Multiple sequence alignment - TraesCS3B01G515500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G515500 chr3B 100.000 3272 0 0 1 3272 757806627 757809898 0.000000e+00 6043.0
1 TraesCS3B01G515500 chr3B 83.906 1280 155 29 994 2258 685039270 685038027 0.000000e+00 1175.0
2 TraesCS3B01G515500 chr3B 81.038 1329 211 30 990 2302 757734139 757735442 0.000000e+00 1020.0
3 TraesCS3B01G515500 chr3B 79.504 1210 209 29 1080 2274 757773361 757772176 0.000000e+00 824.0
4 TraesCS3B01G515500 chr3B 76.599 1235 241 32 993 2224 757472864 757474053 1.280000e-178 636.0
5 TraesCS3B01G515500 chr3D 91.602 2179 102 43 709 2833 570558901 570561052 0.000000e+00 2935.0
6 TraesCS3B01G515500 chr3D 83.632 1283 153 31 994 2258 520191927 520190684 0.000000e+00 1153.0
7 TraesCS3B01G515500 chr3D 79.099 1177 210 26 1080 2244 570496318 570495166 0.000000e+00 778.0
8 TraesCS3B01G515500 chr3D 77.868 1238 223 33 993 2224 570281033 570282225 0.000000e+00 721.0
9 TraesCS3B01G515500 chr3D 77.589 1236 222 33 997 2224 570328429 570329617 0.000000e+00 697.0
10 TraesCS3B01G515500 chr3D 83.747 363 58 1 1 362 72243448 72243086 3.130000e-90 342.0
11 TraesCS3B01G515500 chr3D 90.400 250 23 1 3024 3272 570561054 570561303 8.750000e-86 327.0
12 TraesCS3B01G515500 chr3D 97.368 76 2 0 624 699 570558782 570558857 2.650000e-26 130.0
13 TraesCS3B01G515500 chr3D 82.692 104 12 3 602 699 520192356 520192253 1.620000e-13 87.9
14 TraesCS3B01G515500 chr3D 90.625 64 5 1 413 475 570558660 570558723 2.090000e-12 84.2
15 TraesCS3B01G515500 chr3A 91.586 2175 104 33 485 2616 703394619 703396757 0.000000e+00 2929.0
16 TraesCS3B01G515500 chr3A 83.610 1263 155 25 1010 2258 655637066 655635842 0.000000e+00 1138.0
17 TraesCS3B01G515500 chr3A 80.448 1340 215 35 990 2310 703270270 703271581 0.000000e+00 979.0
18 TraesCS3B01G515500 chr3A 77.221 1238 230 34 993 2224 703170780 703171971 0.000000e+00 676.0
19 TraesCS3B01G515500 chr3A 88.000 50 4 2 1609 1657 688597184 688597232 1.270000e-04 58.4
20 TraesCS3B01G515500 chr7D 82.353 391 62 5 1 390 96503625 96503241 1.880000e-87 333.0
21 TraesCS3B01G515500 chr1B 82.353 391 60 7 1 390 564738980 564739362 6.770000e-87 331.0
22 TraesCS3B01G515500 chr1B 82.834 367 56 6 1 363 302005547 302005184 4.070000e-84 322.0
23 TraesCS3B01G515500 chr4A 82.493 377 61 3 1 373 175416370 175415995 3.150000e-85 326.0
24 TraesCS3B01G515500 chr1A 80.907 419 75 3 1 416 471962230 471961814 3.150000e-85 326.0
25 TraesCS3B01G515500 chr1A 79.384 422 75 9 1 416 471889619 471889204 1.490000e-73 287.0
26 TraesCS3B01G515500 chr2D 82.447 376 58 5 1 375 83811664 83812032 4.070000e-84 322.0
27 TraesCS3B01G515500 chr5D 82.466 365 60 4 1 363 114458448 114458810 1.890000e-82 316.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G515500 chr3B 757806627 757809898 3271 False 6043.00 6043 100.00000 1 3272 1 chr3B.!!$F3 3271
1 TraesCS3B01G515500 chr3B 685038027 685039270 1243 True 1175.00 1175 83.90600 994 2258 1 chr3B.!!$R1 1264
2 TraesCS3B01G515500 chr3B 757734139 757735442 1303 False 1020.00 1020 81.03800 990 2302 1 chr3B.!!$F2 1312
3 TraesCS3B01G515500 chr3B 757772176 757773361 1185 True 824.00 824 79.50400 1080 2274 1 chr3B.!!$R2 1194
4 TraesCS3B01G515500 chr3B 757472864 757474053 1189 False 636.00 636 76.59900 993 2224 1 chr3B.!!$F1 1231
5 TraesCS3B01G515500 chr3D 570558660 570561303 2643 False 869.05 2935 92.49875 413 3272 4 chr3D.!!$F3 2859
6 TraesCS3B01G515500 chr3D 570495166 570496318 1152 True 778.00 778 79.09900 1080 2244 1 chr3D.!!$R2 1164
7 TraesCS3B01G515500 chr3D 570281033 570282225 1192 False 721.00 721 77.86800 993 2224 1 chr3D.!!$F1 1231
8 TraesCS3B01G515500 chr3D 570328429 570329617 1188 False 697.00 697 77.58900 997 2224 1 chr3D.!!$F2 1227
9 TraesCS3B01G515500 chr3D 520190684 520192356 1672 True 620.45 1153 83.16200 602 2258 2 chr3D.!!$R3 1656
10 TraesCS3B01G515500 chr3A 703394619 703396757 2138 False 2929.00 2929 91.58600 485 2616 1 chr3A.!!$F4 2131
11 TraesCS3B01G515500 chr3A 655635842 655637066 1224 True 1138.00 1138 83.61000 1010 2258 1 chr3A.!!$R1 1248
12 TraesCS3B01G515500 chr3A 703270270 703271581 1311 False 979.00 979 80.44800 990 2310 1 chr3A.!!$F3 1320
13 TraesCS3B01G515500 chr3A 703170780 703171971 1191 False 676.00 676 77.22100 993 2224 1 chr3A.!!$F2 1231

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
392 393 0.034896 ACGGTTGCGAGAGGTTTGAT 59.965 50.0 0.0 0.0 0.0 2.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2364 2517 0.304705 GTGACAAATATCGCAGGCCG 59.695 55.0 0.0 0.0 38.61 6.13 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.202650 GCTTCAATGCGGCGCAAT 60.203 55.556 39.46 29.29 43.62 3.56
18 19 2.510594 GCTTCAATGCGGCGCAATG 61.511 57.895 36.74 36.74 43.62 2.82
19 20 1.874915 CTTCAATGCGGCGCAATGG 60.875 57.895 39.49 29.79 43.62 3.16
20 21 3.986030 TTCAATGCGGCGCAATGGC 62.986 57.895 39.49 11.31 43.62 4.40
28 29 4.481112 GCGCAATGGCCGGACTTG 62.481 66.667 9.82 12.10 36.38 3.16
29 30 3.814268 CGCAATGGCCGGACTTGG 61.814 66.667 9.82 0.00 36.38 3.61
30 31 2.676471 GCAATGGCCGGACTTGGT 60.676 61.111 9.82 0.00 0.00 3.67
31 32 2.275380 GCAATGGCCGGACTTGGTT 61.275 57.895 9.82 0.00 0.00 3.67
32 33 1.883021 CAATGGCCGGACTTGGTTC 59.117 57.895 9.82 0.00 0.00 3.62
33 34 1.304134 AATGGCCGGACTTGGTTCC 60.304 57.895 9.82 0.00 0.00 3.62
34 35 1.789576 AATGGCCGGACTTGGTTCCT 61.790 55.000 9.82 0.00 32.88 3.36
35 36 2.046217 GGCCGGACTTGGTTCCTC 60.046 66.667 5.05 0.00 32.88 3.71
36 37 2.747686 GCCGGACTTGGTTCCTCA 59.252 61.111 5.05 0.00 32.88 3.86
37 38 1.376037 GCCGGACTTGGTTCCTCAG 60.376 63.158 5.05 0.00 32.88 3.35
38 39 1.296715 CCGGACTTGGTTCCTCAGG 59.703 63.158 0.00 0.00 32.88 3.86
39 40 1.192146 CCGGACTTGGTTCCTCAGGA 61.192 60.000 0.00 0.00 32.88 3.86
40 41 0.685097 CGGACTTGGTTCCTCAGGAA 59.315 55.000 0.34 0.34 39.66 3.36
47 48 3.885814 TTCCTCAGGAACCTGCGT 58.114 55.556 15.20 0.00 43.31 5.24
48 49 1.671742 TTCCTCAGGAACCTGCGTC 59.328 57.895 15.20 0.00 43.31 5.19
49 50 1.827399 TTCCTCAGGAACCTGCGTCC 61.827 60.000 15.20 0.00 43.31 4.79
50 51 2.125912 CTCAGGAACCTGCGTCCG 60.126 66.667 15.20 0.00 43.31 4.79
51 52 4.373116 TCAGGAACCTGCGTCCGC 62.373 66.667 15.20 4.42 43.31 5.54
61 62 2.099062 GCGTCCGCATTGAAGCAG 59.901 61.111 6.82 0.00 39.21 4.24
62 63 2.680913 GCGTCCGCATTGAAGCAGT 61.681 57.895 6.82 0.00 39.21 4.40
63 64 1.868997 CGTCCGCATTGAAGCAGTT 59.131 52.632 0.00 0.00 0.00 3.16
64 65 0.238289 CGTCCGCATTGAAGCAGTTT 59.762 50.000 0.00 0.00 0.00 2.66
65 66 1.725931 CGTCCGCATTGAAGCAGTTTC 60.726 52.381 0.00 0.00 36.29 2.78
66 67 1.537202 GTCCGCATTGAAGCAGTTTCT 59.463 47.619 0.00 0.00 36.71 2.52
67 68 2.742053 GTCCGCATTGAAGCAGTTTCTA 59.258 45.455 0.00 0.00 36.71 2.10
