Multiple sequence alignment - TraesCS3B01G526800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G526800 chr3B 100.000 3008 0 0 1 3008 769057373 769054366 0.000000e+00 5555.0
1 TraesCS3B01G526800 chr3B 86.382 1263 102 28 896 2117 766631128 766632361 0.000000e+00 1315.0
2 TraesCS3B01G526800 chr3B 89.255 577 50 6 1475 2039 768904379 768903803 0.000000e+00 712.0
3 TraesCS3B01G526800 chr3B 98.454 194 3 0 2541 2734 769229230 769229037 2.870000e-90 342.0
4 TraesCS3B01G526800 chr3B 97.487 199 4 1 2538 2736 769152830 769153027 3.710000e-89 339.0
5 TraesCS3B01G526800 chr3B 96.172 209 5 3 2538 2745 769209086 769208880 3.710000e-89 339.0
6 TraesCS3B01G526800 chr3B 95.567 203 8 1 2542 2743 28111400 28111198 1.040000e-84 324.0
7 TraesCS3B01G526800 chrUn 97.730 793 16 2 1 791 117308692 117307900 0.000000e+00 1363.0
8 TraesCS3B01G526800 chrUn 92.991 214 14 1 2527 2740 76852834 76853046 8.100000e-81 311.0
9 TraesCS3B01G526800 chrUn 84.979 233 30 3 2781 3008 147950859 147950627 6.480000e-57 231.0
10 TraesCS3B01G526800 chrUn 83.621 232 34 3 2781 3008 69737253 69737022 6.530000e-52 215.0
11 TraesCS3B01G526800 chr6B 97.478 793 17 2 1 792 619534593 619533803 0.000000e+00 1351.0
12 TraesCS3B01G526800 chr6B 89.950 796 65 11 1 794 573628972 573629754 0.000000e+00 1013.0
13 TraesCS3B01G526800 chr6B 81.438 1196 140 42 992 2157 438386919 438385776 0.000000e+00 904.0
14 TraesCS3B01G526800 chr3D 85.358 1325 104 35 873 2138 575725715 575727008 0.000000e+00 1290.0
15 TraesCS3B01G526800 chr3D 87.188 960 93 20 1066 2009 577255781 577254836 0.000000e+00 1064.0
16 TraesCS3B01G526800 chr3D 91.654 659 53 1 1 659 581541448 581542104 0.000000e+00 911.0
17 TraesCS3B01G526800 chr3D 93.490 384 25 0 1416 1799 577264244 577263861 3.360000e-159 571.0
18 TraesCS3B01G526800 chr3D 93.750 368 12 7 2171 2536 577254129 577253771 2.640000e-150 542.0
19 TraesCS3B01G526800 chr3D 85.673 342 21 15 799 1125 577264711 577264383 4.800000e-88 335.0
20 TraesCS3B01G526800 chr3D 92.405 158 7 3 2013 2167 577254324 577254169 1.400000e-53 220.0
21 TraesCS3B01G526800 chr3D 86.667 75 7 2 796 867 575725613 575725687 2.490000e-11 80.5
22 TraesCS3B01G526800 chr5B 95.477 796 36 0 1 796 125424084 125423289 0.000000e+00 1271.0
23 TraesCS3B01G526800 chr5B 81.977 344 48 8 1673 2003 96764631 96764289 2.280000e-71 279.0
24 TraesCS3B01G526800 chr5B 86.134 238 26 5 2776 3008 677816706 677816941 1.790000e-62 250.0
25 TraesCS3B01G526800 chr2B 95.167 807 24 2 1 792 530694020 530694826 0.000000e+00 1260.0
26 TraesCS3B01G526800 chr3A 88.286 1050 79 21 1101 2140 711217945 711218960 0.000000e+00 1218.0
27 TraesCS3B01G526800 chr3A 87.946 1037 99 13 1101 2137 711203068 711204078 0.000000e+00 1199.0
28 TraesCS3B01G526800 chr3A 88.535 628 52 9 1473 2082 712571786 712571161 0.000000e+00 743.0
29 TraesCS3B01G526800 chr3A 85.762 597 55 18 1101 1679 712572376 712571792 3.320000e-169 604.0
30 TraesCS3B01G526800 chr3A 85.821 402 25 11 796 1167 711217570 711217969 6.040000e-107 398.0
31 TraesCS3B01G526800 chr3A 75.170 294 44 18 904 1171 711202806 711203096 8.810000e-21 111.0
32 TraesCS3B01G526800 chr1A 89.520 792 63 7 1 792 497749266 497748495 0.000000e+00 985.0
33 TraesCS3B01G526800 chr1A 91.210 694 54 2 103 796 540893960 540894646 0.000000e+00 937.0
34 TraesCS3B01G526800 chr1A 91.210 694 54 2 103 796 540915289 540915975 0.000000e+00 937.0
35 TraesCS3B01G526800 chr6D 81.757 1184 141 41 908 2052 276456975 276455828 0.000000e+00 920.0
36 TraesCS3B01G526800 chr6A 81.135 1198 135 48 992 2157 399721983 399723121 0.000000e+00 876.0
37 TraesCS3B01G526800 chr6A 96.891 193 6 0 2542 2734 11011849 11011657 1.040000e-84 324.0
38 TraesCS3B01G526800 chr6A 86.147 231 26 5 2781 3007 604511227 604511455 8.330000e-61 244.0
39 TraesCS3B01G526800 chr6A 84.483 232 31 4 2781 3008 395260602 395260372 1.090000e-54 224.0
40 TraesCS3B01G526800 chr4B 95.973 298 11 1 500 796 425817537 425817834 1.620000e-132 483.0
41 TraesCS3B01G526800 chr4B 97.794 136 3 0 654 789 334323479 334323344 5.010000e-58 235.0
42 TraesCS3B01G526800 chr4A 96.891 193 6 0 2542 2734 658241368 658241560 1.040000e-84 324.0
43 TraesCS3B01G526800 chr4A 96.410 195 7 0 2542 2736 658386494 658386300 3.740000e-84 322.0
44 TraesCS3B01G526800 chr5A 96.410 195 7 0 2542 2736 541477726 541477920 3.740000e-84 322.0
45 TraesCS3B01G526800 chr5A 82.319 345 45 9 1673 2003 85164426 85164084 4.910000e-73 285.0
46 TraesCS3B01G526800 chr5A 86.364 198 27 0 1183 1380 693674777 693674580 1.820000e-52 217.0
47 TraesCS3B01G526800 chr1D 86.192 239 27 5 2773 3007 67230878 67231114 1.380000e-63 254.0
48 TraesCS3B01G526800 chr1B 86.580 231 27 3 2781 3007 95777883 95778113 4.980000e-63 252.0
49 TraesCS3B01G526800 chr5D 84.120 233 27 8 2781 3006 296448126 296447897 1.820000e-52 217.0
50 TraesCS3B01G526800 chr7D 83.913 230 32 3 2781 3005 617536600 617536829 6.530000e-52 215.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G526800 chr3B 769054366 769057373 3007 True 5555.000000 5555 100.000000 1 3008 1 chr3B.!!$R3 3007
1 TraesCS3B01G526800 chr3B 766631128 766632361 1233 False 1315.000000 1315 86.382000 896 2117 1 chr3B.!!$F1 1221
2 TraesCS3B01G526800 chr3B 768903803 768904379 576 True 712.000000 712 89.255000 1475 2039 1 chr3B.!!$R2 564
3 TraesCS3B01G526800 chrUn 117307900 117308692 792 True 1363.000000 1363 97.730000 1 791 1 chrUn.!!$R2 790
4 TraesCS3B01G526800 chr6B 619533803 619534593 790 True 1351.000000 1351 97.478000 1 792 1 chr6B.!!$R2 791
5 TraesCS3B01G526800 chr6B 573628972 573629754 782 False 1013.000000 1013 89.950000 1 794 1 chr6B.!!$F1 793
6 TraesCS3B01G526800 chr6B 438385776 438386919 1143 True 904.000000 904 81.438000 992 2157 1 chr6B.!!$R1 1165
7 TraesCS3B01G526800 chr3D 581541448 581542104 656 False 911.000000 911 91.654000 1 659 1 chr3D.!!$F1 658
8 TraesCS3B01G526800 chr3D 575725613 575727008 1395 False 685.250000 1290 86.012500 796 2138 2 chr3D.!!$F2 1342
9 TraesCS3B01G526800 chr3D 577253771 577255781 2010 True 608.666667 1064 91.114333 1066 2536 3 chr3D.!!$R1 1470
10 TraesCS3B01G526800 chr3D 577263861 577264711 850 True 453.000000 571 89.581500 799 1799 2 chr3D.!!$R2 1000
11 TraesCS3B01G526800 chr5B 125423289 125424084 795 True 1271.000000 1271 95.477000 1 796 1 chr5B.!!$R2 795
12 TraesCS3B01G526800 chr2B 530694020 530694826 806 False 1260.000000 1260 95.167000 1 792 1 chr2B.!!$F1 791
13 TraesCS3B01G526800 chr3A 711217570 711218960 1390 False 808.000000 1218 87.053500 796 2140 2 chr3A.!!$F2 1344
14 TraesCS3B01G526800 chr3A 712571161 712572376 1215 True 673.500000 743 87.148500 1101 2082 2 chr3A.!!$R1 981
15 TraesCS3B01G526800 chr3A 711202806 711204078 1272 False 655.000000 1199 81.558000 904 2137 2 chr3A.!!$F1 1233
16 TraesCS3B01G526800 chr1A 497748495 497749266 771 True 985.000000 985 89.520000 1 792 1 chr1A.!!$R1 791
17 TraesCS3B01G526800 chr1A 540893960 540894646 686 False 937.000000 937 91.210000 103 796 1 chr1A.!!$F1 693
18 TraesCS3B01G526800 chr1A 540915289 540915975 686 False 937.000000 937 91.210000 103 796 1 chr1A.!!$F2 693
19 TraesCS3B01G526800 chr6D 276455828 276456975 1147 True 920.000000 920 81.757000 908 2052 1 chr6D.!!$R1 1144
20 TraesCS3B01G526800 chr6A 399721983 399723121 1138 False 876.000000 876 81.135000 992 2157 1 chr6A.!!$F1 1165

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
736 748 0.251916 CAACGGTGGCTGGGATTCTA 59.748 55.0 0.0 0.0 0.0 2.1 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2147 3174 0.10576 ATCCCAGTGGCGAGAGAGAT 60.106 55.0 2.61 0.0 0.0 2.75 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
38 39 2.945718 AGGAACACACCCCTGACTT 58.054 52.632 0.00 0.00 0.00 3.01
314 315 0.931702 CTAACGTGTGTGTTCGCCAA 59.068 50.000 0.00 0.00 33.32 4.52
462 463 2.353803 GCTTCTTACTCTCGGCCTTTGA 60.354 50.000 0.00 0.00 0.00 2.69
509 510 2.656651 CTTCGATGGCGCCTCTCG 60.657 66.667 32.60 32.60 42.12 4.04
736 748 0.251916 CAACGGTGGCTGGGATTCTA 59.748 55.000 0.00 0.00 0.00 2.10
796 812 4.089493 TCGTGCGTATTCGAGAAAAGAAAG 59.911 41.667 0.00 0.00 39.71 2.62
797 813 4.089493 CGTGCGTATTCGAGAAAAGAAAGA 59.911 41.667 0.00 0.00 39.71 2.52
833 849 3.382832 CGTCCGCTTCTCCACCCT 61.383 66.667 0.00 0.00 0.00 4.34
839 855 0.744874 CGCTTCTCCACCCTTCGATA 59.255 55.000 0.00 0.00 0.00 2.92
866 896 2.170607 TCCATCATTCCGTCCTTCCTTC 59.829 50.000 0.00 0.00 0.00 3.46
867 897 2.565841 CATCATTCCGTCCTTCCTTCC 58.434 52.381 0.00 0.00 0.00 3.46
868 898 1.651737 TCATTCCGTCCTTCCTTCCA 58.348 50.000 0.00 0.00 0.00 3.53
869 899 2.196595 TCATTCCGTCCTTCCTTCCAT 58.803 47.619 0.00 0.00 0.00 3.41
870 900 2.170607 TCATTCCGTCCTTCCTTCCATC 59.829 50.000 0.00 0.00 0.00 3.51
871 901 1.952621 TTCCGTCCTTCCTTCCATCT 58.047 50.000 0.00 0.00 0.00 2.90
877 922 3.702045 CGTCCTTCCTTCCATCTAGAAGT 59.298 47.826 0.00 0.00 41.45 3.01
879 924 4.712337 GTCCTTCCTTCCATCTAGAAGTCA 59.288 45.833 0.00 0.00 41.45 3.41
887 932 6.017770 CCTTCCATCTAGAAGTCACTACGTAG 60.018 46.154 20.97 20.97 41.45 3.51
