTTT 58.711 42.857 4.05 0.00 41.78 1.82
2060 2767 3.462982 ACTGATGCGTATGCCGATTTTA 58.537 40.909 4.05 0.00 41.78 1.52
2206 2916 0.736325 GCGACGTGGTGCAGTTCTAT 60.736 55.000 0.00 0.00 0.00 1.98
2228 2938 2.922283 AGATTCTTGGGGATCACCAACT 59.078 45.455 25.99 17.72 45.19 3.16
2485 3198 1.301479 GAACCTCAACGACGCCCTT 60.301 57.895 0.00 0.00 0.00 3.95
2918 3631 4.029809 GGGCGTACAACCAGGGCT 62.030 66.667 4.44 0.00 0.00 5.19
3070 3783 0.920438 AATTGCCCGTGTACCCCATA 59.080 50.000 0.00 0.00 0.00 2.74
3081 3794 4.512198 CGTGTACCCCATAAAATTCGCATA 59.488 41.667 0.00 0.00 0.00 3.14
3116 3836 0.038892 GCAGCCAACCACATGAACTG 60.039 55.000 0.00 0.00 0.00 3.16
3140 3860 3.068307 CGTGGGTTTAATTTGGTGGACAA 59.932 43.478 0.00 0.00 37.28 3.18
3246 3978 1.308783 TGTGTTCGTGGCTTTGTGCA 61.309 50.000 0.00 0.00 45.15 4.57
3247 3979 0.030638 GTGTTCGTGGCTTTGTGCAT 59.969 50.000 0.00 0.00 45.15 3.96
3269 4005 1.388547 AGCTTGTTCCGTTGCTTTCA 58.611 45.000 0.00 0.00 30.96 2.69
3287 4023 0.615331 CAGTCCCTGTGGCATGTACT 59.385 55.000 0.00 0.00 0.00 2.73
3288 4024 0.905357 AGTCCCTGTGGCATGTACTC 59.095 55.000 0.00 0.00 0.00 2.59
3289 4025 0.107654 GTCCCTGTGGCATGTACTCC 60.108 60.000 0.00 0.00 0.00 3.85
3290 4026 1.224592 CCCTGTGGCATGTACTCCC 59.775 63.158 0.00 0.00 0.00 4.30
3291 4027 1.274703 CCCTGTGGCATGTACTCCCT 61.275 60.000 0.00 0.00 0.00 4.20
3292 4028 0.620556 CCTGTGGCATGTACTCCCTT 59.379 55.000 0.00 0.00 0.00 3.95
3293 4029 1.407437 CCTGTGGCATGTACTCCCTTC 60.407 57.143 0.00 0.00 0.00 3.46
3294 4030 0.249120 TGTGGCATGTACTCCCTTCG 59.751 55.000 0.00 0.00 0.00 3.79
3295 4031 0.249398 GTGGCATGTACTCCCTTCGT 59.751 55.000 0.00 0.00 0.00 3.85
3296 4032 0.535335 TGGCATGTACTCCCTTCGTC 59.465 55.000 0.00 0.00 0.00 4.20
3297 4033 0.179081 GGCATGTACTCCCTTCGTCC 60.179 60.000 0.00 0.00 0.00 4.79
3298 4034 0.179081 GCATGTACTCCCTTCGTCCC 60.179 60.000 0.00 0.00 0.00 4.46
3299 4035 1.191535 CATGTACTCCCTTCGTCCCA 58.808 55.000 0.00 0.00 0.00 4.37
3300 4036 1.553248 CATGTACTCCCTTCGTCCCAA 59.447 52.381 0.00 0.00 0.00 4.12
3301 4037 1.719529 TGTACTCCCTTCGTCCCAAA 58.280 50.000 0.00 0.00 0.00 3.28
3302 4038 2.048601 TGTACTCCCTTCGTCCCAAAA 58.951 47.619 0.00 0.00 0.00 2.44
3303 4039 2.438763 TGTACTCCCTTCGTCCCAAAAA 59.561 45.455 0.00 0.00 0.00 1.94
3324 4060 3.806316 AAGACACTTATTTTGCGACGG 57.194 42.857 0.00 0.00 0.00 4.79
3325 4061 3.034721 AGACACTTATTTTGCGACGGA 57.965 42.857 0.00 0.00 0.00 4.69
3326 4062 2.993899 AGACACTTATTTTGCGACGGAG 59.006 45.455 0.00 0.00 0.00 4.63
3327 4063 2.073816 ACACTTATTTTGCGACGGAGG 58.926 47.619 0.00 0.00 0.00 4.30
3328 4064 2.289195 ACACTTATTTTGCGACGGAGGA 60.289 45.455 0.00 0.00 0.00 3.71
3329 4065 2.739913 CACTTATTTTGCGACGGAGGAA 59.260 45.455 0.00 0.00 0.00 3.36
3330 4066 3.000727 ACTTATTTTGCGACGGAGGAAG 58.999 45.455 0.00 0.00 0.00 3.46
3331 4067 2.754946 TATTTTGCGACGGAGGAAGT 57.245 45.000 0.00 0.00 0.00 3.01
3332 4068 2.754946 ATTTTGCGACGGAGGAAGTA 57.245 45.000 0.00 0.00 0.00 2.24
3333 4069 1.787012 TTTTGCGACGGAGGAAGTAC 58.213 50.000 0.00 0.00 0.00 2.73
3345 4081 1.774856 AGGAAGTACAAGGCAAGGTGT 59.225 47.619 0.00 0.00 0.00 4.16
3357 4093 0.518636 CAAGGTGTCAAGACATGCGG 59.481 55.000 6.15 0.00 43.97 5.69
3366 4102 4.759693 TGTCAAGACATGCGGTTAGAAAAT 59.240 37.500 0.00 0.00 36.21 1.82
3367 4103 5.935206 TGTCAAGACATGCGGTTAGAAAATA 59.065 36.000 0.00 0.00 36.21 1.40
3370 4106 7.968405 GTCAAGACATGCGGTTAGAAAATAAAT 59.032 33.333 0.00 0.00 0.00 1.40
3371 4107 7.967854 TCAAGACATGCGGTTAGAAAATAAATG 59.032 33.333 0.00 0.00 0.00 2.32
3440 4182 5.104982 CCATTGTACATTTGGTAAGGGCATT 60.105 40.000 14.40 0.00 32.72 3.56
3443 4185 6.031751 TGTACATTTGGTAAGGGCATTTTC 57.968 37.500 0.00 0.00 32.72 2.29
3449 4191 1.613270 GTAAGGGCATTTTCAACGCG 58.387 50.000 3.53 3.53 0.00 6.01
3454 4196 1.795962 GCATTTTCAACGCGGACCG 60.796 57.895 12.47 10.29 44.21 4.79
3461 4203 4.922026 AACGCGGACCGGCAAACT 62.922 61.111 17.22 0.00 42.52 2.66
3464 4206 2.818274 GCGGACCGGCAAACTAGG 60.818 66.667 17.22 0.00 0.00 3.02
3511 4255 4.314740 GACCAGTCCATGATACTGAGAC 57.685 50.000 22.53 8.38 45.89 3.36
3524 4268 1.115467 CTGAGACGGGAGCTGGTATT 58.885 55.000 0.00 0.00 0.00 1.89
3529 4273 2.746375 CGGGAGCTGGTATTGGCCT 61.746 63.158 3.32 0.00 0.00 5.19
3531 4275 0.466372 GGGAGCTGGTATTGGCCTTC 60.466 60.000 3.32 0.00 0.00 3.46
3537 4281 2.808567 GCTGGTATTGGCCTTCTAGCTC 60.809 54.545 3.32 0.00 32.97 4.09
3541 4285 4.079787 TGGTATTGGCCTTCTAGCTCAAAT 60.080 41.667 3.32 0.00 0.00 2.32
3542 4286 4.276926 GGTATTGGCCTTCTAGCTCAAATG 59.723 45.833 3.32 0.00 0.00 2.32
3545 4289 3.873910 TGGCCTTCTAGCTCAAATGTAC 58.126 45.455 3.32 0.00 0.00 2.90
3546 4290 3.263170 TGGCCTTCTAGCTCAAATGTACA 59.737 43.478 3.32 0.00 0.00 2.90
3548 4292 4.383118 GGCCTTCTAGCTCAAATGTACAGA 60.383 45.833 0.33 0.00 0.00 3.41
3549 4293 4.568760 GCCTTCTAGCTCAAATGTACAGAC 59.431 45.833 0.33 0.00 0.00 3.51
3550 4294 4.800993 CCTTCTAGCTCAAATGTACAGACG 59.199 45.833 0.33 0.00 0.00 4.18