68 69 2.742053 TCCGCATTGAAGCAGTTTCTAC 59.258 45.455 0.00 0.00 36.71 2.59
69 70 2.159517 CCGCATTGAAGCAGTTTCTACC 60.160 50.000 0.00 0.00 36.71 3.18
70 71 2.483877 CGCATTGAAGCAGTTTCTACCA 59.516 45.455 0.00 0.00 36.71 3.25
71 72 3.058293 CGCATTGAAGCAGTTTCTACCAA 60.058 43.478 0.00 0.00 36.71 3.67
72 73 4.479619 GCATTGAAGCAGTTTCTACCAAG 58.520 43.478 0.00 0.00 36.71 3.61
73 74 4.216257 GCATTGAAGCAGTTTCTACCAAGA 59.784 41.667 0.00 0.00 36.71 3.02
74 75 5.618640 GCATTGAAGCAGTTTCTACCAAGAG 60.619 44.000 0.00 0.00 36.71 2.85
75 76 4.008074 TGAAGCAGTTTCTACCAAGAGG 57.992 45.455 0.00 0.00 37.55 3.69
76 77 3.391296 TGAAGCAGTTTCTACCAAGAGGT 59.609 43.478 0.00 0.00 41.61 3.85
77 78 4.503296 TGAAGCAGTTTCTACCAAGAGGTC 60.503 45.833 0.00 0.00 39.23 3.85
78 79 7.743500 TGAAGCAGTTTCTACCAAGAGGTCG 62.743 48.000 0.00 0.00 39.23 4.79
85 86 4.052229 CCAAGAGGTCGCGTCGGT 62.052 66.667 5.77 0.00 0.00 4.69
86 87 2.504244 CAAGAGGTCGCGTCGGTC 60.504 66.667 5.77 0.73 0.00 4.79
87 88 2.981909 AAGAGGTCGCGTCGGTCA 60.982 61.111 5.77 0.00 0.00 4.02
88 89 2.979197 AAGAGGTCGCGTCGGTCAG 61.979 63.158 5.77 0.00 0.00 3.51
110 111 2.446802 GCCCTCCCTTCCTCCGAT 60.447 66.667 0.00 0.00 0.00 4.18
111 112 2.512355 GCCCTCCCTTCCTCCGATC 61.512 68.421 0.00 0.00 0.00 3.69
112 113 1.075226 CCCTCCCTTCCTCCGATCA 60.075 63.158 0.00 0.00 0.00 2.92
113 114 1.403687 CCCTCCCTTCCTCCGATCAC 61.404 65.000 0.00 0.00 0.00 3.06
114 115 0.687757 CCTCCCTTCCTCCGATCACA 60.688 60.000 0.00 0.00 0.00 3.58
115 116 1.418334 CTCCCTTCCTCCGATCACAT 58.582 55.000 0.00 0.00 0.00 3.21
116 117 1.765314 CTCCCTTCCTCCGATCACATT 59.235 52.381 0.00 0.00 0.00 2.71
117 118 1.486310 TCCCTTCCTCCGATCACATTG 59.514 52.381 0.00 0.00 0.00 2.82
118 119 1.303309 CCTTCCTCCGATCACATTGC 58.697 55.000 0.00 0.00 0.00 3.56
119 120 1.407299 CCTTCCTCCGATCACATTGCA 60.407 52.381 0.00 0.00 0.00 4.08
120 121 1.667724 CTTCCTCCGATCACATTGCAC 59.332 52.381 0.00 0.00 0.00 4.57
121 122 0.107703 TCCTCCGATCACATTGCACC 60.108 55.000 0.00 0.00 0.00 5.01
122 123 0.392863 CCTCCGATCACATTGCACCA 60.393 55.000 0.00 0.00 0.00 4.17
123 124 1.671979 CTCCGATCACATTGCACCAT 58.328 50.000 0.00 0.00 0.00 3.55
124 125 1.600957 CTCCGATCACATTGCACCATC 59.399 52.381 0.00 0.00 0.00 3.51
125 126 1.065564 TCCGATCACATTGCACCATCA 60.066 47.619 0.00 0.00 0.00 3.07
126 127 1.744522 CCGATCACATTGCACCATCAA 59.255 47.619 0.00 0.00 0.00 2.57
127 128 2.359848 CCGATCACATTGCACCATCAAT 59.640 45.455 0.00 0.00 37.16 2.57
132 133 1.934589 CATTGCACCATCAATGCCAG 58.065 50.000 3.91 0.00 44.38 4.85
133 134 0.177141 ATTGCACCATCAATGCCAGC 59.823 50.000 0.00 0.00 42.69 4.85
134 135 1.890625 TTGCACCATCAATGCCAGCC 61.891 55.000 0.00 0.00 42.69 4.85
135 136 2.056223 GCACCATCAATGCCAGCCT 61.056 57.895 0.00 0.00 37.08 4.58
136 137 1.610554 GCACCATCAATGCCAGCCTT 61.611 55.000 0.00 0.00 37.08 4.35
137 138 0.174845 CACCATCAATGCCAGCCTTG 59.825 55.000 1.67 1.67 0.00 3.61
139 140 0.974010 CCATCAATGCCAGCCTTGGT 60.974 55.000 7.64 0.00 46.80 3.67
140 141 1.685803 CCATCAATGCCAGCCTTGGTA 60.686 52.381 7.64 0.00 46.80 3.25
143 144 4.265206 ATGCCAGCCTTGGTATGC 57.735 55.556 0.00 0.00 46.54 3.14
144 145 1.616921 ATGCCAGCCTTGGTATGCT 59.383 52.632 0.00 0.00 46.54 3.79
145 146 0.466922 ATGCCAGCCTTGGTATGCTC 60.467 55.000 0.00 0.00 46.54 4.26
146 147 1.225704 GCCAGCCTTGGTATGCTCT 59.774 57.895 0.00 0.00 46.80 4.09
147 148 1.099879 GCCAGCCTTGGTATGCTCTG 61.100 60.000 0.00 0.00 46.80 3.35
148 149 0.465097 CCAGCCTTGGTATGCTCTGG 60.465 60.000 0.00 0.00 39.79 3.86
149 150 0.465097 CAGCCTTGGTATGCTCTGGG 60.465 60.000 0.00 0.00 35.12 4.45
150 151 1.825622 GCCTTGGTATGCTCTGGGC 60.826 63.158 0.00 0.00 42.22 5.36
151 152 1.152881 CCTTGGTATGCTCTGGGCC 60.153 63.158 0.00 0.00 40.92 5.80
152 153 1.524621 CTTGGTATGCTCTGGGCCG 60.525 63.158 0.00 0.00 40.92 6.13
153 154 2.947938 CTTGGTATGCTCTGGGCCGG 62.948 65.000 5.83 5.83 40.92 6.13
154 155 3.480133 GGTATGCTCTGGGCCGGT 61.480 66.667 13.14 0.00 40.92 5.28
155 156 2.138179 GGTATGCTCTGGGCCGGTA 61.138 63.158 13.14 0.47 40.92 4.02
156 157 1.481056 GGTATGCTCTGGGCCGGTAT 61.481 60.000 13.14 8.33 40.92 2.73
157 158 0.320771 GTATGCTCTGGGCCGGTATG 60.321 60.000 13.14 5.38 40.92 2.39
158 159 0.471022 TATGCTCTGGGCCGGTATGA 60.471 55.000 13.14 0.00 40.92 2.15
159 160 1.344953 ATGCTCTGGGCCGGTATGAA 61.345 55.000 13.14 0.00 40.92 2.57
160 161 1.344953 TGCTCTGGGCCGGTATGAAT 61.345 55.000 13.14 0.00 40.92 2.57
161 162 0.886490 GCTCTGGGCCGGTATGAATG 60.886 60.000 13.14 0.00 34.27 2.67
162 163 0.886490 CTCTGGGCCGGTATGAATGC 60.886 60.000 13.14 0.00 0.00 3.56
163 164 2.203139 TGGGCCGGTATGAATGCG 60.203 61.111 1.90 0.00 0.00 4.73
164 165 2.978010 GGGCCGGTATGAATGCGG 60.978 66.667 1.90 0.00 0.00 5.69
165 166 3.660111 GGCCGGTATGAATGCGGC 61.660 66.667 1.90 0.00 44.13 6.53
166 167 4.012895 GCCGGTATGAATGCGGCG 62.013 66.667 0.51 0.51 35.99 6.46
167 168 4.012895 CCGGTATGAATGCGGCGC 62.013 66.667 27.44 27.44 0.00 6.53
168 169 4.354212 CGGTATGAATGCGGCGCG 62.354 66.667 28.09 0.00 0.00 6.86
169 170 4.012895 GGTATGAATGCGGCGCGG 62.013 66.667 28.09 11.08 0.00 6.46
170 171 3.269347 GTATGAATGCGGCGCGGT 61.269 61.111 28.09 17.65 0.00 5.68
171 172 1.952133 GTATGAATGCGGCGCGGTA 60.952 57.895 28.09 12.81 0.00 4.02
172 173 1.227292 TATGAATGCGGCGCGGTAA 60.227 52.632 28.09 13.50 0.00 2.85
173 174 1.218875 TATGAATGCGGCGCGGTAAG 61.219 55.000 28.09 0.00 0.00 2.34
174 175 4.591317 GAATGCGGCGCGGTAAGC 62.591 66.667 28.09 9.22 43.95 3.09
183 184 4.143363 GCGGTAAGCGGCGTGTTC 62.143 66.667 9.37 0.00 35.41 3.18
184 185 2.735478 CGGTAAGCGGCGTGTTCA 60.735 61.111 9.37 0.00 0.00 3.18
185 186 2.098233 CGGTAAGCGGCGTGTTCAT 61.098 57.895 9.37 0.00 0.00 2.57
186 187 1.713830 GGTAAGCGGCGTGTTCATC 59.286 57.895 9.37 0.00 0.00 2.92
187 188 1.343821 GTAAGCGGCGTGTTCATCG 59.656 57.895 9.37 0.00 0.00 3.84
188 189 1.807981 TAAGCGGCGTGTTCATCGG 60.808 57.895 9.37 0.00 0.00 4.18
189 190 2.215465 TAAGCGGCGTGTTCATCGGA 62.215 55.000 9.37 0.00 0.00 4.55
190 191 3.115892 GCGGCGTGTTCATCGGAA 61.116 61.111 9.37 0.00 0.00 4.30
191 192 3.081133 CGGCGTGTTCATCGGAAG 58.919 61.111 0.00 0.00 32.62 3.46
192 193 2.452813 CGGCGTGTTCATCGGAAGG 61.453 63.158 0.00 0.00 32.62 3.46
193 194 1.079405 GGCGTGTTCATCGGAAGGA 60.079 57.895 0.00 0.00 32.62 3.36
194 195 0.672401 GGCGTGTTCATCGGAAGGAA 60.672 55.000 0.00 0.00 32.62 3.36
195 196 1.153353 GCGTGTTCATCGGAAGGAAA 58.847 50.000 0.00 0.00 32.62 3.13
196 197 1.128692 GCGTGTTCATCGGAAGGAAAG 59.871 52.381 0.00 0.00 32.62 2.62
197 198 1.128692 CGTGTTCATCGGAAGGAAAGC 59.871 52.381 0.00 0.00 32.62 3.51
198 199 1.128692 GTGTTCATCGGAAGGAAAGCG 59.871 52.381 0.00 0.00 32.62 4.68
199 200 0.097150 GTTCATCGGAAGGAAAGCGC 59.903 55.000 0.00 0.00 32.62 5.92