888 933 4.815308 TCCATCTAGAAGTCACTACGTAGC 59.185 45.833 22.40 6.54 0.00 3.58
890 935 4.115401 TCTAGAAGTCACTACGTAGCGA 57.885 45.455 22.40 15.81 0.00 4.93
891 936 4.111198 TCTAGAAGTCACTACGTAGCGAG 58.889 47.826 22.40 12.54 0.00 5.03
893 938 1.129998 GAAGTCACTACGTAGCGAGCA 59.870 52.381 22.40 0.00 0.00 4.26
894 939 0.447011 AGTCACTACGTAGCGAGCAC 59.553 55.000 22.40 11.31 0.00 4.40
895 940 0.447011 GTCACTACGTAGCGAGCACT 59.553 55.000 22.40 0.00 0.00 4.40
896 941 1.662629 GTCACTACGTAGCGAGCACTA 59.337 52.381 22.40 0.00 0.00 2.74
897 942 2.094894 GTCACTACGTAGCGAGCACTAA 59.905 50.000 22.40 0.00 0.00 2.24
899 944 2.844804 CACTACGTAGCGAGCACTAAAC 59.155 50.000 22.40 0.00 0.00 2.01
906 952 0.951040 GCGAGCACTAAACCTGCTGT 60.951 55.000 0.00 0.00 45.23 4.40
946 1008 0.525761 CCAACGGCATTAACCACCAG 59.474 55.000 0.00 0.00 0.00 4.00
947 1009 1.529226 CAACGGCATTAACCACCAGA 58.471 50.000 0.00 0.00 0.00 3.86
948 1010 1.199097 CAACGGCATTAACCACCAGAC 59.801 52.381 0.00 0.00 0.00 3.51
949 1011 0.322187 ACGGCATTAACCACCAGACC 60.322 55.000 0.00 0.00 0.00 3.85
950 1012 1.029947 CGGCATTAACCACCAGACCC 61.030 60.000 0.00 0.00 0.00 4.46
983 1051 1.402259 CGATCAGTAACCAGCGAGACT 59.598 52.381 0.00 0.00 0.00 3.24
986 1054 3.345508 TCAGTAACCAGCGAGACTAGA 57.654 47.619 0.00 0.00 0.00 2.43
1016 1084 2.270205 CATGGCAGCGACCTCCTT 59.730 61.111 0.00 0.00 0.00 3.36
1193 1409 4.243008 TTCGGGCAGCACCAACGA 62.243 61.111 0.00 0.00 42.05 3.85
1404 1631 2.030363 CCGGCATTGCAGTTTAGTTGAA 60.030 45.455 11.39 0.00 0.00 2.69
1430 1658 0.039437 AGACAGTACGTGCTTGTCGG 60.039 55.000 20.99 8.03 34.97 4.79
1451 1683 3.181466 GGTTTGTTTGTCCAGCTCCAAAT 60.181 43.478 6.13 0.00 33.53 2.32
1488 1953 4.271661 TGGATTGTTGCATGCAGATAAGA 58.728 39.130 21.50 1.22 0.00 2.10
1497 1962 0.829990 TGCAGATAAGATGCGTGGGA 59.170 50.000 0.00 0.00 46.87 4.37
1587 2062 1.590147 CCGCTACCACTTCGACCTT 59.410 57.895 0.00 0.00 0.00 3.50
1683 2158 1.227853 GTTCAAGAGGGTGCCGTGT 60.228 57.895 0.00 0.00 0.00 4.49
1977 2472 4.388499 TGGAAGCCCGAAGCCGTC 62.388 66.667 0.00 0.00 45.47 4.79
2034 3051 0.749091 CGCTCATCCATGGAAGGCAA 60.749 55.000 20.67 0.00 0.00 4.52
2045 3062 0.392461 GGAAGGCAAGCACGTCCATA 60.392 55.000 9.36 0.00 36.64 2.74
2046 3063 0.727398 GAAGGCAAGCACGTCCATAC 59.273 55.000 0.00 0.00 0.00 2.39
2108 3125 1.154131 CTGAGACGTCGCCTGTGAG 60.154 63.158 16.94 3.05 0.00 3.51
2145 3172 1.640915 CGTCGTGTGCTAGTTTCGTAC 59.359 52.381 0.00 0.00 0.00 3.67
2147 3174 3.423515 CGTCGTGTGCTAGTTTCGTACTA 60.424 47.826 0.00 1.39 38.33 1.82
2158 3185 3.560896 AGTTTCGTACTATCTCTCTCGCC 59.439 47.826 0.00 0.00 34.56 5.54
2159 3186 2.904697 TCGTACTATCTCTCTCGCCA 57.095 50.000 0.00 0.00 0.00 5.69
2160 3187 2.481854 TCGTACTATCTCTCTCGCCAC 58.518 52.381 0.00 0.00 0.00 5.01
2161 3188 2.102757 TCGTACTATCTCTCTCGCCACT 59.897 50.000 0.00 0.00 0.00 4.00
2162 3189 2.222213 CGTACTATCTCTCTCGCCACTG 59.778 54.545 0.00 0.00 0.00 3.66
2163 3190 1.686355 ACTATCTCTCTCGCCACTGG 58.314 55.000 0.00 0.00 0.00 4.00
2164 3191 0.958091 CTATCTCTCTCGCCACTGGG 59.042 60.000 0.00 0.00 37.18 4.45
2165 3192 0.551396 TATCTCTCTCGCCACTGGGA 59.449 55.000 0.00 0.00 35.59 4.37
2166 3193 0.105760 ATCTCTCTCGCCACTGGGAT 60.106 55.000 0.00 0.00 35.59 3.85
2168 3195 2.025767 CTCTCTCGCCACTGGGATGG 62.026 65.000 0.00 0.00 43.26 3.51
2169 3196 3.083349 TCTCGCCACTGGGATGGG 61.083 66.667 0.00 0.00 40.43 4.00
2190 3256 0.037877 ATGGGGATGCATGCTAGCTC 59.962 55.000 20.33 7.97 34.99 4.09
2260 3326 6.413783 ACGTATTACACATGTATGGGATCA 57.586 37.500 0.00 0.00 34.60 2.92
2291 3357 2.213499 AGGCGACTGAAAAACTGTCTG 58.787 47.619 0.00 0.00 42.59 3.51
2292 3358 1.940613 GGCGACTGAAAAACTGTCTGT 59.059 47.619 0.00 0.00 42.59 3.41
2293 3359 2.286418 GGCGACTGAAAAACTGTCTGTG 60.286 50.000 0.00 0.00 42.59 3.66
2294 3360 2.351726 GCGACTGAAAAACTGTCTGTGT 59.648 45.455 0.00 0.00 42.59 3.72
2295 3361 3.785505 GCGACTGAAAAACTGTCTGTGTG 60.786 47.826 0.00 0.00 42.59 3.82
2296 3362 3.370978 CGACTGAAAAACTGTCTGTGTGT 59.629 43.478 0.00 0.00 42.59 3.72
2324 3390 4.393155 TCCGTGAGCCGCTGCATT 62.393 61.111 0.00 0.00 41.13 3.56
2346 3412 2.148768 GAAACGGACGGTTGGATCTTT 58.851 47.619 0.00 0.00 39.30 2.52
2414 3481 2.621668 GGGAAGCTTTGATACAAGGGCT 60.622 50.000 0.00 0.00 0.00 5.19
2452 3519 2.224606 TCGTCTGGAAGTCTACGTTGT 58.775 47.619 0.00 0.00 36.73 3.32
2462 3529 6.803320 TGGAAGTCTACGTTGTTAATACTTCG 59.197 38.462 16.34 0.00 41.28 3.79
2492 3559 4.199002 AGGAAACCACCTCCAATTTCTT 57.801 40.909 0.00 0.00 34.98 2.52
2536 3604 1.827399 GAACCGCCTCCACCTTCTGA 61.827 60.000 0.00 0.00 0.00 3.27
2537 3605 2.113243 AACCGCCTCCACCTTCTGAC 62.113 60.000 0.00 0.00 0.00 3.51
2538 3606 2.583441 CCGCCTCCACCTTCTGACA 61.583 63.158 0.00 0.00 0.00 3.58
2539 3607 1.374758 CGCCTCCACCTTCTGACAC 60.375 63.158 0.00 0.00 0.00 3.67
2540 3608 1.754745 GCCTCCACCTTCTGACACA 59.245 57.895 0.00 0.00 0.00 3.72
2541 3609 0.603975 GCCTCCACCTTCTGACACAC 60.604 60.000 0.00 0.00 0.00 3.82
2542 3610 0.758734 CCTCCACCTTCTGACACACA 59.241 55.000 0.00 0.00 0.00 3.72
2543 3611 1.140852 CCTCCACCTTCTGACACACAA 59.859 52.381 0.00 0.00 0.00 3.33
2544 3612 2.421388 CCTCCACCTTCTGACACACAAA 60.421 50.000 0.00 0.00 0.00 2.83
2545 3613 2.874701 CTCCACCTTCTGACACACAAAG 59.125 50.000 0.00 0.00 0.00 2.77
2546 3614 2.238646 TCCACCTTCTGACACACAAAGT 59.761 45.455 0.00 0.00 0.00 2.66
2547 3615 3.016736 CCACCTTCTGACACACAAAGTT 58.983 45.455 0.00 0.00 0.00 2.66
2548 3616 3.443681 CCACCTTCTGACACACAAAGTTT 59.556 43.478 0.00 0.00 0.00 2.66
2549 3617 4.082245 CCACCTTCTGACACACAAAGTTTT 60.082 41.667 0.00 0.00 0.00 2.43
2550 3618 5.124776 CCACCTTCTGACACACAAAGTTTTA 59.875 40.000 0.00 0.00 0.00 1.52
2551 3619 6.349777 CCACCTTCTGACACACAAAGTTTTAA 60.350 38.462 0.00 0.00 0.00 1.52
2552 3620 7.087639 CACCTTCTGACACACAAAGTTTTAAA 58.912 34.615 0.00 0.00 0.00 1.52
2553 3621 7.759433 CACCTTCTGACACACAAAGTTTTAAAT 59.241 33.333 0.00 0.00 0.00 1.40
2554 3622 8.962679 ACCTTCTGACACACAAAGTTTTAAATA 58.037 29.630 0.00 0.00 0.00 1.40
2555 3623 9.450807 CCTTCTGACACACAAAGTTTTAAATAG 57.549 33.333 0.00 0.00 0.00 1.73
2556 3624 8.850454 TTCTGACACACAAAGTTTTAAATAGC 57.150 30.769 0.00 0.00 0.00 2.97
2557 3625 7.129622 TCTGACACACAAAGTTTTAAATAGCG 58.870 34.615 0.00 0.00 0.00 4.26
2558 3626 5.683743 TGACACACAAAGTTTTAAATAGCGC 59.316 36.000 0.00 0.00 0.00 5.92
2559 3627 4.673311 ACACACAAAGTTTTAAATAGCGCG 59.327 37.500 0.00 0.00 0.00 6.86
2560 3628 3.666797 ACACAAAGTTTTAAATAGCGCGC 59.333 39.130 26.66 26.66 0.00 6.86
2561 3629 3.911964 CACAAAGTTTTAAATAGCGCGCT 59.088 39.130 38.01 38.01 0.00 5.92
2562 3630 5.083389 CACAAAGTTTTAAATAGCGCGCTA 58.917 37.500 39.72 39.72 0.00 4.26
2563 3631 5.566016 CACAAAGTTTTAAATAGCGCGCTAA 59.434 36.000 40.90 26.03 31.73 3.09
2564 3632 5.793457 ACAAAGTTTTAAATAGCGCGCTAAG 59.207 36.000 40.90 17.87 31.73 2.18
2565 3633 3.936661 AGTTTTAAATAGCGCGCTAAGC 58.063 40.909 40.90 27.92 43.95 3.09
2577 3645 1.856012 GCTAAGCATCTTAGCGGCG 59.144 57.895 18.95 0.51 38.12 6.46
2578 3646 1.856012 CTAAGCATCTTAGCGGCGC 59.144 57.895 26.86 26.86 40.15 6.53
2579 3647 0.875908 CTAAGCATCTTAGCGGCGCA 60.876 55.000 35.02 17.29 40.15 6.09
2580 3648 1.151777 TAAGCATCTTAGCGGCGCAC 61.152 55.000 35.02 13.31 40.15 5.34
2581 3649 3.941836 GCATCTTAGCGGCGCACC 61.942 66.667 35.02 4.46 0.00 5.01
2582 3650 2.202932 CATCTTAGCGGCGCACCT 60.203 61.111 35.02 16.53 0.00 4.00
2583 3651 2.107141 ATCTTAGCGGCGCACCTC 59.893 61.111 35.02 3.57 0.00 3.85
2584 3652 2.427245 ATCTTAGCGGCGCACCTCT 61.427 57.895 35.02 15.69 34.60 3.69
2585 3653 1.961180 ATCTTAGCGGCGCACCTCTT 61.961 55.000 35.02 14.87 31.87 2.85
2586 3654 2.125673 TTAGCGGCGCACCTCTTC 60.126 61.111 35.02 0.96 31.87 2.87
2587 3655 3.659089 TTAGCGGCGCACCTCTTCC 62.659 63.158 35.02 0.11 31.87 3.46
2590 3658 2.668212 CGGCGCACCTCTTCCAAA 60.668 61.111 10.83 0.00 0.00 3.28
2591 3659 2.040544 CGGCGCACCTCTTCCAAAT 61.041 57.895 10.83 0.00 0.00 2.32
2592 3660 1.508088 GGCGCACCTCTTCCAAATG 59.492 57.895 10.83 0.00 0.00 2.32
2593 3661 1.153958 GCGCACCTCTTCCAAATGC 60.154 57.895 0.30 0.00 0.00 3.56
2594 3662 1.589716 GCGCACCTCTTCCAAATGCT 61.590 55.000 0.30 0.00 34.06 3.79
2595 3663 1.737838 CGCACCTCTTCCAAATGCTA 58.262 50.000 0.00 0.00 34.06 3.49
2596 3664 2.292267 CGCACCTCTTCCAAATGCTAT 58.708 47.619 0.00 0.00 34.06 2.97
2597 3665 3.466836 CGCACCTCTTCCAAATGCTATA 58.533 45.455 0.00 0.00 34.06 1.31
2598 3666 3.496130 CGCACCTCTTCCAAATGCTATAG 59.504 47.826 0.00 0.00 34.06 1.31
2599 3667 3.251972 GCACCTCTTCCAAATGCTATAGC 59.748 47.826 18.18 18.18 42.50 2.97
2600 3668 3.496130 CACCTCTTCCAAATGCTATAGCG 59.504 47.826 19.55 5.29 45.83 4.26
2601 3669 3.134804 ACCTCTTCCAAATGCTATAGCGT 59.865 43.478 19.55 16.84 45.83 5.07
2602 3670 3.496130 CCTCTTCCAAATGCTATAGCGTG 59.504 47.826 20.02 16.14 45.83 5.34
2603 3671 2.872245 TCTTCCAAATGCTATAGCGTGC 59.128 45.455 20.02 0.00 45.83 5.34
2604 3672 2.620251 TCCAAATGCTATAGCGTGCT 57.380 45.000 20.02 7.98 45.83 4.40
2605 3673 3.744238 TCCAAATGCTATAGCGTGCTA 57.256 42.857 20.02 3.73 45.83 3.49
