Multiple sequence alignment - TraesCS3B01G524200

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G524200 chr3B 100.000 4629 0 0 1 4629 766375724 766380352 0.000000e+00 8549.0
1 TraesCS3B01G524200 chr3D 96.902 2582 42 14 1352 3900 575598815 575596239 0.000000e+00 4290.0
2 TraesCS3B01G524200 chr3D 88.924 641 15 13 566 1161 575599454 575598825 0.000000e+00 739.0
3 TraesCS3B01G524200 chr3D 95.074 406 15 5 4123 4524 575596242 575595838 6.530000e-178 634.0
4 TraesCS3B01G524200 chr3D 91.500 200 10 7 1157 1352 533955700 533955504 7.630000e-68 268.0
5 TraesCS3B01G524200 chr3D 91.414 198 10 7 1153 1345 104098839 104099034 9.880000e-67 265.0
6 TraesCS3B01G524200 chr3D 97.872 47 1 0 4583 4629 575595847 575595801 1.070000e-11 82.4
7 TraesCS3B01G524200 chr3A 96.213 2218 50 17 1470 3663 711080122 711077915 0.000000e+00 3600.0
8 TraesCS3B01G524200 chr3A 92.537 268 6 4 602 855 711080643 711080376 5.660000e-99 372.0
9 TraesCS3B01G524200 chr3A 90.625 256 6 6 899 1136 711080368 711080113 1.610000e-84 324.0
10 TraesCS3B01G524200 chr3A 96.396 111 3 1 3689 3799 711075993 711075884 1.020000e-41 182.0
11 TraesCS3B01G524200 chr3A 85.185 162 9 9 186 347 711081189 711081043 8.020000e-33 152.0
12 TraesCS3B01G524200 chr3A 86.620 142 3 4 463 604 711080848 711080723 4.830000e-30 143.0
13 TraesCS3B01G524200 chr3A 93.651 63 4 0 4567 4629 711074151 711074089 1.370000e-15 95.3
14 TraesCS3B01G524200 chr3A 100.000 32 0 0 394 425 711080897 711080866 5.000000e-05 60.2
15 TraesCS3B01G524200 chr1D 75.514 1654 344 41 1980 3615 459521580 459523190 0.000000e+00 754.0
16 TraesCS3B01G524200 chr1D 75.287 1655 342 47 1984 3619 463007638 463009244 0.000000e+00 728.0
17 TraesCS3B01G524200 chr1D 75.058 1716 347 48 1937 3615 459626544 459624873 0.000000e+00 723.0
18 TraesCS3B01G524200 chr1D 89.655 203 17 4 1155 1355 453019117 453019317 5.940000e-64 255.0
19 TraesCS3B01G524200 chr1A 75.234 1708 349 48 1937 3615 551531752 551533414 0.000000e+00 743.0
20 TraesCS3B01G524200 chr1A 75.211 1662 334 49 1984 3619 554880714 554882323 0.000000e+00 715.0
21 TraesCS3B01G524200 chr1A 74.575 1707 313 70 1978 3615 551788008 551786354 1.820000e-178 636.0
22 TraesCS3B01G524200 chr1B 74.956 1709 355 43 1937 3615 631716565 631718230 0.000000e+00 717.0
23 TraesCS3B01G524200 chr1B 89.806 206 14 6 1155 1355 239055650 239055853 1.650000e-64 257.0
24 TraesCS3B01G524200 chr1B 74.510 612 133 19 2075 2673 634608162 634608763 1.290000e-60 244.0
25 TraesCS3B01G524200 chr1B 79.878 164 26 4 2996 3157 634114485 634114327 3.790000e-21 113.0
26 TraesCS3B01G524200 chr1B 83.186 113 19 0 3057 3169 634498395 634498283 2.280000e-18 104.0
27 TraesCS3B01G524200 chr7D 93.158 190 8 5 1153 1339 452688001 452688188 1.640000e-69 274.0
28 TraesCS3B01G524200 chr4D 93.122 189 8 5 1156 1341 163743313 163743127 5.900000e-69 272.0
29 TraesCS3B01G524200 chr4D 93.923 181 7 4 1162 1339 35722302 35722481 2.120000e-68 270.0
30 TraesCS3B01G524200 chr4D 89.655 203 16 5 1155 1355 347284064 347283865 2.140000e-63 254.0
31 TraesCS3B01G524200 chr2B 92.432 185 10 4 1163 1344 771215317 771215134 1.280000e-65 261.0
32 TraesCS3B01G524200 chr2B 92.000 75 2 1 243 317 153909119 153909049 8.190000e-18 102.0
33 TraesCS3B01G524200 chr2B 88.889 63 7 0 675 737 11561360 11561298 1.380000e-10 78.7
34 TraesCS3B01G524200 chr2B 90.000 60 6 0 675 734 12875672 12875731 1.380000e-10 78.7
35 TraesCS3B01G524200 chr2B 95.652 46 2 0 317 362 153909001 153908956 1.790000e-09 75.0
36 TraesCS3B01G524200 chr6D 84.167 120 9 4 3927 4037 86737404 86737522 1.760000e-19 108.0
37 TraesCS3B01G524200 chr5A 90.667 75 3 1 243 317 19099062 19098992 3.810000e-16 97.1
38 TraesCS3B01G524200 chr5A 95.833 48 2 0 317 364 19098943 19098896 1.380000e-10 78.7
39 TraesCS3B01G524200 chr7A 89.333 75 4 1 243 317 19711310 19711380 1.770000e-14 91.6
40 TraesCS3B01G524200 chr7A 97.917 48 1 0 317 364 19711428 19711475 2.970000e-12 84.2
41 TraesCS3B01G524200 chr7A 97.778 45 1 0 317 361 2577174 2577218 1.380000e-10 78.7
42 TraesCS3B01G524200 chrUn 95.833 48 2 0 317 364 314991667 314991714 1.380000e-10 78.7
43 TraesCS3B01G524200 chr5B 75.419 179 35 8 4457 4626 70668945 70669123 1.380000e-10 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G524200 chr3B 766375724 766380352 4628 False 8549.0000 8549 100.000000 1 4629 1 chr3B.!!$F1 4628
1 TraesCS3B01G524200 chr3D 575595801 575599454 3653 True 1436.3500 4290 94.693000 566 4629 4 chr3D.!!$R2 4063
2 TraesCS3B01G524200 chr3A 711074089 711081189 7100 True 616.0625 3600 92.653375 186 4629 8 chr3A.!!$R1 4443
3 TraesCS3B01G524200 chr1D 459521580 459523190 1610 False 754.0000 754 75.514000 1980 3615 1 chr1D.!!$F2 1635
4 TraesCS3B01G524200 chr1D 463007638 463009244 1606 False 728.0000 728 75.287000 1984 3619 1 chr1D.!!$F3 1635
5 TraesCS3B01G524200 chr1D 459624873 459626544 1671 True 723.0000 723 75.058000 1937 3615 1 chr1D.!!$R1 1678
6 TraesCS3B01G524200 chr1A 551531752 551533414 1662 False 743.0000 743 75.234000 1937 3615 1 chr1A.!!$F1 1678
7 TraesCS3B01G524200 chr1A 554880714 554882323 1609 False 715.0000 715 75.211000 1984 3619 1 chr1A.!!$F2 1635
8 TraesCS3B01G524200 chr1A 551786354 551788008 1654 True 636.0000 636 74.575000 1978 3615 1 chr1A.!!$R1 1637
9 TraesCS3B01G524200 chr1B 631716565 631718230 1665 False 717.0000 717 74.956000 1937 3615 1 chr1B.!!$F2 1678
10 TraesCS3B01G524200 chr1B 634608162 634608763 601 False 244.0000 244 74.510000 2075 2673 1 chr1B.!!$F3 598

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
105 106 0.107312 CCCTGCTTCTGAGTCCCATG 60.107 60.000 0.0 0.0 0.0 3.66 F
455 555 0.251634 GGCTTTCTCTCCAGTCCAGG 59.748 60.000 0.0 0.0 0.0 4.45 F
456 556 0.392327 GCTTTCTCTCCAGTCCAGGC 60.392 60.000 0.0 0.0 0.0 4.85 F
457 557 0.251634 CTTTCTCTCCAGTCCAGGCC 59.748 60.000 0.0 0.0 0.0 5.19 F
2069 2333 1.131883 GCCTGTGTGTCTCATGCATTC 59.868 52.381 0.0 0.0 0.0 2.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2069 2333 0.463295 AGCATCTCCATGAACGCAGG 60.463 55.000 0.00 0.00 31.82 4.85 R
2101 2365 1.215655 AAGCGCACAGTCGTTGAGTC 61.216 55.000 11.47 0.00 0.00 3.36 R
2228 2496 2.688446 GGTGCAAGGGGTAAGAATAAGC 59.312 50.000 0.00 0.00 0.00 3.09 R
2537 2808 4.457603 GCGAATATTCTGAGCTCCTCTAGA 59.542 45.833 12.15 4.15 0.00 2.43 R
4087 7862 0.033228 GCGCCTGATCTGCTGTCTAT 59.967 55.000 0.00 0.00 0.00 1.98 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.879002 ATCATCATCGTGAACTCGCT 57.121 45.000 0.00 0.00 0.00 4.93
20 21 1.913317 TCATCATCGTGAACTCGCTG 58.087 50.000 0.00 0.00 0.00 5.18
21 22 0.299895 CATCATCGTGAACTCGCTGC 59.700 55.000 0.00 0.00 0.00 5.25
22 23 0.108662 ATCATCGTGAACTCGCTGCA 60.109 50.000 0.00 0.00 0.00 4.41
23 24 0.108662 TCATCGTGAACTCGCTGCAT 60.109 50.000 0.00 0.00 0.00 3.96
24 25 0.299895 CATCGTGAACTCGCTGCATC 59.700 55.000 0.00 0.00 0.00 3.91
25 26 0.174389 ATCGTGAACTCGCTGCATCT 59.826 50.000 0.00 0.00 0.00 2.90
26 27 0.733909 TCGTGAACTCGCTGCATCTG 60.734 55.000 0.00 0.00 0.00 2.90
27 28 1.690283 CGTGAACTCGCTGCATCTGG 61.690 60.000 0.00 0.00 0.00 3.86
28 29 1.742880 TGAACTCGCTGCATCTGGC 60.743 57.895 0.00 0.00 45.13 4.85
29 30 1.449246 GAACTCGCTGCATCTGGCT 60.449 57.895 0.00 0.00 45.15 4.75
30 31 1.703438 GAACTCGCTGCATCTGGCTG 61.703 60.000 0.00 0.00 45.15 4.85
31 32 2.895865 CTCGCTGCATCTGGCTGG 60.896 66.667 0.00 0.00 45.15 4.85
32 33 3.677284 CTCGCTGCATCTGGCTGGT 62.677 63.158 0.00 0.00 45.15 4.00
33 34 2.187685 CGCTGCATCTGGCTGGTA 59.812 61.111 0.00 0.00 45.15 3.25
34 35 1.886313 CGCTGCATCTGGCTGGTAG 60.886 63.158 0.00 0.00 45.15 3.18
35 36 1.525535 GCTGCATCTGGCTGGTAGG 60.526 63.158 0.00 0.00 45.15 3.18
36 37 1.525535 CTGCATCTGGCTGGTAGGC 60.526 63.158 0.00 0.00 45.15 3.93
59 60 2.513159 GCGGCTGCGTATTAATCGA 58.487 52.632 0.00 0.00 0.00 3.59
