Multiple sequence alignment - TraesCS3B01G520300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G520300 chr3B 100.000 6200 0 0 1 6200 763339578 763345777 0.000000e+00 11450.0
1 TraesCS3B01G520300 chr3B 83.204 899 118 20 4749 5641 763457175 763458046 0.000000e+00 793.0
2 TraesCS3B01G520300 chr3B 81.924 946 110 27 4197 5106 395839923 395839003 0.000000e+00 743.0
3 TraesCS3B01G520300 chr3B 81.521 947 112 29 4197 5106 755045284 755044364 0.000000e+00 721.0
4 TraesCS3B01G520300 chr3B 93.050 259 16 2 1 258 763298139 763298396 1.630000e-100 377.0
5 TraesCS3B01G520300 chr3B 84.000 325 23 8 3434 3757 763611977 763611681 1.020000e-72 285.0
6 TraesCS3B01G520300 chr3B 76.046 693 83 30 331 992 763306610 763307250 3.660000e-72 283.0
7 TraesCS3B01G520300 chr3B 95.960 99 3 1 5746 5844 637538345 637538442 6.430000e-35 159.0
8 TraesCS3B01G520300 chr3B 95.050 101 2 2 5747 5846 637538442 637538344 8.320000e-34 156.0
9 TraesCS3B01G520300 chr3B 97.561 41 1 0 3748 3788 763611667 763611627 3.100000e-08 71.3
10 TraesCS3B01G520300 chr3A 94.127 3967 176 22 2088 6024 708822941 708819002 0.000000e+00 5982.0
11 TraesCS3B01G520300 chr3A 85.122 1593 153 39 1 1526 708825121 708823546 0.000000e+00 1552.0
12 TraesCS3B01G520300 chr3A 84.266 572 43 16 1532 2060 708823502 708822935 1.190000e-141 514.0
13 TraesCS3B01G520300 chr3A 85.207 338 22 10 3421 3757 708653556 708653866 7.750000e-84 322.0
14 TraesCS3B01G520300 chr3A 100.000 35 0 0 3751 3785 708653883 708653917 1.440000e-06 65.8
15 TraesCS3B01G520300 chr3A 97.143 35 1 0 3749 3783 708539261 708539227 6.710000e-05 60.2
16 TraesCS3B01G520300 chr3D 95.068 3650 149 20 2088 5729 573768689 573765063 0.000000e+00 5714.0
17 TraesCS3B01G520300 chr3D 83.595 829 108 12 1 803 573804923 573804097 0.000000e+00 752.0
18 TraesCS3B01G520300 chr3D 84.629 566 36 18 991 1515 573769859 573769304 3.310000e-142 516.0
19 TraesCS3B01G520300 chr3D 83.187 571 49 16 1532 2060 573769248 573768683 4.350000e-131 479.0
20 TraesCS3B01G520300 chr3D 80.597 536 89 8 262 794 573770711 573770188 3.480000e-107 399.0
21 TraesCS3B01G520300 chr3D 87.847 288 22 6 1 277 573811523 573811238 5.990000e-85 326.0
22 TraesCS3B01G520300 chr3D 92.105 228 15 3 1 228 573770932 573770708 1.000000e-82 318.0
23 TraesCS3B01G520300 chr3D 80.215 465 54 17 558 992 573807634 573807178 1.300000e-81 315.0
24 TraesCS3B01G520300 chr3D 89.730 185 19 0 1881 2065 573815121 573814937 2.890000e-58 237.0
25 TraesCS3B01G520300 chr3D 94.118 102 5 1 5744 5845 36168904 36169004 2.990000e-33 154.0
26 TraesCS3B01G520300 chr3D 84.375 160 21 1 318 473 573811240 573811081 2.990000e-33 154.0
27 TraesCS3B01G520300 chr3D 94.898 98 4 1 5747 5844 527004748 527004844 1.080000e-32 152.0
28 TraesCS3B01G520300 chr3D 84.536 97 11 4 991 1087 573807157 573807065 6.620000e-15 93.5
29 TraesCS3B01G520300 chr2A 85.644 1010 130 13 3005 4013 218212971 218211976 0.000000e+00 1048.0
30 TraesCS3B01G520300 chr4B 85.390 1013 134 13 3005 4015 129053213 129054213 0.000000e+00 1038.0
31 TraesCS3B01G520300 chr4B 90.991 111 9 1 5744 5854 216815097 216814988 1.390000e-31 148.0
32 TraesCS3B01G520300 chr6B 82.677 1016 134 21 3005 4015 534189443 534188465 0.000000e+00 863.0
33 TraesCS3B01G520300 chr6B 82.837 571 64 17 4147 4686 675196474 675195907 1.210000e-131 481.0
34 TraesCS3B01G520300 chr1D 83.368 950 99 28 4197 5106 386378331 386377401 0.000000e+00 824.0
35 TraesCS3B01G520300 chr6D 83.001 953 99 39 4197 5106 86934415 86935347 0.000000e+00 804.0
36 TraesCS3B01G520300 chr6D 91.667 108 8 1 5747 5854 428262041 428262147 1.390000e-31 148.0
37 TraesCS3B01G520300 chr6A 82.927 943 105 26 4201 5106 369412481 369411558 0.000000e+00 798.0
38 TraesCS3B01G520300 chr6A 91.667 108 7 2 5744 5851 87311434 87311329 1.390000e-31 148.0
39 TraesCS3B01G520300 chr5B 80.967 951 117 30 4197 5106 195738451 195739378 0.000000e+00 695.0
40 TraesCS3B01G520300 chr5B 93.396 106 6 1 5734 5839 530625022 530625126 8.320000e-34 156.0
41 TraesCS3B01G520300 chr7A 81.100 709 87 20 4197 4866 53973821 53974521 1.980000e-144 523.0
42 TraesCS3B01G520300 chr5A 91.071 112 6 2 5742 5853 230755591 230755698 1.390000e-31 148.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G520300 chr3B 763339578 763345777 6199 False 11450.000000 11450 100.000000 1 6200 1 chr3B.!!$F4 6199
1 TraesCS3B01G520300 chr3B 763457175 763458046 871 False 793.000000 793 83.204000 4749 5641 1 chr3B.!!$F5 892
2 TraesCS3B01G520300 chr3B 395839003 395839923 920 True 743.000000 743 81.924000 4197 5106 1 chr3B.!!$R1 909
3 TraesCS3B01G520300 chr3B 755044364 755045284 920 True 721.000000 721 81.521000 4197 5106 1 chr3B.!!$R3 909
4 TraesCS3B01G520300 chr3B 763306610 763307250 640 False 283.000000 283 76.046000 331 992 1 chr3B.!!$F3 661
5 TraesCS3B01G520300 chr3A 708819002 708825121 6119 True 2682.666667 5982 87.838333 1 6024 3 chr3A.!!$R2 6023
6 TraesCS3B01G520300 chr3D 573765063 573770932 5869 True 1485.200000 5714 87.117200 1 5729 5 chr3D.!!$R1 5728
7 TraesCS3B01G520300 chr3D 573804097 573815121 11024 True 312.916667 752 85.049667 1 2065 6 chr3D.!!$R2 2064
8 TraesCS3B01G520300 chr2A 218211976 218212971 995 True 1048.000000 1048 85.644000 3005 4013 1 chr2A.!!$R1 1008
9 TraesCS3B01G520300 chr4B 129053213 129054213 1000 False 1038.000000 1038 85.390000 3005 4015 1 chr4B.!!$F1 1010
10 TraesCS3B01G520300 chr6B 534188465 534189443 978 True 863.000000 863 82.677000 3005 4015 1 chr6B.!!$R1 1010
11 TraesCS3B01G520300 chr6B 675195907 675196474 567 True 481.000000 481 82.837000 4147 4686 1 chr6B.!!$R2 539
12 TraesCS3B01G520300 chr1D 386377401 386378331 930 True 824.000000 824 83.368000 4197 5106 1 chr1D.!!$R1 909
13 TraesCS3B01G520300 chr6D 86934415 86935347 932 False 804.000000 804 83.001000 4197 5106 1 chr6D.!!$F1 909
14 TraesCS3B01G520300 chr6A 369411558 369412481 923 True 798.000000 798 82.927000 4201 5106 1 chr6A.!!$R2 905
15 TraesCS3B01G520300 chr5B 195738451 195739378 927 False 695.000000 695 80.967000 4197 5106 1 chr5B.!!$F1 909
16 TraesCS3B01G520300 chr7A 53973821 53974521 700 False 523.000000 523 81.100000 4197 4866 1 chr7A.!!$F1 669

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
183 3792 0.031994 ATGTGTGTTTTCGCCAAGGC 59.968 50.0 0.00 0.0 37.85 4.35 F
1599 12108 0.035820 CCTTAGTGGCCGCCTAAACA 60.036 55.0 14.07 0.0 0.00 2.83 F
2195 12746 0.031178 CACAGGCCAGTGCTTTTGAC 59.969 55.0 16.01 0.0 37.74 3.18 F
2567 13118 0.324943 AACCAGTTGCTGCTACCGAT 59.675 50.0 10.52 0.0 0.00 4.18 F
3576 14129 0.387929 GTCCACAGTCCGTGTTCTGA 59.612 55.0 0.00 0.0 44.78 3.27 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2174 12725 0.031178 CAAAAGCACTGGCCTGTGAC 59.969 55.000 38.22 28.99 42.56 3.67 R
2993 13544 1.141858 CAGGGACTATTTGAGCCCTCC 59.858 57.143 0.00 0.00 45.14 4.30 R
3576 14129 1.471119 CTGTCCATGCTTTGGCTGAT 58.529 50.000 1.73 0.00 46.01 2.90 R
4551 15150 1.447314 GGCTGCAATTTGGCTCTGC 60.447 57.895 0.50 0.00 36.60 4.26 R
5538 16154 0.106268 TGTGGTTGTGGGCTTGTCAT 60.106 50.000 0.00 0.00 0.00 3.06 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 3634 6.371595 TCCATTCCTAAATGTGGCAATTTT 57.628 33.333 11.13 6.95 40.63 1.82
147 3749 5.570973 TGATTTTGTTTGTTGACAAGTGACG 59.429 36.000 0.00 0.00 40.33 4.35
148 3750 4.750952 TTTGTTTGTTGACAAGTGACGA 57.249 36.364 0.00 0.00 40.33 4.20
151 3753 3.935828 TGTTTGTTGACAAGTGACGATGA 59.064 39.130 0.00 0.00 37.15 2.92
171 3780 4.980573 TGAGGGTAGCTTAAAATGTGTGT 58.019 39.130 0.00 0.00 0.00 3.72
183 3792 0.031994 ATGTGTGTTTTCGCCAAGGC 59.968 50.000 0.00 0.00 37.85 4.35
269 3878 6.832520 TGCAAAGACCATAAATCTAAGCAA 57.167 33.333 0.00 0.00 34.85 3.91
360 10606 3.392947 TCAACAACCTTCCATGGTCTACA 59.607 43.478 12.58 0.00 39.83 2.74
367 10613 2.959507 TCCATGGTCTACACATGACG 57.040 50.000 12.58 0.00 46.60 4.35
416 10662 5.412594 TCTGCATTACTTTTCTTGTAGCCTG 59.587 40.000 0.00 0.00 0.00 4.85
422 10668 5.690997 ACTTTTCTTGTAGCCTGCTAAAC 57.309 39.130 0.00 0.00 0.00 2.01
431 10677 5.175859 TGTAGCCTGCTAAACATGTTAGTC 58.824 41.667 12.39 4.35 0.00 2.59
445 10691 2.039348 TGTTAGTCCTAGTGGCCAAACC 59.961 50.000 7.24 0.00 39.84 3.27
461 10730 6.962311 TGGCCAAACCAGATAGATAGATAGAT 59.038 38.462 0.61 0.00 46.36 1.98
499 10770 0.946221 GGCGGTATGAATGAGAGGCG 60.946 60.000 0.00 0.00 0.00 5.52
531 10802 3.914426 TTTATCTCTGACAAGGAGGCC 57.086 47.619 0.00 0.00 0.00 5.19
551 10822 3.126858 GCCGAATGTAGCAAGATTCAACA 59.873 43.478 0.00 0.00 35.60 3.33