200 201 1.358725 TTCATCGGAAGGAAAGCGCG 61.359 55.000 0.00 0.00 0.00 6.86
201 202 2.511600 ATCGGAAGGAAAGCGCGG 60.512 61.111 8.83 0.00 0.00 6.46
202 203 4.752879 TCGGAAGGAAAGCGCGGG 62.753 66.667 8.83 0.00 0.00 6.13
203 204 4.752879 CGGAAGGAAAGCGCGGGA 62.753 66.667 8.83 0.00 0.00 5.14
204 205 2.820037 GGAAGGAAAGCGCGGGAG 60.820 66.667 8.83 0.00 0.00 4.30
205 206 2.820037 GAAGGAAAGCGCGGGAGG 60.820 66.667 8.83 0.00 0.00 4.30
206 207 4.410400 AAGGAAAGCGCGGGAGGG 62.410 66.667 8.83 0.00 46.83 4.30
222 223 4.960866 GGGCGGGTGACGGGTTTT 62.961 66.667 0.00 0.00 44.51 2.43
223 224 2.908428 GGCGGGTGACGGGTTTTT 60.908 61.111 0.00 0.00 44.51 1.94
224 225 2.333581 GCGGGTGACGGGTTTTTG 59.666 61.111 0.00 0.00 44.51 2.44
225 226 2.188161 GCGGGTGACGGGTTTTTGA 61.188 57.895 0.00 0.00 44.51 2.69
226 227 1.520600 GCGGGTGACGGGTTTTTGAT 61.521 55.000 0.00 0.00 44.51 2.57
227 228 0.239879 CGGGTGACGGGTTTTTGATG 59.760 55.000 0.00 0.00 39.42 3.07
228 229 0.601057 GGGTGACGGGTTTTTGATGG 59.399 55.000 0.00 0.00 0.00 3.51
229 230 0.601057 GGTGACGGGTTTTTGATGGG 59.399 55.000 0.00 0.00 0.00 4.00
230 231 1.611519 GTGACGGGTTTTTGATGGGA 58.388 50.000 0.00 0.00 0.00 4.37
231 232 1.268625 GTGACGGGTTTTTGATGGGAC 59.731 52.381 0.00 0.00 0.00 4.46
243 244 4.631740 TGGGACAGGGCGGTCAGA 62.632 66.667 9.66 0.00 39.59 3.27
244 245 3.319198 GGGACAGGGCGGTCAGAA 61.319 66.667 9.66 0.00 39.59 3.02
245 246 2.266055 GGACAGGGCGGTCAGAAG 59.734 66.667 9.66 0.00 39.59 2.85
246 247 2.435059 GACAGGGCGGTCAGAAGC 60.435 66.667 3.40 0.00 37.73 3.86
281 282 3.069778 GGACTCCCGCAAACCTCT 58.930 61.111 0.00 0.00 0.00 3.69
282 283 1.079057 GGACTCCCGCAAACCTCTC 60.079 63.158 0.00 0.00 0.00 3.20
283 284 1.545706 GGACTCCCGCAAACCTCTCT 61.546 60.000 0.00 0.00 0.00 3.10
284 285 0.108567 GACTCCCGCAAACCTCTCTC 60.109 60.000 0.00 0.00 0.00 3.20
285 286 0.832135 ACTCCCGCAAACCTCTCTCA 60.832 55.000 0.00 0.00 0.00 3.27
286 287 0.539051 CTCCCGCAAACCTCTCTCAT 59.461 55.000 0.00 0.00 0.00 2.90
287 288 0.250234 TCCCGCAAACCTCTCTCATG 59.750 55.000 0.00 0.00 0.00 3.07
288 289 0.036010 CCCGCAAACCTCTCTCATGT 60.036 55.000 0.00 0.00 0.00 3.21
289 290 1.611673 CCCGCAAACCTCTCTCATGTT 60.612 52.381 0.00 0.00 0.00 2.71
290 291 2.154462 CCGCAAACCTCTCTCATGTTT 58.846 47.619 0.00 0.00 32.70 2.83
292 293 2.549754 CGCAAACCTCTCTCATGTTTGT 59.450 45.455 13.78 0.00 46.51 2.83
293 294 3.893720 GCAAACCTCTCTCATGTTTGTG 58.106 45.455 13.78 0.00 46.51 3.33
294 295 3.316308 GCAAACCTCTCTCATGTTTGTGT 59.684 43.478 13.78 0.00 46.51 3.72
295 296 4.555511 GCAAACCTCTCTCATGTTTGTGTC 60.556 45.833 13.78 0.00 46.51 3.67
296 297 3.409026 ACCTCTCTCATGTTTGTGTCC 57.591 47.619 0.00 0.00 0.00 4.02
297 298 2.705658 ACCTCTCTCATGTTTGTGTCCA 59.294 45.455 0.00 0.00 0.00 4.02
298 299 3.244353 ACCTCTCTCATGTTTGTGTCCAG 60.244 47.826 0.00 0.00 0.00 3.86
299 300 3.244353 CCTCTCTCATGTTTGTGTCCAGT 60.244 47.826 0.00 0.00 0.00 4.00
300 301 4.384056 CTCTCTCATGTTTGTGTCCAGTT 58.616 43.478 0.00 0.00 0.00 3.16
301 302 4.780815 TCTCTCATGTTTGTGTCCAGTTT 58.219 39.130 0.00 0.00 0.00 2.66
302 303 4.576053 TCTCTCATGTTTGTGTCCAGTTTG 59.424 41.667 0.00 0.00 0.00 2.93
303 304 3.066621 TCTCATGTTTGTGTCCAGTTTGC 59.933 43.478 0.00 0.00 0.00 3.68
304 305 2.118683 CATGTTTGTGTCCAGTTTGCG 58.881 47.619 0.00 0.00 0.00 4.85
305 306 0.453793 TGTTTGTGTCCAGTTTGCGG 59.546 50.000 0.00 0.00 0.00 5.69
306 307 0.248866 GTTTGTGTCCAGTTTGCGGG 60.249 55.000 0.00 0.00 0.00 6.13
307 308 0.394488 TTTGTGTCCAGTTTGCGGGA 60.394 50.000 0.00 0.00 36.63 5.14
308 309 0.817634 TTGTGTCCAGTTTGCGGGAG 60.818 55.000 0.00 0.00 39.59 4.30
309 310 1.070786 GTGTCCAGTTTGCGGGAGA 59.929 57.895 0.00 0.00 39.59 3.71
310 311 0.534203 GTGTCCAGTTTGCGGGAGAA 60.534 55.000 0.00 0.00 39.59 2.87
311 312 0.181587 TGTCCAGTTTGCGGGAGAAA 59.818 50.000 0.00 0.00 39.59 2.52
312 313 1.202879 TGTCCAGTTTGCGGGAGAAAT 60.203 47.619 0.00 0.00 39.59 2.17
313 314 1.468914 GTCCAGTTTGCGGGAGAAATC 59.531 52.381 0.00 0.00 39.59 2.17
314 315 0.447801 CCAGTTTGCGGGAGAAATCG 59.552 55.000 0.00 0.00 31.21 3.34
319 320 3.262686 GCGGGAGAAATCGCGTCC 61.263 66.667 5.77 4.85 45.79 4.79
320 321 2.954868 CGGGAGAAATCGCGTCCG 60.955 66.667 5.77 5.84 40.45 4.79
321 322 2.585247 GGGAGAAATCGCGTCCGG 60.585 66.667 5.77 0.00 34.56 5.14
322 323 2.493030 GGAGAAATCGCGTCCGGA 59.507 61.111 5.77 0.00 34.56 5.14
323 324 1.877165 GGAGAAATCGCGTCCGGAC 60.877 63.158 25.28 25.28 34.56 4.79
324 325 1.877165 GAGAAATCGCGTCCGGACC 60.877 63.158 28.52 19.32 34.56 4.46
325 326 2.183555 GAAATCGCGTCCGGACCT 59.816 61.111 28.52 8.36 34.56 3.85
326 327 1.877165 GAAATCGCGTCCGGACCTC 60.877 63.158 28.52 18.76 34.56 3.85
327 328 3.366739 AAATCGCGTCCGGACCTCC 62.367 63.158 28.52 15.68 34.56 4.30
331 332 3.525545 GCGTCCGGACCTCCCTAC 61.526 72.222 28.52 1.93 0.00 3.18
332 333 3.207669 CGTCCGGACCTCCCTACG 61.208 72.222 28.52 11.39 36.24 3.51
336 337 2.832201 CGGACCTCCCTACGGACC 60.832 72.222 0.00 0.00 33.32 4.46
337 338 2.832201 GGACCTCCCTACGGACCG 60.832 72.222 13.61 13.61 33.32 4.79
338 339 2.273449 GACCTCCCTACGGACCGA 59.727 66.667 23.38 3.17 33.32 4.69
339 340 1.152798 GACCTCCCTACGGACCGAT 60.153 63.158 23.38 7.58 33.32 4.18
340 341 0.109342 GACCTCCCTACGGACCGATA 59.891 60.000 23.38 8.39 33.32 2.92
341 342 0.110104 ACCTCCCTACGGACCGATAG 59.890 60.000 23.38 17.10 33.32 2.08
342 343 0.399454 CCTCCCTACGGACCGATAGA 59.601 60.000 23.38 10.40 33.25 1.98
343 344 1.611148 CCTCCCTACGGACCGATAGAG 60.611 61.905 23.38 18.61 33.25 2.43
344 345 0.399454 TCCCTACGGACCGATAGAGG 59.601 60.000 23.38 19.15 31.87 3.69
345 346 0.399454 CCCTACGGACCGATAGAGGA 59.601 60.000 23.38 0.00 39.76 3.71
346 347 1.521580 CCTACGGACCGATAGAGGAC 58.478 60.000 23.38 0.00 39.76 3.85
347 348 1.072015 CCTACGGACCGATAGAGGACT 59.928 57.143 23.38 0.00 39.76 3.85
348 349 2.144730 CTACGGACCGATAGAGGACTG 58.855 57.143 23.38 0.00 38.11 3.51
349 350 0.255318 ACGGACCGATAGAGGACTGT 59.745 55.000 23.38 0.00 39.92 3.55
350 351 0.663688 CGGACCGATAGAGGACTGTG 59.336 60.000 8.64 0.00 39.76 3.66
351 352 1.765230 GGACCGATAGAGGACTGTGT 58.235 55.000 0.00 0.00 39.76 3.72
352 353 2.100989 GGACCGATAGAGGACTGTGTT 58.899 52.381 0.00 0.00 39.76 3.32
353 354 2.159226 GGACCGATAGAGGACTGTGTTG 60.159 54.545 0.00 0.00 39.76 3.33
354 355 1.825474 ACCGATAGAGGACTGTGTTGG 59.175 52.381 0.00 0.00 39.76 3.77
355 356 2.100197 CCGATAGAGGACTGTGTTGGA 58.900 52.381 0.00 0.00 39.76 3.53
356 357 2.695666 CCGATAGAGGACTGTGTTGGAT 59.304 50.000 0.00 0.00 39.76 3.41
357 358 3.491619 CCGATAGAGGACTGTGTTGGATG 60.492 52.174 0.00 0.00 39.76 3.51
358 359 3.381590 CGATAGAGGACTGTGTTGGATGA 59.618 47.826 0.00 0.00 39.76 2.92
359 360 4.688021 GATAGAGGACTGTGTTGGATGAC 58.312 47.826 0.00 0.00 0.00 3.06
360 361 2.614259 AGAGGACTGTGTTGGATGACT 58.386 47.619 0.00 0.00 0.00 3.41
