Multiple sequence alignment - TraesCS3B01G529800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G529800 chr3B 100.000 6809 0 0 1 6809 771189490 771196298 0.000000e+00 12574.0
1 TraesCS3B01G529800 chr3B 97.220 1043 23 1 5773 6809 825685389 825684347 0.000000e+00 1760.0
2 TraesCS3B01G529800 chr3B 97.124 1043 24 1 5773 6809 700823488 700822446 0.000000e+00 1755.0
3 TraesCS3B01G529800 chr3B 97.124 1043 24 1 5773 6809 754499004 754497962 0.000000e+00 1755.0
4 TraesCS3B01G529800 chr3B 96.149 779 30 0 4995 5773 771252624 771253402 0.000000e+00 1273.0
5 TraesCS3B01G529800 chr3B 85.522 891 52 25 240 1108 771249163 771249998 0.000000e+00 859.0
6 TraesCS3B01G529800 chr3B 82.805 884 69 35 215 1092 770957015 770956209 0.000000e+00 713.0
7 TraesCS3B01G529800 chr3B 84.261 737 96 12 3835 4559 770955017 770954289 0.000000e+00 701.0
8 TraesCS3B01G529800 chr3B 77.277 1109 191 28 1769 2872 390455383 390456435 4.550000e-166 595.0
9 TraesCS3B01G529800 chr3B 92.749 331 24 0 5443 5773 770953536 770953206 4.780000e-131 479.0
10 TraesCS3B01G529800 chr3B 80.527 493 73 13 3835 4320 771250746 771251222 2.340000e-94 357.0
11 TraesCS3B01G529800 chr3B 85.312 320 45 2 5449 5767 773542558 773542876 5.090000e-86 329.0
12 TraesCS3B01G529800 chr3B 81.609 348 62 2 5426 5773 770691528 770691873 3.110000e-73 287.0
13 TraesCS3B01G529800 chr3B 86.441 236 25 3 4324 4559 771251694 771251922 1.130000e-62 252.0
14 TraesCS3B01G529800 chr3B 90.857 175 5 1 5152 5315 770953862 770953688 2.470000e-54 224.0
15 TraesCS3B01G529800 chr3B 80.252 238 29 6 3059 3280 771250480 771250715 5.460000e-36 163.0
16 TraesCS3B01G529800 chr3B 94.949 99 2 3 4827 4923 771252510 771252607 1.180000e-32 152.0
17 TraesCS3B01G529800 chr3B 80.455 220 23 7 3059 3265 770955279 770955067 4.250000e-32 150.0
18 TraesCS3B01G529800 chr3B 89.286 56 5 1 4815 4870 770953953 770953899 1.230000e-07 69.4
19 TraesCS3B01G529800 chr2B 97.225 1045 23 1 5771 6809 762951980 762950936 0.000000e+00 1764.0
20 TraesCS3B01G529800 chr2B 77.361 879 157 26 1931 2804 620889672 620890513 3.690000e-132 483.0
21 TraesCS3B01G529800 chr2B 76.434 645 122 18 1769 2408 748694123 748693504 8.520000e-84 322.0
22 TraesCS3B01G529800 chr2B 84.848 66 9 1 3769 3834 496960745 496960809 1.590000e-06 65.8
23 TraesCS3B01G529800 chrUn 97.220 1043 23 1 5773 6809 370480820 370481862 0.000000e+00 1760.0
24 TraesCS3B01G529800 chrUn 97.129 1045 24 1 5771 6809 41877738 41876694 0.000000e+00 1759.0
25 TraesCS3B01G529800 chrUn 97.033 1045 25 1 5771 6809 3040240 3041284 0.000000e+00 1753.0
26 TraesCS3B01G529800 chr4A 97.220 1043 23 1 5773 6809 698155254 698154212 0.000000e+00 1760.0
27 TraesCS3B01G529800 chr4A 82.727 110 16 3 3916 4022 643145859 643145968 2.020000e-15 95.3
28 TraesCS3B01G529800 chr5B 97.220 1043 22 2 5773 6809 527114324 527113283 0.000000e+00 1759.0
29 TraesCS3B01G529800 chr5B 76.085 1083 196 35 1816 2887 657402714 657401684 2.190000e-139 507.0
30 TraesCS3B01G529800 chr5B 77.019 161 33 4 3864 4022 488121090 488121248 9.410000e-14 89.8
31 TraesCS3B01G529800 chr5B 78.505 107 19 3 1498 1601 28270156 28270051 4.410000e-07 67.6
32 TraesCS3B01G529800 chr3D 83.924 1412 173 30 3267 4647 578050213 578051601 0.000000e+00 1301.0
33 TraesCS3B01G529800 chr3D 88.475 833 40 12 4995 5773 578052291 578053121 0.000000e+00 955.0
34 TraesCS3B01G529800 chr3D 86.234 879 60 29 252 1108 577662096 577661257 0.000000e+00 896.0
35 TraesCS3B01G529800 chr3D 85.749 835 52 31 4995 5773 577658483 577657660 0.000000e+00 821.0
36 TraesCS3B01G529800 chr3D 84.930 710 56 21 224 929 578048366 578049028 0.000000e+00 671.0
37 TraesCS3B01G529800 chr3D 76.352 1091 196 30 1769 2854 336542596 336543629 4.680000e-146 529.0
38 TraesCS3B01G529800 chr3D 83.243 370 31 19 4650 4997 577658891 577658531 1.840000e-80 311.0
39 TraesCS3B01G529800 chr3D 83.200 375 28 7 4650 4996 578051645 578052012 1.840000e-80 311.0
40 TraesCS3B01G529800 chr3D 88.672 256 20 3 4332 4584 577659215 577658966 3.090000e-78 303.0
41 TraesCS3B01G529800 chr3D 89.444 180 18 1 1 180 578047860 578048038 6.870000e-55 226.0
42 TraesCS3B01G529800 chr3D 84.536 194 23 5 3097 3284 578050005 578050197 1.170000e-42 185.0
43 TraesCS3B01G529800 chr3D 92.105 114 8 1 1 113 577662204 577662091 7.070000e-35 159.0
44 TraesCS3B01G529800 chr3D 88.608 79 8 1 2947 3025 578049892 578049969 2.020000e-15 95.3
45 TraesCS3B01G529800 chr1A 80.622 1094 181 19 1792 2867 20907161 20906081 0.000000e+00 817.0
46 TraesCS3B01G529800 chr1A 78.187 706 128 17 2173 2871 497591463 497590777 1.750000e-115 427.0
47 TraesCS3B01G529800 chr1A 76.712 146 31 3 3864 4007 490503862 490503718 2.040000e-10 78.7
48 TraesCS3B01G529800 chr7D 81.038 1002 161 14 1793 2788 241738918 241737940 0.000000e+00 771.0
49 TraesCS3B01G529800 chr7D 76.658 1221 240 28 1649 2853 614517341 614516150 9.630000e-178 634.0
50 TraesCS3B01G529800 chr2A 77.810 1050 194 26 1780 2823 670320469 670321485 4.510000e-171 612.0
51 TraesCS3B01G529800 chr2A 76.965 1107 186 36 1773 2868 566206885 566205837 9.910000e-158 568.0
52 TraesCS3B01G529800 chr2A 76.991 791 134 28 2139 2919 540450137 540450889 6.360000e-110 409.0
53 TraesCS3B01G529800 chr7B 79.070 860 140 21 2026 2875 517606417 517607246 7.720000e-154 555.0
54 TraesCS3B01G529800 chr7B 79.241 395 66 11 2533 2919 139098916 139099302 1.880000e-65 261.0
55 TraesCS3B01G529800 chr3A 83.333 564 46 17 198 759 713220458 713219941 1.720000e-130 477.0
56 TraesCS3B01G529800 chr3A 90.196 306 23 7 4342 4646 713217413 713217114 6.400000e-105 392.0
57 TraesCS3B01G529800 chr3A 87.541 305 27 7 5041 5336 713216445 713216143 6.540000e-90 342.0
58 TraesCS3B01G529800 chr3A 92.391 184 13 1 4 187 713220774 713220592 1.880000e-65 261.0
59 TraesCS3B01G529800 chr3A 91.935 186 11 4 4815 4997 713216708 713216524 2.440000e-64 257.0
60 TraesCS3B01G529800 chr3A 78.182 330 44 18 1185 1502 713219132 713218819 1.170000e-42 185.0
61 TraesCS3B01G529800 chr7A 83.573 347 49 5 2529 2870 169017912 169018255 1.100000e-82 318.0
62 TraesCS3B01G529800 chr5A 78.936 451 91 4 2415 2862 704859368 704859817 3.090000e-78 303.0
63 TraesCS3B01G529800 chr1B 80.702 399 67 9 2476 2868 680168163 680168557 1.110000e-77 302.0
64 TraesCS3B01G529800 chr1B 79.037 353 65 6 2040 2392 83850830 83850487 4.110000e-57 233.0
65 TraesCS3B01G529800 chr1B 73.333 465 109 15 3864 4321 636688258 636688714 2.540000e-34 158.0
66 TraesCS3B01G529800 chr4B 82.583 333 49 8 2529 2854 649545099 649544769 1.120000e-72 285.0
67 TraesCS3B01G529800 chr1D 81.295 278 41 6 2281 2551 126536432 126536159 1.490000e-51 215.0
68 TraesCS3B01G529800 chr1D 82.645 121 21 0 3616 3736 375971086 375971206 2.600000e-19 108.0
69 TraesCS3B01G529800 chr1D 80.851 94 12 5 3744 3835 7418767 7418856 1.230000e-07 69.4
70 TraesCS3B01G529800 chr6B 72.632 475 113 17 3857 4323 433075119 433074654 2.560000e-29 141.0
71 TraesCS3B01G529800 chr2D 73.846 325 66 17 3864 4178 575693130 575693445 2.010000e-20 111.0
72 TraesCS3B01G529800 chr2D 75.635 197 35 9 3648 3834 524562411 524562218 1.220000e-12 86.1
73 TraesCS3B01G529800 chr2D 80.435 92 16 2 3744 3834 423552854 423552944 1.230000e-07 69.4
74 TraesCS3B01G529800 chr5D 77.027 148 21 9 3864 4009 406986093 406985957 9.470000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G529800 chr3B 771189490 771196298 6808 False 12574.000000 12574 100.000000 1 6809 1 chr3B.!!$F3 6808
1 TraesCS3B01G529800 chr3B 825684347 825685389 1042 True 1760.000000 1760 97.220000 5773 6809 1 chr3B.!!$R3 1036
2 TraesCS3B01G529800 chr3B 700822446 700823488 1042 True 1755.000000 1755 97.124000 5773 6809 1 chr3B.!!$R1 1036
3 TraesCS3B01G529800 chr3B 754497962 754499004 1042 True 1755.000000 1755 97.124000 5773 6809 1 chr3B.!!$R2 1036
4 TraesCS3B01G529800 chr3B 390455383 390456435 1052 False 595.000000 595 77.277000 1769 2872 1 chr3B.!!$F1 1103
5 TraesCS3B01G529800 chr3B 771249163 771253402 4239 False 509.333333 1273 87.306667 240 5773 6 chr3B.!!$F5 5533
6 TraesCS3B01G529800 chr3B 770953206 770957015 3809 True 389.400000 713 86.735500 215 5773 6 chr3B.!!$R4 5558
7 TraesCS3B01G529800 chr2B 762950936 762951980 1044 True 1764.000000 1764 97.225000 5771 6809 1 chr2B.!!$R2 1038
8 TraesCS3B01G529800 chr2B 620889672 620890513 841 False 483.000000 483 77.361000 1931 2804 1 chr2B.!!$F2 873
9 TraesCS3B01G529800 chr2B 748693504 748694123 619 True 322.000000 322 76.434000 1769 2408 1 chr2B.!!$R1 639
10 TraesCS3B01G529800 chrUn 370480820 370481862 1042 False 1760.000000 1760 97.220000 5773 6809 1 chrUn.!!$F2 1036
11 TraesCS3B01G529800 chrUn 41876694 41877738 1044 True 1759.000000 1759 97.129000 5771 6809 1 chrUn.!!$R1 1038
12 TraesCS3B01G529800 chrUn 3040240 3041284 1044 False 1753.000000 1753 97.033000 5771 6809 1 chrUn.!!$F1 1038
13 TraesCS3B01G529800 chr4A 698154212 698155254 1042 True 1760.000000 1760 97.220000 5773 6809 1 chr4A.!!$R1 1036
14 TraesCS3B01G529800 chr5B 527113283 527114324 1041 True 1759.000000 1759 97.220000 5773 6809 1 chr5B.!!$R2 1036
15 TraesCS3B01G529800 chr5B 657401684 657402714 1030 True 507.000000 507 76.085000 1816 2887 1 chr5B.!!$R3 1071
16 TraesCS3B01G529800 chr3D 578047860 578053121 5261 False 534.900000 1301 86.159571 1 5773 7 chr3D.!!$F2 5772
17 TraesCS3B01G529800 chr3D 336542596 336543629 1033 False 529.000000 529 76.352000 1769 2854 1 chr3D.!!$F1 1085
18 TraesCS3B01G529800 chr3D 577657660 577662204 4544 True 498.000000 896 87.200600 1 5773 5 chr3D.!!$R1 5772
19 TraesCS3B01G529800 chr1A 20906081 20907161 1080 True 817.000000 817 80.622000 1792 2867 1 chr1A.!!$R1 1075
20 TraesCS3B01G529800 chr1A 497590777 497591463 686 True 427.000000 427 78.187000 2173 2871 1 chr1A.!!$R3 698
21 TraesCS3B01G529800 chr7D 241737940 241738918 978 True 771.000000 771 81.038000 1793 2788 1 chr7D.!!$R1 995