576 10847 3.358111 TGTTGAGGACACAAGGACAAA 57.642 42.857 0.00 0.00 32.00 2.83
614 10885 2.499289 CTCAGTCCTACTGTTGCCTGAT 59.501 50.000 6.93 0.00 46.03 2.90
653 10924 3.007831 TCATGGTTTCCATTTTGGCCTTC 59.992 43.478 3.32 0.00 42.23 3.46
689 10960 1.003262 CGTTGGTGCTCGCATTTTGG 61.003 55.000 0.00 0.00 0.00 3.28
732 11003 2.058798 GCGATGTTCGTTCAGTGAGAA 58.941 47.619 0.00 0.00 42.81 2.87
744 11015 2.949644 TCAGTGAGAACAGACGTCTTCA 59.050 45.455 17.26 14.47 0.00 3.02
745 11016 3.046390 CAGTGAGAACAGACGTCTTCAC 58.954 50.000 28.64 28.64 38.07 3.18
756 11027 2.224606 ACGTCTTCACCGACTACAGAA 58.775 47.619 0.00 0.00 0.00 3.02
807 11162 3.887621 TGATGTACCAGCTCAGTTACC 57.112 47.619 0.00 0.00 0.00 2.85
817 11172 2.826725 AGCTCAGTTACCTGTACAGACC 59.173 50.000 24.68 8.46 39.82 3.85
849 11230 6.237019 CGAAGTTAATCGAACACATGCATTTG 60.237 38.462 11.29 11.29 45.48 2.32
856 11237 3.614630 CGAACACATGCATTTGGGATTGT 60.615 43.478 16.81 0.00 0.00 2.71
857 11238 4.380339 CGAACACATGCATTTGGGATTGTA 60.380 41.667 16.81 0.00 0.00 2.41
858 11239 4.454728 ACACATGCATTTGGGATTGTAC 57.545 40.909 16.81 0.00 0.00 2.90
867 11248 7.807198 TGCATTTGGGATTGTACTAGGTAATA 58.193 34.615 0.00 0.00 0.00 0.98
869 11250 7.094762 GCATTTGGGATTGTACTAGGTAATAGC 60.095 40.741 0.00 0.00 34.56 2.97
899 11283 6.155475 TCATTATTTATCCCCCGCAAAAAG 57.845 37.500 0.00 0.00 0.00 2.27
904 11288 1.937191 ATCCCCCGCAAAAAGAACAT 58.063 45.000 0.00 0.00 0.00 2.71
957 11341 3.821033 ACCAAAGGCATTATTATCGGAGC 59.179 43.478 0.00 0.00 0.00 4.70
958 11342 3.820467 CCAAAGGCATTATTATCGGAGCA 59.180 43.478 0.00 0.00 0.00 4.26
963 11347 3.120060 GGCATTATTATCGGAGCAAGCAG 60.120 47.826 0.00 0.00 0.00 4.24
1040 11457 0.038310 CACTTCCCCTCCACCCTTTC 59.962 60.000 0.00 0.00 0.00 2.62
1068 11489 2.684104 GGGCTTTCTTCCCTCCCC 59.316 66.667 0.00 0.00 40.66 4.81
1069 11490 2.238701 GGGCTTTCTTCCCTCCCCA 61.239 63.158 0.00 0.00 40.66 4.96
1070 11491 1.000771 GGCTTTCTTCCCTCCCCAC 60.001 63.158 0.00 0.00 0.00 4.61
1071 11492 1.501654 GGCTTTCTTCCCTCCCCACT 61.502 60.000 0.00 0.00 0.00 4.00
1106 11527 4.825679 CCCTCCCTCCCTCACCCC 62.826 77.778 0.00 0.00 0.00 4.95
1255 11689 2.202878 GCATCGCGTTCCCTGCTA 60.203 61.111 5.77 0.00 0.00 3.49
1296 11744 2.836793 GCTCCGAGGTACGAGGCTC 61.837 68.421 3.87 3.87 45.77 4.70
1346 11794 2.956964 CCGTTCGCGATCTCTGGC 60.957 66.667 10.88 0.00 44.71 4.85
1347 11795 2.956964 CGTTCGCGATCTCTGGCC 60.957 66.667 10.88 0.00 44.71 5.36
1366 11815 3.406361 GCGCCGCACCGATATCTG 61.406 66.667 3.15 0.00 0.00 2.90
1367 11816 3.406361 CGCCGCACCGATATCTGC 61.406 66.667 6.84 6.84 0.00 4.26
1371 11839 1.300465 CGCACCGATATCTGCTGCT 60.300 57.895 13.32 0.00 0.00 4.24
1395 11863 0.242017 AGAAATTTCGTGCTGCTGGC 59.758 50.000 12.42 0.00 42.22 4.85
1398 11866 1.533625 AATTTCGTGCTGCTGGCTTA 58.466 45.000 0.00 0.00 42.39 3.09
1406 11874 1.072806 TGCTGCTGGCTTATAGGATGG 59.927 52.381 0.00 0.00 42.39 3.51
1407 11875 1.818642 CTGCTGGCTTATAGGATGGC 58.181 55.000 0.00 0.00 0.00 4.40
1435 11903 2.355513 GCCATGTTCCTCATCACTGTCT 60.356 50.000 0.00 0.00 34.09 3.41
1442 11910 2.428530 TCCTCATCACTGTCTGATTCGG 59.571 50.000 0.00 0.00 37.53 4.30
1443 11911 2.482664 CCTCATCACTGTCTGATTCGGG 60.483 54.545 0.00 0.00 37.53 5.14
1464 11932 3.306156 GGTCCGGGAATAGATGCTAGTTC 60.306 52.174 0.00 0.00 0.00 3.01
1481 11949 1.588861 GTTCGATTTACTCTCTGCGCC 59.411 52.381 4.18 0.00 0.00 6.53
1501 11969 2.203070 GGATGTCCAATCCGCGCT 60.203 61.111 5.56 0.00 35.64 5.92
1505 11973 2.434185 GTCCAATCCGCGCTGTGA 60.434 61.111 5.56 0.00 0.00 3.58
1508 11976 2.753966 CCAATCCGCGCTGTGAAGG 61.754 63.158 5.56 0.00 0.00 3.46
1516 11987 1.739562 CGCTGTGAAGGAGGACTGC 60.740 63.158 0.00 0.00 34.64 4.40
1521 11992 0.898320 GTGAAGGAGGACTGCTGCTA 59.102 55.000 0.00 0.00 0.00 3.49
1526 11997 1.484240 AGGAGGACTGCTGCTATGTTC 59.516 52.381 0.00 0.00 0.00 3.18
1527 11998 1.208052 GGAGGACTGCTGCTATGTTCA 59.792 52.381 0.00 0.00 0.00 3.18
1528 11999 2.548875 GAGGACTGCTGCTATGTTCAG 58.451 52.381 0.00 0.00 34.79 3.02
1529 12000 2.167281 GAGGACTGCTGCTATGTTCAGA 59.833 50.000 0.00 0.00 33.54 3.27
1530 12001 2.093764 AGGACTGCTGCTATGTTCAGAC 60.094 50.000 0.00 0.00 33.54 3.51
1531 12002 2.093764 GGACTGCTGCTATGTTCAGACT 60.094 50.000 0.00 0.00 33.54 3.24
1532 12003 3.131223 GGACTGCTGCTATGTTCAGACTA 59.869 47.826 0.00 0.00 33.54 2.59
1533 12004 4.358851 GACTGCTGCTATGTTCAGACTAG 58.641 47.826 0.00 0.00 33.54 2.57
1535 12006 4.142271 ACTGCTGCTATGTTCAGACTAGAC 60.142 45.833 0.00 0.00 33.54 2.59
1536 12007 3.763897 TGCTGCTATGTTCAGACTAGACA 59.236 43.478 0.00 0.00 33.54 3.41
1537 12008 4.109050 GCTGCTATGTTCAGACTAGACAC 58.891 47.826 0.00 0.00 33.54 3.67
1545 12053 9.676195 CTATGTTCAGACTAGACACTATCAATG 57.324 37.037 0.00 0.00 0.00 2.82
1552 12060 7.434897 CAGACTAGACACTATCAATGAGCTTTC 59.565 40.741 0.00 0.00 0.00 2.62
1577 12086 5.763698 AGTCATGTGATGCATATCTGAAAGG 59.236 40.000 0.00 0.00 35.74 3.11
1580 12089 4.454678 TGTGATGCATATCTGAAAGGGAC 58.545 43.478 0.00 0.00 34.31 4.46
1590 12099 0.696501 TGAAAGGGACCTTAGTGGCC 59.303 55.000 3.65 0.00 40.22 5.36
1599 12108 0.035820 CCTTAGTGGCCGCCTAAACA 60.036 55.000 14.07 0.00 0.00 2.83
1614 12123 4.082463 GCCTAAACAATCCGAAATCCACAA 60.082 41.667 0.00 0.00 0.00 3.33
1629 12138 8.908678 CGAAATCCACAATATAGATGCAAATTG 58.091 33.333 0.00 0.00 35.83 2.32
1638 12147 9.006215 CAATATAGATGCAAATTGTGATATGCG 57.994 33.333 0.00 0.00 41.61 4.73
1639 12148 4.906065 AGATGCAAATTGTGATATGCGT 57.094 36.364 0.00 0.00 41.61 5.24
1644 12153 5.225642 TGCAAATTGTGATATGCGTTTTCA 58.774 33.333 0.00 0.00 41.61 2.69
1652 12162 4.031652 GTGATATGCGTTTTCATTTGTGCC 59.968 41.667 0.00 0.00 0.00 5.01
1712 12223 6.351371 CCTTGATAGTGTCTATCAACCACTGT 60.351 42.308 20.99 0.00 39.63 3.55
1747 12275 2.749076 CTGCTTGCAGTTGCCTGTATTA 59.251 45.455 13.89 0.00 41.02 0.98
1770 12298 4.219115 TCCTCATTCTCAGTATCCCTGAC 58.781 47.826 0.00 0.00 45.34 3.51
1795 12323 1.301558 AGCAGTCAGCACAGCTCAC 60.302 57.895 0.00 0.00 41.31 3.51
1804 12332 2.093310 CAGCACAGCTCACTTACATTCG 59.907 50.000 0.00 0.00 36.40 3.34
1805 12333 1.201965 GCACAGCTCACTTACATTCGC 60.202 52.381 0.00 0.00 0.00 4.70
1830 12358 7.173390 GCTGTGTTCCTACATTCTCTTTAAGTT 59.827 37.037 0.00 0.00 36.50 2.66
1840 12368 5.371115 TTCTCTTTAAGTTCATTTGGGCG 57.629 39.130 0.00 0.00 0.00 6.13
1845 12373 2.126502 GTTCATTTGGGCGTGCCG 60.127 61.111 4.53 0.00 36.85 5.69
1846 12374 2.281831 TTCATTTGGGCGTGCCGA 60.282 55.556 4.53 0.00 36.85 5.54
1847 12375 1.677300 TTCATTTGGGCGTGCCGAT 60.677 52.632 4.53 0.00 36.85 4.18
1856 12384 1.137513 GGCGTGCCGATTATACTGAC 58.862 55.000 0.00 0.00 0.00 3.51
1873 12401 3.521126 ACTGACTGGATACTTTGGCATCT 59.479 43.478 0.00 0.00 37.61 2.90
1874 12402 3.875727 CTGACTGGATACTTTGGCATCTG 59.124 47.826 0.00 0.00 37.61 2.90
1877 12405 5.121380 ACTGGATACTTTGGCATCTGAAT 57.879 39.130 0.00 0.00 37.61 2.57
1910 12461 6.170506 TGTAGTATTCACATTTGGGTGTCTC 58.829 40.000 0.00 0.00 39.76 3.36
1912 12463 5.248640 AGTATTCACATTTGGGTGTCTCTG 58.751 41.667 0.00 0.00 39.76 3.35
1918 12469 4.633126 CACATTTGGGTGTCTCTGTATGAG 59.367 45.833 0.00 0.00 43.96 2.90
1922 12473 3.239449 TGGGTGTCTCTGTATGAGTTGT 58.761 45.455 0.00 0.00 43.13 3.32
1931 12482 7.614192 TGTCTCTGTATGAGTTGTATACCTTGA 59.386 37.037 0.00 0.00 43.13 3.02
1933 12484 7.614192 TCTCTGTATGAGTTGTATACCTTGACA 59.386 37.037 0.00 0.00 43.13 3.58
1934 12485 8.129496 TCTGTATGAGTTGTATACCTTGACAA 57.871 34.615 0.00 0.00 33.23 3.18
1942 12493 7.360575 GTTGTATACCTTGACAACCTAAGTG 57.639 40.000 6.62 0.00 46.32 3.16
1957 12508 9.582648 ACAACCTAAGTGTTTTATTACCATTCT 57.417 29.630 0.00 0.00 0.00 2.40
2065 12616 3.250816 TGGTAACAGGGACCACACT 57.749 52.632 0.00 0.00 46.17 3.55
2066 12617 1.513858 TGGTAACAGGGACCACACTT 58.486 50.000 0.00 0.00 46.17 3.16
2067 12618 1.847737 TGGTAACAGGGACCACACTTT 59.152 47.619 0.00 0.00 46.17 2.66
2068 12619 2.158726 TGGTAACAGGGACCACACTTTC 60.159 50.000 0.00 0.00 46.17 2.62
2069 12620 2.158726 GGTAACAGGGACCACACTTTCA 60.159 50.000 0.00 0.00 36.91 2.69
2070 12621 2.818751 AACAGGGACCACACTTTCAA 57.181 45.000 0.00 0.00 0.00 2.69
2071 12622 2.052782 ACAGGGACCACACTTTCAAC 57.947 50.000 0.00 0.00 0.00 3.18
2072 12623 0.944386 CAGGGACCACACTTTCAACG 59.056 55.000 0.00 0.00 0.00 4.10
2073 12624 0.544697 AGGGACCACACTTTCAACGT 59.455 50.000 0.00 0.00 0.00 3.99
2074 12625 1.064979 AGGGACCACACTTTCAACGTT 60.065 47.619 0.00 0.00 0.00 3.99
2075 12626 2.171027 AGGGACCACACTTTCAACGTTA 59.829 45.455 0.00 0.00 0.00 3.18
2076 12627 2.288729 GGGACCACACTTTCAACGTTAC 59.711 50.000 0.00 0.00 0.00 2.50
