Multiple sequence alignment - TraesCS3B01G518300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G518300 chr3B 100.000 4660 0 0 1 4660 761367409 761372068 0.000000e+00 8606.0
1 TraesCS3B01G518300 chr3B 86.207 1740 190 20 1962 3676 761393466 761395180 0.000000e+00 1838.0
2 TraesCS3B01G518300 chr3B 85.801 1148 138 15 2641 3777 761004691 761005824 0.000000e+00 1194.0
3 TraesCS3B01G518300 chr3B 85.025 1015 127 16 2658 3662 761195160 761196159 0.000000e+00 1009.0
4 TraesCS3B01G518300 chr3B 80.853 1243 176 34 1487 2689 760492530 760491310 0.000000e+00 920.0
5 TraesCS3B01G518300 chr3B 86.644 599 42 14 1 589 761060181 761060751 3.060000e-176 628.0
6 TraesCS3B01G518300 chr3B 85.045 555 67 12 3127 3676 761426781 761427324 6.810000e-153 551.0
7 TraesCS3B01G518300 chr3B 78.934 788 138 16 1544 2316 760481645 760480871 1.160000e-140 510.0
8 TraesCS3B01G518300 chr3B 84.342 479 66 6 3305 3777 761061952 761062427 1.180000e-125 460.0
9 TraesCS3B01G518300 chr3B 96.602 206 6 1 4292 4497 281565931 281566135 1.610000e-89 340.0
10 TraesCS3B01G518300 chr3B 96.154 208 7 1 4290 4497 686638413 686638619 5.780000e-89 339.0
11 TraesCS3B01G518300 chr3B 96.585 205 6 1 4293 4497 766859311 766859514 5.780000e-89 339.0
12 TraesCS3B01G518300 chr3B 96.429 168 4 2 4495 4660 47096150 47096317 4.590000e-70 276.0
13 TraesCS3B01G518300 chr3B 96.429 168 4 2 4495 4660 788791255 788791422 4.590000e-70 276.0
14 TraesCS3B01G518300 chr3B 95.690 116 5 0 996 1111 760492944 760492829 2.210000e-43 187.0
15 TraesCS3B01G518300 chr3B 85.950 121 9 3 997 1109 760482407 760482287 6.330000e-24 122.0
16 TraesCS3B01G518300 chr3B 84.615 78 9 2 3899 3975 761570810 761570885 1.800000e-09 75.0
17 TraesCS3B01G518300 chr3A 90.164 3050 199 34 1302 4297 706334350 706337352 0.000000e+00 3877.0
18 TraesCS3B01G518300 chr3A 86.827 3454 267 88 753 4106 706016530 706019895 0.000000e+00 3685.0
19 TraesCS3B01G518300 chr3A 86.155 1329 155 15 2358 3676 706258530 706259839 0.000000e+00 1408.0
20 TraesCS3B01G518300 chr3A 82.713 1371 183 31 2402 3747 705310555 705309214 0.000000e+00 1170.0
21 TraesCS3B01G518300 chr3A 84.152 1161 141 24 2641 3777 705949666 705950807 0.000000e+00 1085.0
22 TraesCS3B01G518300 chr3A 82.814 1123 144 30 1489 2578 705948561 705949667 0.000000e+00 959.0
23 TraesCS3B01G518300 chr3A 81.698 1213 147 36 1519 2689 705369976 705368797 0.000000e+00 941.0
24 TraesCS3B01G518300 chr3A 87.941 680 50 15 1 678 706015835 706016484 0.000000e+00 773.0
25 TraesCS3B01G518300 chr3A 78.089 785 120 34 1549 2316 705311304 705310555 2.560000e-122 449.0
26 TraesCS3B01G518300 chr3A 84.140 372 28 18 921 1272 706257217 706257577 9.660000e-87 331.0
27 TraesCS3B01G518300 chr3A 85.093 322 34 6 3990 4297 706341675 706341996 2.710000e-82 316.0
28 TraesCS3B01G518300 chr3A 84.887 311 33 6 4001 4297 706061617 706061927 7.580000e-78 302.0
29 TraesCS3B01G518300 chr3A 84.049 326 27 9 954 1278 706116850 706117151 1.640000e-74 291.0
30 TraesCS3B01G518300 chr3A 93.966 116 7 0 997 1112 705311752 705311637 4.790000e-40 176.0
31 TraesCS3B01G518300 chr3A 85.616 146 7 4 1100 1245 706402501 706402632 1.750000e-29 141.0
32 TraesCS3B01G518300 chr3A 91.935 62 5 0 617 678 706334032 706334093 2.310000e-13 87.9
33 TraesCS3B01G518300 chr3D 90.569 2810 164 40 1556 4297 572509854 572507078 0.000000e+00 3627.0
34 TraesCS3B01G518300 chr3D 83.024 2857 279 69 894 3666 572490159 572487425 0.000000e+00 2399.0
35 TraesCS3B01G518300 chr3D 87.745 612 57 9 1 601 572511356 572510752 0.000000e+00 699.0
36 TraesCS3B01G518300 chr3D 84.286 770 55 25 810 1522 572510615 572509855 0.000000e+00 691.0
37 TraesCS3B01G518300 chr3D 84.810 553 60 13 2641 3175 572554328 572553782 6.860000e-148 534.0
38 TraesCS3B01G518300 chr3D 79.581 191 18 12 954 1125 572555919 572555731 2.950000e-22 117.0
39 TraesCS3B01G518300 chr3D 84.034 119 19 0 1 119 113009034 113009152 1.060000e-21 115.0
40 TraesCS3B01G518300 chrUn 82.496 1194 149 35 1537 2689 131949629 131950803 0.000000e+00 992.0
41 TraesCS3B01G518300 chrUn 79.618 785 126 28 1549 2316 132057668 132058435 2.470000e-147 532.0
42 TraesCS3B01G518300 chrUn 96.429 168 3 3 4495 4660 394561271 394561105 1.650000e-69 274.0
43 TraesCS3B01G518300 chrUn 96.429 168 3 3 4495 4660 408042572 408042406 1.650000e-69 274.0
44 TraesCS3B01G518300 chrUn 93.252 163 6 1 954 1111 131949073 131949235 7.800000e-58 235.0
45 TraesCS3B01G518300 chrUn 92.982 114 6 2 997 1109 132057176 132057288 1.040000e-36 165.0
46 TraesCS3B01G518300 chr4B 85.920 625 67 9 1445 2064 566641640 566641032 0.000000e+00 647.0
47 TraesCS3B01G518300 chr4B 87.108 574 52 10 1445 2013 635260398 635259842 8.510000e-177 630.0
48 TraesCS3B01G518300 chr4B 86.237 574 57 11 1445 2013 649510968 649511524 1.850000e-168 603.0
49 TraesCS3B01G518300 chr4B 97.073 205 6 0 4293 4497 663818238 663818034 3.450000e-91 346.0
50 TraesCS3B01G518300 chr4B 84.483 116 8 6 1013 1119 605377608 605377722 6.380000e-19 106.0
51 TraesCS3B01G518300 chr2B 86.934 574 53 11 1445 2013 785017857 785018413 3.960000e-175 625.0
52 TraesCS3B01G518300 chr2B 86.268 568 56 11 1445 2007 76638547 76639097 8.630000e-167 597.0
53 TraesCS3B01G518300 chr2B 97.059 204 6 0 4294 4497 630657932 630658135 1.240000e-90 344.0
54 TraesCS3B01G518300 chr2B 96.635 208 4 2 4293 4497 678596125 678596332 4.460000e-90 342.0
55 TraesCS3B01G518300 chr7B 86.254 582 56 13 1445 2021 716921518 716920956 1.110000e-170 610.0
56 TraesCS3B01G518300 chr7B 86.261 575 55 11 1445 2013 96390934 96391490 1.850000e-168 603.0
57 TraesCS3B01G518300 chr7B 86.237 574 57 10 1445 2013 465167418 465166862 1.850000e-168 603.0
58 TraesCS3B01G518300 chr7B 86.063 574 58 10 1445 2013 560947030 560946474 8.630000e-167 597.0
59 TraesCS3B01G518300 chr7B 85.714 574 60 11 1445 2013 225876356 225876912 1.870000e-163 586.0
60 TraesCS3B01G518300 chr7B 97.512 201 5 0 4297 4497 689846199 689845999 1.240000e-90 344.0
61 TraesCS3B01G518300 chr7B 96.429 168 2 4 4495 4660 18018676 18018511 1.650000e-69 274.0
62 TraesCS3B01G518300 chr5B 86.411 574 56 11 1445 2013 325492860 325493416 3.990000e-170 608.0
63 TraesCS3B01G518300 chr5B 86.237 574 57 10 1445 2013 469467019 469466463 1.850000e-168 603.0
64 TraesCS3B01G518300 chr5B 98.049 205 3 1 4294 4497 606292548 606292344 5.730000e-94 355.0
65 TraesCS3B01G518300 chr5B 97.024 168 3 2 4495 4660 702146178 702146011 9.870000e-72 281.0
66 TraesCS3B01G518300 chr5B 96.429 168 4 2 4495 4660 540418973 540418806 4.590000e-70 276.0
67 TraesCS3B01G518300 chr5B 96.429 168 4 2 4495 4660 702187423 702187256 4.590000e-70 276.0
68 TraesCS3B01G518300 chr5B 83.019 106 9 5 1013 1110 151001767 151001663 2.310000e-13 87.9
69 TraesCS3B01G518300 chr1B 86.237 574 57 11 1445 2013 604434168 604434724 1.850000e-168 603.0
70 TraesCS3B01G518300 chr1B 96.429 168 3 3 4495 4660 29147879 29148045 1.650000e-69 274.0
71 TraesCS3B01G518300 chr1B 83.871 186 16 2 1 186 14560953 14561124 1.040000e-36 165.0
72 TraesCS3B01G518300 chr6B 86.063 574 57 12 1445 2013 33183227 33183782 3.100000e-166 595.0
73 TraesCS3B01G518300 chr1D 89.095 486 44 8 58 541 96699487 96699965 3.100000e-166 595.0
74 TraesCS3B01G518300 chr4A 96.714 213 6 1 4286 4497 646205449 646205237 2.060000e-93 353.0
75 TraesCS3B01G518300 chr7D 87.938 257 25 1 1 251 472884112 472883856 9.800000e-77 298.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G518300 chr3B 761367409 761372068 4659 False 8606.000000 8606 100.000000 1 4660 1 chr3B.!!$F6 4659
1 TraesCS3B01G518300 chr3B 761393466 761395180 1714 False 1838.000000 1838 86.207000 1962 3676 1 chr3B.!!$F7 1714
2 TraesCS3B01G518300 chr3B 761004691 761005824 1133 False 1194.000000 1194 85.801000 2641 3777 1 chr3B.!!$F4 1136
3 TraesCS3B01G518300 chr3B 761195160 761196159 999 False 1009.000000 1009 85.025000 2658 3662 1 chr3B.!!$F5 1004
4 TraesCS3B01G518300 chr3B 760491310 760492944 1634 True 553.500000 920 88.271500 996 2689 2 chr3B.!!$R2 1693
5 TraesCS3B01G518300 chr3B 761426781 761427324 543 False 551.000000 551 85.045000 3127 3676 1 chr3B.!!$F8 549
6 TraesCS3B01G518300 chr3B 761060181 761062427 2246 False 544.000000 628 85.493000 1 3777 2 chr3B.!!$F12 3776
7 TraesCS3B01G518300 chr3B 760480871 760482407 1536 True 316.000000 510 82.442000 997 2316 2 chr3B.!!$R1 1319
8 TraesCS3B01G518300 chr3A 706015835 706019895 4060 False 2229.000000 3685 87.384000 1 4106 2 chr3A.!!$F6 4105
9 TraesCS3B01G518300 chr3A 706334032 706337352 3320 False 1982.450000 3877 91.049500 617 4297 2 chr3A.!!$F8 3680