60 61 1.068474 GCGGCTGCGTATTAATCGAT 58.932 50.000 0.00 0.00 0.00 3.59
61 62 1.059264 GCGGCTGCGTATTAATCGATC 59.941 52.381 0.00 0.00 0.00 3.69
62 63 1.317611 CGGCTGCGTATTAATCGATCG 59.682 52.381 9.36 9.36 0.00 3.69
63 64 1.654105 GGCTGCGTATTAATCGATCGG 59.346 52.381 16.41 0.00 0.00 4.18
64 65 1.654105 GCTGCGTATTAATCGATCGGG 59.346 52.381 16.41 0.00 0.00 5.14
65 66 2.925306 GCTGCGTATTAATCGATCGGGT 60.925 50.000 16.41 5.97 0.00 5.28
66 67 2.915463 CTGCGTATTAATCGATCGGGTC 59.085 50.000 16.41 0.00 0.00 4.46
67 68 2.555325 TGCGTATTAATCGATCGGGTCT 59.445 45.455 16.41 0.00 0.00 3.85
68 69 3.752747 TGCGTATTAATCGATCGGGTCTA 59.247 43.478 16.41 0.00 0.00 2.59
69 70 4.216042 TGCGTATTAATCGATCGGGTCTAA 59.784 41.667 16.41 8.20 0.00 2.10
70 71 5.106038 TGCGTATTAATCGATCGGGTCTAAT 60.106 40.000 16.41 14.11 0.00 1.73
71 72 6.093909 TGCGTATTAATCGATCGGGTCTAATA 59.906 38.462 16.41 13.24 0.00 0.98
72 73 6.413235 GCGTATTAATCGATCGGGTCTAATAC 59.587 42.308 16.41 20.78 32.58 1.89
73 74 7.466805 CGTATTAATCGATCGGGTCTAATACA 58.533 38.462 26.61 8.45 34.27 2.29
74 75 7.964559 CGTATTAATCGATCGGGTCTAATACAA 59.035 37.037 26.61 11.96 34.27 2.41
75 76 9.286946 GTATTAATCGATCGGGTCTAATACAAG 57.713 37.037 24.86 0.00 34.55 3.16
76 77 5.786264 AATCGATCGGGTCTAATACAAGT 57.214 39.130 16.41 0.00 0.00 3.16
77 78 4.563337 TCGATCGGGTCTAATACAAGTG 57.437 45.455 16.41 0.00 0.00 3.16
78 79 3.949754 TCGATCGGGTCTAATACAAGTGT 59.050 43.478 16.41 0.00 0.00 3.55
79 80 4.400251 TCGATCGGGTCTAATACAAGTGTT 59.600 41.667 16.41 0.00 0.00 3.32
80 81 5.105635 TCGATCGGGTCTAATACAAGTGTTT 60.106 40.000 16.41 0.00 0.00 2.83
81 82 6.095300 TCGATCGGGTCTAATACAAGTGTTTA 59.905 38.462 16.41 0.00 0.00 2.01
82 83 6.417044 CGATCGGGTCTAATACAAGTGTTTAG 59.583 42.308 7.38 0.00 0.00 1.85
83 84 5.413499 TCGGGTCTAATACAAGTGTTTAGC 58.587 41.667 0.00 0.00 0.00 3.09
84 85 4.266976 CGGGTCTAATACAAGTGTTTAGCG 59.733 45.833 0.00 0.00 0.00 4.26
85 86 5.173664 GGGTCTAATACAAGTGTTTAGCGT 58.826 41.667 0.00 0.00 0.00 5.07
86 87 5.290400 GGGTCTAATACAAGTGTTTAGCGTC 59.710 44.000 0.00 0.00 0.00 5.19
87 88 5.290400 GGTCTAATACAAGTGTTTAGCGTCC 59.710 44.000 0.00 0.31 0.00 4.79
88 89 5.290400 GTCTAATACAAGTGTTTAGCGTCCC 59.710 44.000 0.00 0.00 0.00 4.46
89 90 3.975168 ATACAAGTGTTTAGCGTCCCT 57.025 42.857 0.00 0.00 0.00 4.20
90 91 1.878953 ACAAGTGTTTAGCGTCCCTG 58.121 50.000 0.00 0.00 0.00 4.45
91 92 0.517316 CAAGTGTTTAGCGTCCCTGC 59.483 55.000 0.00 0.00 0.00 4.85
93 94 0.396811 AGTGTTTAGCGTCCCTGCTT 59.603 50.000 0.00 0.00 44.46 3.91
94 95 0.796927 GTGTTTAGCGTCCCTGCTTC 59.203 55.000 0.00 0.00 44.46 3.86
95 96 0.685097 TGTTTAGCGTCCCTGCTTCT 59.315 50.000 0.00 0.00 44.46 2.85
96 97 1.079503 GTTTAGCGTCCCTGCTTCTG 58.920 55.000 0.00 0.00 44.46 3.02
97 98 0.973632 TTTAGCGTCCCTGCTTCTGA 59.026 50.000 0.00 0.00 44.46 3.27
98 99 0.532573 TTAGCGTCCCTGCTTCTGAG 59.467 55.000 0.00 0.00 44.46 3.35
99 100 0.612174 TAGCGTCCCTGCTTCTGAGT 60.612 55.000 0.00 0.00 44.46 3.41
100 101 1.446966 GCGTCCCTGCTTCTGAGTC 60.447 63.158 0.00 0.00 0.00 3.36
101 102 1.216710 CGTCCCTGCTTCTGAGTCC 59.783 63.158 0.00 0.00 0.00 3.85
102 103 1.599576 GTCCCTGCTTCTGAGTCCC 59.400 63.158 0.00 0.00 0.00 4.46
103 104 1.158466 TCCCTGCTTCTGAGTCCCA 59.842 57.895 0.00 0.00 0.00 4.37
104 105 0.252881 TCCCTGCTTCTGAGTCCCAT 60.253 55.000 0.00 0.00 0.00 4.00
105 106 0.107312 CCCTGCTTCTGAGTCCCATG 60.107 60.000 0.00 0.00 0.00 3.66
106 107 0.107312 CCTGCTTCTGAGTCCCATGG 60.107 60.000 4.14 4.14 0.00 3.66
107 108 0.107312 CTGCTTCTGAGTCCCATGGG 60.107 60.000 26.30 26.30 0.00 4.00
108 109 1.452833 GCTTCTGAGTCCCATGGGC 60.453 63.158 27.41 20.48 34.68 5.36
109 110 1.919600 GCTTCTGAGTCCCATGGGCT 61.920 60.000 27.41 24.84 34.68 5.19
110 111 1.500474 CTTCTGAGTCCCATGGGCTA 58.500 55.000 27.41 7.06 34.68 3.93
111 112 2.053244 CTTCTGAGTCCCATGGGCTAT 58.947 52.381 27.41 13.97 34.68 2.97
112 113 1.427809 TCTGAGTCCCATGGGCTATG 58.572 55.000 27.41 19.29 36.50 2.23
113 114 1.135094 CTGAGTCCCATGGGCTATGT 58.865 55.000 27.41 7.90 34.87 2.29
114 115 0.839277 TGAGTCCCATGGGCTATGTG 59.161 55.000 27.41 0.00 34.87 3.21
115 116 0.536006 GAGTCCCATGGGCTATGTGC 60.536 60.000 27.41 10.02 41.94 4.57
116 117 1.893808 GTCCCATGGGCTATGTGCG 60.894 63.158 27.41 0.00 44.05 5.34
117 118 2.069430 TCCCATGGGCTATGTGCGA 61.069 57.895 27.41 1.79 44.05 5.10
118 119 1.893808 CCCATGGGCTATGTGCGAC 60.894 63.158 20.41 0.00 44.05 5.19
119 120 2.246739 CCATGGGCTATGTGCGACG 61.247 63.158 10.11 0.00 44.05 5.12
120 121 1.521457 CATGGGCTATGTGCGACGT 60.521 57.895 2.19 0.00 44.05 4.34
121 122 1.521457 ATGGGCTATGTGCGACGTG 60.521 57.895 0.00 0.00 44.05 4.49
122 123 2.890474 GGGCTATGTGCGACGTGG 60.890 66.667 0.00 0.00 44.05 4.94
123 124 2.890474 GGCTATGTGCGACGTGGG 60.890 66.667 0.00 0.00 44.05 4.61
124 125 2.890474 GCTATGTGCGACGTGGGG 60.890 66.667 0.00 0.00 0.00 4.96
125 126 2.202878 CTATGTGCGACGTGGGGG 60.203 66.667 0.00 0.00 0.00 5.40
211 212 3.932545 GTAGCCACGATCTGATCTGAT 57.067 47.619 14.33 14.33 0.00 2.90
214 215 2.296752 AGCCACGATCTGATCTGATCTG 59.703 50.000 29.14 24.97 40.32 2.90
215 216 2.295629 GCCACGATCTGATCTGATCTGA 59.704 50.000 29.14 23.67 40.32 3.27
216 217 3.856638 GCCACGATCTGATCTGATCTGAC 60.857 52.174 29.14 19.10 40.32 3.51
217 218 3.305267 CCACGATCTGATCTGATCTGACC 60.305 52.174 29.14 16.49 40.32 4.02
218 219 3.569277 CACGATCTGATCTGATCTGACCT 59.431 47.826 29.14 12.98 40.32 3.85
219 220 4.759183 CACGATCTGATCTGATCTGACCTA 59.241 45.833 29.14 7.52 40.32 3.08
220 221 5.003160 ACGATCTGATCTGATCTGACCTAG 58.997 45.833 29.14 18.84 40.32 3.02
221 222 4.395854 CGATCTGATCTGATCTGACCTAGG 59.604 50.000 29.14 7.41 40.32 3.02
222 223 3.495331 TCTGATCTGATCTGACCTAGGC 58.505 50.000 19.44 2.11 33.13 3.93
223 224 2.228582 CTGATCTGATCTGACCTAGGCG 59.771 54.545 17.82 0.00 0.00 5.52
256 257 2.362077 CCCATTGCCTTGTACAATAGCC 59.638 50.000 21.52 7.74 36.00 3.93
303 304 2.594303 CTGGGCCTTCACGTTGCA 60.594 61.111 4.53 0.00 0.00 4.08
317 318 1.929836 CGTTGCATTACAGAGAGAGGC 59.070 52.381 0.00 0.00 0.00 4.70
318 319 2.284190 GTTGCATTACAGAGAGAGGCC 58.716 52.381 0.00 0.00 0.00 5.19
319 320 1.571955 TGCATTACAGAGAGAGGCCA 58.428 50.000 5.01 0.00 0.00 5.36
320 321 1.908619 TGCATTACAGAGAGAGGCCAA 59.091 47.619 5.01 0.00 0.00 4.52
321 322 2.305635 TGCATTACAGAGAGAGGCCAAA 59.694 45.455 5.01 0.00 0.00 3.28
322 323 3.244875 TGCATTACAGAGAGAGGCCAAAA 60.245 43.478 5.01 0.00 0.00 2.44
323 324 3.950395 GCATTACAGAGAGAGGCCAAAAT 59.050 43.478 5.01 0.00 0.00 1.82
324 325 4.036144 GCATTACAGAGAGAGGCCAAAATC 59.964 45.833 5.01 0.00 0.00 2.17
325 326 4.908601 TTACAGAGAGAGGCCAAAATCA 57.091 40.909 5.01 0.00 0.00 2.57
329 330 2.025510 AGAGAGAGGCCAAAATCAAGGG 60.026 50.000 5.01 0.00 0.00 3.95
344 345 6.426646 AATCAAGGGAAATCTAGTCGCTAT 57.573 37.500 0.00 0.00 37.30 2.97
347 348 7.356089 TCAAGGGAAATCTAGTCGCTATTAA 57.644 36.000 0.00 0.00 37.30 1.40
348 349 7.208080 TCAAGGGAAATCTAGTCGCTATTAAC 58.792 38.462 0.00 0.00 37.30 2.01
351 352 5.927115 GGGAAATCTAGTCGCTATTAACAGG 59.073 44.000 0.00 0.00 0.00 4.00
352 353 6.239232 GGGAAATCTAGTCGCTATTAACAGGA 60.239 42.308 0.00 0.00 0.00 3.86
353 354 7.208080 GGAAATCTAGTCGCTATTAACAGGAA 58.792 38.462 0.00 0.00 0.00 3.36
354 355 7.709613 GGAAATCTAGTCGCTATTAACAGGAAA 59.290 37.037 0.00 0.00 0.00 3.13
356 357 5.575957 TCTAGTCGCTATTAACAGGAAACG 58.424 41.667 0.00 0.00 0.00 3.60
358 359 2.928116 GTCGCTATTAACAGGAAACGCT 59.072 45.455 0.00 0.00 0.00 5.07
359 360 4.107622 GTCGCTATTAACAGGAAACGCTA 58.892 43.478 0.00 0.00 0.00 4.26
360 361 4.743644 GTCGCTATTAACAGGAAACGCTAT 59.256 41.667 0.00 0.00 0.00 2.97
425 525 3.099524 GAGCTATCGATGTGGCTCG 57.900 57.895 23.52 0.00 41.03 5.03
426 526 1.006314 GAGCTATCGATGTGGCTCGC 61.006 60.000 23.52 11.04 41.03 5.03
427 527 1.300156 GCTATCGATGTGGCTCGCA 60.300 57.895 8.54 0.00 38.52 5.10