3595 4339 1.447838 CCATCTTGTACGTGCGGCT 60.448 57.895 0.00 0.00 0.00 5.52
3621 4365 2.668212 CGGTCGCACCACCATTGT 60.668 61.111 6.21 0.00 38.47 2.71
3626 4370 1.667830 CGCACCACCATTGTCGTCT 60.668 57.895 0.00 0.00 0.00 4.18
3631 4375 1.148310 CCACCATTGTCGTCTGTGTC 58.852 55.000 0.00 0.00 0.00 3.67
3641 4385 0.515919 CGTCTGTGTCGTCGTAGTCG 60.516 60.000 0.00 0.00 41.01 4.18
3661 4405 0.683504 TCCCTCTAGCGGTGGAAGAC 60.684 60.000 1.39 0.00 0.00 3.01
3662 4406 1.677637 CCCTCTAGCGGTGGAAGACC 61.678 65.000 1.39 0.00 42.07 3.85
3663 4407 1.677637 CCTCTAGCGGTGGAAGACCC 61.678 65.000 1.39 0.00 42.62 4.46
3682 4426 2.998097 GGGTCTGCCATGGTAGCA 59.002 61.111 23.91 9.83 38.82 3.49
3688 4432 2.098117 GTCTGCCATGGTAGCATTGTTC 59.902 50.000 23.91 5.47 40.04 3.18
3691 4435 0.381801 CCATGGTAGCATTGTTCGGC 59.618 55.000 4.25 0.00 0.00 5.54
3692 4436 0.381801 CATGGTAGCATTGTTCGGCC 59.618 55.000 4.25 0.00 0.00 6.13
3694 4438 1.448893 GGTAGCATTGTTCGGCCGA 60.449 57.895 27.28 27.28 0.00 5.54
3697 4441 0.107897 TAGCATTGTTCGGCCGATGT 60.108 50.000 31.56 16.03 0.00 3.06
3700 4444 0.374758 CATTGTTCGGCCGATGTCTG 59.625 55.000 31.56 19.86 0.00 3.51
3701 4445 1.369091 ATTGTTCGGCCGATGTCTGC 61.369 55.000 31.56 14.98 0.00 4.26
3707 4451 1.375908 GGCCGATGTCTGCTGTTCA 60.376 57.895 0.00 0.00 0.00 3.18
3709 4453 1.959899 GCCGATGTCTGCTGTTCACG 61.960 60.000 0.00 0.00 0.00 4.35
3714 4458 0.969149 TGTCTGCTGTTCACGGAGAT 59.031 50.000 0.00 0.00 0.00 2.75
3716 4460 0.247460 TCTGCTGTTCACGGAGATGG 59.753 55.000 0.00 0.00 0.00 3.51
3717 4461 0.036952 CTGCTGTTCACGGAGATGGT 60.037 55.000 0.00 0.00 0.00 3.55
3718 4462 0.320683 TGCTGTTCACGGAGATGGTG 60.321 55.000 0.00 0.00 36.74 4.17
3735 4479 1.270678 GGTGCTTAACTTCCTCACCGT 60.271 52.381 0.00 0.00 37.96 4.83
3736 4480 2.490991 GTGCTTAACTTCCTCACCGTT 58.509 47.619 0.00 0.00 0.00 4.44
3739 4483 1.459592 CTTAACTTCCTCACCGTTGCG 59.540 52.381 0.00 0.00 0.00 4.85
3794 4538 2.677875 CCTTGCCCCTGCCAAGAC 60.678 66.667 2.93 0.00 36.33 3.01
3798 4542 4.748144 GCCCCTGCCAAGACTGGG 62.748 72.222 0.00 0.00 45.87 4.45
3806 4550 1.548357 GCCAAGACTGGGAGAGCAGA 61.548 60.000 0.00 0.00 43.74 4.26
3808 4552 0.972134 CAAGACTGGGAGAGCAGACA 59.028 55.000 0.00 0.00 0.00 3.41
3809 4553 1.067000 CAAGACTGGGAGAGCAGACAG 60.067 57.143 0.00 0.00 37.01 3.51
3825 4569 2.706190 AGACAGTAAGCAACCACTCCTT 59.294 45.455 0.00 0.00 0.00 3.36
3844 4588 3.751342 CCGATCTAGGCGAGCTCA 58.249 61.111 15.40 0.00 0.00 4.26
3882 4626 4.357947 TCTCGTGGCCGTGTCTGC 62.358 66.667 0.00 0.00 35.01 4.26
3893 4637 1.301716 GTGTCTGCGGTGGTGATGT 60.302 57.895 0.00 0.00 0.00 3.06
3901 4645 2.031919 GTGGTGATGTGGCGGTCA 59.968 61.111 0.00 0.00 0.00 4.02
3919 4663 4.787280 AGGGCCTAGACAGCGGCT 62.787 66.667 2.82 0.00 45.57 5.52
3920 4664 4.228567 GGGCCTAGACAGCGGCTC 62.229 72.222 0.84 0.00 45.57 4.70
3936 4680 0.601311 GCTCTGTCTGTGGTGGTGAC 60.601 60.000 0.00 0.00 0.00 3.67
3940 4684 3.238497 TCTGTGGTGGTGACGGGG 61.238 66.667 0.00 0.00 0.00 5.73
3958 4702 3.374402 CGGTCGAGTGCCCAGAGT 61.374 66.667 0.00 0.00 0.00 3.24
3988 4732 4.340620 GTCGCTGAGGACCTAGGT 57.659 61.111 16.26 16.26 0.00 3.08
4013 4757 0.317160 TCACGTCTGACTTGGCGAAT 59.683 50.000 13.46 0.00 0.00 3.34
4014 4758 0.439985 CACGTCTGACTTGGCGAATG 59.560 55.000 6.21 0.00 0.00 2.67
4059 4803 3.246226 CAGCTCGTATAACATCTGTTGCC 59.754 47.826 5.84 0.00 38.90 4.52
4064 4808 1.668419 ATAACATCTGTTGCCTCGCC 58.332 50.000 5.84 0.00 38.90 5.54
4082 4826 3.474570 GCCTGCTCCTCCACGGAT 61.475 66.667 0.00 0.00 42.12 4.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
44 50 4.444081 CCCTCCTCCCCTCGTCGT 62.444 72.222 0.00 0.00 0.00 4.34
52 58 4.695791 AACCCCCACCCTCCTCCC 62.696 72.222 0.00 0.00 0.00 4.30
103 109 2.444895 CGCTCCTTCCCTAGGGCT 60.445 66.667 24.42 0.00 44.86 5.19
107 113 2.413765 GCGTCGCTCCTTCCCTAG 59.586 66.667 10.68 0.00 0.00 3.02
229 235 2.366916 CACTCCTTAGCTATCCCACTGG 59.633 54.545 0.00 0.00 0.00 4.00
237 243 2.022918 ACCCTGTCCACTCCTTAGCTAT 60.023 50.000 0.00 0.00 0.00 2.97
265 271 7.626487 AGGGAGTACATAGTAGGTACCAAAAAT 59.374 37.037 18.85 0.67 41.55 1.82
269 275 5.399497 GGAGGGAGTACATAGTAGGTACCAA 60.399 48.000 18.85 0.00 41.55 3.67
283 289 3.413846 AAACCGAAAAGGAGGGAGTAC 57.586 47.619 0.00 0.00 45.00 2.73
284 290 5.364735 CCTATAAACCGAAAAGGAGGGAGTA 59.635 44.000 0.00 0.00 45.00 2.59
285 291 4.163649 CCTATAAACCGAAAAGGAGGGAGT 59.836 45.833 0.00 0.00 45.00 3.85
286 292 4.444449 CCCTATAAACCGAAAAGGAGGGAG 60.444 50.000 0.00 0.00 46.86 4.30
287 293 3.457012 CCCTATAAACCGAAAAGGAGGGA 59.543 47.826 0.00 0.00 46.86 4.20
288 294 3.816994 CCCTATAAACCGAAAAGGAGGG 58.183 50.000 0.00 0.00 45.00 4.30
289 295 3.118000 AGCCCTATAAACCGAAAAGGAGG 60.118 47.826 0.00 0.00 45.00 4.30
290 296 4.152284 AGCCCTATAAACCGAAAAGGAG 57.848 45.455 0.00 0.00 45.00 3.69
291 297 4.579647 AAGCCCTATAAACCGAAAAGGA 57.420 40.909 0.00 0.00 45.00 3.36