361 362 2.975489 AGAGGACTGTGTTGGATGACTT 59.025 45.455 0.00 0.00 0.00 3.01
362 363 3.007398 AGAGGACTGTGTTGGATGACTTC 59.993 47.826 0.00 0.00 0.00 3.01
363 364 2.069273 GGACTGTGTTGGATGACTTCG 58.931 52.381 0.00 0.00 0.00 3.79
364 365 2.069273 GACTGTGTTGGATGACTTCGG 58.931 52.381 0.00 0.00 0.00 4.30
365 366 0.798776 CTGTGTTGGATGACTTCGGC 59.201 55.000 0.00 0.00 0.00 5.54
366 367 0.948623 TGTGTTGGATGACTTCGGCG 60.949 55.000 0.00 0.00 0.00 6.46
367 368 1.375396 TGTTGGATGACTTCGGCGG 60.375 57.895 7.21 0.00 0.00 6.13
368 369 1.375523 GTTGGATGACTTCGGCGGT 60.376 57.895 7.21 0.00 0.00 5.68
369 370 0.953960 GTTGGATGACTTCGGCGGTT 60.954 55.000 7.21 0.00 0.00 4.44
370 371 0.672401 TTGGATGACTTCGGCGGTTC 60.672 55.000 7.21 1.37 0.00 3.62
371 372 2.165301 GGATGACTTCGGCGGTTCG 61.165 63.158 7.21 0.00 0.00 3.95
372 373 2.125673 ATGACTTCGGCGGTTCGG 60.126 61.111 7.21 0.00 0.00 4.30
373 374 2.552585 GATGACTTCGGCGGTTCGGA 62.553 60.000 7.21 0.00 0.00 4.55
374 375 2.808321 GACTTCGGCGGTTCGGAC 60.808 66.667 7.21 0.00 0.00 4.79
375 376 4.712425 ACTTCGGCGGTTCGGACG 62.712 66.667 7.21 0.00 0.00 4.79
386 387 3.744719 TCGGACGGTTGCGAGAGG 61.745 66.667 0.00 0.00 41.16 3.69
387 388 4.052229 CGGACGGTTGCGAGAGGT 62.052 66.667 0.00 0.00 39.29 3.85
388 389 2.342648 GGACGGTTGCGAGAGGTT 59.657 61.111 0.00 0.00 0.00 3.50
389 390 1.301479 GGACGGTTGCGAGAGGTTT 60.301 57.895 0.00 0.00 0.00 3.27
390 391 1.566018 GGACGGTTGCGAGAGGTTTG 61.566 60.000 0.00 0.00 0.00 2.93
391 392 0.599204 GACGGTTGCGAGAGGTTTGA 60.599 55.000 0.00 0.00 0.00 2.69
392 393 0.034896 ACGGTTGCGAGAGGTTTGAT 59.965 50.000 0.00 0.00 0.00 2.57
393 394 0.443869 CGGTTGCGAGAGGTTTGATG 59.556 55.000 0.00 0.00 0.00 3.07
394 395 0.804989 GGTTGCGAGAGGTTTGATGG 59.195 55.000 0.00 0.00 0.00 3.51
395 396 1.523758 GTTGCGAGAGGTTTGATGGT 58.476 50.000 0.00 0.00 0.00 3.55
396 397 1.880027 GTTGCGAGAGGTTTGATGGTT 59.120 47.619 0.00 0.00 0.00 3.67
397 398 1.522668 TGCGAGAGGTTTGATGGTTG 58.477 50.000 0.00 0.00 0.00 3.77
398 399 0.804989 GCGAGAGGTTTGATGGTTGG 59.195 55.000 0.00 0.00 0.00 3.77
399 400 1.453155 CGAGAGGTTTGATGGTTGGG 58.547 55.000 0.00 0.00 0.00 4.12
400 401 1.839424 GAGAGGTTTGATGGTTGGGG 58.161 55.000 0.00 0.00 0.00 4.96
401 402 1.075536 GAGAGGTTTGATGGTTGGGGT 59.924 52.381 0.00 0.00 0.00 4.95
402 403 1.503347 AGAGGTTTGATGGTTGGGGTT 59.497 47.619 0.00 0.00 0.00 4.11
403 404 1.618343 GAGGTTTGATGGTTGGGGTTG 59.382 52.381 0.00 0.00 0.00 3.77
404 405 0.684535 GGTTTGATGGTTGGGGTTGG 59.315 55.000 0.00 0.00 0.00 3.77
405 406 1.710816 GTTTGATGGTTGGGGTTGGA 58.289 50.000 0.00 0.00 0.00 3.53
406 407 1.618343 GTTTGATGGTTGGGGTTGGAG 59.382 52.381 0.00 0.00 0.00 3.86
407 408 1.153539 TTGATGGTTGGGGTTGGAGA 58.846 50.000 0.00 0.00 0.00 3.71
408 409 1.381867 TGATGGTTGGGGTTGGAGAT 58.618 50.000 0.00 0.00 0.00 2.75
409 410 1.005805 TGATGGTTGGGGTTGGAGATG 59.994 52.381 0.00 0.00 0.00 2.90
410 411 0.324645 ATGGTTGGGGTTGGAGATGC 60.325 55.000 0.00 0.00 0.00 3.91
411 412 1.682344 GGTTGGGGTTGGAGATGCC 60.682 63.158 0.00 0.00 37.10 4.40
424 425 1.952296 GAGATGCCCTTACCATGCAAG 59.048 52.381 0.00 0.00 38.69 4.01
425 426 1.285962 AGATGCCCTTACCATGCAAGT 59.714 47.619 0.00 0.00 38.69 3.16
469 470 5.937540 TGAGAATTTTAGATTTGTGCCGAGA 59.062 36.000 0.00 0.00 0.00 4.04
470 471 6.128282 TGAGAATTTTAGATTTGTGCCGAGAC 60.128 38.462 0.00 0.00 0.00 3.36
471 472 4.965119 ATTTTAGATTTGTGCCGAGACC 57.035 40.909 0.00 0.00 0.00 3.85
472 473 2.396590 TTAGATTTGTGCCGAGACCC 57.603 50.000 0.00 0.00 0.00 4.46
473 474 1.271856 TAGATTTGTGCCGAGACCCA 58.728 50.000 0.00 0.00 0.00 4.51
474 475 0.620556 AGATTTGTGCCGAGACCCAT 59.379 50.000 0.00 0.00 0.00 4.00
475 476 1.837439 AGATTTGTGCCGAGACCCATA 59.163 47.619 0.00 0.00 0.00 2.74
476 477 2.238646 AGATTTGTGCCGAGACCCATAA 59.761 45.455 0.00 0.00 0.00 1.90
477 478 2.570415 TTTGTGCCGAGACCCATAAA 57.430 45.000 0.00 0.00 0.00 1.40
478 479 2.570415 TTGTGCCGAGACCCATAAAA 57.430 45.000 0.00 0.00 0.00 1.52
479 480 2.799126 TGTGCCGAGACCCATAAAAT 57.201 45.000 0.00 0.00 0.00 1.82
480 481 3.916359 TGTGCCGAGACCCATAAAATA 57.084 42.857 0.00 0.00 0.00 1.40
481 482 4.431416 TGTGCCGAGACCCATAAAATAT 57.569 40.909 0.00 0.00 0.00 1.28
482 483 5.554437 TGTGCCGAGACCCATAAAATATA 57.446 39.130 0.00 0.00 0.00 0.86
483 484 5.931294 TGTGCCGAGACCCATAAAATATAA 58.069 37.500 0.00 0.00 0.00 0.98
522 524 4.095410 TGAATTAGCACGAAATTGCCTG 57.905 40.909 0.00 0.00 44.14 4.85
527 529 1.888512 AGCACGAAATTGCCTGTTCAT 59.111 42.857 0.00 0.00 44.14 2.57
571 573 6.041423 GAAACATTTCCACCCATCAATCTT 57.959 37.500 0.00 0.00 0.00 2.40
576 578 5.467035 TTTCCACCCATCAATCTTGTTTC 57.533 39.130 0.00 0.00 0.00 2.78
577 579 3.430453 TCCACCCATCAATCTTGTTTCC 58.570 45.455 0.00 0.00 0.00 3.13
591 593 5.642686 TCTTGTTTCCGTTTAAACCAGTTG 58.357 37.500 12.66 0.00 38.35 3.16
600 602 4.675114 CGTTTAAACCAGTTGCTCATTGTC 59.325 41.667 12.66 0.00 0.00 3.18
663 697 2.278206 CTCCTCGTCGGTGCGATG 60.278 66.667 0.00 0.00 43.28 3.84
699 733 1.404391 GCATCTCATGGAAGCACCTTG 59.596 52.381 6.55 8.74 42.81 3.61
822 891 7.441760 TGGCAGTCGAAAACAATTTAACTACTA 59.558 33.333 0.00 0.00 0.00 1.82
826 895 8.909671 AGTCGAAAACAATTTAACTACTACTCG 58.090 33.333 0.00 0.00 0.00 4.18
846 915 2.934553 CGTAGTACACTCCTCATCGTCA 59.065 50.000 0.38 0.00 0.00 4.35
933 1003 1.990160 AAAGAAGGTCGCACCCACCA 61.990 55.000 2.18 0.00 39.75 4.17
974 1046 4.876107 AGTTAAGTCAACACTCAACACCAG 59.124 41.667 0.00 0.00 33.53 4.00
1155 1269 2.798501 CTACGGCGCCAACATCGTG 61.799 63.158 28.98 9.93 37.10 4.35
1194 1308 4.961511 GTCTGGTCCACGTGCGCA 62.962 66.667 5.66 5.66 0.00 6.09
1410 1527 1.524165 CAACACCACCGACGGGAAA 60.524 57.895 20.00 0.00 36.97 3.13
1434 1551 1.227853 GGTGAGCCAGGTGAACGTT 60.228 57.895 0.00 0.00 34.09 3.99
1587 1704 1.306568 GTTCCTCCTCTGCCTCCCT 60.307 63.158 0.00 0.00 0.00 4.20
2208 2352 2.435059 AAGAAGAAGCGGCTCGGC 60.435 61.111 1.45 0.00 0.00 5.54
2286 2436 2.221055 CGCCTAGACATTTTATGGTCGC 59.779 50.000 0.00 0.00 39.01 5.19
2290 2440 4.508124 CCTAGACATTTTATGGTCGCTGAC 59.492 45.833 0.00 0.79 39.01 3.51
2321 2471 7.440505 TCTGTATCTCTACTGAAGTACTCCT 57.559 40.000 0.00 0.00 34.15 3.69
2364 2517 7.988737 TGTTATTGATCTTGATCATGGTGTTC 58.011 34.615 13.26 2.91 0.00 3.18
2374 2527 3.329542 ATGGTGTTCGGCCTGCGAT 62.330 57.895 0.00 0.00 0.00 4.58
2528 2692 6.564557 TCCATTCGGGTATTAGTTTTACCT 57.435 37.500 0.00 0.00 39.30 3.08
2576 2740 9.763465 TTGTAAAGTTTTCTCTTAAGTCAAACG 57.237 29.630 1.63 0.00 34.57 3.60
2672 2866 3.638627 CAGGAAAATTAATCTGGAGCCCC 59.361 47.826 0.00 0.00 0.00 5.80
2701 2895 8.355913 AGGATTTCTCAGACAATTTTTCTGTTC 58.644 33.333 11.31 4.21 41.22 3.18
2702 2896 7.596621 GGATTTCTCAGACAATTTTTCTGTTCC 59.403 37.037 11.31 8.16 41.22 3.62