428 528 1.280886 GCTATCGATGTGGCTCGCAG 61.281 60.000 8.54 0.00 38.52 5.18
429 529 1.280886 CTATCGATGTGGCTCGCAGC 61.281 60.000 8.54 0.11 41.46 5.25
430 530 2.015227 TATCGATGTGGCTCGCAGCA 62.015 55.000 8.54 0.00 44.75 4.41
432 532 3.503363 GATGTGGCTCGCAGCACC 61.503 66.667 9.78 0.00 44.75 5.01
444 544 2.359230 AGCACCGCTGGCTTTCTC 60.359 61.111 0.00 0.00 38.81 2.87
445 545 2.359230 GCACCGCTGGCTTTCTCT 60.359 61.111 0.00 0.00 0.00 3.10
446 546 2.394563 GCACCGCTGGCTTTCTCTC 61.395 63.158 0.00 0.00 0.00 3.20
447 547 1.743252 CACCGCTGGCTTTCTCTCC 60.743 63.158 0.00 0.00 0.00 3.71
448 548 2.217038 ACCGCTGGCTTTCTCTCCA 61.217 57.895 0.00 0.00 0.00 3.86
452 552 3.851051 CTGGCTTTCTCTCCAGTCC 57.149 57.895 0.35 0.00 43.66 3.85
453 553 0.979665 CTGGCTTTCTCTCCAGTCCA 59.020 55.000 0.35 0.00 43.66 4.02
454 554 0.979665 TGGCTTTCTCTCCAGTCCAG 59.020 55.000 0.00 0.00 0.00 3.86
455 555 0.251634 GGCTTTCTCTCCAGTCCAGG 59.748 60.000 0.00 0.00 0.00 4.45
456 556 0.392327 GCTTTCTCTCCAGTCCAGGC 60.392 60.000 0.00 0.00 0.00 4.85
457 557 0.251634 CTTTCTCTCCAGTCCAGGCC 59.748 60.000 0.00 0.00 0.00 5.19
458 558 1.201429 TTTCTCTCCAGTCCAGGCCC 61.201 60.000 0.00 0.00 0.00 5.80
459 559 3.465403 CTCTCCAGTCCAGGCCCG 61.465 72.222 0.00 0.00 0.00 6.13
500 600 4.077745 TCCCCAGATCCCTTTCTATCTCTT 60.078 45.833 0.00 0.00 29.93 2.85
501 601 4.662650 CCCCAGATCCCTTTCTATCTCTTT 59.337 45.833 0.00 0.00 29.93 2.52
502 602 5.221823 CCCCAGATCCCTTTCTATCTCTTTC 60.222 48.000 0.00 0.00 29.93 2.62
503 603 5.606329 CCCAGATCCCTTTCTATCTCTTTCT 59.394 44.000 0.00 0.00 29.93 2.52
504 604 6.239572 CCCAGATCCCTTTCTATCTCTTTCTC 60.240 46.154 0.00 0.00 29.93 2.87
505 605 6.554605 CCAGATCCCTTTCTATCTCTTTCTCT 59.445 42.308 0.00 0.00 29.93 3.10
506 606 7.255942 CCAGATCCCTTTCTATCTCTTTCTCTC 60.256 44.444 0.00 0.00 29.93 3.20
507 607 7.506938 CAGATCCCTTTCTATCTCTTTCTCTCT 59.493 40.741 0.00 0.00 29.93 3.10
508 608 7.725844 AGATCCCTTTCTATCTCTTTCTCTCTC 59.274 40.741 0.00 0.00 0.00 3.20
509 609 6.980577 TCCCTTTCTATCTCTTTCTCTCTCT 58.019 40.000 0.00 0.00 0.00 3.10
514 614 9.177608 CTTTCTATCTCTTTCTCTCTCTCTTCA 57.822 37.037 0.00 0.00 0.00 3.02
525 625 6.742756 TCTCTCTCTCTTCACCCCTTTATTA 58.257 40.000 0.00 0.00 0.00 0.98
526 626 7.366226 TCTCTCTCTCTTCACCCCTTTATTAT 58.634 38.462 0.00 0.00 0.00 1.28
527 627 7.846823 TCTCTCTCTCTTCACCCCTTTATTATT 59.153 37.037 0.00 0.00 0.00 1.40
528 628 9.148879 CTCTCTCTCTTCACCCCTTTATTATTA 57.851 37.037 0.00 0.00 0.00 0.98
596 696 6.042093 TCAATCCCCATTATGAGTGTCTAGAC 59.958 42.308 16.32 16.32 0.00 2.59
597 697 5.144159 TCCCCATTATGAGTGTCTAGACT 57.856 43.478 23.01 4.29 0.00 3.24
598 698 6.275692 TCCCCATTATGAGTGTCTAGACTA 57.724 41.667 23.01 7.59 0.00 2.59
599 699 6.307776 TCCCCATTATGAGTGTCTAGACTAG 58.692 44.000 23.01 2.81 0.00 2.57
661 841 2.505364 AATCTGGCTGCCCTCCCAAC 62.505 60.000 17.53 0.00 0.00 3.77
795 981 7.306213 TGAGTAGAGTTCGATTGTCTTTACTG 58.694 38.462 12.20 0.00 32.11 2.74
875 1093 4.476752 GGGCGTTGGGCGGATACA 62.477 66.667 0.00 0.00 44.92 2.29
892 1110 7.333672 GGCGGATACATAAAGGTAAAAGATAGG 59.666 40.741 0.00 0.00 0.00 2.57
893 1111 8.092687 GCGGATACATAAAGGTAAAAGATAGGA 58.907 37.037 0.00 0.00 0.00 2.94
894 1112 9.640963 CGGATACATAAAGGTAAAAGATAGGAG 57.359 37.037 0.00 0.00 0.00 3.69
953 1171 1.739049 CCAGATCTCTCTCACCGCC 59.261 63.158 0.00 0.00 0.00 6.13
975 1193 1.134670 CCTCCTTCCTCAAGCCTAACG 60.135 57.143 0.00 0.00 0.00 3.18
976 1194 1.825474 CTCCTTCCTCAAGCCTAACGA 59.175 52.381 0.00 0.00 0.00 3.85
1088 1321 3.127533 GCACAGGACACGGCATCC 61.128 66.667 0.00 0.00 36.38 3.51
1151 1396 3.606615 GCAAGTACGTATACTCTCCTCGC 60.607 52.174 0.00 0.00 41.00 5.03
1161 1406 7.443575 ACGTATACTCTCCTCGCTTATTTCTTA 59.556 37.037 0.56 0.00 0.00 2.10
1162 1407 7.958567 CGTATACTCTCCTCGCTTATTTCTTAG 59.041 40.741 0.56 0.00 0.00 2.18
1163 1408 5.523438 ACTCTCCTCGCTTATTTCTTAGG 57.477 43.478 0.00 0.00 0.00 2.69
1164 1409 4.342665 ACTCTCCTCGCTTATTTCTTAGGG 59.657 45.833 0.00 0.00 0.00 3.53
1165 1410 4.287552 TCTCCTCGCTTATTTCTTAGGGT 58.712 43.478 0.00 0.00 0.00 4.34
1166 1411 4.341520 TCTCCTCGCTTATTTCTTAGGGTC 59.658 45.833 0.00 0.00 0.00 4.46
1167 1412 4.287552 TCCTCGCTTATTTCTTAGGGTCT 58.712 43.478 0.00 0.00 0.00 3.85
1168 1413 4.099573 TCCTCGCTTATTTCTTAGGGTCTG 59.900 45.833 0.00 0.00 0.00 3.51
1169 1414 4.141914 CCTCGCTTATTTCTTAGGGTCTGT 60.142 45.833 0.00 0.00 0.00 3.41
1170 1415 5.007385 TCGCTTATTTCTTAGGGTCTGTC 57.993 43.478 0.00 0.00 0.00 3.51
1171 1416 4.710375 TCGCTTATTTCTTAGGGTCTGTCT 59.290 41.667 0.00 0.00 0.00 3.41
1172 1417 4.806247 CGCTTATTTCTTAGGGTCTGTCTG 59.194 45.833 0.00 0.00 0.00 3.51
1173 1418 5.119694 GCTTATTTCTTAGGGTCTGTCTGG 58.880 45.833 0.00 0.00 0.00 3.86
1174 1419 5.104900 GCTTATTTCTTAGGGTCTGTCTGGA 60.105 44.000 0.00 0.00 0.00 3.86
1175 1420 4.828072 ATTTCTTAGGGTCTGTCTGGAC 57.172 45.455 0.00 0.00 35.66 4.02
1176 1421 2.992847 TCTTAGGGTCTGTCTGGACA 57.007 50.000 3.34 3.34 37.91 4.02
1177 1422 2.526432 TCTTAGGGTCTGTCTGGACAC 58.474 52.381 0.00 0.00 39.71 3.67
1178 1423 2.158370 TCTTAGGGTCTGTCTGGACACA 60.158 50.000 0.00 0.00 41.67 3.72
1179 1424 2.623418 TAGGGTCTGTCTGGACACAT 57.377 50.000 0.00 0.00 41.67 3.21
1180 1425 1.270907 AGGGTCTGTCTGGACACATC 58.729 55.000 0.00 0.00 41.67 3.06
1181 1426 1.203237 AGGGTCTGTCTGGACACATCT 60.203 52.381 0.00 0.00 41.67 2.90
1182 1427 2.043115 AGGGTCTGTCTGGACACATCTA 59.957 50.000 0.00 0.00 41.67 1.98
1183 1428 2.428890 GGGTCTGTCTGGACACATCTAG 59.571 54.545 0.00 0.00 39.26 2.43
1184 1429 3.357203 GGTCTGTCTGGACACATCTAGA 58.643 50.000 0.00 0.00 39.95 2.43
1185 1430 3.957497 GGTCTGTCTGGACACATCTAGAT 59.043 47.826 0.00 0.00 43.60 1.98
1186 1431 4.202101 GGTCTGTCTGGACACATCTAGATG 60.202 50.000 27.63 27.63 43.60 2.90
1214 1459 8.011844 ACATAGTTATGTCACATCTAAGCTGA 57.988 34.615 0.00 0.00 42.96 4.26
1215 1460 8.646004 ACATAGTTATGTCACATCTAAGCTGAT 58.354 33.333 0.00 0.00 42.96 2.90
1216 1461 8.923683 CATAGTTATGTCACATCTAAGCTGATG 58.076 37.037 11.48 11.48 46.61 3.07
1224 1469 4.669206 CATCTAAGCTGATGTCCACTCT 57.331 45.455 5.99 0.00 39.05 3.24
1225 1470 4.370049 CATCTAAGCTGATGTCCACTCTG 58.630 47.826 5.99 0.00 39.05 3.35
1226 1471 3.435275 TCTAAGCTGATGTCCACTCTGT 58.565 45.455 0.00 0.00 0.00 3.41
1227 1472 3.834813 TCTAAGCTGATGTCCACTCTGTT 59.165 43.478 0.00 0.00 0.00 3.16
1228 1473 3.498774 AAGCTGATGTCCACTCTGTTT 57.501 42.857 0.00 0.00 0.00 2.83
1229 1474 2.775890 AGCTGATGTCCACTCTGTTTG 58.224 47.619 0.00 0.00 0.00 2.93
1230 1475 2.105477 AGCTGATGTCCACTCTGTTTGT 59.895 45.455 0.00 0.00 0.00 2.83
1231 1476 2.225019 GCTGATGTCCACTCTGTTTGTG 59.775 50.000 0.00 0.00 35.39 3.33
1286 1531 8.645730 TTTGTTGCTGCATTATATATTTGTGG 57.354 30.769 1.84 0.00 0.00 4.17
1287 1532 6.747125 TGTTGCTGCATTATATATTTGTGGG 58.253 36.000 1.84 0.00 0.00 4.61
1288 1533 6.548993 TGTTGCTGCATTATATATTTGTGGGA 59.451 34.615 1.84 0.00 0.00 4.37
1289 1534 6.822667 TGCTGCATTATATATTTGTGGGAG 57.177 37.500 0.00 0.00 0.00 4.30
1290 1535 5.183713 TGCTGCATTATATATTTGTGGGAGC 59.816 40.000 0.00 0.00 0.00 4.70
1291 1536 5.416952 GCTGCATTATATATTTGTGGGAGCT 59.583 40.000 0.00 0.00 0.00 4.09
1292 1537 6.071728 GCTGCATTATATATTTGTGGGAGCTT 60.072 38.462 0.00 0.00 0.00 3.74
1293 1538 7.121168 GCTGCATTATATATTTGTGGGAGCTTA 59.879 37.037 0.00 0.00 0.00 3.09
1294 1539 8.565896 TGCATTATATATTTGTGGGAGCTTAG 57.434 34.615 0.00 0.00 0.00 2.18
1295 1540 8.382405 TGCATTATATATTTGTGGGAGCTTAGA 58.618 33.333 0.00 0.00 0.00 2.10
1296 1541 9.401058 GCATTATATATTTGTGGGAGCTTAGAT 57.599 33.333 0.00 0.00 0.00 1.98
1299 1544 9.725019 TTATATATTTGTGGGAGCTTAGATGTG 57.275 33.333 0.00 0.00 0.00 3.21
1300 1545 4.574674 ATTTGTGGGAGCTTAGATGTGA 57.425 40.909 0.00 0.00 0.00 3.58
1301 1546 3.334583 TTGTGGGAGCTTAGATGTGAC 57.665 47.619 0.00 0.00 0.00 3.67
1302 1547 2.256306 TGTGGGAGCTTAGATGTGACA 58.744 47.619 0.00 0.00 0.00 3.58