22 TraesCS3B01G529800 chr7D 614516150 614517341 1191 True 634.000000 634 76.658000 1649 2853 1 chr7D.!!$R2 1204
23 TraesCS3B01G529800 chr2A 670320469 670321485 1016 False 612.000000 612 77.810000 1780 2823 1 chr2A.!!$F2 1043
24 TraesCS3B01G529800 chr2A 566205837 566206885 1048 True 568.000000 568 76.965000 1773 2868 1 chr2A.!!$R1 1095
25 TraesCS3B01G529800 chr2A 540450137 540450889 752 False 409.000000 409 76.991000 2139 2919 1 chr2A.!!$F1 780
26 TraesCS3B01G529800 chr7B 517606417 517607246 829 False 555.000000 555 79.070000 2026 2875 1 chr7B.!!$F2 849
27 TraesCS3B01G529800 chr3A 713216143 713220774 4631 True 319.000000 477 87.263000 4 5336 6 chr3A.!!$R1 5332

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
156 157 0.028505 GCAGCGAACGTCCTACGATA 59.971 55.0 6.44 0.00 46.05 2.92 F
351 643 0.037605 AGGCGGTTTAAGAGTCCACG 60.038 55.0 0.00 0.00 0.00 4.94 F
1624 2661 0.035036 TGGTTGTTCGGCGTCCATTA 59.965 50.0 6.85 0.00 0.00 1.90 F
1744 2781 0.038159 CCGTTCAGTCCACTCCACTC 60.038 60.0 0.00 0.00 0.00 3.51 F
3568 4762 0.178935 CCCCCAAACCAATGTCCACT 60.179 55.0 0.00 0.00 0.00 4.00 F
3706 4909 0.107831 TATATTGTGGGGTCGCCTGC 59.892 55.0 7.55 1.17 0.00 4.85 F
3779 5003 0.179179 GCGAGTTCCTTGCTTCATGC 60.179 55.0 0.00 0.00 37.84 4.06 F
3780 5004 0.449388 CGAGTTCCTTGCTTCATGCC 59.551 55.0 0.00 0.00 42.00 4.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1605 2642 0.035036 TAATGGACGCCGAACAACCA 59.965 50.000 0.00 0.00 35.09 3.67 R
1725 2762 0.038159 GAGTGGAGTGGACTGAACGG 60.038 60.000 0.00 0.00 0.00 4.44 R
3560 4754 0.105593 CTGCAGCCGATAGTGGACAT 59.894 55.000 0.00 0.00 0.00 3.06 R
3618 4812 0.234884 GTGCAGGTTCGTCGGAAAAG 59.765 55.000 0.00 0.00 33.05 2.27 R
5085 8106 1.070275 GGGAAGGTCGACACGGTTT 59.930 57.895 18.91 3.16 0.00 3.27 R
5233 8261 2.042464 TGGCATCGCTTAGAAGGATCT 58.958 47.619 0.00 0.00 39.82 2.75 R
5729 8827 2.280524 CGACCTTGTTGCCCACGA 60.281 61.111 0.00 0.00 0.00 4.35 R
5812 8910 2.550606 GTGCCGATTCTGTTACAAACCA 59.449 45.455 0.00 0.00 0.00 3.67 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 4.284123 GGCAGAACATCTGTCGCA 57.716 55.556 8.97 0.00 45.94 5.10
63 64 3.189606 TGGACATTGTTGGTAGGAGGAT 58.810 45.455 0.00 0.00 0.00 3.24
71 72 1.996798 TGGTAGGAGGATGGACGATC 58.003 55.000 0.00 0.00 0.00 3.69
124 125 1.258445 CGTAGTCCAAGGAGGCAGGT 61.258 60.000 0.00 0.00 37.29 4.00
152 153 1.805945 CAGGCAGCGAACGTCCTAC 60.806 63.158 0.00 0.00 0.00 3.18
156 157 0.028505 GCAGCGAACGTCCTACGATA 59.971 55.000 6.44 0.00 46.05 2.92
180 183 1.153349 GGAGCGGCTGGAAAGGTAG 60.153 63.158 7.50 0.00 0.00 3.18
187 190 1.675116 GGCTGGAAAGGTAGAACGACC 60.675 57.143 0.00 0.00 40.08 4.79
188 191 1.675116 GCTGGAAAGGTAGAACGACCC 60.675 57.143 0.00 0.00 40.74 4.46
190 193 0.978907 GGAAAGGTAGAACGACCCCA 59.021 55.000 0.00 0.00 40.74 4.96
191 194 1.348696 GGAAAGGTAGAACGACCCCAA 59.651 52.381 0.00 0.00 40.74 4.12
193 196 3.560668 GGAAAGGTAGAACGACCCCAATT 60.561 47.826 0.00 0.00 40.74 2.32
194 197 3.801307 AAGGTAGAACGACCCCAATTT 57.199 42.857 0.00 0.00 40.74 1.82
195 198 3.067684 AGGTAGAACGACCCCAATTTG 57.932 47.619 0.00 0.00 40.74 2.32
206 332 0.321346 CCCAATTTGCCTCCCACAAC 59.679 55.000 0.00 0.00 0.00 3.32
208 334 0.321346 CAATTTGCCTCCCACAACCC 59.679 55.000 0.00 0.00 0.00 4.11
233 524 2.845345 CCCACCCCAGTTTGCCTCT 61.845 63.158 0.00 0.00 0.00 3.69
243 534 1.064017 AGTTTGCCTCTGGTTTGTGGA 60.064 47.619 0.00 0.00 0.00 4.02
250 541 3.572255 GCCTCTGGTTTGTGGATAAACAA 59.428 43.478 0.00 0.00 41.23 2.83
351 643 0.037605 AGGCGGTTTAAGAGTCCACG 60.038 55.000 0.00 0.00 0.00 4.94
355 647 2.746269 CGGTTTAAGAGTCCACGTTGA 58.254 47.619 0.00 0.00 0.00 3.18
387 679 7.120579 TCTCAAGTATTTCACCATTTGCGTAAT 59.879 33.333 0.00 0.00 0.00 1.89
391 683 3.485947 TTCACCATTTGCGTAATCTGC 57.514 42.857 0.00 0.00 0.00 4.26
392 684 1.742831 TCACCATTTGCGTAATCTGCC 59.257 47.619 0.00 0.00 0.00 4.85
393 685 1.472082 CACCATTTGCGTAATCTGCCA 59.528 47.619 0.00 0.00 0.00 4.92
394 686 2.099592 CACCATTTGCGTAATCTGCCAT 59.900 45.455 0.00 0.00 0.00 4.40
395 687 2.760092 ACCATTTGCGTAATCTGCCATT 59.240 40.909 0.00 0.00 0.00 3.16
396 688 3.195396 ACCATTTGCGTAATCTGCCATTT 59.805 39.130 0.00 0.00 0.00 2.32
397 689 3.552699 CCATTTGCGTAATCTGCCATTTG 59.447 43.478 0.00 0.00 0.00 2.32
398 690 2.276472 TTGCGTAATCTGCCATTTGC 57.724 45.000 0.00 0.00 41.77 3.68
399 691 0.098552 TGCGTAATCTGCCATTTGCG 59.901 50.000 0.00 0.00 45.60 4.85
400 692 0.098728 GCGTAATCTGCCATTTGCGT 59.901 50.000 0.00 0.00 45.60 5.24
401 693 1.329292 GCGTAATCTGCCATTTGCGTA 59.671 47.619 0.00 0.00 45.60 4.42
402 694 2.223157 GCGTAATCTGCCATTTGCGTAA 60.223 45.455 0.00 0.00 45.60 3.18
403 695 3.350912 CGTAATCTGCCATTTGCGTAAC 58.649 45.455 0.00 0.00 45.60 2.50
404 696 2.939460 AATCTGCCATTTGCGTAACC 57.061 45.000 0.00 0.00 45.60 2.85
405 697 2.128771 ATCTGCCATTTGCGTAACCT 57.871 45.000 0.00 0.00 45.60 3.50
406 698 1.164411 TCTGCCATTTGCGTAACCTG 58.836 50.000 0.00 0.00 45.60 4.00
412 704 0.679960 ATTTGCGTAACCTGGAGGGC 60.680 55.000 0.00 0.00 40.27 5.19
465 757 4.533815 ACTCGGTGGAATATAGTCACTCA 58.466 43.478 2.18 0.00 0.00 3.41
490 782 8.430063 CACTTCAGAACAAATGCAAAATGATAC 58.570 33.333 0.00 0.00 0.00 2.24
491 783 8.143193 ACTTCAGAACAAATGCAAAATGATACA 58.857 29.630 0.00 0.00 0.00 2.29
549 845 7.472543 GCGAACAAACCATATATGAAAAGTCT 58.527 34.615 14.54 0.00 0.00 3.24
681 990 1.227380 GGGCCGTGCACATAGAGAG 60.227 63.158 18.64 0.00 0.00 3.20
682 991 1.227380 GGCCGTGCACATAGAGAGG 60.227 63.158 18.64 8.99 0.00 3.69
683 992 1.517832 GCCGTGCACATAGAGAGGT 59.482 57.895 18.64 0.00 0.00 3.85
684 993 0.807667 GCCGTGCACATAGAGAGGTG 60.808 60.000 18.64 0.00 40.39 4.00
685 994 0.179100 CCGTGCACATAGAGAGGTGG 60.179 60.000 18.64 1.39 37.83 4.61
686 995 0.817654 CGTGCACATAGAGAGGTGGA 59.182 55.000 18.64 0.00 37.83 4.02
687 996 1.410517 CGTGCACATAGAGAGGTGGAT 59.589 52.381 18.64 0.00 39.94 3.41
688 997 2.544694 CGTGCACATAGAGAGGTGGATC 60.545 54.545 18.64 0.00 39.94 3.36
689 998 1.683385 TGCACATAGAGAGGTGGATCG 59.317 52.381 0.00 0.00 37.83 3.69
690 999 1.957177 GCACATAGAGAGGTGGATCGA 59.043 52.381 0.00 0.00 37.83 3.59
695 1004 0.322636 AGAGAGGTGGATCGACACGT 60.323 55.000 10.22 3.75 42.23 4.49
708 1017 4.662961 CACGTGCCAGCTGACCGA 62.663 66.667 17.39 0.00 0.00 4.69
709 1018 3.695606 ACGTGCCAGCTGACCGAT 61.696 61.111 17.39 2.61 0.00 4.18
710 1019 2.887568 CGTGCCAGCTGACCGATC 60.888 66.667 17.39 0.00 0.00 3.69
711 1020 2.265739 GTGCCAGCTGACCGATCA 59.734 61.111 17.39 0.01 0.00 2.92
811 1127 3.004315 CGGCTTTCTCTGATCCTCTCTAC 59.996 52.174 0.00 0.00 0.00 2.59
813 1129 5.381757 GGCTTTCTCTGATCCTCTCTACTA 58.618 45.833 0.00 0.00 0.00 1.82
815 1131 6.493458 GGCTTTCTCTGATCCTCTCTACTATT 59.507 42.308 0.00 0.00 0.00 1.73
873 1193 7.321153 TCAGGTACTTCTTGTTACTTGCTATC 58.679 38.462 0.00 0.00 34.60 2.08
875 1195 8.467598 CAGGTACTTCTTGTTACTTGCTATCTA 58.532 37.037 0.00 0.00 34.60 1.98
876 1196 8.468399 AGGTACTTCTTGTTACTTGCTATCTAC 58.532 37.037 0.00 0.00 27.25 2.59
887 1207 9.261180 GTTACTTGCTATCTACATATTTCAGCA 57.739 33.333 0.00 0.00 35.87 4.41
943 1293 6.564099 AGAGAGAAGACCTGGATCATATCAT 58.436 40.000 0.00 0.00 0.00 2.45
990 1340 1.156645 CGCAAGGCATAGCTGGAGTC 61.157 60.000 0.00 0.00 0.00 3.36
1012 1362 2.034170 GCTTCTTCTATGCTTTCGCTCG 60.034 50.000 0.00 0.00 36.97 5.03
1093 1988 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1095 1990 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1096 1991 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1097 1992 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1098 1993 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1100 1995 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1101 1996 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1102 1997 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1103 1998 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1107 2002 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1109 2004 5.462240 TCTCTCTCTCTCTCTCTCTCTCAT 58.538 45.833 0.00 0.00 0.00 2.90
1116 2081 7.397476 TCTCTCTCTCTCTCTCTCATATAGGAC 59.603 44.444 0.00 0.00 0.00 3.85
1141 2106 6.152932 ACCTTGCACATTGATTATTCATCC 57.847 37.500 0.00 0.00 0.00 3.51
1152 2117 9.772973 CATTGATTATTCATCCCAAATTGACAT 57.227 29.630 0.00 0.00 0.00 3.06
1169 2166 8.864069 AATTGACATACTCGAGAGTAATTCTG 57.136 34.615 21.68 12.01 45.87 3.02
1170 2167 6.378710 TGACATACTCGAGAGTAATTCTGG 57.621 41.667 21.68 5.77 45.87 3.86
1173 2170 1.757699 ACTCGAGAGTAATTCTGGGCC 59.242 52.381 21.68 0.00 40.43 5.80
1174 2171 2.035632 CTCGAGAGTAATTCTGGGCCT 58.964 52.381 6.58 0.00 35.87 5.19
1202 2200 4.365899 TCTCTTGATTCATGCATGCAAC 57.634 40.909 26.68 10.78 0.00 4.17
1205 2203 3.449377 TCTTGATTCATGCATGCAACCAT 59.551 39.130 26.68 16.04 0.00 3.55
1206 2204 3.897141 TGATTCATGCATGCAACCATT 57.103 38.095 26.68 4.34 0.00 3.16
1207 2205 4.209307 TGATTCATGCATGCAACCATTT 57.791 36.364 26.68 3.45 0.00 2.32
1296 2295 2.058829 AAAAAGCACACGCCTCCACG 62.059 55.000 0.00 0.00 39.83 4.94
1300 2299 2.125713 CACACGCCTCCACGCATA 60.126 61.111 0.00 0.00 36.19 3.14
1301 2300 1.521457 CACACGCCTCCACGCATAT 60.521 57.895 0.00 0.00 36.19 1.78
1302 2301 0.249280 CACACGCCTCCACGCATATA 60.249 55.000 0.00 0.00 36.19 0.86
1303 2302 0.679505 ACACGCCTCCACGCATATAT 59.320 50.000 0.00 0.00 36.19 0.86
1352 2388 3.321968 TCCACTTGATATCCAGTGATCCG 59.678 47.826 29.44 17.13 34.50 4.18
1366 2403 1.134699 TGATCCGAAAGCTGCGAGAAT 60.135 47.619 10.48 2.16 0.00 2.40
1402 2439 0.693049 TGCTTCCTCTCTTTGTCCCC 59.307 55.000 0.00 0.00 0.00 4.81
1405 2442 2.260822 CTTCCTCTCTTTGTCCCCTGA 58.739 52.381 0.00 0.00 0.00 3.86
1406 2443 1.944177 TCCTCTCTTTGTCCCCTGAG 58.056 55.000 0.00 0.00 0.00 3.35
1413 2450 1.005215 CTTTGTCCCCTGAGCCAAGAT 59.995 52.381 0.00 0.00 0.00 2.40
1493 2530 5.535783 TGAATGTGACATGGTTTCAGTCAAT 59.464 36.000 0.00 0.00 43.16 2.57
1494 2531 6.040729 TGAATGTGACATGGTTTCAGTCAATT 59.959 34.615 0.00 0.00 43.16 2.32