10 TraesCS3B01G518300 chr3A 705948561 705950807 2246 False 1022.000000 1085 83.483000 1489 3777 2 chr3A.!!$F5 2288
11 TraesCS3B01G518300 chr3A 705368797 705369976 1179 True 941.000000 941 81.698000 1519 2689 1 chr3A.!!$R1 1170
12 TraesCS3B01G518300 chr3A 706257217 706259839 2622 False 869.500000 1408 85.147500 921 3676 2 chr3A.!!$F7 2755
13 TraesCS3B01G518300 chr3A 705309214 705311752 2538 True 598.333333 1170 84.922667 997 3747 3 chr3A.!!$R2 2750
14 TraesCS3B01G518300 chr3D 572487425 572490159 2734 True 2399.000000 2399 83.024000 894 3666 1 chr3D.!!$R1 2772
15 TraesCS3B01G518300 chr3D 572507078 572511356 4278 True 1672.333333 3627 87.533333 1 4297 3 chr3D.!!$R2 4296
16 TraesCS3B01G518300 chr3D 572553782 572555919 2137 True 325.500000 534 82.195500 954 3175 2 chr3D.!!$R3 2221
17 TraesCS3B01G518300 chrUn 131949073 131950803 1730 False 613.500000 992 87.874000 954 2689 2 chrUn.!!$F1 1735
18 TraesCS3B01G518300 chrUn 132057176 132058435 1259 False 348.500000 532 86.300000 997 2316 2 chrUn.!!$F2 1319
19 TraesCS3B01G518300 chr4B 566641032 566641640 608 True 647.000000 647 85.920000 1445 2064 1 chr4B.!!$R1 619
20 TraesCS3B01G518300 chr4B 635259842 635260398 556 True 630.000000 630 87.108000 1445 2013 1 chr4B.!!$R2 568
21 TraesCS3B01G518300 chr4B 649510968 649511524 556 False 603.000000 603 86.237000 1445 2013 1 chr4B.!!$F2 568
22 TraesCS3B01G518300 chr2B 785017857 785018413 556 False 625.000000 625 86.934000 1445 2013 1 chr2B.!!$F4 568
23 TraesCS3B01G518300 chr2B 76638547 76639097 550 False 597.000000 597 86.268000 1445 2007 1 chr2B.!!$F1 562
24 TraesCS3B01G518300 chr7B 716920956 716921518 562 True 610.000000 610 86.254000 1445 2021 1 chr7B.!!$R5 576
25 TraesCS3B01G518300 chr7B 96390934 96391490 556 False 603.000000 603 86.261000 1445 2013 1 chr7B.!!$F1 568
26 TraesCS3B01G518300 chr7B 465166862 465167418 556 True 603.000000 603 86.237000 1445 2013 1 chr7B.!!$R2 568
27 TraesCS3B01G518300 chr7B 560946474 560947030 556 True 597.000000 597 86.063000 1445 2013 1 chr7B.!!$R3 568
28 TraesCS3B01G518300 chr7B 225876356 225876912 556 False 586.000000 586 85.714000 1445 2013 1 chr7B.!!$F2 568
29 TraesCS3B01G518300 chr5B 325492860 325493416 556 False 608.000000 608 86.411000 1445 2013 1 chr5B.!!$F1 568
30 TraesCS3B01G518300 chr5B 469466463 469467019 556 True 603.000000 603 86.237000 1445 2013 1 chr5B.!!$R2 568
31 TraesCS3B01G518300 chr1B 604434168 604434724 556 False 603.000000 603 86.237000 1445 2013 1 chr1B.!!$F3 568
32 TraesCS3B01G518300 chr6B 33183227 33183782 555 False 595.000000 595 86.063000 1445 2013 1 chr6B.!!$F1 568

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
77 78 0.103208 CCACGAGGCCACATCTCTAC 59.897 60.000 5.01 0.00 0.00 2.59 F
378 391 0.107214 CCATAGGGGCACAACACGAT 60.107 55.000 0.00 0.00 0.00 3.73 F
816 890 0.525761 AAAACGGGCATCGAACCATG 59.474 50.000 9.79 4.43 42.43 3.66 F
883 1602 0.679640 CAGAGAGAGAGGGCACGAGT 60.680 60.000 0.00 0.00 0.00 4.18 F
1245 2375 0.960861 TCTCGTCTGTCCATGTCGCT 60.961 55.000 0.00 0.00 0.00 4.93 F
1360 2544 1.152368 CCAGGCCTCCATGAATCCC 59.848 63.158 0.00 0.00 0.00 3.85 F
1668 2930 1.620323 GTGGAAATCAGGCCTTGCTTT 59.380 47.619 0.00 2.62 0.00 3.51 F
3455 4965 1.601759 GGCAGAGCAGTTCAAGGCA 60.602 57.895 0.00 0.00 0.00 4.75 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1199 2315 0.034896 CTACCACAGACCACACCACC 59.965 60.000 0.00 0.0 0.00 4.61 R
1205 2321 0.179134 CTAGCGCTACCACAGACCAC 60.179 60.000 14.45 0.0 0.00 4.16 R
2270 3698 2.743838 CGGGTACGGGCAATAACTTCAT 60.744 50.000 0.00 0.0 36.18 2.57 R
2559 4018 3.641434 AGCAGTGCTGAATAATCCAGT 57.359 42.857 18.98 0.0 37.57 4.00 R
3072 4571 1.466167 CCCAGAAAGCACAGACGAATG 59.534 52.381 0.00 0.0 0.00 2.67 R
3276 4781 8.548721 AGAACTTAAGAAAATATGATAACCGCG 58.451 33.333 10.09 0.0 0.00 6.46 R
3632 5142 0.462581 TCAACTCCATGATGGCGCTC 60.463 55.000 6.59 0.0 37.47 5.03 R
4366 5928 0.035176 AAAACCCGCGCTACTGGTAA 59.965 50.000 5.56 0.0 34.24 2.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
38 39 7.281549 GGAACATACATATTTTTCCTGGTACGT 59.718 37.037 0.00 0.00 0.00 3.57
47 48 3.547054 TTCCTGGTACGTGTGTTTTCT 57.453 42.857 0.00 0.00 0.00 2.52
77 78 0.103208 CCACGAGGCCACATCTCTAC 59.897 60.000 5.01 0.00 0.00 2.59
122 123 1.971505 ATCGATCCAAGCTTCCCGCA 61.972 55.000 0.00 0.00 42.61 5.69
136 137 0.389426 CCCGCACGTACTTTGTAGCT 60.389 55.000 0.00 0.00 0.00 3.32
138 139 1.916000 CCGCACGTACTTTGTAGCTAC 59.084 52.381 17.30 17.30 0.00 3.58
176 188 0.318441 TCTCACAGTGTAGCAGCCAC 59.682 55.000 0.00 0.00 0.00 5.01
177 189 0.319728 CTCACAGTGTAGCAGCCACT 59.680 55.000 0.00 0.00 43.76 4.00
178 190 0.758734 TCACAGTGTAGCAGCCACTT 59.241 50.000 0.00 0.00 41.10 3.16
179 191 1.140852 TCACAGTGTAGCAGCCACTTT 59.859 47.619 0.00 0.00 41.10 2.66
180 192 1.949525 CACAGTGTAGCAGCCACTTTT 59.050 47.619 0.00 0.00 41.10 2.27
181 193 2.031682 CACAGTGTAGCAGCCACTTTTC 60.032 50.000 0.00 0.00 41.10 2.29
182 194 2.158755 ACAGTGTAGCAGCCACTTTTCT 60.159 45.455 0.00 0.00 41.10 2.52
183 195 2.481952 CAGTGTAGCAGCCACTTTTCTC 59.518 50.000 1.78 0.00 41.10 2.87
184 196 2.104792 AGTGTAGCAGCCACTTTTCTCA 59.895 45.455 0.00 0.00 40.14 3.27
185 197 2.878406 GTGTAGCAGCCACTTTTCTCAA 59.122 45.455 0.00 0.00 0.00 3.02
186 198 3.315191 GTGTAGCAGCCACTTTTCTCAAA 59.685 43.478 0.00 0.00 0.00 2.69
199 211 0.478072 TCTCAAAGTGCCACACCCAT 59.522 50.000 0.00 0.00 34.49 4.00
224 236 6.946583 TCTATCTTGTACCTCACTTGTACAGT 59.053 38.462 0.00 0.00 46.53 3.55
274 286 5.630121 TGAATTGGTAAACACACCTCTGAT 58.370 37.500 0.00 0.00 39.50 2.90
275 287 6.774673 TGAATTGGTAAACACACCTCTGATA 58.225 36.000 0.00 0.00 39.50 2.15
276 288 6.878923 TGAATTGGTAAACACACCTCTGATAG 59.121 38.462 0.00 0.00 39.50 2.08
314 326 0.541392 TCTTGCGGCTGTATGGTCAT 59.459 50.000 0.00 0.00 0.00 3.06
317 329 2.238942 TGCGGCTGTATGGTCATTAG 57.761 50.000 0.00 0.00 0.00 1.73
318 330 1.202639 TGCGGCTGTATGGTCATTAGG 60.203 52.381 0.00 0.00 0.00 2.69
319 331 1.070134 GCGGCTGTATGGTCATTAGGA 59.930 52.381 0.00 0.00 0.00 2.94
320 332 2.868044 GCGGCTGTATGGTCATTAGGAG 60.868 54.545 0.00 0.00 0.00 3.69
353 366 2.110011 AGCAAAGGTGGATTGGTTACCT 59.890 45.455 2.07 0.00 46.38 3.08
369 382 2.463514 CCTGGCATCCATAGGGGCA 61.464 63.158 0.00 0.00 36.21 5.36
375 388 1.392589 CATCCATAGGGGCACAACAC 58.607 55.000 0.00 0.00 36.21 3.32
378 391 0.107214 CCATAGGGGCACAACACGAT 60.107 55.000 0.00 0.00 0.00 3.73
399 412 3.855668 TGTCCCTTGGAATCCAATTGTT 58.144 40.909 15.91 0.00 43.07 2.83
448 462 3.496870 GCCAATTCTCCGTATCAATCCCT 60.497 47.826 0.00 0.00 0.00 4.20
475 489 5.008331 TGAGTACATCACGTCCTTCTACTT 58.992 41.667 0.00 0.00 31.12 2.24
486 500 3.130340 GTCCTTCTACTTCTGCTCTCCAG 59.870 52.174 0.00 0.00 43.17 3.86
531 545 4.157289 AGTTCTGCATTCAAAATCGAGCAT 59.843 37.500 0.00 0.00 0.00 3.79
580 612 4.627467 CGAGTGATTCTGGGTTTTGTAGAG 59.373 45.833 0.00 0.00 0.00 2.43
581 613 5.566826 CGAGTGATTCTGGGTTTTGTAGAGA 60.567 44.000 0.00 0.00 0.00 3.10
584 616 4.943705 TGATTCTGGGTTTTGTAGAGATGC 59.056 41.667 0.00 0.00 0.00 3.91
589 621 1.398390 GGTTTTGTAGAGATGCGCCAG 59.602 52.381 4.18 0.00 0.00 4.85
601 633 2.399356 GCGCCAGACCTGTTTAGCC 61.399 63.158 0.00 0.00 0.00 3.93
707 743 5.913137 TTTTGAGAAACAACCATGACACT 57.087 34.783 0.00 0.00 38.29 3.55
708 744 7.397892 TTTTTGAGAAACAACCATGACACTA 57.602 32.000 0.00 0.00 38.29 2.74
709 745 6.618287 TTTGAGAAACAACCATGACACTAG 57.382 37.500 0.00 0.00 38.29 2.57
725 761 6.282930 TGACACTAGTTTACACCCACTAAAC 58.717 40.000 0.00 0.00 35.25 2.01
729 765 3.999046 AGTTTACACCCACTAAACGAGG 58.001 45.455 0.00 0.00 38.56 4.63
731 767 4.588528 AGTTTACACCCACTAAACGAGGTA 59.411 41.667 0.00 0.00 38.56 3.08
732 768 4.519540 TTACACCCACTAAACGAGGTAC 57.480 45.455 0.00 0.00 0.00 3.34
766 802 6.963049 TGAGAAAATCTAAAAGAGGTACGC 57.037 37.500 0.00 0.00 0.00 4.42
785 859 3.892918 GCACTATTGCTAGATTGCCAG 57.107 47.619 0.00 0.00 46.17 4.85
787 861 3.813443 CACTATTGCTAGATTGCCAGGT 58.187 45.455 0.00 0.00 0.00 4.00
788 862 4.202441 CACTATTGCTAGATTGCCAGGTT 58.798 43.478 0.00 0.00 0.00 3.50
808 882 4.889427 GCCAAGAAAACGGGCATC 57.111 55.556 0.00 0.00 46.92 3.91
809 883 1.154035 GCCAAGAAAACGGGCATCG 60.154 57.895 0.00 0.00 46.92 3.84
812 886 1.401018 CCAAGAAAACGGGCATCGAAC 60.401 52.381 5.71 0.00 42.43 3.95
813 887 0.879090 AAGAAAACGGGCATCGAACC 59.121 50.000 5.71 0.00 42.43 3.62
816 890 0.525761 AAAACGGGCATCGAACCATG 59.474 50.000 9.79 4.43 42.43 3.66
862 1546 1.203389 TCTAGGCCCAGTTTACACCCT 60.203 52.381 0.00 0.00 0.00 4.34