1303 1548 2.840038 TGTGGGAGCTTAGATGTGACAT 59.160 45.455 0.00 0.00 0.00 3.06
1304 1549 3.118629 TGTGGGAGCTTAGATGTGACATC 60.119 47.826 17.46 17.46 0.00 3.06
1305 1550 2.435805 TGGGAGCTTAGATGTGACATCC 59.564 50.000 21.05 6.28 0.00 3.51
1306 1551 2.703007 GGGAGCTTAGATGTGACATCCT 59.297 50.000 21.05 11.37 0.00 3.24
1307 1552 3.135530 GGGAGCTTAGATGTGACATCCTT 59.864 47.826 21.05 7.22 0.00 3.36
1308 1553 4.345257 GGGAGCTTAGATGTGACATCCTTA 59.655 45.833 21.05 6.22 0.00 2.69
1309 1554 5.163301 GGGAGCTTAGATGTGACATCCTTAA 60.163 44.000 21.05 13.11 0.00 1.85
1310 1555 6.349300 GGAGCTTAGATGTGACATCCTTAAA 58.651 40.000 21.05 10.18 0.00 1.52
1311 1556 6.823689 GGAGCTTAGATGTGACATCCTTAAAA 59.176 38.462 21.05 8.00 0.00 1.52
1312 1557 7.336931 GGAGCTTAGATGTGACATCCTTAAAAA 59.663 37.037 21.05 6.46 0.00 1.94
1340 1585 7.845483 CATCTAGATGTGAATTAGACAAACCG 58.155 38.462 22.42 0.00 34.23 4.44
1341 1586 6.931838 TCTAGATGTGAATTAGACAAACCGT 58.068 36.000 0.00 0.00 0.00 4.83
1342 1587 8.058667 TCTAGATGTGAATTAGACAAACCGTA 57.941 34.615 0.00 0.00 0.00 4.02
1343 1588 8.692710 TCTAGATGTGAATTAGACAAACCGTAT 58.307 33.333 0.00 0.00 0.00 3.06
1344 1589 9.314321 CTAGATGTGAATTAGACAAACCGTATT 57.686 33.333 0.00 0.00 0.00 1.89
1345 1590 8.561738 AGATGTGAATTAGACAAACCGTATTT 57.438 30.769 0.00 0.00 0.00 1.40
1346 1591 8.665685 AGATGTGAATTAGACAAACCGTATTTC 58.334 33.333 0.00 0.00 0.00 2.17
1347 1592 7.972832 TGTGAATTAGACAAACCGTATTTCT 57.027 32.000 0.00 0.00 0.00 2.52
1348 1593 8.385898 TGTGAATTAGACAAACCGTATTTCTT 57.614 30.769 0.00 0.00 0.00 2.52
1349 1594 9.491675 TGTGAATTAGACAAACCGTATTTCTTA 57.508 29.630 0.00 0.00 0.00 2.10
1350 1595 9.750882 GTGAATTAGACAAACCGTATTTCTTAC 57.249 33.333 0.00 0.00 0.00 2.34
1530 1780 3.192466 CCGGACCGACTATTTTACCTTG 58.808 50.000 17.49 0.00 0.00 3.61
1547 1797 2.333014 CTTGTCTTCTCCGAGTTGCTC 58.667 52.381 0.00 0.00 0.00 4.26
1566 1816 6.647212 TGCTCGAGTAAAATTGTGACATAG 57.353 37.500 15.13 0.00 0.00 2.23
1685 1938 7.864379 AGTTGCTGAGAATATGAAACAACAAAG 59.136 33.333 0.00 0.00 38.82 2.77
1829 2085 7.270579 GCATACAACTTTGACGATAGGAAAAAC 59.729 37.037 0.00 0.00 43.77 2.43
2069 2333 1.131883 GCCTGTGTGTCTCATGCATTC 59.868 52.381 0.00 0.00 0.00 2.67
2101 2365 4.774124 TGGAGATGCTATTCCAAACTCAG 58.226 43.478 0.00 0.00 40.41 3.35
2537 2808 9.468532 GAGCACTTGTTTTCAAAATCTTCTATT 57.531 29.630 0.00 0.00 39.47 1.73
2609 2881 2.283298 CCTTGTACGATGCAGCATCTT 58.717 47.619 28.80 23.43 38.59 2.40
2614 2886 4.363138 TGTACGATGCAGCATCTTAAGAG 58.637 43.478 28.80 16.63 38.59 2.85
2616 2888 4.333913 ACGATGCAGCATCTTAAGAGAT 57.666 40.909 28.80 5.42 43.43 2.75
2619 2891 5.236047 ACGATGCAGCATCTTAAGAGATTTC 59.764 40.000 28.80 3.98 40.67 2.17
2629 2901 7.427606 GCATCTTAAGAGATTTCATGTTCAACG 59.572 37.037 11.53 0.00 40.67 4.10
2808 3104 2.301870 ACTAGTCTTCCGTCCATTGCAA 59.698 45.455 0.00 0.00 0.00 4.08
3035 3351 7.445402 CCTCAAGAACTTGGAAATTAGACTCAA 59.555 37.037 13.46 0.00 40.78 3.02
3234 3574 5.817296 TGCAGGTAAATGAGTATGTCATGAC 59.183 40.000 19.27 19.27 45.89 3.06
3880 6130 5.981315 GTGCTAAACGATGGTATTGCTAGTA 59.019 40.000 0.00 0.00 0.00 1.82
3940 7715 3.821033 CCCAGACCATTCGACTTTCTTTT 59.179 43.478 0.00 0.00 0.00 2.27
3941 7716 4.320494 CCCAGACCATTCGACTTTCTTTTG 60.320 45.833 0.00 0.00 0.00 2.44
3942 7717 4.275936 CCAGACCATTCGACTTTCTTTTGT 59.724 41.667 0.00 0.00 0.00 2.83
3943 7718 5.221048 CCAGACCATTCGACTTTCTTTTGTT 60.221 40.000 0.00 0.00 0.00 2.83
3944 7719 5.909610 CAGACCATTCGACTTTCTTTTGTTC 59.090 40.000 0.00 0.00 0.00 3.18
3945 7720 4.844267 ACCATTCGACTTTCTTTTGTTCG 58.156 39.130 0.00 0.00 0.00 3.95
3946 7721 4.219033 CCATTCGACTTTCTTTTGTTCGG 58.781 43.478 0.00 0.00 0.00 4.30
3947 7722 4.261031 CCATTCGACTTTCTTTTGTTCGGT 60.261 41.667 0.00 0.00 0.00 4.69
3948 7723 4.950434 TTCGACTTTCTTTTGTTCGGTT 57.050 36.364 0.00 0.00 0.00 4.44
3949 7724 4.525411 TCGACTTTCTTTTGTTCGGTTC 57.475 40.909 0.00 0.00 0.00 3.62
3950 7725 4.186159 TCGACTTTCTTTTGTTCGGTTCT 58.814 39.130 0.00 0.00 0.00 3.01
3951 7726 4.632688 TCGACTTTCTTTTGTTCGGTTCTT 59.367 37.500 0.00 0.00 0.00 2.52
3952 7727 4.728608 CGACTTTCTTTTGTTCGGTTCTTG 59.271 41.667 0.00 0.00 0.00 3.02
3953 7728 4.421058 ACTTTCTTTTGTTCGGTTCTTGC 58.579 39.130 0.00 0.00 0.00 4.01
3977 7752 2.014857 GCACATGCAGATGTCAGTGAT 58.985 47.619 0.00 0.00 41.12 3.06
3978 7753 2.223272 GCACATGCAGATGTCAGTGATG 60.223 50.000 0.00 0.00 41.12 3.07
3979 7754 3.267483 CACATGCAGATGTCAGTGATGA 58.733 45.455 0.00 0.00 41.12 2.92
3980 7755 3.687698 CACATGCAGATGTCAGTGATGAA 59.312 43.478 0.00 0.00 41.12 2.57
3982 7757 3.690475 TGCAGATGTCAGTGATGAACT 57.310 42.857 0.00 0.00 40.93 3.01
3983 7758 4.011966 TGCAGATGTCAGTGATGAACTT 57.988 40.909 0.00 0.00 36.83 2.66
3984 7759 5.151297 TGCAGATGTCAGTGATGAACTTA 57.849 39.130 0.00 0.00 36.83 2.24
3985 7760 5.737860 TGCAGATGTCAGTGATGAACTTAT 58.262 37.500 0.00 0.00 36.83 1.73
3986 7761 6.175471 TGCAGATGTCAGTGATGAACTTATT 58.825 36.000 0.00 0.00 36.83 1.40
3987 7762 6.656270 TGCAGATGTCAGTGATGAACTTATTT 59.344 34.615 0.00 0.00 36.83 1.40
3988 7763 7.175467 TGCAGATGTCAGTGATGAACTTATTTT 59.825 33.333 0.00 0.00 36.83 1.82
3989 7764 8.025445 GCAGATGTCAGTGATGAACTTATTTTT 58.975 33.333 0.00 0.00 36.83 1.94
4018 7793 8.596271 TTGCCATGCATATCATAAAAGAATTG 57.404 30.769 0.00 0.00 38.76 2.32
4019 7794 7.953752 TGCCATGCATATCATAAAAGAATTGA 58.046 30.769 0.00 0.00 31.71 2.57
4020 7795 8.422566 TGCCATGCATATCATAAAAGAATTGAA 58.577 29.630 0.00 0.00 31.71 2.69
4021 7796 9.263538 GCCATGCATATCATAAAAGAATTGAAA 57.736 29.630 0.00 0.00 33.19 2.69
4038 7813 9.690913 AGAATTGAAATCAATCAGATGGTTAGA 57.309 29.630 8.96 0.00 45.06 2.10
4041 7816 7.325660 TGAAATCAATCAGATGGTTAGAAGC 57.674 36.000 0.00 0.00 36.96 3.86
4042 7817 6.885918 TGAAATCAATCAGATGGTTAGAAGCA 59.114 34.615 0.00 0.00 41.10 3.91
4043 7818 6.939132 AATCAATCAGATGGTTAGAAGCAG 57.061 37.500 0.29 0.00 40.07 4.24
4044 7819 5.682234 TCAATCAGATGGTTAGAAGCAGA 57.318 39.130 0.29 0.00 40.07 4.26
4045 7820 6.053632 TCAATCAGATGGTTAGAAGCAGAA 57.946 37.500 0.29 0.00 40.07 3.02
4046 7821 6.475504 TCAATCAGATGGTTAGAAGCAGAAA 58.524 36.000 0.29 0.00 40.07 2.52
4047 7822 6.596888 TCAATCAGATGGTTAGAAGCAGAAAG 59.403 38.462 0.29 0.00 40.07 2.62
4048 7823 5.745312 TCAGATGGTTAGAAGCAGAAAGA 57.255 39.130 0.29 0.00 40.07 2.52
4049 7824 6.114187 TCAGATGGTTAGAAGCAGAAAGAA 57.886 37.500 0.29 0.00 40.07 2.52
4050 7825 6.533730 TCAGATGGTTAGAAGCAGAAAGAAA 58.466 36.000 0.29 0.00 40.07 2.52
4051 7826 6.652481 TCAGATGGTTAGAAGCAGAAAGAAAG 59.348 38.462 0.29 0.00 40.07 2.62
4052 7827 5.414144 AGATGGTTAGAAGCAGAAAGAAAGC 59.586 40.000 0.29 0.00 40.07 3.51
4053 7828 4.460263 TGGTTAGAAGCAGAAAGAAAGCA 58.540 39.130 0.00 0.00 31.91 3.91
4054 7829 4.516698 TGGTTAGAAGCAGAAAGAAAGCAG 59.483 41.667 0.00 0.00 31.91 4.24
4055 7830 4.757149 GGTTAGAAGCAGAAAGAAAGCAGA 59.243 41.667 0.00 0.00 0.00 4.26
4056 7831 5.106752 GGTTAGAAGCAGAAAGAAAGCAGAG 60.107 44.000 0.00 0.00 0.00 3.35
4057 7832 4.348863 AGAAGCAGAAAGAAAGCAGAGA 57.651 40.909 0.00 0.00 0.00 3.10
4058 7833 4.064388 AGAAGCAGAAAGAAAGCAGAGAC 58.936 43.478 0.00 0.00 0.00 3.36
4059 7834 3.482156 AGCAGAAAGAAAGCAGAGACA 57.518 42.857 0.00 0.00 0.00 3.41
4060 7835 4.018484 AGCAGAAAGAAAGCAGAGACAT 57.982 40.909 0.00 0.00 0.00 3.06
4061 7836 3.752222 AGCAGAAAGAAAGCAGAGACATG 59.248 43.478 0.00 0.00 0.00 3.21
4062 7837 3.501445 GCAGAAAGAAAGCAGAGACATGT 59.499 43.478 0.00 0.00 0.00 3.21
4063 7838 4.378253 GCAGAAAGAAAGCAGAGACATGTC 60.378 45.833 18.47 18.47 0.00 3.06
4064 7839 3.993081 AGAAAGAAAGCAGAGACATGTCG 59.007 43.478 19.85 7.49 34.09 4.35
4065 7840 3.667497 AAGAAAGCAGAGACATGTCGA 57.333 42.857 19.85 0.00 34.09 4.20
4066 7841 3.229276 AGAAAGCAGAGACATGTCGAG 57.771 47.619 19.85 14.22 34.09 4.04