2077 12628 2.937799 GGACCACACTTTCAACGTTACA 59.062 45.455 0.00 0.00 0.00 2.41
2078 12629 3.374678 GGACCACACTTTCAACGTTACAA 59.625 43.478 0.00 0.00 0.00 2.41
2079 12630 4.495184 GGACCACACTTTCAACGTTACAAG 60.495 45.833 14.26 14.26 0.00 3.16
2080 12631 4.004982 ACCACACTTTCAACGTTACAAGT 58.995 39.130 15.30 15.30 0.00 3.16
2081 12632 4.456566 ACCACACTTTCAACGTTACAAGTT 59.543 37.500 17.49 9.56 0.00 2.66
2082 12633 5.025826 CCACACTTTCAACGTTACAAGTTC 58.974 41.667 17.49 0.00 0.00 3.01
2083 12634 5.391097 CCACACTTTCAACGTTACAAGTTCA 60.391 40.000 17.49 0.00 0.00 3.18
2084 12635 6.255215 CACACTTTCAACGTTACAAGTTCAT 58.745 36.000 17.49 7.46 0.00 2.57
2085 12636 7.403421 CACACTTTCAACGTTACAAGTTCATA 58.597 34.615 17.49 0.00 0.00 2.15
2086 12637 7.372396 CACACTTTCAACGTTACAAGTTCATAC 59.628 37.037 17.49 0.00 0.00 2.39
2087 12638 6.849305 CACTTTCAACGTTACAAGTTCATACC 59.151 38.462 17.49 0.00 0.00 2.73
2088 12639 6.539464 ACTTTCAACGTTACAAGTTCATACCA 59.461 34.615 15.30 0.00 0.00 3.25
2089 12640 6.533819 TTCAACGTTACAAGTTCATACCAG 57.466 37.500 0.00 0.00 0.00 4.00
2090 12641 4.992319 TCAACGTTACAAGTTCATACCAGG 59.008 41.667 0.00 0.00 0.00 4.45
2091 12642 3.332034 ACGTTACAAGTTCATACCAGGC 58.668 45.455 0.00 0.00 0.00 4.85
2131 12682 2.551032 CAATGACTGCTGCAAGAGAACA 59.449 45.455 3.02 0.00 34.07 3.18
2144 12695 2.508526 AGAGAACATGCAAGGTTGGAC 58.491 47.619 11.35 3.89 43.10 4.02
2168 12719 0.107214 TTAATTCGCAGGAGCCAGGG 60.107 55.000 0.00 0.00 37.52 4.45
2174 12725 4.559063 CAGGAGCCAGGGGATGCG 62.559 72.222 0.00 0.00 33.81 4.73
2195 12746 0.031178 CACAGGCCAGTGCTTTTGAC 59.969 55.000 16.01 0.00 37.74 3.18
2215 12766 2.149578 CATTGTGGATAGGCTGCTAGC 58.850 52.381 8.10 8.10 41.46 3.42
2225 12776 2.048601 AGGCTGCTAGCAGAAGATGAT 58.951 47.619 41.87 18.78 44.75 2.45
2227 12778 3.006752 AGGCTGCTAGCAGAAGATGATAC 59.993 47.826 41.87 23.03 44.75 2.24
2246 12797 2.693069 ACGGAAGCTTCTCAGACAATG 58.307 47.619 25.05 7.35 0.00 2.82
2250 12801 3.557898 GGAAGCTTCTCAGACAATGACCA 60.558 47.826 25.05 0.00 33.22 4.02
2330 12881 1.989706 TGGCTAAAAGGGTTGACCAC 58.010 50.000 2.12 0.00 43.89 4.16
2332 12883 2.158385 TGGCTAAAAGGGTTGACCACAT 60.158 45.455 2.12 0.00 43.89 3.21
2377 12928 5.690865 TGTTTTTGACTGGTTGGATACTCT 58.309 37.500 0.00 0.00 37.61 3.24
2396 12947 5.014858 ACTCTCAACCTTGATGATTGCATT 58.985 37.500 0.00 0.00 36.46 3.56
2399 12950 5.066893 TCTCAACCTTGATGATTGCATTAGC 59.933 40.000 0.00 0.00 37.69 3.09
2405 12956 5.048504 CCTTGATGATTGCATTAGCGGTAAT 60.049 40.000 13.93 13.93 46.23 1.89
2419 12970 2.163613 GCGGTAATGTTTCCAGGGAAAG 59.836 50.000 13.56 2.23 43.66 2.62
2443 12994 6.015940 AGTCCAAGAGTTCATGTCAAAAATCC 60.016 38.462 0.00 0.00 0.00 3.01
2448 12999 6.752168 AGAGTTCATGTCAAAAATCCTTTGG 58.248 36.000 0.00 0.00 0.00 3.28
2457 13008 4.141041 TCAAAAATCCTTTGGACTCCCAGA 60.141 41.667 0.00 0.00 44.60 3.86
2462 13013 1.407989 CCTTTGGACTCCCAGAGATGC 60.408 57.143 3.86 0.00 44.99 3.91
2473 13024 0.465705 CAGAGATGCGGTGGGTATGT 59.534 55.000 0.00 0.00 0.00 2.29
2486 13037 4.220724 GTGGGTATGTATCAGGTACCAGA 58.779 47.826 15.94 12.74 39.67 3.86
2557 13108 2.687935 TGAAGAAACCAGAACCAGTTGC 59.312 45.455 0.00 0.00 0.00 4.17
2564 13115 1.160137 CAGAACCAGTTGCTGCTACC 58.840 55.000 10.52 0.00 0.00 3.18
2567 13118 0.324943 AACCAGTTGCTGCTACCGAT 59.675 50.000 10.52 0.00 0.00 4.18
2689 13240 3.030291 AGCATGAACACCTGGAAAACAA 58.970 40.909 0.00 0.00 0.00 2.83
2692 13243 4.448732 GCATGAACACCTGGAAAACAATTC 59.551 41.667 0.00 0.00 0.00 2.17
2711 13262 7.548967 ACAATTCGGGAAAAGAAAACAAAGTA 58.451 30.769 0.00 0.00 0.00 2.24
2717 13268 7.013529 CGGGAAAAGAAAACAAAGTAGATACG 58.986 38.462 0.00 0.00 0.00 3.06
2726 13277 7.907214 AAACAAAGTAGATACGATTTGCTCT 57.093 32.000 0.00 0.00 36.36 4.09
2734 13285 7.916450 AGTAGATACGATTTGCTCTGTAAACTC 59.084 37.037 0.00 0.00 0.00 3.01
2792 13343 0.548031 GCTCAGGGGGAATGACATCA 59.452 55.000 0.00 0.00 0.00 3.07
2833 13384 5.546499 AGGTAGACCACATAGAAAGACCAAA 59.454 40.000 0.66 0.00 38.89 3.28
2834 13385 6.215636 AGGTAGACCACATAGAAAGACCAAAT 59.784 38.462 0.66 0.00 38.89 2.32
2860 13411 6.385033 GTGAAAGTTCAATCCCTTTGATGAG 58.615 40.000 0.00 0.00 43.73 2.90
2949 13500 2.498078 GAGAGTCGGGTTTCAAGAGGAT 59.502 50.000 0.00 0.00 0.00 3.24
2993 13544 2.146342 GTAATCATGGGATCTGGTGCG 58.854 52.381 0.00 0.00 31.88 5.34
3189 13741 5.010719 CCAGCAAGCATATTTGATCCTGATT 59.989 40.000 0.00 0.00 0.00 2.57
3195 13747 8.459635 CAAGCATATTTGATCCTGATTCCATAG 58.540 37.037 0.00 0.00 0.00 2.23
3338 13891 4.214437 CACTAAGCGCTGAACTGAAAAAG 58.786 43.478 12.58 0.00 0.00 2.27
3353 13906 6.444633 ACTGAAAAAGCAATCAACATCTGAG 58.555 36.000 0.00 0.00 37.52 3.35
3392 13945 2.883574 TGTTTGGCGAATAGAGTACCG 58.116 47.619 0.00 0.00 0.00 4.02
3417 13970 4.702612 TGAGAGAGTTAAGTAGCACAGAGG 59.297 45.833 0.00 0.00 0.00 3.69
3576 14129 0.387929 GTCCACAGTCCGTGTTCTGA 59.612 55.000 0.00 0.00 44.78 3.27
3636 14189 8.463930 TCAAACAAAGGTAGTTCATTTCATCT 57.536 30.769 0.00 0.00 0.00 2.90
3644 14197 6.318144 AGGTAGTTCATTTCATCTTCTGCATG 59.682 38.462 0.00 0.00 0.00 4.06
3768 14321 5.725362 ACTATTTCAGAGGCTACACACTTC 58.275 41.667 0.00 0.00 0.00 3.01
3810 14363 2.716217 ACAAGGAACATGCTAGAAGCC 58.284 47.619 0.00 0.00 41.51 4.35
4220 14783 4.056050 GGTATGCAACTGGTTATCCTACG 58.944 47.826 0.00 0.00 34.23 3.51
4650 15249 4.437682 TGGTTCTTTCCTCTTGATGTGT 57.562 40.909 0.00 0.00 0.00 3.72
4679 15279 5.003402 GTGTTGCGATAAATTGAACGATTGG 59.997 40.000 0.00 0.00 0.00 3.16
4691 15291 7.961325 ATTGAACGATTGGCAGTTTATTTTT 57.039 28.000 0.00 0.00 0.00 1.94
4737 15339 7.912056 TTTGAAGGTCTTCTAGACATCATTG 57.088 36.000 11.41 0.00 46.79 2.82
4768 15370 9.988815 TTTTTATTAACTTGCCTTTATGCTGAA 57.011 25.926 0.00 0.00 0.00 3.02
4810 15413 1.002430 TGTTGGAGAGGATCACAGTGC 59.998 52.381 0.00 0.00 37.82 4.40
4936 15547 0.314935 CGCCACATGCCTTTTGTTCT 59.685 50.000 0.00 0.00 36.24 3.01
5141 15754 4.524328 AGTTTCTGTTTTATGAAGGGCCAG 59.476 41.667 6.18 0.00 0.00 4.85
5226 15839 3.083997 GAGGTCCGGGCCACTGAT 61.084 66.667 30.48 5.41 0.00 2.90
5236 15849 1.884579 GGGCCACTGATCTGCAATATG 59.115 52.381 4.39 0.00 0.00 1.78
5252 15865 6.175471 TGCAATATGATGAACACTTCACTCT 58.825 36.000 0.00 0.00 43.48 3.24
5319 15933 5.060940 GTGAACACACTTCTTTTTGCAAGTC 59.939 40.000 0.00 0.00 30.06 3.01
5344 15958 1.531149 CGAAACTCAACCTGTTCGCAT 59.469 47.619 0.00 0.00 0.00 4.73
5375 15989 1.807981 TGCCATTACTCGAACGGCG 60.808 57.895 4.80 4.80 46.02 6.46
5389 16003 0.313672 ACGGCGCATGTTGTGAATTT 59.686 45.000 10.83 0.00 0.00 1.82
5396 16010 3.363182 CGCATGTTGTGAATTTTGCTTGG 60.363 43.478 0.00 0.00 0.00 3.61
5397 16011 3.607542 GCATGTTGTGAATTTTGCTTGGC 60.608 43.478 0.00 0.00 0.00 4.52
5409 16023 2.690778 GCTTGGCGATGCTTTCCGT 61.691 57.895 0.00 0.00 0.00 4.69
5439 16053 8.283291 GCTTGGATCGTGTAAGGATTTAATTAG 58.717 37.037 0.00 0.00 42.28 1.73
5456 16070 5.705609 AATTAGGTGGTGAACATGTTGAC 57.294 39.130 17.58 18.16 0.00 3.18
5473 16088 0.322816 GACCATGAAGCAGCAAGGGA 60.323 55.000 0.00 0.00 31.14 4.20
5492 16108 6.161855 AGGGATGTTTTTCCTTCTGTTTTC 57.838 37.500 0.00 0.00 35.97 2.29
5538 16154 0.106769 ACATCCACACACCACAGCAA 60.107 50.000 0.00 0.00 0.00 3.91
5596 16214 3.054361 CCAAGCACCAAGTATTCCCTAGT 60.054 47.826 0.00 0.00 0.00 2.57
5659 16277 4.229582 TCTTATATGCTTTCCCAGGGTGTT 59.770 41.667 5.01 0.00 0.00 3.32
5727 16346 6.662755 AGTGAATGTATGGATCTTAAAGGCA 58.337 36.000 0.00 0.00 0.00 4.75
5728 16347 7.293073 AGTGAATGTATGGATCTTAAAGGCAT 58.707 34.615 0.00 0.00 0.00 4.40
5754 16373 8.877195 TGAGACATTACTTTTTACTACTCCCTT 58.123 33.333 0.00 0.00 0.00 3.95
5761 16380 5.070847 ACTTTTTACTACTCCCTTCGTTCCA 59.929 40.000 0.00 0.00 0.00 3.53
5763 16382 5.549742 TTTACTACTCCCTTCGTTCCAAA 57.450 39.130 0.00 0.00 0.00 3.28
5764 16383 5.549742 TTACTACTCCCTTCGTTCCAAAA 57.450 39.130 0.00 0.00 0.00 2.44
5767 16386 5.731591 ACTACTCCCTTCGTTCCAAAATAG 58.268 41.667 0.00 0.00 0.00 1.73
5768 16387 4.903045 ACTCCCTTCGTTCCAAAATAGA 57.097 40.909 0.00 0.00 0.00 1.98
5769 16388 5.437191 ACTCCCTTCGTTCCAAAATAGAT 57.563 39.130 0.00 0.00 0.00 1.98
5771 16390 5.045869 ACTCCCTTCGTTCCAAAATAGATGA 60.046 40.000 0.00 0.00 0.00 2.92
5773 16392 5.045869 TCCCTTCGTTCCAAAATAGATGACT 60.046 40.000 0.00 0.00 0.00 3.41
5774 16393 5.294552 CCCTTCGTTCCAAAATAGATGACTC 59.705 44.000 0.00 0.00 0.00 3.36
5775 16394 5.874810 CCTTCGTTCCAAAATAGATGACTCA 59.125 40.000 0.00 0.00 0.00 3.41
5776 16395 6.371548 CCTTCGTTCCAAAATAGATGACTCAA 59.628 38.462 0.00 0.00 0.00 3.02
5777 16396 6.721571 TCGTTCCAAAATAGATGACTCAAC 57.278 37.500 0.00 0.00 0.00 3.18