871 1590 3.165875 CAGTTTACACCCTCCAGAGAGA 58.834 50.000 0.00 0.00 43.39 3.10
873 1592 3.076182 AGTTTACACCCTCCAGAGAGAGA 59.924 47.826 0.00 0.00 43.39 3.10
874 1593 3.374042 TTACACCCTCCAGAGAGAGAG 57.626 52.381 0.00 0.00 43.39 3.20
877 1596 4.275781 CCTCCAGAGAGAGAGGGC 57.724 66.667 0.00 0.00 45.08 5.19
878 1597 1.309347 CCTCCAGAGAGAGAGGGCA 59.691 63.158 0.00 0.00 45.08 5.36
879 1598 1.042559 CCTCCAGAGAGAGAGGGCAC 61.043 65.000 0.00 0.00 45.08 5.01
880 1599 1.379176 TCCAGAGAGAGAGGGCACG 60.379 63.158 0.00 0.00 0.00 5.34
882 1601 1.383456 CCAGAGAGAGAGGGCACGAG 61.383 65.000 0.00 0.00 0.00 4.18
883 1602 0.679640 CAGAGAGAGAGGGCACGAGT 60.680 60.000 0.00 0.00 0.00 4.18
924 1651 1.985116 GTCGCAGTCTCCCTTCCCT 60.985 63.158 0.00 0.00 0.00 4.20
925 1652 1.682684 TCGCAGTCTCCCTTCCCTC 60.683 63.158 0.00 0.00 0.00 4.30
974 1727 3.590182 CCTAGGGTTTTACTTTCCCCTCA 59.410 47.826 0.00 0.00 44.33 3.86
1139 1952 9.859427 TTTGCCTCACATTTCAAAGATAATAAG 57.141 29.630 0.00 0.00 0.00 1.73
1173 2289 2.227968 CTTTCTTGCTCGTTCGGCCG 62.228 60.000 22.12 22.12 0.00 6.13
1200 2316 2.738521 CGTGTTCCGCTGAGGTGG 60.739 66.667 0.00 0.00 44.01 4.61
1201 2317 2.426023 GTGTTCCGCTGAGGTGGT 59.574 61.111 0.00 0.00 43.20 4.16
1202 2318 1.961277 GTGTTCCGCTGAGGTGGTG 60.961 63.158 0.00 0.00 43.20 4.17
1203 2319 2.358737 GTTCCGCTGAGGTGGTGG 60.359 66.667 0.00 0.00 43.20 4.61
1204 2320 2.847234 TTCCGCTGAGGTGGTGGT 60.847 61.111 0.00 0.00 43.20 4.16
1205 2321 3.177194 TTCCGCTGAGGTGGTGGTG 62.177 63.158 0.00 0.00 43.20 4.17
1206 2322 3.941188 CCGCTGAGGTGGTGGTGT 61.941 66.667 0.00 0.00 38.25 4.16
1207 2323 2.666190 CGCTGAGGTGGTGGTGTG 60.666 66.667 0.00 0.00 0.00 3.82
1208 2324 2.281761 GCTGAGGTGGTGGTGTGG 60.282 66.667 0.00 0.00 0.00 4.17
1209 2325 3.120086 GCTGAGGTGGTGGTGTGGT 62.120 63.158 0.00 0.00 0.00 4.16
1245 2375 0.960861 TCTCGTCTGTCCATGTCGCT 60.961 55.000 0.00 0.00 0.00 4.93
1317 2501 2.901192 TGTATCCTCCCAGTTTTCACGA 59.099 45.455 0.00 0.00 0.00 4.35
1360 2544 1.152368 CCAGGCCTCCATGAATCCC 59.848 63.158 0.00 0.00 0.00 3.85
1430 2641 6.012858 TCCAGCTAGGAGTTTAATTTTCAGGA 60.013 38.462 1.25 0.00 43.07 3.86
1431 2654 6.659242 CCAGCTAGGAGTTTAATTTTCAGGAA 59.341 38.462 0.00 0.00 41.22 3.36
1453 2676 4.792068 ACAACCTTTGATCTTTCTGGTCA 58.208 39.130 0.00 0.00 0.00 4.02
1466 2689 5.470098 TCTTTCTGGTCATAACTTTGCTGTC 59.530 40.000 0.00 0.00 0.00 3.51
1554 2804 2.861462 GAGCGATCTCTAGTGTTGCT 57.139 50.000 0.00 8.12 36.42 3.91
1668 2930 1.620323 GTGGAAATCAGGCCTTGCTTT 59.380 47.619 0.00 2.62 0.00 3.51
1710 2973 7.361971 GGAAGTCGATTAGTAGCCTAAGTATCC 60.362 44.444 0.00 0.00 36.63 2.59
1752 3028 5.762045 CTTTATGGCATATTTCCTGTTCCG 58.238 41.667 8.24 0.00 0.00 4.30
1812 3165 4.926832 GTCAAAGCAGAGAGTAGTTCCTTC 59.073 45.833 0.00 0.00 0.00 3.46
1891 3258 5.240844 TCTTGCGCTGATGCTACTTAGTATA 59.759 40.000 9.73 0.00 36.97 1.47
1895 3262 5.402398 CGCTGATGCTACTTAGTATATGCA 58.598 41.667 7.15 7.15 36.97 3.96
1901 3268 8.588472 TGATGCTACTTAGTATATGCAGACATT 58.412 33.333 9.90 0.00 37.74 2.71
1933 3301 7.042658 GCTGGAAAGATAATACTGTCGGTAAAG 60.043 40.741 0.00 0.00 33.74 1.85
1936 3304 7.977853 GGAAAGATAATACTGTCGGTAAAGTGA 59.022 37.037 0.00 0.00 33.74 3.41
2122 3533 5.048153 ACGACGATGAATACGATGATGAT 57.952 39.130 0.00 0.00 34.70 2.45
2127 3538 6.393171 ACGATGAATACGATGATGATGATGT 58.607 36.000 0.00 0.00 34.70 3.06
2144 3555 4.857679 TGATGTGGATGAAATGGATGACA 58.142 39.130 0.00 0.00 0.00 3.58
2163 3574 4.943093 TGACAATGATGTTGAGGGTATGTG 59.057 41.667 0.00 0.00 40.74 3.21
2166 3577 3.912496 TGATGTTGAGGGTATGTGGAG 57.088 47.619 0.00 0.00 0.00 3.86
2167 3578 2.505407 TGATGTTGAGGGTATGTGGAGG 59.495 50.000 0.00 0.00 0.00 4.30
2183 3594 3.323979 GTGGAGGTTCTGTAGTTCCTTCA 59.676 47.826 0.00 0.00 33.68 3.02
2209 3636 8.594881 ATTCAGTTCAAGTAGACACTTAGTTG 57.405 34.615 0.00 0.00 43.30 3.16
2254 3682 6.889198 TGTAATGCTGCCTTCTAAGTTCTAT 58.111 36.000 0.00 0.00 0.00 1.98
2331 3778 9.941325 ATGTTGCTTATGGATTATTTTGTTTCA 57.059 25.926 0.00 0.00 0.00 2.69
2395 3845 5.739752 TCTGATTTGTTCCGCAATGATAG 57.260 39.130 0.00 0.00 36.89 2.08
2396 3846 5.427378 TCTGATTTGTTCCGCAATGATAGA 58.573 37.500 0.00 0.00 36.89 1.98
2521 3976 2.745281 TCGCTATGCCTTTGTGGTTTAC 59.255 45.455 0.00 0.00 38.35 2.01
2563 4022 9.706691 AACCGTATCATATTCACTTATTACTGG 57.293 33.333 0.00 0.00 0.00 4.00
2775 4238 6.767524 TGCAAGTATAATTTTGGTAGGTGG 57.232 37.500 0.00 0.00 0.00 4.61
2901 4386 5.478233 TTCCAAAATCGACAATGGATACG 57.522 39.130 13.76 0.00 41.36 3.06
2913 4398 4.695455 ACAATGGATACGAACAAGACTTGG 59.305 41.667 19.16 4.43 42.51 3.61
2997 4490 4.949856 ACACTTCCCATTTTCAGCGATTAT 59.050 37.500 0.00 0.00 0.00 1.28
3413 4920 3.288964 GGAGATCAAGTTCGAGGACCTA 58.711 50.000 0.00 0.00 0.00 3.08
3455 4965 1.601759 GGCAGAGCAGTTCAAGGCA 60.602 57.895 0.00 0.00 0.00 4.75
3544 5054 2.805353 CGAGACGGGCGTTGACAG 60.805 66.667 0.00 0.00 0.00 3.51
3697 5211 3.714798 GTTGTGTCCTGATAATAGGGGGA 59.285 47.826 0.00 0.00 38.42 4.81
3727 5243 1.872952 TGCTGTCTTTTGGTCATGTCG 59.127 47.619 0.00 0.00 0.00 4.35
3750 5273 2.679355 TGAATGTTGCAGTTGCGTAC 57.321 45.000 0.00 1.44 45.83 3.67
3762 5285 1.203994 GTTGCGTACTTGGAGGCTCTA 59.796 52.381 15.23 5.21 0.00 2.43
3805 5330 7.768120 TGAAAGTATTTTGGAGCATGTTGTTTT 59.232 29.630 0.00 0.00 39.27 2.43
3822 5371 3.390639 TGTTTTGGATGAATGCCACCTTT 59.609 39.130 0.00 0.00 34.56 3.11
3863 5415 2.550606 TGGAGGCGTTTAAACATGTGAC 59.449 45.455 18.07 4.07 0.00 3.67
4006 5568 4.699925 AACTAACTACAGCCCTTGTGAA 57.300 40.909 0.00 0.00 41.10 3.18
4023 5585 6.536224 CCTTGTGAAATTTTGAGACAGCTTTT 59.464 34.615 0.00 0.00 0.00 2.27
4024 5586 6.890663 TGTGAAATTTTGAGACAGCTTTTG 57.109 33.333 0.00 0.00 0.00 2.44
4098 5660 3.552132 TCGGCCTGTTTATGCTTATGA 57.448 42.857 0.00 0.00 0.00 2.15
4297 5859 9.138992 CTTTGGTGCAAATTCTTGGAGATACCA 62.139 40.741 0.00 0.00 38.59 3.25
4309 5871 5.476950 TGGAGATACCACTACTAGGGAAA 57.523 43.478 0.00 0.00 44.64 3.13
4310 5872 5.845734 TGGAGATACCACTACTAGGGAAAA 58.154 41.667 0.00 0.00 44.64 2.29
4311 5873 5.897824 TGGAGATACCACTACTAGGGAAAAG 59.102 44.000 0.00 0.00 44.64 2.27
4312 5874 5.221481 GGAGATACCACTACTAGGGAAAAGC 60.221 48.000 0.00 0.00 38.79 3.51
4313 5875 4.654724 AGATACCACTACTAGGGAAAAGCC 59.345 45.833 0.00 0.00 0.00 4.35
4314 5876 2.917205 ACCACTACTAGGGAAAAGCCT 58.083 47.619 0.00 0.00 36.66 4.58
4315 5877 4.070681 ACCACTACTAGGGAAAAGCCTA 57.929 45.455 0.00 0.00 36.66 3.93
4316 5878 4.632292 ACCACTACTAGGGAAAAGCCTAT 58.368 43.478 0.00 0.00 36.66 2.57
4317 5879 5.785123 ACCACTACTAGGGAAAAGCCTATA 58.215 41.667 0.00 0.00 36.66 1.31
4318 5880 5.601729 ACCACTACTAGGGAAAAGCCTATAC 59.398 44.000 0.00 0.00 36.66 1.47
4319 5881 5.601313 CCACTACTAGGGAAAAGCCTATACA 59.399 44.000 0.00 0.00 36.66 2.29
4320 5882 6.462628 CCACTACTAGGGAAAAGCCTATACAC 60.463 46.154 0.00 0.00 36.66 2.90
4321 5883 6.097839 CACTACTAGGGAAAAGCCTATACACA 59.902 42.308 0.00 0.00 36.66 3.72
4322 5884 6.670902 ACTACTAGGGAAAAGCCTATACACAA 59.329 38.462 0.00 0.00 36.66 3.33
4323 5885 6.382919 ACTAGGGAAAAGCCTATACACAAA 57.617 37.500 0.00 0.00 36.66 2.83
4324 5886 6.786122 ACTAGGGAAAAGCCTATACACAAAA 58.214 36.000 0.00 0.00 36.66 2.44
4325 5887 7.235804 ACTAGGGAAAAGCCTATACACAAAAA 58.764 34.615 0.00 0.00 36.66 1.94
4326 5888 6.590234 AGGGAAAAGCCTATACACAAAAAG 57.410 37.500 0.00 0.00 36.66 2.27
4327 5889 6.075315 AGGGAAAAGCCTATACACAAAAAGT 58.925 36.000 0.00 0.00 36.66 2.66
4328 5890 6.553476 AGGGAAAAGCCTATACACAAAAAGTT 59.447 34.615 0.00 0.00 36.66 2.66
4329 5891 7.726738 AGGGAAAAGCCTATACACAAAAAGTTA 59.273 33.333 0.00 0.00 36.66 2.24
4330 5892 7.811236 GGGAAAAGCCTATACACAAAAAGTTAC 59.189 37.037 0.00 0.00 36.66 2.50
4331 5893 8.573885 GGAAAAGCCTATACACAAAAAGTTACT 58.426 33.333 0.00 0.00 0.00 2.24
4334 5896 9.788889 AAAGCCTATACACAAAAAGTTACTAGT 57.211 29.630 0.00 0.00 0.00 2.57
4337 5899 8.815189 GCCTATACACAAAAAGTTACTAGTAGC 58.185 37.037 8.59 8.59 0.00 3.58
4338 5900 9.017669 CCTATACACAAAAAGTTACTAGTAGCG 57.982 37.037 10.65 0.02 0.00 4.26
4339 5901 9.778993 CTATACACAAAAAGTTACTAGTAGCGA 57.221 33.333 10.65 0.00 0.00 4.93
4340 5902 8.684973 ATACACAAAAAGTTACTAGTAGCGAG 57.315 34.615 10.65 4.00 0.00 5.03
4341 5903 5.924825 ACACAAAAAGTTACTAGTAGCGAGG 59.075 40.000 10.65 3.98 0.00 4.63
4342 5904 5.347907 CACAAAAAGTTACTAGTAGCGAGGG 59.652 44.000 10.65 4.58 0.00 4.30
4343 5905 5.011431 ACAAAAAGTTACTAGTAGCGAGGGT 59.989 40.000 10.65 5.11 0.00 4.34
4344 5906 5.735285 AAAAGTTACTAGTAGCGAGGGTT 57.265 39.130 10.65 0.00 0.00 4.11
4345 5907 6.840780 AAAAGTTACTAGTAGCGAGGGTTA 57.159 37.500 10.65 0.00 0.00 2.85