293 299 6.990349 TGAGATAAGCCCTATAAACCGAAAAG 59.010 38.462 0.00 0.00 0.00 2.27
294 300 6.891388 TGAGATAAGCCCTATAAACCGAAAA 58.109 36.000 0.00 0.00 0.00 2.29
295 301 6.488769 TGAGATAAGCCCTATAAACCGAAA 57.511 37.500 0.00 0.00 0.00 3.46
296 302 6.488769 TTGAGATAAGCCCTATAAACCGAA 57.511 37.500 0.00 0.00 0.00 4.30
297 303 6.488769 TTTGAGATAAGCCCTATAAACCGA 57.511 37.500 0.00 0.00 0.00 4.69
298 304 7.745620 ATTTTGAGATAAGCCCTATAAACCG 57.254 36.000 0.00 0.00 0.00 4.44
306 312 9.929180 GAAAACTAAAATTTTGAGATAAGCCCT 57.071 29.630 13.76 0.00 31.90 5.19
307 313 9.151471 GGAAAACTAAAATTTTGAGATAAGCCC 57.849 33.333 13.76 1.06 31.90 5.19
308 314 9.151471 GGGAAAACTAAAATTTTGAGATAAGCC 57.849 33.333 13.76 5.57 31.90 4.35
309 315 9.705290 TGGGAAAACTAAAATTTTGAGATAAGC 57.295 29.630 13.76 0.00 31.90 3.09
330 336 9.320295 ACCAAATTGAGTCTTATAAAATGGGAA 57.680 29.630 0.00 0.00 0.00 3.97
331 337 8.893563 ACCAAATTGAGTCTTATAAAATGGGA 57.106 30.769 0.00 0.00 0.00 4.37
332 338 9.369904 CAACCAAATTGAGTCTTATAAAATGGG 57.630 33.333 0.00 0.00 41.23 4.00
333 339 9.927668 ACAACCAAATTGAGTCTTATAAAATGG 57.072 29.630 0.00 0.00 41.23 3.16
338 344 9.974980 GGAAAACAACCAAATTGAGTCTTATAA 57.025 29.630 0.00 0.00 41.23 0.98
339 345 9.137459 TGGAAAACAACCAAATTGAGTCTTATA 57.863 29.630 0.00 0.00 41.23 0.98
340 346 8.017418 TGGAAAACAACCAAATTGAGTCTTAT 57.983 30.769 0.00 0.00 41.23 1.73
341 347 7.411486 TGGAAAACAACCAAATTGAGTCTTA 57.589 32.000 0.00 0.00 41.23 2.10
342 348 6.293004 TGGAAAACAACCAAATTGAGTCTT 57.707 33.333 0.00 0.00 41.23 3.01
343 349 5.930837 TGGAAAACAACCAAATTGAGTCT 57.069 34.783 0.00 0.00 41.23 3.24
344 350 6.200854 GTGATGGAAAACAACCAAATTGAGTC 59.799 38.462 0.00 0.00 41.23 3.36
345 351 6.048509 GTGATGGAAAACAACCAAATTGAGT 58.951 36.000 0.00 0.00 41.23 3.41
346 352 6.047870 TGTGATGGAAAACAACCAAATTGAG 58.952 36.000 0.00 0.00 41.23 3.02
347 353 5.982356 TGTGATGGAAAACAACCAAATTGA 58.018 33.333 0.00 0.00 41.23 2.57
348 354 6.260493 ACATGTGATGGAAAACAACCAAATTG 59.740 34.615 0.00 0.00 40.93 2.32
349 355 6.355747 ACATGTGATGGAAAACAACCAAATT 58.644 32.000 0.00 0.00 40.93 1.82
350 356 5.927819 ACATGTGATGGAAAACAACCAAAT 58.072 33.333 0.00 0.00 40.93 2.32
351 357 5.350504 ACATGTGATGGAAAACAACCAAA 57.649 34.783 0.00 0.00 40.93 3.28
352 358 5.105187 TGAACATGTGATGGAAAACAACCAA 60.105 36.000 0.00 0.00 40.93 3.67
353 359 4.403752 TGAACATGTGATGGAAAACAACCA 59.596 37.500 0.00 0.00 41.83 3.67
354 360 4.942852 TGAACATGTGATGGAAAACAACC 58.057 39.130 0.00 0.00 33.60 3.77
355 361 6.900568 TTTGAACATGTGATGGAAAACAAC 57.099 33.333 0.00 0.00 33.60 3.32
356 362 7.226325 GGAATTTGAACATGTGATGGAAAACAA 59.774 33.333 0.00 0.00 33.60 2.83
357 363 6.705381 GGAATTTGAACATGTGATGGAAAACA 59.295 34.615 0.00 0.00 33.60 2.83
358 364 6.705381 TGGAATTTGAACATGTGATGGAAAAC 59.295 34.615 0.00 0.00 33.60 2.43
359 365 6.824553 TGGAATTTGAACATGTGATGGAAAA 58.175 32.000 0.00 0.00 33.60 2.29
360 366 6.416631 TGGAATTTGAACATGTGATGGAAA 57.583 33.333 0.00 0.00 33.60 3.13
361 367 6.416631 TTGGAATTTGAACATGTGATGGAA 57.583 33.333 0.00 0.00 33.60 3.53
362 368 5.047164 CCTTGGAATTTGAACATGTGATGGA 60.047 40.000 0.00 0.00 33.60 3.41
363 369 5.172934 CCTTGGAATTTGAACATGTGATGG 58.827 41.667 0.00 0.00 33.60 3.51
364 370 5.636121 CACCTTGGAATTTGAACATGTGATG 59.364 40.000 0.00 0.00 0.00 3.07
365 371 5.786311 CACCTTGGAATTTGAACATGTGAT 58.214 37.500 0.00 0.00 0.00 3.06
366 372 4.501229 GCACCTTGGAATTTGAACATGTGA 60.501 41.667 0.00 0.00 0.00 3.58
367 373 3.742369 GCACCTTGGAATTTGAACATGTG 59.258 43.478 0.00 0.00 0.00 3.21
368 374 3.387374 TGCACCTTGGAATTTGAACATGT 59.613 39.130 0.00 0.00 0.00 3.21
369 375 3.992643 TGCACCTTGGAATTTGAACATG 58.007 40.909 0.00 0.00 0.00 3.21
370 376 4.895668 ATGCACCTTGGAATTTGAACAT 57.104 36.364 0.00 0.00 0.00 2.71
371 377 4.686191 AATGCACCTTGGAATTTGAACA 57.314 36.364 0.00 0.00 0.00 3.18
372 378 7.489574 TTTTAATGCACCTTGGAATTTGAAC 57.510 32.000 0.00 0.00 0.00 3.18
373 379 8.566260 CAATTTTAATGCACCTTGGAATTTGAA 58.434 29.630 0.00 0.00 0.00 2.69
374 380 7.308469 GCAATTTTAATGCACCTTGGAATTTGA 60.308 33.333 0.00 0.00 43.29 2.69
375 381 6.802834 GCAATTTTAATGCACCTTGGAATTTG 59.197 34.615 0.00 0.00 43.29 2.32
376 382 6.912082 GCAATTTTAATGCACCTTGGAATTT 58.088 32.000 0.00 0.00 43.29 1.82
377 383 6.499234 GCAATTTTAATGCACCTTGGAATT 57.501 33.333 0.00 0.00 43.29 2.17
388 394 9.640974 CTTAATACTTGCATGCAATTTTAATGC 57.359 29.630 31.96 8.97 45.51 3.56
393 399 9.709495 TTTCTCTTAATACTTGCATGCAATTTT 57.291 25.926 31.96 24.68 35.20 1.82
394 400 9.709495 TTTTCTCTTAATACTTGCATGCAATTT 57.291 25.926 31.96 24.99 35.20 1.82
395 401 9.880157 ATTTTCTCTTAATACTTGCATGCAATT 57.120 25.926 31.96 27.86 35.20 2.32
396 402 9.880157 AATTTTCTCTTAATACTTGCATGCAAT 57.120 25.926 31.96 22.79 35.20 3.56
397 403 9.142515 CAATTTTCTCTTAATACTTGCATGCAA 57.857 29.630 30.12 30.12 0.00 4.08
398 404 8.522003 TCAATTTTCTCTTAATACTTGCATGCA 58.478 29.630 18.46 18.46 0.00 3.96