2606 3674 4.271696 TCCAAATGCTATAGCGTGCTAT 57.728 40.909 20.02 17.65 45.83 2.97
2607 3675 5.400066 TCCAAATGCTATAGCGTGCTATA 57.600 39.130 20.02 17.96 45.83 1.31
2613 3681 3.326733 CTATAGCGTGCTATAGCGGAG 57.673 52.381 27.04 13.65 46.26 4.63
2614 3682 0.171455 ATAGCGTGCTATAGCGGAGC 59.829 55.000 22.98 22.98 45.83 4.70
2636 3704 5.618561 GCTATAGCGCGCTATTTAAAATGT 58.381 37.500 46.76 28.88 39.65 2.71
2637 3705 6.077838 GCTATAGCGCGCTATTTAAAATGTT 58.922 36.000 46.76 28.22 39.65 2.71
2638 3706 6.577427 GCTATAGCGCGCTATTTAAAATGTTT 59.423 34.615 46.76 27.75 39.65 2.83
2639 3707 7.742963 GCTATAGCGCGCTATTTAAAATGTTTA 59.257 33.333 46.76 28.29 39.65 2.01
2640 3708 9.755064 CTATAGCGCGCTATTTAAAATGTTTAT 57.245 29.630 46.76 28.08 39.65 1.40
2642 3710 7.376530 AGCGCGCTATTTAAAATGTTTATTC 57.623 32.000 35.79 0.00 0.00 1.75
2643 3711 6.970043 AGCGCGCTATTTAAAATGTTTATTCA 59.030 30.769 35.79 0.00 0.00 2.57
2644 3712 7.647715 AGCGCGCTATTTAAAATGTTTATTCAT 59.352 29.630 35.79 0.00 0.00 2.57
2645 3713 8.265998 GCGCGCTATTTAAAATGTTTATTCATT 58.734 29.630 26.67 0.00 39.35 2.57
2660 3728 9.829507 TGTTTATTCATTTGTTTGGATCAAAGT 57.170 25.926 0.00 0.00 38.02 2.66
2663 3731 9.912634 TTATTCATTTGTTTGGATCAAAGTCTC 57.087 29.630 0.00 0.00 38.02 3.36
2664 3732 7.587037 TTCATTTGTTTGGATCAAAGTCTCT 57.413 32.000 0.00 0.00 38.02 3.10
2665 3733 7.587037 TCATTTGTTTGGATCAAAGTCTCTT 57.413 32.000 0.00 0.00 38.02 2.85
2666 3734 8.690203 TCATTTGTTTGGATCAAAGTCTCTTA 57.310 30.769 0.00 0.00 38.02 2.10
2667 3735 8.786898 TCATTTGTTTGGATCAAAGTCTCTTAG 58.213 33.333 0.00 0.00 38.02 2.18
2668 3736 6.560253 TTGTTTGGATCAAAGTCTCTTAGC 57.440 37.500 0.00 0.00 33.82 3.09
2669 3737 4.690748 TGTTTGGATCAAAGTCTCTTAGCG 59.309 41.667 0.00 0.00 33.82 4.26
2670 3738 2.893637 TGGATCAAAGTCTCTTAGCGC 58.106 47.619 0.00 0.00 0.00 5.92
2671 3739 2.233676 TGGATCAAAGTCTCTTAGCGCA 59.766 45.455 11.47 0.00 0.00 6.09
2672 3740 3.262420 GGATCAAAGTCTCTTAGCGCAA 58.738 45.455 11.47 0.50 0.00 4.85
2673 3741 3.308323 GGATCAAAGTCTCTTAGCGCAAG 59.692 47.826 11.47 11.67 35.38 4.01
2674 3742 3.660501 TCAAAGTCTCTTAGCGCAAGA 57.339 42.857 11.47 15.40 41.10 3.02
2675 3743 3.318017 TCAAAGTCTCTTAGCGCAAGAC 58.682 45.455 11.47 16.26 38.39 3.01
2676 3744 2.371910 AAGTCTCTTAGCGCAAGACC 57.628 50.000 21.13 13.52 40.21 3.85
2677 3745 1.551452 AGTCTCTTAGCGCAAGACCT 58.449 50.000 21.13 14.93 40.21 3.85
2678 3746 1.896465 AGTCTCTTAGCGCAAGACCTT 59.104 47.619 21.13 7.87 40.21 3.50
2679 3747 2.300437 AGTCTCTTAGCGCAAGACCTTT 59.700 45.455 21.13 7.34 40.21 3.11
2680 3748 3.067833 GTCTCTTAGCGCAAGACCTTTT 58.932 45.455 11.47 0.00 38.39 2.27
2681 3749 3.067106 TCTCTTAGCGCAAGACCTTTTG 58.933 45.455 11.47 4.34 38.39 2.44
2682 3750 3.067106 CTCTTAGCGCAAGACCTTTTGA 58.933 45.455 11.47 0.00 38.39 2.69
2683 3751 3.472652 TCTTAGCGCAAGACCTTTTGAA 58.527 40.909 11.47 0.00 38.39 2.69
2684 3752 3.880490 TCTTAGCGCAAGACCTTTTGAAA 59.120 39.130 11.47 0.00 38.39 2.69
2685 3753 4.336993 TCTTAGCGCAAGACCTTTTGAAAA 59.663 37.500 11.47 0.00 38.39 2.29
2686 3754 2.809446 AGCGCAAGACCTTTTGAAAAC 58.191 42.857 11.47 0.00 43.02 2.43
2687 3755 1.516864 GCGCAAGACCTTTTGAAAACG 59.483 47.619 0.30 0.00 43.02 3.60
2688 3756 1.516864 CGCAAGACCTTTTGAAAACGC 59.483 47.619 0.00 0.00 43.02 4.84
2689 3757 2.794631 CGCAAGACCTTTTGAAAACGCT 60.795 45.455 0.00 0.00 43.02 5.07
2690 3758 3.547214 CGCAAGACCTTTTGAAAACGCTA 60.547 43.478 0.00 0.00 43.02 4.26
2691 3759 4.546570 GCAAGACCTTTTGAAAACGCTAT 58.453 39.130 0.00 0.00 0.00 2.97
2692 3760 5.615984 CGCAAGACCTTTTGAAAACGCTATA 60.616 40.000 0.00 0.00 43.02 1.31
2693 3761 5.795441 GCAAGACCTTTTGAAAACGCTATAG 59.205 40.000 0.00 0.00 0.00 1.31
2694 3762 5.547181 AGACCTTTTGAAAACGCTATAGC 57.453 39.130 15.09 15.09 37.78 2.97
2709 3777 1.187087 ATAGCGTGCTATAGGGGAGC 58.813 55.000 12.50 0.00 37.47 4.70
2710 3778 0.112606 TAGCGTGCTATAGGGGAGCT 59.887 55.000 1.04 0.00 40.76 4.09
2711 3779 0.112606 AGCGTGCTATAGGGGAGCTA 59.887 55.000 1.04 0.00 40.76 3.32
2712 3780 1.187087 GCGTGCTATAGGGGAGCTAT 58.813 55.000 1.04 0.00 40.76 2.97
2713 3781 2.025226 AGCGTGCTATAGGGGAGCTATA 60.025 50.000 1.04 0.00 40.76 1.31
2714 3782 2.359531 GCGTGCTATAGGGGAGCTATAG 59.640 54.545 1.04 0.00 40.76 1.31
2715 3783 3.622630 CGTGCTATAGGGGAGCTATAGT 58.377 50.000 1.04 0.00 40.76 2.12
2716 3784 3.378742 CGTGCTATAGGGGAGCTATAGTG 59.621 52.174 1.04 0.00 40.76 2.74
2717 3785 3.702045 GTGCTATAGGGGAGCTATAGTGG 59.298 52.174 1.04 0.00 40.76 4.00
2718 3786 3.301274 GCTATAGGGGAGCTATAGTGGG 58.699 54.545 1.04 0.00 38.78 4.61
2719 3787 2.255770 ATAGGGGAGCTATAGTGGGC 57.744 55.000 0.84 0.00 0.00 5.36
2720 3788 1.167943 TAGGGGAGCTATAGTGGGCT 58.832 55.000 0.84 0.00 41.88 5.19
2721 3789 1.167943 AGGGGAGCTATAGTGGGCTA 58.832 55.000 0.84 0.00 39.05 3.93
2722 3790 1.725182 AGGGGAGCTATAGTGGGCTAT 59.275 52.381 0.84 0.00 39.05 2.97
2723 3791 2.114506 AGGGGAGCTATAGTGGGCTATT 59.885 50.000 0.84 0.00 39.05 1.73
2724 3792 2.913617 GGGGAGCTATAGTGGGCTATTT 59.086 50.000 0.84 0.00 39.05 1.40
2725 3793 4.101856 GGGGAGCTATAGTGGGCTATTTA 58.898 47.826 0.84 0.00 39.05 1.40
2726 3794 4.534897 GGGGAGCTATAGTGGGCTATTTAA 59.465 45.833 0.84 0.00 39.05 1.52
2727 3795 5.013808 GGGGAGCTATAGTGGGCTATTTAAA 59.986 44.000 0.84 0.00 39.05 1.52
2728 3796 6.466759 GGGGAGCTATAGTGGGCTATTTAAAA 60.467 42.308 0.84 0.00 39.05 1.52
2729 3797 6.430308 GGGAGCTATAGTGGGCTATTTAAAAC 59.570 42.308 0.84 0.00 39.05 2.43
2730 3798 6.996282 GGAGCTATAGTGGGCTATTTAAAACA 59.004 38.462 0.84 0.00 39.05 2.83
2731 3799 7.173390 GGAGCTATAGTGGGCTATTTAAAACAG 59.827 40.741 0.84 0.00 39.05 3.16
2732 3800 7.574607 AGCTATAGTGGGCTATTTAAAACAGT 58.425 34.615 0.84 0.00 38.71 3.55
2733 3801 7.499232 AGCTATAGTGGGCTATTTAAAACAGTG 59.501 37.037 0.84 0.00 38.71 3.66
2734 3802 4.783764 AGTGGGCTATTTAAAACAGTGC 57.216 40.909 0.00 0.00 0.00 4.40
2735 3803 4.407365 AGTGGGCTATTTAAAACAGTGCT 58.593 39.130 0.00 0.00 0.00 4.40
2736 3804 4.218417 AGTGGGCTATTTAAAACAGTGCTG 59.782 41.667 0.00 0.00 0.00 4.41
2737 3805 4.217550 GTGGGCTATTTAAAACAGTGCTGA 59.782 41.667 6.17 0.00 0.00 4.26
2738 3806 4.217550 TGGGCTATTTAAAACAGTGCTGAC 59.782 41.667 6.17 0.00 0.00 3.51
2739 3807 4.217550 GGGCTATTTAAAACAGTGCTGACA 59.782 41.667 6.17 0.00 0.00 3.58
2751 3819 3.333414 CTGACACAGCACAACCGG 58.667 61.111 0.00 0.00 0.00 5.28
2752 3820 2.896801 CTGACACAGCACAACCGGC 61.897 63.158 0.00 0.00 0.00 6.13
2753 3821 3.660111 GACACAGCACAACCGGCC 61.660 66.667 0.00 0.00 0.00 6.13
2754 3822 4.189580 ACACAGCACAACCGGCCT 62.190 61.111 0.00 0.00 0.00 5.19
2755 3823 3.663176 CACAGCACAACCGGCCTG 61.663 66.667 0.00 0.90 0.00 4.85
2758 3826 4.892965 AGCACAACCGGCCTGCAA 62.893 61.111 15.53 0.00 33.06 4.08
2759 3827 3.683937 GCACAACCGGCCTGCAAT 61.684 61.111 0.00 0.00 0.00 3.56
2760 3828 3.050339 CACAACCGGCCTGCAATT 58.950 55.556 0.00 0.00 0.00 2.32
2761 3829 1.367102 CACAACCGGCCTGCAATTT 59.633 52.632 0.00 0.00 0.00 1.82
2762 3830 0.600557 CACAACCGGCCTGCAATTTA 59.399 50.000 0.00 0.00 0.00 1.40
2763 3831 1.204467 CACAACCGGCCTGCAATTTAT 59.796 47.619 0.00 0.00 0.00 1.40
2764 3832 2.425312 CACAACCGGCCTGCAATTTATA 59.575 45.455 0.00 0.00 0.00 0.98
2765 3833 3.093057 ACAACCGGCCTGCAATTTATAA 58.907 40.909 0.00 0.00 0.00 0.98
2766 3834 3.119280 ACAACCGGCCTGCAATTTATAAC 60.119 43.478 0.00 0.00 0.00 1.89
2767 3835 2.028876 ACCGGCCTGCAATTTATAACC 58.971 47.619 0.00 0.00 0.00 2.85
2768 3836 2.028130 CCGGCCTGCAATTTATAACCA 58.972 47.619 0.00 0.00 0.00 3.67
2769 3837 2.223711 CCGGCCTGCAATTTATAACCAC 60.224 50.000 0.00 0.00 0.00 4.16
2770 3838 2.540769 CGGCCTGCAATTTATAACCACG 60.541 50.000 0.00 0.00 0.00 4.94
2771 3839 2.685897 GGCCTGCAATTTATAACCACGA 59.314 45.455 0.00 0.00 0.00 4.35
2772 3840 3.129638 GGCCTGCAATTTATAACCACGAA 59.870 43.478 0.00 0.00 0.00 3.85
2773 3841 4.202111 GGCCTGCAATTTATAACCACGAAT 60.202 41.667 0.00 0.00 0.00 3.34
2774 3842 5.348164 GCCTGCAATTTATAACCACGAATT 58.652 37.500 0.00 0.00 0.00 2.17
2775 3843 5.458779 GCCTGCAATTTATAACCACGAATTC 59.541 40.000 0.00 0.00 0.00 2.17
2776 3844 6.680378 GCCTGCAATTTATAACCACGAATTCT 60.680 38.462 3.52 0.00 0.00 2.40
2777 3845 7.468084 GCCTGCAATTTATAACCACGAATTCTA 60.468 37.037 3.52 0.00 0.00 2.10
2778 3846 8.567948 CCTGCAATTTATAACCACGAATTCTAT 58.432 33.333 3.52 0.00 0.00 1.98
2779 3847 9.599322 CTGCAATTTATAACCACGAATTCTATC 57.401 33.333 3.52 0.00 0.00 2.08
2780 3848 8.564574 TGCAATTTATAACCACGAATTCTATCC 58.435 33.333 3.52 0.00 0.00 2.59
2781 3849 8.564574 GCAATTTATAACCACGAATTCTATCCA 58.435 33.333 3.52 0.00 0.00 3.41
2782 3850 9.878599 CAATTTATAACCACGAATTCTATCCAC 57.121 33.333 3.52 0.00 0.00 4.02
2783 3851 9.847224 AATTTATAACCACGAATTCTATCCACT 57.153 29.630 3.52 0.00 0.00 4.00
2785 3853 9.976511 TTTATAACCACGAATTCTATCCACTAG 57.023 33.333 3.52 0.00 0.00 2.57
2786 3854 5.934402 AACCACGAATTCTATCCACTAGT 57.066 39.130 3.52 0.00 0.00 2.57
2787 3855 8.701908 ATAACCACGAATTCTATCCACTAGTA 57.298 34.615 3.52 0.00 0.00 1.82
2788 3856 6.636562 ACCACGAATTCTATCCACTAGTAG 57.363 41.667 3.52 0.00 0.00 2.57