5837 16456 5.419542 TGAGTCATCTATTTTGGAACGGAG 58.580 41.667 0.00 0.00 0.00 4.63
5839 16458 4.469945 AGTCATCTATTTTGGAACGGAGGA 59.530 41.667 0.00 0.00 0.00 3.71
5859 16478 6.101274 AGGAAGTAGAAGGTAAGGTATGGA 57.899 41.667 0.00 0.00 0.00 3.41
5860 16479 5.898397 AGGAAGTAGAAGGTAAGGTATGGAC 59.102 44.000 0.00 0.00 0.00 4.02
5861 16480 5.221204 GGAAGTAGAAGGTAAGGTATGGACG 60.221 48.000 0.00 0.00 0.00 4.79
5862 16481 4.864726 AGTAGAAGGTAAGGTATGGACGT 58.135 43.478 0.00 0.00 0.00 4.34
5863 16482 6.006275 AGTAGAAGGTAAGGTATGGACGTA 57.994 41.667 0.00 0.00 0.00 3.57
5864 16483 6.608922 AGTAGAAGGTAAGGTATGGACGTAT 58.391 40.000 0.00 0.00 0.00 3.06
5865 16484 5.786264 AGAAGGTAAGGTATGGACGTATG 57.214 43.478 0.00 0.00 0.00 2.39
5866 16485 4.587684 AGAAGGTAAGGTATGGACGTATGG 59.412 45.833 0.00 0.00 0.00 2.74
5898 16517 5.864418 TTGTTGATAGGTATAGCTCGGTT 57.136 39.130 7.93 0.00 0.00 4.44
5983 16623 7.739825 TCTACCTTGAATGAGGATAGAATTGG 58.260 38.462 0.00 0.00 39.25 3.16
5984 16624 5.699143 ACCTTGAATGAGGATAGAATTGGG 58.301 41.667 0.00 0.00 39.25 4.12
5992 16632 4.210331 GAGGATAGAATTGGGCATGTGTT 58.790 43.478 0.00 0.00 0.00 3.32
5993 16633 4.613437 AGGATAGAATTGGGCATGTGTTT 58.387 39.130 0.00 0.00 0.00 2.83
6008 16648 5.061311 GCATGTGTTTAGAACAATGCATGTC 59.939 40.000 21.78 0.00 45.06 3.06
6024 16664 2.672961 TGTCGATTAGAGCAGTTGGG 57.327 50.000 0.00 0.00 0.00 4.12
6025 16665 1.291132 GTCGATTAGAGCAGTTGGGC 58.709 55.000 0.00 0.00 0.00 5.36
6026 16666 0.179111 TCGATTAGAGCAGTTGGGCG 60.179 55.000 0.00 0.00 39.27 6.13
6027 16667 0.460284 CGATTAGAGCAGTTGGGCGT 60.460 55.000 0.00 0.00 39.27 5.68
6028 16668 1.739067 GATTAGAGCAGTTGGGCGTT 58.261 50.000 0.00 0.00 39.27 4.84
6029 16669 1.398390 GATTAGAGCAGTTGGGCGTTG 59.602 52.381 0.00 0.00 39.27 4.10
6030 16670 1.234615 TTAGAGCAGTTGGGCGTTGC 61.235 55.000 0.00 0.00 39.27 4.17
6031 16671 2.390306 TAGAGCAGTTGGGCGTTGCA 62.390 55.000 0.00 0.00 40.22 4.08
6032 16672 2.832661 AGCAGTTGGGCGTTGCAA 60.833 55.556 0.00 0.00 40.22 4.08
6033 16673 2.658268 GCAGTTGGGCGTTGCAAC 60.658 61.111 19.89 19.89 37.75 4.17
6034 16674 2.027460 CAGTTGGGCGTTGCAACC 59.973 61.111 23.42 15.51 0.00 3.77
6039 16679 3.977244 GGGCGTTGCAACCCACTG 61.977 66.667 27.64 15.40 46.22 3.66
6040 16680 3.977244 GGCGTTGCAACCCACTGG 61.977 66.667 23.42 9.58 37.80 4.00
6051 16691 2.825836 CCACTGGGAATGCGAGGC 60.826 66.667 0.00 0.00 35.59 4.70
6052 16692 2.046023 CACTGGGAATGCGAGGCA 60.046 61.111 0.00 0.00 44.86 4.75
6061 16701 4.301505 TGCGAGGCATTGAGGAAC 57.698 55.556 0.00 0.00 31.71 3.62
6062 16702 1.374568 TGCGAGGCATTGAGGAACA 59.625 52.632 0.00 0.00 31.71 3.18
6063 16703 0.955428 TGCGAGGCATTGAGGAACAC 60.955 55.000 0.00 0.00 31.71 3.32
6064 16704 0.955428 GCGAGGCATTGAGGAACACA 60.955 55.000 0.00 0.00 0.00 3.72
6065 16705 1.742761 CGAGGCATTGAGGAACACAT 58.257 50.000 0.00 0.00 0.00 3.21
6066 16706 1.667724 CGAGGCATTGAGGAACACATC 59.332 52.381 0.00 0.00 0.00 3.06
6076 16716 0.603065 GGAACACATCCCTTGTTGCC 59.397 55.000 0.00 0.00 43.00 4.52
6077 16717 1.327303 GAACACATCCCTTGTTGCCA 58.673 50.000 0.00 0.00 37.31 4.92
6078 16718 1.000274 GAACACATCCCTTGTTGCCAC 60.000 52.381 0.00 0.00 37.31 5.01
6079 16719 0.827507 ACACATCCCTTGTTGCCACC 60.828 55.000 0.00 0.00 36.00 4.61
6080 16720 0.827089 CACATCCCTTGTTGCCACCA 60.827 55.000 0.00 0.00 36.00 4.17
6081 16721 0.105760 ACATCCCTTGTTGCCACCAA 60.106 50.000 0.00 0.00 33.74 3.67
6090 16730 1.153745 TTGCCACCAACAACAACGC 60.154 52.632 0.00 0.00 0.00 4.84
6091 16731 1.599606 TTGCCACCAACAACAACGCT 61.600 50.000 0.00 0.00 0.00 5.07
6092 16732 1.140804 GCCACCAACAACAACGCTT 59.859 52.632 0.00 0.00 0.00 4.68
6093 16733 0.869880 GCCACCAACAACAACGCTTC 60.870 55.000 0.00 0.00 0.00 3.86
6094 16734 0.738389 CCACCAACAACAACGCTTCT 59.262 50.000 0.00 0.00 0.00 2.85
6095 16735 1.268539 CCACCAACAACAACGCTTCTC 60.269 52.381 0.00 0.00 0.00 2.87
6096 16736 1.021968 ACCAACAACAACGCTTCTCC 58.978 50.000 0.00 0.00 0.00 3.71
6097 16737 0.041312 CCAACAACAACGCTTCTCCG 60.041 55.000 0.00 0.00 0.00 4.63
6098 16738 0.041312 CAACAACAACGCTTCTCCGG 60.041 55.000 0.00 0.00 0.00 5.14
6099 16739 0.463116 AACAACAACGCTTCTCCGGT 60.463 50.000 0.00 0.00 0.00 5.28
6100 16740 0.463116 ACAACAACGCTTCTCCGGTT 60.463 50.000 0.00 0.00 0.00 4.44
6101 16741 1.202557 ACAACAACGCTTCTCCGGTTA 60.203 47.619 0.00 0.00 0.00 2.85
6102 16742 1.459592 CAACAACGCTTCTCCGGTTAG 59.540 52.381 0.00 0.00 0.00 2.34
6103 16743 0.677842 ACAACGCTTCTCCGGTTAGT 59.322 50.000 0.00 0.00 0.00 2.24
6104 16744 1.068474 CAACGCTTCTCCGGTTAGTG 58.932 55.000 0.00 6.79 0.00 2.74
6105 16745 0.669625 AACGCTTCTCCGGTTAGTGC 60.670 55.000 0.00 1.33 0.00 4.40
6106 16746 1.080093 CGCTTCTCCGGTTAGTGCA 60.080 57.895 0.00 0.00 0.00 4.57
6107 16747 0.460284 CGCTTCTCCGGTTAGTGCAT 60.460 55.000 0.00 0.00 0.00 3.96
6108 16748 1.739067 GCTTCTCCGGTTAGTGCATT 58.261 50.000 0.00 0.00 0.00 3.56
6109 16749 1.398390 GCTTCTCCGGTTAGTGCATTG 59.602 52.381 0.00 0.00 0.00 2.82
6110 16750 1.398390 CTTCTCCGGTTAGTGCATTGC 59.602 52.381 0.00 0.46 0.00 3.56
6111 16751 0.323302 TCTCCGGTTAGTGCATTGCA 59.677 50.000 7.38 7.38 35.60 4.08
6112 16752 1.065491 TCTCCGGTTAGTGCATTGCAT 60.065 47.619 15.49 6.70 41.91 3.96
6113 16753 2.169561 TCTCCGGTTAGTGCATTGCATA 59.830 45.455 15.49 5.74 41.91 3.14
6114 16754 2.285083 TCCGGTTAGTGCATTGCATAC 58.715 47.619 15.49 12.73 41.91 2.39
6115 16755 1.333619 CCGGTTAGTGCATTGCATACC 59.666 52.381 15.49 19.22 41.91 2.73
6116 16756 2.013400 CGGTTAGTGCATTGCATACCA 58.987 47.619 26.29 9.57 41.91 3.25
6117 16757 2.618241 CGGTTAGTGCATTGCATACCAT 59.382 45.455 26.29 12.07 41.91 3.55
6118 16758 3.548616 CGGTTAGTGCATTGCATACCATG 60.549 47.826 26.29 15.25 41.91 3.66
6119 16759 3.631686 GGTTAGTGCATTGCATACCATGA 59.368 43.478 24.06 5.25 41.91 3.07
6120 16760 4.261322 GGTTAGTGCATTGCATACCATGAG 60.261 45.833 24.06 0.00 41.91 2.90
6121 16761 3.286329 AGTGCATTGCATACCATGAGA 57.714 42.857 15.49 0.00 41.91 3.27
6122 16762 3.211865 AGTGCATTGCATACCATGAGAG 58.788 45.455 15.49 0.00 41.91 3.20
6123 16763 3.118149 AGTGCATTGCATACCATGAGAGA 60.118 43.478 15.49 0.00 41.91 3.10
6124 16764 3.628942 GTGCATTGCATACCATGAGAGAA 59.371 43.478 15.49 0.00 41.91 2.87
6125 16765 3.628942 TGCATTGCATACCATGAGAGAAC 59.371 43.478 7.38 0.00 31.71 3.01
6126 16766 3.881688 GCATTGCATACCATGAGAGAACT 59.118 43.478 3.15 0.00 0.00 3.01
6127 16767 4.261072 GCATTGCATACCATGAGAGAACTG 60.261 45.833 3.15 0.00 0.00 3.16
6128 16768 4.824479 TTGCATACCATGAGAGAACTGA 57.176 40.909 0.00 0.00 0.00 3.41
6129 16769 4.824479 TGCATACCATGAGAGAACTGAA 57.176 40.909 0.00 0.00 0.00 3.02
6130 16770 5.363562 TGCATACCATGAGAGAACTGAAT 57.636 39.130 0.00 0.00 0.00 2.57
6131 16771 5.121105 TGCATACCATGAGAGAACTGAATG 58.879 41.667 0.00 0.00 0.00 2.67
6132 16772 4.514441 GCATACCATGAGAGAACTGAATGG 59.486 45.833 0.00 0.00 40.22 3.16
6133 16773 3.641434 ACCATGAGAGAACTGAATGGG 57.359 47.619 0.00 0.00 39.42 4.00
6134 16774 3.184628 ACCATGAGAGAACTGAATGGGA 58.815 45.455 0.00 0.00 39.42 4.37
6135 16775 3.588842 ACCATGAGAGAACTGAATGGGAA 59.411 43.478 0.00 0.00 39.42 3.97
6136 16776 4.043310 ACCATGAGAGAACTGAATGGGAAA 59.957 41.667 0.00 0.00 39.42 3.13
6137 16777 4.639310 CCATGAGAGAACTGAATGGGAAAG 59.361 45.833 0.00 0.00 35.23 2.62
6138 16778 4.292186 TGAGAGAACTGAATGGGAAAGG 57.708 45.455 0.00 0.00 0.00 3.11
6139 16779 3.013219 GAGAGAACTGAATGGGAAAGGC 58.987 50.000 0.00 0.00 0.00 4.35
6140 16780 2.095461 GAGAACTGAATGGGAAAGGCC 58.905 52.381 0.00 0.00 0.00 5.19
6141 16781 0.811281 GAACTGAATGGGAAAGGCCG 59.189 55.000 0.00 0.00 37.63 6.13
6142 16782 0.112412 AACTGAATGGGAAAGGCCGT 59.888 50.000 0.00 0.00 37.63 5.68
6143 16783 0.112412 ACTGAATGGGAAAGGCCGTT 59.888 50.000 2.60 2.60 37.63 4.44
6144 16784 1.256812 CTGAATGGGAAAGGCCGTTT 58.743 50.000 5.09 2.43 37.63 3.60
6145 16785 0.965439 TGAATGGGAAAGGCCGTTTG 59.035 50.000 5.09 0.00 37.63 2.93
6146 16786 0.246360 GAATGGGAAAGGCCGTTTGG 59.754 55.000 5.09 0.00 37.63 3.28
6147 16787 0.178947 AATGGGAAAGGCCGTTTGGA 60.179 50.000 5.09 0.00 37.49 3.53
6148 16788 0.041090 ATGGGAAAGGCCGTTTGGAT 59.959 50.000 5.09 0.00 37.49 3.41
6149 16789 0.897863 TGGGAAAGGCCGTTTGGATG 60.898 55.000 5.09 0.00 37.49 3.51
6150 16790 0.898326 GGGAAAGGCCGTTTGGATGT 60.898 55.000 5.09 0.00 37.49 3.06
6151 16791 0.966179 GGAAAGGCCGTTTGGATGTT 59.034 50.000 5.09 0.00 37.49 2.71
6152 16792 1.336795 GGAAAGGCCGTTTGGATGTTG 60.337 52.381 5.09 0.00 37.49 3.33
6153 16793 0.678950 AAAGGCCGTTTGGATGTTGG 59.321 50.000 0.00 0.00 37.49 3.77