2703 2897 6.391227 TTCTCAGACAATTTTTCTGTTCCC 57.609 37.500 11.31 0.00 41.22 3.97
2704 2898 4.827284 TCTCAGACAATTTTTCTGTTCCCC 59.173 41.667 11.31 0.00 41.22 4.81
2705 2899 4.541705 TCAGACAATTTTTCTGTTCCCCA 58.458 39.130 11.31 0.00 41.22 4.96
2710 2911 7.282901 CAGACAATTTTTCTGTTCCCCATTTTT 59.717 33.333 4.68 0.00 36.50 1.94
2731 2932 7.489574 TTTTTGACCAAGCAATGTTATTTCC 57.510 32.000 0.00 0.00 0.00 3.13
2732 2933 6.418057 TTTGACCAAGCAATGTTATTTCCT 57.582 33.333 0.00 0.00 0.00 3.36
2733 2934 6.418057 TTGACCAAGCAATGTTATTTCCTT 57.582 33.333 0.00 0.00 0.00 3.36
2734 2935 6.024552 TGACCAAGCAATGTTATTTCCTTC 57.975 37.500 0.00 0.00 0.00 3.46
2735 2936 5.774690 TGACCAAGCAATGTTATTTCCTTCT 59.225 36.000 0.00 0.00 0.00 2.85
2736 2937 6.071952 TGACCAAGCAATGTTATTTCCTTCTC 60.072 38.462 0.00 0.00 0.00 2.87
2737 2938 6.012745 ACCAAGCAATGTTATTTCCTTCTCT 58.987 36.000 0.00 0.00 0.00 3.10
2738 2939 6.151817 ACCAAGCAATGTTATTTCCTTCTCTC 59.848 38.462 0.00 0.00 0.00 3.20
2739 2940 6.376581 CCAAGCAATGTTATTTCCTTCTCTCT 59.623 38.462 0.00 0.00 0.00 3.10
2740 2941 7.414984 CCAAGCAATGTTATTTCCTTCTCTCTC 60.415 40.741 0.00 0.00 0.00 3.20
2770 2971 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
2777 2978 4.377021 TCTCTCTCTCTCTCTCGTTATGC 58.623 47.826 0.00 0.00 0.00 3.14
2781 2982 2.609916 CTCTCTCTCTCGTTATGCGTGA 59.390 50.000 0.00 0.00 42.13 4.35
2785 2986 3.309138 TCTCTCTCGTTATGCGTGACTAC 59.691 47.826 0.00 0.00 42.13 2.73
2786 2987 3.004862 TCTCTCGTTATGCGTGACTACA 58.995 45.455 0.00 0.00 42.13 2.74
2821 3024 2.380064 ATTGCCCAAGGTGAGACAAA 57.620 45.000 0.00 0.00 0.00 2.83
2822 3025 2.151502 TTGCCCAAGGTGAGACAAAA 57.848 45.000 0.00 0.00 0.00 2.44
2833 3036 5.388654 AGGTGAGACAAAACAGGATTCAAT 58.611 37.500 0.00 0.00 0.00 2.57
2834 3037 6.542821 AGGTGAGACAAAACAGGATTCAATA 58.457 36.000 0.00 0.00 0.00 1.90
2835 3038 7.177878 AGGTGAGACAAAACAGGATTCAATAT 58.822 34.615 0.00 0.00 0.00 1.28
2836 3039 7.337942 AGGTGAGACAAAACAGGATTCAATATC 59.662 37.037 0.00 0.00 0.00 1.63
2837 3040 7.121168 GGTGAGACAAAACAGGATTCAATATCA 59.879 37.037 0.00 0.00 0.00 2.15
2838 3041 8.180267 GTGAGACAAAACAGGATTCAATATCAG 58.820 37.037 0.00 0.00 0.00 2.90
2839 3042 7.884877 TGAGACAAAACAGGATTCAATATCAGT 59.115 33.333 0.00 0.00 0.00 3.41
2840 3043 9.383519 GAGACAAAACAGGATTCAATATCAGTA 57.616 33.333 0.00 0.00 0.00 2.74
2841 3044 9.739276 AGACAAAACAGGATTCAATATCAGTAA 57.261 29.630 0.00 0.00 0.00 2.24
2842 3045 9.774742 GACAAAACAGGATTCAATATCAGTAAC 57.225 33.333 0.00 0.00 0.00 2.50
2843 3046 9.295825 ACAAAACAGGATTCAATATCAGTAACA 57.704 29.630 0.00 0.00 0.00 2.41
2844 3047 9.559958 CAAAACAGGATTCAATATCAGTAACAC 57.440 33.333 0.00 0.00 0.00 3.32
2845 3048 7.865706 AACAGGATTCAATATCAGTAACACC 57.134 36.000 0.00 0.00 0.00 4.16
2846 3049 6.357367 ACAGGATTCAATATCAGTAACACCC 58.643 40.000 0.00 0.00 0.00 4.61
2847 3050 5.765182 CAGGATTCAATATCAGTAACACCCC 59.235 44.000 0.00 0.00 0.00 4.95
2848 3051 5.070685 GGATTCAATATCAGTAACACCCCC 58.929 45.833 0.00 0.00 0.00 5.40
2869 3072 7.475137 CCCCCATTTAACAGTTGAAATCTAA 57.525 36.000 0.00 0.00 0.00 2.10
2870 3073 7.547227 CCCCCATTTAACAGTTGAAATCTAAG 58.453 38.462 0.00 0.00 0.00 2.18
2871 3074 7.035612 CCCCATTTAACAGTTGAAATCTAAGC 58.964 38.462 0.00 0.00 0.00 3.09
2872 3075 7.093771 CCCCATTTAACAGTTGAAATCTAAGCT 60.094 37.037 0.00 0.00 0.00 3.74
2873 3076 8.956426 CCCATTTAACAGTTGAAATCTAAGCTA 58.044 33.333 0.00 0.00 0.00 3.32
2880 3083 8.621532 ACAGTTGAAATCTAAGCTATTTGACA 57.378 30.769 0.00 0.00 0.00 3.58
2881 3084 8.507249 ACAGTTGAAATCTAAGCTATTTGACAC 58.493 33.333 0.00 0.00 0.00 3.67
2882 3085 8.725148 CAGTTGAAATCTAAGCTATTTGACACT 58.275 33.333 0.00 0.00 0.00 3.55
2883 3086 8.725148 AGTTGAAATCTAAGCTATTTGACACTG 58.275 33.333 0.00 0.00 0.00 3.66
2884 3087 7.076842 TGAAATCTAAGCTATTTGACACTGC 57.923 36.000 0.00 0.00 0.00 4.40
2885 3088 6.094048 TGAAATCTAAGCTATTTGACACTGCC 59.906 38.462 0.00 0.00 0.00 4.85
2886 3089 4.826274 TCTAAGCTATTTGACACTGCCT 57.174 40.909 0.00 0.00 0.00 4.75
2887 3090 5.165961 TCTAAGCTATTTGACACTGCCTT 57.834 39.130 0.00 0.00 0.00 4.35
2888 3091 6.294361 TCTAAGCTATTTGACACTGCCTTA 57.706 37.500 0.00 0.00 0.00 2.69
2889 3092 6.106673 TCTAAGCTATTTGACACTGCCTTAC 58.893 40.000 0.00 0.00 0.00 2.34
2890 3093 4.559862 AGCTATTTGACACTGCCTTACT 57.440 40.909 0.00 0.00 0.00 2.24
2891 3094 5.677319 AGCTATTTGACACTGCCTTACTA 57.323 39.130 0.00 0.00 0.00 1.82
2892 3095 6.240549 AGCTATTTGACACTGCCTTACTAT 57.759 37.500 0.00 0.00 0.00 2.12
2893 3096 6.653989 AGCTATTTGACACTGCCTTACTATT 58.346 36.000 0.00 0.00 0.00 1.73
2894 3097 6.540189 AGCTATTTGACACTGCCTTACTATTG 59.460 38.462 0.00 0.00 0.00 1.90
2895 3098 6.316390 GCTATTTGACACTGCCTTACTATTGT 59.684 38.462 0.00 0.00 0.00 2.71
2896 3099 7.494625 GCTATTTGACACTGCCTTACTATTGTA 59.505 37.037 0.00 0.00 0.00 2.41
2897 3100 9.547753 CTATTTGACACTGCCTTACTATTGTAT 57.452 33.333 0.00 0.00 0.00 2.29
2898 3101 8.807948 ATTTGACACTGCCTTACTATTGTATT 57.192 30.769 0.00 0.00 0.00 1.89
2899 3102 9.899661 ATTTGACACTGCCTTACTATTGTATTA 57.100 29.630 0.00 0.00 0.00 0.98
2900 3103 8.942338 TTGACACTGCCTTACTATTGTATTAG 57.058 34.615 0.00 0.00 0.00 1.73
2901 3104 8.074613 TGACACTGCCTTACTATTGTATTAGT 57.925 34.615 0.00 0.00 36.43 2.24
2902 3105 9.192642 TGACACTGCCTTACTATTGTATTAGTA 57.807 33.333 0.00 0.00 34.35 1.82
2936 3139 9.462606 ACATCTTTTCCTATTTGTTTAGTAGGG 57.537 33.333 0.00 0.00 36.47 3.53
2937 3140 8.903820 CATCTTTTCCTATTTGTTTAGTAGGGG 58.096 37.037 0.00 0.00 36.47 4.79
2938 3141 7.992295 TCTTTTCCTATTTGTTTAGTAGGGGT 58.008 34.615 0.00 0.00 36.47 4.95
2939 3142 8.450434 TCTTTTCCTATTTGTTTAGTAGGGGTT 58.550 33.333 0.00 0.00 36.47 4.11
2940 3143 8.640063 TTTTCCTATTTGTTTAGTAGGGGTTC 57.360 34.615 0.00 0.00 36.47 3.62
2941 3144 6.317663 TCCTATTTGTTTAGTAGGGGTTCC 57.682 41.667 0.00 0.00 36.47 3.62
2942 3145 5.192321 TCCTATTTGTTTAGTAGGGGTTCCC 59.808 44.000 0.00 0.00 45.90 3.97
2951 3154 4.736739 GGGGTTCCCTAGTGCAAC 57.263 61.111 7.87 0.00 41.34 4.17
2952 3155 1.765074 GGGGTTCCCTAGTGCAACA 59.235 57.895 7.87 0.00 41.34 3.33
2953 3156 0.331616 GGGGTTCCCTAGTGCAACAT 59.668 55.000 7.87 0.00 41.34 2.71
2954 3157 1.272480 GGGGTTCCCTAGTGCAACATT 60.272 52.381 7.87 0.00 41.34 2.71
2955 3158 2.525368 GGGTTCCCTAGTGCAACATTT 58.475 47.619 0.00 0.00 41.43 2.32
2956 3159 2.231235 GGGTTCCCTAGTGCAACATTTG 59.769 50.000 0.00 0.00 41.43 2.32
2957 3160 2.890945 GGTTCCCTAGTGCAACATTTGT 59.109 45.455 0.00 0.00 41.43 2.83
2958 3161 3.320826 GGTTCCCTAGTGCAACATTTGTT 59.679 43.478 0.00 0.00 41.43 2.83
2971 3174 6.702972 CAACATTTGTTGTTTCACTTCACA 57.297 33.333 13.95 0.00 46.51 3.58
2972 3175 7.293402 CAACATTTGTTGTTTCACTTCACAT 57.707 32.000 13.95 0.00 46.51 3.21
2973 3176 6.890663 ACATTTGTTGTTTCACTTCACATG 57.109 33.333 0.00 0.00 33.74 3.21