2789 3857 6.363065 ACCACGAATTCTATCCACTAGTAGA 58.637 40.000 3.59 0.00 0.00 2.59
2790 3858 6.832384 ACCACGAATTCTATCCACTAGTAGAA 59.168 38.462 3.59 8.00 40.19 2.10
2791 3859 7.341256 ACCACGAATTCTATCCACTAGTAGAAA 59.659 37.037 9.33 0.00 39.56 2.52
2792 3860 8.195436 CCACGAATTCTATCCACTAGTAGAAAA 58.805 37.037 9.33 0.00 39.56 2.29
2793 3861 9.021863 CACGAATTCTATCCACTAGTAGAAAAC 57.978 37.037 9.33 6.45 39.56 2.43
2794 3862 8.746530 ACGAATTCTATCCACTAGTAGAAAACA 58.253 33.333 9.33 0.00 39.56 2.83
2795 3863 9.582431 CGAATTCTATCCACTAGTAGAAAACAA 57.418 33.333 9.33 0.00 39.56 2.83
2797 3865 9.892130 AATTCTATCCACTAGTAGAAAACAAGG 57.108 33.333 9.33 0.00 39.56 3.61
2798 3866 6.875076 TCTATCCACTAGTAGAAAACAAGGC 58.125 40.000 3.59 0.00 0.00 4.35
2799 3867 5.763876 ATCCACTAGTAGAAAACAAGGCT 57.236 39.130 3.59 0.00 0.00 4.58
2800 3868 5.562298 TCCACTAGTAGAAAACAAGGCTT 57.438 39.130 3.59 0.00 0.00 4.35
2801 3869 5.937111 TCCACTAGTAGAAAACAAGGCTTT 58.063 37.500 3.59 0.00 0.00 3.51
2802 3870 5.763204 TCCACTAGTAGAAAACAAGGCTTTG 59.237 40.000 7.07 7.07 40.24 2.77
2803 3871 5.048713 CCACTAGTAGAAAACAAGGCTTTGG 60.049 44.000 13.65 0.00 38.66 3.28
2804 3872 5.531287 CACTAGTAGAAAACAAGGCTTTGGT 59.469 40.000 13.65 2.75 38.66 3.67
2805 3873 5.763698 ACTAGTAGAAAACAAGGCTTTGGTC 59.236 40.000 13.65 7.21 38.66 4.02
2806 3874 3.889538 AGTAGAAAACAAGGCTTTGGTCC 59.110 43.478 13.65 2.36 38.66 4.46
2807 3875 2.745968 AGAAAACAAGGCTTTGGTCCA 58.254 42.857 13.65 0.00 38.66 4.02
2808 3876 3.103742 AGAAAACAAGGCTTTGGTCCAA 58.896 40.909 13.65 0.00 38.66 3.53
2809 3877 3.517500 AGAAAACAAGGCTTTGGTCCAAA 59.482 39.130 16.26 16.26 38.66 3.28
2810 3878 2.979814 AACAAGGCTTTGGTCCAAAC 57.020 45.000 13.26 10.04 38.66 2.93
2811 3879 1.119684 ACAAGGCTTTGGTCCAAACC 58.880 50.000 13.26 17.52 46.66 3.27
2824 3892 5.801531 GGTCCAAACCAGAAAAAGGTATT 57.198 39.130 0.00 0.00 45.68 1.89
2825 3893 6.904463 GGTCCAAACCAGAAAAAGGTATTA 57.096 37.500 0.00 0.00 45.68 0.98
2826 3894 7.292713 GGTCCAAACCAGAAAAAGGTATTAA 57.707 36.000 0.00 0.00 45.68 1.40
2827 3895 7.903145 GGTCCAAACCAGAAAAAGGTATTAAT 58.097 34.615 0.00 0.00 45.68 1.40
2828 3896 8.033038 GGTCCAAACCAGAAAAAGGTATTAATC 58.967 37.037 0.00 0.00 45.68 1.75
2829 3897 8.033038 GTCCAAACCAGAAAAAGGTATTAATCC 58.967 37.037 0.00 0.00 38.76 3.01
2830 3898 7.179516 TCCAAACCAGAAAAAGGTATTAATCCC 59.820 37.037 0.00 0.00 38.76 3.85
2831 3899 6.769134 AACCAGAAAAAGGTATTAATCCCG 57.231 37.500 0.00 0.00 38.76 5.14
2832 3900 5.198207 ACCAGAAAAAGGTATTAATCCCGG 58.802 41.667 0.00 0.00 37.67 5.73
2833 3901 5.198207 CCAGAAAAAGGTATTAATCCCGGT 58.802 41.667 0.00 0.00 0.00 5.28
2834 3902 5.655090 CCAGAAAAAGGTATTAATCCCGGTT 59.345 40.000 0.00 0.00 0.00 4.44
2835 3903 6.183360 CCAGAAAAAGGTATTAATCCCGGTTC 60.183 42.308 0.00 0.00 0.00 3.62
2836 3904 6.602009 CAGAAAAAGGTATTAATCCCGGTTCT 59.398 38.462 0.00 0.00 0.00 3.01
2837 3905 6.827251 AGAAAAAGGTATTAATCCCGGTTCTC 59.173 38.462 0.00 0.00 0.00 2.87
2838 3906 4.701651 AAGGTATTAATCCCGGTTCTCC 57.298 45.455 0.00 0.00 0.00 3.71
2839 3907 3.937751 AGGTATTAATCCCGGTTCTCCT 58.062 45.455 0.00 0.00 0.00 3.69
2840 3908 5.083953 AGGTATTAATCCCGGTTCTCCTA 57.916 43.478 0.00 0.00 0.00 2.94
2841 3909 4.837298 AGGTATTAATCCCGGTTCTCCTAC 59.163 45.833 0.00 0.00 0.00 3.18
2842 3910 4.321527 GGTATTAATCCCGGTTCTCCTACG 60.322 50.000 0.00 0.00 0.00 3.51
2843 3911 2.734755 TAATCCCGGTTCTCCTACGA 57.265 50.000 0.00 0.00 0.00 3.43
2844 3912 1.856629 AATCCCGGTTCTCCTACGAA 58.143 50.000 0.00 0.00 0.00 3.85
2845 3913 1.109609 ATCCCGGTTCTCCTACGAAC 58.890 55.000 0.00 0.00 41.91 3.95
2851 3919 2.541055 GTTCTCCTACGAACCGAGAC 57.459 55.000 0.00 0.00 37.82 3.36
2852 3920 1.132073 GTTCTCCTACGAACCGAGACC 59.868 57.143 0.00 0.00 37.82 3.85
2853 3921 0.325933 TCTCCTACGAACCGAGACCA 59.674 55.000 0.00 0.00 0.00 4.02
2854 3922 1.064906 TCTCCTACGAACCGAGACCAT 60.065 52.381 0.00 0.00 0.00 3.55
2855 3923 1.065701 CTCCTACGAACCGAGACCATG 59.934 57.143 0.00 0.00 0.00 3.66
2856 3924 0.815734 CCTACGAACCGAGACCATGT 59.184 55.000 0.00 0.00 0.00 3.21
2857 3925 1.469251 CCTACGAACCGAGACCATGTG 60.469 57.143 0.00 0.00 0.00 3.21
2858 3926 0.108992 TACGAACCGAGACCATGTGC 60.109 55.000 0.00 0.00 0.00 4.57
2859 3927 1.374125 CGAACCGAGACCATGTGCA 60.374 57.895 0.00 0.00 0.00 4.57
2860 3928 0.740868 CGAACCGAGACCATGTGCAT 60.741 55.000 0.00 0.00 0.00 3.96
2861 3929 1.009829 GAACCGAGACCATGTGCATC 58.990 55.000 0.00 0.00 0.00 3.91
2862 3930 0.324614 AACCGAGACCATGTGCATCA 59.675 50.000 0.00 0.00 0.00 3.07
2863 3931 0.107993 ACCGAGACCATGTGCATCAG 60.108 55.000 0.00 0.00 0.00 2.90
2864 3932 0.107993 CCGAGACCATGTGCATCAGT 60.108 55.000 0.00 0.00 0.00 3.41
2865 3933 1.284657 CGAGACCATGTGCATCAGTC 58.715 55.000 0.00 0.00 0.00 3.51
2866 3934 1.661341 GAGACCATGTGCATCAGTCC 58.339 55.000 0.00 0.00 0.00 3.85
2867 3935 0.254178 AGACCATGTGCATCAGTCCC 59.746 55.000 0.00 0.00 0.00 4.46
2868 3936 1.078214 ACCATGTGCATCAGTCCCG 60.078 57.895 0.00 0.00 0.00 5.14
2869 3937 1.221566 CCATGTGCATCAGTCCCGA 59.778 57.895 0.00 0.00 0.00 5.14
2870 3938 0.179037 CCATGTGCATCAGTCCCGAT 60.179 55.000 0.00 0.00 0.00 4.18
2871 3939 1.671979 CATGTGCATCAGTCCCGATT 58.328 50.000 0.00 0.00 0.00 3.34
2872 3940 1.600957 CATGTGCATCAGTCCCGATTC 59.399 52.381 0.00 0.00 0.00 2.52
2873 3941 0.612744 TGTGCATCAGTCCCGATTCA 59.387 50.000 0.00 0.00 0.00 2.57
2874 3942 1.210234 TGTGCATCAGTCCCGATTCAT 59.790 47.619 0.00 0.00 0.00 2.57
2875 3943 1.600957 GTGCATCAGTCCCGATTCATG 59.399 52.381 0.00 0.00 0.00 3.07
2876 3944 1.485895 TGCATCAGTCCCGATTCATGA 59.514 47.619 0.00 0.00 0.00 3.07
2877 3945 2.141517 GCATCAGTCCCGATTCATGAG 58.858 52.381 0.00 0.00 0.00 2.90
2878 3946 2.763933 CATCAGTCCCGATTCATGAGG 58.236 52.381 0.00 0.00 0.00 3.86
2879 3947 0.465705 TCAGTCCCGATTCATGAGGC 59.534 55.000 0.00 0.00 0.00 4.70
2880 3948 0.533755 CAGTCCCGATTCATGAGGCC 60.534 60.000 0.00 0.00 0.00 5.19
2881 3949 0.982852 AGTCCCGATTCATGAGGCCA 60.983 55.000 5.01 0.00 0.00 5.36
2882 3950 0.533755 GTCCCGATTCATGAGGCCAG 60.534 60.000 5.01 0.00 0.00 4.85
2883 3951 1.228063 CCCGATTCATGAGGCCAGG 60.228 63.158 5.01 0.00 0.00 4.45
2884 3952 1.699054 CCCGATTCATGAGGCCAGGA 61.699 60.000 5.01 0.00 0.00 3.86
2885 3953 0.533755 CCGATTCATGAGGCCAGGAC 60.534 60.000 5.01 0.00 32.27 3.85
2886 3954 0.877649 CGATTCATGAGGCCAGGACG 60.878 60.000 5.01 0.00 32.27 4.79
2887 3955 1.153086 ATTCATGAGGCCAGGACGC 60.153 57.895 5.01 0.00 32.27 5.19
2888 3956 1.630126 ATTCATGAGGCCAGGACGCT 61.630 55.000 5.01 0.00 32.27 5.07
2889 3957 0.975556 TTCATGAGGCCAGGACGCTA 60.976 55.000 5.01 0.00 32.27 4.26
2890 3958 1.068753 CATGAGGCCAGGACGCTAG 59.931 63.158 5.01 0.00 0.00 3.42
2891 3959 2.801631 ATGAGGCCAGGACGCTAGC 61.802 63.158 5.01 4.06 0.00 3.42
2892 3960 4.228567 GAGGCCAGGACGCTAGCC 62.229 72.222 9.66 0.00 46.13 3.93
2912 3980 2.044946 GCCTCGGGAGCCATTTGT 60.045 61.111 0.00 0.00 0.00 2.83
2913 3981 2.115291 GCCTCGGGAGCCATTTGTC 61.115 63.158 0.00 0.00 0.00 3.18
2914 3982 1.452108 CCTCGGGAGCCATTTGTCC 60.452 63.158 0.00 0.00 0.00 4.02
2917 3985 2.440247 GGGAGCCATTTGTCCCGG 60.440 66.667 0.00 0.00 43.27 5.73
2918 3986 2.355115 GGAGCCATTTGTCCCGGT 59.645 61.111 0.00 0.00 0.00 5.28
2919 3987 1.304134 GGAGCCATTTGTCCCGGTT 60.304 57.895 0.00 0.00 0.00 4.44
2920 3988 0.898326 GGAGCCATTTGTCCCGGTTT 60.898 55.000 0.00 0.00 0.00 3.27
2921 3989 0.243636 GAGCCATTTGTCCCGGTTTG 59.756 55.000 0.00 0.00 0.00 2.93
2922 3990 0.469144 AGCCATTTGTCCCGGTTTGT 60.469 50.000 0.00 0.00 0.00 2.83
2923 3991 0.038618 GCCATTTGTCCCGGTTTGTC 60.039 55.000 0.00 0.00 0.00 3.18
2924 3992 1.616159 CCATTTGTCCCGGTTTGTCT 58.384 50.000 0.00 0.00 0.00 3.41
2925 3993 1.269448 CCATTTGTCCCGGTTTGTCTG 59.731 52.381 0.00 0.00 0.00 3.51
2926 3994 2.226330 CATTTGTCCCGGTTTGTCTGA 58.774 47.619 0.00 0.00 0.00 3.27
2927 3995 2.649531 TTTGTCCCGGTTTGTCTGAT 57.350 45.000 0.00 0.00 0.00 2.90
2928 3996 2.178912 TTGTCCCGGTTTGTCTGATC 57.821 50.000 0.00 0.00 0.00 2.92
2929 3997 0.323629 TGTCCCGGTTTGTCTGATCC 59.676 55.000 0.00 0.00 0.00 3.36
2930 3998 0.392595 GTCCCGGTTTGTCTGATCCC 60.393 60.000 0.00 0.00 0.00 3.85
2931 3999 0.546747 TCCCGGTTTGTCTGATCCCT 60.547 55.000 0.00 0.00 0.00 4.20
2932 4000 0.328258 CCCGGTTTGTCTGATCCCTT 59.672 55.000 0.00 0.00 0.00 3.95
2933 4001 1.453155 CCGGTTTGTCTGATCCCTTG 58.547 55.000 0.00 0.00 0.00 3.61
2934 4002 1.453155 CGGTTTGTCTGATCCCTTGG 58.547 55.000 0.00 0.00 0.00 3.61
2935 4003 1.271379 CGGTTTGTCTGATCCCTTGGT 60.271 52.381 0.00 0.00 0.00 3.67
2936 4004 2.437413 GGTTTGTCTGATCCCTTGGTC 58.563 52.381 0.00 0.00 0.00 4.02
2937 4005 2.437413 GTTTGTCTGATCCCTTGGTCC 58.563 52.381 0.00 0.00 0.00 4.46
2938 4006 0.991920 TTGTCTGATCCCTTGGTCCC 59.008 55.000 0.00 0.00 0.00 4.46
2939 4007 1.264749 TGTCTGATCCCTTGGTCCCG 61.265 60.000 0.00 0.00 0.00 5.14
2940 4008 1.689233 TCTGATCCCTTGGTCCCGG 60.689 63.158 0.00 0.00 0.00 5.73
2941 4009 1.995626 CTGATCCCTTGGTCCCGGT 60.996 63.158 0.00 0.00 0.00 5.28
2942 4010 1.540367 TGATCCCTTGGTCCCGGTT 60.540 57.895 0.00 0.00 0.00 4.44
2943 4011 1.223763 GATCCCTTGGTCCCGGTTC 59.776 63.158 0.00 0.00 0.00 3.62