6154 16794 0.178975 AAGGCCGTTTGGATGTTGGA 60.179 50.000 0.00 0.00 37.49 3.53
6155 16795 0.609131 AGGCCGTTTGGATGTTGGAG 60.609 55.000 0.00 0.00 37.49 3.86
6156 16796 0.608035 GGCCGTTTGGATGTTGGAGA 60.608 55.000 0.00 0.00 37.49 3.71
6157 16797 1.463674 GCCGTTTGGATGTTGGAGAT 58.536 50.000 0.00 0.00 37.49 2.75
6158 16798 1.133025 GCCGTTTGGATGTTGGAGATG 59.867 52.381 0.00 0.00 37.49 2.90
6159 16799 2.710377 CCGTTTGGATGTTGGAGATGA 58.290 47.619 0.00 0.00 37.49 2.92
6160 16800 2.679837 CCGTTTGGATGTTGGAGATGAG 59.320 50.000 0.00 0.00 37.49 2.90
6161 16801 2.096496 CGTTTGGATGTTGGAGATGAGC 59.904 50.000 0.00 0.00 0.00 4.26
6162 16802 3.084039 GTTTGGATGTTGGAGATGAGCA 58.916 45.455 0.00 0.00 0.00 4.26
6163 16803 3.438216 TTGGATGTTGGAGATGAGCAA 57.562 42.857 0.00 0.00 0.00 3.91
6164 16804 2.995283 TGGATGTTGGAGATGAGCAAG 58.005 47.619 0.00 0.00 0.00 4.01
6165 16805 2.573009 TGGATGTTGGAGATGAGCAAGA 59.427 45.455 0.00 0.00 0.00 3.02
6166 16806 2.941720 GGATGTTGGAGATGAGCAAGAC 59.058 50.000 0.00 0.00 0.00 3.01
6167 16807 3.603532 GATGTTGGAGATGAGCAAGACA 58.396 45.455 0.00 0.00 0.00 3.41
6168 16808 2.771089 TGTTGGAGATGAGCAAGACAC 58.229 47.619 0.00 0.00 0.00 3.67
6169 16809 2.104622 TGTTGGAGATGAGCAAGACACA 59.895 45.455 0.00 0.00 0.00 3.72
6170 16810 3.141398 GTTGGAGATGAGCAAGACACAA 58.859 45.455 0.00 0.00 0.00 3.33
6171 16811 3.490439 TGGAGATGAGCAAGACACAAA 57.510 42.857 0.00 0.00 0.00 2.83
6172 16812 4.025040 TGGAGATGAGCAAGACACAAAT 57.975 40.909 0.00 0.00 0.00 2.32
6173 16813 3.754850 TGGAGATGAGCAAGACACAAATG 59.245 43.478 0.00 0.00 0.00 2.32
6174 16814 3.755378 GGAGATGAGCAAGACACAAATGT 59.245 43.478 0.00 0.00 43.71 2.71
6175 16815 4.217118 GGAGATGAGCAAGACACAAATGTT 59.783 41.667 0.00 0.00 39.95 2.71
6176 16816 5.412594 GGAGATGAGCAAGACACAAATGTTA 59.587 40.000 0.00 0.00 39.95 2.41
6177 16817 6.246420 AGATGAGCAAGACACAAATGTTAC 57.754 37.500 0.00 0.00 39.95 2.50
6178 16818 4.466567 TGAGCAAGACACAAATGTTACG 57.533 40.909 0.00 0.00 39.95 3.18
6179 16819 3.249799 TGAGCAAGACACAAATGTTACGG 59.750 43.478 0.00 0.00 39.95 4.02
6180 16820 3.472652 AGCAAGACACAAATGTTACGGA 58.527 40.909 0.00 0.00 39.95 4.69
6181 16821 4.072131 AGCAAGACACAAATGTTACGGAT 58.928 39.130 0.00 0.00 39.95 4.18
6182 16822 4.518970 AGCAAGACACAAATGTTACGGATT 59.481 37.500 0.00 0.00 39.95 3.01
6183 16823 5.009610 AGCAAGACACAAATGTTACGGATTT 59.990 36.000 0.00 0.00 39.95 2.17
6184 16824 6.205853 AGCAAGACACAAATGTTACGGATTTA 59.794 34.615 0.00 0.00 39.95 1.40
6185 16825 7.027161 GCAAGACACAAATGTTACGGATTTAT 58.973 34.615 0.00 0.00 39.95 1.40
6186 16826 8.178964 GCAAGACACAAATGTTACGGATTTATA 58.821 33.333 0.00 0.00 39.95 0.98
6187 16827 9.485591 CAAGACACAAATGTTACGGATTTATAC 57.514 33.333 0.00 0.00 39.95 1.47
6188 16828 9.444600 AAGACACAAATGTTACGGATTTATACT 57.555 29.630 0.00 0.00 39.95 2.12
6189 16829 9.444600 AGACACAAATGTTACGGATTTATACTT 57.555 29.630 0.00 0.00 39.95 2.24
6190 16830 9.485591 GACACAAATGTTACGGATTTATACTTG 57.514 33.333 0.00 0.00 39.95 3.16
6191 16831 9.221933 ACACAAATGTTACGGATTTATACTTGA 57.778 29.630 0.00 0.00 34.46 3.02
6192 16832 9.702726 CACAAATGTTACGGATTTATACTTGAG 57.297 33.333 0.00 0.00 0.00 3.02
6193 16833 8.889717 ACAAATGTTACGGATTTATACTTGAGG 58.110 33.333 0.00 0.00 0.00 3.86
6194 16834 9.104965 CAAATGTTACGGATTTATACTTGAGGA 57.895 33.333 0.00 0.00 0.00 3.71
6195 16835 9.847224 AAATGTTACGGATTTATACTTGAGGAT 57.153 29.630 0.00 0.00 0.00 3.24
6198 16838 9.976511 TGTTACGGATTTATACTTGAGGATAAG 57.023 33.333 0.00 0.00 0.00 1.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
96 3697 2.878406 TGCACCAGACTTAGCAAACTTC 59.122 45.455 0.00 0.00 33.48 3.01
99 3700 1.946768 TGTGCACCAGACTTAGCAAAC 59.053 47.619 15.69 0.00 38.91 2.93
147 3749 5.648092 ACACACATTTTAAGCTACCCTCATC 59.352 40.000 0.00 0.00 0.00 2.92
148 3750 5.570320 ACACACATTTTAAGCTACCCTCAT 58.430 37.500 0.00 0.00 0.00 2.90
151 3753 6.514376 CGAAAACACACATTTTAAGCTACCCT 60.514 38.462 0.00 0.00 31.90 4.34
171 3780 2.733945 GCCTTGCCTTGGCGAAAA 59.266 55.556 7.18 0.00 41.03 2.29
183 3792 8.812513 TCTTAATAATATCCATCCATGCCTTG 57.187 34.615 0.00 0.00 0.00 3.61
281 3890 9.696917 GAACTAACATCCAGAACAAATGAAATT 57.303 29.630 0.00 0.00 38.98 1.82
287 3896 5.556915 TCCGAACTAACATCCAGAACAAAT 58.443 37.500 0.00 0.00 0.00 2.32
291 3900 5.642063 TGAAATCCGAACTAACATCCAGAAC 59.358 40.000 0.00 0.00 0.00 3.01
296 3905 7.962964 TCATATGAAATCCGAACTAACATCC 57.037 36.000 1.98 0.00 0.00 3.51
306 3915 6.950842 AGCTATCCATTCATATGAAATCCGA 58.049 36.000 21.50 13.95 37.61 4.55
370 10616 4.398431 AGGCAACCCGACCTTTATAAGGA 61.398 47.826 12.21 0.00 43.42 3.36
416 10662 4.571176 GCCACTAGGACTAACATGTTTAGC 59.429 45.833 17.78 6.09 36.89 3.09
422 10668 3.627395 TTGGCCACTAGGACTAACATG 57.373 47.619 3.88 0.00 46.30 3.21
431 10677 2.771943 TCTATCTGGTTTGGCCACTAGG 59.228 50.000 3.88 0.00 43.61 3.02
457 10726 6.412142 GCCCCACCCATCTATCTATCTATCTA 60.412 46.154 0.00 0.00 0.00 1.98
461 10730 3.627492 CGCCCCACCCATCTATCTATCTA 60.627 52.174 0.00 0.00 0.00 1.98
465 10734 0.544357 CCGCCCCACCCATCTATCTA 60.544 60.000 0.00 0.00 0.00 1.98
466 10735 1.843376 CCGCCCCACCCATCTATCT 60.843 63.158 0.00 0.00 0.00 1.98
467 10736 0.834687 TACCGCCCCACCCATCTATC 60.835 60.000 0.00 0.00 0.00 2.08
468 10737 0.178873 ATACCGCCCCACCCATCTAT 60.179 55.000 0.00 0.00 0.00 1.98
470 10739 2.039831 ATACCGCCCCACCCATCT 60.040 61.111 0.00 0.00 0.00 2.90
478 10749 0.035458 CCTCTCATTCATACCGCCCC 59.965 60.000 0.00 0.00 0.00 5.80
499 10770 8.506168 TTGTCAGAGATAAATTGTTCCCATAC 57.494 34.615 0.00 0.00 0.00 2.39
519 10790 1.207089 CTACATTCGGCCTCCTTGTCA 59.793 52.381 0.00 0.00 0.00 3.58
520 10791 1.941325 CTACATTCGGCCTCCTTGTC 58.059 55.000 0.00 0.00 0.00 3.18
525 10796 0.178068 TCTTGCTACATTCGGCCTCC 59.822 55.000 0.00 0.00 0.00 4.30
531 10802 5.536554 ACTGTTGAATCTTGCTACATTCG 57.463 39.130 0.00 0.00 32.49 3.34
551 10822 3.694566 GTCCTTGTGTCCTCAACAAAACT 59.305 43.478 0.00 0.00 40.31 2.66
567 10838 1.070175 CGCGTTGTAGGTTTGTCCTTG 60.070 52.381 0.00 0.00 45.67 3.61
576 10847 1.593296 GAGGACTCCGCGTTGTAGGT 61.593 60.000 4.92 0.00 0.00 3.08
614 10885 3.493873 CCATGAAAGAGATGAGCCGATCA 60.494 47.826 0.00 0.00 43.70 2.92
653 10924 3.052036 CAACGATTTGAACCAAGCCAAG 58.948 45.455 0.00 0.00 34.24 3.61
668 10939 0.881118 AAAATGCGAGCACCAACGAT 59.119 45.000 0.00 0.00 0.00 3.73
689 10960 7.705325 TCGCCTAAAAGTCTGAGATACATTTAC 59.295 37.037 0.00 0.00 0.00 2.01
695 10966 5.593010 ACATCGCCTAAAAGTCTGAGATAC 58.407 41.667 0.00 0.00 0.00 2.24
704 10975 3.395639 TGAACGAACATCGCCTAAAAGT 58.604 40.909 0.00 0.00 45.12 2.66
732 11003 1.534595 GTAGTCGGTGAAGACGTCTGT 59.465 52.381 20.85 9.42 45.26 3.41
733 11004 1.534163 TGTAGTCGGTGAAGACGTCTG 59.466 52.381 20.85 6.14 45.26 3.51
742 11013 0.520404 GACGCTTCTGTAGTCGGTGA 59.480 55.000 0.00 0.00 0.00 4.02
744 11015 0.522180 CAGACGCTTCTGTAGTCGGT 59.478 55.000 11.91 0.00 43.95 4.69
745 11016 3.314339 CAGACGCTTCTGTAGTCGG 57.686 57.895 11.91 0.00 43.95 4.79
770 11041 7.608376 TGGTACATCATTTTAAGACCGATGAAA 59.392 33.333 11.92 1.24 37.49 2.69
807 11162 3.191581 ACTTCGTGAGATGGTCTGTACAG 59.808 47.826 17.17 17.17 41.60 2.74
817 11172 5.344933 TGTGTTCGATTAACTTCGTGAGATG 59.655 40.000 0.00 0.00 40.03 2.90
829 11184 4.460731 TCCCAAATGCATGTGTTCGATTAA 59.539 37.500 15.77 0.00 0.00 1.40
849 11230 6.823497 TGTTGCTATTACCTAGTACAATCCC 58.177 40.000 0.00 0.00 0.00 3.85
867 11248 6.239289 CGGGGGATAAATAATGAAATGTTGCT 60.239 38.462 0.00 0.00 0.00 3.91
869 11250 5.925969 GCGGGGGATAAATAATGAAATGTTG 59.074 40.000 0.00 0.00 0.00 3.33
924 11308 2.858745 TGCCTTTGGTGGAGTTTCTAC 58.141 47.619 0.00 0.00 0.00 2.59
957 11341 2.223433 GGAGCGAAAATGATCCTGCTTG 60.223 50.000 0.00 0.00 41.25 4.01
958 11342 2.019984 GGAGCGAAAATGATCCTGCTT 58.980 47.619 0.00 0.00 41.25 3.91
963 11347 4.701956 TCTTTTGGAGCGAAAATGATCC 57.298 40.909 0.00 0.00 44.73 3.36
1076 11497 4.179599 GAGGGGAGGAGGGGAGGG 62.180 77.778 0.00 0.00 0.00 4.30
1077 11498 4.179599 GGAGGGGAGGAGGGGAGG 62.180 77.778 0.00 0.00 0.00 4.30
1078 11499 4.179599 GGGAGGGGAGGAGGGGAG 62.180 77.778 0.00 0.00 0.00 4.30
1079 11500 4.761304 AGGGAGGGGAGGAGGGGA 62.761 72.222 0.00 0.00 0.00 4.81
1082 11503 4.179599 GGGAGGGAGGGGAGGAGG 62.180 77.778 0.00 0.00 0.00 4.30
1084 11505 3.036959 GAGGGAGGGAGGGGAGGA 61.037 72.222 0.00 0.00 0.00 3.71
1237 11671 3.733344 TAGCAGGGAACGCGATGCC 62.733 63.158 19.29 19.29 39.51 4.40
1238 11672 2.202878 TAGCAGGGAACGCGATGC 60.203 61.111 15.93 14.56 38.97 3.91
1296 11744 1.137086 ACCAATCGTCGGATGGAGAAG 59.863 52.381 19.73 0.00 31.83 2.85