1502 2539 6.942005 ACATGGTTTCAGTCAATTGTCTCATA 59.058 34.615 5.13 0.00 0.00 2.15
1503 2540 7.120285 ACATGGTTTCAGTCAATTGTCTCATAG 59.880 37.037 5.13 3.42 0.00 2.23
1504 2541 5.412594 TGGTTTCAGTCAATTGTCTCATAGC 59.587 40.000 5.13 0.00 0.00 2.97
1505 2542 5.412594 GGTTTCAGTCAATTGTCTCATAGCA 59.587 40.000 5.13 0.00 0.00 3.49
1506 2543 6.094603 GGTTTCAGTCAATTGTCTCATAGCAT 59.905 38.462 5.13 0.00 0.00 3.79
1507 2544 6.915544 TTCAGTCAATTGTCTCATAGCATC 57.084 37.500 5.13 0.00 0.00 3.91
1508 2545 6.231258 TCAGTCAATTGTCTCATAGCATCT 57.769 37.500 5.13 0.00 0.00 2.90
1509 2546 7.352079 TCAGTCAATTGTCTCATAGCATCTA 57.648 36.000 5.13 0.00 0.00 1.98
1510 2547 7.205992 TCAGTCAATTGTCTCATAGCATCTAC 58.794 38.462 5.13 0.00 0.00 2.59
1511 2548 6.982724 CAGTCAATTGTCTCATAGCATCTACA 59.017 38.462 5.13 0.00 0.00 2.74
1512 2549 7.169476 CAGTCAATTGTCTCATAGCATCTACAG 59.831 40.741 5.13 0.00 0.00 2.74
1513 2550 5.987953 TCAATTGTCTCATAGCATCTACAGC 59.012 40.000 5.13 0.00 0.00 4.40
1514 2551 4.327982 TTGTCTCATAGCATCTACAGCC 57.672 45.455 0.00 0.00 0.00 4.85
1515 2552 2.294512 TGTCTCATAGCATCTACAGCCG 59.705 50.000 0.00 0.00 0.00 5.52
1516 2553 1.889170 TCTCATAGCATCTACAGCCGG 59.111 52.381 0.00 0.00 0.00 6.13
1517 2554 1.889170 CTCATAGCATCTACAGCCGGA 59.111 52.381 5.05 0.00 0.00 5.14
1518 2555 2.495270 CTCATAGCATCTACAGCCGGAT 59.505 50.000 5.05 0.00 0.00 4.18
1519 2556 2.232208 TCATAGCATCTACAGCCGGATG 59.768 50.000 20.26 20.26 41.36 3.51
1520 2557 1.704641 TAGCATCTACAGCCGGATGT 58.295 50.000 30.40 30.40 40.76 3.06
1521 2558 0.833287 AGCATCTACAGCCGGATGTT 59.167 50.000 32.77 10.73 40.76 2.71
1522 2559 1.210478 AGCATCTACAGCCGGATGTTT 59.790 47.619 32.77 13.71 40.76 2.83
1523 2560 1.599542 GCATCTACAGCCGGATGTTTC 59.400 52.381 32.77 11.78 40.76 2.78
1524 2561 2.905075 CATCTACAGCCGGATGTTTCA 58.095 47.619 32.77 15.45 35.82 2.69
1525 2562 3.270027 CATCTACAGCCGGATGTTTCAA 58.730 45.455 32.77 12.20 35.82 2.69
1526 2563 3.410631 TCTACAGCCGGATGTTTCAAA 57.589 42.857 32.77 11.77 34.56 2.69
1527 2564 3.071479 TCTACAGCCGGATGTTTCAAAC 58.929 45.455 32.77 0.00 34.56 2.93
1528 2565 0.958822 ACAGCCGGATGTTTCAAACC 59.041 50.000 22.02 0.00 0.00 3.27
1529 2566 0.243636 CAGCCGGATGTTTCAAACCC 59.756 55.000 12.68 0.00 0.00 4.11
1530 2567 1.211709 GCCGGATGTTTCAAACCCG 59.788 57.895 5.05 10.18 39.85 5.28
1531 2568 1.520600 GCCGGATGTTTCAAACCCGT 61.521 55.000 5.05 0.00 38.61 5.28
1532 2569 0.519961 CCGGATGTTTCAAACCCGTC 59.480 55.000 14.54 3.77 38.61 4.79
1533 2570 1.519408 CGGATGTTTCAAACCCGTCT 58.481 50.000 9.20 0.00 35.83 4.18
1534 2571 1.463444 CGGATGTTTCAAACCCGTCTC 59.537 52.381 9.20 0.00 35.83 3.36
1535 2572 2.500229 GGATGTTTCAAACCCGTCTCA 58.500 47.619 0.00 0.00 0.00 3.27
1536 2573 2.882137 GGATGTTTCAAACCCGTCTCAA 59.118 45.455 0.00 0.00 0.00 3.02
1537 2574 3.316868 GGATGTTTCAAACCCGTCTCAAA 59.683 43.478 0.00 0.00 0.00 2.69
1538 2575 3.768468 TGTTTCAAACCCGTCTCAAAC 57.232 42.857 0.00 0.00 0.00 2.93
1558 2595 2.915659 CCGGCGGGCTGACCTATA 60.916 66.667 20.56 0.00 36.97 1.31
1559 2596 2.504274 CCGGCGGGCTGACCTATAA 61.504 63.158 20.56 0.00 36.97 0.98
1560 2597 1.006102 CGGCGGGCTGACCTATAAG 60.006 63.158 0.00 0.00 36.97 1.73
1561 2598 1.745320 CGGCGGGCTGACCTATAAGT 61.745 60.000 0.00 0.00 36.97 2.24
1562 2599 0.249911 GGCGGGCTGACCTATAAGTG 60.250 60.000 0.00 0.00 36.97 3.16
1563 2600 0.750850 GCGGGCTGACCTATAAGTGA 59.249 55.000 0.00 0.00 36.97 3.41
1564 2601 1.538419 GCGGGCTGACCTATAAGTGAC 60.538 57.143 0.00 0.00 36.97 3.67
1565 2602 1.754803 CGGGCTGACCTATAAGTGACA 59.245 52.381 0.00 0.00 36.97 3.58
1566 2603 2.365617 CGGGCTGACCTATAAGTGACAT 59.634 50.000 0.00 0.00 36.97 3.06
1567 2604 3.733337 GGGCTGACCTATAAGTGACATG 58.267 50.000 0.00 0.00 35.85 3.21
1568 2605 3.134804 GGGCTGACCTATAAGTGACATGT 59.865 47.826 0.00 0.00 35.85 3.21
1569 2606 4.372656 GGCTGACCTATAAGTGACATGTC 58.627 47.826 19.27 19.27 0.00 3.06
1570 2607 4.141937 GGCTGACCTATAAGTGACATGTCA 60.142 45.833 24.56 24.56 37.24 3.58
1583 2620 5.484173 TGACATGTCACAAAAACTGACTC 57.516 39.130 24.56 0.00 39.11 3.36
1584 2621 4.940654 TGACATGTCACAAAAACTGACTCA 59.059 37.500 24.56 0.00 39.11 3.41
1585 2622 5.163764 TGACATGTCACAAAAACTGACTCAC 60.164 40.000 24.56 0.00 39.11 3.51
1586 2623 4.096382 ACATGTCACAAAAACTGACTCACC 59.904 41.667 0.00 0.00 39.11 4.02
1587 2624 3.013921 TGTCACAAAAACTGACTCACCC 58.986 45.455 0.00 0.00 39.11 4.61
1588 2625 2.031683 GTCACAAAAACTGACTCACCCG 59.968 50.000 0.00 0.00 35.99 5.28
1589 2626 1.333619 CACAAAAACTGACTCACCCGG 59.666 52.381 0.00 0.00 0.00 5.73
1590 2627 0.951558 CAAAAACTGACTCACCCGGG 59.048 55.000 22.25 22.25 0.00 5.73
1591 2628 0.822121 AAAAACTGACTCACCCGGGC 60.822 55.000 24.08 3.75 0.00 6.13
1592 2629 3.530910 AAACTGACTCACCCGGGCG 62.531 63.158 24.08 12.71 0.00 6.13
1605 2642 2.746277 GGGCGCCTCAAACGTCAT 60.746 61.111 28.56 0.00 36.72 3.06
1606 2643 2.480555 GGCGCCTCAAACGTCATG 59.519 61.111 22.15 0.00 34.67 3.07
1607 2644 2.480555 GCGCCTCAAACGTCATGG 59.519 61.111 0.00 0.00 0.00 3.66
1608 2645 2.325082 GCGCCTCAAACGTCATGGT 61.325 57.895 0.00 0.00 0.00 3.55
1609 2646 1.852067 GCGCCTCAAACGTCATGGTT 61.852 55.000 0.00 0.00 0.00 3.67
1610 2647 0.110238 CGCCTCAAACGTCATGGTTG 60.110 55.000 0.00 0.00 0.00 3.77
1611 2648 0.951558 GCCTCAAACGTCATGGTTGT 59.048 50.000 0.00 0.00 0.00 3.32
1612 2649 1.336755 GCCTCAAACGTCATGGTTGTT 59.663 47.619 0.00 0.00 0.00 2.83
1613 2650 2.604614 GCCTCAAACGTCATGGTTGTTC 60.605 50.000 0.00 0.00 0.00 3.18
1614 2651 2.349438 CCTCAAACGTCATGGTTGTTCG 60.349 50.000 0.00 0.00 0.00 3.95
1615 2652 1.600013 TCAAACGTCATGGTTGTTCGG 59.400 47.619 0.00 0.00 0.00 4.30
1616 2653 0.309612 AAACGTCATGGTTGTTCGGC 59.690 50.000 0.00 0.00 0.00 5.54
1617 2654 1.837538 AACGTCATGGTTGTTCGGCG 61.838 55.000 0.00 0.00 0.00 6.46
1618 2655 2.314647 CGTCATGGTTGTTCGGCGT 61.315 57.895 6.85 0.00 0.00 5.68
1619 2656 1.495951 GTCATGGTTGTTCGGCGTC 59.504 57.895 6.85 2.07 0.00 5.19
1620 2657 1.669760 TCATGGTTGTTCGGCGTCC 60.670 57.895 6.85 3.98 0.00 4.79
1621 2658 1.963855 CATGGTTGTTCGGCGTCCA 60.964 57.895 6.85 9.59 0.00 4.02
1622 2659 1.002624 ATGGTTGTTCGGCGTCCAT 60.003 52.632 6.85 11.39 34.55 3.41
1623 2660 0.608035 ATGGTTGTTCGGCGTCCATT 60.608 50.000 6.85 0.00 35.69 3.16
1624 2661 0.035036 TGGTTGTTCGGCGTCCATTA 59.965 50.000 6.85 0.00 0.00 1.90
1625 2662 1.339247 TGGTTGTTCGGCGTCCATTAT 60.339 47.619 6.85 0.00 0.00 1.28
1626 2663 2.093606 TGGTTGTTCGGCGTCCATTATA 60.094 45.455 6.85 0.00 0.00 0.98
1627 2664 3.135994 GGTTGTTCGGCGTCCATTATAT 58.864 45.455 6.85 0.00 0.00 0.86
1628 2665 3.185797 GGTTGTTCGGCGTCCATTATATC 59.814 47.826 6.85 0.00 0.00 1.63
1629 2666 3.034721 TGTTCGGCGTCCATTATATCC 57.965 47.619 6.85 0.00 0.00 2.59
1630 2667 2.365941 TGTTCGGCGTCCATTATATCCA 59.634 45.455 6.85 0.00 0.00 3.41
1631 2668 2.993899 GTTCGGCGTCCATTATATCCAG 59.006 50.000 6.85 0.00 0.00 3.86
1632 2669 1.067142 TCGGCGTCCATTATATCCAGC 60.067 52.381 6.85 0.00 0.00 4.85
1633 2670 1.739067 GGCGTCCATTATATCCAGCC 58.261 55.000 0.00 0.00 36.32 4.85
1634 2671 1.679032 GGCGTCCATTATATCCAGCCC 60.679 57.143 0.00 0.00 37.54 5.19
1635 2672 1.003118 GCGTCCATTATATCCAGCCCA 59.997 52.381 0.00 0.00 0.00 5.36
1636 2673 2.552155 GCGTCCATTATATCCAGCCCAA 60.552 50.000 0.00 0.00 0.00 4.12
1637 2674 3.750371 CGTCCATTATATCCAGCCCAAA 58.250 45.455 0.00 0.00 0.00 3.28
1638 2675 4.335416 CGTCCATTATATCCAGCCCAAAT 58.665 43.478 0.00 0.00 0.00 2.32
1639 2676 5.496556 CGTCCATTATATCCAGCCCAAATA 58.503 41.667 0.00 0.00 0.00 1.40
1640 2677 6.122277 CGTCCATTATATCCAGCCCAAATAT 58.878 40.000 0.00 0.00 0.00 1.28
1641 2678 6.038603 CGTCCATTATATCCAGCCCAAATATG 59.961 42.308 0.00 0.00 0.00 1.78
1662 2699 3.499737 CAATCTGGGCGCGTCCAC 61.500 66.667 32.02 13.75 36.21 4.02
1663 2700 4.778143 AATCTGGGCGCGTCCACC 62.778 66.667 32.02 16.15 36.21 4.61
1673 2710 3.991051 CGTCCACCACGTCAGGCT 61.991 66.667 0.00 0.00 44.07 4.58
1675 2712 4.314440 TCCACCACGTCAGGCTGC 62.314 66.667 10.34 4.16 0.00 5.25
1677 2714 4.320456 CACCACGTCAGGCTGCCT 62.320 66.667 17.22 17.22 0.00 4.75
1682 2719 3.699894 CGTCAGGCTGCCTCACCT 61.700 66.667 20.49 0.00 36.45 4.00
1689 2726 3.775654 CTGCCTCACCTCGACCCC 61.776 72.222 0.00 0.00 0.00 4.95
1698 2735 3.578716 CTCACCTCGACCCCACATATATT 59.421 47.826 0.00 0.00 0.00 1.28
1699 2736 3.576982 TCACCTCGACCCCACATATATTC 59.423 47.826 0.00 0.00 0.00 1.75
1700 2737 2.904434 ACCTCGACCCCACATATATTCC 59.096 50.000 0.00 0.00 0.00 3.01
1701 2738 2.236395 CCTCGACCCCACATATATTCCC 59.764 54.545 0.00 0.00 0.00 3.97
1704 2741 3.173965 CGACCCCACATATATTCCCTCT 58.826 50.000 0.00 0.00 0.00 3.69
1712 2749 6.013032 CCCACATATATTCCCTCTGATGAACT 60.013 42.308 0.00 0.00 0.00 3.01
1715 2752 8.373981 CACATATATTCCCTCTGATGAACTCTT 58.626 37.037 0.00 0.00 0.00 2.85
1716 2753 8.592809 ACATATATTCCCTCTGATGAACTCTTC 58.407 37.037 0.00 0.00 0.00 2.87
1719 2756 3.784178 TCCCTCTGATGAACTCTTCACT 58.216 45.455 0.00 0.00 43.48 3.41
1720 2757 3.513119 TCCCTCTGATGAACTCTTCACTG 59.487 47.826 0.00 0.00 43.48 3.66
1721 2758 3.260740 CCTCTGATGAACTCTTCACTGC 58.739 50.000 0.00 0.00 43.48 4.40
1722 2759 3.306571 CCTCTGATGAACTCTTCACTGCA 60.307 47.826 0.00 0.00 43.48 4.41
1723 2760 4.313282 CTCTGATGAACTCTTCACTGCAA 58.687 43.478 0.00 0.00 43.48 4.08
1724 2761 4.903054 TCTGATGAACTCTTCACTGCAAT 58.097 39.130 0.00 0.00 43.48 3.56
1725 2762 4.934001 TCTGATGAACTCTTCACTGCAATC 59.066 41.667 0.00 0.00 43.48 2.67
1726 2763 4.005650 TGATGAACTCTTCACTGCAATCC 58.994 43.478 0.00 0.00 43.48 3.01
1727 2764 2.416747 TGAACTCTTCACTGCAATCCG 58.583 47.619 0.00 0.00 34.08 4.18
1728 2765 2.224281 TGAACTCTTCACTGCAATCCGT 60.224 45.455 0.00 0.00 34.08 4.69
1740 2777 1.726853 CAATCCGTTCAGTCCACTCC 58.273 55.000 0.00 0.00 0.00 3.85
1744 2781 0.038159 CCGTTCAGTCCACTCCACTC 60.038 60.000 0.00 0.00 0.00 3.51
1747 2784 2.243810 GTTCAGTCCACTCCACTCTCT 58.756 52.381 0.00 0.00 0.00 3.10
1748 2785 3.422796 GTTCAGTCCACTCCACTCTCTA 58.577 50.000 0.00 0.00 0.00 2.43