4346 5908 6.840780 AAAGTTACTAGTAGCGAGGGTTAA 57.159 37.500 10.65 0.00 0.00 2.01
4347 5909 6.840780 AAGTTACTAGTAGCGAGGGTTAAA 57.159 37.500 10.65 0.00 0.00 1.52
4348 5910 6.840780 AGTTACTAGTAGCGAGGGTTAAAA 57.159 37.500 10.65 0.00 0.00 1.52
4349 5911 7.232118 AGTTACTAGTAGCGAGGGTTAAAAA 57.768 36.000 10.65 0.00 0.00 1.94
4350 5912 7.093354 AGTTACTAGTAGCGAGGGTTAAAAAC 58.907 38.462 10.65 0.01 0.00 2.43
4362 5924 2.161012 GGTTAAAAACCCTCGCTACTGC 59.839 50.000 0.00 0.00 46.12 4.40
4363 5925 3.072211 GTTAAAAACCCTCGCTACTGCT 58.928 45.455 0.00 0.00 36.97 4.24
4364 5926 4.248058 GTTAAAAACCCTCGCTACTGCTA 58.752 43.478 0.00 0.00 36.97 3.49
4365 5927 2.381725 AAAACCCTCGCTACTGCTAC 57.618 50.000 0.00 0.00 36.97 3.58
4366 5928 1.558233 AAACCCTCGCTACTGCTACT 58.442 50.000 0.00 0.00 36.97 2.57
4367 5929 1.558233 AACCCTCGCTACTGCTACTT 58.442 50.000 0.00 0.00 36.97 2.24
4368 5930 2.431954 ACCCTCGCTACTGCTACTTA 57.568 50.000 0.00 0.00 36.97 2.24
4369 5931 2.022934 ACCCTCGCTACTGCTACTTAC 58.977 52.381 0.00 0.00 36.97 2.34
4370 5932 1.337387 CCCTCGCTACTGCTACTTACC 59.663 57.143 0.00 0.00 36.97 2.85
4371 5933 2.022195 CCTCGCTACTGCTACTTACCA 58.978 52.381 0.00 0.00 36.97 3.25
4372 5934 2.033550 CCTCGCTACTGCTACTTACCAG 59.966 54.545 0.00 0.00 36.97 4.00
4373 5935 2.683867 CTCGCTACTGCTACTTACCAGT 59.316 50.000 0.00 0.00 44.02 4.00
4374 5936 3.875727 CTCGCTACTGCTACTTACCAGTA 59.124 47.826 0.00 0.00 42.02 2.74
4380 5942 3.546407 CTACTTACCAGTAGCGCGG 57.454 57.895 8.83 0.00 44.85 6.46
4381 5943 0.030369 CTACTTACCAGTAGCGCGGG 59.970 60.000 8.83 1.71 44.85 6.13
4382 5944 2.620996 CTACTTACCAGTAGCGCGGGT 61.621 57.143 8.83 17.59 44.85 5.28
4383 5945 1.217244 CTTACCAGTAGCGCGGGTT 59.783 57.895 18.42 0.00 43.15 4.11
4384 5946 0.390735 CTTACCAGTAGCGCGGGTTT 60.391 55.000 18.42 0.00 43.15 3.27
4385 5947 0.035176 TTACCAGTAGCGCGGGTTTT 59.965 50.000 18.42 0.00 43.15 2.43
4386 5948 0.035176 TACCAGTAGCGCGGGTTTTT 59.965 50.000 18.42 0.00 43.15 1.94
4387 5949 0.035176 ACCAGTAGCGCGGGTTTTTA 59.965 50.000 8.83 0.00 43.15 1.52
4388 5950 1.158434 CCAGTAGCGCGGGTTTTTAA 58.842 50.000 8.83 0.00 0.00 1.52
4389 5951 1.536331 CCAGTAGCGCGGGTTTTTAAA 59.464 47.619 8.83 0.00 0.00 1.52
4390 5952 2.577450 CAGTAGCGCGGGTTTTTAAAC 58.423 47.619 8.83 0.00 38.17 2.01
4406 5968 8.526218 GTTTTTAAACCTCGCTACTACTAAGT 57.474 34.615 0.00 0.00 34.95 2.24
4407 5969 8.982685 GTTTTTAAACCTCGCTACTACTAAGTT 58.017 33.333 0.00 0.00 33.62 2.66
4408 5970 8.524870 TTTTAAACCTCGCTACTACTAAGTTG 57.475 34.615 0.00 0.00 37.15 3.16
4409 5971 5.972107 AAACCTCGCTACTACTAAGTTGA 57.028 39.130 0.00 0.00 37.15 3.18
4410 5972 6.527057 AAACCTCGCTACTACTAAGTTGAT 57.473 37.500 0.00 0.00 37.15 2.57
4411 5973 7.636150 AAACCTCGCTACTACTAAGTTGATA 57.364 36.000 0.00 0.00 37.15 2.15
4412 5974 6.864360 ACCTCGCTACTACTAAGTTGATAG 57.136 41.667 0.00 0.00 37.15 2.08
4413 5975 5.239087 ACCTCGCTACTACTAAGTTGATAGC 59.761 44.000 0.00 0.00 37.15 2.97
4414 5976 5.238868 CCTCGCTACTACTAAGTTGATAGCA 59.761 44.000 0.00 0.00 34.56 3.49
4415 5977 6.301687 TCGCTACTACTAAGTTGATAGCAG 57.698 41.667 0.00 0.00 34.56 4.24
4416 5978 4.912766 CGCTACTACTAAGTTGATAGCAGC 59.087 45.833 9.09 9.09 34.56 5.25
4417 5979 5.505819 CGCTACTACTAAGTTGATAGCAGCA 60.506 44.000 15.45 0.00 34.56 4.41
4418 5980 5.918011 GCTACTACTAAGTTGATAGCAGCAG 59.082 44.000 12.37 0.00 34.87 4.24
4419 5981 4.688021 ACTACTAAGTTGATAGCAGCAGC 58.312 43.478 0.00 0.00 34.52 5.25
4420 5982 4.734989 ACTACTAAGTTGATAGCAGCAGCG 60.735 45.833 0.00 0.00 38.25 5.18
4421 5983 8.861834 TACTACTAAGTTGATAGCAGCAGCGC 62.862 46.154 0.00 0.00 40.65 5.92
4429 5991 2.028043 GCAGCAGCGCAGGTTTTT 59.972 55.556 11.47 0.00 33.74 1.94
4430 5992 1.285641 GCAGCAGCGCAGGTTTTTA 59.714 52.632 11.47 0.00 33.74 1.52
4431 5993 0.318614 GCAGCAGCGCAGGTTTTTAA 60.319 50.000 11.47 0.00 33.74 1.52
4432 5994 1.408422 CAGCAGCGCAGGTTTTTAAC 58.592 50.000 11.47 0.00 33.74 2.01
4445 6007 4.825422 GGTTTTTAACCCTCGCTACTACT 58.175 43.478 0.00 0.00 46.12 2.57
4446 6008 5.965922 GGTTTTTAACCCTCGCTACTACTA 58.034 41.667 0.00 0.00 46.12 1.82
4447 6009 6.398095 GGTTTTTAACCCTCGCTACTACTAA 58.602 40.000 0.00 0.00 46.12 2.24
4448 6010 6.533012 GGTTTTTAACCCTCGCTACTACTAAG 59.467 42.308 0.00 0.00 46.12 2.18
4449 6011 4.907879 TTAACCCTCGCTACTACTAAGC 57.092 45.455 0.00 0.00 36.60 3.09
4458 6020 4.730600 GCTACTACTAAGCGGTCTCTAC 57.269 50.000 0.00 0.00 0.00 2.59
4459 6021 3.498018 GCTACTACTAAGCGGTCTCTACC 59.502 52.174 0.00 0.00 42.95 3.18
4467 6029 3.468140 GGTCTCTACCGTGCCCCC 61.468 72.222 0.00 0.00 35.62 5.40
4481 6043 3.979738 CCCCCGGGACATGTCATA 58.020 61.111 26.32 0.00 37.50 2.15
4482 6044 1.754745 CCCCCGGGACATGTCATAG 59.245 63.158 26.32 16.02 37.50 2.23
4483 6045 1.054406 CCCCCGGGACATGTCATAGT 61.054 60.000 26.32 0.00 37.50 2.12
4484 6046 1.712056 CCCCGGGACATGTCATAGTA 58.288 55.000 26.32 0.00 0.00 1.82
4485 6047 1.618837 CCCCGGGACATGTCATAGTAG 59.381 57.143 26.32 9.96 0.00 2.57
4486 6048 2.317040 CCCGGGACATGTCATAGTAGT 58.683 52.381 26.47 0.00 0.00 2.73
4487 6049 3.493334 CCCGGGACATGTCATAGTAGTA 58.507 50.000 26.47 0.00 0.00 1.82
4488 6050 3.506455 CCCGGGACATGTCATAGTAGTAG 59.494 52.174 26.47 6.89 0.00 2.57
4489 6051 3.057456 CCGGGACATGTCATAGTAGTAGC 60.057 52.174 26.47 5.60 0.00 3.58
4490 6052 3.365064 CGGGACATGTCATAGTAGTAGCG 60.365 52.174 26.47 0.00 0.00 4.26
4491 6053 3.566523 GGACATGTCATAGTAGTAGCGC 58.433 50.000 26.47 0.00 0.00 5.92
4492 6054 3.227147 GACATGTCATAGTAGTAGCGCG 58.773 50.000 21.07 0.00 0.00 6.86
4493 6055 2.031069 ACATGTCATAGTAGTAGCGCGG 60.031 50.000 8.83 0.00 0.00 6.46
4494 6056 0.949397 TGTCATAGTAGTAGCGCGGG 59.051 55.000 8.83 0.00 0.00 6.13
4495 6057 0.950116 GTCATAGTAGTAGCGCGGGT 59.050 55.000 8.83 0.00 0.00 5.28
4496 6058 1.336125 GTCATAGTAGTAGCGCGGGTT 59.664 52.381 8.83 0.00 0.00 4.11
4497 6059 1.605710 TCATAGTAGTAGCGCGGGTTC 59.394 52.381 8.83 0.00 0.00 3.62
4498 6060 1.335810 CATAGTAGTAGCGCGGGTTCA 59.664 52.381 8.83 0.00 0.00 3.18
4499 6061 1.683943 TAGTAGTAGCGCGGGTTCAT 58.316 50.000 8.83 0.00 0.00 2.57
4500 6062 0.384669 AGTAGTAGCGCGGGTTCATC 59.615 55.000 8.83 0.00 0.00 2.92
4501 6063 0.596859 GTAGTAGCGCGGGTTCATCC 60.597 60.000 8.83 0.00 0.00 3.51
4502 6064 1.038681 TAGTAGCGCGGGTTCATCCA 61.039 55.000 8.83 0.00 38.11 3.41
4503 6065 1.448893 GTAGCGCGGGTTCATCCAA 60.449 57.895 8.83 0.00 38.11 3.53
4504 6066 1.022451 GTAGCGCGGGTTCATCCAAA 61.022 55.000 8.83 0.00 38.11 3.28
4505 6067 0.107410 TAGCGCGGGTTCATCCAAAT 60.107 50.000 8.83 0.00 38.11 2.32
4506 6068 0.965363 AGCGCGGGTTCATCCAAATT 60.965 50.000 8.83 0.00 38.11 1.82
4507 6069 0.108851 GCGCGGGTTCATCCAAATTT 60.109 50.000 8.83 0.00 38.11 1.82
4508 6070 1.133407 GCGCGGGTTCATCCAAATTTA 59.867 47.619 8.83 0.00 38.11 1.40
4509 6071 2.416162 GCGCGGGTTCATCCAAATTTAA 60.416 45.455 8.83 0.00 38.11 1.52
4510 6072 3.175929 CGCGGGTTCATCCAAATTTAAC 58.824 45.455 0.00 0.00 38.11 2.01
4511 6073 3.175929 GCGGGTTCATCCAAATTTAACG 58.824 45.455 0.00 0.00 38.11 3.18
4512 6074 3.765026 CGGGTTCATCCAAATTTAACGG 58.235 45.455 0.00 0.00 38.11 4.44
4513 6075 3.428316 CGGGTTCATCCAAATTTAACGGG 60.428 47.826 0.00 0.00 38.11 5.28
4514 6076 3.118920 GGGTTCATCCAAATTTAACGGGG 60.119 47.826 0.00 0.00 38.11 5.73
4515 6077 3.118920 GGTTCATCCAAATTTAACGGGGG 60.119 47.826 0.00 0.00 35.97 5.40
4516 6078 3.741245 TCATCCAAATTTAACGGGGGA 57.259 42.857 0.00 0.00 0.00 4.81
4517 6079 4.048970 TCATCCAAATTTAACGGGGGAA 57.951 40.909 0.00 0.00 0.00 3.97
4518 6080 3.764972 TCATCCAAATTTAACGGGGGAAC 59.235 43.478 0.00 0.00 0.00 3.62
4535 6097 4.587584 GGAACCCCGTTAAACATTTTCA 57.412 40.909 0.00 0.00 0.00 2.69
4536 6098 4.946445 GGAACCCCGTTAAACATTTTCAA 58.054 39.130 0.00 0.00 0.00 2.69
4537 6099 5.358090 GGAACCCCGTTAAACATTTTCAAA 58.642 37.500 0.00 0.00 0.00 2.69
4538 6100 5.816258 GGAACCCCGTTAAACATTTTCAAAA 59.184 36.000 0.00 0.00 0.00 2.44
4539 6101 6.483974 GGAACCCCGTTAAACATTTTCAAAAT 59.516 34.615 0.00 0.00 0.00 1.82
4540 6102 7.307514 GGAACCCCGTTAAACATTTTCAAAATC 60.308 37.037 0.00 0.00 0.00 2.17
4541 6103 5.992829 ACCCCGTTAAACATTTTCAAAATCC 59.007 36.000 0.00 0.00 0.00 3.01
4542 6104 6.183361 ACCCCGTTAAACATTTTCAAAATCCT 60.183 34.615 0.00 0.00 0.00 3.24
4543 6105 6.367695 CCCCGTTAAACATTTTCAAAATCCTC 59.632 38.462 0.00 0.00 0.00 3.71
4544 6106 6.926272 CCCGTTAAACATTTTCAAAATCCTCA 59.074 34.615 0.00 0.00 0.00 3.86
4545 6107 7.439655 CCCGTTAAACATTTTCAAAATCCTCAA 59.560 33.333 0.00 0.00 0.00 3.02
4546 6108 8.821894 CCGTTAAACATTTTCAAAATCCTCAAA 58.178 29.630 0.00 0.00 0.00 2.69