1362 11811 2.687700 ATTTCTCGACAGCAGCAGAT 57.312 45.000 0.00 0.00 0.00 2.90
1363 11812 2.462456 AATTTCTCGACAGCAGCAGA 57.538 45.000 0.00 0.00 0.00 4.26
1364 11813 2.473540 CGAAATTTCTCGACAGCAGCAG 60.474 50.000 15.92 0.00 41.44 4.24
1366 11815 1.461127 ACGAAATTTCTCGACAGCAGC 59.539 47.619 15.92 0.00 41.44 5.25
1367 11816 2.723010 GCACGAAATTTCTCGACAGCAG 60.723 50.000 15.92 0.11 41.44 4.24
1371 11839 1.194547 GCAGCACGAAATTTCTCGACA 59.805 47.619 15.92 0.00 41.44 4.35
1407 11875 0.389817 TGAGGAACATGGCGACTTCG 60.390 55.000 0.00 0.00 43.27 3.79
1435 11903 1.045407 CTATTCCCGGACCCGAATCA 58.955 55.000 10.42 0.00 42.83 2.57
1442 11910 2.249139 ACTAGCATCTATTCCCGGACC 58.751 52.381 0.73 0.00 0.00 4.46
1443 11911 3.612004 CGAACTAGCATCTATTCCCGGAC 60.612 52.174 0.73 0.00 0.00 4.79
1464 11932 0.876342 GGGGCGCAGAGAGTAAATCG 60.876 60.000 10.83 0.00 0.00 3.34
1489 11957 1.741401 CTTCACAGCGCGGATTGGA 60.741 57.895 16.26 3.23 0.00 3.53
1491 11959 1.699656 CTCCTTCACAGCGCGGATTG 61.700 60.000 16.26 3.19 0.00 2.67
1501 11969 1.123861 AGCAGCAGTCCTCCTTCACA 61.124 55.000 0.00 0.00 0.00 3.58
1505 11973 1.577736 ACATAGCAGCAGTCCTCCTT 58.422 50.000 0.00 0.00 0.00 3.36
1508 11976 2.167281 TCTGAACATAGCAGCAGTCCTC 59.833 50.000 0.00 0.00 33.45 3.71
1516 11987 5.574891 AGTGTCTAGTCTGAACATAGCAG 57.425 43.478 0.00 0.00 34.71 4.24
1521 11992 8.298729 TCATTGATAGTGTCTAGTCTGAACAT 57.701 34.615 0.00 0.00 0.00 2.71
1526 11997 6.389830 AGCTCATTGATAGTGTCTAGTCTG 57.610 41.667 0.00 0.00 0.00 3.51
1527 11998 7.123397 TGAAAGCTCATTGATAGTGTCTAGTCT 59.877 37.037 0.00 0.00 0.00 3.24
1528 11999 7.261325 TGAAAGCTCATTGATAGTGTCTAGTC 58.739 38.462 0.00 0.00 0.00 2.59
1529 12000 7.093552 ACTGAAAGCTCATTGATAGTGTCTAGT 60.094 37.037 0.00 0.00 37.60 2.57
1530 12001 7.264221 ACTGAAAGCTCATTGATAGTGTCTAG 58.736 38.462 0.00 0.00 37.60 2.43
1531 12002 7.093771 TGACTGAAAGCTCATTGATAGTGTCTA 60.094 37.037 0.00 0.00 37.60 2.59
1532 12003 6.047511 ACTGAAAGCTCATTGATAGTGTCT 57.952 37.500 0.00 0.00 37.60 3.41
1533 12004 5.871524 TGACTGAAAGCTCATTGATAGTGTC 59.128 40.000 0.00 0.00 37.60 3.67
1535 12006 6.315642 ACATGACTGAAAGCTCATTGATAGTG 59.684 38.462 0.00 0.00 37.60 2.74
1536 12007 6.315642 CACATGACTGAAAGCTCATTGATAGT 59.684 38.462 0.00 0.00 37.60 2.12
1537 12008 6.537660 TCACATGACTGAAAGCTCATTGATAG 59.462 38.462 0.00 0.00 37.60 2.08
1545 12053 2.745821 TGCATCACATGACTGAAAGCTC 59.254 45.455 0.00 0.00 37.60 4.09
1552 12060 6.293462 CCTTTCAGATATGCATCACATGACTG 60.293 42.308 0.19 4.14 40.06 3.51
1577 12086 1.619807 TTAGGCGGCCACTAAGGTCC 61.620 60.000 23.09 0.00 39.53 4.46
1580 12089 0.035820 TGTTTAGGCGGCCACTAAGG 60.036 55.000 23.09 0.00 41.84 2.69
1590 12099 2.680841 TGGATTTCGGATTGTTTAGGCG 59.319 45.455 0.00 0.00 0.00 5.52
1599 12108 6.942005 TGCATCTATATTGTGGATTTCGGATT 59.058 34.615 0.00 0.00 0.00 3.01
1614 12123 8.272545 ACGCATATCACAATTTGCATCTATAT 57.727 30.769 0.00 0.00 39.11 0.86
1629 12138 4.031652 GGCACAAATGAAAACGCATATCAC 59.968 41.667 0.00 0.00 0.00 3.06
1652 12162 5.406780 GTCAGGTTCAGATTAGTCAGTGTTG 59.593 44.000 0.00 0.00 0.00 3.33
1770 12298 0.533531 TGTGCTGACTGCTGAGTTGG 60.534 55.000 5.87 0.00 43.37 3.77
1790 12318 2.069273 ACACAGCGAATGTAAGTGAGC 58.931 47.619 0.00 0.00 41.41 4.26
1795 12323 4.242475 TGTAGGAACACAGCGAATGTAAG 58.758 43.478 0.00 0.00 41.41 2.34
1804 12332 6.651225 ACTTAAAGAGAATGTAGGAACACAGC 59.349 38.462 0.00 0.00 38.78 4.40
1805 12333 8.608844 AACTTAAAGAGAATGTAGGAACACAG 57.391 34.615 0.00 0.00 38.78 3.66
1840 12368 3.728076 TCCAGTCAGTATAATCGGCAC 57.272 47.619 0.00 0.00 0.00 5.01
1845 12373 7.217200 TGCCAAAGTATCCAGTCAGTATAATC 58.783 38.462 0.00 0.00 0.00 1.75
1846 12374 7.136822 TGCCAAAGTATCCAGTCAGTATAAT 57.863 36.000 0.00 0.00 0.00 1.28
1847 12375 6.553953 TGCCAAAGTATCCAGTCAGTATAA 57.446 37.500 0.00 0.00 0.00 0.98
1856 12384 7.230108 ACATAATTCAGATGCCAAAGTATCCAG 59.770 37.037 0.00 0.00 35.85 3.86
1873 12401 8.785329 TGTGAATACTACAGCAACATAATTCA 57.215 30.769 0.00 0.00 31.59 2.57
1877 12405 8.458052 CCAAATGTGAATACTACAGCAACATAA 58.542 33.333 0.00 0.00 0.00 1.90
1931 12482 9.582648 AGAATGGTAATAAAACACTTAGGTTGT 57.417 29.630 0.00 0.00 0.00 3.32
1975 12526 5.009310 GGAACGGAACTGGTACTGAAATTTT 59.991 40.000 0.00 0.00 0.00 1.82
2058 12609 4.004982 ACTTGTAACGTTGAAAGTGTGGT 58.995 39.130 22.26 5.60 31.82 4.16
2059 12610 4.609691 ACTTGTAACGTTGAAAGTGTGG 57.390 40.909 22.26 5.11 31.82 4.17
2060 12611 5.623335 TGAACTTGTAACGTTGAAAGTGTG 58.377 37.500 23.11 5.96 33.30 3.82
2061 12612 5.866335 TGAACTTGTAACGTTGAAAGTGT 57.134 34.783 23.11 15.94 33.30 3.55
2062 12613 6.849305 GGTATGAACTTGTAACGTTGAAAGTG 59.151 38.462 23.11 8.19 33.30 3.16
2063 12614 6.539464 TGGTATGAACTTGTAACGTTGAAAGT 59.461 34.615 19.10 19.10 34.40 2.66
2064 12615 6.950545 TGGTATGAACTTGTAACGTTGAAAG 58.049 36.000 11.99 15.88 0.00 2.62
2065 12616 6.017770 CCTGGTATGAACTTGTAACGTTGAAA 60.018 38.462 11.99 4.18 0.00 2.69
2066 12617 5.467399 CCTGGTATGAACTTGTAACGTTGAA 59.533 40.000 11.99 2.67 0.00 2.69
2067 12618 4.992319 CCTGGTATGAACTTGTAACGTTGA 59.008 41.667 11.99 0.00 0.00 3.18
2068 12619 4.378046 GCCTGGTATGAACTTGTAACGTTG 60.378 45.833 11.99 0.00 0.00 4.10
2069 12620 3.749609 GCCTGGTATGAACTTGTAACGTT 59.250 43.478 5.88 5.88 0.00 3.99
2070 12621 3.244284 TGCCTGGTATGAACTTGTAACGT 60.244 43.478 0.00 0.00 0.00 3.99
2071 12622 3.124636 GTGCCTGGTATGAACTTGTAACG 59.875 47.826 0.00 0.00 0.00 3.18
2072 12623 4.324267 AGTGCCTGGTATGAACTTGTAAC 58.676 43.478 0.00 0.00 0.00 2.50
2073 12624 4.634012 AGTGCCTGGTATGAACTTGTAA 57.366 40.909 0.00 0.00 0.00 2.41
2074 12625 4.323417 CAAGTGCCTGGTATGAACTTGTA 58.677 43.478 14.53 0.00 41.67 2.41
2075 12626 3.149196 CAAGTGCCTGGTATGAACTTGT 58.851 45.455 14.53 0.00 41.67 3.16
2076 12627 2.095059 GCAAGTGCCTGGTATGAACTTG 60.095 50.000 16.70 16.70 46.66 3.16
2077 12628 2.162681 GCAAGTGCCTGGTATGAACTT 58.837 47.619 0.00 0.00 34.31 2.66
2078 12629 1.352352 AGCAAGTGCCTGGTATGAACT 59.648 47.619 0.00 0.00 43.38 3.01
2079 12630 1.826385 AGCAAGTGCCTGGTATGAAC 58.174 50.000 0.00 0.00 43.38 3.18
2080 12631 2.584835 AAGCAAGTGCCTGGTATGAA 57.415 45.000 0.00 0.00 43.38 2.57
2081 12632 2.304470 TGTAAGCAAGTGCCTGGTATGA 59.696 45.455 0.00 0.00 43.38 2.15
2082 12633 2.679837 CTGTAAGCAAGTGCCTGGTATG 59.320 50.000 0.00 0.00 43.38 2.39
2083 12634 2.991250 CTGTAAGCAAGTGCCTGGTAT 58.009 47.619 0.00 0.00 43.38 2.73
2084 12635 2.472695 CTGTAAGCAAGTGCCTGGTA 57.527 50.000 0.00 0.00 43.38 3.25
2085 12636 3.329300 CTGTAAGCAAGTGCCTGGT 57.671 52.632 0.00 0.00 43.38 4.00
2121 12672 2.608752 CCAACCTTGCATGTTCTCTTGC 60.609 50.000 0.00 0.00 42.57 4.01
2144 12695 2.158957 TGGCTCCTGCGAATTAAGGTAG 60.159 50.000 0.00 1.16 40.82 3.18
2168 12719 2.821366 CTGGCCTGTGACGCATCC 60.821 66.667 3.32 0.00 0.00 3.51
2174 12725 0.031178 CAAAAGCACTGGCCTGTGAC 59.969 55.000 38.22 28.99 42.56 3.67
2195 12746 2.149578 GCTAGCAGCCTATCCACAATG 58.850 52.381 10.63 0.00 34.48 2.82
2215 12766 4.942852 AGAAGCTTCCGTATCATCTTCTG 58.057 43.478 22.81 0.00 38.86 3.02
2225 12776 3.509967 TCATTGTCTGAGAAGCTTCCGTA 59.490 43.478 22.81 8.61 0.00 4.02
2227 12778 2.670414 GTCATTGTCTGAGAAGCTTCCG 59.330 50.000 22.81 11.72 33.51 4.30
2246 12797 2.286294 CGCACTTATCTGCTCAATGGTC 59.714 50.000 0.00 0.00 34.77 4.02
2250 12801 3.251479 TGTCGCACTTATCTGCTCAAT 57.749 42.857 0.00 0.00 34.77 2.57
2330 12881 3.420893 TGCCTTCTCAAGTGGGTAAATG 58.579 45.455 0.00 0.00 0.00 2.32
2332 12883 2.814097 GCTGCCTTCTCAAGTGGGTAAA 60.814 50.000 0.00 0.00 0.00 2.01
2377 12928 4.201940 CGCTAATGCAATCATCAAGGTTGA 60.202 41.667 0.00 0.00 39.40 3.18
2384 12935 4.821260 ACATTACCGCTAATGCAATCATCA 59.179 37.500 9.85 0.00 42.17 3.07
2396 12947 2.189676 TCCCTGGAAACATTACCGCTA 58.810 47.619 0.00 0.00 41.51 4.26
2399 12950 3.418047 ACTTTCCCTGGAAACATTACCG 58.582 45.455 7.26 0.00 41.51 4.02
2405 12956 2.512056 TCTTGGACTTTCCCTGGAAACA 59.488 45.455 7.26 2.28 38.95 2.83
2419 12970 6.015940 AGGATTTTTGACATGAACTCTTGGAC 60.016 38.462 0.00 0.00 0.00 4.02
2443 12994 1.741732 CGCATCTCTGGGAGTCCAAAG 60.742 57.143 12.30 8.14 43.51 2.77
2448 12999 1.142748 CACCGCATCTCTGGGAGTC 59.857 63.158 0.00 0.00 37.51 3.36
2457 13008 2.300152 CTGATACATACCCACCGCATCT 59.700 50.000 0.00 0.00 0.00 2.90
2462 13013 2.298163 GGTACCTGATACATACCCACCG 59.702 54.545 4.06 0.00 35.23 4.94
2468 13019 4.021894 CCAGCTCTGGTACCTGATACATAC 60.022 50.000 20.52 7.65 45.53 2.39
2486 13037 1.358830 ATTCTAGCATGGCCCCAGCT 61.359 55.000 16.48 16.48 42.14 4.24