399 405 8.801913 GTCAATTTTCTCTTAATACTTGCATGC 58.198 33.333 11.82 11.82 0.00 4.06
400 406 9.294030 GGTCAATTTTCTCTTAATACTTGCATG 57.706 33.333 0.00 0.00 0.00 4.06
401 407 9.023962 TGGTCAATTTTCTCTTAATACTTGCAT 57.976 29.630 0.00 0.00 0.00 3.96
402 408 8.402798 TGGTCAATTTTCTCTTAATACTTGCA 57.597 30.769 0.00 0.00 0.00 4.08
403 409 9.860898 ATTGGTCAATTTTCTCTTAATACTTGC 57.139 29.630 0.00 0.00 0.00 4.01
405 411 9.860898 GCATTGGTCAATTTTCTCTTAATACTT 57.139 29.630 0.00 0.00 0.00 2.24
406 412 9.023962 TGCATTGGTCAATTTTCTCTTAATACT 57.976 29.630 0.00 0.00 0.00 2.12
407 413 9.807649 ATGCATTGGTCAATTTTCTCTTAATAC 57.192 29.630 0.00 0.00 0.00 1.89
408 414 9.806203 CATGCATTGGTCAATTTTCTCTTAATA 57.194 29.630 0.00 0.00 0.00 0.98
409 415 8.316214 ACATGCATTGGTCAATTTTCTCTTAAT 58.684 29.630 0.00 0.00 0.00 1.40
410 416 7.669427 ACATGCATTGGTCAATTTTCTCTTAA 58.331 30.769 0.00 0.00 0.00 1.85
411 417 7.230849 ACATGCATTGGTCAATTTTCTCTTA 57.769 32.000 0.00 0.00 0.00 2.10
412 418 6.105397 ACATGCATTGGTCAATTTTCTCTT 57.895 33.333 0.00 0.00 0.00 2.85
413 419 5.733620 ACATGCATTGGTCAATTTTCTCT 57.266 34.783 0.00 0.00 0.00 3.10
414 420 8.483307 AAATACATGCATTGGTCAATTTTCTC 57.517 30.769 0.00 0.00 0.00 2.87
415 421 8.851541 AAAATACATGCATTGGTCAATTTTCT 57.148 26.923 0.00 0.00 0.00 2.52
418 424 8.614346 GCATAAAATACATGCATTGGTCAATTT 58.386 29.630 0.00 0.00 46.47 1.82
419 425 8.145316 GCATAAAATACATGCATTGGTCAATT 57.855 30.769 0.00 0.00 46.47 2.32
420 426 7.718272 GCATAAAATACATGCATTGGTCAAT 57.282 32.000 0.00 0.00 46.47 2.57
482 488 9.612066 AATTAATGCTCTTGTTTTCCTCAAAAA 57.388 25.926 0.00 0.00 33.17 1.94
484 490 9.912634 CTAATTAATGCTCTTGTTTTCCTCAAA 57.087 29.630 0.00 0.00 0.00 2.69
485 491 8.522830 CCTAATTAATGCTCTTGTTTTCCTCAA 58.477 33.333 0.00 0.00 0.00 3.02
486 492 7.669722 ACCTAATTAATGCTCTTGTTTTCCTCA 59.330 33.333 0.00 0.00 0.00 3.86
487 493 7.970614 CACCTAATTAATGCTCTTGTTTTCCTC 59.029 37.037 0.00 0.00 0.00 3.71
488 494 7.577616 GCACCTAATTAATGCTCTTGTTTTCCT 60.578 37.037 12.17 0.00 36.40 3.36
489 495 6.531594 GCACCTAATTAATGCTCTTGTTTTCC 59.468 38.462 12.17 0.00 36.40 3.13
490 496 7.315890 AGCACCTAATTAATGCTCTTGTTTTC 58.684 34.615 15.10 0.00 46.68 2.29
491 497 7.232118 AGCACCTAATTAATGCTCTTGTTTT 57.768 32.000 15.10 0.00 46.68 2.43
492 498 6.840780 AGCACCTAATTAATGCTCTTGTTT 57.159 33.333 15.10 0.00 46.68 2.83
500 506 6.479095 TTTGCAAAAGCACCTAATTAATGC 57.521 33.333 10.02 11.70 39.74 3.56
501 507 8.086851 AGTTTTGCAAAAGCACCTAATTAATG 57.913 30.769 24.46 0.00 0.00 1.90
502 508 9.203421 GTAGTTTTGCAAAAGCACCTAATTAAT 57.797 29.630 24.46 1.22 0.00 1.40
503 509 8.198109 TGTAGTTTTGCAAAAGCACCTAATTAA 58.802 29.630 24.46 5.50 0.00 1.40
504 510 7.717568 TGTAGTTTTGCAAAAGCACCTAATTA 58.282 30.769 24.46 9.48 0.00 1.40
505 511 6.578023 TGTAGTTTTGCAAAAGCACCTAATT 58.422 32.000 24.46 0.86 0.00 1.40
506 512 6.155475 TGTAGTTTTGCAAAAGCACCTAAT 57.845 33.333 24.46 3.96 0.00 1.73
507 513 5.584253 TGTAGTTTTGCAAAAGCACCTAA 57.416 34.783 24.46 10.16 0.00 2.69
508 514 5.584253 TTGTAGTTTTGCAAAAGCACCTA 57.416 34.783 24.46 17.93 0.00 3.08
509 515 4.464069 TTGTAGTTTTGCAAAAGCACCT 57.536 36.364 24.46 18.89 0.00 4.00
510 516 5.538067 TTTTGTAGTTTTGCAAAAGCACC 57.462 34.783 24.46 12.86 41.78 5.01
511 517 6.598525 ACTTTTTGTAGTTTTGCAAAAGCAC 58.401 32.000 24.46 22.38 45.37 4.40
512 518 6.793492 ACTTTTTGTAGTTTTGCAAAAGCA 57.207 29.167 24.46 19.13 45.37 3.91
513 519 9.420966 GAATACTTTTTGTAGTTTTGCAAAAGC 57.579 29.630 24.46 17.94 45.37 3.51
514 520 9.914923 GGAATACTTTTTGTAGTTTTGCAAAAG 57.085 29.630 24.46 11.93 45.37 2.27
515 521 9.436957 TGGAATACTTTTTGTAGTTTTGCAAAA 57.563 25.926 20.46 20.46 43.89 2.44
516 522 8.874816 GTGGAATACTTTTTGTAGTTTTGCAAA 58.125 29.630 8.05 8.05 38.42 3.68
517 523 7.492994 GGTGGAATACTTTTTGTAGTTTTGCAA 59.507 33.333 0.00 0.00 38.42 4.08
518 524 6.981559 GGTGGAATACTTTTTGTAGTTTTGCA 59.018 34.615 0.00 0.00 35.97 4.08
519 525 6.981559 TGGTGGAATACTTTTTGTAGTTTTGC 59.018 34.615 0.00 0.00 34.24 3.68
520 526 8.194769 AGTGGTGGAATACTTTTTGTAGTTTTG 58.805 33.333 0.00 0.00 34.24 2.44
521 527 8.301252 AGTGGTGGAATACTTTTTGTAGTTTT 57.699 30.769 0.00 0.00 34.24 2.43
522 528 7.558444 TGAGTGGTGGAATACTTTTTGTAGTTT 59.442 33.333 0.00 0.00 34.24 2.66
523 529 7.012989 GTGAGTGGTGGAATACTTTTTGTAGTT 59.987 37.037 0.00 0.00 34.24 2.24
524 530 6.485648 GTGAGTGGTGGAATACTTTTTGTAGT 59.514 38.462 0.00 0.00 34.24 2.73
525 531 6.072673 GGTGAGTGGTGGAATACTTTTTGTAG 60.073 42.308 0.00 0.00 34.24 2.74
526 532 5.766174 GGTGAGTGGTGGAATACTTTTTGTA 59.234 40.000 0.00 0.00 35.37 2.41
527 533 4.583073 GGTGAGTGGTGGAATACTTTTTGT 59.417 41.667 0.00 0.00 0.00 2.83
528 534 4.582656 TGGTGAGTGGTGGAATACTTTTTG 59.417 41.667 0.00 0.00 0.00 2.44
529 535 4.798882 TGGTGAGTGGTGGAATACTTTTT 58.201 39.130 0.00 0.00 0.00 1.94
530 536 4.447138 TGGTGAGTGGTGGAATACTTTT 57.553 40.909 0.00 0.00 0.00 2.27
531 537 4.289672 AGATGGTGAGTGGTGGAATACTTT 59.710 41.667 0.00 0.00 0.00 2.66