2944 4012 2.266816 GATCCCTTGGTCCCGGTTCC 62.267 65.000 0.00 2.55 0.00 3.62
2945 4013 3.253838 CCCTTGGTCCCGGTTCCA 61.254 66.667 10.26 10.26 0.00 3.53
2946 4014 2.351276 CCTTGGTCCCGGTTCCAG 59.649 66.667 13.29 8.85 35.05 3.86
2947 4015 2.221299 CCTTGGTCCCGGTTCCAGA 61.221 63.158 13.29 6.10 35.05 3.86
2948 4016 1.003718 CTTGGTCCCGGTTCCAGAC 60.004 63.158 13.29 7.03 35.05 3.51
2949 4017 1.764571 CTTGGTCCCGGTTCCAGACA 61.765 60.000 13.29 1.16 35.05 3.41
2950 4018 2.047213 TTGGTCCCGGTTCCAGACAC 62.047 60.000 13.29 3.17 35.05 3.67
2951 4019 2.048503 GTCCCGGTTCCAGACACG 60.049 66.667 0.00 0.00 0.00 4.49
2952 4020 2.203523 TCCCGGTTCCAGACACGA 60.204 61.111 0.00 0.00 0.00 4.35
2953 4021 1.833492 TCCCGGTTCCAGACACGAA 60.833 57.895 0.00 0.00 0.00 3.85
2954 4022 1.666872 CCCGGTTCCAGACACGAAC 60.667 63.158 0.00 0.00 39.12 3.95
2958 4026 2.810486 GTTCCAGACACGAACCGAG 58.190 57.895 0.00 0.00 34.75 4.63
2959 4027 0.313043 GTTCCAGACACGAACCGAGA 59.687 55.000 0.00 0.00 34.75 4.04
2960 4028 0.313043 TTCCAGACACGAACCGAGAC 59.687 55.000 0.00 0.00 0.00 3.36
2961 4029 1.080705 CCAGACACGAACCGAGACC 60.081 63.158 0.00 0.00 0.00 3.85
2962 4030 1.658114 CAGACACGAACCGAGACCA 59.342 57.895 0.00 0.00 0.00 4.02
2963 4031 0.031585 CAGACACGAACCGAGACCAA 59.968 55.000 0.00 0.00 0.00 3.67
2964 4032 0.966920 AGACACGAACCGAGACCAAT 59.033 50.000 0.00 0.00 0.00 3.16
2965 4033 1.068474 GACACGAACCGAGACCAATG 58.932 55.000 0.00 0.00 0.00 2.82
2966 4034 0.320421 ACACGAACCGAGACCAATGG 60.320 55.000 0.00 0.00 0.00 3.16
2967 4035 1.019278 CACGAACCGAGACCAATGGG 61.019 60.000 3.55 0.00 41.29 4.00
2968 4036 2.106683 CGAACCGAGACCAATGGGC 61.107 63.158 3.55 0.00 37.90 5.36
2969 4037 1.749258 GAACCGAGACCAATGGGCC 60.749 63.158 0.00 0.00 37.90 5.80
2970 4038 2.198304 GAACCGAGACCAATGGGCCT 62.198 60.000 0.00 0.00 37.90 5.19
2971 4039 1.789576 AACCGAGACCAATGGGCCTT 61.790 55.000 0.00 0.00 37.90 4.35
2972 4040 1.750399 CCGAGACCAATGGGCCTTG 60.750 63.158 0.00 6.91 37.90 3.61
2973 4041 2.409870 CGAGACCAATGGGCCTTGC 61.410 63.158 0.00 0.00 37.90 4.01
2974 4042 1.000396 GAGACCAATGGGCCTTGCT 60.000 57.895 0.00 0.71 37.90 3.91
2975 4043 1.000396 AGACCAATGGGCCTTGCTC 60.000 57.895 0.00 4.19 37.90 4.26
2976 4044 2.037847 ACCAATGGGCCTTGCTCC 59.962 61.111 4.53 0.00 37.90 4.70
2977 4045 2.361771 CCAATGGGCCTTGCTCCT 59.638 61.111 4.53 0.00 0.00 3.69
2978 4046 2.056223 CCAATGGGCCTTGCTCCTG 61.056 63.158 4.53 0.00 0.00 3.86
2979 4047 2.056223 CAATGGGCCTTGCTCCTGG 61.056 63.158 4.53 0.00 0.00 4.45
2985 4053 3.741476 CCTTGCTCCTGGCGCAAC 61.741 66.667 19.41 0.00 41.97 4.17
2986 4054 2.979676 CTTGCTCCTGGCGCAACA 60.980 61.111 19.41 1.37 41.97 3.33
2987 4055 3.259425 CTTGCTCCTGGCGCAACAC 62.259 63.158 19.41 0.00 41.97 3.32
2990 4058 2.281761 CTCCTGGCGCAACACCTT 60.282 61.111 10.83 0.00 0.00 3.50
2991 4059 1.898574 CTCCTGGCGCAACACCTTT 60.899 57.895 10.83 0.00 0.00 3.11
2992 4060 0.605319 CTCCTGGCGCAACACCTTTA 60.605 55.000 10.83 0.00 0.00 1.85
2993 4061 0.605319 TCCTGGCGCAACACCTTTAG 60.605 55.000 10.83 0.00 0.00 1.85
2994 4062 0.889186 CCTGGCGCAACACCTTTAGT 60.889 55.000 10.83 0.00 0.00 2.24
2995 4063 0.517316 CTGGCGCAACACCTTTAGTC 59.483 55.000 10.83 0.00 0.00 2.59
2996 4064 0.887387 TGGCGCAACACCTTTAGTCC 60.887 55.000 10.83 0.00 0.00 3.85
2997 4065 1.583495 GGCGCAACACCTTTAGTCCC 61.583 60.000 10.83 0.00 0.00 4.46
2998 4066 1.908066 GCGCAACACCTTTAGTCCCG 61.908 60.000 0.30 0.00 0.00 5.14
2999 4067 1.296056 CGCAACACCTTTAGTCCCGG 61.296 60.000 0.00 0.00 0.00 5.73
3000 4068 0.250597 GCAACACCTTTAGTCCCGGT 60.251 55.000 0.00 0.00 0.00 5.28
3001 4069 1.816572 GCAACACCTTTAGTCCCGGTT 60.817 52.381 0.00 0.00 0.00 4.44
3002 4070 1.877443 CAACACCTTTAGTCCCGGTTG 59.123 52.381 0.00 0.00 0.00 3.77
3003 4071 0.399075 ACACCTTTAGTCCCGGTTGG 59.601 55.000 0.00 0.00 0.00 3.77
3004 4072 0.399075 CACCTTTAGTCCCGGTTGGT 59.601 55.000 0.00 0.00 34.77 3.67
3005 4073 0.399075 ACCTTTAGTCCCGGTTGGTG 59.601 55.000 0.00 0.00 34.77 4.17
3006 4074 0.322187 CCTTTAGTCCCGGTTGGTGG 60.322 60.000 0.00 0.00 34.77 4.61
3007 4075 0.958876 CTTTAGTCCCGGTTGGTGGC 60.959 60.000 0.00 0.00 34.77 5.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 2.290323 GGTGTGTTCCTGGAGCTGTATT 60.290 50.000 11.95 0.00 0.00 1.89
38 39 2.556559 GGTTCCCAAGCCCAAACTATGA 60.557 50.000 0.00 0.00 0.00 2.15
314 315 1.133009 ACAGGGTTCTCCAGACAGTCT 60.133 52.381 0.00 0.00 38.24 3.24
355 356 3.962063 TCTTGTGTAGTTGGTGTCCACTA 59.038 43.478 0.00 0.00 30.78 2.74
462 463 3.297134 TTCCTGTGTTTCCAAAGCTCT 57.703 42.857 0.00 0.00 0.00 4.09
833 849 5.185828 ACGGAATGATGGAGATGATATCGAA 59.814 40.000 0.00 0.00 0.00 3.71
839 855 3.246301 AGGACGGAATGATGGAGATGAT 58.754 45.455 0.00 0.00 0.00 2.45
866 896 4.318903 CGCTACGTAGTGACTTCTAGATGG 60.319 50.000 28.10 0.00 45.73 3.51
867 897 4.507021 TCGCTACGTAGTGACTTCTAGATG 59.493 45.833 29.96 4.14 45.73 2.90
868 898 4.691175 TCGCTACGTAGTGACTTCTAGAT 58.309 43.478 29.96 0.00 45.73 1.98
869 899 4.111198 CTCGCTACGTAGTGACTTCTAGA 58.889 47.826 29.96 11.34 45.73 2.43
870 900 3.302610 GCTCGCTACGTAGTGACTTCTAG 60.303 52.174 29.96 21.05 45.73 2.43
871 901 2.606725 GCTCGCTACGTAGTGACTTCTA 59.393 50.000 29.96 12.65 45.73 2.10
877 922 2.014335 TAGTGCTCGCTACGTAGTGA 57.986 50.000 30.99 30.99 45.73 3.41
891 936 2.762535 TAGGACAGCAGGTTTAGTGC 57.237 50.000 0.00 0.00 41.54 4.40
893 938 6.761714 CGAATTTATAGGACAGCAGGTTTAGT 59.238 38.462 0.00 0.00 0.00 2.24
894 939 6.292919 GCGAATTTATAGGACAGCAGGTTTAG 60.293 42.308 0.00 0.00 0.00 1.85
895 940 5.526111 GCGAATTTATAGGACAGCAGGTTTA 59.474 40.000 0.00 0.00 0.00 2.01
896 941 4.335594 GCGAATTTATAGGACAGCAGGTTT 59.664 41.667 0.00 0.00 0.00 3.27
897 942 3.877508 GCGAATTTATAGGACAGCAGGTT 59.122 43.478 0.00 0.00 0.00 3.50
899 944 3.466836 TGCGAATTTATAGGACAGCAGG 58.533 45.455 0.00 0.00 0.00 4.85
906 952 3.496160 GGGGAGCTTGCGAATTTATAGGA 60.496 47.826 0.00 0.00 0.00 2.94
949 1011 1.107538 TGATCGAAGGCCCTACTCGG 61.108 60.000 0.00 0.00 0.00 4.63
950 1012 0.312416 CTGATCGAAGGCCCTACTCG 59.688 60.000 0.00 3.13 0.00 4.18
983 1051 1.372582 CATGGCTCGCTTGCTTTCTA 58.627 50.000 0.00 0.00 0.00 2.10
986 1054 2.998279 GCCATGGCTCGCTTGCTTT 61.998 57.895 29.98 0.00 38.26 3.51
1176 1365 4.243008 TCGTTGGTGCTGCCCGAA 62.243 61.111 0.00 0.00 36.04 4.30
1179 1368 3.050275 GAGTCGTTGGTGCTGCCC 61.050 66.667 0.00 0.00 36.04 5.36
1206 1422 4.966787 GCCCTGGCGTCCAACCAA 62.967 66.667 0.00 0.00 36.56 3.67
1257 1473 2.699768 CGCGCCACCATTGTCCAAT 61.700 57.895 0.00 0.00 0.00 3.16
1306 1522 1.733041 ACGACGTCATGGCGTTGAG 60.733 57.895 39.11 27.89 46.10 3.02
1380 1596 0.099436 CTAAACTGCAATGCCGGCTC 59.901 55.000 29.70 14.33 0.00 4.70
1404 1631 2.163509 AGCACGTACTGTCTCTGTCAT 58.836 47.619 0.00 0.00 0.00 3.06
1430 1658 3.518634 TTTGGAGCTGGACAAACAAAC 57.481 42.857 0.00 0.00 32.14 2.93
1451 1683 5.925506 ACAATCCAAGATCAATGCATCAA 57.074 34.783 0.00 0.00 0.00 2.57
1488 1953 1.675641 GTGAGCCTTTCCCACGCAT 60.676 57.895 0.00 0.00 0.00 4.73
1650 2125 5.009854 TCTTGAACTGCATGTCGATGATA 57.990 39.130 0.00 0.00 0.00 2.15
1683 2158 2.682494 GACAGCCCCGGGTACTCA 60.682 66.667 21.85 0.00 0.00 3.41
1791 2274 2.102357 CCGTCGTCCATGAGGTCG 59.898 66.667 0.00 0.00 45.88 4.79
1977 2472 1.306642 ACTGGACGTCGGAGCTGTAG 61.307 60.000 9.92 0.56 0.00 2.74
2045 3062 1.252904 AAATCCAGGCTTGCATGCGT 61.253 50.000 17.36 15.40 0.00 5.24
2046 3063 0.740149 TAAATCCAGGCTTGCATGCG 59.260 50.000 17.36 0.00 0.00 4.73
2108 3125 2.342648 GAGGACACACACCGGACC 59.657 66.667 9.46 0.00 0.00 4.46
2145 3172 0.958091 CCCAGTGGCGAGAGAGATAG 59.042 60.000 2.61 0.00 0.00 2.08
2147 3174 0.105760 ATCCCAGTGGCGAGAGAGAT 60.106 55.000 2.61 0.00 0.00 2.75
2158 3185 2.771321 CCCCATCCCCATCCCAGTG 61.771 68.421 0.00 0.00 0.00 3.66
2159 3186 2.304306 ATCCCCATCCCCATCCCAGT 62.304 60.000 0.00 0.00 0.00 4.00
2160 3187 1.466788 ATCCCCATCCCCATCCCAG 60.467 63.158 0.00 0.00 0.00 4.45
2161 3188 1.779644 CATCCCCATCCCCATCCCA 60.780 63.158 0.00 0.00 0.00 4.37
2162 3189 3.184291 CATCCCCATCCCCATCCC 58.816 66.667 0.00 0.00 0.00 3.85
2163 3190 1.807771 ATGCATCCCCATCCCCATCC 61.808 60.000 0.00 0.00 0.00 3.51
2164 3191 0.613853 CATGCATCCCCATCCCCATC 60.614 60.000 0.00 0.00 0.00 3.51
2165 3192 1.467886 CATGCATCCCCATCCCCAT 59.532 57.895 0.00 0.00 0.00 4.00
2166 3193 2.936828 CATGCATCCCCATCCCCA 59.063 61.111 0.00 0.00 0.00 4.96
2168 3195 0.323178 CTAGCATGCATCCCCATCCC 60.323 60.000 21.98 0.00 0.00 3.85
2169 3196 0.964358 GCTAGCATGCATCCCCATCC 60.964 60.000 21.98 0.00 0.00 3.51
2232 3298 7.874940 TCCCATACATGTGTAATACGTAGTAC 58.125 38.462 22.70 22.70 37.90 2.73
2238 3304 7.323420 AGATGATCCCATACATGTGTAATACG 58.677 38.462 9.11 0.00 33.76 3.06
2241 3307 9.276791 AGATAGATGATCCCATACATGTGTAAT 57.723 33.333 9.11 0.00 34.80 1.89
2242 3308 8.670521 AGATAGATGATCCCATACATGTGTAA 57.329 34.615 9.11 0.00 34.80 2.41
2243 3309 8.118600 AGAGATAGATGATCCCATACATGTGTA 58.881 37.037 9.11 0.00 34.80 2.90
2245 3311 7.123847 TGAGAGATAGATGATCCCATACATGTG 59.876 40.741 9.11 0.00 34.80 3.21