2557 13108 4.248058 TGCATATGAATCATCGGTAGCAG 58.752 43.478 6.97 0.00 0.00 4.24
2656 13207 2.012673 GTTCATGCTCCCTGACATCAC 58.987 52.381 0.00 0.00 0.00 3.06
2689 13240 7.576861 TCTACTTTGTTTTCTTTTCCCGAAT 57.423 32.000 0.00 0.00 0.00 3.34
2692 13243 7.013529 CGTATCTACTTTGTTTTCTTTTCCCG 58.986 38.462 0.00 0.00 0.00 5.14
2711 13262 5.744345 CGAGTTTACAGAGCAAATCGTATCT 59.256 40.000 0.00 0.00 0.00 1.98
2717 13268 4.865365 ACTAGCGAGTTTACAGAGCAAATC 59.135 41.667 0.00 0.00 28.61 2.17
2726 13277 4.235360 GCTCTTGAACTAGCGAGTTTACA 58.765 43.478 13.72 5.41 46.23 2.41
2734 13285 2.844281 GCTTTTGCTCTTGAACTAGCG 58.156 47.619 0.00 0.00 41.77 4.26
2792 13343 5.758784 GTCTACCTTGAGTTGCTTAAGTTGT 59.241 40.000 4.02 0.00 0.00 3.32
2833 13384 5.147032 TCAAAGGGATTGAACTTTCACCAT 58.853 37.500 0.00 0.00 44.94 3.55
2834 13385 4.541705 TCAAAGGGATTGAACTTTCACCA 58.458 39.130 0.00 0.00 44.94 4.17
2860 13411 5.570234 TGTTTTTGACTTACTGGGACAAC 57.430 39.130 0.00 0.00 38.70 3.32
2949 13500 5.674525 GTCTGACACCTCATCATTTATGGA 58.325 41.667 2.24 0.00 36.15 3.41
2993 13544 1.141858 CAGGGACTATTTGAGCCCTCC 59.858 57.143 0.00 0.00 45.14 4.30
3189 13741 5.360714 GGGTCAATTTCATGCTTTCTATGGA 59.639 40.000 0.00 0.00 0.00 3.41
3195 13747 4.255833 TGTGGGTCAATTTCATGCTTTC 57.744 40.909 0.00 0.00 0.00 2.62
3338 13891 4.082895 ACTTTCTGCTCAGATGTTGATTGC 60.083 41.667 0.00 0.00 37.29 3.56
3353 13906 3.462021 ACAAGAGTCACTGACTTTCTGC 58.538 45.455 13.06 0.32 43.53 4.26
3392 13945 4.156922 TCTGTGCTACTTAACTCTCTCAGC 59.843 45.833 0.00 0.00 0.00 4.26
3576 14129 1.471119 CTGTCCATGCTTTGGCTGAT 58.529 50.000 1.73 0.00 46.01 2.90
3636 14189 8.528643 AGTTACTTGTGTATAGTACATGCAGAA 58.471 33.333 0.00 1.40 41.34 3.02
3768 14321 1.775208 CGAGCAAACTTTTCAGCAACG 59.225 47.619 0.00 0.00 0.00 4.10
4551 15150 1.447314 GGCTGCAATTTGGCTCTGC 60.447 57.895 0.50 0.00 36.60 4.26
4603 15202 7.601856 AGTCAAGAAAACAGAATTCAACACAA 58.398 30.769 8.44 0.00 0.00 3.33
4650 15249 5.390040 CGTTCAATTTATCGCAACACAGGTA 60.390 40.000 0.00 0.00 0.00 3.08
4691 15291 4.284829 TGTATCCATGACAGCAGTGAAA 57.715 40.909 0.00 0.00 0.00 2.69
4713 15315 7.453393 ACAATGATGTCTAGAAGACCTTCAAA 58.547 34.615 11.80 0.00 44.44 2.69
4757 15359 5.461078 GCCAGCAAACATATTCAGCATAAAG 59.539 40.000 0.00 0.00 0.00 1.85
5136 15749 0.807496 GATGTTCAGTTCAGCTGGCC 59.193 55.000 15.13 0.00 45.08 5.36
5141 15754 1.136141 CACGCAGATGTTCAGTTCAGC 60.136 52.381 0.00 0.00 0.00 4.26
5226 15839 6.175471 AGTGAAGTGTTCATCATATTGCAGA 58.825 36.000 0.00 0.00 42.47 4.26
5236 15849 9.155975 ACATATTTACAGAGTGAAGTGTTCATC 57.844 33.333 0.00 0.00 42.47 2.92
5252 15865 2.545113 GGAGAGCGCGGACATATTTACA 60.545 50.000 8.83 0.00 0.00 2.41
5319 15933 1.217882 ACAGGTTGAGTTTCGCTTCG 58.782 50.000 0.00 0.00 0.00 3.79
5375 15989 3.607542 GCCAAGCAAAATTCACAACATGC 60.608 43.478 0.00 0.00 0.00 4.06
5389 16003 1.586028 GGAAAGCATCGCCAAGCAA 59.414 52.632 0.00 0.00 0.00 3.91
5396 16010 1.084370 AGCTACACGGAAAGCATCGC 61.084 55.000 7.71 0.00 41.32 4.58
5397 16011 1.061131 CAAGCTACACGGAAAGCATCG 59.939 52.381 7.71 0.00 41.32 3.84
5409 16023 3.093814 TCCTTACACGATCCAAGCTACA 58.906 45.455 0.00 0.00 0.00 2.74
5439 16053 1.686355 TGGTCAACATGTTCACCACC 58.314 50.000 28.27 20.34 33.83 4.61
5456 16070 0.744874 CATCCCTTGCTGCTTCATGG 59.255 55.000 0.00 4.48 0.00 3.66
5473 16088 8.862325 AAAAAGGAAAACAGAAGGAAAAACAT 57.138 26.923 0.00 0.00 0.00 2.71
5503 16119 2.904866 GTGCGTGCCAACCCAAGA 60.905 61.111 0.00 0.00 0.00 3.02
5504 16120 2.476534 GATGTGCGTGCCAACCCAAG 62.477 60.000 0.00 0.00 0.00 3.61
5506 16122 2.983030 GATGTGCGTGCCAACCCA 60.983 61.111 0.00 0.00 0.00 4.51
5509 16125 2.255252 GTGGATGTGCGTGCCAAC 59.745 61.111 0.00 0.00 32.68 3.77
5511 16127 2.977456 GTGTGGATGTGCGTGCCA 60.977 61.111 0.00 0.00 0.00 4.92
5538 16154 0.106268 TGTGGTTGTGGGCTTGTCAT 60.106 50.000 0.00 0.00 0.00 3.06
5596 16214 2.559668 CAGGCAAGGCAAGAGAAATGAA 59.440 45.455 0.00 0.00 0.00 2.57
5659 16277 1.483827 TGCTTCAAACCAATGTTGCCA 59.516 42.857 0.00 0.00 34.13 4.92
5727 16346 9.047947 AGGGAGTAGTAAAAAGTAATGTCTCAT 57.952 33.333 0.00 0.00 0.00 2.90
5728 16347 8.431910 AGGGAGTAGTAAAAAGTAATGTCTCA 57.568 34.615 0.00 0.00 0.00 3.27
5754 16373 6.464222 AGTTGAGTCATCTATTTTGGAACGA 58.536 36.000 1.70 0.00 0.00 3.85
5808 16427 8.717821 CGTTCCAAAATAGATGACTCAACTTTA 58.282 33.333 0.00 0.00 0.00 1.85
5810 16429 6.149474 CCGTTCCAAAATAGATGACTCAACTT 59.851 38.462 0.00 0.00 0.00 2.66
5811 16430 5.643777 CCGTTCCAAAATAGATGACTCAACT 59.356 40.000 0.00 0.00 0.00 3.16
5812 16431 5.642063 TCCGTTCCAAAATAGATGACTCAAC 59.358 40.000 0.00 0.00 0.00 3.18
5813 16432 5.800296 TCCGTTCCAAAATAGATGACTCAA 58.200 37.500 0.00 0.00 0.00 3.02
5814 16433 5.414789 TCCGTTCCAAAATAGATGACTCA 57.585 39.130 0.00 0.00 0.00 3.41
5815 16434 4.811557 CCTCCGTTCCAAAATAGATGACTC 59.188 45.833 0.00 0.00 0.00 3.36
5816 16435 4.469945 TCCTCCGTTCCAAAATAGATGACT 59.530 41.667 0.00 0.00 0.00 3.41
5817 16436 4.766375 TCCTCCGTTCCAAAATAGATGAC 58.234 43.478 0.00 0.00 0.00 3.06
5818 16437 5.045869 ACTTCCTCCGTTCCAAAATAGATGA 60.046 40.000 0.00 0.00 0.00 2.92
5819 16438 5.186198 ACTTCCTCCGTTCCAAAATAGATG 58.814 41.667 0.00 0.00 0.00 2.90
5820 16439 5.437191 ACTTCCTCCGTTCCAAAATAGAT 57.563 39.130 0.00 0.00 0.00 1.98
5821 16440 4.903045 ACTTCCTCCGTTCCAAAATAGA 57.097 40.909 0.00 0.00 0.00 1.98
5822 16441 5.974108 TCTACTTCCTCCGTTCCAAAATAG 58.026 41.667 0.00 0.00 0.00 1.73
5823 16442 6.363167 TTCTACTTCCTCCGTTCCAAAATA 57.637 37.500 0.00 0.00 0.00 1.40
5824 16443 4.903045 TCTACTTCCTCCGTTCCAAAAT 57.097 40.909 0.00 0.00 0.00 1.82
5825 16444 4.504340 CCTTCTACTTCCTCCGTTCCAAAA 60.504 45.833 0.00 0.00 0.00 2.44
5826 16445 3.007614 CCTTCTACTTCCTCCGTTCCAAA 59.992 47.826 0.00 0.00 0.00 3.28
5827 16446 2.565834 CCTTCTACTTCCTCCGTTCCAA 59.434 50.000 0.00 0.00 0.00 3.53
5828 16447 2.176889 CCTTCTACTTCCTCCGTTCCA 58.823 52.381 0.00 0.00 0.00 3.53
5837 16456 5.221204 CGTCCATACCTTACCTTCTACTTCC 60.221 48.000 0.00 0.00 0.00 3.46
5839 16458 5.267587 ACGTCCATACCTTACCTTCTACTT 58.732 41.667 0.00 0.00 0.00 2.24
5860 16479 8.644619 CCTATCAACAATAAATACGACCATACG 58.355 37.037 0.00 0.00 39.31 3.06
5861 16480 9.485206 ACCTATCAACAATAAATACGACCATAC 57.515 33.333 0.00 0.00 0.00 2.39
5875 16494 6.183360 ACAACCGAGCTATACCTATCAACAAT 60.183 38.462 0.00 0.00 0.00 2.71
5898 16517 5.309543 CCAATATAGATAGGGTTGGTGGACA 59.690 44.000 0.00 0.00 35.68 4.02
5948 16588 4.160439 TCATTCAAGGTAGAGGCAGTAGTG 59.840 45.833 0.00 0.00 0.00 2.74
5951 16591 3.706594 CCTCATTCAAGGTAGAGGCAGTA 59.293 47.826 0.00 0.00 40.98 2.74
5983 16623 3.911868 TGCATTGTTCTAAACACATGCC 58.088 40.909 22.39 13.36 45.09 4.40
5984 16624 4.925054 ACATGCATTGTTCTAAACACATGC 59.075 37.500 20.54 20.54 42.48 4.06
5992 16632 6.018751 GCTCTAATCGACATGCATTGTTCTAA 60.019 38.462 0.00 0.00 39.18 2.10
5993 16633 5.463392 GCTCTAATCGACATGCATTGTTCTA 59.537 40.000 0.00 0.00 39.18 2.10
6008 16648 0.460284 ACGCCCAACTGCTCTAATCG 60.460 55.000 0.00 0.00 0.00 3.34
6024 16664 3.977244 CCCAGTGGGTTGCAACGC 61.977 66.667 32.93 32.93 38.25 4.84
6025 16665 1.178534 ATTCCCAGTGGGTTGCAACG 61.179 55.000 27.87 8.83 44.74 4.10
6026 16666 0.318120 CATTCCCAGTGGGTTGCAAC 59.682 55.000 27.87 21.59 44.74 4.17
6027 16667 1.470996 GCATTCCCAGTGGGTTGCAA 61.471 55.000 34.60 22.45 45.35 4.08
6028 16668 1.907807 GCATTCCCAGTGGGTTGCA 60.908 57.895 34.60 19.09 45.35 4.08
6029 16669 2.973082 GCATTCCCAGTGGGTTGC 59.027 61.111 30.12 30.12 44.74 4.17
6030 16670 1.303236 TCGCATTCCCAGTGGGTTG 60.303 57.895 27.87 24.59 44.74 3.77
6031 16671 1.002134 CTCGCATTCCCAGTGGGTT 60.002 57.895 27.87 13.99 44.74 4.11
6032 16672 2.671070 CTCGCATTCCCAGTGGGT 59.329 61.111 27.87 6.82 44.74 4.51
6033 16673 2.124570 CCTCGCATTCCCAGTGGG 60.125 66.667 23.57 23.57 46.11 4.61
6034 16674 2.825836 GCCTCGCATTCCCAGTGG 60.826 66.667 0.63 0.63 0.00 4.00
6035 16675 2.046023 TGCCTCGCATTCCCAGTG 60.046 61.111 0.00 0.00 31.71 3.66
6044 16684 0.955428 GTGTTCCTCAATGCCTCGCA 60.955 55.000 0.00 0.00 44.86 5.10
6045 16685 0.955428 TGTGTTCCTCAATGCCTCGC 60.955 55.000 0.00 0.00 0.00 5.03
6046 16686 1.667724 GATGTGTTCCTCAATGCCTCG 59.332 52.381 0.00 0.00 0.00 4.63
6047 16687 2.019984 GGATGTGTTCCTCAATGCCTC 58.980 52.381 0.00 0.00 41.78 4.70
6048 16688 1.341383 GGGATGTGTTCCTCAATGCCT 60.341 52.381 0.00 0.00 44.75 4.75
6049 16689 1.106285 GGGATGTGTTCCTCAATGCC 58.894 55.000 0.00 0.00 44.75 4.40
6050 16690 2.134789 AGGGATGTGTTCCTCAATGC 57.865 50.000 0.00 0.00 44.75 3.56
6051 16691 3.424703 ACAAGGGATGTGTTCCTCAATG 58.575 45.455 0.00 0.00 44.75 2.82