532 538 3.846588 AGATGGTGAGTGGTGGAATACTT 59.153 43.478 0.00 0.00 0.00 2.24
533 539 3.454858 AGATGGTGAGTGGTGGAATACT 58.545 45.455 0.00 0.00 0.00 2.12
534 540 3.914426 AGATGGTGAGTGGTGGAATAC 57.086 47.619 0.00 0.00 0.00 1.89
535 541 3.709653 GGTAGATGGTGAGTGGTGGAATA 59.290 47.826 0.00 0.00 0.00 1.75
536 542 2.505819 GGTAGATGGTGAGTGGTGGAAT 59.494 50.000 0.00 0.00 0.00 3.01
537 543 1.906574 GGTAGATGGTGAGTGGTGGAA 59.093 52.381 0.00 0.00 0.00 3.53
538 544 1.078823 AGGTAGATGGTGAGTGGTGGA 59.921 52.381 0.00 0.00 0.00 4.02
539 545 1.573108 AGGTAGATGGTGAGTGGTGG 58.427 55.000 0.00 0.00 0.00 4.61
540 546 2.567169 TCAAGGTAGATGGTGAGTGGTG 59.433 50.000 0.00 0.00 0.00 4.17
541 547 2.902608 TCAAGGTAGATGGTGAGTGGT 58.097 47.619 0.00 0.00 0.00 4.16
542 548 4.194640 CAATCAAGGTAGATGGTGAGTGG 58.805 47.826 0.00 0.00 33.61 4.00
543 549 4.194640 CCAATCAAGGTAGATGGTGAGTG 58.805 47.826 0.00 0.00 36.21 3.51
544 550 3.846588 ACCAATCAAGGTAGATGGTGAGT 59.153 43.478 0.00 0.00 40.98 3.41
545 551 4.080919 TCACCAATCAAGGTAGATGGTGAG 60.081 45.833 19.00 0.00 43.33 3.51
546 552 3.843619 TCACCAATCAAGGTAGATGGTGA 59.156 43.478 19.00 19.00 44.47 4.02
547 553 4.080919 TCTCACCAATCAAGGTAGATGGTG 60.081 45.833 15.28 15.28 40.77 4.17
548 554 4.104086 TCTCACCAATCAAGGTAGATGGT 58.896 43.478 0.00 0.00 40.77 3.55
549 555 4.760530 TCTCACCAATCAAGGTAGATGG 57.239 45.455 0.00 0.00 40.77 3.51
550 556 7.636150 AAAATCTCACCAATCAAGGTAGATG 57.364 36.000 0.00 0.00 40.77 2.90
551 557 7.890127 TCAAAAATCTCACCAATCAAGGTAGAT 59.110 33.333 0.00 0.00 40.77 1.98
552 558 7.230747 TCAAAAATCTCACCAATCAAGGTAGA 58.769 34.615 0.00 0.00 40.77 2.59
553 559 7.452880 TCAAAAATCTCACCAATCAAGGTAG 57.547 36.000 0.00 0.00 40.77 3.18
554 560 7.831691 TTCAAAAATCTCACCAATCAAGGTA 57.168 32.000 0.00 0.00 40.77 3.08
555 561 6.729690 TTCAAAAATCTCACCAATCAAGGT 57.270 33.333 0.00 0.00 44.48 3.50
556 562 7.874016 TCAATTCAAAAATCTCACCAATCAAGG 59.126 33.333 0.00 0.00 0.00 3.61
557 563 8.821147 TCAATTCAAAAATCTCACCAATCAAG 57.179 30.769 0.00 0.00 0.00 3.02
558 564 7.385752 GCTCAATTCAAAAATCTCACCAATCAA 59.614 33.333 0.00 0.00 0.00 2.57
559 565 6.869913 GCTCAATTCAAAAATCTCACCAATCA 59.130 34.615 0.00 0.00 0.00 2.57
560 566 6.312180 GGCTCAATTCAAAAATCTCACCAATC 59.688 38.462 0.00 0.00 0.00 2.67
561 567 6.168389 GGCTCAATTCAAAAATCTCACCAAT 58.832 36.000 0.00 0.00 0.00 3.16
562 568 5.070180 TGGCTCAATTCAAAAATCTCACCAA 59.930 36.000 0.00 0.00 0.00 3.67
563 569 4.588106 TGGCTCAATTCAAAAATCTCACCA 59.412 37.500 0.00 0.00 0.00 4.17
564 570 5.138125 TGGCTCAATTCAAAAATCTCACC 57.862 39.130 0.00 0.00 0.00 4.02
568 574 9.822185 GGTTTATATGGCTCAATTCAAAAATCT 57.178 29.630 0.00 0.00 0.00 2.40
569 575 8.755018 CGGTTTATATGGCTCAATTCAAAAATC 58.245 33.333 0.00 0.00 0.00 2.17
570 576 8.474025 TCGGTTTATATGGCTCAATTCAAAAAT 58.526 29.630 0.00 0.00 0.00 1.82
571 577 7.831753 TCGGTTTATATGGCTCAATTCAAAAA 58.168 30.769 0.00 0.00 0.00 1.94
572 578 7.397892 TCGGTTTATATGGCTCAATTCAAAA 57.602 32.000 0.00 0.00 0.00 2.44
573 579 7.397892 TTCGGTTTATATGGCTCAATTCAAA 57.602 32.000 0.00 0.00 0.00 2.69
574 580 7.397892 TTTCGGTTTATATGGCTCAATTCAA 57.602 32.000 0.00 0.00 0.00 2.69
575 581 7.397892 TTTTCGGTTTATATGGCTCAATTCA 57.602 32.000 0.00 0.00 0.00 2.57
576 582 7.435192 CCTTTTTCGGTTTATATGGCTCAATTC 59.565 37.037 0.00 0.00 0.00 2.17
577 583 7.264947 CCTTTTTCGGTTTATATGGCTCAATT 58.735 34.615 0.00 0.00 0.00 2.32
578 584 6.183360 CCCTTTTTCGGTTTATATGGCTCAAT 60.183 38.462 0.00 0.00 0.00 2.57
579 585 5.126384 CCCTTTTTCGGTTTATATGGCTCAA 59.874 40.000 0.00 0.00 0.00 3.02
580 586 4.642885 CCCTTTTTCGGTTTATATGGCTCA 59.357 41.667 0.00 0.00 0.00 4.26
581 587 4.037565 CCCCTTTTTCGGTTTATATGGCTC 59.962 45.833 0.00 0.00 0.00 4.70
582 588 3.958147 CCCCTTTTTCGGTTTATATGGCT 59.042 43.478 0.00 0.00 0.00 4.75
583 589 3.069016 CCCCCTTTTTCGGTTTATATGGC 59.931 47.826 0.00 0.00 0.00 4.40
584 590 4.538738 TCCCCCTTTTTCGGTTTATATGG 58.461 43.478 0.00 0.00 0.00 2.74
585 591 5.198207 ACTCCCCCTTTTTCGGTTTATATG 58.802 41.667 0.00 0.00 0.00 1.78
586 592 5.461516 ACTCCCCCTTTTTCGGTTTATAT 57.538 39.130 0.00 0.00 0.00 0.86
587 593 4.932911 ACTCCCCCTTTTTCGGTTTATA 57.067 40.909 0.00 0.00 0.00 0.98
588 594 3.820195 ACTCCCCCTTTTTCGGTTTAT 57.180 42.857 0.00 0.00 0.00 1.40
589 595 3.559811 GCTACTCCCCCTTTTTCGGTTTA 60.560 47.826 0.00 0.00 0.00 2.01
590 596 2.816712 GCTACTCCCCCTTTTTCGGTTT 60.817 50.000 0.00 0.00 0.00 3.27
591 597 1.271762 GCTACTCCCCCTTTTTCGGTT 60.272 52.381 0.00 0.00 0.00 4.44
592 598 0.327259 GCTACTCCCCCTTTTTCGGT 59.673 55.000 0.00 0.00 0.00 4.69
593 599 0.326927 TGCTACTCCCCCTTTTTCGG 59.673 55.000 0.00 0.00 0.00 4.30
594 600 1.450025 GTGCTACTCCCCCTTTTTCG 58.550 55.000 0.00 0.00 0.00 3.46
595 601 1.835494 GGTGCTACTCCCCCTTTTTC 58.165 55.000 0.00 0.00 0.00 2.29
596 602 0.037734 CGGTGCTACTCCCCCTTTTT 59.962 55.000 0.00 0.00 0.00 1.94
597 603 0.838987 TCGGTGCTACTCCCCCTTTT 60.839 55.000 0.00 0.00 0.00 2.27