2974 3177 5.291614 ACATTTGTTGTTTCACTTCACATGC 59.708 36.000 0.00 0.00 33.74 4.06
2975 3178 3.435105 TGTTGTTTCACTTCACATGCC 57.565 42.857 0.00 0.00 0.00 4.40
2976 3179 3.023119 TGTTGTTTCACTTCACATGCCT 58.977 40.909 0.00 0.00 0.00 4.75
2977 3180 3.066621 TGTTGTTTCACTTCACATGCCTC 59.933 43.478 0.00 0.00 0.00 4.70
2978 3181 1.872952 TGTTTCACTTCACATGCCTCG 59.127 47.619 0.00 0.00 0.00 4.63
2979 3182 1.197721 GTTTCACTTCACATGCCTCGG 59.802 52.381 0.00 0.00 0.00 4.63
2980 3183 0.321564 TTCACTTCACATGCCTCGGG 60.322 55.000 0.00 0.00 0.00 5.14
2981 3184 1.191489 TCACTTCACATGCCTCGGGA 61.191 55.000 0.00 0.00 0.00 5.14
2982 3185 0.321564 CACTTCACATGCCTCGGGAA 60.322 55.000 0.00 0.00 0.00 3.97
2983 3186 0.620556 ACTTCACATGCCTCGGGAAT 59.379 50.000 0.00 0.00 0.00 3.01
2984 3187 1.019673 CTTCACATGCCTCGGGAATG 58.980 55.000 8.85 8.85 0.00 2.67
2985 3188 0.327924 TTCACATGCCTCGGGAATGT 59.672 50.000 9.98 9.98 0.00 2.71
2986 3189 0.327924 TCACATGCCTCGGGAATGTT 59.672 50.000 12.47 0.00 0.00 2.71
2987 3190 0.734889 CACATGCCTCGGGAATGTTC 59.265 55.000 12.47 0.00 0.00 3.18
2988 3191 0.620556 ACATGCCTCGGGAATGTTCT 59.379 50.000 9.98 0.00 0.00 3.01
2989 3192 1.837439 ACATGCCTCGGGAATGTTCTA 59.163 47.619 9.98 0.00 0.00 2.10
2990 3193 2.238646 ACATGCCTCGGGAATGTTCTAA 59.761 45.455 9.98 0.00 0.00 2.10
2991 3194 3.117888 ACATGCCTCGGGAATGTTCTAAT 60.118 43.478 9.98 0.00 0.00 1.73
2992 3195 2.917933 TGCCTCGGGAATGTTCTAATG 58.082 47.619 0.00 0.00 0.00 1.90
2993 3196 2.503765 TGCCTCGGGAATGTTCTAATGA 59.496 45.455 0.00 0.00 0.00 2.57
2994 3197 2.872858 GCCTCGGGAATGTTCTAATGAC 59.127 50.000 0.00 0.00 0.00 3.06
2995 3198 3.681594 GCCTCGGGAATGTTCTAATGACA 60.682 47.826 0.00 0.00 0.00 3.58
2996 3199 4.513442 CCTCGGGAATGTTCTAATGACAA 58.487 43.478 0.00 0.00 0.00 3.18
2997 3200 5.126067 CCTCGGGAATGTTCTAATGACAAT 58.874 41.667 0.00 0.00 0.00 2.71
2998 3201 5.008019 CCTCGGGAATGTTCTAATGACAATG 59.992 44.000 0.00 0.00 0.00 2.82
2999 3202 5.739959 TCGGGAATGTTCTAATGACAATGA 58.260 37.500 0.00 0.00 0.00 2.57
3000 3203 5.817296 TCGGGAATGTTCTAATGACAATGAG 59.183 40.000 0.00 0.00 0.00 2.90
3001 3204 5.008019 CGGGAATGTTCTAATGACAATGAGG 59.992 44.000 0.00 0.00 0.00 3.86
3002 3205 6.122277 GGGAATGTTCTAATGACAATGAGGA 58.878 40.000 0.00 0.00 0.00 3.71
3003 3206 6.774656 GGGAATGTTCTAATGACAATGAGGAT 59.225 38.462 0.00 0.00 0.00 3.24
3004 3207 7.255381 GGGAATGTTCTAATGACAATGAGGATG 60.255 40.741 0.00 0.00 0.00 3.51
3005 3208 7.500227 GGAATGTTCTAATGACAATGAGGATGA 59.500 37.037 0.00 0.00 0.00 2.92
3006 3209 7.798596 ATGTTCTAATGACAATGAGGATGAC 57.201 36.000 0.00 0.00 0.00 3.06
3007 3210 5.812127 TGTTCTAATGACAATGAGGATGACG 59.188 40.000 0.00 0.00 0.00 4.35
3008 3211 5.598416 TCTAATGACAATGAGGATGACGT 57.402 39.130 0.00 0.00 0.00 4.34
3009 3212 5.977635 TCTAATGACAATGAGGATGACGTT 58.022 37.500 0.00 0.00 0.00 3.99
3010 3213 4.952262 AATGACAATGAGGATGACGTTG 57.048 40.909 0.00 0.00 0.00 4.10
3011 3214 2.698803 TGACAATGAGGATGACGTTGG 58.301 47.619 0.00 0.00 0.00 3.77
3012 3215 2.038426 TGACAATGAGGATGACGTTGGT 59.962 45.455 0.00 0.00 0.00 3.67
3013 3216 2.416547 GACAATGAGGATGACGTTGGTG 59.583 50.000 0.00 0.00 0.00 4.17
3014 3217 2.038426 ACAATGAGGATGACGTTGGTGA 59.962 45.455 0.00 0.00 0.00 4.02
3015 3218 3.273434 CAATGAGGATGACGTTGGTGAT 58.727 45.455 0.00 0.00 0.00 3.06
3016 3219 2.385013 TGAGGATGACGTTGGTGATG 57.615 50.000 0.00 0.00 0.00 3.07
3017 3220 1.066215 TGAGGATGACGTTGGTGATGG 60.066 52.381 0.00 0.00 0.00 3.51
3018 3221 0.253044 AGGATGACGTTGGTGATGGG 59.747 55.000 0.00 0.00 0.00 4.00
3019 3222 0.251916 GGATGACGTTGGTGATGGGA 59.748 55.000 0.00 0.00 0.00 4.37
3020 3223 1.134098 GGATGACGTTGGTGATGGGAT 60.134 52.381 0.00 0.00 0.00 3.85
3021 3224 2.104111 GGATGACGTTGGTGATGGGATA 59.896 50.000 0.00 0.00 0.00 2.59
3022 3225 2.684001 TGACGTTGGTGATGGGATAC 57.316 50.000 0.00 0.00 0.00 2.24
3026 3229 2.503765 ACGTTGGTGATGGGATACATGA 59.496 45.455 0.00 0.00 40.72 3.07
3044 3247 1.406898 TGAGGCACTAGAAGAGATGCG 59.593 52.381 0.00 0.00 41.55 4.73
3045 3248 0.749649 AGGCACTAGAAGAGATGCGG 59.250 55.000 0.00 0.00 39.02 5.69
3073 3276 1.066430 GGTAGGGCATGTCGACAAAGA 60.066 52.381 24.13 0.00 0.00 2.52
3082 3285 0.670854 GTCGACAAAGAGGAGGTGGC 60.671 60.000 11.55 0.00 0.00 5.01
3095 3298 2.105128 GTGGCGGGTCATCTCGAG 59.895 66.667 5.93 5.93 0.00 4.04
3104 3307 3.729966 GGGTCATCTCGAGGTAAAATCC 58.270 50.000 13.56 0.24 0.00 3.01
3105 3308 3.381949 GGTCATCTCGAGGTAAAATCCG 58.618 50.000 13.56 0.00 0.00 4.18
3111 3314 1.205417 TCGAGGTAAAATCCGACCACC 59.795 52.381 0.00 0.00 38.27 4.61
3127 3330 4.814771 CGACCACCTTTTCATAGTATTCCC 59.185 45.833 0.00 0.00 0.00 3.97
3128 3331 4.777463 ACCACCTTTTCATAGTATTCCCG 58.223 43.478 0.00 0.00 0.00 5.14
3200 3403 7.678947 TGCTAAAGTTACTAGACTACTCGTT 57.321 36.000 0.00 0.00 0.00 3.85
3212 3416 8.046107 ACTAGACTACTCGTTCTAAGTTACCAT 58.954 37.037 0.00 0.00 0.00 3.55
3213 3417 9.539825 CTAGACTACTCGTTCTAAGTTACCATA 57.460 37.037 0.00 0.00 0.00 2.74
3246 3450 0.035056 AGTTACCAGTCTGCCCATGC 60.035 55.000 0.00 0.00 38.26 4.06
3247 3451 0.035056 GTTACCAGTCTGCCCATGCT 60.035 55.000 0.00 0.00 38.71 3.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 1.874915 CCATTGCGCCGCATTGAAG 60.875 57.895 29.25 13.87 40.83 3.02
2 3 2.181273 CCATTGCGCCGCATTGAA 59.819 55.556 29.25 9.58 40.83 2.69
3 4 4.495336 GCCATTGCGCCGCATTGA 62.495 61.111 29.25 9.96 40.83 2.57
11 12 4.481112 CAAGTCCGGCCATTGCGC 62.481 66.667 2.24 0.00 38.85 6.09
12 13 3.814268 CCAAGTCCGGCCATTGCG 61.814 66.667 2.24 0.00 38.85 4.85
13 14 2.212900 GAACCAAGTCCGGCCATTGC 62.213 60.000 2.24 0.00 0.00 3.56
14 15 1.595093 GGAACCAAGTCCGGCCATTG 61.595 60.000 2.24 0.90 0.00 2.82
15 16 1.304134 GGAACCAAGTCCGGCCATT 60.304 57.895 2.24 0.00 0.00 3.16
16 17 2.198304 GAGGAACCAAGTCCGGCCAT 62.198 60.000 2.24 0.00 43.03 4.40
17 18 2.852075 AGGAACCAAGTCCGGCCA 60.852 61.111 2.24 0.00 43.03 5.36
18 19 2.046217 GAGGAACCAAGTCCGGCC 60.046 66.667 0.00 0.00 43.03 6.13
19 20 1.376037 CTGAGGAACCAAGTCCGGC 60.376 63.158 0.00 0.00 43.03 6.13
20 21 1.192146 TCCTGAGGAACCAAGTCCGG 61.192 60.000 0.00 0.00 43.03 5.14
21 22 0.685097 TTCCTGAGGAACCAAGTCCG 59.315 55.000 10.46 0.00 43.03 4.79
30 31 1.671742 GACGCAGGTTCCTGAGGAA 59.328 57.895 21.32 10.46 39.66 3.36
31 32 2.283529 GGACGCAGGTTCCTGAGGA 61.284 63.158 21.32 0.00 38.01 3.71
32 33 2.266055 GGACGCAGGTTCCTGAGG 59.734 66.667 21.32 14.05 38.01 3.86
33 34 2.125912 CGGACGCAGGTTCCTGAG 60.126 66.667 21.32 19.73 39.26 3.35
34 35 4.373116 GCGGACGCAGGTTCCTGA 62.373 66.667 21.32 0.00 41.49 3.86
44 45 2.099062 CTGCTTCAATGCGGACGC 59.901 61.111 10.13 10.13 41.56 5.19
45 46 0.238289 AAACTGCTTCAATGCGGACG 59.762 50.000 2.13 0.00 41.56 4.79
46 47 1.537202 AGAAACTGCTTCAATGCGGAC 59.463 47.619 2.13 0.00 41.56 4.79