4067 7842 2.094286 AGAAAGCAGAGACATGTCGAGG 60.094 50.000 19.85 13.58 34.09 4.63
4068 7843 1.550327 AAGCAGAGACATGTCGAGGA 58.450 50.000 19.85 0.00 34.09 3.71
4069 7844 1.550327 AGCAGAGACATGTCGAGGAA 58.450 50.000 19.85 0.00 34.09 3.36
4070 7845 1.895798 AGCAGAGACATGTCGAGGAAA 59.104 47.619 19.85 0.00 34.09 3.13
4071 7846 2.300152 AGCAGAGACATGTCGAGGAAAA 59.700 45.455 19.85 0.00 34.09 2.29
4072 7847 3.067106 GCAGAGACATGTCGAGGAAAAA 58.933 45.455 19.85 0.00 34.09 1.94
4073 7848 3.686726 GCAGAGACATGTCGAGGAAAAAT 59.313 43.478 19.85 0.00 34.09 1.82
4074 7849 4.436584 GCAGAGACATGTCGAGGAAAAATG 60.437 45.833 19.85 10.04 34.09 2.32
4075 7850 3.686726 AGAGACATGTCGAGGAAAAATGC 59.313 43.478 19.85 0.00 34.09 3.56
4076 7851 3.411446 AGACATGTCGAGGAAAAATGCA 58.589 40.909 19.85 0.00 34.09 3.96
4077 7852 3.189287 AGACATGTCGAGGAAAAATGCAC 59.811 43.478 19.85 0.00 34.09 4.57
4078 7853 2.884012 ACATGTCGAGGAAAAATGCACA 59.116 40.909 0.00 0.00 0.00 4.57
4079 7854 3.507233 ACATGTCGAGGAAAAATGCACAT 59.493 39.130 0.00 0.00 0.00 3.21
4080 7855 3.557577 TGTCGAGGAAAAATGCACATG 57.442 42.857 0.00 0.00 0.00 3.21
4081 7856 3.145286 TGTCGAGGAAAAATGCACATGA 58.855 40.909 0.00 0.00 0.00 3.07
4082 7857 3.567585 TGTCGAGGAAAAATGCACATGAA 59.432 39.130 0.00 0.00 0.00 2.57
4083 7858 3.914364 GTCGAGGAAAAATGCACATGAAC 59.086 43.478 0.00 0.00 0.00 3.18
4084 7859 3.567585 TCGAGGAAAAATGCACATGAACA 59.432 39.130 0.00 0.00 0.00 3.18
4085 7860 3.670055 CGAGGAAAAATGCACATGAACAC 59.330 43.478 0.00 0.00 0.00 3.32
4086 7861 4.619973 GAGGAAAAATGCACATGAACACA 58.380 39.130 0.00 0.00 0.00 3.72
4087 7862 5.021033 AGGAAAAATGCACATGAACACAA 57.979 34.783 0.00 0.00 0.00 3.33
4088 7863 5.613329 AGGAAAAATGCACATGAACACAAT 58.387 33.333 0.00 0.00 0.00 2.71
4089 7864 6.757237 AGGAAAAATGCACATGAACACAATA 58.243 32.000 0.00 0.00 0.00 1.90
4090 7865 6.869913 AGGAAAAATGCACATGAACACAATAG 59.130 34.615 0.00 0.00 0.00 1.73
4091 7866 6.867816 GGAAAAATGCACATGAACACAATAGA 59.132 34.615 0.00 0.00 0.00 1.98
4092 7867 7.148755 GGAAAAATGCACATGAACACAATAGAC 60.149 37.037 0.00 0.00 0.00 2.59
4093 7868 5.963176 AATGCACATGAACACAATAGACA 57.037 34.783 0.00 0.00 0.00 3.41
4094 7869 5.556355 ATGCACATGAACACAATAGACAG 57.444 39.130 0.00 0.00 0.00 3.51
4095 7870 3.189080 TGCACATGAACACAATAGACAGC 59.811 43.478 0.00 0.00 0.00 4.40
4096 7871 3.189080 GCACATGAACACAATAGACAGCA 59.811 43.478 0.00 0.00 0.00 4.41
4097 7872 4.670992 GCACATGAACACAATAGACAGCAG 60.671 45.833 0.00 0.00 0.00 4.24
4098 7873 4.692155 CACATGAACACAATAGACAGCAGA 59.308 41.667 0.00 0.00 0.00 4.26
4099 7874 5.353400 CACATGAACACAATAGACAGCAGAT 59.647 40.000 0.00 0.00 0.00 2.90
4100 7875 5.583854 ACATGAACACAATAGACAGCAGATC 59.416 40.000 0.00 0.00 0.00 2.75
4101 7876 5.151297 TGAACACAATAGACAGCAGATCA 57.849 39.130 0.00 0.00 0.00 2.92
4102 7877 5.173664 TGAACACAATAGACAGCAGATCAG 58.826 41.667 0.00 0.00 0.00 2.90
4103 7878 4.134379 ACACAATAGACAGCAGATCAGG 57.866 45.455 0.00 0.00 0.00 3.86
4104 7879 2.871022 CACAATAGACAGCAGATCAGGC 59.129 50.000 0.00 0.00 0.00 4.85
4105 7880 2.133553 CAATAGACAGCAGATCAGGCG 58.866 52.381 0.00 0.00 36.08 5.52
4106 7881 0.033228 ATAGACAGCAGATCAGGCGC 59.967 55.000 0.00 0.00 36.08 6.53
4107 7882 2.021068 TAGACAGCAGATCAGGCGCC 62.021 60.000 21.89 21.89 36.08 6.53
4108 7883 4.827087 ACAGCAGATCAGGCGCCG 62.827 66.667 23.20 16.49 36.08 6.46
4119 7894 2.746277 GGCGCCGCCTAATATGGG 60.746 66.667 23.30 0.00 46.69 4.00
4120 7895 2.345991 GCGCCGCCTAATATGGGA 59.654 61.111 0.00 0.00 0.00 4.37
4121 7896 1.302192 GCGCCGCCTAATATGGGAA 60.302 57.895 0.00 0.00 0.00 3.97
4145 7920 4.709397 TCCTTTTTCAGTTGCCTTCTTCAA 59.291 37.500 0.00 0.00 0.00 2.69
4146 7921 5.363580 TCCTTTTTCAGTTGCCTTCTTCAAT 59.636 36.000 0.00 0.00 0.00 2.57
4162 7937 6.484364 TCTTCAATCTGGATAGCACATGTA 57.516 37.500 0.00 0.00 0.00 2.29
4182 7957 7.436376 ACATGTACATACAAGTCTTGATGATCG 59.564 37.037 19.53 9.72 39.99 3.69
4244 8020 1.349627 CATGCGCTTCATCACCGTC 59.650 57.895 9.73 0.00 31.79 4.79
4247 8023 3.554692 CGCTTCATCACCGTCGCC 61.555 66.667 0.00 0.00 0.00 5.54
4323 8099 6.025749 ACGAGAGAACATTTATCAGACACA 57.974 37.500 0.00 0.00 0.00 3.72
4398 8174 5.431420 TCGTTTGCTTTATGCTTCAAAGA 57.569 34.783 8.75 0.00 43.37 2.52
4513 8289 4.918201 CCCTTCCTCGGATGCGCC 62.918 72.222 4.18 0.00 0.00 6.53
4541 8317 2.784984 CCCTCCTACCCACCCTGA 59.215 66.667 0.00 0.00 0.00 3.86
4557 8333 2.811317 GACCTCGGAGCTGCGTTG 60.811 66.667 27.20 20.34 0.00 4.10
4558 8334 4.379243 ACCTCGGAGCTGCGTTGG 62.379 66.667 28.64 28.64 0.00 3.77
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.879002 AGCGAGTTCACGATGATGAT 57.121 45.000 0.00 0.00 35.09 2.45
6 7 0.174389 AGATGCAGCGAGTTCACGAT 59.826 50.000 0.00 0.00 35.09 3.73
7 8 0.733909 CAGATGCAGCGAGTTCACGA 60.734 55.000 0.00 0.00 35.09 4.35
8 9 1.690283 CCAGATGCAGCGAGTTCACG 61.690 60.000 0.00 0.00 0.00 4.35
9 10 1.975363 GCCAGATGCAGCGAGTTCAC 61.975 60.000 0.00 0.00 40.77 3.18
10 11 1.742880 GCCAGATGCAGCGAGTTCA 60.743 57.895 0.00 0.00 40.77 3.18
11 12 1.449246 AGCCAGATGCAGCGAGTTC 60.449 57.895 0.00 0.00 44.83 3.01
12 13 1.744368 CAGCCAGATGCAGCGAGTT 60.744 57.895 0.00 0.00 44.83 3.01
13 14 2.125229 CAGCCAGATGCAGCGAGT 60.125 61.111 0.00 0.00 44.83 4.18
14 15 2.302199 TACCAGCCAGATGCAGCGAG 62.302 60.000 0.00 0.00 44.83 5.03
15 16 2.302199 CTACCAGCCAGATGCAGCGA 62.302 60.000 0.00 0.00 44.83 4.93
16 17 1.886313 CTACCAGCCAGATGCAGCG 60.886 63.158 0.00 0.00 44.83 5.18
17 18 1.525535 CCTACCAGCCAGATGCAGC 60.526 63.158 0.00 0.00 44.83 5.25
18 19 1.525535 GCCTACCAGCCAGATGCAG 60.526 63.158 0.00 0.00 44.83 4.41
19 20 2.591753 GCCTACCAGCCAGATGCA 59.408 61.111 0.00 0.00 44.83 3.96
38 39 1.397190 CGATTAATACGCAGCCGCAAG 60.397 52.381 0.00 0.00 38.40 4.01
39 40 0.579630 CGATTAATACGCAGCCGCAA 59.420 50.000 0.00 0.00 38.40 4.85
40 41 0.249114 TCGATTAATACGCAGCCGCA 60.249 50.000 0.00 0.00 38.40 5.69
41 42 1.059264 GATCGATTAATACGCAGCCGC 59.941 52.381 0.00 0.00 38.22 6.53
42 43 1.317611 CGATCGATTAATACGCAGCCG 59.682 52.381 10.26 0.00 41.14 5.52
43 44 1.654105 CCGATCGATTAATACGCAGCC 59.346 52.381 18.66 0.00 0.00 4.85
44 45 1.654105 CCCGATCGATTAATACGCAGC 59.346 52.381 18.66 0.00 0.00 5.25
45 46 2.915463 GACCCGATCGATTAATACGCAG 59.085 50.000 18.66 0.00 0.00 5.18
46 47 2.555325 AGACCCGATCGATTAATACGCA 59.445 45.455 18.66 0.00 0.00 5.24
47 48 3.213249 AGACCCGATCGATTAATACGC 57.787 47.619 18.66 0.00 0.00 4.42
48 49 7.466805 TGTATTAGACCCGATCGATTAATACG 58.533 38.462 18.66 11.60 37.04 3.06
49 50 9.286946 CTTGTATTAGACCCGATCGATTAATAC 57.713 37.037 18.66 22.88 35.82 1.89
50 51 9.017509 ACTTGTATTAGACCCGATCGATTAATA 57.982 33.333 18.66 14.43 0.00 0.98
51 52 7.813148 CACTTGTATTAGACCCGATCGATTAAT 59.187 37.037 18.66 15.32 0.00 1.40
52 53 7.143340 CACTTGTATTAGACCCGATCGATTAA 58.857 38.462 18.66 9.50 0.00 1.40
53 54 6.263842 ACACTTGTATTAGACCCGATCGATTA 59.736 38.462 18.66 0.19 0.00 1.75
54 55 5.068723 ACACTTGTATTAGACCCGATCGATT 59.931 40.000 18.66 1.74 0.00 3.34
55 56 4.583489 ACACTTGTATTAGACCCGATCGAT 59.417 41.667 18.66 0.00 0.00 3.59
56 57 3.949754 ACACTTGTATTAGACCCGATCGA 59.050 43.478 18.66 0.00 0.00 3.59
57 58 4.303086 ACACTTGTATTAGACCCGATCG 57.697 45.455 8.51 8.51 0.00 3.69
58 59 6.200475 GCTAAACACTTGTATTAGACCCGATC 59.800 42.308 11.98 0.00 0.00 3.69
59 60 6.047231 GCTAAACACTTGTATTAGACCCGAT 58.953 40.000 11.98 0.00 0.00 4.18
60 61 5.413499 GCTAAACACTTGTATTAGACCCGA 58.587 41.667 11.98 0.00 0.00 5.14
61 62 4.266976 CGCTAAACACTTGTATTAGACCCG 59.733 45.833 11.98 5.95 0.00 5.28
62 63 5.173664 ACGCTAAACACTTGTATTAGACCC 58.826 41.667 11.98 0.00 0.00 4.46
63 64 5.290400 GGACGCTAAACACTTGTATTAGACC 59.710 44.000 11.98 9.06 0.00 3.85
64 65 5.290400 GGGACGCTAAACACTTGTATTAGAC 59.710 44.000 11.98 6.04 0.00 2.59
65 66 5.186409 AGGGACGCTAAACACTTGTATTAGA 59.814 40.000 11.98 0.00 0.00 2.10