598 604 0.838987 TTCGGTGCTACTCCCCCTTT 60.839 55.000 0.00 0.00 0.00 3.11
599 605 1.229400 TTCGGTGCTACTCCCCCTT 60.229 57.895 0.00 0.00 0.00 3.95
600 606 1.686110 CTTCGGTGCTACTCCCCCT 60.686 63.158 0.00 0.00 0.00 4.79
601 607 1.049289 ATCTTCGGTGCTACTCCCCC 61.049 60.000 0.00 0.00 0.00 5.40
602 608 0.105039 CATCTTCGGTGCTACTCCCC 59.895 60.000 0.00 0.00 0.00 4.81
603 609 0.824759 ACATCTTCGGTGCTACTCCC 59.175 55.000 0.00 0.00 0.00 4.30
604 610 1.476891 TCACATCTTCGGTGCTACTCC 59.523 52.381 0.00 0.00 36.22 3.85
605 611 2.941453 TCACATCTTCGGTGCTACTC 57.059 50.000 0.00 0.00 36.22 2.59
606 612 3.895232 ATTCACATCTTCGGTGCTACT 57.105 42.857 0.00 0.00 36.22 2.57
634 640 1.073763 TGGGTCAAGATGGTCCAACAG 59.926 52.381 0.00 0.00 0.00 3.16
637 643 2.557229 CCAATGGGTCAAGATGGTCCAA 60.557 50.000 0.00 0.00 0.00 3.53
654 660 2.990967 CGGTGTTGCCAGCCCAAT 60.991 61.111 0.00 0.00 35.65 3.16
665 671 3.181471 TGTTGATGGATTTTTGCGGTGTT 60.181 39.130 0.00 0.00 0.00 3.32
673 679 6.368516 CGCAAGGTTAATGTTGATGGATTTTT 59.631 34.615 4.40 0.00 0.00 1.94
721 727 7.345691 TCTGCATTAATGGAATAGAAGTGGAA 58.654 34.615 17.02 0.00 0.00 3.53
722 728 6.899089 TCTGCATTAATGGAATAGAAGTGGA 58.101 36.000 17.02 2.07 0.00 4.02
723 729 6.206243 CCTCTGCATTAATGGAATAGAAGTGG 59.794 42.308 17.02 7.72 0.00 4.00
724 730 6.994496 TCCTCTGCATTAATGGAATAGAAGTG 59.006 38.462 17.02 0.38 0.00 3.16
725 731 7.141758 TCCTCTGCATTAATGGAATAGAAGT 57.858 36.000 17.02 0.00 0.00 3.01
726 732 7.040823 GGTTCCTCTGCATTAATGGAATAGAAG 60.041 40.741 17.02 2.83 38.77 2.85
727 733 6.772716 GGTTCCTCTGCATTAATGGAATAGAA 59.227 38.462 17.02 12.69 38.77 2.10
728 734 6.299141 GGTTCCTCTGCATTAATGGAATAGA 58.701 40.000 17.02 7.30 38.77 1.98
729 735 5.180117 CGGTTCCTCTGCATTAATGGAATAG 59.820 44.000 17.02 13.20 38.77 1.73
730 736 5.063204 CGGTTCCTCTGCATTAATGGAATA 58.937 41.667 17.02 4.76 38.77 1.75
731 737 3.885297 CGGTTCCTCTGCATTAATGGAAT 59.115 43.478 17.02 0.00 38.77 3.01
797 814 3.199289 AGGTCAGATCTGTCATTGCATCA 59.801 43.478 21.92 0.00 0.00 3.07
806 823 4.493547 CAACTCTCAAGGTCAGATCTGTC 58.506 47.826 21.92 16.39 0.00 3.51
809 826 2.235898 GGCAACTCTCAAGGTCAGATCT 59.764 50.000 0.00 0.00 0.00 2.75
823 840 6.792422 ACACTAGTGTAAGGGTAGGCAACTC 61.792 48.000 26.91 0.00 43.60 3.01
829 846 3.836562 ACCAACACTAGTGTAAGGGTAGG 59.163 47.826 33.49 24.68 44.13 3.18
848 865 2.465860 AATTACACTAGCGCACACCA 57.534 45.000 11.47 0.00 0.00 4.17
965 982 4.751431 GGCTCTGAATTGCCCAGT 57.249 55.556 0.00 0.00 43.11 4.00
977 994 2.685380 CGTCCCCTCCAAGGCTCT 60.685 66.667 0.00 0.00 32.73 4.09
983 1000 1.080354 ATCCTGTCGTCCCCTCCAA 59.920 57.895 0.00 0.00 0.00 3.53
986 1003 2.501610 GCATCCTGTCGTCCCCTC 59.498 66.667 0.00 0.00 0.00 4.30
991 1008 4.530857 CCCCGGCATCCTGTCGTC 62.531 72.222 0.00 0.00 45.14 4.20
1070 1087 0.629596 ATCAGACGTACCTGGAGGGA 59.370 55.000 0.00 0.00 40.27 4.20
1075 1092 1.743958 ACGAGAATCAGACGTACCTGG 59.256 52.381 4.59 0.00 38.47 4.45
1082 1099 2.678836 ACTCCTACACGAGAATCAGACG 59.321 50.000 0.00 0.00 33.83 4.18
1085 1102 4.082190 TCCAAACTCCTACACGAGAATCAG 60.082 45.833 0.00 0.00 33.83 2.90
1089 1106 3.640029 ACTTCCAAACTCCTACACGAGAA 59.360 43.478 0.00 0.00 33.83 2.87
1093 1110 2.036733 TCCACTTCCAAACTCCTACACG 59.963 50.000 0.00 0.00 0.00 4.49
1123 1140 8.611757 TCTCTTTTTAAAAGGCAAATGAAAAGC 58.388 29.630 16.21 0.00 34.39 3.51
1143 1160 8.980481 TTCTTACAGATCCACTTTTTCTCTTT 57.020 30.769 0.00 0.00 0.00 2.52
1151 1174 6.542821 TGGACAATTCTTACAGATCCACTTT 58.457 36.000 0.00 0.00 27.84 2.66
1198 1222 8.581057 ACATAATCTGCTTGTTCTACGATAAG 57.419 34.615 0.00 0.00 0.00 1.73
1224 1248 5.503498 TCGTTCAAATCAAAACGTGGTAAG 58.497 37.500 7.41 0.00 46.21 2.34
1225 1249 5.481200 TCGTTCAAATCAAAACGTGGTAA 57.519 34.783 7.41 0.00 46.21 2.85
1229 1253 5.263185 AGACTTCGTTCAAATCAAAACGTG 58.737 37.500 7.41 5.16 46.21 4.49
1234 1258 7.553881 AAGAGAAGACTTCGTTCAAATCAAA 57.446 32.000 9.53 0.00 34.02 2.69
1245 1269 6.037610 CCCCAAATTCATAAGAGAAGACTTCG 59.962 42.308 9.53 0.00 34.02 3.79
1264 1288 9.460413 TCCTTCTCTAATAAATCTATCCCCAAA 57.540 33.333 0.00 0.00 0.00 3.28
1266 1290 7.181125 GCTCCTTCTCTAATAAATCTATCCCCA 59.819 40.741 0.00 0.00 0.00 4.96
1268 1292 8.140112 TGCTCCTTCTCTAATAAATCTATCCC 57.860 38.462 0.00 0.00 0.00 3.85
1269 1293 9.030452 TCTGCTCCTTCTCTAATAAATCTATCC 57.970 37.037 0.00 0.00 0.00 2.59
1299 1331 9.902196 AAAAAGATACAAATACCCTACAAAACG 57.098 29.630 0.00 0.00 0.00 3.60
1320 1367 4.400529 AAGGGGCCGCATATTTAAAAAG 57.599 40.909 23.39 0.00 0.00 2.27
1356 1403 9.103048 CGACAAATCCGTTATAATTTTGATAGC 57.897 33.333 14.65 0.00 32.88 2.97
1388 1435 6.127647 ACGAAACCTTAACTACACCGATATGA 60.128 38.462 0.00 0.00 0.00 2.15
1422 1469 7.560991 TCTGGATATGCAACTTTTTCCATGTAT 59.439 33.333 0.00 0.00 33.10 2.29
1423 1470 6.889177 TCTGGATATGCAACTTTTTCCATGTA 59.111 34.615 0.00 0.00 33.10 2.29
1426 1473 6.812998 CATCTGGATATGCAACTTTTTCCAT 58.187 36.000 0.00 0.00 33.10 3.41