2246 3312 7.187676 TGAGAGATAGATGATCCCATACATGT 58.812 38.462 2.69 2.69 34.80 3.21
2247 3313 7.201929 CCTGAGAGATAGATGATCCCATACATG 60.202 44.444 0.00 0.00 34.80 3.21
2248 3314 6.840181 CCTGAGAGATAGATGATCCCATACAT 59.160 42.308 0.00 0.00 34.80 2.29
2249 3315 6.193504 CCTGAGAGATAGATGATCCCATACA 58.806 44.000 0.00 0.00 34.80 2.29
2260 3326 3.500448 TCAGTCGCCTGAGAGATAGAT 57.500 47.619 0.00 0.00 42.80 1.98
2289 3355 1.600663 GGAGACGACAGACACACACAG 60.601 57.143 0.00 0.00 0.00 3.66
2291 3357 3.180984 GGAGACGACAGACACACAC 57.819 57.895 0.00 0.00 0.00 3.82
2324 3390 1.071071 AGATCCAACCGTCCGTTTCAA 59.929 47.619 0.00 0.00 29.93 2.69
2353 3419 5.701224 ACTAGTGGACCATTTCAAGGAAAA 58.299 37.500 0.00 0.00 35.11 2.29
2414 3481 3.204526 ACGAAACAATGAACCACCGTTA 58.795 40.909 0.00 0.00 30.30 3.18
2462 3529 1.095807 GGTGGTTTCCTCCGCTATGC 61.096 60.000 0.00 0.00 38.01 3.14
2492 3559 0.392461 GCGAAATCCCTGTGGCAGTA 60.392 55.000 0.00 0.00 0.00 2.74
2536 3604 4.673311 CGCGCTATTTAAAACTTTGTGTGT 59.327 37.500 5.56 0.00 0.00 3.72
2537 3605 4.431086 GCGCGCTATTTAAAACTTTGTGTG 60.431 41.667 26.67 0.00 0.00 3.82
2538 3606 3.666797 GCGCGCTATTTAAAACTTTGTGT 59.333 39.130 26.67 0.00 0.00 3.72
2539 3607 3.911964 AGCGCGCTATTTAAAACTTTGTG 59.088 39.130 35.79 0.00 0.00 3.33
2540 3608 4.155310 AGCGCGCTATTTAAAACTTTGT 57.845 36.364 35.79 1.11 0.00 2.83
2541 3609 5.275280 GCTTAGCGCGCTATTTAAAACTTTG 60.275 40.000 38.51 15.49 0.00 2.77
2542 3610 4.791676 GCTTAGCGCGCTATTTAAAACTTT 59.208 37.500 38.51 13.72 0.00 2.66
2543 3611 4.142773 TGCTTAGCGCGCTATTTAAAACTT 60.143 37.500 38.51 13.94 43.27 2.66
2544 3612 3.372822 TGCTTAGCGCGCTATTTAAAACT 59.627 39.130 38.51 14.50 43.27 2.66
2545 3613 3.676540 TGCTTAGCGCGCTATTTAAAAC 58.323 40.909 38.51 22.00 43.27 2.43
2546 3614 4.272504 AGATGCTTAGCGCGCTATTTAAAA 59.727 37.500 38.51 24.43 43.27 1.52
2547 3615 3.807622 AGATGCTTAGCGCGCTATTTAAA 59.192 39.130 38.51 25.16 43.27 1.52
2548 3616 3.390135 AGATGCTTAGCGCGCTATTTAA 58.610 40.909 38.51 25.53 43.27 1.52
2549 3617 3.026630 AGATGCTTAGCGCGCTATTTA 57.973 42.857 38.51 26.65 43.27 1.40
2550 3618 1.871080 AGATGCTTAGCGCGCTATTT 58.129 45.000 38.51 23.54 43.27 1.40
2551 3619 1.871080 AAGATGCTTAGCGCGCTATT 58.129 45.000 38.51 26.01 43.27 1.73
2552 3620 2.600731 CTAAGATGCTTAGCGCGCTAT 58.399 47.619 38.51 26.50 43.27 2.97
2553 3621 1.930817 GCTAAGATGCTTAGCGCGCTA 60.931 52.381 35.48 35.48 43.27 4.26
2554 3622 1.218230 GCTAAGATGCTTAGCGCGCT 61.218 55.000 38.01 38.01 43.27 5.92
2555 3623 1.202816 GCTAAGATGCTTAGCGCGC 59.797 57.895 26.66 26.66 43.27 6.86
2559 3627 1.856012 CGCCGCTAAGATGCTTAGC 59.144 57.895 22.75 22.75 42.82 3.09
2560 3628 0.875908 TGCGCCGCTAAGATGCTTAG 60.876 55.000 11.67 9.30 0.00 2.18
2561 3629 1.142965 TGCGCCGCTAAGATGCTTA 59.857 52.632 11.67 0.00 0.00 3.09
2562 3630 2.125147 TGCGCCGCTAAGATGCTT 60.125 55.556 11.67 0.00 0.00 3.91
2563 3631 2.892425 GTGCGCCGCTAAGATGCT 60.892 61.111 11.67 0.00 0.00 3.79
2564 3632 3.941836 GGTGCGCCGCTAAGATGC 61.942 66.667 11.67 0.00 0.00 3.91
2565 3633 2.202932 AGGTGCGCCGCTAAGATG 60.203 61.111 11.67 0.00 40.50 2.90
2566 3634 1.961180 AAGAGGTGCGCCGCTAAGAT 61.961 55.000 23.47 4.41 44.34 2.40
2567 3635 2.558554 GAAGAGGTGCGCCGCTAAGA 62.559 60.000 23.47 0.00 44.34 2.10
2568 3636 2.125512 AAGAGGTGCGCCGCTAAG 60.126 61.111 23.47 0.00 44.34 2.18
2569 3637 2.125673 GAAGAGGTGCGCCGCTAA 60.126 61.111 23.47 0.00 44.34 3.09
2570 3638 4.143333 GGAAGAGGTGCGCCGCTA 62.143 66.667 23.47 0.00 44.34 4.26
2573 3641 2.040544 ATTTGGAAGAGGTGCGCCG 61.041 57.895 11.42 0.00 40.50 6.46
2574 3642 1.508088 CATTTGGAAGAGGTGCGCC 59.492 57.895 8.71 8.71 0.00 6.53
2575 3643 1.153958 GCATTTGGAAGAGGTGCGC 60.154 57.895 0.00 0.00 0.00 6.09
2576 3644 1.737838 TAGCATTTGGAAGAGGTGCG 58.262 50.000 0.00 0.00 40.54 5.34
2577 3645 3.251972 GCTATAGCATTTGGAAGAGGTGC 59.748 47.826 20.01 0.00 41.59 5.01
2578 3646 3.496130 CGCTATAGCATTTGGAAGAGGTG 59.504 47.826 23.99 0.00 42.21 4.00
2579 3647 3.134804 ACGCTATAGCATTTGGAAGAGGT 59.865 43.478 23.99 6.60 42.21 3.85
2580 3648 3.496130 CACGCTATAGCATTTGGAAGAGG 59.504 47.826 23.99 5.98 42.21 3.69
2581 3649 3.059325 GCACGCTATAGCATTTGGAAGAG 60.059 47.826 23.99 6.48 42.21 2.85
2582 3650 2.872245 GCACGCTATAGCATTTGGAAGA 59.128 45.455 23.99 0.00 42.21 2.87
2583 3651 2.874701 AGCACGCTATAGCATTTGGAAG 59.125 45.455 23.99 7.87 42.21 3.46
2584 3652 2.917933 AGCACGCTATAGCATTTGGAA 58.082 42.857 23.99 0.00 42.21 3.53
2585 3653 2.620251 AGCACGCTATAGCATTTGGA 57.380 45.000 23.99 0.00 42.21 3.53
2586 3654 5.709011 CTATAGCACGCTATAGCATTTGG 57.291 43.478 25.42 9.98 46.26 3.28
2594 3662 1.400846 GCTCCGCTATAGCACGCTATA 59.599 52.381 23.99 15.99 42.21 1.31
2595 3663 0.171455 GCTCCGCTATAGCACGCTAT 59.829 55.000 23.99 15.45 42.21 2.97
2596 3664 0.889638 AGCTCCGCTATAGCACGCTA 60.890 55.000 23.99 0.39 42.62 4.26
2597 3665 0.889638 TAGCTCCGCTATAGCACGCT 60.890 55.000 25.78 25.78 42.62 5.07
2598 3666 1.579932 TAGCTCCGCTATAGCACGC 59.420 57.895 23.99 20.26 42.62 5.34
2606 3674 2.868196 CGCGCTATAGCTCCGCTA 59.132 61.111 21.98 0.00 45.55 4.26
2609 3677 0.179161 AATAGCGCGCTATAGCTCCG 60.179 55.000 43.81 22.32 43.44 4.63
2610 3678 1.997669 AAATAGCGCGCTATAGCTCC 58.002 50.000 43.81 10.26 43.44 4.70
2611 3679 5.511088 TTTTAAATAGCGCGCTATAGCTC 57.489 39.130 43.81 13.77 43.44 4.09
2612 3680 5.408604 ACATTTTAAATAGCGCGCTATAGCT 59.591 36.000 43.81 33.17 46.53 3.32
2613 3681 5.618561 ACATTTTAAATAGCGCGCTATAGC 58.381 37.500 43.81 15.09 38.20 2.97
2614 3682 9.755064 ATAAACATTTTAAATAGCGCGCTATAG 57.245 29.630 43.81 29.40 38.20 1.31
2616 3684 9.113876 GAATAAACATTTTAAATAGCGCGCTAT 57.886 29.630 40.32 40.32 40.63 2.97
2617 3685 8.123575 TGAATAAACATTTTAAATAGCGCGCTA 58.876 29.630 39.72 39.72 0.00 4.26
2618 3686 6.970043 TGAATAAACATTTTAAATAGCGCGCT 59.030 30.769 38.01 38.01 0.00 5.92
2619 3687 7.144007 TGAATAAACATTTTAAATAGCGCGC 57.856 32.000 26.66 26.66 0.00 6.86
2634 3702 9.829507 ACTTTGATCCAAACAAATGAATAAACA 57.170 25.926 0.00 0.00 36.79 2.83
2637 3705 9.912634 GAGACTTTGATCCAAACAAATGAATAA 57.087 29.630 0.00 0.00 36.79 1.40
2638 3706 9.300681 AGAGACTTTGATCCAAACAAATGAATA 57.699 29.630 0.00 0.00 36.79 1.75
2639 3707 8.186709 AGAGACTTTGATCCAAACAAATGAAT 57.813 30.769 0.00 0.00 36.79 2.57
2640 3708 7.587037 AGAGACTTTGATCCAAACAAATGAA 57.413 32.000 0.00 0.00 36.79 2.57
2641 3709 7.587037 AAGAGACTTTGATCCAAACAAATGA 57.413 32.000 0.00 0.00 36.79 2.57
2642 3710 7.540055 GCTAAGAGACTTTGATCCAAACAAATG 59.460 37.037 0.00 0.00 36.79 2.32
2643 3711 7.573843 CGCTAAGAGACTTTGATCCAAACAAAT 60.574 37.037 0.00 0.00 36.79 2.32
2644 3712 6.293407 CGCTAAGAGACTTTGATCCAAACAAA 60.293 38.462 0.00 0.00 36.15 2.83
2645 3713 5.179368 CGCTAAGAGACTTTGATCCAAACAA 59.821 40.000 0.00 0.00 0.00 2.83
2646 3714 4.690748 CGCTAAGAGACTTTGATCCAAACA 59.309 41.667 0.00 0.00 0.00 2.83
2647 3715 4.436183 GCGCTAAGAGACTTTGATCCAAAC 60.436 45.833 0.00 0.00 0.00 2.93
2648 3716 3.684788 GCGCTAAGAGACTTTGATCCAAA 59.315 43.478 0.00 0.00 0.00 3.28
2649 3717 3.262420 GCGCTAAGAGACTTTGATCCAA 58.738 45.455 0.00 0.00 0.00 3.53
2650 3718 2.233676 TGCGCTAAGAGACTTTGATCCA 59.766 45.455 9.73 0.00 0.00 3.41
2651 3719 2.893637 TGCGCTAAGAGACTTTGATCC 58.106 47.619 9.73 0.00 0.00 3.36
2652 3720 4.032331 GTCTTGCGCTAAGAGACTTTGATC 59.968 45.833 18.44 4.68 45.71 2.92
2653 3721 3.929610 GTCTTGCGCTAAGAGACTTTGAT 59.070 43.478 18.44 0.00 45.71 2.57
2654 3722 3.318017 GTCTTGCGCTAAGAGACTTTGA 58.682 45.455 18.44 0.00 45.71 2.69
2655 3723 2.413453 GGTCTTGCGCTAAGAGACTTTG 59.587 50.000 22.91 0.00 45.71 2.77
2656 3724 2.300437 AGGTCTTGCGCTAAGAGACTTT 59.700 45.455 22.91 14.31 45.71 2.66
2657 3725 1.896465 AGGTCTTGCGCTAAGAGACTT 59.104 47.619 22.91 17.23 45.71 3.01
2658 3726 1.551452 AGGTCTTGCGCTAAGAGACT 58.449 50.000 22.91 18.83 45.71 3.24
2659 3727 2.371910 AAGGTCTTGCGCTAAGAGAC 57.628 50.000 18.44 18.59 45.71 3.36
2660 3728 3.067106 CAAAAGGTCTTGCGCTAAGAGA 58.933 45.455 18.44 9.99 45.71 3.10
2661 3729 3.067106 TCAAAAGGTCTTGCGCTAAGAG 58.933 45.455 18.44 8.07 45.71 2.85
2662 3730 3.120321 TCAAAAGGTCTTGCGCTAAGA 57.880 42.857 9.73 13.31 43.01 2.10
2663 3731 3.896648 TTCAAAAGGTCTTGCGCTAAG 57.103 42.857 9.73 11.02 37.76 2.18
2664 3732 4.356289 GTTTTCAAAAGGTCTTGCGCTAA 58.644 39.130 9.73 0.00 0.00 3.09
2665 3733 3.547214 CGTTTTCAAAAGGTCTTGCGCTA 60.547 43.478 9.73 0.00 0.00 4.26
2666 3734 2.794631 CGTTTTCAAAAGGTCTTGCGCT 60.795 45.455 9.73 0.00 0.00 5.92
2667 3735 1.516864 CGTTTTCAAAAGGTCTTGCGC 59.483 47.619 0.00 0.00 0.00 6.09
2668 3736 1.516864 GCGTTTTCAAAAGGTCTTGCG 59.483 47.619 4.57 0.00 0.00 4.85
2669 3737 2.809446 AGCGTTTTCAAAAGGTCTTGC 58.191 42.857 4.57 0.00 0.00 4.01
2670 3738 5.795441 GCTATAGCGTTTTCAAAAGGTCTTG 59.205 40.000 9.40 0.00 31.10 3.02
2671 3739 5.939457 GCTATAGCGTTTTCAAAAGGTCTT 58.061 37.500 9.40 0.00 31.10 3.01
2672 3740 5.547181 GCTATAGCGTTTTCAAAAGGTCT 57.453 39.130 9.40 5.01 31.10 3.85
2689 3757 2.025226 AGCTCCCCTATAGCACGCTATA 60.025 50.000 15.99 15.99 42.62 1.31
2690 3758 1.187087 GCTCCCCTATAGCACGCTAT 58.813 55.000 15.45 15.45 41.58 2.97