66 67 5.291128 CAGGGACGCTAAACACTTGTATTAG 59.709 44.000 0.00 6.82 0.00 1.73
67 68 5.172934 CAGGGACGCTAAACACTTGTATTA 58.827 41.667 0.00 0.00 0.00 0.98
68 69 4.000988 CAGGGACGCTAAACACTTGTATT 58.999 43.478 0.00 0.00 0.00 1.89
69 70 3.596214 CAGGGACGCTAAACACTTGTAT 58.404 45.455 0.00 0.00 0.00 2.29
70 71 2.868839 GCAGGGACGCTAAACACTTGTA 60.869 50.000 0.00 0.00 0.00 2.41
71 72 1.878953 CAGGGACGCTAAACACTTGT 58.121 50.000 0.00 0.00 0.00 3.16
72 73 0.517316 GCAGGGACGCTAAACACTTG 59.483 55.000 0.00 0.00 0.00 3.16
73 74 0.396811 AGCAGGGACGCTAAACACTT 59.603 50.000 0.00 0.00 41.55 3.16
74 75 0.396811 AAGCAGGGACGCTAAACACT 59.603 50.000 0.00 0.00 42.89 3.55
75 76 0.796927 GAAGCAGGGACGCTAAACAC 59.203 55.000 0.00 0.00 42.89 3.32
76 77 0.685097 AGAAGCAGGGACGCTAAACA 59.315 50.000 0.00 0.00 42.89 2.83
77 78 1.079503 CAGAAGCAGGGACGCTAAAC 58.920 55.000 0.00 0.00 42.89 2.01
78 79 0.973632 TCAGAAGCAGGGACGCTAAA 59.026 50.000 0.00 0.00 42.89 1.85
79 80 0.532573 CTCAGAAGCAGGGACGCTAA 59.467 55.000 0.00 0.00 42.89 3.09
80 81 0.612174 ACTCAGAAGCAGGGACGCTA 60.612 55.000 0.00 0.00 42.89 4.26
81 82 1.882989 GACTCAGAAGCAGGGACGCT 61.883 60.000 0.00 0.00 46.67 5.07
82 83 1.446966 GACTCAGAAGCAGGGACGC 60.447 63.158 0.00 0.00 0.00 5.19
83 84 1.216710 GGACTCAGAAGCAGGGACG 59.783 63.158 0.00 0.00 0.00 4.79
84 85 1.194781 TGGGACTCAGAAGCAGGGAC 61.195 60.000 0.00 0.00 0.00 4.46
85 86 0.252881 ATGGGACTCAGAAGCAGGGA 60.253 55.000 0.00 0.00 0.00 4.20
86 87 0.107312 CATGGGACTCAGAAGCAGGG 60.107 60.000 0.00 0.00 0.00 4.45
87 88 0.107312 CCATGGGACTCAGAAGCAGG 60.107 60.000 2.85 0.00 0.00 4.85
88 89 0.107312 CCCATGGGACTCAGAAGCAG 60.107 60.000 28.27 0.00 37.50 4.24
89 90 1.993653 CCCATGGGACTCAGAAGCA 59.006 57.895 28.27 0.00 37.50 3.91
90 91 1.452833 GCCCATGGGACTCAGAAGC 60.453 63.158 36.00 11.69 37.50 3.86
91 92 1.500474 TAGCCCATGGGACTCAGAAG 58.500 55.000 36.00 4.56 37.50 2.85
92 93 1.770658 CATAGCCCATGGGACTCAGAA 59.229 52.381 36.00 15.27 37.50 3.02
93 94 1.344393 ACATAGCCCATGGGACTCAGA 60.344 52.381 36.00 15.62 39.13 3.27
94 95 1.135094 ACATAGCCCATGGGACTCAG 58.865 55.000 36.00 24.18 39.13 3.35
95 96 0.839277 CACATAGCCCATGGGACTCA 59.161 55.000 36.00 15.43 40.91 3.41
96 97 0.536006 GCACATAGCCCATGGGACTC 60.536 60.000 36.00 17.12 40.91 3.36
97 98 1.533711 GCACATAGCCCATGGGACT 59.466 57.895 36.00 29.46 40.91 3.85
98 99 1.893808 CGCACATAGCCCATGGGAC 60.894 63.158 36.00 24.39 40.91 4.46
99 100 2.069430 TCGCACATAGCCCATGGGA 61.069 57.895 36.00 15.66 40.91 4.37
100 101 1.893808 GTCGCACATAGCCCATGGG 60.894 63.158 27.87 27.87 41.41 4.00
101 102 2.246739 CGTCGCACATAGCCCATGG 61.247 63.158 4.14 4.14 41.38 3.66
102 103 1.521457 ACGTCGCACATAGCCCATG 60.521 57.895 0.00 0.00 41.38 3.66
103 104 1.521457 CACGTCGCACATAGCCCAT 60.521 57.895 0.00 0.00 41.38 4.00
104 105 2.125713 CACGTCGCACATAGCCCA 60.126 61.111 0.00 0.00 41.38 5.36
105 106 2.890474 CCACGTCGCACATAGCCC 60.890 66.667 0.00 0.00 41.38 5.19
106 107 2.890474 CCCACGTCGCACATAGCC 60.890 66.667 0.00 0.00 41.38 3.93
107 108 2.890474 CCCCACGTCGCACATAGC 60.890 66.667 0.00 0.00 40.87 2.97
108 109 2.202878 CCCCCACGTCGCACATAG 60.203 66.667 0.00 0.00 0.00 2.23
173 174 3.615709 GTTGGTTGGTGGCAGGGC 61.616 66.667 0.00 0.00 0.00 5.19
174 175 2.684192 TACGTTGGTTGGTGGCAGGG 62.684 60.000 0.00 0.00 0.00 4.45
175 176 1.228003 TACGTTGGTTGGTGGCAGG 60.228 57.895 0.00 0.00 0.00 4.85
176 177 1.852067 GCTACGTTGGTTGGTGGCAG 61.852 60.000 0.00 0.00 40.00 4.85
177 178 1.894756 GCTACGTTGGTTGGTGGCA 60.895 57.895 0.00 0.00 40.00 4.92
178 179 2.622962 GGCTACGTTGGTTGGTGGC 61.623 63.158 0.00 0.00 39.58 5.01
179 180 1.228003 TGGCTACGTTGGTTGGTGG 60.228 57.895 0.00 0.00 0.00 4.61
180 181 1.837538 CGTGGCTACGTTGGTTGGTG 61.838 60.000 15.18 0.00 44.99 4.17
181 182 1.595929 CGTGGCTACGTTGGTTGGT 60.596 57.895 15.18 0.00 44.99 3.67
182 183 3.249999 CGTGGCTACGTTGGTTGG 58.750 61.111 15.18 0.00 44.99 3.77
211 212 2.675423 ACGCACGCCTAGGTCAGA 60.675 61.111 11.31 0.00 0.00 3.27
217 218 3.838795 GAACGCACGCACGCCTAG 61.839 66.667 0.00 0.00 36.19 3.02
266 267 2.563179 AGCCCATCCATATACGTCAGAC 59.437 50.000 0.00 0.00 0.00 3.51
268 269 2.354103 CCAGCCCATCCATATACGTCAG 60.354 54.545 0.00 0.00 0.00 3.51
303 304 5.441718 TGATTTTGGCCTCTCTCTGTAAT 57.558 39.130 3.32 0.00 0.00 1.89
317 318 5.449177 GCGACTAGATTTCCCTTGATTTTGG 60.449 44.000 0.00 0.00 0.00 3.28
318 319 5.355350 AGCGACTAGATTTCCCTTGATTTTG 59.645 40.000 0.00 0.00 0.00 2.44
319 320 5.501156 AGCGACTAGATTTCCCTTGATTTT 58.499 37.500 0.00 0.00 0.00 1.82
320 321 5.104259 AGCGACTAGATTTCCCTTGATTT 57.896 39.130 0.00 0.00 0.00 2.17
321 322 4.762289 AGCGACTAGATTTCCCTTGATT 57.238 40.909 0.00 0.00 0.00 2.57
322 323 6.426646 AATAGCGACTAGATTTCCCTTGAT 57.573 37.500 0.00 0.00 0.00 2.57
323 324 5.871396 AATAGCGACTAGATTTCCCTTGA 57.129 39.130 0.00 0.00 0.00 3.02
324 325 6.984474 TGTTAATAGCGACTAGATTTCCCTTG 59.016 38.462 0.00 0.00 0.00 3.61
325 326 7.120923 TGTTAATAGCGACTAGATTTCCCTT 57.879 36.000 0.00 0.00 0.00 3.95
329 330 8.541312 GTTTCCTGTTAATAGCGACTAGATTTC 58.459 37.037 0.00 0.00 0.00 2.17
390 391 2.658593 CCGCCCTTGACGATAGCG 60.659 66.667 0.00 0.00 46.04 4.26
391 392 1.300233 CTCCGCCCTTGACGATAGC 60.300 63.158 0.00 0.00 42.67 2.97
392 393 1.300233 GCTCCGCCCTTGACGATAG 60.300 63.158 0.00 0.00 46.19 2.08
427 527 2.359230 GAGAAAGCCAGCGGTGCT 60.359 61.111 9.63 7.42 41.89 4.40
428 528 2.359230 AGAGAAAGCCAGCGGTGC 60.359 61.111 9.63 4.96 0.00 5.01
429 529 1.743252 GGAGAGAAAGCCAGCGGTG 60.743 63.158 7.86 7.86 0.00 4.94
430 530 2.177594 CTGGAGAGAAAGCCAGCGGT 62.178 60.000 0.00 0.00 44.53 5.68
432 532 4.198625 CTGGAGAGAAAGCCAGCG 57.801 61.111 0.00 0.00 44.53 5.18
435 535 0.979665 CTGGACTGGAGAGAAAGCCA 59.020 55.000 0.00 0.00 0.00 4.75
436 536 0.251634 CCTGGACTGGAGAGAAAGCC 59.748 60.000 0.00 0.00 0.00 4.35
437 537 0.392327 GCCTGGACTGGAGAGAAAGC 60.392 60.000 0.00 0.00 0.00 3.51
438 538 0.251634 GGCCTGGACTGGAGAGAAAG 59.748 60.000 0.00 0.00 0.00 2.62
439 539 1.201429 GGGCCTGGACTGGAGAGAAA 61.201 60.000 0.84 0.00 0.00 2.52
440 540 1.613630 GGGCCTGGACTGGAGAGAA 60.614 63.158 0.84 0.00 0.00 2.87
441 541 2.039624 GGGCCTGGACTGGAGAGA 59.960 66.667 0.84 0.00 0.00 3.10
442 542 3.465403 CGGGCCTGGACTGGAGAG 61.465 72.222 2.57 0.00 0.00 3.20
483 583 7.725844 AGAGAGAGAAAGAGATAGAAAGGGATC 59.274 40.741 0.00 0.00 0.00 3.36
500 600 3.551635 AAGGGGTGAAGAGAGAGAGAA 57.448 47.619 0.00 0.00 0.00 2.87
501 601 3.551635 AAAGGGGTGAAGAGAGAGAGA 57.448 47.619 0.00 0.00 0.00 3.10
502 602 5.948742 AATAAAGGGGTGAAGAGAGAGAG 57.051 43.478 0.00 0.00 0.00 3.20
503 603 7.996758 AATAATAAAGGGGTGAAGAGAGAGA 57.003 36.000 0.00 0.00 0.00 3.10
596 696 6.500589 TCCCCCAAAAAGAGATGTATCTAG 57.499 41.667 0.00 0.00 37.25 2.43
597 697 6.631766 CGTTCCCCCAAAAAGAGATGTATCTA 60.632 42.308 0.00 0.00 37.25 1.98
598 698 5.510430 GTTCCCCCAAAAAGAGATGTATCT 58.490 41.667 0.00 0.00 40.50 1.98
599 699 4.335594 CGTTCCCCCAAAAAGAGATGTATC 59.664 45.833 0.00 0.00 0.00 2.24
795 981 6.848451 TGGATCGCTCAAGGTAAAAATAAAC 58.152 36.000 0.00 0.00 0.00 2.01
810 1010 3.561725 CCCAGTTAAAAGATGGATCGCTC 59.438 47.826 0.00 0.00 36.09 5.03
875 1093 6.741801 GCCGCTCTCCTATCTTTTACCTTTAT 60.742 42.308 0.00 0.00 0.00 1.40
953 1171 1.573108 TAGGCTTGAGGAAGGAGGTG 58.427 55.000 0.00 0.00 0.00 4.00
1088 1321 4.465512 GCCAACACCAGCGATGCG 62.466 66.667 0.00 0.00 0.00 4.73
1151 1396 6.070767 TGTCCAGACAGACCCTAAGAAATAAG 60.071 42.308 0.00 0.00 36.21 1.73
1161 1406 1.203237 AGATGTGTCCAGACAGACCCT 60.203 52.381 0.00 0.00 42.74 4.34
1162 1407 1.270907 AGATGTGTCCAGACAGACCC 58.729 55.000 0.00 0.00 42.74 4.46
1163 1408 3.357203 TCTAGATGTGTCCAGACAGACC 58.643 50.000 0.00 0.00 42.74 3.85
1164 1409 4.930963 CATCTAGATGTGTCCAGACAGAC 58.069 47.826 22.42 0.00 42.74 3.51
1190 1435 8.923683 CATCAGCTTAGATGTGACATAACTATG 58.076 37.037 0.00 0.92 40.35 2.23