6052 16692 3.814504 ACAAGGGATGTGTTCCTCAAT 57.185 42.857 0.00 0.00 44.75 2.57
6053 16693 3.221771 CAACAAGGGATGTGTTCCTCAA 58.778 45.455 0.00 0.00 42.99 3.02
6054 16694 2.862541 CAACAAGGGATGTGTTCCTCA 58.137 47.619 0.00 0.00 42.99 3.86
6055 16695 1.541588 GCAACAAGGGATGTGTTCCTC 59.458 52.381 0.00 0.00 42.99 3.71
6056 16696 1.620822 GCAACAAGGGATGTGTTCCT 58.379 50.000 0.00 0.00 42.99 3.36
6057 16697 0.603065 GGCAACAAGGGATGTGTTCC 59.397 55.000 0.00 0.00 42.99 3.62
6071 16711 1.417577 GCGTTGTTGTTGGTGGCAAC 61.418 55.000 0.00 0.00 44.50 4.17
6072 16712 1.153745 GCGTTGTTGTTGGTGGCAA 60.154 52.632 0.00 0.00 0.00 4.52
6073 16713 1.599606 AAGCGTTGTTGTTGGTGGCA 61.600 50.000 0.00 0.00 0.00 4.92
6074 16714 0.869880 GAAGCGTTGTTGTTGGTGGC 60.870 55.000 0.00 0.00 0.00 5.01
6075 16715 0.738389 AGAAGCGTTGTTGTTGGTGG 59.262 50.000 0.00 0.00 0.00 4.61
6076 16716 1.268539 GGAGAAGCGTTGTTGTTGGTG 60.269 52.381 0.00 0.00 0.00 4.17
6077 16717 1.021968 GGAGAAGCGTTGTTGTTGGT 58.978 50.000 0.00 0.00 0.00 3.67
6078 16718 0.041312 CGGAGAAGCGTTGTTGTTGG 60.041 55.000 0.00 0.00 0.00 3.77
6079 16719 0.041312 CCGGAGAAGCGTTGTTGTTG 60.041 55.000 0.00 0.00 0.00 3.33
6080 16720 0.463116 ACCGGAGAAGCGTTGTTGTT 60.463 50.000 9.46 0.00 0.00 2.83
6081 16721 0.463116 AACCGGAGAAGCGTTGTTGT 60.463 50.000 9.46 0.00 0.00 3.32
6082 16722 1.459592 CTAACCGGAGAAGCGTTGTTG 59.540 52.381 9.46 0.00 0.00 3.33
6083 16723 1.069668 ACTAACCGGAGAAGCGTTGTT 59.930 47.619 9.46 0.00 0.00 2.83
6084 16724 0.677842 ACTAACCGGAGAAGCGTTGT 59.322 50.000 9.46 0.00 0.00 3.32
6085 16725 1.068474 CACTAACCGGAGAAGCGTTG 58.932 55.000 9.46 0.00 0.00 4.10
6086 16726 0.669625 GCACTAACCGGAGAAGCGTT 60.670 55.000 9.46 0.00 0.00 4.84
6087 16727 1.080025 GCACTAACCGGAGAAGCGT 60.080 57.895 9.46 0.00 0.00 5.07
6088 16728 0.460284 ATGCACTAACCGGAGAAGCG 60.460 55.000 9.46 0.00 0.00 4.68
6089 16729 1.398390 CAATGCACTAACCGGAGAAGC 59.602 52.381 9.46 6.93 0.00 3.86
6090 16730 1.398390 GCAATGCACTAACCGGAGAAG 59.602 52.381 9.46 4.49 0.00 2.85
6091 16731 1.271108 TGCAATGCACTAACCGGAGAA 60.271 47.619 9.46 0.00 31.71 2.87
6092 16732 0.323302 TGCAATGCACTAACCGGAGA 59.677 50.000 9.46 0.00 31.71 3.71
6093 16733 1.382522 ATGCAATGCACTAACCGGAG 58.617 50.000 11.23 0.00 43.04 4.63
6094 16734 2.285083 GTATGCAATGCACTAACCGGA 58.715 47.619 11.23 0.00 43.04 5.14
6095 16735 1.333619 GGTATGCAATGCACTAACCGG 59.666 52.381 11.23 0.00 43.04 5.28
6096 16736 2.013400 TGGTATGCAATGCACTAACCG 58.987 47.619 22.78 0.00 43.04 4.44
6097 16737 3.631686 TCATGGTATGCAATGCACTAACC 59.368 43.478 22.07 22.07 43.04 2.85
6098 16738 4.576053 TCTCATGGTATGCAATGCACTAAC 59.424 41.667 11.23 9.34 43.04 2.34
6099 16739 4.779696 TCTCATGGTATGCAATGCACTAA 58.220 39.130 11.23 0.00 43.04 2.24
6100 16740 4.101430 TCTCTCATGGTATGCAATGCACTA 59.899 41.667 11.23 0.00 43.04 2.74
6101 16741 3.118149 TCTCTCATGGTATGCAATGCACT 60.118 43.478 11.23 2.57 43.04 4.40
6102 16742 3.208594 TCTCTCATGGTATGCAATGCAC 58.791 45.455 11.23 0.00 43.04 4.57
6103 16743 3.564053 TCTCTCATGGTATGCAATGCA 57.436 42.857 11.44 11.44 44.86 3.96
6104 16744 3.881688 AGTTCTCTCATGGTATGCAATGC 59.118 43.478 0.00 0.00 0.00 3.56
6105 16745 5.121105 TCAGTTCTCTCATGGTATGCAATG 58.879 41.667 0.00 0.00 0.00 2.82
6106 16746 5.363562 TCAGTTCTCTCATGGTATGCAAT 57.636 39.130 0.00 0.00 0.00 3.56
6107 16747 4.824479 TCAGTTCTCTCATGGTATGCAA 57.176 40.909 0.00 0.00 0.00 4.08
6108 16748 4.824479 TTCAGTTCTCTCATGGTATGCA 57.176 40.909 0.00 0.00 0.00 3.96
6109 16749 4.514441 CCATTCAGTTCTCTCATGGTATGC 59.486 45.833 0.00 0.00 31.58 3.14
6110 16750 5.061853 CCCATTCAGTTCTCTCATGGTATG 58.938 45.833 0.00 0.00 33.10 2.39
6111 16751 4.971282 TCCCATTCAGTTCTCTCATGGTAT 59.029 41.667 0.00 0.00 33.10 2.73
6112 16752 4.361783 TCCCATTCAGTTCTCTCATGGTA 58.638 43.478 0.00 0.00 33.10 3.25
6113 16753 3.184628 TCCCATTCAGTTCTCTCATGGT 58.815 45.455 0.00 0.00 33.10 3.55
6114 16754 3.920231 TCCCATTCAGTTCTCTCATGG 57.080 47.619 0.00 0.00 34.02 3.66
6115 16755 4.639310 CCTTTCCCATTCAGTTCTCTCATG 59.361 45.833 0.00 0.00 0.00 3.07
6116 16756 4.853007 CCTTTCCCATTCAGTTCTCTCAT 58.147 43.478 0.00 0.00 0.00 2.90
6117 16757 3.560025 GCCTTTCCCATTCAGTTCTCTCA 60.560 47.826 0.00 0.00 0.00 3.27
6118 16758 3.013219 GCCTTTCCCATTCAGTTCTCTC 58.987 50.000 0.00 0.00 0.00 3.20
6119 16759 2.291217 GGCCTTTCCCATTCAGTTCTCT 60.291 50.000 0.00 0.00 0.00 3.10
6120 16760 2.095461 GGCCTTTCCCATTCAGTTCTC 58.905 52.381 0.00 0.00 0.00 2.87
6121 16761 1.614317 CGGCCTTTCCCATTCAGTTCT 60.614 52.381 0.00 0.00 0.00 3.01
6122 16762 0.811281 CGGCCTTTCCCATTCAGTTC 59.189 55.000 0.00 0.00 0.00 3.01
6123 16763 0.112412 ACGGCCTTTCCCATTCAGTT 59.888 50.000 0.00 0.00 0.00 3.16
6124 16764 0.112412 AACGGCCTTTCCCATTCAGT 59.888 50.000 0.00 0.00 0.00 3.41
6125 16765 1.067635 CAAACGGCCTTTCCCATTCAG 60.068 52.381 0.00 0.00 0.00 3.02
6126 16766 0.965439 CAAACGGCCTTTCCCATTCA 59.035 50.000 0.00 0.00 0.00 2.57
6127 16767 0.246360 CCAAACGGCCTTTCCCATTC 59.754 55.000 0.00 0.00 0.00 2.67
6128 16768 0.178947 TCCAAACGGCCTTTCCCATT 60.179 50.000 0.00 0.00 0.00 3.16
6129 16769 0.041090 ATCCAAACGGCCTTTCCCAT 59.959 50.000 0.00 0.00 0.00 4.00
6130 16770 0.897863 CATCCAAACGGCCTTTCCCA 60.898 55.000 0.00 0.00 0.00 4.37
6131 16771 0.898326 ACATCCAAACGGCCTTTCCC 60.898 55.000 0.00 0.00 0.00 3.97
6132 16772 0.966179 AACATCCAAACGGCCTTTCC 59.034 50.000 0.00 0.00 0.00 3.13
6133 16773 1.336795 CCAACATCCAAACGGCCTTTC 60.337 52.381 0.00 0.00 0.00 2.62
6134 16774 0.678950 CCAACATCCAAACGGCCTTT 59.321 50.000 0.00 0.00 0.00 3.11
6135 16775 0.178975 TCCAACATCCAAACGGCCTT 60.179 50.000 0.00 0.00 0.00 4.35
6136 16776 0.609131 CTCCAACATCCAAACGGCCT 60.609 55.000 0.00 0.00 0.00 5.19
6137 16777 0.608035 TCTCCAACATCCAAACGGCC 60.608 55.000 0.00 0.00 0.00 6.13
6138 16778 1.133025 CATCTCCAACATCCAAACGGC 59.867 52.381 0.00 0.00 0.00 5.68
6139 16779 2.679837 CTCATCTCCAACATCCAAACGG 59.320 50.000 0.00 0.00 0.00 4.44
6140 16780 2.096496 GCTCATCTCCAACATCCAAACG 59.904 50.000 0.00 0.00 0.00 3.60
6141 16781 3.084039 TGCTCATCTCCAACATCCAAAC 58.916 45.455 0.00 0.00 0.00 2.93
6142 16782 3.438216 TGCTCATCTCCAACATCCAAA 57.562 42.857 0.00 0.00 0.00 3.28
6143 16783 3.009363 TCTTGCTCATCTCCAACATCCAA 59.991 43.478 0.00 0.00 0.00 3.53
6144 16784 2.573009 TCTTGCTCATCTCCAACATCCA 59.427 45.455 0.00 0.00 0.00 3.41
6145 16785 2.941720 GTCTTGCTCATCTCCAACATCC 59.058 50.000 0.00 0.00 0.00 3.51
6146 16786 3.373439 GTGTCTTGCTCATCTCCAACATC 59.627 47.826 0.00 0.00 0.00 3.06
6147 16787 3.244665 TGTGTCTTGCTCATCTCCAACAT 60.245 43.478 0.00 0.00 0.00 2.71
6148 16788 2.104622 TGTGTCTTGCTCATCTCCAACA 59.895 45.455 0.00 0.00 0.00 3.33
6149 16789 2.771089 TGTGTCTTGCTCATCTCCAAC 58.229 47.619 0.00 0.00 0.00 3.77
6150 16790 3.490439 TTGTGTCTTGCTCATCTCCAA 57.510 42.857 0.00 0.00 0.00 3.53
6151 16791 3.490439 TTTGTGTCTTGCTCATCTCCA 57.510 42.857 0.00 0.00 0.00 3.86
6152 16792 3.755378 ACATTTGTGTCTTGCTCATCTCC 59.245 43.478 0.00 0.00 0.00 3.71
6153 16793 5.368256 AACATTTGTGTCTTGCTCATCTC 57.632 39.130 0.00 0.00 0.00 2.75
6154 16794 5.106948 CGTAACATTTGTGTCTTGCTCATCT 60.107 40.000 0.00 0.00 0.00 2.90
6155 16795 5.082059 CGTAACATTTGTGTCTTGCTCATC 58.918 41.667 0.00 0.00 0.00 2.92
6156 16796 4.083324 CCGTAACATTTGTGTCTTGCTCAT 60.083 41.667 0.00 0.00 0.00 2.90
6157 16797 3.249799 CCGTAACATTTGTGTCTTGCTCA 59.750 43.478 0.00 0.00 0.00 4.26
6158 16798 3.496884 TCCGTAACATTTGTGTCTTGCTC 59.503 43.478 0.00 0.00 0.00 4.26
6159 16799 3.472652 TCCGTAACATTTGTGTCTTGCT 58.527 40.909 0.00 0.00 0.00 3.91
6160 16800 3.889196 TCCGTAACATTTGTGTCTTGC 57.111 42.857 0.00 0.00 0.00 4.01
6161 16801 9.485591 GTATAAATCCGTAACATTTGTGTCTTG 57.514 33.333 0.00 0.00 0.00 3.02
6162 16802 9.444600 AGTATAAATCCGTAACATTTGTGTCTT 57.555 29.630 0.00 0.00 0.00 3.01
6163 16803 9.444600 AAGTATAAATCCGTAACATTTGTGTCT 57.555 29.630 0.00 0.00 0.00 3.41
6164 16804 9.485591 CAAGTATAAATCCGTAACATTTGTGTC 57.514 33.333 0.00 0.00 0.00 3.67
6165 16805 9.221933 TCAAGTATAAATCCGTAACATTTGTGT 57.778 29.630 0.00 0.00 0.00 3.72
6166 16806 9.702726 CTCAAGTATAAATCCGTAACATTTGTG 57.297 33.333 0.00 0.00 0.00 3.33
6167 16807 8.889717 CCTCAAGTATAAATCCGTAACATTTGT 58.110 33.333 0.00 0.00 0.00 2.83
6168 16808 9.104965 TCCTCAAGTATAAATCCGTAACATTTG 57.895 33.333 0.00 0.00 0.00 2.32
6169 16809 9.847224 ATCCTCAAGTATAAATCCGTAACATTT 57.153 29.630 0.00 0.00 0.00 2.32
6172 16812 9.976511 CTTATCCTCAAGTATAAATCCGTAACA 57.023 33.333 0.00 0.00 0.00 2.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.