1427 1474 6.211587 CATCTGGATATGCAACTTTTTCCA 57.788 37.500 0.00 0.00 0.00 3.53
1443 1520 1.596934 GTGGAACTCGGCATCTGGA 59.403 57.895 0.00 0.00 0.00 3.86
1471 1548 7.122650 AGGTTCAGAAAAGTGAAGAACATTCAA 59.877 33.333 0.00 0.00 40.11 2.69
1475 1552 7.410120 AAAGGTTCAGAAAAGTGAAGAACAT 57.590 32.000 0.00 0.00 40.11 2.71
1476 1553 6.834168 AAAGGTTCAGAAAAGTGAAGAACA 57.166 33.333 0.00 0.00 40.11 3.18
1499 1576 3.810310 AAAGTGAATCACCCGCAAAAA 57.190 38.095 10.12 0.00 34.49 1.94
1500 1577 3.383185 AGAAAAGTGAATCACCCGCAAAA 59.617 39.130 10.12 0.00 34.49 2.44
1501 1578 2.955660 AGAAAAGTGAATCACCCGCAAA 59.044 40.909 10.12 0.00 34.49 3.68
1502 1579 2.293122 CAGAAAAGTGAATCACCCGCAA 59.707 45.455 10.12 0.00 34.49 4.85
1503 1580 1.879380 CAGAAAAGTGAATCACCCGCA 59.121 47.619 10.12 0.00 34.49 5.69
1504 1581 2.151202 TCAGAAAAGTGAATCACCCGC 58.849 47.619 10.12 0.00 34.49 6.13
1505 1582 3.815401 AGTTCAGAAAAGTGAATCACCCG 59.185 43.478 10.12 0.00 38.68 5.28
1506 1583 5.774498 AAGTTCAGAAAAGTGAATCACCC 57.226 39.130 10.12 0.00 38.68 4.61
1612 1692 8.725148 GGATACATCAGTTATCCTTATGCAAAG 58.275 37.037 0.00 0.00 37.39 2.77
1683 1763 4.516291 TGGGAGTACCACTGTAAACAGCA 61.516 47.826 10.01 0.00 46.80 4.41
1705 1785 8.795842 TGTAAATCTATGTAAATCCAAACGGT 57.204 30.769 0.00 0.00 0.00 4.83
1722 1802 9.860898 GACAAATCAAATAAGCCTTGTAAATCT 57.139 29.630 0.00 0.00 0.00 2.40
2206 2916 4.111577 AGTTGGTGATCCCCAAGAATCTA 58.888 43.478 10.20 0.00 44.92 1.98
2353 3066 4.284550 ACGTTGGCCTGCACCCAT 62.285 61.111 3.32 0.00 31.26 4.00
2461 3174 1.683790 CGTCGTTGAGGTTCCGCATC 61.684 60.000 0.00 0.00 0.00 3.91
2581 3294 2.112087 TAGGGCTGCGCAAACACA 59.888 55.556 19.22 0.00 0.00 3.72
2918 3631 2.106074 GCGCCACATGGTCGATCAA 61.106 57.895 0.60 0.00 37.05 2.57
2975 3688 1.262950 CTCGTTGAACATGGCGAACAA 59.737 47.619 0.00 0.00 32.84 2.83
3070 3783 5.301805 CCTAGGGGATGTTTATGCGAATTTT 59.698 40.000 0.00 0.00 33.58 1.82
3081 3794 2.270874 CTGCCGCCTAGGGGATGTTT 62.271 60.000 26.66 0.00 41.48 2.83
3116 3836 1.337354 CCACCAAATTAAACCCACGCC 60.337 52.381 0.00 0.00 0.00 5.68
3140 3860 6.238456 CCACACACACGCATCAATCTAATTAT 60.238 38.462 0.00 0.00 0.00 1.28
3205 3929 9.088987 ACACATACAAGTCTTTATTTTTCCCAT 57.911 29.630 0.00 0.00 0.00 4.00
3221 3945 3.003275 ACAAAGCCACGAACACATACAAG 59.997 43.478 0.00 0.00 0.00 3.16
3226 3950 0.030638 GCACAAAGCCACGAACACAT 59.969 50.000 0.00 0.00 37.23 3.21
3246 3978 4.941263 TGAAAGCAACGGAACAAGCTATAT 59.059 37.500 0.00 0.00 36.07 0.86
3247 3979 4.320023 TGAAAGCAACGGAACAAGCTATA 58.680 39.130 0.00 0.00 36.07 1.31
3269 4005 0.905357 GAGTACATGCCACAGGGACT 59.095 55.000 0.00 0.00 42.32 3.85
3301 4037 4.973663 CCGTCGCAAAATAAGTGTCTTTTT 59.026 37.500 0.00 0.00 0.00 1.94
3302 4038 4.273969 TCCGTCGCAAAATAAGTGTCTTTT 59.726 37.500 0.00 0.00 0.00 2.27
3303 4039 3.810941 TCCGTCGCAAAATAAGTGTCTTT 59.189 39.130 0.00 0.00 0.00 2.52
3304 4040 3.395639 TCCGTCGCAAAATAAGTGTCTT 58.604 40.909 0.00 0.00 0.00 3.01
3305 4041 2.993899 CTCCGTCGCAAAATAAGTGTCT 59.006 45.455 0.00 0.00 0.00 3.41
3306 4042 2.093783 CCTCCGTCGCAAAATAAGTGTC 59.906 50.000 0.00 0.00 0.00 3.67
3307 4043 2.073816 CCTCCGTCGCAAAATAAGTGT 58.926 47.619 0.00 0.00 0.00 3.55
3308 4044 2.343101 TCCTCCGTCGCAAAATAAGTG 58.657 47.619 0.00 0.00 0.00 3.16
3309 4045 2.754946 TCCTCCGTCGCAAAATAAGT 57.245 45.000 0.00 0.00 0.00 2.24
3310 4046 3.000727 ACTTCCTCCGTCGCAAAATAAG 58.999 45.455 0.00 0.00 0.00 1.73
3311 4047 3.048337 ACTTCCTCCGTCGCAAAATAA 57.952 42.857 0.00 0.00 0.00 1.40
3312 4048 2.754946 ACTTCCTCCGTCGCAAAATA 57.245 45.000 0.00 0.00 0.00 1.40
3313 4049 2.289195 TGTACTTCCTCCGTCGCAAAAT 60.289 45.455 0.00 0.00 0.00 1.82
3314 4050 1.068895 TGTACTTCCTCCGTCGCAAAA 59.931 47.619 0.00 0.00 0.00 2.44
3315 4051 0.675083 TGTACTTCCTCCGTCGCAAA 59.325 50.000 0.00 0.00 0.00 3.68
3316 4052 0.675083 TTGTACTTCCTCCGTCGCAA 59.325 50.000 0.00 0.00 0.00 4.85
3317 4053 0.242825 CTTGTACTTCCTCCGTCGCA 59.757 55.000 0.00 0.00 0.00 5.10
3318 4054 0.458025 CCTTGTACTTCCTCCGTCGC 60.458 60.000 0.00 0.00 0.00 5.19
3319 4055 0.458025 GCCTTGTACTTCCTCCGTCG 60.458 60.000 0.00 0.00 0.00 5.12
3320 4056 0.606604 TGCCTTGTACTTCCTCCGTC 59.393 55.000 0.00 0.00 0.00 4.79
3321 4057 1.002087 CTTGCCTTGTACTTCCTCCGT 59.998 52.381 0.00 0.00 0.00 4.69
3322 4058 1.676014 CCTTGCCTTGTACTTCCTCCG 60.676 57.143 0.00 0.00 0.00 4.63
3323 4059 1.351350 ACCTTGCCTTGTACTTCCTCC 59.649 52.381 0.00 0.00 0.00 4.30
3324 4060 2.224548 ACACCTTGCCTTGTACTTCCTC 60.225 50.000 0.00 0.00 0.00 3.71
3325 4061 1.774856 ACACCTTGCCTTGTACTTCCT 59.225 47.619 0.00 0.00 0.00 3.36
3326 4062 2.152016 GACACCTTGCCTTGTACTTCC 58.848 52.381 0.00 0.00 0.00 3.46
3327 4063 2.846193 TGACACCTTGCCTTGTACTTC 58.154 47.619 0.00 0.00 0.00 3.01
3328 4064 3.118038 TCTTGACACCTTGCCTTGTACTT 60.118 43.478 0.00 0.00 0.00 2.24
3329 4065 2.438021 TCTTGACACCTTGCCTTGTACT 59.562 45.455 0.00 0.00 0.00 2.73