1204 1449 4.029520 ACAGAGTGGACATCAGCTTAGAT 58.970 43.478 0.00 0.00 0.00 1.98
1205 1450 3.435275 ACAGAGTGGACATCAGCTTAGA 58.565 45.455 0.00 0.00 0.00 2.10
1206 1451 3.883830 ACAGAGTGGACATCAGCTTAG 57.116 47.619 0.00 0.00 0.00 2.18
1207 1452 4.202357 ACAAACAGAGTGGACATCAGCTTA 60.202 41.667 0.00 0.00 0.00 3.09
1208 1453 3.144506 CAAACAGAGTGGACATCAGCTT 58.855 45.455 0.00 0.00 0.00 3.74
1209 1454 2.105477 ACAAACAGAGTGGACATCAGCT 59.895 45.455 0.00 0.00 0.00 4.24
1210 1455 2.225019 CACAAACAGAGTGGACATCAGC 59.775 50.000 0.00 0.00 33.43 4.26
1260 1505 9.096160 CCACAAATATATAATGCAGCAACAAAA 57.904 29.630 0.00 0.00 0.00 2.44
1261 1506 7.710044 CCCACAAATATATAATGCAGCAACAAA 59.290 33.333 0.00 0.00 0.00 2.83
1262 1507 7.069208 TCCCACAAATATATAATGCAGCAACAA 59.931 33.333 0.00 0.00 0.00 2.83
1263 1508 6.548993 TCCCACAAATATATAATGCAGCAACA 59.451 34.615 0.00 0.00 0.00 3.33
1264 1509 6.980593 TCCCACAAATATATAATGCAGCAAC 58.019 36.000 0.00 0.00 0.00 4.17
1265 1510 6.294675 GCTCCCACAAATATATAATGCAGCAA 60.295 38.462 0.00 0.00 0.00 3.91
1266 1511 5.183713 GCTCCCACAAATATATAATGCAGCA 59.816 40.000 0.00 0.00 0.00 4.41
1267 1512 5.416952 AGCTCCCACAAATATATAATGCAGC 59.583 40.000 0.00 0.00 0.00 5.25
1268 1513 7.458409 AAGCTCCCACAAATATATAATGCAG 57.542 36.000 0.00 0.00 0.00 4.41
1269 1514 8.382405 TCTAAGCTCCCACAAATATATAATGCA 58.618 33.333 0.00 0.00 0.00 3.96
1270 1515 8.792830 TCTAAGCTCCCACAAATATATAATGC 57.207 34.615 0.00 0.00 0.00 3.56
1273 1518 9.725019 CACATCTAAGCTCCCACAAATATATAA 57.275 33.333 0.00 0.00 0.00 0.98
1274 1519 9.100197 TCACATCTAAGCTCCCACAAATATATA 57.900 33.333 0.00 0.00 0.00 0.86
1275 1520 7.880195 GTCACATCTAAGCTCCCACAAATATAT 59.120 37.037 0.00 0.00 0.00 0.86
1276 1521 7.147567 TGTCACATCTAAGCTCCCACAAATATA 60.148 37.037 0.00 0.00 0.00 0.86
1277 1522 6.058183 GTCACATCTAAGCTCCCACAAATAT 58.942 40.000 0.00 0.00 0.00 1.28
1278 1523 5.045942 TGTCACATCTAAGCTCCCACAAATA 60.046 40.000 0.00 0.00 0.00 1.40
1279 1524 4.263462 TGTCACATCTAAGCTCCCACAAAT 60.263 41.667 0.00 0.00 0.00 2.32
1280 1525 3.072330 TGTCACATCTAAGCTCCCACAAA 59.928 43.478 0.00 0.00 0.00 2.83
1281 1526 2.637382 TGTCACATCTAAGCTCCCACAA 59.363 45.455 0.00 0.00 0.00 3.33
1282 1527 2.256306 TGTCACATCTAAGCTCCCACA 58.744 47.619 0.00 0.00 0.00 4.17
1283 1528 3.462021 GATGTCACATCTAAGCTCCCAC 58.538 50.000 10.81 0.00 0.00 4.61
1284 1529 2.435805 GGATGTCACATCTAAGCTCCCA 59.564 50.000 17.46 0.00 0.00 4.37
1285 1530 2.703007 AGGATGTCACATCTAAGCTCCC 59.297 50.000 17.46 0.00 0.00 4.30
1286 1531 4.414337 AAGGATGTCACATCTAAGCTCC 57.586 45.455 17.46 0.18 0.00 4.70
1287 1532 7.849804 TTTTAAGGATGTCACATCTAAGCTC 57.150 36.000 17.46 0.00 0.00 4.09
1315 1560 7.492669 ACGGTTTGTCTAATTCACATCTAGATG 59.507 37.037 27.63 27.63 44.15 2.90
1316 1561 7.556844 ACGGTTTGTCTAATTCACATCTAGAT 58.443 34.615 0.00 0.00 0.00 1.98
1317 1562 6.931838 ACGGTTTGTCTAATTCACATCTAGA 58.068 36.000 0.00 0.00 0.00 2.43
1318 1563 8.873215 ATACGGTTTGTCTAATTCACATCTAG 57.127 34.615 0.00 0.00 0.00 2.43
1319 1564 9.661563 AAATACGGTTTGTCTAATTCACATCTA 57.338 29.630 0.00 0.00 0.00 1.98
1320 1565 8.561738 AAATACGGTTTGTCTAATTCACATCT 57.438 30.769 0.00 0.00 0.00 2.90
1321 1566 8.665685 AGAAATACGGTTTGTCTAATTCACATC 58.334 33.333 0.00 0.00 0.00 3.06
1322 1567 8.561738 AGAAATACGGTTTGTCTAATTCACAT 57.438 30.769 0.00 0.00 0.00 3.21
1323 1568 7.972832 AGAAATACGGTTTGTCTAATTCACA 57.027 32.000 0.00 0.00 0.00 3.58
1324 1569 9.750882 GTAAGAAATACGGTTTGTCTAATTCAC 57.249 33.333 0.00 0.00 0.00 3.18
1325 1570 9.715121 AGTAAGAAATACGGTTTGTCTAATTCA 57.285 29.630 0.00 0.00 39.62 2.57
1326 1571 9.968743 CAGTAAGAAATACGGTTTGTCTAATTC 57.031 33.333 0.00 0.00 39.62 2.17
1327 1572 9.498176 ACAGTAAGAAATACGGTTTGTCTAATT 57.502 29.630 0.00 0.00 39.49 1.40
1330 1575 9.577110 CATACAGTAAGAAATACGGTTTGTCTA 57.423 33.333 0.00 0.00 39.49 2.59
1331 1576 8.092687 ACATACAGTAAGAAATACGGTTTGTCT 58.907 33.333 8.34 0.00 44.74 3.41
1332 1577 8.248117 ACATACAGTAAGAAATACGGTTTGTC 57.752 34.615 8.34 0.00 44.74 3.18
1338 1583 9.798994 GGGATATACATACAGTAAGAAATACGG 57.201 37.037 0.00 0.00 39.62 4.02
1350 1595 8.731275 TGAAACTGTTTGGGATATACATACAG 57.269 34.615 19.62 19.62 46.46 2.74
1566 1816 6.049149 TGCAATACAGCAGAGAAGGTAATAC 58.951 40.000 0.00 0.00 40.11 1.89
1685 1938 6.429637 ACCTCCGGTAGTTTGTCAAAAAGAC 61.430 44.000 0.00 0.00 40.21 3.01
1959 2215 9.517609 CAAGGTTCATCAGTTATACTGTAGTAC 57.482 37.037 6.71 0.00 46.03 2.73
2069 2333 0.463295 AGCATCTCCATGAACGCAGG 60.463 55.000 0.00 0.00 31.82 4.85
2101 2365 1.215655 AAGCGCACAGTCGTTGAGTC 61.216 55.000 11.47 0.00 0.00 3.36
2228 2496 2.688446 GGTGCAAGGGGTAAGAATAAGC 59.312 50.000 0.00 0.00 0.00 3.09
2537 2808 4.457603 GCGAATATTCTGAGCTCCTCTAGA 59.542 45.833 12.15 4.15 0.00 2.43
2609 2881 6.017523 TGCAACGTTGAACATGAAATCTCTTA 60.018 34.615 31.62 0.00 0.00 2.10
2614 2886 3.120121 GCTGCAACGTTGAACATGAAATC 59.880 43.478 31.62 10.10 0.00 2.17
2616 2888 2.159324 TGCTGCAACGTTGAACATGAAA 60.159 40.909 31.62 5.28 0.00 2.69
2619 2891 1.717113 CATGCTGCAACGTTGAACATG 59.283 47.619 31.62 29.54 32.26 3.21
2808 3104 7.234355 ACCAAAATAAGACTCTCAACATTCCT 58.766 34.615 0.00 0.00 0.00 3.36
3035 3351 1.770324 CCTTTGGGGAGGACTGCTT 59.230 57.895 0.00 0.00 39.25 3.91
3207 3547 7.657354 TCATGACATACTCATTTACCTGCATAC 59.343 37.037 0.00 0.00 37.53 2.39
3234 3574 4.271696 TCTCCAACAACAGGATAGTGTG 57.728 45.455 0.00 0.00 33.99 3.82
3806 6056 6.947464 ACCATACAACTAAACTAGACTGCAT 58.053 36.000 0.00 0.00 0.00 3.96
3847 6097 2.455674 TCGTTTAGCACATCAGCACT 57.544 45.000 0.00 0.00 36.85 4.40
3898 6148 1.670406 GTGCACCTGACTGCCTCAG 60.670 63.158 5.22 2.14 45.63 3.35
3900 6150 1.963338 GTGTGCACCTGACTGCCTC 60.963 63.158 15.69 0.00 36.21 4.70
3901 6151 2.111878 GTGTGCACCTGACTGCCT 59.888 61.111 15.69 0.00 36.21 4.75
3923 7687 4.261031 CCGAACAAAAGAAAGTCGAATGGT 60.261 41.667 0.00 0.00 0.00 3.55
3952 7727 0.247974 GACATCTGCATGTGCGAAGC 60.248 55.000 0.00 0.00 46.32 3.86
3953 7728 1.062148 CTGACATCTGCATGTGCGAAG 59.938 52.381 0.00 1.43 43.79 3.79
3992 7767 9.214957 CAATTCTTTTATGATATGCATGGCAAT 57.785 29.630 10.16 0.00 43.62 3.56
3993 7768 8.422566 TCAATTCTTTTATGATATGCATGGCAA 58.577 29.630 10.16 0.00 43.62 4.52
3994 7769 7.953752 TCAATTCTTTTATGATATGCATGGCA 58.046 30.769 10.16 7.64 44.86 4.92
3995 7770 8.821147 TTCAATTCTTTTATGATATGCATGGC 57.179 30.769 10.16 1.20 37.87 4.40
4012 7787 9.690913 TCTAACCATCTGATTGATTTCAATTCT 57.309 29.630 7.20 0.00 45.72 2.40
4016 7791 7.394077 TGCTTCTAACCATCTGATTGATTTCAA 59.606 33.333 0.00 0.00 40.51 2.69
4017 7792 6.885918 TGCTTCTAACCATCTGATTGATTTCA 59.114 34.615 0.00 0.00 32.05 2.69
4018 7793 7.281774 TCTGCTTCTAACCATCTGATTGATTTC 59.718 37.037 0.00 0.00 32.05 2.17
4019 7794 7.114754 TCTGCTTCTAACCATCTGATTGATTT 58.885 34.615 0.00 0.00 32.05 2.17
4020 7795 6.656902 TCTGCTTCTAACCATCTGATTGATT 58.343 36.000 0.00 0.00 32.05 2.57
4021 7796 6.244552 TCTGCTTCTAACCATCTGATTGAT 57.755 37.500 0.00 0.00 35.40 2.57
4022 7797 5.682234 TCTGCTTCTAACCATCTGATTGA 57.318 39.130 0.00 0.00 0.00 2.57
4023 7798 6.596888 TCTTTCTGCTTCTAACCATCTGATTG 59.403 38.462 0.00 0.00 0.00 2.67
4024 7799 6.715280 TCTTTCTGCTTCTAACCATCTGATT 58.285 36.000 0.00 0.00 0.00 2.57
4025 7800 6.305272 TCTTTCTGCTTCTAACCATCTGAT 57.695 37.500 0.00 0.00 0.00 2.90
4026 7801 5.745312 TCTTTCTGCTTCTAACCATCTGA 57.255 39.130 0.00 0.00 0.00 3.27
4027 7802 6.622462 GCTTTCTTTCTGCTTCTAACCATCTG 60.622 42.308 0.00 0.00 0.00 2.90
4028 7803 5.414144 GCTTTCTTTCTGCTTCTAACCATCT 59.586 40.000 0.00 0.00 0.00 2.90
4029 7804 5.182001 TGCTTTCTTTCTGCTTCTAACCATC 59.818 40.000 0.00 0.00 0.00 3.51
4030 7805 5.072741 TGCTTTCTTTCTGCTTCTAACCAT 58.927 37.500 0.00 0.00 0.00 3.55
4031 7806 4.460263 TGCTTTCTTTCTGCTTCTAACCA 58.540 39.130 0.00 0.00 0.00 3.67
4032 7807 4.757149 TCTGCTTTCTTTCTGCTTCTAACC 59.243 41.667 0.00 0.00 0.00 2.85