2691 3759 0.112606 AGCTCCCCTATAGCACGCTA 59.887 55.000 0.39 0.39 42.62 4.26
2692 3760 0.112606 TAGCTCCCCTATAGCACGCT 59.887 55.000 0.00 0.00 42.62 5.07
2693 3761 1.187087 ATAGCTCCCCTATAGCACGC 58.813 55.000 0.00 0.00 42.62 5.34
2699 3767 2.933825 AGCCCACTATAGCTCCCCTATA 59.066 50.000 0.00 0.00 37.84 1.31
2700 3768 1.725182 AGCCCACTATAGCTCCCCTAT 59.275 52.381 0.00 0.00 39.95 2.57
2701 3769 1.167943 AGCCCACTATAGCTCCCCTA 58.832 55.000 0.00 0.00 32.71 3.53
2702 3770 1.167943 TAGCCCACTATAGCTCCCCT 58.832 55.000 0.00 0.00 40.56 4.79
2703 3771 2.255770 ATAGCCCACTATAGCTCCCC 57.744 55.000 0.00 0.00 40.56 4.81
2704 3772 5.757099 TTAAATAGCCCACTATAGCTCCC 57.243 43.478 0.00 0.00 38.18 4.30
2705 3773 6.996282 TGTTTTAAATAGCCCACTATAGCTCC 59.004 38.462 0.00 0.00 38.18 4.70
2706 3774 7.715686 ACTGTTTTAAATAGCCCACTATAGCTC 59.284 37.037 0.00 0.00 38.18 4.09
2707 3775 7.499232 CACTGTTTTAAATAGCCCACTATAGCT 59.501 37.037 0.00 0.00 38.18 3.32
2708 3776 7.639945 CACTGTTTTAAATAGCCCACTATAGC 58.360 38.462 0.00 0.00 38.18 2.97
2709 3777 7.499232 AGCACTGTTTTAAATAGCCCACTATAG 59.501 37.037 1.36 0.00 38.18 1.31
2710 3778 7.282224 CAGCACTGTTTTAAATAGCCCACTATA 59.718 37.037 1.36 0.00 38.18 1.31
2711 3779 6.095440 CAGCACTGTTTTAAATAGCCCACTAT 59.905 38.462 1.36 0.00 41.01 2.12
2712 3780 5.414454 CAGCACTGTTTTAAATAGCCCACTA 59.586 40.000 1.36 0.00 0.00 2.74
2713 3781 4.218417 CAGCACTGTTTTAAATAGCCCACT 59.782 41.667 1.36 0.00 0.00 4.00
2714 3782 4.217550 TCAGCACTGTTTTAAATAGCCCAC 59.782 41.667 1.36 0.00 0.00 4.61
2715 3783 4.217550 GTCAGCACTGTTTTAAATAGCCCA 59.782 41.667 1.36 0.00 0.00 5.36
2716 3784 4.217550 TGTCAGCACTGTTTTAAATAGCCC 59.782 41.667 1.36 0.00 0.00 5.19
2717 3785 5.154222 GTGTCAGCACTGTTTTAAATAGCC 58.846 41.667 1.36 0.00 42.13 3.93
2718 3786 5.757886 TGTGTCAGCACTGTTTTAAATAGC 58.242 37.500 1.36 0.00 45.44 2.97
2734 3802 2.896801 GCCGGTTGTGCTGTGTCAG 61.897 63.158 1.90 0.00 34.12 3.51
2735 3803 2.899838 GCCGGTTGTGCTGTGTCA 60.900 61.111 1.90 0.00 0.00 3.58
2736 3804 3.660111 GGCCGGTTGTGCTGTGTC 61.660 66.667 1.90 0.00 0.00 3.67
2737 3805 4.189580 AGGCCGGTTGTGCTGTGT 62.190 61.111 1.90 0.00 0.00 3.72
2738 3806 3.663176 CAGGCCGGTTGTGCTGTG 61.663 66.667 1.90 0.00 0.00 3.66
2741 3809 4.892965 TTGCAGGCCGGTTGTGCT 62.893 61.111 20.71 0.00 38.09 4.40
2742 3810 2.713927 AAATTGCAGGCCGGTTGTGC 62.714 55.000 15.44 15.44 37.73 4.57
2743 3811 0.600557 TAAATTGCAGGCCGGTTGTG 59.399 50.000 1.90 0.00 0.00 3.33
2744 3812 1.555967 ATAAATTGCAGGCCGGTTGT 58.444 45.000 1.90 0.00 0.00 3.32
2745 3813 3.443976 GTTATAAATTGCAGGCCGGTTG 58.556 45.455 1.90 3.18 0.00 3.77
2746 3814 2.429250 GGTTATAAATTGCAGGCCGGTT 59.571 45.455 1.90 0.00 0.00 4.44
2747 3815 2.028876 GGTTATAAATTGCAGGCCGGT 58.971 47.619 1.90 0.00 0.00 5.28
2748 3816 2.028130 TGGTTATAAATTGCAGGCCGG 58.972 47.619 0.00 0.00 0.00 6.13
2749 3817 2.540769 CGTGGTTATAAATTGCAGGCCG 60.541 50.000 0.00 0.00 0.00 6.13
2750 3818 2.685897 TCGTGGTTATAAATTGCAGGCC 59.314 45.455 0.00 0.00 0.00 5.19
2751 3819 4.364415 TTCGTGGTTATAAATTGCAGGC 57.636 40.909 0.00 0.00 0.00 4.85
2752 3820 6.795399 AGAATTCGTGGTTATAAATTGCAGG 58.205 36.000 0.00 0.00 0.00 4.85
2753 3821 9.599322 GATAGAATTCGTGGTTATAAATTGCAG 57.401 33.333 0.00 0.00 0.00 4.41
2754 3822 8.564574 GGATAGAATTCGTGGTTATAAATTGCA 58.435 33.333 0.00 0.00 0.00 4.08
2755 3823 8.564574 TGGATAGAATTCGTGGTTATAAATTGC 58.435 33.333 0.00 0.00 0.00 3.56
2756 3824 9.878599 GTGGATAGAATTCGTGGTTATAAATTG 57.121 33.333 0.00 0.00 0.00 2.32
2757 3825 9.847224 AGTGGATAGAATTCGTGGTTATAAATT 57.153 29.630 0.00 0.00 0.00 1.82
2759 3827 9.976511 CTAGTGGATAGAATTCGTGGTTATAAA 57.023 33.333 0.00 0.00 32.76 1.40
2760 3828 9.139734 ACTAGTGGATAGAATTCGTGGTTATAA 57.860 33.333 0.00 0.00 35.30 0.98
2761 3829 8.701908 ACTAGTGGATAGAATTCGTGGTTATA 57.298 34.615 0.00 0.00 35.30 0.98
2762 3830 7.598759 ACTAGTGGATAGAATTCGTGGTTAT 57.401 36.000 0.00 0.00 35.30 1.89
2763 3831 7.994911 TCTACTAGTGGATAGAATTCGTGGTTA 59.005 37.037 4.58 0.00 35.30 2.85
2764 3832 5.934402 ACTAGTGGATAGAATTCGTGGTT 57.066 39.130 0.00 0.00 35.30 3.67
2765 3833 6.363065 TCTACTAGTGGATAGAATTCGTGGT 58.637 40.000 4.58 0.00 35.30 4.16
2766 3834 6.879276 TCTACTAGTGGATAGAATTCGTGG 57.121 41.667 4.58 0.00 35.30 4.94
2767 3835 9.021863 GTTTTCTACTAGTGGATAGAATTCGTG 57.978 37.037 10.02 0.00 37.29 4.35
2768 3836 8.746530 TGTTTTCTACTAGTGGATAGAATTCGT 58.253 33.333 10.02 0.00 37.29 3.85
2769 3837 9.582431 TTGTTTTCTACTAGTGGATAGAATTCG 57.418 33.333 10.02 0.00 37.29 3.34
2771 3839 9.892130 CCTTGTTTTCTACTAGTGGATAGAATT 57.108 33.333 10.02 0.00 37.29 2.17
2772 3840 7.988028 GCCTTGTTTTCTACTAGTGGATAGAAT 59.012 37.037 10.02 0.00 37.29 2.40
2773 3841 7.180408 AGCCTTGTTTTCTACTAGTGGATAGAA 59.820 37.037 10.02 5.77 35.98 2.10
2774 3842 6.668283 AGCCTTGTTTTCTACTAGTGGATAGA 59.332 38.462 10.02 0.00 35.30 1.98
2775 3843 6.879400 AGCCTTGTTTTCTACTAGTGGATAG 58.121 40.000 10.02 0.00 37.53 2.08
2776 3844 6.869206 AGCCTTGTTTTCTACTAGTGGATA 57.131 37.500 10.02 2.34 0.00 2.59
2777 3845 5.763876 AGCCTTGTTTTCTACTAGTGGAT 57.236 39.130 10.02 0.00 0.00 3.41
2778 3846 5.562298 AAGCCTTGTTTTCTACTAGTGGA 57.438 39.130 4.58 4.58 0.00 4.02
2779 3847 5.048713 CCAAAGCCTTGTTTTCTACTAGTGG 60.049 44.000 5.39 1.87 0.00 4.00
2780 3848 5.531287 ACCAAAGCCTTGTTTTCTACTAGTG 59.469 40.000 5.39 0.00 0.00 2.74
2781 3849 5.691896 ACCAAAGCCTTGTTTTCTACTAGT 58.308 37.500 0.00 0.00 0.00 2.57
2782 3850 5.181433 GGACCAAAGCCTTGTTTTCTACTAG 59.819 44.000 0.00 0.00 0.00 2.57
2783 3851 5.067954 GGACCAAAGCCTTGTTTTCTACTA 58.932 41.667 0.00 0.00 0.00 1.82
2784 3852 3.889538 GGACCAAAGCCTTGTTTTCTACT 59.110 43.478 0.00 0.00 0.00 2.57
2785 3853 3.634910 TGGACCAAAGCCTTGTTTTCTAC 59.365 43.478 0.00 0.00 0.00 2.59
2786 3854 3.904717 TGGACCAAAGCCTTGTTTTCTA 58.095 40.909 0.00 0.00 0.00 2.10
2787 3855 2.745968 TGGACCAAAGCCTTGTTTTCT 58.254 42.857 0.00 0.00 0.00 2.52
2788 3856 3.535280 TTGGACCAAAGCCTTGTTTTC 57.465 42.857 3.84 0.00 0.00 2.29
2789 3857 3.605634 GTTTGGACCAAAGCCTTGTTTT 58.394 40.909 20.14 0.00 33.82 2.43
2790 3858 2.093181 GGTTTGGACCAAAGCCTTGTTT 60.093 45.455 30.56 0.00 45.77 2.83
2791 3859 1.484653 GGTTTGGACCAAAGCCTTGTT 59.515 47.619 30.56 0.00 45.77 2.83
2792 3860 1.119684 GGTTTGGACCAAAGCCTTGT 58.880 50.000 30.56 0.00 45.77 3.16
2793 3861 3.986970 GGTTTGGACCAAAGCCTTG 57.013 52.632 30.56 0.00 45.77 3.61
2802 3870 5.801531 AATACCTTTTTCTGGTTTGGACC 57.198 39.130 0.00 0.00 46.71 4.46
2803 3871 8.033038 GGATTAATACCTTTTTCTGGTTTGGAC 58.967 37.037 0.00 0.00 38.88 4.02
2804 3872 7.179516 GGGATTAATACCTTTTTCTGGTTTGGA 59.820 37.037 9.72 0.00 38.88 3.53
2805 3873 7.327975 GGGATTAATACCTTTTTCTGGTTTGG 58.672 38.462 9.72 0.00 38.88 3.28
2806 3874 7.033185 CGGGATTAATACCTTTTTCTGGTTTG 58.967 38.462 15.00 0.00 38.88 2.93
2807 3875 6.153851 CCGGGATTAATACCTTTTTCTGGTTT 59.846 38.462 15.00 0.00 38.88 3.27
2808 3876 5.655090 CCGGGATTAATACCTTTTTCTGGTT 59.345 40.000 15.00 0.00 38.88 3.67
2809 3877 5.198207 CCGGGATTAATACCTTTTTCTGGT 58.802 41.667 15.00 0.00 41.28 4.00
2810 3878 5.198207 ACCGGGATTAATACCTTTTTCTGG 58.802 41.667 15.00 8.82 0.00 3.86
2811 3879 6.602009 AGAACCGGGATTAATACCTTTTTCTG 59.398 38.462 15.00 0.00 0.00 3.02
2812 3880 6.728411 AGAACCGGGATTAATACCTTTTTCT 58.272 36.000 15.00 14.63 0.00 2.52
2813 3881 6.039047 GGAGAACCGGGATTAATACCTTTTTC 59.961 42.308 15.00 12.85 0.00 2.29
2814 3882 5.889853 GGAGAACCGGGATTAATACCTTTTT 59.110 40.000 15.00 4.76 0.00 1.94
2815 3883 5.193124 AGGAGAACCGGGATTAATACCTTTT 59.807 40.000 15.00 7.21 41.83 2.27
2816 3884 4.725304 AGGAGAACCGGGATTAATACCTTT 59.275 41.667 15.00 7.57 41.83 3.11
2817 3885 4.304659 AGGAGAACCGGGATTAATACCTT 58.695 43.478 15.00 3.00 41.83 3.50
2818 3886 3.937751 AGGAGAACCGGGATTAATACCT 58.062 45.455 15.00 0.00 41.83 3.08
2819 3887 4.321527 CGTAGGAGAACCGGGATTAATACC 60.322 50.000 6.32 6.65 41.83 2.73
2820 3888 4.520492 TCGTAGGAGAACCGGGATTAATAC 59.480 45.833 6.32 1.09 41.83 1.89
2821 3889 4.728772 TCGTAGGAGAACCGGGATTAATA 58.271 43.478 6.32 0.00 41.83 0.98
2822 3890 3.569491 TCGTAGGAGAACCGGGATTAAT 58.431 45.455 6.32 0.00 41.83 1.40
2823 3891 3.017048 TCGTAGGAGAACCGGGATTAA 57.983 47.619 6.32 0.00 41.83 1.40
2824 3892 2.689983 GTTCGTAGGAGAACCGGGATTA 59.310 50.000 6.32 0.00 43.33 1.75
2825 3893 1.479730 GTTCGTAGGAGAACCGGGATT 59.520 52.381 6.32 0.00 43.33 3.01
2826 3894 1.109609 GTTCGTAGGAGAACCGGGAT 58.890 55.000 6.32 0.00 43.33 3.85
2827 3895 2.571548 GTTCGTAGGAGAACCGGGA 58.428 57.895 6.32 0.00 43.33 5.14
2833 3901 1.271543 TGGTCTCGGTTCGTAGGAGAA 60.272 52.381 0.00 0.00 38.45 2.87
2834 3902 0.325933 TGGTCTCGGTTCGTAGGAGA 59.674 55.000 0.00 0.00 34.61 3.71
2835 3903 1.065701 CATGGTCTCGGTTCGTAGGAG 59.934 57.143 0.00 0.00 0.00 3.69
2836 3904 1.100510 CATGGTCTCGGTTCGTAGGA 58.899 55.000 0.00 0.00 0.00 2.94
2837 3905 0.815734 ACATGGTCTCGGTTCGTAGG 59.184 55.000 0.00 0.00 0.00 3.18
2838 3906 1.909376 CACATGGTCTCGGTTCGTAG 58.091 55.000 0.00 0.00 0.00 3.51
2839 3907 0.108992 GCACATGGTCTCGGTTCGTA 60.109 55.000 0.00 0.00 0.00 3.43