1749 2786 4.020543 GTTCAGTCCACTCCACTCTCTAT 58.979 47.826 0.00 0.00 0.00 1.98
1750 2787 3.625853 TCAGTCCACTCCACTCTCTATG 58.374 50.000 0.00 0.00 0.00 2.23
1751 2788 3.010696 TCAGTCCACTCCACTCTCTATGT 59.989 47.826 0.00 0.00 0.00 2.29
1752 2789 3.380004 CAGTCCACTCCACTCTCTATGTC 59.620 52.174 0.00 0.00 0.00 3.06
1753 2790 2.691011 GTCCACTCCACTCTCTATGTCC 59.309 54.545 0.00 0.00 0.00 4.02
1754 2791 2.583101 TCCACTCCACTCTCTATGTCCT 59.417 50.000 0.00 0.00 0.00 3.85
1755 2792 2.955660 CCACTCCACTCTCTATGTCCTC 59.044 54.545 0.00 0.00 0.00 3.71
1756 2793 3.372566 CCACTCCACTCTCTATGTCCTCT 60.373 52.174 0.00 0.00 0.00 3.69
1757 2794 3.882888 CACTCCACTCTCTATGTCCTCTC 59.117 52.174 0.00 0.00 0.00 3.20
1758 2795 3.138304 CTCCACTCTCTATGTCCTCTCG 58.862 54.545 0.00 0.00 0.00 4.04
1759 2796 2.506231 TCCACTCTCTATGTCCTCTCGT 59.494 50.000 0.00 0.00 0.00 4.18
1760 2797 2.875933 CCACTCTCTATGTCCTCTCGTC 59.124 54.545 0.00 0.00 0.00 4.20
1761 2798 3.433031 CCACTCTCTATGTCCTCTCGTCT 60.433 52.174 0.00 0.00 0.00 4.18
1762 2799 4.196193 CACTCTCTATGTCCTCTCGTCTT 58.804 47.826 0.00 0.00 0.00 3.01
1763 2800 4.272504 CACTCTCTATGTCCTCTCGTCTTC 59.727 50.000 0.00 0.00 0.00 2.87
1764 2801 3.811083 TCTCTATGTCCTCTCGTCTTCC 58.189 50.000 0.00 0.00 0.00 3.46
1765 2802 2.882137 CTCTATGTCCTCTCGTCTTCCC 59.118 54.545 0.00 0.00 0.00 3.97
1766 2803 2.241430 TCTATGTCCTCTCGTCTTCCCA 59.759 50.000 0.00 0.00 0.00 4.37
1767 2804 1.938585 ATGTCCTCTCGTCTTCCCAA 58.061 50.000 0.00 0.00 0.00 4.12
1786 2823 3.457380 CCAATCCATCCTCTTCTCTTCCA 59.543 47.826 0.00 0.00 0.00 3.53
1807 2865 0.631753 ATCCGTCCTCTCCTCTTCCA 59.368 55.000 0.00 0.00 0.00 3.53
1851 2910 2.586245 CGGCTCTGGCTCCAATGA 59.414 61.111 0.00 0.00 38.73 2.57
1872 2931 0.305009 GACGAGAGCGACATCGATGA 59.695 55.000 31.33 0.00 41.40 2.92
1882 2941 2.280971 CGACATCGATGAAGTTGCTCTG 59.719 50.000 31.33 9.24 43.02 3.35
2003 3062 3.662117 GAATTTGCCGGGCCCTCCT 62.662 63.158 22.43 0.00 0.00 3.69
2016 3075 2.267006 CTCCTGTCTGGCGCACAT 59.733 61.111 10.83 0.00 35.26 3.21
2134 3200 4.349503 ATGCTTGTGCCCTCGCCA 62.350 61.111 0.00 0.00 38.71 5.69
2165 3231 1.072678 TCGAGGACACCTGAGTCGT 59.927 57.895 0.00 0.00 39.42 4.34
2214 3284 3.083349 CGTGAGGGAGGCCATGGA 61.083 66.667 18.40 0.00 0.00 3.41
2327 3411 1.202639 TGATAACGGCGGAGATGCATT 60.203 47.619 13.24 0.00 36.28 3.56
2506 3594 2.605823 GCTATCGGACGACTCCAATGAG 60.606 54.545 0.00 0.00 44.62 2.90
2518 3607 4.305524 ACTCCAATGAGGGATCAATCTCT 58.694 43.478 0.00 0.00 43.29 3.10
2522 3614 4.141551 CCAATGAGGGATCAATCTCTGACA 60.142 45.833 0.00 0.00 37.86 3.58
2527 3622 3.708631 AGGGATCAATCTCTGACAACGAT 59.291 43.478 0.00 0.00 35.97 3.73
2531 3626 3.849911 TCAATCTCTGACAACGATGACC 58.150 45.455 0.00 0.00 0.00 4.02
2630 3728 1.243902 TGGTGATTTCCTTTGCCGTC 58.756 50.000 0.00 0.00 0.00 4.79
2766 3876 3.300066 GTGCTAGTTCGTTGATGTACGTC 59.700 47.826 8.21 8.21 42.01 4.34
2854 3964 2.812011 GACGCACCAAAATAAGGAGTGT 59.188 45.455 0.00 0.00 41.95 3.55
2875 3985 3.986006 GTCAGTGCCCACGGACGA 61.986 66.667 14.14 0.00 44.06 4.20
2882 3992 3.411351 CCCACGGACGAGCGTTTG 61.411 66.667 0.00 0.00 0.00 2.93
2888 3998 0.736325 CGGACGAGCGTTTGAAGGAT 60.736 55.000 0.00 0.00 0.00 3.24
2905 4018 4.760530 AGGATCGGATTTGATGTCTTCA 57.239 40.909 0.00 0.00 0.00 3.02
2908 4021 3.333029 TCGGATTTGATGTCTTCAGCA 57.667 42.857 0.00 0.00 38.24 4.41
2933 4046 4.991153 GATGCTCCCATCTACGATATCA 57.009 45.455 3.12 0.00 43.62 2.15
2934 4047 5.528043 GATGCTCCCATCTACGATATCAT 57.472 43.478 3.12 0.00 43.62 2.45
2935 4048 4.725790 TGCTCCCATCTACGATATCATG 57.274 45.455 3.12 0.00 0.00 3.07
2936 4049 3.118992 TGCTCCCATCTACGATATCATGC 60.119 47.826 3.12 0.00 0.00 4.06
2937 4050 3.118992 GCTCCCATCTACGATATCATGCA 60.119 47.826 3.12 0.00 0.00 3.96
2938 4051 4.680702 CTCCCATCTACGATATCATGCAG 58.319 47.826 3.12 0.00 0.00 4.41
2939 4052 4.089361 TCCCATCTACGATATCATGCAGT 58.911 43.478 3.12 0.00 0.00 4.40
2940 4053 5.261216 TCCCATCTACGATATCATGCAGTA 58.739 41.667 3.12 0.00 0.00 2.74
2941 4054 5.358160 TCCCATCTACGATATCATGCAGTAG 59.642 44.000 3.12 6.04 36.91 2.57
2942 4055 5.126222 CCCATCTACGATATCATGCAGTAGT 59.874 44.000 3.12 0.00 36.91 2.73
2943 4056 6.318900 CCCATCTACGATATCATGCAGTAGTA 59.681 42.308 3.12 0.00 36.91 1.82
2944 4057 7.190191 CCATCTACGATATCATGCAGTAGTAC 58.810 42.308 3.12 0.00 36.91 2.73
2958 4084 4.974888 GCAGTAGTACGTATCTTGTAAGCC 59.025 45.833 0.00 0.00 0.00 4.35
3027 4159 8.996988 TTTCACAGTTTTACTTATAACAAGCG 57.003 30.769 0.00 0.00 0.00 4.68
3038 4170 7.435068 ACTTATAACAAGCGAACTGTGATTT 57.565 32.000 0.00 0.00 0.00 2.17
3039 4171 7.871853 ACTTATAACAAGCGAACTGTGATTTT 58.128 30.769 0.00 0.00 0.00 1.82
3072 4204 4.799564 AAAAAGTCAAGCCAACTGTGAA 57.200 36.364 0.00 0.00 0.00 3.18
3073 4205 5.343307 AAAAAGTCAAGCCAACTGTGAAT 57.657 34.783 0.00 0.00 0.00 2.57
3074 4206 3.996150 AAGTCAAGCCAACTGTGAATG 57.004 42.857 0.00 0.00 0.00 2.67
3075 4207 1.610522 AGTCAAGCCAACTGTGAATGC 59.389 47.619 0.00 0.00 0.00 3.56
3087 4225 6.350027 CCAACTGTGAATGCCAACACATTATA 60.350 38.462 8.16 0.00 44.21 0.98
3090 4228 5.948588 TGTGAATGCCAACACATTATACAC 58.051 37.500 4.41 0.00 40.31 2.90
3091 4229 5.105957 TGTGAATGCCAACACATTATACACC 60.106 40.000 4.41 0.00 40.31 4.16
3092 4230 5.012893 TGAATGCCAACACATTATACACCA 58.987 37.500 0.00 0.00 40.31 4.17
3093 4231 5.655974 TGAATGCCAACACATTATACACCAT 59.344 36.000 0.00 0.00 40.31 3.55
3094 4232 6.154192 TGAATGCCAACACATTATACACCATT 59.846 34.615 0.00 0.00 40.31 3.16
3095 4233 5.321959 TGCCAACACATTATACACCATTG 57.678 39.130 0.00 0.00 0.00 2.82
3104 4242 4.955811 TTATACACCATTGCCGAGAGAT 57.044 40.909 0.00 0.00 0.00 2.75
3222 4376 1.996086 CCTCCCAACCACCCGTTAT 59.004 57.895 0.00 0.00 31.77 1.89
3225 4379 1.140252 CTCCCAACCACCCGTTATAGG 59.860 57.143 0.00 0.00 31.77 2.57
3269 4431 4.158394 ACCTGAATGTTGCTTAATTCGCAT 59.842 37.500 3.52 0.00 37.22 4.73
3293 4487 5.043903 CGAACATAATACTGTGAGGGAGTG 58.956 45.833 0.00 0.00 0.00 3.51
3299 4493 0.616111 ACTGTGAGGGAGTGGCTAGG 60.616 60.000 0.00 0.00 0.00 3.02
3306 4500 0.324830 GGGAGTGGCTAGGAGACAGT 60.325 60.000 0.00 0.00 40.28 3.55
3312 4506 0.820871 GGCTAGGAGACAGTCACCTG 59.179 60.000 25.49 17.08 37.99 4.00
3313 4507 1.617263 GGCTAGGAGACAGTCACCTGA 60.617 57.143 25.49 11.35 41.50 3.86
3316 4510 3.196685 GCTAGGAGACAGTCACCTGAAAT 59.803 47.826 25.49 5.53 41.50 2.17
3319 4513 5.053978 AGGAGACAGTCACCTGAAATTTT 57.946 39.130 18.07 0.00 41.50 1.82
3320 4514 5.449553 AGGAGACAGTCACCTGAAATTTTT 58.550 37.500 18.07 0.00 41.50 1.94
3321 4515 5.300286 AGGAGACAGTCACCTGAAATTTTTG 59.700 40.000 18.07 0.00 41.50 2.44
3323 4517 6.183360 GGAGACAGTCACCTGAAATTTTTGAA 60.183 38.462 9.68 0.00 41.50 2.69
3325 4519 6.603201 AGACAGTCACCTGAAATTTTTGAAGA 59.397 34.615 2.66 0.00 41.50 2.87
3326 4520 6.799512 ACAGTCACCTGAAATTTTTGAAGAG 58.200 36.000 0.00 0.00 41.50 2.85
3327 4521 6.183360 ACAGTCACCTGAAATTTTTGAAGAGG 60.183 38.462 0.00 0.00 41.50 3.69
3331 4525 5.816777 CACCTGAAATTTTTGAAGAGGCAAA 59.183 36.000 0.00 0.00 36.08 3.68
3336 4530 6.983307 TGAAATTTTTGAAGAGGCAAATCGAA 59.017 30.769 0.00 0.00 37.57 3.71
3351 4545 8.831550 AGGCAAATCGAATTCTAACTTTCTATC 58.168 33.333 3.52 0.00 0.00 2.08
3386 4580 1.404843 AGATCCAACGTCTAGGGCTC 58.595 55.000 0.00 0.00 0.00 4.70
3397 4591 1.757118 TCTAGGGCTCCATCTTCAACG 59.243 52.381 0.00 0.00 0.00 4.10
3405 4599 3.057019 CTCCATCTTCAACGTCGAAACA 58.943 45.455 0.00 0.00 0.00 2.83
3435 4629 5.762218 ACATTGTTTCTCTTCTTCCTCACTG 59.238 40.000 0.00 0.00 0.00 3.66
3436 4630 3.733337 TGTTTCTCTTCTTCCTCACTGC 58.267 45.455 0.00 0.00 0.00 4.40
3459 4653 2.903784 TGTTCGATCTTTCTCTTCCCCA 59.096 45.455 0.00 0.00 0.00 4.96
3489 4683 4.699522 GACCACCGGCCAGACCAC 62.700 72.222 0.00 0.00 39.03 4.16
3492 4686 4.704833 CACCGGCCAGACCACCAG 62.705 72.222 0.00 0.00 39.03 4.00
3500 4694 3.570212 AGACCACCAGCCACCACC 61.570 66.667 0.00 0.00 0.00 4.61
3568 4762 0.178935 CCCCCAAACCAATGTCCACT 60.179 55.000 0.00 0.00 0.00 4.00
3569 4763 1.076350 CCCCCAAACCAATGTCCACTA 59.924 52.381 0.00 0.00 0.00 2.74
3576 4770 1.134401 ACCAATGTCCACTATCGGCTG 60.134 52.381 0.00 0.00 0.00 4.85
3577 4771 0.940126 CAATGTCCACTATCGGCTGC 59.060 55.000 0.00 0.00 0.00 5.25
3578 4772 0.541392 AATGTCCACTATCGGCTGCA 59.459 50.000 0.50 0.00 0.00 4.41
3608 4802 1.465623 CTATCCCTCTAGCCCCGGT 59.534 63.158 0.00 0.00 0.00 5.28
3616 4810 2.039787 TAGCCCCGGTGATGGTCA 59.960 61.111 0.00 0.00 0.00 4.02
3623 4818 0.804989 CCGGTGATGGTCAGCTTTTC 59.195 55.000 7.45 0.00 42.30 2.29
3626 4821 1.610624 GGTGATGGTCAGCTTTTCCGA 60.611 52.381 2.16 0.00 41.34 4.55
3627 4822 1.464997 GTGATGGTCAGCTTTTCCGAC 59.535 52.381 0.00 0.00 0.00 4.79
3633 4828 0.391597 TCAGCTTTTCCGACGAACCT 59.608 50.000 0.00 0.00 0.00 3.50
3656 4852 2.204244 ACCCCCACACCCCTAAGG 60.204 66.667 0.00 0.00 43.78 2.69
3693 4896 4.265073 GCCTGCCACCCTAAGATATATTG 58.735 47.826 0.00 0.00 0.00 1.90
3695 4898 5.248640 CCTGCCACCCTAAGATATATTGTG 58.751 45.833 0.00 0.00 0.00 3.33
3696 4899 5.241403 TGCCACCCTAAGATATATTGTGG 57.759 43.478 11.75 11.75 43.55 4.17
3697 4900 4.042809 TGCCACCCTAAGATATATTGTGGG 59.957 45.833 15.82 16.20 41.55 4.61
3698 4901 4.567747 GCCACCCTAAGATATATTGTGGGG 60.568 50.000 20.08 16.52 41.55 4.96
3700 4903 5.280521 CCACCCTAAGATATATTGTGGGGTC 60.281 48.000 20.08 0.00 43.22 4.46
3701 4904 4.530946 ACCCTAAGATATATTGTGGGGTCG 59.469 45.833 20.08 3.64 41.54 4.79
3704 4907 2.621070 AGATATATTGTGGGGTCGCCT 58.379 47.619 7.55 0.00 0.00 5.52
3705 4908 2.303022 AGATATATTGTGGGGTCGCCTG 59.697 50.000 7.55 0.00 0.00 4.85
3706 4909 0.107831 TATATTGTGGGGTCGCCTGC 59.892 55.000 7.55 1.17 0.00 4.85
3707 4910 2.624674 ATATTGTGGGGTCGCCTGCC 62.625 60.000 7.55 0.00 0.00 4.85
3714 4917 4.157120 GGTCGCCTGCCACCGTAT 62.157 66.667 0.00 0.00 0.00 3.06
3715 4918 2.890474 GTCGCCTGCCACCGTATG 60.890 66.667 0.00 0.00 0.00 2.39
3717 4920 2.108976 CGCCTGCCACCGTATGAT 59.891 61.111 0.00 0.00 0.00 2.45
3720 4923 1.808512 CGCCTGCCACCGTATGATAAA 60.809 52.381 0.00 0.00 0.00 1.40