4551 6113 8.806429 AACATTTTCAAAATCCTCAAAAACCT 57.194 26.923 0.00 0.00 0.00 3.50
4552 6114 9.898152 AACATTTTCAAAATCCTCAAAAACCTA 57.102 25.926 0.00 0.00 0.00 3.08
4553 6115 9.898152 ACATTTTCAAAATCCTCAAAAACCTAA 57.102 25.926 0.00 0.00 0.00 2.69
4555 6117 9.898152 ATTTTCAAAATCCTCAAAAACCTAACA 57.102 25.926 0.00 0.00 0.00 2.41
4556 6118 8.940768 TTTCAAAATCCTCAAAAACCTAACAG 57.059 30.769 0.00 0.00 0.00 3.16
4557 6119 7.889873 TCAAAATCCTCAAAAACCTAACAGA 57.110 32.000 0.00 0.00 0.00 3.41
4558 6120 7.712797 TCAAAATCCTCAAAAACCTAACAGAC 58.287 34.615 0.00 0.00 0.00 3.51
4559 6121 7.340743 TCAAAATCCTCAAAAACCTAACAGACA 59.659 33.333 0.00 0.00 0.00 3.41
4560 6122 7.654022 AAATCCTCAAAAACCTAACAGACAA 57.346 32.000 0.00 0.00 0.00 3.18
4561 6123 7.654022 AATCCTCAAAAACCTAACAGACAAA 57.346 32.000 0.00 0.00 0.00 2.83
4562 6124 7.654022 ATCCTCAAAAACCTAACAGACAAAA 57.346 32.000 0.00 0.00 0.00 2.44
4563 6125 7.469537 TCCTCAAAAACCTAACAGACAAAAA 57.530 32.000 0.00 0.00 0.00 1.94
4564 6126 7.543756 TCCTCAAAAACCTAACAGACAAAAAG 58.456 34.615 0.00 0.00 0.00 2.27
4565 6127 7.177744 TCCTCAAAAACCTAACAGACAAAAAGT 59.822 33.333 0.00 0.00 0.00 2.66
4566 6128 7.817478 CCTCAAAAACCTAACAGACAAAAAGTT 59.183 33.333 0.00 0.00 0.00 2.66
4567 6129 9.849166 CTCAAAAACCTAACAGACAAAAAGTTA 57.151 29.630 0.00 0.00 0.00 2.24
4568 6130 9.628746 TCAAAAACCTAACAGACAAAAAGTTAC 57.371 29.630 0.00 0.00 0.00 2.50
4569 6131 8.580431 CAAAAACCTAACAGACAAAAAGTTACG 58.420 33.333 0.00 0.00 0.00 3.18
4570 6132 5.996669 ACCTAACAGACAAAAAGTTACGG 57.003 39.130 0.00 0.00 0.00 4.02
4571 6133 4.818005 ACCTAACAGACAAAAAGTTACGGG 59.182 41.667 0.00 0.00 0.00 5.28
4572 6134 4.214758 CCTAACAGACAAAAAGTTACGGGG 59.785 45.833 0.00 0.00 0.00 5.73
4573 6135 1.951602 ACAGACAAAAAGTTACGGGGC 59.048 47.619 0.00 0.00 0.00 5.80
4574 6136 2.227194 CAGACAAAAAGTTACGGGGCT 58.773 47.619 0.00 0.00 0.00 5.19
4575 6137 2.621526 CAGACAAAAAGTTACGGGGCTT 59.378 45.455 0.00 0.00 0.00 4.35
4576 6138 3.067601 CAGACAAAAAGTTACGGGGCTTT 59.932 43.478 0.00 0.00 36.60 3.51
4577 6139 3.702548 AGACAAAAAGTTACGGGGCTTTT 59.297 39.130 7.10 7.10 44.00 2.27
4578 6140 4.888823 AGACAAAAAGTTACGGGGCTTTTA 59.111 37.500 11.50 0.00 42.10 1.52
4579 6141 5.360429 AGACAAAAAGTTACGGGGCTTTTAA 59.640 36.000 11.50 0.00 42.10 1.52
4580 6142 5.593968 ACAAAAAGTTACGGGGCTTTTAAG 58.406 37.500 11.50 10.25 42.10 1.85
4581 6143 5.360429 ACAAAAAGTTACGGGGCTTTTAAGA 59.640 36.000 11.50 0.00 42.10 2.10
4582 6144 6.041182 ACAAAAAGTTACGGGGCTTTTAAGAT 59.959 34.615 11.50 0.00 42.10 2.40
4583 6145 5.892160 AAAGTTACGGGGCTTTTAAGATC 57.108 39.130 0.00 0.00 31.63 2.75
4584 6146 4.838904 AGTTACGGGGCTTTTAAGATCT 57.161 40.909 0.00 0.00 0.00 2.75
4585 6147 5.945144 AGTTACGGGGCTTTTAAGATCTA 57.055 39.130 0.00 0.00 0.00 1.98
4586 6148 5.915175 AGTTACGGGGCTTTTAAGATCTAG 58.085 41.667 0.00 0.00 0.00 2.43
4587 6149 5.659971 AGTTACGGGGCTTTTAAGATCTAGA 59.340 40.000 0.00 0.00 0.00 2.43
4588 6150 4.674281 ACGGGGCTTTTAAGATCTAGAG 57.326 45.455 0.00 0.00 0.00 2.43
4589 6151 4.031611 ACGGGGCTTTTAAGATCTAGAGT 58.968 43.478 0.00 0.00 0.00 3.24
4590 6152 4.141914 ACGGGGCTTTTAAGATCTAGAGTG 60.142 45.833 0.00 0.00 0.00 3.51
4591 6153 4.709250 GGGGCTTTTAAGATCTAGAGTGG 58.291 47.826 0.00 0.00 0.00 4.00
4592 6154 4.409247 GGGGCTTTTAAGATCTAGAGTGGA 59.591 45.833 0.00 0.00 0.00 4.02
4593 6155 5.104485 GGGGCTTTTAAGATCTAGAGTGGAA 60.104 44.000 0.00 0.00 0.00 3.53
4594 6156 6.415573 GGGCTTTTAAGATCTAGAGTGGAAA 58.584 40.000 0.00 0.00 0.00 3.13
4595 6157 6.884836 GGGCTTTTAAGATCTAGAGTGGAAAA 59.115 38.462 0.00 2.47 0.00 2.29
4596 6158 7.393515 GGGCTTTTAAGATCTAGAGTGGAAAAA 59.606 37.037 0.00 1.38 0.00 1.94
4626 6188 7.736447 AAAAATTTCAAACTGTGTGGTCAAA 57.264 28.000 0.00 0.00 0.00 2.69
4627 6189 7.920160 AAAATTTCAAACTGTGTGGTCAAAT 57.080 28.000 0.00 0.00 0.00 2.32
4628 6190 7.920160 AAATTTCAAACTGTGTGGTCAAATT 57.080 28.000 0.00 1.27 0.00 1.82
4629 6191 6.907206 ATTTCAAACTGTGTGGTCAAATTG 57.093 33.333 0.00 0.00 0.00 2.32
4630 6192 5.398603 TTCAAACTGTGTGGTCAAATTGT 57.601 34.783 0.00 0.00 0.00 2.71
4631 6193 4.742417 TCAAACTGTGTGGTCAAATTGTG 58.258 39.130 0.00 0.00 0.00 3.33
4632 6194 3.799281 AACTGTGTGGTCAAATTGTGG 57.201 42.857 0.00 0.00 0.00 4.17
4633 6195 2.733956 ACTGTGTGGTCAAATTGTGGT 58.266 42.857 0.00 0.00 0.00 4.16
4634 6196 2.687935 ACTGTGTGGTCAAATTGTGGTC 59.312 45.455 0.00 0.00 0.00 4.02
4635 6197 2.687425 CTGTGTGGTCAAATTGTGGTCA 59.313 45.455 0.00 0.00 0.00 4.02
4636 6198 3.092301 TGTGTGGTCAAATTGTGGTCAA 58.908 40.909 0.00 0.00 37.98 3.18
4637 6199 3.511540 TGTGTGGTCAAATTGTGGTCAAA 59.488 39.130 0.00 0.00 37.11 2.69
4638 6200 3.862845 GTGTGGTCAAATTGTGGTCAAAC 59.137 43.478 0.00 0.00 37.11 2.93
4639 6201 3.511540 TGTGGTCAAATTGTGGTCAAACA 59.488 39.130 0.00 0.00 37.11 2.83
4640 6202 4.021104 TGTGGTCAAATTGTGGTCAAACAA 60.021 37.500 0.00 0.00 43.82 2.83
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
38 39 7.324935 TCGTGGAAGCTATTATAGAAAACACA 58.675 34.615 3.04 0.00 0.00 3.72
47 48 3.006537 GTGGCCTCGTGGAAGCTATTATA 59.993 47.826 7.92 0.00 34.57 0.98
122 123 5.360144 AGATGATGGTAGCTACAAAGTACGT 59.640 40.000 24.75 7.99 0.00 3.57
136 137 4.584743 AGATCAGCGTACAAGATGATGGTA 59.415 41.667 6.28 0.00 45.87 3.25
138 139 3.986572 GAGATCAGCGTACAAGATGATGG 59.013 47.826 6.28 0.00 45.87 3.51
176 188 2.223805 GGGTGTGGCACTTTGAGAAAAG 60.224 50.000 19.83 0.00 34.40 2.27
177 189 1.754226 GGGTGTGGCACTTTGAGAAAA 59.246 47.619 19.83 0.00 34.40 2.29
178 190 1.341482 TGGGTGTGGCACTTTGAGAAA 60.341 47.619 19.83 0.00 34.40 2.52
179 191 0.257328 TGGGTGTGGCACTTTGAGAA 59.743 50.000 19.83 0.00 34.40 2.87
180 192 0.478072 ATGGGTGTGGCACTTTGAGA 59.522 50.000 19.83 0.00 34.40 3.27
181 193 0.883833 GATGGGTGTGGCACTTTGAG 59.116 55.000 19.83 0.00 34.40 3.02
182 194 0.478072 AGATGGGTGTGGCACTTTGA 59.522 50.000 19.83 0.72 34.40 2.69
183 195 2.198827 TAGATGGGTGTGGCACTTTG 57.801 50.000 19.83 0.00 34.40 2.77
184 196 2.578021 AGATAGATGGGTGTGGCACTTT 59.422 45.455 19.83 0.00 34.40 2.66
185 197 2.200081 AGATAGATGGGTGTGGCACTT 58.800 47.619 19.83 0.00 34.40 3.16
186 198 1.885049 AGATAGATGGGTGTGGCACT 58.115 50.000 19.83 0.00 34.40 4.40
252 264 6.879458 ACTATCAGAGGTGTGTTTACCAATTC 59.121 38.462 0.00 0.00 43.37 2.17
274 286 1.064240 TGGGACATGGAGCGACTACTA 60.064 52.381 0.00 0.00 0.00 1.82
275 287 0.324368 TGGGACATGGAGCGACTACT 60.324 55.000 0.00 0.00 0.00 2.57
276 288 2.199117 TGGGACATGGAGCGACTAC 58.801 57.895 0.00 0.00 0.00 2.73
314 326 1.480954 GCTTGTCACGGATCCTCCTAA 59.519 52.381 10.75 0.00 33.30 2.69
317 329 0.036388 TTGCTTGTCACGGATCCTCC 60.036 55.000 10.75 0.00 0.00 4.30
318 330 1.734465 CTTTGCTTGTCACGGATCCTC 59.266 52.381 10.75 0.00 0.00 3.71
319 331 1.611673 CCTTTGCTTGTCACGGATCCT 60.612 52.381 10.75 0.00 0.00 3.24
320 332 0.804989 CCTTTGCTTGTCACGGATCC 59.195 55.000 0.00 0.00 0.00 3.36
353 366 1.579140 TTGTGCCCCTATGGATGCCA 61.579 55.000 0.00 0.00 38.19 4.92
369 382 0.762418 TCCAAGGGACATCGTGTTGT 59.238 50.000 0.00 0.00 0.00 3.32
375 388 2.418368 TTGGATTCCAAGGGACATCG 57.582 50.000 14.24 0.00 38.75 3.84
399 412 6.291377 GGAGCTTCAACTCATATATGGTCAA 58.709 40.000 12.78 5.94 38.50 3.18
448 462 1.893137 AGGACGTGATGTACTCAAGCA 59.107 47.619 0.00 0.00 36.99 3.91
486 500 3.181440 TGGGTAATCATCCAAGCCAGATC 60.181 47.826 0.00 0.00 35.93 2.75
531 545 8.257306 GGTGCAAGAATTTTATATTTCCCTTCA 58.743 33.333 0.00 0.00 0.00 3.02
580 612 1.009829 CTAAACAGGTCTGGCGCATC 58.990 55.000 10.83 0.00 34.19 3.91
581 613 1.026718 GCTAAACAGGTCTGGCGCAT 61.027 55.000 10.83 0.00 34.19 4.73
584 616 0.321653 AAGGCTAAACAGGTCTGGCG 60.322 55.000 2.87 0.00 34.19 5.69
623 656 0.391130 CTAGCTAAACAGGCGTGGCA 60.391 55.000 11.67 0.00 34.52 4.92
684 720 6.279513 AGTGTCATGGTTGTTTCTCAAAAA 57.720 33.333 0.00 0.00 37.81 1.94
685 721 5.913137 AGTGTCATGGTTGTTTCTCAAAA 57.087 34.783 0.00 0.00 37.81 2.44
686 722 6.119536 ACTAGTGTCATGGTTGTTTCTCAAA 58.880 36.000 0.00 0.00 37.81 2.69
687 723 5.680619 ACTAGTGTCATGGTTGTTTCTCAA 58.319 37.500 0.00 0.00 0.00 3.02
688 724 5.290493 ACTAGTGTCATGGTTGTTTCTCA 57.710 39.130 0.00 0.00 0.00 3.27
689 725 6.619801 AAACTAGTGTCATGGTTGTTTCTC 57.380 37.500 0.00 0.00 0.00 2.87
690 726 7.012044 GTGTAAACTAGTGTCATGGTTGTTTCT 59.988 37.037 0.00 0.00 0.00 2.52
691 727 7.130269 GTGTAAACTAGTGTCATGGTTGTTTC 58.870 38.462 0.00 0.00 0.00 2.78
692 728 6.038936 GGTGTAAACTAGTGTCATGGTTGTTT 59.961 38.462 0.00 0.00 0.00 2.83
693 729 5.529800 GGTGTAAACTAGTGTCATGGTTGTT 59.470 40.000 0.00 0.00 0.00 2.83
694 730 5.061179 GGTGTAAACTAGTGTCATGGTTGT 58.939 41.667 0.00 0.00 0.00 3.32