2840 3908 1.374252 GCACATGGTCTCGGTTCGT 60.374 57.895 0.00 0.00 0.00 3.85
2841 3909 0.740868 ATGCACATGGTCTCGGTTCG 60.741 55.000 0.00 0.00 0.00 3.95
2842 3910 1.009829 GATGCACATGGTCTCGGTTC 58.990 55.000 0.00 0.00 0.00 3.62
2843 3911 0.324614 TGATGCACATGGTCTCGGTT 59.675 50.000 0.00 0.00 0.00 4.44
2844 3912 0.107993 CTGATGCACATGGTCTCGGT 60.108 55.000 0.00 0.00 0.00 4.69
2845 3913 0.107993 ACTGATGCACATGGTCTCGG 60.108 55.000 0.00 0.00 0.00 4.63
2846 3914 1.284657 GACTGATGCACATGGTCTCG 58.715 55.000 0.00 0.00 0.00 4.04
2847 3915 1.661341 GGACTGATGCACATGGTCTC 58.339 55.000 0.00 0.00 0.00 3.36
2848 3916 0.254178 GGGACTGATGCACATGGTCT 59.746 55.000 0.00 0.00 0.00 3.85
2849 3917 1.091771 CGGGACTGATGCACATGGTC 61.092 60.000 0.00 0.00 0.00 4.02
2850 3918 1.078214 CGGGACTGATGCACATGGT 60.078 57.895 0.00 0.00 0.00 3.55
2851 3919 0.179037 ATCGGGACTGATGCACATGG 60.179 55.000 0.00 0.00 0.00 3.66
2852 3920 1.600957 GAATCGGGACTGATGCACATG 59.399 52.381 0.00 0.00 0.00 3.21
2853 3921 1.210234 TGAATCGGGACTGATGCACAT 59.790 47.619 0.00 0.00 28.60 3.21
2854 3922 0.612744 TGAATCGGGACTGATGCACA 59.387 50.000 0.00 0.00 28.60 4.57
2855 3923 1.600957 CATGAATCGGGACTGATGCAC 59.399 52.381 3.94 0.00 36.73 4.57
2856 3924 1.485895 TCATGAATCGGGACTGATGCA 59.514 47.619 4.32 4.32 38.28 3.96
2857 3925 2.141517 CTCATGAATCGGGACTGATGC 58.858 52.381 0.00 0.00 0.00 3.91
2858 3926 2.763933 CCTCATGAATCGGGACTGATG 58.236 52.381 0.00 0.00 0.00 3.07
2859 3927 1.071385 GCCTCATGAATCGGGACTGAT 59.929 52.381 2.97 0.00 0.00 2.90
2860 3928 0.465705 GCCTCATGAATCGGGACTGA 59.534 55.000 2.97 0.00 0.00 3.41
2861 3929 0.533755 GGCCTCATGAATCGGGACTG 60.534 60.000 0.00 0.00 0.00 3.51
2862 3930 0.982852 TGGCCTCATGAATCGGGACT 60.983 55.000 3.32 0.00 0.00 3.85
2863 3931 0.533755 CTGGCCTCATGAATCGGGAC 60.534 60.000 3.32 0.23 0.00 4.46
2864 3932 1.699054 CCTGGCCTCATGAATCGGGA 61.699 60.000 3.32 0.00 0.00 5.14
2865 3933 1.228063 CCTGGCCTCATGAATCGGG 60.228 63.158 3.32 0.02 0.00 5.14
2866 3934 0.533755 GTCCTGGCCTCATGAATCGG 60.534 60.000 3.32 0.00 0.00 4.18
2867 3935 0.877649 CGTCCTGGCCTCATGAATCG 60.878 60.000 3.32 0.00 0.00 3.34
2868 3936 1.162800 GCGTCCTGGCCTCATGAATC 61.163 60.000 3.32 0.00 0.00 2.52
2869 3937 1.153086 GCGTCCTGGCCTCATGAAT 60.153 57.895 3.32 0.00 0.00 2.57
2870 3938 0.975556 TAGCGTCCTGGCCTCATGAA 60.976 55.000 3.32 0.00 0.00 2.57
2871 3939 1.381191 TAGCGTCCTGGCCTCATGA 60.381 57.895 3.32 0.00 0.00 3.07
2872 3940 1.068753 CTAGCGTCCTGGCCTCATG 59.931 63.158 3.32 0.00 0.00 3.07
2873 3941 2.801631 GCTAGCGTCCTGGCCTCAT 61.802 63.158 3.32 0.00 39.43 2.90
2874 3942 3.461773 GCTAGCGTCCTGGCCTCA 61.462 66.667 3.32 0.00 39.43 3.86
2896 3964 1.452108 GGACAAATGGCTCCCGAGG 60.452 63.158 0.00 0.00 0.00 4.63
2897 3965 1.452108 GGGACAAATGGCTCCCGAG 60.452 63.158 0.00 0.00 36.97 4.63
2898 3966 2.674754 GGGACAAATGGCTCCCGA 59.325 61.111 0.00 0.00 36.97 5.14
2900 3968 2.440247 CCGGGACAAATGGCTCCC 60.440 66.667 0.00 0.00 42.73 4.30
2901 3969 0.898326 AAACCGGGACAAATGGCTCC 60.898 55.000 6.32 0.00 0.00 4.70
2902 3970 0.243636 CAAACCGGGACAAATGGCTC 59.756 55.000 6.32 0.00 0.00 4.70
2903 3971 0.469144 ACAAACCGGGACAAATGGCT 60.469 50.000 6.32 0.00 0.00 4.75
2904 3972 0.038618 GACAAACCGGGACAAATGGC 60.039 55.000 6.32 0.00 0.00 4.40
2905 3973 1.269448 CAGACAAACCGGGACAAATGG 59.731 52.381 6.32 0.00 0.00 3.16
2906 3974 2.226330 TCAGACAAACCGGGACAAATG 58.774 47.619 6.32 0.00 0.00 2.32
2907 3975 2.649531 TCAGACAAACCGGGACAAAT 57.350 45.000 6.32 0.00 0.00 2.32
2908 3976 2.500229 GATCAGACAAACCGGGACAAA 58.500 47.619 6.32 0.00 0.00 2.83
2909 3977 1.271163 GGATCAGACAAACCGGGACAA 60.271 52.381 6.32 0.00 0.00 3.18
2910 3978 0.323629 GGATCAGACAAACCGGGACA 59.676 55.000 6.32 0.00 0.00 4.02
2911 3979 0.392595 GGGATCAGACAAACCGGGAC 60.393 60.000 6.32 0.00 0.00 4.46
2912 3980 0.546747 AGGGATCAGACAAACCGGGA 60.547 55.000 6.32 0.00 0.00 5.14
2913 3981 0.328258 AAGGGATCAGACAAACCGGG 59.672 55.000 6.32 0.00 0.00 5.73
2914 3982 1.453155 CAAGGGATCAGACAAACCGG 58.547 55.000 0.00 0.00 0.00 5.28
2915 3983 1.271379 ACCAAGGGATCAGACAAACCG 60.271 52.381 0.00 0.00 0.00 4.44
2916 3984 2.437413 GACCAAGGGATCAGACAAACC 58.563 52.381 0.00 0.00 0.00 3.27
2917 3985 2.437413 GGACCAAGGGATCAGACAAAC 58.563 52.381 0.00 0.00 0.00 2.93
2918 3986 1.354368 GGGACCAAGGGATCAGACAAA 59.646 52.381 0.00 0.00 0.00 2.83
2919 3987 0.991920 GGGACCAAGGGATCAGACAA 59.008 55.000 0.00 0.00 0.00 3.18
2920 3988 1.264749 CGGGACCAAGGGATCAGACA 61.265 60.000 0.00 0.00 0.00 3.41
2921 3989 1.522569 CGGGACCAAGGGATCAGAC 59.477 63.158 0.00 0.00 0.00 3.51
2922 3990 1.689233 CCGGGACCAAGGGATCAGA 60.689 63.158 0.00 0.00 0.00 3.27
2923 3991 1.562672 AACCGGGACCAAGGGATCAG 61.563 60.000 6.32 0.00 0.00 2.90
2924 3992 1.540367 AACCGGGACCAAGGGATCA 60.540 57.895 6.32 0.00 0.00 2.92
2925 3993 1.223763 GAACCGGGACCAAGGGATC 59.776 63.158 6.32 4.46 0.00 3.36
2926 3994 2.306384 GGAACCGGGACCAAGGGAT 61.306 63.158 6.32 0.00 0.00 3.85
2927 3995 2.931649 GGAACCGGGACCAAGGGA 60.932 66.667 6.32 0.00 0.00 4.20
2928 3996 3.253838 TGGAACCGGGACCAAGGG 61.254 66.667 17.42 2.48 32.93 3.95
2929 3997 2.221299 TCTGGAACCGGGACCAAGG 61.221 63.158 19.53 11.22 35.67 3.61
2930 3998 1.003718 GTCTGGAACCGGGACCAAG 60.004 63.158 19.53 14.30 35.67 3.61
2931 3999 1.766864 TGTCTGGAACCGGGACCAA 60.767 57.895 19.53 10.24 35.67 3.67
2932 4000 2.122769 TGTCTGGAACCGGGACCA 60.123 61.111 18.36 18.36 34.81 4.02
2933 4001 2.346365 GTGTCTGGAACCGGGACC 59.654 66.667 6.32 9.52 0.00 4.46
2934 4002 2.048503 CGTGTCTGGAACCGGGAC 60.049 66.667 6.32 3.26 0.00 4.46
2935 4003 1.833492 TTCGTGTCTGGAACCGGGA 60.833 57.895 6.32 0.00 0.00 5.14
2936 4004 1.666872 GTTCGTGTCTGGAACCGGG 60.667 63.158 6.32 0.00 38.23 5.73
2937 4005 3.946907 GTTCGTGTCTGGAACCGG 58.053 61.111 0.00 0.00 38.23 5.28
2940 4008 0.313043 TCTCGGTTCGTGTCTGGAAC 59.687 55.000 0.00 0.00 42.32 3.62
2941 4009 0.313043 GTCTCGGTTCGTGTCTGGAA 59.687 55.000 0.00 0.00 0.00 3.53
2942 4010 1.521450 GGTCTCGGTTCGTGTCTGGA 61.521 60.000 0.00 0.00 0.00 3.86
2943 4011 1.080705 GGTCTCGGTTCGTGTCTGG 60.081 63.158 0.00 0.00 0.00 3.86
2944 4012 0.031585 TTGGTCTCGGTTCGTGTCTG 59.968 55.000 0.00 0.00 0.00 3.51
2945 4013 0.966920 ATTGGTCTCGGTTCGTGTCT 59.033 50.000 0.00 0.00 0.00 3.41
2946 4014 1.068474 CATTGGTCTCGGTTCGTGTC 58.932 55.000 0.00 0.00 0.00 3.67
2947 4015 0.320421 CCATTGGTCTCGGTTCGTGT 60.320 55.000 0.00 0.00 0.00 4.49
2948 4016 1.019278 CCCATTGGTCTCGGTTCGTG 61.019 60.000 1.20 0.00 0.00 4.35
2949 4017 1.295423 CCCATTGGTCTCGGTTCGT 59.705 57.895 1.20 0.00 0.00 3.85
2950 4018 2.106683 GCCCATTGGTCTCGGTTCG 61.107 63.158 1.20 0.00 0.00 3.95
2951 4019 1.749258 GGCCCATTGGTCTCGGTTC 60.749 63.158 1.20 0.00 31.67 3.62
2952 4020 1.789576 AAGGCCCATTGGTCTCGGTT 61.790 55.000 0.00 0.00 46.17 4.44
2953 4021 2.231380 AAGGCCCATTGGTCTCGGT 61.231 57.895 0.00 0.00 46.17 4.69
2954 4022 1.750399 CAAGGCCCATTGGTCTCGG 60.750 63.158 0.00 0.00 46.17 4.63
2955 4023 2.409870 GCAAGGCCCATTGGTCTCG 61.410 63.158 0.00 0.00 46.17 4.04
2956 4024 1.000396 AGCAAGGCCCATTGGTCTC 60.000 57.895 0.00 0.00 46.17 3.36
2958 4026 3.608432 GAGCAAGGCCCATTGGTC 58.392 61.111 17.90 17.90 46.67 4.02
2959 4027 2.037847 GGAGCAAGGCCCATTGGT 59.962 61.111 9.01 9.01 43.24 3.67
2960 4028 2.056223 CAGGAGCAAGGCCCATTGG 61.056 63.158 0.00 0.00 0.00 3.16
2961 4029 2.056223 CCAGGAGCAAGGCCCATTG 61.056 63.158 0.00 0.00 0.00 2.82
2962 4030 2.361771 CCAGGAGCAAGGCCCATT 59.638 61.111 0.00 0.00 0.00 3.16
2963 4031 4.453892 GCCAGGAGCAAGGCCCAT 62.454 66.667 0.00 0.00 45.18 4.00
2973 4041 0.605319 TAAAGGTGTTGCGCCAGGAG 60.605 55.000 4.18 0.00 36.32 3.69
2974 4042 0.605319 CTAAAGGTGTTGCGCCAGGA 60.605 55.000 4.18 0.00 36.32 3.86
2975 4043 0.889186 ACTAAAGGTGTTGCGCCAGG 60.889 55.000 4.18 0.00 36.32 4.45
2976 4044 0.517316 GACTAAAGGTGTTGCGCCAG 59.483 55.000 4.18 0.00 36.32 4.85
2977 4045 0.887387 GGACTAAAGGTGTTGCGCCA 60.887 55.000 4.18 0.00 36.32 5.69
2978 4046 1.583495 GGGACTAAAGGTGTTGCGCC 61.583 60.000 4.18 0.00 0.00 6.53
2979 4047 1.873863 GGGACTAAAGGTGTTGCGC 59.126 57.895 0.00 0.00 0.00 6.09
2980 4048 1.296056 CCGGGACTAAAGGTGTTGCG 61.296 60.000 0.00 0.00 0.00 4.85
2981 4049 0.250597 ACCGGGACTAAAGGTGTTGC 60.251 55.000 6.32 0.00 36.81 4.17
2982 4050 1.877443 CAACCGGGACTAAAGGTGTTG 59.123 52.381 6.32 0.00 38.44 3.33
2983 4051 1.202842 CCAACCGGGACTAAAGGTGTT 60.203 52.381 6.32 0.00 40.01 3.32
2984 4052 0.399075 CCAACCGGGACTAAAGGTGT 59.601 55.000 6.32 0.00 40.01 4.16
2985 4053 0.399075 ACCAACCGGGACTAAAGGTG 59.601 55.000 6.32 0.00 41.15 4.00
2986 4054 0.399075 CACCAACCGGGACTAAAGGT 59.601 55.000 6.32 0.00 41.15 3.50
2987 4055 0.322187 CCACCAACCGGGACTAAAGG 60.322 60.000 6.32 0.00 41.15 3.11
2988 4056 0.958876 GCCACCAACCGGGACTAAAG 60.959 60.000 6.32 0.00 41.15 1.85
2989 4057 1.073548 GCCACCAACCGGGACTAAA 59.926 57.895 6.32 0.00 41.15 1.85
2990 4058 2.751688 GCCACCAACCGGGACTAA 59.248 61.111 6.32 0.00 41.15 2.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.