3721 4924 1.602377 GCCTGCCACCGTATGATAAAC 59.398 52.381 0.00 0.00 0.00 2.01
3722 4925 2.218603 CCTGCCACCGTATGATAAACC 58.781 52.381 0.00 0.00 0.00 3.27
3723 4926 2.158813 CCTGCCACCGTATGATAAACCT 60.159 50.000 0.00 0.00 0.00 3.50
3724 4927 3.541632 CTGCCACCGTATGATAAACCTT 58.458 45.455 0.00 0.00 0.00 3.50
3729 4932 4.127171 CACCGTATGATAAACCTTGAGGG 58.873 47.826 1.54 0.00 40.27 4.30
3750 4953 2.411904 CTTCTCAAGCGTGCTTCTTCT 58.588 47.619 3.68 0.00 33.42 2.85
3761 4964 1.027255 GCTTCTTCTTTCCCTCCGGC 61.027 60.000 0.00 0.00 0.00 6.13
3773 4997 3.302347 CTCCGGCGAGTTCCTTGCT 62.302 63.158 9.30 0.00 40.49 3.91
3777 5001 1.021390 CGGCGAGTTCCTTGCTTCAT 61.021 55.000 0.00 0.00 40.49 2.57
3779 5003 0.179179 GCGAGTTCCTTGCTTCATGC 60.179 55.000 0.00 0.00 37.84 4.06
3780 5004 0.449388 CGAGTTCCTTGCTTCATGCC 59.551 55.000 0.00 0.00 42.00 4.40
3793 5017 4.020928 TGCTTCATGCCAAATTTGACTGAT 60.021 37.500 19.86 3.01 42.00 2.90
3798 5022 4.952071 TGCCAAATTTGACTGATCCAAA 57.048 36.364 19.86 0.00 37.82 3.28
3831 5055 6.621613 TCAGGCGACTTACATATAGCTATTG 58.378 40.000 12.39 12.05 40.21 1.90
3894 5380 1.204146 ACACGCCCACAAGATAGGAT 58.796 50.000 0.00 0.00 0.00 3.24
3918 5404 1.353022 CTTACCAACCAGGCTACCCAA 59.647 52.381 0.00 0.00 43.14 4.12
3997 5498 3.393970 CCTCTCCCCGAGCAAGCA 61.394 66.667 0.00 0.00 38.49 3.91
4003 5504 2.348998 CCCGAGCAAGCAACTCCT 59.651 61.111 0.00 0.00 0.00 3.69
4011 5512 2.370189 AGCAAGCAACTCCTACTTCACT 59.630 45.455 0.00 0.00 0.00 3.41
4034 5535 0.889306 GACGACCTACCAAGAGCACT 59.111 55.000 0.00 0.00 0.00 4.40
4040 5541 2.639839 ACCTACCAAGAGCACTCACAAT 59.360 45.455 0.00 0.00 0.00 2.71
4041 5542 3.005554 CCTACCAAGAGCACTCACAATG 58.994 50.000 0.00 0.00 0.00 2.82
4061 5562 2.305635 TGAGCAGCATGAAAGAACCCTA 59.694 45.455 0.00 0.00 39.69 3.53
4089 5591 1.268794 TGCCAAACAATCAACCGAACG 60.269 47.619 0.00 0.00 0.00 3.95
4109 5614 2.159421 CGCTTCGAGGACTAAACAGCTA 60.159 50.000 0.00 0.00 0.00 3.32
4169 5674 3.054655 ACCTTACACAAACATAGCCCGAT 60.055 43.478 0.00 0.00 0.00 4.18
4172 5677 5.587043 CCTTACACAAACATAGCCCGATTTA 59.413 40.000 0.00 0.00 0.00 1.40
4188 5693 4.142182 CCGATTTACCCATCACAAAGCATT 60.142 41.667 0.00 0.00 0.00 3.56
4237 5748 7.097192 CACTACTGCTCCAACTTCATACTTAA 58.903 38.462 0.00 0.00 0.00 1.85
4245 5756 6.245408 TCCAACTTCATACTTAAAGGCATGT 58.755 36.000 0.00 0.00 0.00 3.21
4295 5806 2.034558 CGACCATGTTTTTCTTGCCACT 59.965 45.455 0.00 0.00 0.00 4.00
4322 5833 1.005137 GTTGCCACAAAAATGCACACG 60.005 47.619 0.00 0.00 34.16 4.49
4353 6410 8.463930 AAGACAAATTGTAGAAATGTCCTTCA 57.536 30.769 14.46 0.00 40.92 3.02
4364 6421 7.219484 AGAAATGTCCTTCAAAATTCGTGAT 57.781 32.000 0.00 0.00 0.00 3.06
4586 6660 5.507985 GCTATGCCAAGTGCCTTTAATTAGG 60.508 44.000 0.00 0.00 40.16 2.69
4595 6669 6.727394 AGTGCCTTTAATTAGGTGAACCATA 58.273 36.000 1.62 0.00 37.63 2.74
4599 6673 7.442969 TGCCTTTAATTAGGTGAACCATATACG 59.557 37.037 1.62 0.00 37.63 3.06
4606 6680 8.882415 ATTAGGTGAACCATATACGTACAAAG 57.118 34.615 0.00 0.00 38.89 2.77
4647 6721 6.248433 TCCTTGGAATTTTGCATTCTCTACT 58.752 36.000 0.00 0.00 0.00 2.57
4652 6816 9.679661 TTGGAATTTTGCATTCTCTACTATGTA 57.320 29.630 0.00 0.00 0.00 2.29
4668 6832 2.831685 TGTAGCAGACGTTGGAACAT 57.168 45.000 0.00 0.00 39.30 2.71
4670 6834 3.581755 TGTAGCAGACGTTGGAACATAC 58.418 45.455 0.00 0.00 39.30 2.39
4680 6844 7.533900 CAGACGTTGGAACATACACTTTTATTG 59.466 37.037 0.00 0.00 39.30 1.90
4722 6889 0.607217 TCCACTTGCATGCAGTCAGG 60.607 55.000 21.50 19.85 0.00 3.86
4732 6900 0.961019 TGCAGTCAGGGAAATGTTGC 59.039 50.000 0.00 0.00 34.62 4.17
4767 6935 5.935945 TGTCCAGTCAGTGAAGGATTTTTA 58.064 37.500 16.24 2.41 31.91 1.52
4935 7660 2.926329 ACCATTATGTTCTCCACCCCTT 59.074 45.455 0.00 0.00 0.00 3.95
4990 7715 8.669243 GTGTAGAACATTCCTCCATAAGAAAAG 58.331 37.037 0.00 0.00 0.00 2.27
5085 8106 6.016276 GCCTCCAAACTAAGACAAGAATTTCA 60.016 38.462 0.00 0.00 0.00 2.69
5203 8231 1.733360 CCATTTTTCAATTGCCGCCAG 59.267 47.619 0.00 0.00 0.00 4.85
5318 8365 2.293122 ACTACTACACACGCACGGTTTA 59.707 45.455 0.00 0.00 0.00 2.01
5573 8671 1.582968 GTCTCTACGCACCGGACAA 59.417 57.895 9.46 0.00 0.00 3.18
5640 8738 3.047877 GCGCCCAACTACGTGCTT 61.048 61.111 0.00 0.00 32.74 3.91
5729 8827 1.006758 TGTCTCCTTCCGGTACCTCAT 59.993 52.381 10.90 0.00 0.00 2.90
5740 8838 0.036765 GTACCTCATCGTGGGCAACA 60.037 55.000 0.00 0.00 39.74 3.33
5827 8925 7.174946 CACATTAGTCCTGGTTTGTAACAGAAT 59.825 37.037 0.00 0.00 36.86 2.40
5872 8970 2.998480 TTCCAACGGCTAGGCGGA 60.998 61.111 37.39 24.36 33.14 5.54
5880 8978 2.107953 GCTAGGCGGAAGGAGCTG 59.892 66.667 0.00 0.00 34.52 4.24
6089 9193 3.440127 CTCTCCCTCTCCTCTGTTCTTT 58.560 50.000 0.00 0.00 0.00 2.52
6113 9217 4.099266 CCTTCTTCCTCTCGAGTTCATCAT 59.901 45.833 13.13 0.00 0.00 2.45
6178 9282 6.723515 TCCATTCAAATGATCACCAAGGTTAA 59.276 34.615 0.00 0.00 38.70 2.01
6433 9537 1.517242 CTTGTGGTGAGCCTCTTGTC 58.483 55.000 0.00 0.00 35.27 3.18
6525 9629 4.447389 ACCCGTACGTTGTTTGTTATACAC 59.553 41.667 15.21 0.00 0.00 2.90
6554 9658 0.942252 GTTTTGATATCCGTCCCCGC 59.058 55.000 0.00 0.00 0.00 6.13
6696 9800 4.401202 GGTATGTGAACCGGAAATTCCAAT 59.599 41.667 9.46 0.88 35.91 3.16
6744 9848 9.503427 AAATTTAGTTGAAAGAGAAAACGAGTG 57.497 29.630 0.00 0.00 0.00 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 4.697756 CCATGCCGGACACCACGT 62.698 66.667 5.05 0.00 36.56 4.49
39 40 2.684881 CTCCTACCAACAATGTCCATGC 59.315 50.000 0.00 0.00 0.00 4.06
49 50 1.191535 CGTCCATCCTCCTACCAACA 58.808 55.000 0.00 0.00 0.00 3.33
63 64 3.785859 GCAGCCAGGGATCGTCCA 61.786 66.667 6.41 0.00 38.64 4.02
124 125 3.218470 GCTGCCTGCACCAACACA 61.218 61.111 0.00 0.00 42.31 3.72
152 153 2.280186 GCCGCTCCCCAAGTATCG 60.280 66.667 0.00 0.00 0.00 2.92
180 183 0.526211 GAGGCAAATTGGGGTCGTTC 59.474 55.000 0.00 0.00 0.00 3.95
187 190 0.321346 GTTGTGGGAGGCAAATTGGG 59.679 55.000 0.00 0.00 0.00 4.12
188 191 0.321346 GGTTGTGGGAGGCAAATTGG 59.679 55.000 0.00 0.00 0.00 3.16
190 193 0.835971 GGGGTTGTGGGAGGCAAATT 60.836 55.000 0.00 0.00 0.00 1.82
191 194 1.229177 GGGGTTGTGGGAGGCAAAT 60.229 57.895 0.00 0.00 0.00 2.32
193 196 3.909651 GGGGGTTGTGGGAGGCAA 61.910 66.667 0.00 0.00 0.00 4.52
222 348 1.067516 CCACAAACCAGAGGCAAACTG 59.932 52.381 0.00 0.00 35.43 3.16
233 524 5.508153 CGGACATTTGTTTATCCACAAACCA 60.508 40.000 1.23 0.00 46.76 3.67
314 606 1.534175 CCTGCATTCGTCTAGACCGAC 60.534 57.143 17.23 6.98 33.41 4.79
321 613 0.036765 AAACCGCCTGCATTCGTCTA 60.037 50.000 6.93 0.00 0.00 2.59
351 643 7.173218 TGGTGAAATACTTGAGACATCTTCAAC 59.827 37.037 0.00 0.00 31.43 3.18
355 647 8.517878 CAAATGGTGAAATACTTGAGACATCTT 58.482 33.333 0.00 0.00 0.00 2.40
387 679 1.164411 CAGGTTACGCAAATGGCAGA 58.836 50.000 0.00 0.00 45.17 4.26
391 683 1.094785 CCTCCAGGTTACGCAAATGG 58.905 55.000 0.00 0.00 0.00 3.16
392 684 1.094785 CCCTCCAGGTTACGCAAATG 58.905 55.000 0.00 0.00 0.00 2.32
393 685 0.679960 GCCCTCCAGGTTACGCAAAT 60.680 55.000 0.00 0.00 38.26 2.32
394 686 1.302993 GCCCTCCAGGTTACGCAAA 60.303 57.895 0.00 0.00 38.26 3.68
395 687 2.349755 GCCCTCCAGGTTACGCAA 59.650 61.111 0.00 0.00 38.26 4.85
396 688 4.077184 CGCCCTCCAGGTTACGCA 62.077 66.667 0.00 0.00 38.26 5.24
397 689 4.078516 ACGCCCTCCAGGTTACGC 62.079 66.667 0.00 0.00 38.26 4.42
398 690 2.125673 CACGCCCTCCAGGTTACG 60.126 66.667 0.00 0.00 38.26 3.18
399 691 2.436115 GCACGCCCTCCAGGTTAC 60.436 66.667 0.00 0.00 38.26 2.50
400 692 2.521451 TTGCACGCCCTCCAGGTTA 61.521 57.895 0.00 0.00 38.26 2.85
401 693 3.884774 TTGCACGCCCTCCAGGTT 61.885 61.111 0.00 0.00 38.26 3.50
402 694 4.643387 GTTGCACGCCCTCCAGGT 62.643 66.667 0.00 0.00 38.26 4.00
403 695 4.641645 TGTTGCACGCCCTCCAGG 62.642 66.667 0.00 0.00 39.47 4.45
404 696 3.357079 GTGTTGCACGCCCTCCAG 61.357 66.667 0.00 0.00 0.00 3.86
405 697 3.705934 TTGTGTTGCACGCCCTCCA 62.706 57.895 0.00 0.00 37.14 3.86
406 698 2.904866 TTGTGTTGCACGCCCTCC 60.905 61.111 0.00 0.00 37.14 4.30
412 704 0.100325 ACCACATGTTGTGTTGCACG 59.900 50.000 1.02 0.00 46.45 5.34
465 757 8.143193 TGTATCATTTTGCATTTGTTCTGAAGT 58.857 29.630 0.00 0.00 0.00 3.01
512 804 0.320858 TTGTTCGCGCCTAACATCCA 60.321 50.000 19.94 6.46 36.75 3.41
549 845 2.024655 AGGGTCTTCACTCACCGGTATA 60.025 50.000 6.87 0.00 32.89 1.47
681 990 2.813908 GGCACGTGTCGATCCACC 60.814 66.667 18.38 2.92 31.47 4.61
682 991 2.048597 TGGCACGTGTCGATCCAC 60.049 61.111 16.50 0.00 30.60 4.02
683 992 2.261361 CTGGCACGTGTCGATCCA 59.739 61.111 16.50 13.26 33.19 3.41
684 993 3.188786 GCTGGCACGTGTCGATCC 61.189 66.667 16.50 8.94 0.00 3.36
685 994 2.125912 AGCTGGCACGTGTCGATC 60.126 61.111 16.50 6.83 0.00 3.69
686 995 2.433145 CAGCTGGCACGTGTCGAT 60.433 61.111 16.50 6.29 0.00 3.59
687 996 3.601685 TCAGCTGGCACGTGTCGA 61.602 61.111 16.50 3.28 0.00 4.20
688 997 3.406361 GTCAGCTGGCACGTGTCG 61.406 66.667 14.88 11.43 0.00 4.35
689 998 3.044305 GGTCAGCTGGCACGTGTC 61.044 66.667 21.89 14.58 0.00 3.67
690 999 4.969196 CGGTCAGCTGGCACGTGT 62.969 66.667 21.89 0.00 0.00 4.49
695 1004 0.462581 GATTGATCGGTCAGCTGGCA 60.463 55.000 21.89 0.00 35.39 4.92
708 1017 5.688814 TCACTGGTCAGAGATTGATTGAT 57.311 39.130 4.84 0.00 38.29 2.57
709 1018 5.246883 TCTTCACTGGTCAGAGATTGATTGA 59.753 40.000 4.84 0.00 38.29 2.57
710 1019 5.350914 GTCTTCACTGGTCAGAGATTGATTG 59.649 44.000 4.84 0.00 38.29 2.67
711 1020 5.486526 GTCTTCACTGGTCAGAGATTGATT 58.513 41.667 4.84 0.00 38.29 2.57
811 1127 9.653287 TCCGATTGCTGGTTTATATAGAAATAG 57.347 33.333 0.00 0.25 0.00 1.73
813 1129 8.918202 TTCCGATTGCTGGTTTATATAGAAAT 57.082 30.769 0.00 0.00 0.00 2.17
815 1131 7.042321 CGTTTCCGATTGCTGGTTTATATAGAA 60.042 37.037 0.00 0.00 35.63 2.10
873 1193 6.441093 TTCAGGCTTTGCTGAAATATGTAG 57.559 37.500 0.00 0.00 36.75 2.74
875 1195 4.381292 GCTTCAGGCTTTGCTGAAATATGT 60.381 41.667 0.00 0.00 38.84 2.29
876 1196 4.110482 GCTTCAGGCTTTGCTGAAATATG 58.890 43.478 0.00 0.00 38.84 1.78
943 1293 2.082231 CGTCTTCTCCTCCTACAACGA 58.918 52.381 0.00 0.00 0.00 3.85