695 731 4.454504 GGGTGTAAACTAGTGTCATGGTTG 59.545 45.833 0.00 0.00 0.00 3.77
696 732 4.103469 TGGGTGTAAACTAGTGTCATGGTT 59.897 41.667 0.00 0.00 0.00 3.67
697 733 3.649023 TGGGTGTAAACTAGTGTCATGGT 59.351 43.478 0.00 0.00 0.00 3.55
698 734 4.000988 GTGGGTGTAAACTAGTGTCATGG 58.999 47.826 0.00 0.00 0.00 3.66
699 735 4.894784 AGTGGGTGTAAACTAGTGTCATG 58.105 43.478 0.00 0.00 0.00 3.07
700 736 6.675413 TTAGTGGGTGTAAACTAGTGTCAT 57.325 37.500 0.00 0.00 30.85 3.06
701 737 6.282930 GTTTAGTGGGTGTAAACTAGTGTCA 58.717 40.000 0.00 0.00 37.39 3.58
702 738 5.403466 CGTTTAGTGGGTGTAAACTAGTGTC 59.597 44.000 0.00 0.00 37.95 3.67
703 739 5.068987 TCGTTTAGTGGGTGTAAACTAGTGT 59.931 40.000 0.00 0.00 37.95 3.55
704 740 5.531634 TCGTTTAGTGGGTGTAAACTAGTG 58.468 41.667 0.00 0.00 37.95 2.74
705 741 5.279156 CCTCGTTTAGTGGGTGTAAACTAGT 60.279 44.000 0.00 0.00 37.95 2.57
706 742 5.166398 CCTCGTTTAGTGGGTGTAAACTAG 58.834 45.833 4.68 0.00 37.95 2.57
707 743 4.588528 ACCTCGTTTAGTGGGTGTAAACTA 59.411 41.667 4.68 0.00 37.95 2.24
708 744 3.389002 ACCTCGTTTAGTGGGTGTAAACT 59.611 43.478 4.68 0.00 37.95 2.66
709 745 3.732212 ACCTCGTTTAGTGGGTGTAAAC 58.268 45.455 0.00 0.00 37.80 2.01
741 777 7.442969 TGCGTACCTCTTTTAGATTTTCTCAAA 59.557 33.333 0.00 0.00 0.00 2.69
742 778 6.932400 TGCGTACCTCTTTTAGATTTTCTCAA 59.068 34.615 0.00 0.00 0.00 3.02
743 779 6.367969 GTGCGTACCTCTTTTAGATTTTCTCA 59.632 38.462 0.00 0.00 0.00 3.27
744 780 6.590677 AGTGCGTACCTCTTTTAGATTTTCTC 59.409 38.462 0.00 0.00 0.00 2.87
745 781 6.465084 AGTGCGTACCTCTTTTAGATTTTCT 58.535 36.000 0.00 0.00 0.00 2.52
748 784 7.201617 GCAATAGTGCGTACCTCTTTTAGATTT 60.202 37.037 0.00 0.00 41.93 2.17
749 785 6.258068 GCAATAGTGCGTACCTCTTTTAGATT 59.742 38.462 0.00 0.00 41.93 2.40
750 786 5.753921 GCAATAGTGCGTACCTCTTTTAGAT 59.246 40.000 0.00 0.00 41.93 1.98
751 787 5.107133 GCAATAGTGCGTACCTCTTTTAGA 58.893 41.667 0.00 0.00 41.93 2.10
766 802 3.813443 ACCTGGCAATCTAGCAATAGTG 58.187 45.455 0.00 0.00 35.83 2.74
785 859 0.249699 CCCGTTTTCTTGGCCAAACC 60.250 55.000 20.91 4.65 39.84 3.27
787 861 1.330655 TGCCCGTTTTCTTGGCCAAA 61.331 50.000 20.91 7.94 44.72 3.28
788 862 1.118356 ATGCCCGTTTTCTTGGCCAA 61.118 50.000 19.25 19.25 44.72 4.52
808 882 3.131478 GGTTCGCCCCATGGTTCG 61.131 66.667 11.73 13.40 0.00 3.95
809 883 3.131478 CGGTTCGCCCCATGGTTC 61.131 66.667 11.73 0.33 0.00 3.62
831 1515 1.095807 GGGCCTAGACCGTGCAATTC 61.096 60.000 0.84 0.00 0.00 2.17
862 1546 1.379176 CGTGCCCTCTCTCTCTGGA 60.379 63.158 0.00 0.00 0.00 3.86
871 1590 1.979693 GAGACCACTCGTGCCCTCT 60.980 63.158 8.61 1.69 33.32 3.69
873 1592 1.534235 AAGAGACCACTCGTGCCCT 60.534 57.895 0.00 0.00 46.64 5.19
874 1593 1.079750 GAAGAGACCACTCGTGCCC 60.080 63.158 0.00 0.00 46.64 5.36
875 1594 1.079750 GGAAGAGACCACTCGTGCC 60.080 63.158 0.00 0.00 46.64 5.01
877 1596 0.969894 AAGGGAAGAGACCACTCGTG 59.030 55.000 0.00 0.00 46.64 4.35
878 1597 1.203075 AGAAGGGAAGAGACCACTCGT 60.203 52.381 0.00 0.00 46.64 4.18
879 1598 1.551452 AGAAGGGAAGAGACCACTCG 58.449 55.000 0.00 0.00 46.64 4.18
880 1599 2.235155 GGAAGAAGGGAAGAGACCACTC 59.765 54.545 0.00 0.00 42.90 3.51
882 1601 2.027653 CAGGAAGAAGGGAAGAGACCAC 60.028 54.545 0.00 0.00 0.00 4.16
883 1602 2.260822 CAGGAAGAAGGGAAGAGACCA 58.739 52.381 0.00 0.00 0.00 4.02
924 1651 2.041265 GGAGAGGGCCAAGGGAGA 59.959 66.667 6.18 0.00 0.00 3.71
925 1652 2.041928 AGGAGAGGGCCAAGGGAG 59.958 66.667 6.18 0.00 0.00 4.30
974 1727 1.949257 CGCCGGAAAAAGCTTGTCT 59.051 52.632 5.05 0.00 0.00 3.41
1088 1890 2.693250 TTCAGTCTGACACGGCACCG 62.693 60.000 10.88 7.71 46.03 4.94
1139 1952 6.325596 AGCAAGAAAGGCGAAGATTTTATTC 58.674 36.000 0.00 0.00 36.08 1.75
1143 1956 3.365364 CGAGCAAGAAAGGCGAAGATTTT 60.365 43.478 0.00 0.00 36.08 1.82
1173 2289 3.195698 GGAACACGCCGATCCAGC 61.196 66.667 0.00 0.00 33.30 4.85
1192 2308 1.071471 GACCACACCACCACCTCAG 59.929 63.158 0.00 0.00 0.00 3.35
1195 2311 1.692749 ACAGACCACACCACCACCT 60.693 57.895 0.00 0.00 0.00 4.00
1196 2312 1.525995 CACAGACCACACCACCACC 60.526 63.158 0.00 0.00 0.00 4.61
1197 2313 1.525995 CCACAGACCACACCACCAC 60.526 63.158 0.00 0.00 0.00 4.16
1198 2314 0.691413 TACCACAGACCACACCACCA 60.691 55.000 0.00 0.00 0.00 4.17
1199 2315 0.034896 CTACCACAGACCACACCACC 59.965 60.000 0.00 0.00 0.00 4.61
1200 2316 0.602905 GCTACCACAGACCACACCAC 60.603 60.000 0.00 0.00 0.00 4.16
1201 2317 1.752198 GCTACCACAGACCACACCA 59.248 57.895 0.00 0.00 0.00 4.17
1202 2318 1.374252 CGCTACCACAGACCACACC 60.374 63.158 0.00 0.00 0.00 4.16
1203 2319 2.027625 GCGCTACCACAGACCACAC 61.028 63.158 0.00 0.00 0.00 3.82
1204 2320 0.896479 TAGCGCTACCACAGACCACA 60.896 55.000 14.45 0.00 0.00 4.17
1205 2321 0.179134 CTAGCGCTACCACAGACCAC 60.179 60.000 14.45 0.00 0.00 4.16
1206 2322 0.323087 TCTAGCGCTACCACAGACCA 60.323 55.000 14.45 0.00 0.00 4.02
1207 2323 1.001158 GATCTAGCGCTACCACAGACC 60.001 57.143 14.45 0.00 0.00 3.85
1208 2324 1.950909 AGATCTAGCGCTACCACAGAC 59.049 52.381 14.45 5.91 0.00 3.51
1209 2325 2.222886 GAGATCTAGCGCTACCACAGA 58.777 52.381 14.45 11.47 0.00 3.41
1245 2375 1.384525 GAGAGAGCTCTGCGACCTAA 58.615 55.000 23.91 0.00 40.61 2.69
1317 2501 3.329889 TGACCCGCTGCCCTTCAT 61.330 61.111 0.00 0.00 0.00 2.57
1430 2641 5.200483 TGACCAGAAAGATCAAAGGTTGTT 58.800 37.500 0.00 0.00 30.62 2.83
1431 2654 4.792068 TGACCAGAAAGATCAAAGGTTGT 58.208 39.130 0.00 0.00 30.62 3.32
1453 2676 2.813754 ACGCATGTGACAGCAAAGTTAT 59.186 40.909 14.43 0.00 0.00 1.89
1466 2689 4.668576 ATGAAGAAGTACAACGCATGTG 57.331 40.909 4.30 4.30 43.77 3.21
1554 2804 5.997746 AGACAAAGCAGTAGCATTTCAGTTA 59.002 36.000 0.00 0.00 45.49 2.24
1668 2930 7.499321 TCGACTTCCAAAGCTATTTACAAAA 57.501 32.000 0.00 0.00 0.00 2.44
1710 2973 8.232513 CCATAAAGCATATAAGCATACACACAG 58.767 37.037 2.37 0.00 36.85 3.66
1849 3209 6.311200 GCGCAAGATAAAAGGAAATGACATTT 59.689 34.615 13.24 13.24 43.02 2.32
1850 3210 5.807011 GCGCAAGATAAAAGGAAATGACATT 59.193 36.000 0.30 0.00 43.02 2.71
1851 3211 5.126061 AGCGCAAGATAAAAGGAAATGACAT 59.874 36.000 11.47 0.00 43.02 3.06
1891 3258 3.093814 TCCAGCATGAAAATGTCTGCAT 58.906 40.909 0.00 0.00 39.69 3.96
1895 3262 7.707624 TTATCTTTCCAGCATGAAAATGTCT 57.292 32.000 0.00 0.00 39.69 3.41
1901 3268 7.011389 CGACAGTATTATCTTTCCAGCATGAAA 59.989 37.037 0.00 1.42 39.69 2.69
1946 3319 4.878397 ACAGAGTTAGCCATATGCAGAAAC 59.122 41.667 0.00 0.00 44.83 2.78
2050 3427 7.876582 TCATCTTCCTGATAGTATGCATTTCAG 59.123 37.037 3.54 12.25 33.36 3.02
2053 3430 6.654161 GCTCATCTTCCTGATAGTATGCATTT 59.346 38.462 3.54 0.00 33.36 2.32
2122 3533 4.857679 TGTCATCCATTTCATCCACATCA 58.142 39.130 0.00 0.00 0.00 3.07
2127 3538 5.894964 ACATCATTGTCATCCATTTCATCCA 59.105 36.000 0.00 0.00 0.00 3.41
2144 3555 4.385643 CCTCCACATACCCTCAACATCATT 60.386 45.833 0.00 0.00 0.00 2.57
2163 3574 4.618920 TTGAAGGAACTACAGAACCTCC 57.381 45.455 0.00 0.00 38.49 4.30
2166 3577 5.998363 ACTGAATTGAAGGAACTACAGAACC 59.002 40.000 0.00 0.00 38.49 3.62
2167 3578 7.226720 TGAACTGAATTGAAGGAACTACAGAAC 59.773 37.037 0.00 0.00 38.49 3.01
2183 3594 9.046296 CAACTAAGTGTCTACTTGAACTGAATT 57.954 33.333 3.11 0.00 46.28 2.17
2270 3698 2.743838 CGGGTACGGGCAATAACTTCAT 60.744 50.000 0.00 0.00 36.18 2.57
2331 3778 5.418524 GGAAATGCCAAAATTTAGCCCAATT 59.581 36.000 9.85 2.41 36.34 2.32
2372 3819 6.057533 TCTATCATTGCGGAACAAATCAGAT 58.942 36.000 0.00 0.00 42.86 2.90
2379 3827 5.106317 GGAGTTTTCTATCATTGCGGAACAA 60.106 40.000 0.00 0.00 44.01 2.83
2386 3834 9.899226 GGTAAATATGGAGTTTTCTATCATTGC 57.101 33.333 0.00 0.00 0.00 3.56
2462 3915 9.871238 GAACAGAATATTAGAGAGTACAAACCA 57.129 33.333 0.00 0.00 0.00 3.67
2521 3976 7.312154 TGATACGGTTCCAAAGAATTGAAATG 58.688 34.615 0.00 0.00 38.94 2.32
2559 4018 3.641434 AGCAGTGCTGAATAATCCAGT 57.359 42.857 18.98 0.00 37.57 4.00
2563 4022 8.397906 TGTGTAAATAAGCAGTGCTGAATAATC 58.602 33.333 20.55 7.78 39.62 1.75
2857 4338 8.203485 TGGAATTTTGAACATCTTAGTTTTGCT 58.797 29.630 0.00 0.00 0.00 3.91
2901 4386 2.682856 TGACTGCAACCAAGTCTTGTTC 59.317 45.455 11.61 0.00 34.03 3.18
2913 4398 3.126858 TGAACAGAAACTGTGACTGCAAC 59.873 43.478 5.17 0.00 44.62 4.17
3072 4571 1.466167 CCCAGAAAGCACAGACGAATG 59.534 52.381 0.00 0.00 0.00 2.67
3276 4781 8.548721 AGAACTTAAGAAAATATGATAACCGCG 58.451 33.333 10.09 0.00 0.00 6.46
3413 4920 1.303309 GTGTCTGCAGCTCAGTGTTT 58.697 50.000 9.47 0.00 43.32 2.83
3475 4985 1.737008 GACGGCTCACCCTTCGAAC 60.737 63.158 0.00 0.00 0.00 3.95
3544 5054 2.100603 CGAGCTCGACGTCCTTCC 59.899 66.667 32.06 0.00 43.02 3.46
3632 5142 0.462581 TCAACTCCATGATGGCGCTC 60.463 55.000 6.59 0.00 37.47 5.03