3330 4066 2.548480 GTCTTGACACCTTGCCTTGTAC 59.452 50.000 0.00 0.00 0.00 2.90
3331 4067 2.171659 TGTCTTGACACCTTGCCTTGTA 59.828 45.455 0.00 0.00 0.00 2.41
3332 4068 1.064758 TGTCTTGACACCTTGCCTTGT 60.065 47.619 0.00 0.00 0.00 3.16
3333 4069 1.679139 TGTCTTGACACCTTGCCTTG 58.321 50.000 0.00 0.00 0.00 3.61
3345 4081 7.441890 TTTATTTTCTAACCGCATGTCTTGA 57.558 32.000 0.00 0.00 0.00 3.02
3380 4121 1.383523 AAGAAGGATGGCGCTAAAGC 58.616 50.000 7.64 0.00 37.78 3.51
3384 4125 0.821517 TCGAAAGAAGGATGGCGCTA 59.178 50.000 7.64 0.00 37.03 4.26
3417 4159 5.596836 ATGCCCTTACCAAATGTACAATG 57.403 39.130 0.00 2.08 0.00 2.82
3440 4182 4.912485 TGCCGGTCCGCGTTGAAA 62.912 61.111 5.50 0.00 0.00 2.69
3443 4185 4.676586 GTTTGCCGGTCCGCGTTG 62.677 66.667 5.50 0.00 0.00 4.10
3449 4191 2.437895 GGCCTAGTTTGCCGGTCC 60.438 66.667 1.90 0.00 39.48 4.46
3461 4203 2.185867 GCGAACGGATGTGGCCTA 59.814 61.111 3.32 0.00 0.00 3.93
3492 4236 2.035193 CCGTCTCAGTATCATGGACTGG 59.965 54.545 21.38 14.88 43.76 4.00
3497 4241 1.000283 GCTCCCGTCTCAGTATCATGG 60.000 57.143 0.00 0.00 0.00 3.66
3503 4247 0.622136 TACCAGCTCCCGTCTCAGTA 59.378 55.000 0.00 0.00 0.00 2.74
3511 4255 2.203209 GGCCAATACCAGCTCCCG 60.203 66.667 0.00 0.00 0.00 5.14
3524 4268 3.263170 TGTACATTTGAGCTAGAAGGCCA 59.737 43.478 5.01 0.00 0.00 5.36
3529 4273 5.638596 TCGTCTGTACATTTGAGCTAGAA 57.361 39.130 0.00 0.00 0.00 2.10
3531 4275 6.706055 TTTTCGTCTGTACATTTGAGCTAG 57.294 37.500 0.00 0.00 0.00 3.42
3564 4308 2.036217 ACAAGATGGTCGTTCGGTACAA 59.964 45.455 0.00 0.00 0.00 2.41
3607 4351 1.666553 GACGACAATGGTGGTGCGA 60.667 57.895 0.00 0.00 35.99 5.10
3608 4352 1.667830 AGACGACAATGGTGGTGCG 60.668 57.895 0.00 0.00 35.99 5.34
3621 4365 0.786581 GACTACGACGACACAGACGA 59.213 55.000 0.00 0.00 33.85 4.20
3626 4370 1.568612 GGGACGACTACGACGACACA 61.569 60.000 0.00 0.00 42.66 3.72
3631 4375 1.207390 CTAGAGGGACGACTACGACG 58.793 60.000 0.00 0.00 42.66 5.12
3641 4385 0.683504 TCTTCCACCGCTAGAGGGAC 60.684 60.000 17.53 0.00 35.02 4.46
3662 4406 3.087253 TACCATGGCAGACCCGGG 61.087 66.667 22.25 22.25 36.87 5.73
3663 4407 2.505982 CTACCATGGCAGACCCGG 59.494 66.667 13.04 0.00 35.87 5.73
3670 4414 1.093972 CGAACAATGCTACCATGGCA 58.906 50.000 13.04 4.34 44.05 4.92
3675 4419 1.743623 CGGCCGAACAATGCTACCA 60.744 57.895 24.07 0.00 0.00 3.25
3682 4426 1.369091 GCAGACATCGGCCGAACAAT 61.369 55.000 34.66 17.80 0.00 2.71
3688 4432 2.434884 AACAGCAGACATCGGCCG 60.435 61.111 22.12 22.12 37.79 6.13
3691 4435 1.354337 CCGTGAACAGCAGACATCGG 61.354 60.000 0.00 0.00 0.00 4.18
3692 4436 0.388520 TCCGTGAACAGCAGACATCG 60.389 55.000 0.00 0.00 0.00 3.84
3694 4438 0.969149 TCTCCGTGAACAGCAGACAT 59.031 50.000 0.00 0.00 0.00 3.06
3697 4441 0.247460 CCATCTCCGTGAACAGCAGA 59.753 55.000 0.00 0.00 0.00 4.26
3700 4444 1.639298 GCACCATCTCCGTGAACAGC 61.639 60.000 0.00 0.00 32.77 4.40
3701 4445 0.036952 AGCACCATCTCCGTGAACAG 60.037 55.000 0.00 0.00 32.77 3.16
3707 4451 2.354805 GGAAGTTAAGCACCATCTCCGT 60.355 50.000 0.00 0.00 0.00 4.69
3709 4453 3.055094 TGAGGAAGTTAAGCACCATCTCC 60.055 47.826 0.00 0.00 0.00 3.71
3714 4458 2.561478 GGTGAGGAAGTTAAGCACCA 57.439 50.000 12.95 0.00 46.27 4.17
3716 4460 2.165319 ACGGTGAGGAAGTTAAGCAC 57.835 50.000 0.00 0.00 0.00 4.40
3717 4461 2.489971 CAACGGTGAGGAAGTTAAGCA 58.510 47.619 0.00 0.00 0.00 3.91
3718 4462 1.197036 GCAACGGTGAGGAAGTTAAGC 59.803 52.381 3.55 0.00 0.00 3.09
3783 4527 1.908340 CTCTCCCAGTCTTGGCAGGG 61.908 65.000 2.38 2.38 43.58 4.45
3785 4529 1.078567 GCTCTCCCAGTCTTGGCAG 60.079 63.158 0.00 0.00 43.58 4.85
3791 4535 0.114168 ACTGTCTGCTCTCCCAGTCT 59.886 55.000 0.00 0.00 32.97 3.24
3792 4536 1.840737 TACTGTCTGCTCTCCCAGTC 58.159 55.000 0.00 0.00 38.91 3.51
3794 4538 1.134848 GCTTACTGTCTGCTCTCCCAG 60.135 57.143 0.00 0.00 0.00 4.45
3798 4542 2.289072 TGGTTGCTTACTGTCTGCTCTC 60.289 50.000 6.52 0.00 0.00 3.20
3799 4543 1.694150 TGGTTGCTTACTGTCTGCTCT 59.306 47.619 6.52 0.00 0.00 4.09
3806 4550 2.851195 CAAGGAGTGGTTGCTTACTGT 58.149 47.619 0.00 0.00 34.95 3.55
3808 4552 1.897560 GCAAGGAGTGGTTGCTTACT 58.102 50.000 0.58 0.00 45.67 2.24
3865 4609 4.357947 GCAGACACGGCCACGAGA 62.358 66.667 2.24 0.00 44.60 4.04
3882 4626 4.697756 ACCGCCACATCACCACCG 62.698 66.667 0.00 0.00 0.00 4.94
3897 4641 1.222113 GCTGTCTAGGCCCTTGACC 59.778 63.158 20.35 4.63 35.88 4.02
3919 4663 1.739667 CGTCACCACCACAGACAGA 59.260 57.895 0.00 0.00 32.68 3.41
3920 4664 1.300931 CCGTCACCACCACAGACAG 60.301 63.158 0.00 0.00 32.68 3.51
3975 4719 2.482333 CGCCGACCTAGGTCCTCAG 61.482 68.421 31.78 19.40 41.76 3.35
4038 4782 3.133003 AGGCAACAGATGTTATACGAGCT 59.867 43.478 0.00 0.00 36.32 4.09
4043 4787 2.544267 GGCGAGGCAACAGATGTTATAC 59.456 50.000 0.00 0.00 36.32 1.47
4046 4790 0.739462 CGGCGAGGCAACAGATGTTA 60.739 55.000 0.00 0.00 36.32 2.41
4048 4792 2.434884 CGGCGAGGCAACAGATGT 60.435 61.111 0.00 0.00 41.41 3.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.