1012 1362 2.456119 CGAGGAGCAACGCCATGTC 61.456 63.158 0.00 0.00 0.00 3.06
1093 1988 6.152831 TCGTCCTATATGAGAGAGAGAGAGAG 59.847 46.154 0.00 0.00 0.00 3.20
1095 1990 6.100004 GTCGTCCTATATGAGAGAGAGAGAG 58.900 48.000 0.00 0.00 0.00 3.20
1096 1991 5.046878 GGTCGTCCTATATGAGAGAGAGAGA 60.047 48.000 0.00 0.00 0.00 3.10
1097 1992 5.046591 AGGTCGTCCTATATGAGAGAGAGAG 60.047 48.000 0.00 0.00 43.12 3.20
1098 1993 4.841813 AGGTCGTCCTATATGAGAGAGAGA 59.158 45.833 0.00 0.00 43.12 3.10
1100 1995 5.309638 CAAGGTCGTCCTATATGAGAGAGA 58.690 45.833 0.37 0.00 44.35 3.10
1101 1996 4.083003 GCAAGGTCGTCCTATATGAGAGAG 60.083 50.000 0.37 0.00 44.35 3.20
1102 1997 3.821600 GCAAGGTCGTCCTATATGAGAGA 59.178 47.826 0.37 0.00 44.35 3.10
1103 1998 3.570125 TGCAAGGTCGTCCTATATGAGAG 59.430 47.826 0.37 0.00 44.35 3.20
1107 2002 3.452755 TGTGCAAGGTCGTCCTATATG 57.547 47.619 0.37 0.00 44.35 1.78
1109 2004 3.449377 TCAATGTGCAAGGTCGTCCTATA 59.551 43.478 0.37 0.00 44.35 1.31
1116 2081 5.233957 TGAATAATCAATGTGCAAGGTCG 57.766 39.130 0.00 0.00 30.99 4.79
1141 2106 8.425577 AATTACTCTCGAGTATGTCAATTTGG 57.574 34.615 13.13 0.00 42.83 3.28
1152 2117 2.957006 GGCCCAGAATTACTCTCGAGTA 59.043 50.000 13.13 2.77 42.54 2.59
1153 2118 1.757699 GGCCCAGAATTACTCTCGAGT 59.242 52.381 13.13 4.81 45.02 4.18
1156 2121 2.990066 AAGGCCCAGAATTACTCTCG 57.010 50.000 0.00 0.00 29.07 4.04
1169 2166 1.549203 TCAAGAGATGCAAAAGGCCC 58.451 50.000 0.00 0.00 43.89 5.80
1170 2167 3.194116 TGAATCAAGAGATGCAAAAGGCC 59.806 43.478 0.00 0.00 43.89 5.19
1173 2170 5.407502 TGCATGAATCAAGAGATGCAAAAG 58.592 37.500 6.05 0.00 46.18 2.27
1174 2171 5.394224 TGCATGAATCAAGAGATGCAAAA 57.606 34.783 6.05 0.00 46.18 2.44
1270 2268 2.625790 AGGCGTGTGCTTTTTGGAATTA 59.374 40.909 0.00 0.00 42.25 1.40
1300 2299 1.202580 GCTCTCTTGTCCACGGCATAT 60.203 52.381 0.00 0.00 0.00 1.78
1301 2300 0.175760 GCTCTCTTGTCCACGGCATA 59.824 55.000 0.00 0.00 0.00 3.14
1302 2301 1.078848 GCTCTCTTGTCCACGGCAT 60.079 57.895 0.00 0.00 0.00 4.40
1303 2302 2.159819 GAGCTCTCTTGTCCACGGCA 62.160 60.000 6.43 0.00 0.00 5.69
1307 2315 0.455295 CGACGAGCTCTCTTGTCCAC 60.455 60.000 12.85 0.00 46.45 4.02
1311 2319 2.550606 GGATATCGACGAGCTCTCTTGT 59.449 50.000 12.85 1.38 39.61 3.16
1312 2320 2.550180 TGGATATCGACGAGCTCTCTTG 59.450 50.000 12.85 0.63 0.00 3.02
1345 2381 0.458543 TCTCGCAGCTTTCGGATCAC 60.459 55.000 5.43 0.00 0.00 3.06
1352 2388 1.431036 GGCCATTCTCGCAGCTTTC 59.569 57.895 0.00 0.00 0.00 2.62
1460 2497 9.590451 GAAACCATGTCACATTCAATATGAAAT 57.410 29.630 0.00 0.00 40.12 2.17
1469 2506 4.459330 TGACTGAAACCATGTCACATTCA 58.541 39.130 0.00 0.00 36.03 2.57
1474 2511 5.009010 AGACAATTGACTGAAACCATGTCAC 59.991 40.000 13.59 0.00 39.95 3.67
1493 2530 3.243535 CGGCTGTAGATGCTATGAGACAA 60.244 47.826 0.00 0.00 0.00 3.18
1494 2531 2.294512 CGGCTGTAGATGCTATGAGACA 59.705 50.000 0.00 0.00 0.00 3.41
1502 2539 0.833287 AACATCCGGCTGTAGATGCT 59.167 50.000 12.07 0.00 43.01 3.79
1503 2540 1.599542 GAAACATCCGGCTGTAGATGC 59.400 52.381 12.07 0.00 43.01 3.91
1504 2541 2.905075 TGAAACATCCGGCTGTAGATG 58.095 47.619 12.07 4.07 44.44 2.90
1505 2542 3.627395 TTGAAACATCCGGCTGTAGAT 57.373 42.857 12.07 1.02 0.00 1.98
1506 2543 3.071479 GTTTGAAACATCCGGCTGTAGA 58.929 45.455 12.07 0.00 0.00 2.59
1507 2544 2.161609 GGTTTGAAACATCCGGCTGTAG 59.838 50.000 12.07 0.00 0.00 2.74
1508 2545 2.156098 GGTTTGAAACATCCGGCTGTA 58.844 47.619 12.07 0.00 0.00 2.74
1509 2546 0.958822 GGTTTGAAACATCCGGCTGT 59.041 50.000 4.78 4.78 0.00 4.40
1510 2547 0.243636 GGGTTTGAAACATCCGGCTG 59.756 55.000 10.53 3.14 0.00 4.85
1511 2548 1.241315 CGGGTTTGAAACATCCGGCT 61.241 55.000 15.11 0.00 34.07 5.52
1512 2549 1.211709 CGGGTTTGAAACATCCGGC 59.788 57.895 15.11 0.00 34.07 6.13
1513 2550 0.519961 GACGGGTTTGAAACATCCGG 59.480 55.000 23.03 0.00 39.53 5.14
1514 2551 1.463444 GAGACGGGTTTGAAACATCCG 59.537 52.381 19.43 19.43 40.56 4.18
1515 2552 2.500229 TGAGACGGGTTTGAAACATCC 58.500 47.619 10.53 1.97 0.00 3.51
1516 2553 4.287720 GTTTGAGACGGGTTTGAAACATC 58.712 43.478 10.53 4.47 0.00 3.06
1517 2554 4.301637 GTTTGAGACGGGTTTGAAACAT 57.698 40.909 10.53 0.00 0.00 2.71
1518 2555 3.768468 GTTTGAGACGGGTTTGAAACA 57.232 42.857 10.53 0.00 0.00 2.83
1541 2578 2.436087 CTTATAGGTCAGCCCGCCGG 62.436 65.000 0.00 0.00 38.74 6.13
1542 2579 1.006102 CTTATAGGTCAGCCCGCCG 60.006 63.158 0.00 0.00 38.74 6.46
1543 2580 0.249911 CACTTATAGGTCAGCCCGCC 60.250 60.000 0.00 0.00 38.74 6.13
1544 2581 0.750850 TCACTTATAGGTCAGCCCGC 59.249 55.000 0.00 0.00 38.74 6.13
1545 2582 1.754803 TGTCACTTATAGGTCAGCCCG 59.245 52.381 0.00 0.00 38.74 6.13
1546 2583 3.134804 ACATGTCACTTATAGGTCAGCCC 59.865 47.826 0.00 0.00 34.57 5.19
1547 2584 4.141937 TGACATGTCACTTATAGGTCAGCC 60.142 45.833 24.56 0.00 35.45 4.85
1548 2585 5.011090 TGACATGTCACTTATAGGTCAGC 57.989 43.478 24.56 0.00 35.45 4.26
1561 2598 4.940654 TGAGTCAGTTTTTGTGACATGTCA 59.059 37.500 24.56 24.56 45.76 3.58
1562 2599 5.266242 GTGAGTCAGTTTTTGTGACATGTC 58.734 41.667 19.27 19.27 45.76 3.06
1563 2600 4.096382 GGTGAGTCAGTTTTTGTGACATGT 59.904 41.667 0.00 0.00 45.76 3.21
1564 2601 4.498009 GGGTGAGTCAGTTTTTGTGACATG 60.498 45.833 6.05 0.00 45.76 3.21
1565 2602 3.632145 GGGTGAGTCAGTTTTTGTGACAT 59.368 43.478 6.05 0.00 45.76 3.06
1566 2603 3.013921 GGGTGAGTCAGTTTTTGTGACA 58.986 45.455 6.05 0.00 45.76 3.58
1567 2604 2.031683 CGGGTGAGTCAGTTTTTGTGAC 59.968 50.000 0.00 0.00 44.02 3.67
1568 2605 2.285083 CGGGTGAGTCAGTTTTTGTGA 58.715 47.619 0.00 0.00 0.00 3.58
1569 2606 1.333619 CCGGGTGAGTCAGTTTTTGTG 59.666 52.381 0.00 0.00 0.00 3.33
1570 2607 1.675552 CCGGGTGAGTCAGTTTTTGT 58.324 50.000 0.00 0.00 0.00 2.83
1571 2608 0.951558 CCCGGGTGAGTCAGTTTTTG 59.048 55.000 14.18 0.00 0.00 2.44
1572 2609 0.822121 GCCCGGGTGAGTCAGTTTTT 60.822 55.000 24.63 0.00 0.00 1.94
1573 2610 1.228154 GCCCGGGTGAGTCAGTTTT 60.228 57.895 24.63 0.00 0.00 2.43
1574 2611 2.430367 GCCCGGGTGAGTCAGTTT 59.570 61.111 24.63 0.00 0.00 2.66
1575 2612 4.003788 CGCCCGGGTGAGTCAGTT 62.004 66.667 30.98 0.00 0.00 3.16
1588 2625 2.746277 ATGACGTTTGAGGCGCCC 60.746 61.111 26.15 15.80 0.00 6.13
1589 2626 2.480555 CATGACGTTTGAGGCGCC 59.519 61.111 21.89 21.89 0.00 6.53
1590 2627 1.852067 AACCATGACGTTTGAGGCGC 61.852 55.000 0.00 0.00 0.00 6.53
1591 2628 0.110238 CAACCATGACGTTTGAGGCG 60.110 55.000 0.00 0.00 0.00 5.52
1592 2629 0.951558 ACAACCATGACGTTTGAGGC 59.048 50.000 4.02 0.00 0.00 4.70
1593 2630 2.349438 CGAACAACCATGACGTTTGAGG 60.349 50.000 4.02 0.33 0.00 3.86
1594 2631 2.349438 CCGAACAACCATGACGTTTGAG 60.349 50.000 4.02 0.00 0.00 3.02
1595 2632 1.600013 CCGAACAACCATGACGTTTGA 59.400 47.619 4.02 0.00 0.00 2.69
1596 2633 1.924191 GCCGAACAACCATGACGTTTG 60.924 52.381 0.00 0.00 0.00 2.93
1597 2634 0.309612 GCCGAACAACCATGACGTTT 59.690 50.000 0.00 0.00 0.00 3.60
1598 2635 1.837538 CGCCGAACAACCATGACGTT 61.838 55.000 0.00 0.00 0.00 3.99
1599 2636 2.314647 CGCCGAACAACCATGACGT 61.315 57.895 0.00 0.00 0.00 4.34
1600 2637 2.222953 GACGCCGAACAACCATGACG 62.223 60.000 0.00 0.00 0.00 4.35
1601 2638 1.495951 GACGCCGAACAACCATGAC 59.504 57.895 0.00 0.00 0.00 3.06
1602 2639 1.669760 GGACGCCGAACAACCATGA 60.670 57.895 0.00 0.00 0.00 3.07
1603 2640 1.305219 ATGGACGCCGAACAACCATG 61.305 55.000 0.00 0.00 39.45 3.66
1604 2641 0.608035 AATGGACGCCGAACAACCAT 60.608 50.000 0.00 0.00 42.17 3.55
1605 2642 0.035036 TAATGGACGCCGAACAACCA 59.965 50.000 0.00 0.00 35.09 3.67
1606 2643 1.375551 ATAATGGACGCCGAACAACC 58.624 50.000 0.00 0.00 0.00 3.77
1607 2644 3.185797 GGATATAATGGACGCCGAACAAC 59.814 47.826 0.00 0.00 0.00 3.32
1608 2645 3.181464 TGGATATAATGGACGCCGAACAA 60.181 43.478 0.00 0.00 0.00 2.83
1609 2646 2.365941 TGGATATAATGGACGCCGAACA 59.634 45.455 0.00 0.00 0.00 3.18
1610 2647 2.993899 CTGGATATAATGGACGCCGAAC 59.006 50.000 0.00 0.00 0.00 3.95
1611 2648 2.611971 GCTGGATATAATGGACGCCGAA 60.612 50.000 0.00 0.00 0.00 4.30
1612 2649 1.067142 GCTGGATATAATGGACGCCGA 60.067 52.381 0.00 0.00 0.00 5.54
1613 2650 1.359848 GCTGGATATAATGGACGCCG 58.640 55.000 0.00 0.00 0.00 6.46
1614 2651 1.679032 GGGCTGGATATAATGGACGCC 60.679 57.143 0.00 0.00 35.63 5.68
1615 2652 1.003118 TGGGCTGGATATAATGGACGC 59.997 52.381 0.00 0.00 0.00 5.19
1616 2653 3.417069 TTGGGCTGGATATAATGGACG 57.583 47.619 0.00 0.00 0.00 4.79
1617 2654 6.322201 CCATATTTGGGCTGGATATAATGGAC 59.678 42.308 0.00 0.00 39.56 4.02
1618 2655 6.434302 CCATATTTGGGCTGGATATAATGGA 58.566 40.000 0.00 0.00 39.56 3.41
1619 2656 6.720112 CCATATTTGGGCTGGATATAATGG 57.280 41.667 0.00 0.00 39.56 3.16
1633 2670 1.972795 CCCAGATTGCCCCATATTTGG 59.027 52.381 0.00 0.00 43.23 3.28
1634 2671 1.345415 GCCCAGATTGCCCCATATTTG 59.655 52.381 0.00 0.00 0.00 2.32
1635 2672 1.720781 GCCCAGATTGCCCCATATTT 58.279 50.000 0.00 0.00 0.00 1.40
1636 2673 0.540365 CGCCCAGATTGCCCCATATT 60.540 55.000 0.00 0.00 0.00 1.28
1637 2674 1.075482 CGCCCAGATTGCCCCATAT 59.925 57.895 0.00 0.00 0.00 1.78
1638 2675 2.515398 CGCCCAGATTGCCCCATA 59.485 61.111 0.00 0.00 0.00 2.74
1645 2682 3.499737 GTGGACGCGCCCAGATTG 61.500 66.667 16.73 0.00 36.78 2.67
1646 2683 4.778143 GGTGGACGCGCCCAGATT 62.778 66.667 16.73 0.00 36.78 2.40
1661 2698 4.008933 GAGGCAGCCTGACGTGGT 62.009 66.667 22.26 0.00 31.76 4.16
1662 2699 4.007644 TGAGGCAGCCTGACGTGG 62.008 66.667 22.26 0.00 31.76 4.94
1663 2700 2.740055 GTGAGGCAGCCTGACGTG 60.740 66.667 22.26 0.00 31.76 4.49
1671 2708 4.459089 GGGTCGAGGTGAGGCAGC 62.459 72.222 0.00 0.00 0.00 5.25
1673 2710 4.631740 TGGGGTCGAGGTGAGGCA 62.632 66.667 0.00 0.00 0.00 4.75
1675 2712 0.686441 TATGTGGGGTCGAGGTGAGG 60.686 60.000 0.00 0.00 0.00 3.86
1677 2714 2.759839 TATATGTGGGGTCGAGGTGA 57.240 50.000 0.00 0.00 0.00 4.02
1682 2719 3.170717 GAGGGAATATATGTGGGGTCGA 58.829 50.000 0.00 0.00 0.00 4.20
1689 2726 7.905265 AGAGTTCATCAGAGGGAATATATGTG 58.095 38.462 0.00 0.00 0.00 3.21
1698 2735 3.513119 CAGTGAAGAGTTCATCAGAGGGA 59.487 47.826 0.00 0.00 42.47 4.20