3697 5211 3.007182 CCAAAAGACAGCATTGACCCAAT 59.993 43.478 0.00 0.00 34.04 3.16
3727 5243 2.046313 CGCAACTGCAACATTCAAGAC 58.954 47.619 2.12 0.00 42.21 3.01
3750 5273 3.030291 ACAGAGACATAGAGCCTCCAAG 58.970 50.000 0.00 0.00 0.00 3.61
3762 5285 5.128919 ACTTTCAGCTTTCAACAGAGACAT 58.871 37.500 0.00 0.00 0.00 3.06
3834 5386 4.828387 TGTTTAAACGCCTCCAAAACCTAT 59.172 37.500 13.45 0.00 30.75 2.57
3886 5438 3.259123 ACAGCCAATTCAGATTTTCCCAC 59.741 43.478 0.00 0.00 0.00 4.61
3914 5466 5.643379 ATGACATCCGTTTGTAGCAAAAT 57.357 34.783 0.00 0.00 0.00 1.82
4006 5568 7.099120 ACAAACTCAAAAGCTGTCTCAAAATT 58.901 30.769 0.00 0.00 0.00 1.82
4023 5585 2.762887 TCCATGTGGCAAAACAAACTCA 59.237 40.909 0.00 0.00 32.81 3.41
4024 5586 3.451141 TCCATGTGGCAAAACAAACTC 57.549 42.857 0.00 0.00 32.81 3.01
4098 5660 2.039624 ACCATCCTCCAGCTCCGT 59.960 61.111 0.00 0.00 0.00 4.69
4234 5796 3.274288 GCCCACAACAAATTTTGGTCAA 58.726 40.909 13.42 0.00 34.31 3.18
4297 5859 6.200114 TGTGTATAGGCTTTTCCCTAGTAGT 58.800 40.000 0.00 0.00 40.62 2.73
4298 5860 6.726490 TGTGTATAGGCTTTTCCCTAGTAG 57.274 41.667 0.00 0.00 40.62 2.57
4299 5861 7.499200 TTTGTGTATAGGCTTTTCCCTAGTA 57.501 36.000 0.00 0.00 40.62 1.82
4300 5862 6.382919 TTTGTGTATAGGCTTTTCCCTAGT 57.617 37.500 0.00 0.00 40.62 2.57
4301 5863 7.393515 ACTTTTTGTGTATAGGCTTTTCCCTAG 59.606 37.037 0.00 0.00 40.62 3.02
4302 5864 7.235804 ACTTTTTGTGTATAGGCTTTTCCCTA 58.764 34.615 0.00 0.00 41.48 3.53
4303 5865 6.075315 ACTTTTTGTGTATAGGCTTTTCCCT 58.925 36.000 0.00 0.00 39.05 4.20
4304 5866 6.340962 ACTTTTTGTGTATAGGCTTTTCCC 57.659 37.500 0.00 0.00 34.51 3.97
4305 5867 8.573885 AGTAACTTTTTGTGTATAGGCTTTTCC 58.426 33.333 0.00 0.00 0.00 3.13
4308 5870 9.788889 ACTAGTAACTTTTTGTGTATAGGCTTT 57.211 29.630 0.00 0.00 0.00 3.51
4311 5873 8.815189 GCTACTAGTAACTTTTTGTGTATAGGC 58.185 37.037 3.76 0.00 0.00 3.93
4312 5874 9.017669 CGCTACTAGTAACTTTTTGTGTATAGG 57.982 37.037 3.76 0.00 0.00 2.57
4313 5875 9.778993 TCGCTACTAGTAACTTTTTGTGTATAG 57.221 33.333 3.76 0.00 0.00 1.31
4314 5876 9.778993 CTCGCTACTAGTAACTTTTTGTGTATA 57.221 33.333 3.76 0.00 0.00 1.47
4315 5877 7.758528 CCTCGCTACTAGTAACTTTTTGTGTAT 59.241 37.037 3.76 0.00 0.00 2.29
4316 5878 7.086376 CCTCGCTACTAGTAACTTTTTGTGTA 58.914 38.462 3.76 0.00 0.00 2.90
4317 5879 5.924825 CCTCGCTACTAGTAACTTTTTGTGT 59.075 40.000 3.76 0.00 0.00 3.72
4318 5880 5.347907 CCCTCGCTACTAGTAACTTTTTGTG 59.652 44.000 3.76 0.00 0.00 3.33
4319 5881 5.011431 ACCCTCGCTACTAGTAACTTTTTGT 59.989 40.000 3.76 0.00 0.00 2.83
4320 5882 5.476614 ACCCTCGCTACTAGTAACTTTTTG 58.523 41.667 3.76 0.00 0.00 2.44
4321 5883 5.735285 ACCCTCGCTACTAGTAACTTTTT 57.265 39.130 3.76 0.00 0.00 1.94
4322 5884 5.735285 AACCCTCGCTACTAGTAACTTTT 57.265 39.130 3.76 0.00 0.00 2.27
4323 5885 6.840780 TTAACCCTCGCTACTAGTAACTTT 57.159 37.500 3.76 0.00 0.00 2.66
4324 5886 6.840780 TTTAACCCTCGCTACTAGTAACTT 57.159 37.500 3.76 0.00 0.00 2.66
4325 5887 6.840780 TTTTAACCCTCGCTACTAGTAACT 57.159 37.500 3.76 0.00 0.00 2.24
4326 5888 6.311445 GGTTTTTAACCCTCGCTACTAGTAAC 59.689 42.308 3.76 0.00 46.12 2.50
4327 5889 6.398095 GGTTTTTAACCCTCGCTACTAGTAA 58.602 40.000 3.76 0.00 46.12 2.24
4328 5890 5.965922 GGTTTTTAACCCTCGCTACTAGTA 58.034 41.667 1.89 1.89 46.12 1.82
4329 5891 4.825422 GGTTTTTAACCCTCGCTACTAGT 58.175 43.478 0.00 0.00 46.12 2.57
4342 5904 3.466712 GCAGTAGCGAGGGTTTTTAAC 57.533 47.619 0.00 0.00 0.00 2.01
4363 5925 0.680921 ACCCGCGCTACTGGTAAGTA 60.681 55.000 5.56 0.00 37.88 2.24
4364 5926 1.538687 AACCCGCGCTACTGGTAAGT 61.539 55.000 5.56 0.00 34.24 2.24
4365 5927 0.390735 AAACCCGCGCTACTGGTAAG 60.391 55.000 5.56 0.00 34.24 2.34
4366 5928 0.035176 AAAACCCGCGCTACTGGTAA 59.965 50.000 5.56 0.00 34.24 2.85
4367 5929 0.035176 AAAAACCCGCGCTACTGGTA 59.965 50.000 5.56 0.00 34.24 3.25
4368 5930 0.035176 TAAAAACCCGCGCTACTGGT 59.965 50.000 5.56 0.00 37.50 4.00
4369 5931 1.158434 TTAAAAACCCGCGCTACTGG 58.842 50.000 5.56 0.00 0.00 4.00
4370 5932 2.577450 GTTTAAAAACCCGCGCTACTG 58.423 47.619 5.56 0.00 32.82 2.74
4371 5933 2.975410 GTTTAAAAACCCGCGCTACT 57.025 45.000 5.56 0.00 32.82 2.57
4380 5942 7.600375 ACTTAGTAGTAGCGAGGTTTAAAAACC 59.400 37.037 15.41 15.41 44.80 3.27
4381 5943 8.526218 ACTTAGTAGTAGCGAGGTTTAAAAAC 57.474 34.615 0.00 0.00 33.78 2.43
4382 5944 8.981647 CAACTTAGTAGTAGCGAGGTTTAAAAA 58.018 33.333 0.00 0.00 33.17 1.94
4383 5945 8.359642 TCAACTTAGTAGTAGCGAGGTTTAAAA 58.640 33.333 0.00 0.00 33.17 1.52
4384 5946 7.885297 TCAACTTAGTAGTAGCGAGGTTTAAA 58.115 34.615 0.00 0.00 33.17 1.52
4385 5947 7.452880 TCAACTTAGTAGTAGCGAGGTTTAA 57.547 36.000 0.00 0.00 33.17 1.52
4386 5948 7.636150 ATCAACTTAGTAGTAGCGAGGTTTA 57.364 36.000 0.00 0.00 33.17 2.01
4387 5949 5.972107 TCAACTTAGTAGTAGCGAGGTTT 57.028 39.130 0.00 0.00 33.17 3.27
4388 5950 6.238703 GCTATCAACTTAGTAGTAGCGAGGTT 60.239 42.308 7.47 0.00 33.17 3.50
4389 5951 5.239087 GCTATCAACTTAGTAGTAGCGAGGT 59.761 44.000 7.47 0.00 33.17 3.85
4390 5952 5.238868 TGCTATCAACTTAGTAGTAGCGAGG 59.761 44.000 14.34 0.00 35.80 4.63
4391 5953 6.301687 TGCTATCAACTTAGTAGTAGCGAG 57.698 41.667 14.34 0.00 35.80 5.03
4392 5954 5.277876 GCTGCTATCAACTTAGTAGTAGCGA 60.278 44.000 7.08 3.14 41.75 4.93
4393 5955 4.912766 GCTGCTATCAACTTAGTAGTAGCG 59.087 45.833 7.08 8.22 41.75 4.26
4395 5957 5.918011 GCTGCTGCTATCAACTTAGTAGTAG 59.082 44.000 8.53 9.24 42.92 2.57
4396 5958 5.505819 CGCTGCTGCTATCAACTTAGTAGTA 60.506 44.000 14.03 0.00 35.20 1.82
4397 5959 4.688021 GCTGCTGCTATCAACTTAGTAGT 58.312 43.478 8.53 0.00 35.20 2.73
4398 5960 3.733224 CGCTGCTGCTATCAACTTAGTAG 59.267 47.826 14.03 0.00 35.67 2.57
4399 5961 3.706698 CGCTGCTGCTATCAACTTAGTA 58.293 45.455 14.03 0.00 36.97 1.82
4400 5962 2.544685 CGCTGCTGCTATCAACTTAGT 58.455 47.619 14.03 0.00 36.97 2.24
4401 5963 1.260033 GCGCTGCTGCTATCAACTTAG 59.740 52.381 14.03 0.00 36.97 2.18
4402 5964 1.290203 GCGCTGCTGCTATCAACTTA 58.710 50.000 14.03 0.00 36.97 2.24
4403 5965 0.674581 TGCGCTGCTGCTATCAACTT 60.675 50.000 9.73 0.00 36.97 2.66
4404 5966 1.078918 TGCGCTGCTGCTATCAACT 60.079 52.632 9.73 0.00 36.97 3.16
4405 5967 1.351012 CTGCGCTGCTGCTATCAAC 59.649 57.895 9.73 0.00 36.97 3.18
4406 5968 1.816679 CCTGCGCTGCTGCTATCAA 60.817 57.895 9.73 0.00 36.97 2.57
4407 5969 2.202974 CCTGCGCTGCTGCTATCA 60.203 61.111 9.73 7.75 36.97 2.15
4408 5970 1.372087 AAACCTGCGCTGCTGCTATC 61.372 55.000 9.73 3.53 36.97 2.08
4409 5971 0.962356 AAAACCTGCGCTGCTGCTAT 60.962 50.000 9.73 1.59 36.97 2.97
4410 5972 1.172180 AAAAACCTGCGCTGCTGCTA 61.172 50.000 9.73 1.85 36.97 3.49
4411 5973 1.172180 TAAAAACCTGCGCTGCTGCT 61.172 50.000 9.73 0.00 36.97 4.24
4412 5974 0.318614 TTAAAAACCTGCGCTGCTGC 60.319 50.000 9.73 5.34 0.00 5.25
4413 5975 1.408422 GTTAAAAACCTGCGCTGCTG 58.592 50.000 9.73 0.00 0.00 4.41
4414 5976 3.865700 GTTAAAAACCTGCGCTGCT 57.134 47.368 9.73 0.00 0.00 4.24
4424 5986 6.035435 GCTTAGTAGTAGCGAGGGTTAAAAAC 59.965 42.308 0.00 0.00 0.00 2.43
4425 5987 6.101997 GCTTAGTAGTAGCGAGGGTTAAAAA 58.898 40.000 0.00 0.00 0.00 1.94
4426 5988 5.654497 GCTTAGTAGTAGCGAGGGTTAAAA 58.346 41.667 0.00 0.00 0.00 1.52
4427 5989 5.254339 GCTTAGTAGTAGCGAGGGTTAAA 57.746 43.478 0.00 0.00 0.00 1.52
4428 5990 4.907879 GCTTAGTAGTAGCGAGGGTTAA 57.092 45.455 0.00 0.00 0.00 2.01
4437 5999 3.498018 GGTAGAGACCGCTTAGTAGTAGC 59.502 52.174 0.00 0.00 35.52 3.58
4450 6012 3.468140 GGGGGCACGGTAGAGACC 61.468 72.222 0.00 0.00 43.03 3.85
4464 6026 1.054406 ACTATGACATGTCCCGGGGG 61.054 60.000 23.50 10.79 0.00 5.40
4465 6027 1.618837 CTACTATGACATGTCCCGGGG 59.381 57.143 23.50 6.77 0.00 5.73
4466 6028 2.317040 ACTACTATGACATGTCCCGGG 58.683 52.381 22.85 16.85 0.00 5.73
4467 6029 3.057456 GCTACTACTATGACATGTCCCGG 60.057 52.174 22.85 14.02 0.00 5.73
4468 6030 3.365064 CGCTACTACTATGACATGTCCCG 60.365 52.174 22.85 12.99 0.00 5.14
4469 6031 3.612004 GCGCTACTACTATGACATGTCCC 60.612 52.174 22.85 0.00 0.00 4.46
4470 6032 3.566523 GCGCTACTACTATGACATGTCC 58.433 50.000 22.85 5.91 0.00 4.02
4471 6033 3.227147 CGCGCTACTACTATGACATGTC 58.773 50.000 19.27 19.27 0.00 3.06
4472 6034 2.031069 CCGCGCTACTACTATGACATGT 60.031 50.000 5.56 0.00 0.00 3.21
4473 6035 2.585845 CCGCGCTACTACTATGACATG 58.414 52.381 5.56 0.00 0.00 3.21
4474 6036 1.540267 CCCGCGCTACTACTATGACAT 59.460 52.381 5.56 0.00 0.00 3.06
4475 6037 0.949397 CCCGCGCTACTACTATGACA 59.051 55.000 5.56 0.00 0.00 3.58
4476 6038 0.950116 ACCCGCGCTACTACTATGAC 59.050 55.000 5.56 0.00 0.00 3.06
4477 6039 1.605710 GAACCCGCGCTACTACTATGA 59.394 52.381 5.56 0.00 0.00 2.15
4478 6040 1.335810 TGAACCCGCGCTACTACTATG 59.664 52.381 5.56 0.00 0.00 2.23