47 48 1.896220 AGAAACTGCTTCAATGCGGA 58.104 45.000 2.13 0.00 41.56 5.54
48 49 2.159517 GGTAGAAACTGCTTCAATGCGG 60.160 50.000 0.00 0.00 44.34 5.69
49 50 2.483877 TGGTAGAAACTGCTTCAATGCG 59.516 45.455 0.00 0.00 36.40 4.73
50 51 4.216257 TCTTGGTAGAAACTGCTTCAATGC 59.784 41.667 0.00 0.00 36.40 3.56
51 52 5.106396 CCTCTTGGTAGAAACTGCTTCAATG 60.106 44.000 0.00 0.00 36.40 2.82
52 53 5.006386 CCTCTTGGTAGAAACTGCTTCAAT 58.994 41.667 0.00 0.00 36.40 2.57
53 54 4.141482 ACCTCTTGGTAGAAACTGCTTCAA 60.141 41.667 0.00 0.00 46.43 2.69
54 55 3.391296 ACCTCTTGGTAGAAACTGCTTCA 59.609 43.478 0.00 0.00 46.43 3.02
55 56 4.009370 ACCTCTTGGTAGAAACTGCTTC 57.991 45.455 0.00 0.00 46.43 3.86
68 69 3.966026 GACCGACGCGACCTCTTGG 62.966 68.421 15.93 5.62 39.83 3.61
69 70 2.504244 GACCGACGCGACCTCTTG 60.504 66.667 15.93 0.00 0.00 3.02
70 71 2.979197 CTGACCGACGCGACCTCTT 61.979 63.158 15.93 0.00 0.00 2.85
71 72 3.432588 CTGACCGACGCGACCTCT 61.433 66.667 15.93 0.00 0.00 3.69
93 94 2.446802 ATCGGAGGAAGGGAGGGC 60.447 66.667 0.00 0.00 0.00 5.19
94 95 1.075226 TGATCGGAGGAAGGGAGGG 60.075 63.158 0.00 0.00 0.00 4.30
95 96 0.687757 TGTGATCGGAGGAAGGGAGG 60.688 60.000 0.00 0.00 0.00 4.30
96 97 1.418334 ATGTGATCGGAGGAAGGGAG 58.582 55.000 0.00 0.00 0.00 4.30
97 98 1.486310 CAATGTGATCGGAGGAAGGGA 59.514 52.381 0.00 0.00 0.00 4.20
98 99 1.959042 CAATGTGATCGGAGGAAGGG 58.041 55.000 0.00 0.00 0.00 3.95
99 100 1.303309 GCAATGTGATCGGAGGAAGG 58.697 55.000 0.00 0.00 0.00 3.46
100 101 1.667724 GTGCAATGTGATCGGAGGAAG 59.332 52.381 0.00 0.00 0.00 3.46
101 102 1.678728 GGTGCAATGTGATCGGAGGAA 60.679 52.381 0.00 0.00 0.00 3.36
102 103 0.107703 GGTGCAATGTGATCGGAGGA 60.108 55.000 0.00 0.00 0.00 3.71
103 104 0.392863 TGGTGCAATGTGATCGGAGG 60.393 55.000 0.00 0.00 0.00 4.30
104 105 1.600957 GATGGTGCAATGTGATCGGAG 59.399 52.381 0.00 0.00 0.00 4.63
105 106 1.065564 TGATGGTGCAATGTGATCGGA 60.066 47.619 0.00 0.00 0.00 4.55
106 107 1.381522 TGATGGTGCAATGTGATCGG 58.618 50.000 0.00 0.00 0.00 4.18
107 108 3.368495 CATTGATGGTGCAATGTGATCG 58.632 45.455 8.50 0.00 46.22 3.69
114 115 0.177141 GCTGGCATTGATGGTGCAAT 59.823 50.000 0.00 0.00 44.25 3.56
115 116 1.592743 GCTGGCATTGATGGTGCAA 59.407 52.632 0.00 0.00 44.25 4.08
116 117 2.352821 GGCTGGCATTGATGGTGCA 61.353 57.895 0.00 0.00 44.25 4.57
117 118 1.610554 AAGGCTGGCATTGATGGTGC 61.611 55.000 3.38 0.00 41.78 5.01
118 119 0.174845 CAAGGCTGGCATTGATGGTG 59.825 55.000 13.64 0.00 39.72 4.17
119 120 0.974010 CCAAGGCTGGCATTGATGGT 60.974 55.000 19.30 0.00 39.72 3.55
120 121 1.820581 CCAAGGCTGGCATTGATGG 59.179 57.895 19.30 2.16 39.72 3.51
129 130 0.465097 CCAGAGCATACCAAGGCTGG 60.465 60.000 0.00 0.00 44.23 4.85
130 131 0.465097 CCCAGAGCATACCAAGGCTG 60.465 60.000 0.00 0.00 44.23 4.85
132 133 1.825622 GCCCAGAGCATACCAAGGC 60.826 63.158 0.00 0.00 42.97 4.35
133 134 1.152881 GGCCCAGAGCATACCAAGG 60.153 63.158 0.00 0.00 46.50 3.61
134 135 1.524621 CGGCCCAGAGCATACCAAG 60.525 63.158 0.00 0.00 46.50 3.61
135 136 2.589540 CGGCCCAGAGCATACCAA 59.410 61.111 0.00 0.00 46.50 3.67
136 137 2.882403 TACCGGCCCAGAGCATACCA 62.882 60.000 0.00 0.00 46.50 3.25
137 138 1.481056 ATACCGGCCCAGAGCATACC 61.481 60.000 0.00 0.00 46.50 2.73
138 139 0.320771 CATACCGGCCCAGAGCATAC 60.321 60.000 0.00 0.00 46.50 2.39
139 140 0.471022 TCATACCGGCCCAGAGCATA 60.471 55.000 0.00 0.00 46.50 3.14
140 141 1.344953 TTCATACCGGCCCAGAGCAT 61.345 55.000 0.00 0.00 46.50 3.79
141 142 1.344953 ATTCATACCGGCCCAGAGCA 61.345 55.000 0.00 0.00 46.50 4.26
142 143 0.886490 CATTCATACCGGCCCAGAGC 60.886 60.000 0.00 0.00 42.60 4.09
143 144 0.886490 GCATTCATACCGGCCCAGAG 60.886 60.000 0.00 0.00 0.00 3.35
144 145 1.148273 GCATTCATACCGGCCCAGA 59.852 57.895 0.00 0.00 0.00 3.86
145 146 2.253758 CGCATTCATACCGGCCCAG 61.254 63.158 0.00 0.00 0.00 4.45
146 147 2.203139 CGCATTCATACCGGCCCA 60.203 61.111 0.00 0.00 0.00 5.36
147 148 2.978010 CCGCATTCATACCGGCCC 60.978 66.667 0.00 0.00 35.14 5.80
150 151 4.012895 GCGCCGCATTCATACCGG 62.013 66.667 3.15 0.00 44.58 5.28
151 152 4.354212 CGCGCCGCATTCATACCG 62.354 66.667 10.75 0.00 0.00 4.02
152 153 4.012895 CCGCGCCGCATTCATACC 62.013 66.667 10.75 0.00 0.00 2.73
153 154 1.492319 TTACCGCGCCGCATTCATAC 61.492 55.000 10.75 0.00 0.00 2.39
154 155 1.218875 CTTACCGCGCCGCATTCATA 61.219 55.000 10.75 0.00 0.00 2.15
155 156 2.512745 TTACCGCGCCGCATTCAT 60.513 55.556 10.75 0.00 0.00 2.57
156 157 3.192230 CTTACCGCGCCGCATTCA 61.192 61.111 10.75 0.00 0.00 2.57
157 158 4.591317 GCTTACCGCGCCGCATTC 62.591 66.667 10.75 0.00 0.00 2.67
166 167 4.143363 GAACACGCCGCTTACCGC 62.143 66.667 0.00 0.00 35.03 5.68
167 168 2.020836 GATGAACACGCCGCTTACCG 62.021 60.000 0.00 0.00 0.00 4.02
168 169 1.713830 GATGAACACGCCGCTTACC 59.286 57.895 0.00 0.00 0.00 2.85
169 170 1.343821 CGATGAACACGCCGCTTAC 59.656 57.895 0.00 0.00 0.00 2.34
170 171 1.807981 CCGATGAACACGCCGCTTA 60.808 57.895 0.00 0.00 0.00 3.09
171 172 3.118454 CCGATGAACACGCCGCTT 61.118 61.111 0.00 0.00 0.00 4.68
172 173 3.583276 TTCCGATGAACACGCCGCT 62.583 57.895 0.00 0.00 0.00 5.52
173 174 3.083600 CTTCCGATGAACACGCCGC 62.084 63.158 0.00 0.00 0.00 6.53
174 175 2.452813 CCTTCCGATGAACACGCCG 61.453 63.158 0.00 0.00 0.00 6.46
175 176 0.672401 TTCCTTCCGATGAACACGCC 60.672 55.000 0.00 0.00 0.00 5.68
176 177 1.128692 CTTTCCTTCCGATGAACACGC 59.871 52.381 0.00 0.00 0.00 5.34
177 178 1.128692 GCTTTCCTTCCGATGAACACG 59.871 52.381 0.00 0.00 0.00 4.49
178 179 1.128692 CGCTTTCCTTCCGATGAACAC 59.871 52.381 0.00 0.00 0.00 3.32
179 180 1.438651 CGCTTTCCTTCCGATGAACA 58.561 50.000 0.00 0.00 0.00 3.18
180 181 0.097150 GCGCTTTCCTTCCGATGAAC 59.903 55.000 0.00 0.00 0.00 3.18
181 182 1.358725 CGCGCTTTCCTTCCGATGAA 61.359 55.000 5.56 0.00 0.00 2.57
182 183 1.809619 CGCGCTTTCCTTCCGATGA 60.810 57.895 5.56 0.00 0.00 2.92
183 184 2.703409 CGCGCTTTCCTTCCGATG 59.297 61.111 5.56 0.00 0.00 3.84
184 185 2.511600 CCGCGCTTTCCTTCCGAT 60.512 61.111 5.56 0.00 0.00 4.18
185 186 4.752879 CCCGCGCTTTCCTTCCGA 62.753 66.667 5.56 0.00 0.00 4.55
186 187 4.752879 TCCCGCGCTTTCCTTCCG 62.753 66.667 5.56 0.00 0.00 4.30
187 188 2.820037 CTCCCGCGCTTTCCTTCC 60.820 66.667 5.56 0.00 0.00 3.46
188 189 2.820037 CCTCCCGCGCTTTCCTTC 60.820 66.667 5.56 0.00 0.00 3.46
189 190 4.410400 CCCTCCCGCGCTTTCCTT 62.410 66.667 5.56 0.00 0.00 3.36
205 206 4.960866 AAAACCCGTCACCCGCCC 62.961 66.667 0.00 0.00 34.38 6.13
206 207 2.908428 AAAAACCCGTCACCCGCC 60.908 61.111 0.00 0.00 34.38 6.13
207 208 1.520600 ATCAAAAACCCGTCACCCGC 61.521 55.000 0.00 0.00 34.38 6.13
208 209 0.239879 CATCAAAAACCCGTCACCCG 59.760 55.000 0.00 0.00 0.00 5.28
209 210 0.601057 CCATCAAAAACCCGTCACCC 59.399 55.000 0.00 0.00 0.00 4.61
210 211 0.601057 CCCATCAAAAACCCGTCACC 59.399 55.000 0.00 0.00 0.00 4.02