1699 2736 3.859443 CAGTGAAGAGTTCATCAGAGGG 58.141 50.000 0.00 0.00 42.47 4.30
1700 2737 3.260740 GCAGTGAAGAGTTCATCAGAGG 58.739 50.000 0.00 0.00 42.47 3.69
1701 2738 3.922910 TGCAGTGAAGAGTTCATCAGAG 58.077 45.455 0.00 0.00 42.47 3.35
1704 2741 4.005650 GGATTGCAGTGAAGAGTTCATCA 58.994 43.478 0.00 0.00 42.47 3.07
1712 2749 2.224281 ACTGAACGGATTGCAGTGAAGA 60.224 45.455 0.00 0.00 41.02 2.87
1715 2752 1.608025 GGACTGAACGGATTGCAGTGA 60.608 52.381 0.00 0.00 42.47 3.41
1716 2753 0.798776 GGACTGAACGGATTGCAGTG 59.201 55.000 0.00 0.00 42.47 3.66
1719 2756 0.396435 AGTGGACTGAACGGATTGCA 59.604 50.000 0.00 0.00 0.00 4.08
1720 2757 1.079503 GAGTGGACTGAACGGATTGC 58.920 55.000 0.00 0.00 0.00 3.56
1721 2758 1.001974 TGGAGTGGACTGAACGGATTG 59.998 52.381 0.00 0.00 0.00 2.67
1722 2759 1.002087 GTGGAGTGGACTGAACGGATT 59.998 52.381 0.00 0.00 0.00 3.01
1723 2760 0.608640 GTGGAGTGGACTGAACGGAT 59.391 55.000 0.00 0.00 0.00 4.18
1724 2761 0.469331 AGTGGAGTGGACTGAACGGA 60.469 55.000 0.00 0.00 0.00 4.69
1725 2762 0.038159 GAGTGGAGTGGACTGAACGG 60.038 60.000 0.00 0.00 0.00 4.44
1726 2763 0.962489 AGAGTGGAGTGGACTGAACG 59.038 55.000 0.00 0.00 0.00 3.95
1727 2764 2.243810 AGAGAGTGGAGTGGACTGAAC 58.756 52.381 0.00 0.00 0.00 3.18
1728 2765 2.685106 AGAGAGTGGAGTGGACTGAA 57.315 50.000 0.00 0.00 0.00 3.02
1740 2777 3.804036 AGACGAGAGGACATAGAGAGTG 58.196 50.000 0.00 0.00 0.00 3.51
1744 2781 2.882137 GGGAAGACGAGAGGACATAGAG 59.118 54.545 0.00 0.00 0.00 2.43
1747 2784 2.820728 TGGGAAGACGAGAGGACATA 57.179 50.000 0.00 0.00 0.00 2.29
1748 2785 1.938585 TTGGGAAGACGAGAGGACAT 58.061 50.000 0.00 0.00 0.00 3.06
1749 2786 1.825474 GATTGGGAAGACGAGAGGACA 59.175 52.381 0.00 0.00 0.00 4.02
1750 2787 1.137282 GGATTGGGAAGACGAGAGGAC 59.863 57.143 0.00 0.00 0.00 3.85
1751 2788 1.273041 TGGATTGGGAAGACGAGAGGA 60.273 52.381 0.00 0.00 0.00 3.71
1752 2789 1.195115 TGGATTGGGAAGACGAGAGG 58.805 55.000 0.00 0.00 0.00 3.69
1753 2790 2.224161 GGATGGATTGGGAAGACGAGAG 60.224 54.545 0.00 0.00 0.00 3.20
1754 2791 1.762957 GGATGGATTGGGAAGACGAGA 59.237 52.381 0.00 0.00 0.00 4.04
1755 2792 1.765314 AGGATGGATTGGGAAGACGAG 59.235 52.381 0.00 0.00 0.00 4.18
1756 2793 1.762957 GAGGATGGATTGGGAAGACGA 59.237 52.381 0.00 0.00 0.00 4.20
1757 2794 1.765314 AGAGGATGGATTGGGAAGACG 59.235 52.381 0.00 0.00 0.00 4.18
1758 2795 3.457749 AGAAGAGGATGGATTGGGAAGAC 59.542 47.826 0.00 0.00 0.00 3.01
1759 2796 3.713764 GAGAAGAGGATGGATTGGGAAGA 59.286 47.826 0.00 0.00 0.00 2.87
1760 2797 3.715834 AGAGAAGAGGATGGATTGGGAAG 59.284 47.826 0.00 0.00 0.00 3.46
1761 2798 3.740780 AGAGAAGAGGATGGATTGGGAA 58.259 45.455 0.00 0.00 0.00 3.97
1762 2799 3.428063 AGAGAAGAGGATGGATTGGGA 57.572 47.619 0.00 0.00 0.00 4.37
1763 2800 3.181446 GGAAGAGAAGAGGATGGATTGGG 60.181 52.174 0.00 0.00 0.00 4.12
1764 2801 3.457380 TGGAAGAGAAGAGGATGGATTGG 59.543 47.826 0.00 0.00 0.00 3.16
1765 2802 4.767578 TGGAAGAGAAGAGGATGGATTG 57.232 45.455 0.00 0.00 0.00 2.67
1766 2803 5.786121 TTTGGAAGAGAAGAGGATGGATT 57.214 39.130 0.00 0.00 0.00 3.01
1767 2804 5.163109 GGATTTGGAAGAGAAGAGGATGGAT 60.163 44.000 0.00 0.00 0.00 3.41
1786 2823 2.112190 GGAAGAGGAGAGGACGGATTT 58.888 52.381 0.00 0.00 0.00 2.17
1833 2892 2.515523 CATTGGAGCCAGAGCCGG 60.516 66.667 0.00 0.00 41.25 6.13
1851 2910 1.429927 ATCGATGTCGCTCTCGTCGT 61.430 55.000 0.00 0.00 42.55 4.34
1872 2931 3.879912 GCAATGTGCAGAGCAACTT 57.120 47.368 0.00 0.00 44.26 2.66
1979 3038 2.358372 GCCCGGCAAATTCACCCAT 61.358 57.895 3.91 0.00 0.00 4.00
2003 3062 2.358615 GGTGATGTGCGCCAGACA 60.359 61.111 4.18 2.45 46.72 3.41
2016 3075 3.625897 CAGTGCTCCCACCGGTGA 61.626 66.667 36.07 16.25 43.09 4.02
2038 3102 3.549433 TACCTGGAGTGGGGCGGAA 62.549 63.158 0.00 0.00 0.00 4.30
2071 3136 3.635373 TCGGAGGTACAATAGATGTGGTC 59.365 47.826 0.00 0.00 43.77 4.02
2214 3284 2.034066 CCAACACATCGCCCACCT 59.966 61.111 0.00 0.00 0.00 4.00
2327 3411 4.662961 CCGCCATAGCCATCGCGA 62.663 66.667 13.09 13.09 43.46 5.87
2399 3487 4.752879 CTTTCCCGCCGCCTTCGA 62.753 66.667 0.00 0.00 38.10 3.71
2412 3500 1.362406 CCTCCTCGCTTTCGCCTTTC 61.362 60.000 0.00 0.00 35.26 2.62
2413 3501 1.376037 CCTCCTCGCTTTCGCCTTT 60.376 57.895 0.00 0.00 35.26 3.11
2414 3502 2.266055 CCTCCTCGCTTTCGCCTT 59.734 61.111 0.00 0.00 35.26 4.35
2415 3503 4.459089 GCCTCCTCGCTTTCGCCT 62.459 66.667 0.00 0.00 35.26 5.52
2506 3594 3.526931 TCGTTGTCAGAGATTGATCCC 57.473 47.619 0.00 0.00 38.29 3.85
2518 3607 0.319211 GGTCGTGGTCATCGTTGTCA 60.319 55.000 0.00 0.00 0.00 3.58
2522 3614 1.590147 GAGGGTCGTGGTCATCGTT 59.410 57.895 0.00 0.00 0.00 3.85
2556 3651 1.301165 CTGCTTTGGCCTTTGGTGC 60.301 57.895 3.32 0.35 37.74 5.01
2561 3656 2.859981 CGGTGCTGCTTTGGCCTTT 61.860 57.895 3.32 0.00 37.74 3.11
2662 3769 5.122519 TGCAGTTTCAATCAGACAGTAACA 58.877 37.500 0.00 0.00 0.00 2.41
2664 3771 6.233434 AGATGCAGTTTCAATCAGACAGTAA 58.767 36.000 0.00 0.00 0.00 2.24
2721 3828 6.980397 CACCAAATCTAGTTAAATTGGGCATC 59.020 38.462 7.65 0.00 43.77 3.91
2766 3876 8.692110 ACACATGCATGTATGAAAATAAACTG 57.308 30.769 30.92 15.84 39.39 3.16
2799 3909 8.759641 GTGTATCTCAAATCTGACATCACATAC 58.240 37.037 0.00 0.00 0.00 2.39
2846 3956 0.394565 GCACTGACCAGACACTCCTT 59.605 55.000 3.76 0.00 0.00 3.36
2854 3964 3.625897 CCGTGGGCACTGACCAGA 61.626 66.667 2.86 0.00 43.97 3.86
2875 3985 2.403252 AATCCGATCCTTCAAACGCT 57.597 45.000 0.00 0.00 0.00 5.07
2879 3989 5.500234 AGACATCAAATCCGATCCTTCAAA 58.500 37.500 0.00 0.00 0.00 2.69
2882 3992 5.118990 TGAAGACATCAAATCCGATCCTTC 58.881 41.667 0.00 0.00 34.30 3.46
2888 3998 3.264947 CTGCTGAAGACATCAAATCCGA 58.735 45.455 0.00 0.00 37.67 4.55
2919 4032 6.201226 ACTACTGCATGATATCGTAGATGG 57.799 41.667 16.82 0.00 45.12 3.51
2920 4033 6.902417 CGTACTACTGCATGATATCGTAGATG 59.098 42.308 16.82 8.46 45.12 2.90
2921 4034 6.594547 ACGTACTACTGCATGATATCGTAGAT 59.405 38.462 16.82 7.72 45.12 1.98
2922 4035 5.930569 ACGTACTACTGCATGATATCGTAGA 59.069 40.000 16.82 0.04 45.75 2.59
2923 4036 6.166911 ACGTACTACTGCATGATATCGTAG 57.833 41.667 0.00 11.15 35.05 3.51
2924 4037 7.763071 AGATACGTACTACTGCATGATATCGTA 59.237 37.037 0.00 11.42 35.27 3.43
2925 4038 6.594547 AGATACGTACTACTGCATGATATCGT 59.405 38.462 0.00 0.00 0.00 3.73
2926 4039 7.006187 AGATACGTACTACTGCATGATATCG 57.994 40.000 0.00 0.00 0.00 2.92
2927 4040 8.237949 ACAAGATACGTACTACTGCATGATATC 58.762 37.037 0.00 0.00 0.00 1.63
2928 4041 8.112016 ACAAGATACGTACTACTGCATGATAT 57.888 34.615 0.00 0.00 0.00 1.63
2929 4042 7.506328 ACAAGATACGTACTACTGCATGATA 57.494 36.000 0.00 0.00 0.00 2.15
2930 4043 6.392625 ACAAGATACGTACTACTGCATGAT 57.607 37.500 0.00 0.00 0.00 2.45
2931 4044 5.830000 ACAAGATACGTACTACTGCATGA 57.170 39.130 0.00 0.00 0.00 3.07
2932 4045 6.142480 GCTTACAAGATACGTACTACTGCATG 59.858 42.308 0.00 0.00 0.00 4.06
2933 4046 6.207213 GCTTACAAGATACGTACTACTGCAT 58.793 40.000 0.00 0.00 0.00 3.96
2934 4047 5.449588 GGCTTACAAGATACGTACTACTGCA 60.450 44.000 0.00 0.00 0.00 4.41
2935 4048 4.974888 GGCTTACAAGATACGTACTACTGC 59.025 45.833 0.00 0.00 0.00 4.40
2936 4049 6.374565 AGGCTTACAAGATACGTACTACTG 57.625 41.667 0.00 0.00 0.00 2.74
2937 4050 7.094032 ACAAAGGCTTACAAGATACGTACTACT 60.094 37.037 0.00 0.00 0.00 2.57
2938 4051 7.031975 ACAAAGGCTTACAAGATACGTACTAC 58.968 38.462 0.00 0.00 0.00 2.73
2939 4052 7.161773 ACAAAGGCTTACAAGATACGTACTA 57.838 36.000 0.00 0.00 0.00 1.82
2940 4053 6.034161 ACAAAGGCTTACAAGATACGTACT 57.966 37.500 0.00 0.00 0.00 2.73
2941 4054 7.816945 TTACAAAGGCTTACAAGATACGTAC 57.183 36.000 0.00 0.00 0.00 3.67
2942 4055 7.010738 GCATTACAAAGGCTTACAAGATACGTA 59.989 37.037 0.00 0.00 0.00 3.57
2943 4056 6.183360 GCATTACAAAGGCTTACAAGATACGT 60.183 38.462 0.00 0.00 0.00 3.57
2944 4057 6.183360 TGCATTACAAAGGCTTACAAGATACG 60.183 38.462 0.00 0.00 0.00 3.06
3051 4183 4.799564 TTCACAGTTGGCTTGACTTTTT 57.200 36.364 0.00 0.00 0.00 1.94
3052 4184 4.685924 CATTCACAGTTGGCTTGACTTTT 58.314 39.130 0.00 0.00 0.00 2.27
3053 4185 3.491447 GCATTCACAGTTGGCTTGACTTT 60.491 43.478 0.00 0.00 0.00 2.66
3054 4186 2.035066 GCATTCACAGTTGGCTTGACTT 59.965 45.455 0.00 0.00 0.00 3.01
3055 4187 1.610522 GCATTCACAGTTGGCTTGACT 59.389 47.619 0.00 0.00 0.00 3.41
3056 4188 1.336240 GGCATTCACAGTTGGCTTGAC 60.336 52.381 0.00 0.00 35.67 3.18
3057 4189 0.961019 GGCATTCACAGTTGGCTTGA 59.039 50.000 0.00 0.00 35.67 3.02
3058 4190 0.675083 TGGCATTCACAGTTGGCTTG 59.325 50.000 0.00 0.00 39.04 4.01
3059 4191 1.069049 GTTGGCATTCACAGTTGGCTT 59.931 47.619 0.00 0.00 39.04 4.35
3060 4192 0.675633 GTTGGCATTCACAGTTGGCT 59.324 50.000 0.00 0.00 39.04 4.75
3061 4193 0.388659 TGTTGGCATTCACAGTTGGC 59.611 50.000 0.00 0.00 38.77 4.52
3062 4194 1.408340 TGTGTTGGCATTCACAGTTGG 59.592 47.619 17.70 0.00 39.23 3.77
3063 4195 2.867287 TGTGTTGGCATTCACAGTTG 57.133 45.000 17.70 0.00 39.23 3.16
3064 4196 5.726980 ATAATGTGTTGGCATTCACAGTT 57.273 34.783 23.19 19.22 45.56 3.16
3065 4197 5.709631 TGTATAATGTGTTGGCATTCACAGT 59.290 36.000 23.03 22.62 45.56 3.55
3066 4198 6.029607 GTGTATAATGTGTTGGCATTCACAG 58.970 40.000 23.03 0.00 45.56 3.66
3067 4199 5.105957 GGTGTATAATGTGTTGGCATTCACA 60.106 40.000 21.74 21.74 46.23 3.58
3068 4200 5.105957 TGGTGTATAATGTGTTGGCATTCAC 60.106 40.000 13.81 13.81 39.50 3.18
3069 4201 5.012893 TGGTGTATAATGTGTTGGCATTCA 58.987 37.500 0.00 0.00 39.50 2.57
3070 4202 5.574891 TGGTGTATAATGTGTTGGCATTC 57.425 39.130 0.00 0.00 39.50 2.67
3071 4203 6.339730 CAATGGTGTATAATGTGTTGGCATT 58.660 36.000 0.00 0.00 41.42 3.56
3072 4204 5.681954 GCAATGGTGTATAATGTGTTGGCAT 60.682 40.000 0.00 0.00 0.00 4.40
3073 4205 4.381398 GCAATGGTGTATAATGTGTTGGCA 60.381 41.667 0.00 0.00 0.00 4.92
3074 4206 4.111916 GCAATGGTGTATAATGTGTTGGC 58.888 43.478 0.00 0.00 0.00 4.52
3075 4207 4.681744 GGCAATGGTGTATAATGTGTTGG 58.318 43.478 0.00 0.00 0.00 3.77
3087 4225 0.107508 CCATCTCTCGGCAATGGTGT 60.108 55.000 0.00 0.00 36.10 4.16
3090 4228 1.228063 CCCCATCTCTCGGCAATGG 60.228 63.158 0.00 0.00 39.76 3.16
3091 4229 0.181114 TTCCCCATCTCTCGGCAATG 59.819 55.000 0.00 0.00 0.00 2.82