4479 6041 1.683943 TGAACCCGCGCTACTACTAT 58.316 50.000 5.56 0.00 0.00 2.12
4480 6042 1.605710 GATGAACCCGCGCTACTACTA 59.394 52.381 5.56 0.00 0.00 1.82
4481 6043 0.384669 GATGAACCCGCGCTACTACT 59.615 55.000 5.56 0.00 0.00 2.57
4482 6044 0.596859 GGATGAACCCGCGCTACTAC 60.597 60.000 5.56 0.00 0.00 2.73
4483 6045 1.038681 TGGATGAACCCGCGCTACTA 61.039 55.000 5.56 0.00 38.00 1.82
4484 6046 1.895020 TTGGATGAACCCGCGCTACT 61.895 55.000 5.56 0.00 38.00 2.57
4485 6047 1.022451 TTTGGATGAACCCGCGCTAC 61.022 55.000 5.56 0.00 38.00 3.58
4486 6048 0.107410 ATTTGGATGAACCCGCGCTA 60.107 50.000 5.56 0.00 38.00 4.26
4487 6049 0.965363 AATTTGGATGAACCCGCGCT 60.965 50.000 5.56 0.00 38.00 5.92
4488 6050 0.108851 AAATTTGGATGAACCCGCGC 60.109 50.000 0.00 0.00 38.00 6.86
4489 6051 3.175929 GTTAAATTTGGATGAACCCGCG 58.824 45.455 0.00 0.00 38.00 6.46
4490 6052 3.175929 CGTTAAATTTGGATGAACCCGC 58.824 45.455 0.00 0.00 38.00 6.13
4491 6053 3.428316 CCCGTTAAATTTGGATGAACCCG 60.428 47.826 0.00 0.00 38.00 5.28
4492 6054 3.118920 CCCCGTTAAATTTGGATGAACCC 60.119 47.826 0.00 0.00 38.00 4.11
4493 6055 3.118920 CCCCCGTTAAATTTGGATGAACC 60.119 47.826 0.00 0.00 39.54 3.62
4494 6056 3.764972 TCCCCCGTTAAATTTGGATGAAC 59.235 43.478 0.00 0.00 0.00 3.18
4495 6057 4.048970 TCCCCCGTTAAATTTGGATGAA 57.951 40.909 0.00 0.00 0.00 2.57
4496 6058 3.741245 TCCCCCGTTAAATTTGGATGA 57.259 42.857 0.00 0.00 0.00 2.92
4497 6059 3.118920 GGTTCCCCCGTTAAATTTGGATG 60.119 47.826 0.00 0.00 0.00 3.51
4498 6060 3.101437 GGTTCCCCCGTTAAATTTGGAT 58.899 45.455 0.00 0.00 0.00 3.41
4499 6061 2.527497 GGTTCCCCCGTTAAATTTGGA 58.473 47.619 0.00 0.00 0.00 3.53
4500 6062 1.551430 GGGTTCCCCCGTTAAATTTGG 59.449 52.381 0.00 0.00 42.41 3.28
4512 6074 1.927487 AATGTTTAACGGGGTTCCCC 58.073 50.000 16.52 16.52 41.57 4.81
4513 6075 3.321396 TGAAAATGTTTAACGGGGTTCCC 59.679 43.478 0.00 0.00 41.09 3.97
4514 6076 4.587584 TGAAAATGTTTAACGGGGTTCC 57.412 40.909 0.00 0.00 0.00 3.62
4515 6077 6.905544 TTTTGAAAATGTTTAACGGGGTTC 57.094 33.333 0.00 0.00 0.00 3.62
4516 6078 6.483974 GGATTTTGAAAATGTTTAACGGGGTT 59.516 34.615 8.03 0.00 0.00 4.11
4517 6079 5.992829 GGATTTTGAAAATGTTTAACGGGGT 59.007 36.000 8.03 0.00 0.00 4.95
4518 6080 6.227522 AGGATTTTGAAAATGTTTAACGGGG 58.772 36.000 8.03 0.00 0.00 5.73
4519 6081 6.926272 TGAGGATTTTGAAAATGTTTAACGGG 59.074 34.615 8.03 0.00 0.00 5.28
4520 6082 7.938563 TGAGGATTTTGAAAATGTTTAACGG 57.061 32.000 8.03 0.00 0.00 4.44
4525 6087 9.241919 AGGTTTTTGAGGATTTTGAAAATGTTT 57.758 25.926 8.03 0.00 0.00 2.83
4526 6088 8.806429 AGGTTTTTGAGGATTTTGAAAATGTT 57.194 26.923 8.03 0.00 0.00 2.71
4527 6089 9.898152 TTAGGTTTTTGAGGATTTTGAAAATGT 57.102 25.926 8.03 0.00 0.00 2.71
4529 6091 9.898152 TGTTAGGTTTTTGAGGATTTTGAAAAT 57.102 25.926 2.27 2.27 0.00 1.82
4530 6092 9.377312 CTGTTAGGTTTTTGAGGATTTTGAAAA 57.623 29.630 0.00 0.00 0.00 2.29
4531 6093 8.754080 TCTGTTAGGTTTTTGAGGATTTTGAAA 58.246 29.630 0.00 0.00 0.00 2.69
4532 6094 8.194769 GTCTGTTAGGTTTTTGAGGATTTTGAA 58.805 33.333 0.00 0.00 0.00 2.69
4533 6095 7.340743 TGTCTGTTAGGTTTTTGAGGATTTTGA 59.659 33.333 0.00 0.00 0.00 2.69
4534 6096 7.488322 TGTCTGTTAGGTTTTTGAGGATTTTG 58.512 34.615 0.00 0.00 0.00 2.44
4535 6097 7.654022 TGTCTGTTAGGTTTTTGAGGATTTT 57.346 32.000 0.00 0.00 0.00 1.82
4536 6098 7.654022 TTGTCTGTTAGGTTTTTGAGGATTT 57.346 32.000 0.00 0.00 0.00 2.17
4537 6099 7.654022 TTTGTCTGTTAGGTTTTTGAGGATT 57.346 32.000 0.00 0.00 0.00 3.01
4538 6100 7.654022 TTTTGTCTGTTAGGTTTTTGAGGAT 57.346 32.000 0.00 0.00 0.00 3.24
4539 6101 7.177744 ACTTTTTGTCTGTTAGGTTTTTGAGGA 59.822 33.333 0.00 0.00 0.00 3.71
4540 6102 7.320399 ACTTTTTGTCTGTTAGGTTTTTGAGG 58.680 34.615 0.00 0.00 0.00 3.86
4541 6103 8.757164 AACTTTTTGTCTGTTAGGTTTTTGAG 57.243 30.769 0.00 0.00 0.00 3.02
4542 6104 9.628746 GTAACTTTTTGTCTGTTAGGTTTTTGA 57.371 29.630 0.00 0.00 0.00 2.69
4543 6105 8.580431 CGTAACTTTTTGTCTGTTAGGTTTTTG 58.420 33.333 0.00 0.00 31.50 2.44
4544 6106 7.756272 CCGTAACTTTTTGTCTGTTAGGTTTTT 59.244 33.333 0.00 0.00 33.12 1.94
4545 6107 7.252708 CCGTAACTTTTTGTCTGTTAGGTTTT 58.747 34.615 0.00 0.00 33.12 2.43
4546 6108 6.183360 CCCGTAACTTTTTGTCTGTTAGGTTT 60.183 38.462 0.00 0.00 33.12 3.27
4547 6109 5.297527 CCCGTAACTTTTTGTCTGTTAGGTT 59.702 40.000 0.00 0.00 33.12 3.50
4548 6110 4.818005 CCCGTAACTTTTTGTCTGTTAGGT 59.182 41.667 0.00 0.00 33.12 3.08
4549 6111 4.214758 CCCCGTAACTTTTTGTCTGTTAGG 59.785 45.833 0.00 0.00 34.10 2.69
4550 6112 4.319984 GCCCCGTAACTTTTTGTCTGTTAG 60.320 45.833 0.00 0.00 0.00 2.34
4551 6113 3.565063 GCCCCGTAACTTTTTGTCTGTTA 59.435 43.478 0.00 0.00 0.00 2.41
4552 6114 2.359848 GCCCCGTAACTTTTTGTCTGTT 59.640 45.455 0.00 0.00 0.00 3.16
4553 6115 1.951602 GCCCCGTAACTTTTTGTCTGT 59.048 47.619 0.00 0.00 0.00 3.41
4554 6116 2.227194 AGCCCCGTAACTTTTTGTCTG 58.773 47.619 0.00 0.00 0.00 3.51
4555 6117 2.651382 AGCCCCGTAACTTTTTGTCT 57.349 45.000 0.00 0.00 0.00 3.41
4556 6118 3.720949 AAAGCCCCGTAACTTTTTGTC 57.279 42.857 0.00 0.00 32.24 3.18
4557 6119 5.360429 TCTTAAAAGCCCCGTAACTTTTTGT 59.640 36.000 10.53 0.00 42.00 2.83
4558 6120 5.834169 TCTTAAAAGCCCCGTAACTTTTTG 58.166 37.500 10.53 6.28 42.00 2.44
4559 6121 6.492429 AGATCTTAAAAGCCCCGTAACTTTTT 59.508 34.615 10.53 0.00 42.00 1.94
4560 6122 6.008331 AGATCTTAAAAGCCCCGTAACTTTT 58.992 36.000 10.23 10.23 45.47 2.27
4561 6123 5.567430 AGATCTTAAAAGCCCCGTAACTTT 58.433 37.500 0.00 0.00 37.71 2.66
4562 6124 5.175388 AGATCTTAAAAGCCCCGTAACTT 57.825 39.130 0.00 0.00 0.00 2.66
4563 6125 4.838904 AGATCTTAAAAGCCCCGTAACT 57.161 40.909 0.00 0.00 0.00 2.24
4564 6126 5.910614 TCTAGATCTTAAAAGCCCCGTAAC 58.089 41.667 0.00 0.00 0.00 2.50
4565 6127 5.659971 ACTCTAGATCTTAAAAGCCCCGTAA 59.340 40.000 0.00 0.00 0.00 3.18
4566 6128 5.068723 CACTCTAGATCTTAAAAGCCCCGTA 59.931 44.000 0.00 0.00 0.00 4.02
4567 6129 4.031611 ACTCTAGATCTTAAAAGCCCCGT 58.968 43.478 0.00 0.00 0.00 5.28
4568 6130 4.372656 CACTCTAGATCTTAAAAGCCCCG 58.627 47.826 0.00 0.00 0.00 5.73
4569 6131 4.409247 TCCACTCTAGATCTTAAAAGCCCC 59.591 45.833 0.00 0.00 0.00 5.80
4570 6132 5.615925 TCCACTCTAGATCTTAAAAGCCC 57.384 43.478 0.00 0.00 0.00 5.19
4571 6133 7.923414 TTTTCCACTCTAGATCTTAAAAGCC 57.077 36.000 0.00 0.00 0.00 4.35
4602 6164 7.736447 TTTGACCACACAGTTTGAAATTTTT 57.264 28.000 0.00 0.00 0.00 1.94
4603 6165 7.920160 ATTTGACCACACAGTTTGAAATTTT 57.080 28.000 0.00 0.00 0.00 1.82
4604 6166 7.390162 ACAATTTGACCACACAGTTTGAAATTT 59.610 29.630 2.79 0.00 0.00 1.82
4605 6167 6.878389 ACAATTTGACCACACAGTTTGAAATT 59.122 30.769 2.79 0.00 0.00 1.82
4606 6168 6.313411 CACAATTTGACCACACAGTTTGAAAT 59.687 34.615 2.79 0.00 0.00 2.17
4607 6169 5.636965 CACAATTTGACCACACAGTTTGAAA 59.363 36.000 2.79 0.00 0.00 2.69
4608 6170 5.167121 CACAATTTGACCACACAGTTTGAA 58.833 37.500 2.79 0.00 0.00 2.69
4609 6171 4.381398 CCACAATTTGACCACACAGTTTGA 60.381 41.667 2.79 0.00 0.00 2.69
4610 6172 3.864583 CCACAATTTGACCACACAGTTTG 59.135 43.478 2.79 0.00 0.00 2.93
4611 6173 3.513515 ACCACAATTTGACCACACAGTTT 59.486 39.130 2.79 0.00 0.00 2.66
4612 6174 3.096092 ACCACAATTTGACCACACAGTT 58.904 40.909 2.79 0.00 0.00 3.16
4613 6175 2.687935 GACCACAATTTGACCACACAGT 59.312 45.455 2.79 0.00 0.00 3.55
4614 6176 2.687425 TGACCACAATTTGACCACACAG 59.313 45.455 2.79 0.00 0.00 3.66
4615 6177 2.728007 TGACCACAATTTGACCACACA 58.272 42.857 2.79 0.00 0.00 3.72
4616 6178 3.791973 TTGACCACAATTTGACCACAC 57.208 42.857 2.79 0.00 0.00 3.82
4617 6179 3.511540 TGTTTGACCACAATTTGACCACA 59.488 39.130 2.79 0.00 35.85 4.17
4618 6180 4.116747 TGTTTGACCACAATTTGACCAC 57.883 40.909 2.79 0.00 35.85 4.16
4619 6181 4.808414 TTGTTTGACCACAATTTGACCA 57.192 36.364 2.79 0.00 35.85 4.02
4620 6182 5.355596 TCATTGTTTGACCACAATTTGACC 58.644 37.500 2.79 0.00 43.54 4.02
4621 6183 6.700960 TGATCATTGTTTGACCACAATTTGAC 59.299 34.615 2.79 0.00 43.54 3.18
4622 6184 6.814043 TGATCATTGTTTGACCACAATTTGA 58.186 32.000 2.79 0.00 43.54 2.69
4623 6185 7.479897 TTGATCATTGTTTGACCACAATTTG 57.520 32.000 0.00 0.00 43.54 2.32
4624 6186 7.769970 AGTTTGATCATTGTTTGACCACAATTT 59.230 29.630 0.00 0.00 43.54 1.82
4625 6187 7.274447 AGTTTGATCATTGTTTGACCACAATT 58.726 30.769 0.00 0.00 43.54 2.32
4626 6188 6.819284 AGTTTGATCATTGTTTGACCACAAT 58.181 32.000 0.00 0.00 46.34 2.71
4627 6189 6.219417 AGTTTGATCATTGTTTGACCACAA 57.781 33.333 0.00 0.00 40.92 3.33
4628 6190 5.850557 AGTTTGATCATTGTTTGACCACA 57.149 34.783 0.00 0.00 37.11 4.17
4629 6191 8.816640 AATTAGTTTGATCATTGTTTGACCAC 57.183 30.769 0.00 0.00 37.11 4.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.