4033 7808 5.698545 TCTCTGCTTTCTTTCTGCTTCTAAC 59.301 40.000 0.00 0.00 0.00 2.34
4034 7809 5.698545 GTCTCTGCTTTCTTTCTGCTTCTAA 59.301 40.000 0.00 0.00 0.00 2.10
4035 7810 5.221521 TGTCTCTGCTTTCTTTCTGCTTCTA 60.222 40.000 0.00 0.00 0.00 2.10
4036 7811 4.064388 GTCTCTGCTTTCTTTCTGCTTCT 58.936 43.478 0.00 0.00 0.00 2.85
4037 7812 3.812053 TGTCTCTGCTTTCTTTCTGCTTC 59.188 43.478 0.00 0.00 0.00 3.86
4038 7813 3.813443 TGTCTCTGCTTTCTTTCTGCTT 58.187 40.909 0.00 0.00 0.00 3.91
4039 7814 3.482156 TGTCTCTGCTTTCTTTCTGCT 57.518 42.857 0.00 0.00 0.00 4.24
4040 7815 3.501445 ACATGTCTCTGCTTTCTTTCTGC 59.499 43.478 0.00 0.00 0.00 4.26
4041 7816 4.143158 CGACATGTCTCTGCTTTCTTTCTG 60.143 45.833 22.95 0.00 0.00 3.02
4042 7817 3.993081 CGACATGTCTCTGCTTTCTTTCT 59.007 43.478 22.95 0.00 0.00 2.52
4043 7818 3.990469 TCGACATGTCTCTGCTTTCTTTC 59.010 43.478 22.95 0.00 0.00 2.62
4044 7819 3.993081 CTCGACATGTCTCTGCTTTCTTT 59.007 43.478 22.95 0.00 0.00 2.52
4045 7820 3.583806 CTCGACATGTCTCTGCTTTCTT 58.416 45.455 22.95 0.00 0.00 2.52
4046 7821 2.094286 CCTCGACATGTCTCTGCTTTCT 60.094 50.000 22.95 0.00 0.00 2.52
4047 7822 2.094494 TCCTCGACATGTCTCTGCTTTC 60.094 50.000 22.95 0.00 0.00 2.62
4048 7823 1.895798 TCCTCGACATGTCTCTGCTTT 59.104 47.619 22.95 0.00 0.00 3.51
4049 7824 1.550327 TCCTCGACATGTCTCTGCTT 58.450 50.000 22.95 0.00 0.00 3.91
4050 7825 1.550327 TTCCTCGACATGTCTCTGCT 58.450 50.000 22.95 0.00 0.00 4.24
4051 7826 2.370281 TTTCCTCGACATGTCTCTGC 57.630 50.000 22.95 0.00 0.00 4.26
4052 7827 4.436584 GCATTTTTCCTCGACATGTCTCTG 60.437 45.833 22.95 12.32 0.00 3.35
4053 7828 3.686726 GCATTTTTCCTCGACATGTCTCT 59.313 43.478 22.95 0.00 0.00 3.10
4054 7829 3.436704 TGCATTTTTCCTCGACATGTCTC 59.563 43.478 22.95 0.00 0.00 3.36
4055 7830 3.189287 GTGCATTTTTCCTCGACATGTCT 59.811 43.478 22.95 0.00 0.00 3.41
4056 7831 3.058293 TGTGCATTTTTCCTCGACATGTC 60.058 43.478 16.21 16.21 0.00 3.06
4057 7832 2.884012 TGTGCATTTTTCCTCGACATGT 59.116 40.909 0.00 0.00 0.00 3.21
4058 7833 3.557577 TGTGCATTTTTCCTCGACATG 57.442 42.857 0.00 0.00 0.00 3.21
4059 7834 3.758023 TCATGTGCATTTTTCCTCGACAT 59.242 39.130 0.00 0.00 0.00 3.06
4060 7835 3.145286 TCATGTGCATTTTTCCTCGACA 58.855 40.909 0.00 0.00 0.00 4.35
4061 7836 3.829886 TCATGTGCATTTTTCCTCGAC 57.170 42.857 0.00 0.00 0.00 4.20
4062 7837 3.567585 TGTTCATGTGCATTTTTCCTCGA 59.432 39.130 0.00 0.00 0.00 4.04
4063 7838 3.670055 GTGTTCATGTGCATTTTTCCTCG 59.330 43.478 0.00 0.00 0.00 4.63
4064 7839 4.619973 TGTGTTCATGTGCATTTTTCCTC 58.380 39.130 0.00 0.00 0.00 3.71
4065 7840 4.669206 TGTGTTCATGTGCATTTTTCCT 57.331 36.364 0.00 0.00 0.00 3.36
4066 7841 5.927954 ATTGTGTTCATGTGCATTTTTCC 57.072 34.783 0.00 0.00 0.00 3.13
4067 7842 7.381948 TGTCTATTGTGTTCATGTGCATTTTTC 59.618 33.333 0.00 0.00 0.00 2.29
4068 7843 7.208777 TGTCTATTGTGTTCATGTGCATTTTT 58.791 30.769 0.00 0.00 0.00 1.94
4069 7844 6.747125 TGTCTATTGTGTTCATGTGCATTTT 58.253 32.000 0.00 0.00 0.00 1.82
4070 7845 6.330004 TGTCTATTGTGTTCATGTGCATTT 57.670 33.333 0.00 0.00 0.00 2.32
4071 7846 5.620654 GCTGTCTATTGTGTTCATGTGCATT 60.621 40.000 0.00 0.00 0.00 3.56
4072 7847 4.142534 GCTGTCTATTGTGTTCATGTGCAT 60.143 41.667 0.00 0.00 0.00 3.96
4073 7848 3.189080 GCTGTCTATTGTGTTCATGTGCA 59.811 43.478 0.00 0.00 0.00 4.57
4074 7849 3.189080 TGCTGTCTATTGTGTTCATGTGC 59.811 43.478 0.00 0.00 0.00 4.57
4075 7850 4.692155 TCTGCTGTCTATTGTGTTCATGTG 59.308 41.667 0.00 0.00 0.00 3.21
4076 7851 4.898320 TCTGCTGTCTATTGTGTTCATGT 58.102 39.130 0.00 0.00 0.00 3.21
4077 7852 5.583457 TGATCTGCTGTCTATTGTGTTCATG 59.417 40.000 0.00 0.00 0.00 3.07
4078 7853 5.737860 TGATCTGCTGTCTATTGTGTTCAT 58.262 37.500 0.00 0.00 0.00 2.57
4079 7854 5.151297 TGATCTGCTGTCTATTGTGTTCA 57.849 39.130 0.00 0.00 0.00 3.18
4080 7855 4.569966 CCTGATCTGCTGTCTATTGTGTTC 59.430 45.833 0.00 0.00 0.00 3.18
4081 7856 4.511527 CCTGATCTGCTGTCTATTGTGTT 58.488 43.478 0.00 0.00 0.00 3.32
4082 7857 3.681034 GCCTGATCTGCTGTCTATTGTGT 60.681 47.826 0.00 0.00 0.00 3.72
4083 7858 2.871022 GCCTGATCTGCTGTCTATTGTG 59.129 50.000 0.00 0.00 0.00 3.33
4084 7859 2.482664 CGCCTGATCTGCTGTCTATTGT 60.483 50.000 6.30 0.00 0.00 2.71
4085 7860 2.133553 CGCCTGATCTGCTGTCTATTG 58.866 52.381 6.30 0.00 0.00 1.90
4086 7861 1.539929 GCGCCTGATCTGCTGTCTATT 60.540 52.381 0.00 0.00 0.00 1.73
4087 7862 0.033228 GCGCCTGATCTGCTGTCTAT 59.967 55.000 0.00 0.00 0.00 1.98
4088 7863 1.439228 GCGCCTGATCTGCTGTCTA 59.561 57.895 0.00 0.00 0.00 2.59
4089 7864 2.186384 GCGCCTGATCTGCTGTCT 59.814 61.111 0.00 0.00 0.00 3.41
4090 7865 2.894387 GGCGCCTGATCTGCTGTC 60.894 66.667 22.15 0.00 0.00 3.51
4091 7866 4.827087 CGGCGCCTGATCTGCTGT 62.827 66.667 26.68 0.00 0.00 4.40
4103 7878 0.676782 ATTCCCATATTAGGCGGCGC 60.677 55.000 26.17 26.17 0.00 6.53
4104 7879 1.369625 GATTCCCATATTAGGCGGCG 58.630 55.000 0.51 0.51 0.00 6.46
4105 7880 1.282157 AGGATTCCCATATTAGGCGGC 59.718 52.381 0.00 0.00 33.88 6.53
4106 7881 3.721087 AAGGATTCCCATATTAGGCGG 57.279 47.619 0.00 0.00 33.88 6.13
4107 7882 5.534654 TGAAAAAGGATTCCCATATTAGGCG 59.465 40.000 0.00 0.00 33.88 5.52
4108 7883 6.551227 ACTGAAAAAGGATTCCCATATTAGGC 59.449 38.462 0.00 0.00 33.88 3.93
4109 7884 8.416329 CAACTGAAAAAGGATTCCCATATTAGG 58.584 37.037 0.00 0.00 33.88 2.69
4110 7885 7.922811 GCAACTGAAAAAGGATTCCCATATTAG 59.077 37.037 0.00 0.00 33.88 1.73
4111 7886 7.147742 GGCAACTGAAAAAGGATTCCCATATTA 60.148 37.037 0.00 0.00 33.88 0.98
4112 7887 6.352137 GGCAACTGAAAAAGGATTCCCATATT 60.352 38.462 0.00 0.00 33.88 1.28
4113 7888 5.129320 GGCAACTGAAAAAGGATTCCCATAT 59.871 40.000 0.00 0.00 33.88 1.78
4114 7889 4.466015 GGCAACTGAAAAAGGATTCCCATA 59.534 41.667 0.00 0.00 33.88 2.74
4115 7890 3.261643 GGCAACTGAAAAAGGATTCCCAT 59.738 43.478 0.00 0.00 33.88 4.00
4116 7891 2.632512 GGCAACTGAAAAAGGATTCCCA 59.367 45.455 0.00 0.00 33.88 4.37
4117 7892 3.319137 GGCAACTGAAAAAGGATTCCC 57.681 47.619 0.00 0.00 0.00 3.97
4145 7920 6.670695 TGTATGTACATGTGCTATCCAGAT 57.329 37.500 18.81 1.11 0.00 2.90
4146 7921 6.098266 ACTTGTATGTACATGTGCTATCCAGA 59.902 38.462 18.81 0.00 41.29 3.86
4162 7937 5.352284 GGTCGATCATCAAGACTTGTATGT 58.648 41.667 14.75 8.13 35.42 2.29
4196 7971 1.263776 CGAGCGTGCTTCTCTAGTTG 58.736 55.000 0.00 0.00 0.00 3.16
4200 7975 1.667154 ATGGCGAGCGTGCTTCTCTA 61.667 55.000 0.00 0.00 34.52 2.43
4323 8099 0.250038 CGTGCTCAATCGATCCCCAT 60.250 55.000 0.00 0.00 0.00 4.00
4488 8264 4.222847 CGAGGAAGGGGCTACCGC 62.223 72.222 0.00 0.00 46.96 5.68
4489 8265 3.537874 CCGAGGAAGGGGCTACCG 61.538 72.222 0.00 0.00 46.96 4.02
4522 8298 3.707189 AGGGTGGGTAGGAGGGGG 61.707 72.222 0.00 0.00 0.00 5.40
4523 8299 2.366972 CAGGGTGGGTAGGAGGGG 60.367 72.222 0.00 0.00 0.00 4.79
4524 8300 1.689582 GTCAGGGTGGGTAGGAGGG 60.690 68.421 0.00 0.00 0.00 4.30
4525 8301 1.689582 GGTCAGGGTGGGTAGGAGG 60.690 68.421 0.00 0.00 0.00 4.30
4526 8302 0.688087 GAGGTCAGGGTGGGTAGGAG 60.688 65.000 0.00 0.00 0.00 3.69
4527 8303 1.390926 GAGGTCAGGGTGGGTAGGA 59.609 63.158 0.00 0.00 0.00 2.94
4528 8304 2.058595 CGAGGTCAGGGTGGGTAGG 61.059 68.421 0.00 0.00 0.00 3.18
4529 8305 2.058595 CCGAGGTCAGGGTGGGTAG 61.059 68.421 0.00 0.00 0.00 3.18
4530 8306 2.038329 CCGAGGTCAGGGTGGGTA 59.962 66.667 0.00 0.00 0.00 3.69
4531 8307 3.907027 CTCCGAGGTCAGGGTGGGT 62.907 68.421 0.00 0.00 0.00 4.51
4535 8311 2.681778 CAGCTCCGAGGTCAGGGT 60.682 66.667 0.00 0.00 0.00 4.34
4537 8313 4.504916 CGCAGCTCCGAGGTCAGG 62.505 72.222 0.00 0.00 0.00 3.86
4541 8317 4.379243 CCAACGCAGCTCCGAGGT 62.379 66.667 2.80 0.00 0.00 3.85
4561 8337 4.193334 TCAGCCTCCGCGACATCG 62.193 66.667 8.23 0.00 41.18 3.84
4562 8338 2.583593 GTCAGCCTCCGCGACATC 60.584 66.667 8.23 0.00 41.18 3.06
4563 8339 4.498520 CGTCAGCCTCCGCGACAT 62.499 66.667 8.23 0.00 41.18 3.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.