3092 4230 0.918983 TTTCCCCATCTCTCGGCAAT 59.081 50.000 0.00 0.00 0.00 3.56
3093 4231 0.918983 ATTTCCCCATCTCTCGGCAA 59.081 50.000 0.00 0.00 0.00 4.52
3094 4232 1.694150 CTATTTCCCCATCTCTCGGCA 59.306 52.381 0.00 0.00 0.00 5.69
3095 4233 1.694696 ACTATTTCCCCATCTCTCGGC 59.305 52.381 0.00 0.00 0.00 5.54
3140 4279 9.571810 GAGCATGTTCACATTATCATTTTTGTA 57.428 29.630 4.47 0.00 33.61 2.41
3145 4284 6.406177 GGTGGAGCATGTTCACATTATCATTT 60.406 38.462 11.93 0.00 33.61 2.32
3219 4373 2.762327 GTCCTTGGTCCGTCACCTATAA 59.238 50.000 2.68 0.00 46.98 0.98
3222 4376 0.178955 TGTCCTTGGTCCGTCACCTA 60.179 55.000 2.68 0.00 46.98 3.08
3225 4379 0.179067 TTGTGTCCTTGGTCCGTCAC 60.179 55.000 0.00 0.00 0.00 3.67
3236 4395 3.181476 GCAACATTCAGGTTTTGTGTCCT 60.181 43.478 0.00 0.00 33.96 3.85
3269 4431 4.954202 ACTCCCTCACAGTATTATGTTCGA 59.046 41.667 0.00 0.00 0.00 3.71
3276 4438 3.116096 AGCCACTCCCTCACAGTATTA 57.884 47.619 0.00 0.00 0.00 0.98
3280 4442 0.616111 CCTAGCCACTCCCTCACAGT 60.616 60.000 0.00 0.00 0.00 3.55
3293 4487 3.291497 AGGTGACTGTCTCCTAGCC 57.709 57.895 25.48 10.56 38.49 3.93
3306 4500 4.648762 TGCCTCTTCAAAAATTTCAGGTGA 59.351 37.500 0.00 0.00 0.00 4.02
3308 4502 5.612725 TTGCCTCTTCAAAAATTTCAGGT 57.387 34.783 0.00 0.00 0.00 4.00
3312 4506 7.406799 TTCGATTTGCCTCTTCAAAAATTTC 57.593 32.000 0.00 0.00 39.13 2.17
3313 4507 7.967890 ATTCGATTTGCCTCTTCAAAAATTT 57.032 28.000 0.00 0.00 39.13 1.82
3316 4510 6.748132 AGAATTCGATTTGCCTCTTCAAAAA 58.252 32.000 0.00 0.00 39.13 1.94
3319 4513 6.655003 AGTTAGAATTCGATTTGCCTCTTCAA 59.345 34.615 0.00 0.00 0.00 2.69
3320 4514 6.173339 AGTTAGAATTCGATTTGCCTCTTCA 58.827 36.000 0.00 0.00 0.00 3.02
3321 4515 6.670077 AGTTAGAATTCGATTTGCCTCTTC 57.330 37.500 0.00 0.00 0.00 2.87
3323 4517 6.881602 AGAAAGTTAGAATTCGATTTGCCTCT 59.118 34.615 0.00 0.00 0.00 3.69
3325 4519 8.738645 ATAGAAAGTTAGAATTCGATTTGCCT 57.261 30.769 0.00 0.00 0.00 4.75
3326 4520 8.831550 AGATAGAAAGTTAGAATTCGATTTGCC 58.168 33.333 0.00 0.00 0.00 4.52
3327 4521 9.856803 GAGATAGAAAGTTAGAATTCGATTTGC 57.143 33.333 0.00 0.00 0.00 3.68
3336 4530 9.442047 CCAACAGTTGAGATAGAAAGTTAGAAT 57.558 33.333 15.36 0.00 0.00 2.40
3351 4545 4.582869 TGGATCTTGATCCAACAGTTGAG 58.417 43.478 25.05 3.81 46.90 3.02
3376 4570 2.482142 CGTTGAAGATGGAGCCCTAGAC 60.482 54.545 0.00 0.00 0.00 2.59
3386 4580 2.411547 GCTGTTTCGACGTTGAAGATGG 60.412 50.000 17.41 10.69 0.00 3.51
3397 4591 3.542712 ACAATGTCATGCTGTTTCGAC 57.457 42.857 0.00 0.00 0.00 4.20
3405 4599 5.182760 GGAAGAAGAGAAACAATGTCATGCT 59.817 40.000 0.00 0.00 0.00 3.79
3435 4629 3.311048 GGGAAGAGAAAGATCGAACATGC 59.689 47.826 0.00 0.00 0.00 4.06
3436 4630 3.873952 GGGGAAGAGAAAGATCGAACATG 59.126 47.826 0.00 0.00 0.00 3.21
3482 4676 2.281761 GTGGTGGCTGGTGGTCTG 60.282 66.667 0.00 0.00 0.00 3.51
3553 4747 2.097466 GCCGATAGTGGACATTGGTTTG 59.903 50.000 0.00 0.00 30.53 2.93
3554 4748 2.026262 AGCCGATAGTGGACATTGGTTT 60.026 45.455 0.00 0.00 30.53 3.27
3560 4754 0.105593 CTGCAGCCGATAGTGGACAT 59.894 55.000 0.00 0.00 0.00 3.06
3585 4779 3.701454 GCTAGAGGGATAGCCGGG 58.299 66.667 2.18 0.00 41.96 5.73
3591 4785 1.155390 CACCGGGGCTAGAGGGATA 59.845 63.158 6.32 0.00 0.00 2.59
3605 4799 0.804989 GGAAAAGCTGACCATCACCG 59.195 55.000 0.00 0.00 0.00 4.94
3608 4802 1.808411 GTCGGAAAAGCTGACCATCA 58.192 50.000 0.00 0.00 45.38 3.07
3616 4810 1.228657 GCAGGTTCGTCGGAAAAGCT 61.229 55.000 0.00 1.50 33.05 3.74
3618 4812 0.234884 GTGCAGGTTCGTCGGAAAAG 59.765 55.000 0.00 0.00 33.05 2.27
3623 4818 3.041940 GTGGTGCAGGTTCGTCGG 61.042 66.667 0.00 0.00 0.00 4.79
3626 4821 4.265056 GGGGTGGTGCAGGTTCGT 62.265 66.667 0.00 0.00 0.00 3.85
3656 4852 1.608283 GCAGGCGACCCCAATATCTAC 60.608 57.143 0.00 0.00 35.39 2.59
3697 4900 4.157120 ATACGGTGGCAGGCGACC 62.157 66.667 14.60 14.60 40.72 4.79
3698 4901 2.644555 ATCATACGGTGGCAGGCGAC 62.645 60.000 0.00 0.00 0.00 5.19
3700 4903 0.249699 TTATCATACGGTGGCAGGCG 60.250 55.000 0.00 0.00 0.00 5.52
3701 4904 1.602377 GTTTATCATACGGTGGCAGGC 59.398 52.381 0.00 0.00 0.00 4.85
3704 4907 3.055021 TCAAGGTTTATCATACGGTGGCA 60.055 43.478 0.00 0.00 0.00 4.92
3705 4908 3.537580 TCAAGGTTTATCATACGGTGGC 58.462 45.455 0.00 0.00 0.00 5.01
3706 4909 4.127171 CCTCAAGGTTTATCATACGGTGG 58.873 47.826 0.00 0.00 0.00 4.61
3707 4910 4.127171 CCCTCAAGGTTTATCATACGGTG 58.873 47.826 0.00 0.00 0.00 4.94
3709 4912 3.139077 GCCCTCAAGGTTTATCATACGG 58.861 50.000 0.00 0.00 38.26 4.02
3712 4915 5.930135 GAGAAGCCCTCAAGGTTTATCATA 58.070 41.667 0.00 0.00 44.16 2.15
3714 4917 4.222124 GAGAAGCCCTCAAGGTTTATCA 57.778 45.455 0.00 0.00 44.16 2.15
3736 4939 1.202818 AGGGAAAGAAGAAGCACGCTT 60.203 47.619 3.43 3.43 39.23 4.68
3737 4940 0.398318 AGGGAAAGAAGAAGCACGCT 59.602 50.000 0.00 0.00 0.00 5.07
3738 4941 0.799393 GAGGGAAAGAAGAAGCACGC 59.201 55.000 0.00 0.00 0.00 5.34
3761 4964 3.984292 GCATGAAGCAAGGAACTCG 57.016 52.632 0.00 0.00 44.79 4.18
3773 4997 4.527427 TGGATCAGTCAAATTTGGCATGAA 59.473 37.500 23.86 7.14 34.61 2.57
3777 5001 4.952071 TTTGGATCAGTCAAATTTGGCA 57.048 36.364 23.86 5.42 34.61 4.92
3793 5017 1.742831 CGCCTGAATTCGGAATTTGGA 59.257 47.619 26.36 12.48 31.01 3.53
3798 5022 2.403252 AAGTCGCCTGAATTCGGAAT 57.597 45.000 16.17 0.00 0.00 3.01
3802 5026 5.061064 GCTATATGTAAGTCGCCTGAATTCG 59.939 44.000 0.04 0.00 33.81 3.34
3803 5027 6.159988 AGCTATATGTAAGTCGCCTGAATTC 58.840 40.000 0.00 0.00 33.81 2.17
3831 5055 7.201359 CGTCACTATAACTCATCACAGTTTCAC 60.201 40.741 0.00 0.00 37.75 3.18
3839 5063 4.913335 TCCCGTCACTATAACTCATCAC 57.087 45.455 0.00 0.00 0.00 3.06
3894 5380 3.102204 GGTAGCCTGGTTGGTAAGAGTA 58.898 50.000 0.00 0.00 38.35 2.59
3900 5386 1.447099 TTTGGGTAGCCTGGTTGGTA 58.553 50.000 13.11 0.00 38.35 3.25
3918 5404 3.945346 TGTACAAGGTGTGTGTGTCTTT 58.055 40.909 0.00 0.00 41.89 2.52
3952 5453 5.303333 TGACGATGATATTGTAGGCAACCTA 59.697 40.000 0.00 0.00 37.44 3.08
3997 5498 2.296471 CGTCCACAGTGAAGTAGGAGTT 59.704 50.000 0.62 0.00 0.00 3.01
4003 5504 1.991121 AGGTCGTCCACAGTGAAGTA 58.009 50.000 0.62 0.00 35.89 2.24
4011 5512 1.254026 CTCTTGGTAGGTCGTCCACA 58.746 55.000 0.51 0.00 35.89 4.17
4034 5535 3.414269 TCTTTCATGCTGCTCATTGTGA 58.586 40.909 0.00 0.00 31.79 3.58
4040 5541 1.074405 AGGGTTCTTTCATGCTGCTCA 59.926 47.619 0.00 0.00 0.00 4.26
4041 5542 1.831580 AGGGTTCTTTCATGCTGCTC 58.168 50.000 0.00 0.00 0.00 4.26
4046 5547 2.024306 GCCCCTAGGGTTCTTTCATGC 61.024 57.143 26.66 14.97 46.51 4.06
4051 5552 1.495148 GCATAGCCCCTAGGGTTCTTT 59.505 52.381 26.66 14.43 46.51 2.52
4089 5591 2.371910 AGCTGTTTAGTCCTCGAAGC 57.628 50.000 0.00 0.00 0.00 3.86
4100 5602 2.553602 TGACCGAAGTCGTAGCTGTTTA 59.446 45.455 0.00 0.00 46.74 2.01
4109 5614 0.883814 AGACTCGTGACCGAAGTCGT 60.884 55.000 0.00 0.00 46.74 4.34
4169 5674 5.295950 CAACAATGCTTTGTGATGGGTAAA 58.704 37.500 17.71 0.00 45.30 2.01
4172 5677 3.389925 CAACAATGCTTTGTGATGGGT 57.610 42.857 17.71 0.00 45.30 4.51
4237 5748 4.278956 GACCGTTCGACATGCCTT 57.721 55.556 0.00 0.00 0.00 4.35
4257 5768 1.667830 CGTGGCATGTCCTTCGTGT 60.668 57.895 0.00 0.00 35.64 4.49
4295 5806 4.172505 GCATTTTTGTGGCAACGATGATA 58.827 39.130 0.00 0.00 42.51 2.15
4347 6404 4.069304 ACGGAATCACGAATTTTGAAGGA 58.931 39.130 0.00 0.00 37.61 3.36
4353 6410 4.755123 AGTTCTGACGGAATCACGAATTTT 59.245 37.500 0.00 0.00 36.24 1.82
4364 6421 6.097915 ACTCTTAATTCAGTTCTGACGGAA 57.902 37.500 1.72 0.00 42.66 4.30
4488 6560 2.420022 ACACGGTTGCATTTATCAGCTC 59.580 45.455 0.00 0.00 0.00 4.09
4599 6673 9.178427 GGAGATGTGAACGTATATACTTTGTAC 57.822 37.037 9.17 8.58 0.00 2.90
4604 6678 7.287005 TCCAAGGAGATGTGAACGTATATACTT 59.713 37.037 11.05 0.00 0.00 2.24
4606 6680 6.978338 TCCAAGGAGATGTGAACGTATATAC 58.022 40.000 2.53 2.53 0.00 1.47
4647 6721 3.945981 TGTTCCAACGTCTGCTACATA 57.054 42.857 0.00 0.00 0.00 2.29
4652 6816 2.037251 AGTGTATGTTCCAACGTCTGCT 59.963 45.455 0.00 0.00 0.00 4.24
4704 6871 1.592400 CCCTGACTGCATGCAAGTGG 61.592 60.000 22.88 19.20 0.00 4.00
4743 6911 4.647564 AAATCCTTCACTGACTGGACAT 57.352 40.909 2.89 0.00 0.00 3.06
4747 6915 8.143835 ACAAAATAAAAATCCTTCACTGACTGG 58.856 33.333 0.00 0.00 0.00 4.00
4790 6958 1.155042 CAGTGGCAGAGCTTTGACTC 58.845 55.000 11.98 7.90 36.91 3.36
4941 7666 6.092670 CACATTGTTGGAGAACATAATCGTCT 59.907 38.462 0.00 0.00 41.77 4.18
4942 7667 6.128282 ACACATTGTTGGAGAACATAATCGTC 60.128 38.462 0.00 0.00 41.77 4.20
4943 7668 5.705441 ACACATTGTTGGAGAACATAATCGT 59.295 36.000 0.00 0.00 41.77 3.73
4944 7669 6.182039 ACACATTGTTGGAGAACATAATCG 57.818 37.500 0.00 0.00 41.77 3.34
4945 7670 8.492673 TCTACACATTGTTGGAGAACATAATC 57.507 34.615 0.00 0.00 41.77 1.75
4985 7710 7.595130 CAGTTCCTAATTTGTGCTAACCTTTTC 59.405 37.037 0.00 0.00 0.00 2.29
4990 7715 4.380550 GCCAGTTCCTAATTTGTGCTAACC 60.381 45.833 0.00 0.00 0.00 2.85
5085 8106 1.070275 GGGAAGGTCGACACGGTTT 59.930 57.895 18.91 3.16 0.00 3.27
5203 8231 7.701445 ACTTTGATTGTTAGCTATCATTCTGC 58.299 34.615 19.76 5.95 36.89 4.26
5233 8261 2.042464 TGGCATCGCTTAGAAGGATCT 58.958 47.619 0.00 0.00 39.82 2.75
5318 8365 4.645136 TGCTCAGTCGATTTATACAGACCT 59.355 41.667 0.00 0.00 34.41 3.85
5488 8586 4.966787 GGGCGGCAGGTTGTTGGA 62.967 66.667 12.47 0.00 0.00 3.53
5729 8827 2.280524 CGACCTTGTTGCCCACGA 60.281 61.111 0.00 0.00 0.00 4.35
5812 8910 2.550606 GTGCCGATTCTGTTACAAACCA 59.449 45.455 0.00 0.00 0.00 3.67
5872 8970 2.254508 ACCGGTACTAAACAGCTCCTT 58.745 47.619 4.49 0.00 0.00 3.36
5880 8978 1.070821 GCCACGAACCGGTACTAAAC 58.929 55.000 8.00 0.00 0.00 2.01
5934 9032 2.708861 TCCTGCCACCACTTTCTTTAGA 59.291 45.455 0.00 0.00 0.00 2.10
6089 9193 3.156288 TGAACTCGAGAGGAAGAAGGA 57.844 47.619 21.68 0.00 0.00 3.36
6178 9282 5.684704 TGAGAGATGAAAGGACAAAGTTGT 58.315 37.500 0.00 0.00 45.65 3.32
6525 9629 3.243168 CGGATATCAAAACCATGGCACTG 60.243 47.826 13.04 6.43 0.00 3.66
6554 9658 1.968050 ATAACAAGGACGAGGGCCGG 61.968 60.000 0.00 0.00 43.93 6.13


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.