211 212 1.268625 GTCCCATCAAAAACCCGTCAC 59.731 52.381 0.00 0.00 0.00 3.67
212 213 1.133761 TGTCCCATCAAAAACCCGTCA 60.134 47.619 0.00 0.00 0.00 4.35
213 214 1.539827 CTGTCCCATCAAAAACCCGTC 59.460 52.381 0.00 0.00 0.00 4.79
214 215 1.616159 CTGTCCCATCAAAAACCCGT 58.384 50.000 0.00 0.00 0.00 5.28
215 216 0.887933 CCTGTCCCATCAAAAACCCG 59.112 55.000 0.00 0.00 0.00 5.28
216 217 1.266178 CCCTGTCCCATCAAAAACCC 58.734 55.000 0.00 0.00 0.00 4.11
217 218 0.608130 GCCCTGTCCCATCAAAAACC 59.392 55.000 0.00 0.00 0.00 3.27
218 219 0.243636 CGCCCTGTCCCATCAAAAAC 59.756 55.000 0.00 0.00 0.00 2.43
219 220 0.897863 CCGCCCTGTCCCATCAAAAA 60.898 55.000 0.00 0.00 0.00 1.94
220 221 1.304052 CCGCCCTGTCCCATCAAAA 60.304 57.895 0.00 0.00 0.00 2.44
221 222 2.354729 CCGCCCTGTCCCATCAAA 59.645 61.111 0.00 0.00 0.00 2.69
222 223 2.933287 ACCGCCCTGTCCCATCAA 60.933 61.111 0.00 0.00 0.00 2.57
223 224 3.399181 GACCGCCCTGTCCCATCA 61.399 66.667 0.00 0.00 0.00 3.07
224 225 3.391665 CTGACCGCCCTGTCCCATC 62.392 68.421 0.00 0.00 34.25 3.51
225 226 3.402681 CTGACCGCCCTGTCCCAT 61.403 66.667 0.00 0.00 34.25 4.00
226 227 4.631740 TCTGACCGCCCTGTCCCA 62.632 66.667 0.00 0.00 34.25 4.37
227 228 3.316573 CTTCTGACCGCCCTGTCCC 62.317 68.421 0.00 0.00 34.25 4.46
228 229 2.266055 CTTCTGACCGCCCTGTCC 59.734 66.667 0.00 0.00 34.25 4.02
229 230 2.435059 GCTTCTGACCGCCCTGTC 60.435 66.667 0.00 0.00 35.77 3.51
230 231 4.379243 CGCTTCTGACCGCCCTGT 62.379 66.667 0.00 0.00 0.00 4.00
264 265 1.079057 GAGAGGTTTGCGGGAGTCC 60.079 63.158 0.00 0.00 0.00 3.85
265 266 0.108567 GAGAGAGGTTTGCGGGAGTC 60.109 60.000 0.00 0.00 0.00 3.36
266 267 0.832135 TGAGAGAGGTTTGCGGGAGT 60.832 55.000 0.00 0.00 0.00 3.85
267 268 0.539051 ATGAGAGAGGTTTGCGGGAG 59.461 55.000 0.00 0.00 0.00 4.30
268 269 0.250234 CATGAGAGAGGTTTGCGGGA 59.750 55.000 0.00 0.00 0.00 5.14
269 270 0.036010 ACATGAGAGAGGTTTGCGGG 60.036 55.000 0.00 0.00 0.00 6.13
270 271 1.813513 AACATGAGAGAGGTTTGCGG 58.186 50.000 0.00 0.00 0.00 5.69
271 272 3.193157 CAAACATGAGAGAGGTTTGCG 57.807 47.619 0.00 0.00 46.15 4.85
274 275 4.137543 GGACACAAACATGAGAGAGGTTT 58.862 43.478 0.00 0.00 39.12 3.27
275 276 3.136443 TGGACACAAACATGAGAGAGGTT 59.864 43.478 0.00 0.00 0.00 3.50
276 277 2.705658 TGGACACAAACATGAGAGAGGT 59.294 45.455 0.00 0.00 0.00 3.85
277 278 3.244353 ACTGGACACAAACATGAGAGAGG 60.244 47.826 0.00 0.00 0.00 3.69
278 279 4.000331 ACTGGACACAAACATGAGAGAG 58.000 45.455 0.00 0.00 0.00 3.20
279 280 4.422073 AACTGGACACAAACATGAGAGA 57.578 40.909 0.00 0.00 0.00 3.10
280 281 4.790766 GCAAACTGGACACAAACATGAGAG 60.791 45.833 0.00 0.00 0.00 3.20
281 282 3.066621 GCAAACTGGACACAAACATGAGA 59.933 43.478 0.00 0.00 0.00 3.27
282 283 3.374745 GCAAACTGGACACAAACATGAG 58.625 45.455 0.00 0.00 0.00 2.90
283 284 2.223456 CGCAAACTGGACACAAACATGA 60.223 45.455 0.00 0.00 0.00 3.07
284 285 2.118683 CGCAAACTGGACACAAACATG 58.881 47.619 0.00 0.00 0.00 3.21
285 286 1.066908 CCGCAAACTGGACACAAACAT 59.933 47.619 0.00 0.00 0.00 2.71
286 287 0.453793 CCGCAAACTGGACACAAACA 59.546 50.000 0.00 0.00 0.00 2.83
287 288 0.248866 CCCGCAAACTGGACACAAAC 60.249 55.000 0.00 0.00 0.00 2.93
288 289 0.394488 TCCCGCAAACTGGACACAAA 60.394 50.000 0.00 0.00 0.00 2.83
289 290 0.817634 CTCCCGCAAACTGGACACAA 60.818 55.000 0.00 0.00 0.00 3.33
290 291 1.227823 CTCCCGCAAACTGGACACA 60.228 57.895 0.00 0.00 0.00 3.72
291 292 0.534203 TTCTCCCGCAAACTGGACAC 60.534 55.000 0.00 0.00 0.00 3.67
292 293 0.181587 TTTCTCCCGCAAACTGGACA 59.818 50.000 0.00 0.00 0.00 4.02
293 294 1.468914 GATTTCTCCCGCAAACTGGAC 59.531 52.381 0.00 0.00 0.00 4.02
294 295 1.821216 GATTTCTCCCGCAAACTGGA 58.179 50.000 0.00 0.00 0.00 3.86
295 296 0.447801 CGATTTCTCCCGCAAACTGG 59.552 55.000 0.00 0.00 0.00 4.00
296 297 3.975992 CGATTTCTCCCGCAAACTG 57.024 52.632 0.00 0.00 0.00 3.16
303 304 2.954868 CGGACGCGATTTCTCCCG 60.955 66.667 15.93 9.68 0.00 5.14
304 305 2.585247 CCGGACGCGATTTCTCCC 60.585 66.667 15.93 0.78 0.00 4.30
305 306 1.877165 GTCCGGACGCGATTTCTCC 60.877 63.158 20.85 8.07 0.00 3.71
306 307 1.877165 GGTCCGGACGCGATTTCTC 60.877 63.158 27.68 7.22 0.00 2.87
307 308 2.183555 GGTCCGGACGCGATTTCT 59.816 61.111 27.68 0.00 0.00 2.52
308 309 1.877165 GAGGTCCGGACGCGATTTC 60.877 63.158 27.68 12.32 0.00 2.17
309 310 2.183555 GAGGTCCGGACGCGATTT 59.816 61.111 27.68 9.06 0.00 2.17
310 311 3.834799 GGAGGTCCGGACGCGATT 61.835 66.667 27.68 10.85 0.00 3.34
314 315 3.525545 GTAGGGAGGTCCGGACGC 61.526 72.222 27.68 21.09 41.52 5.19
315 316 3.207669 CGTAGGGAGGTCCGGACG 61.208 72.222 27.68 11.10 41.10 4.79
328 329 2.144730 CAGTCCTCTATCGGTCCGTAG 58.855 57.143 11.88 12.06 0.00 3.51
329 330 1.487976 ACAGTCCTCTATCGGTCCGTA 59.512 52.381 11.88 2.43 0.00 4.02
330 331 0.255318 ACAGTCCTCTATCGGTCCGT 59.745 55.000 11.88 1.23 0.00 4.69
331 332 0.663688 CACAGTCCTCTATCGGTCCG 59.336 60.000 4.39 4.39 0.00 4.79
332 333 1.765230 ACACAGTCCTCTATCGGTCC 58.235 55.000 0.00 0.00 0.00 4.46
333 334 2.159226 CCAACACAGTCCTCTATCGGTC 60.159 54.545 0.00 0.00 0.00 4.79
334 335 1.825474 CCAACACAGTCCTCTATCGGT 59.175 52.381 0.00 0.00 0.00 4.69
335 336 2.100197 TCCAACACAGTCCTCTATCGG 58.900 52.381 0.00 0.00 0.00 4.18
336 337 3.381590 TCATCCAACACAGTCCTCTATCG 59.618 47.826 0.00 0.00 0.00 2.92
337 338 4.404073 AGTCATCCAACACAGTCCTCTATC 59.596 45.833 0.00 0.00 0.00 2.08
338 339 4.357325 AGTCATCCAACACAGTCCTCTAT 58.643 43.478 0.00 0.00 0.00 1.98
339 340 3.779444 AGTCATCCAACACAGTCCTCTA 58.221 45.455 0.00 0.00 0.00 2.43
340 341 2.614259 AGTCATCCAACACAGTCCTCT 58.386 47.619 0.00 0.00 0.00 3.69
341 342 3.330267 GAAGTCATCCAACACAGTCCTC 58.670 50.000 0.00 0.00 0.00 3.71
342 343 2.289072 CGAAGTCATCCAACACAGTCCT 60.289 50.000 0.00 0.00 0.00 3.85
343 344 2.069273 CGAAGTCATCCAACACAGTCC 58.931 52.381 0.00 0.00 0.00 3.85
344 345 2.069273 CCGAAGTCATCCAACACAGTC 58.931 52.381 0.00 0.00 0.00 3.51
345 346 1.878102 GCCGAAGTCATCCAACACAGT 60.878 52.381 0.00 0.00 0.00 3.55
346 347 0.798776 GCCGAAGTCATCCAACACAG 59.201 55.000 0.00 0.00 0.00 3.66
347 348 0.948623 CGCCGAAGTCATCCAACACA 60.949 55.000 0.00 0.00 0.00 3.72
348 349 1.635663 CCGCCGAAGTCATCCAACAC 61.636 60.000 0.00 0.00 0.00 3.32
349 350 1.375396 CCGCCGAAGTCATCCAACA 60.375 57.895 0.00 0.00 0.00 3.33
350 351 0.953960 AACCGCCGAAGTCATCCAAC 60.954 55.000 0.00 0.00 0.00 3.77
351 352 0.672401 GAACCGCCGAAGTCATCCAA 60.672 55.000 0.00 0.00 0.00 3.53
352 353 1.079405 GAACCGCCGAAGTCATCCA 60.079 57.895 0.00 0.00 0.00 3.41
353 354 2.165301 CGAACCGCCGAAGTCATCC 61.165 63.158 0.00 0.00 0.00 3.51
354 355 2.165301 CCGAACCGCCGAAGTCATC 61.165 63.158 0.00 0.00 0.00 2.92
355 356 2.125673 CCGAACCGCCGAAGTCAT 60.126 61.111 0.00 0.00 0.00 3.06
356 357 3.296836 TCCGAACCGCCGAAGTCA 61.297 61.111 0.00 0.00 0.00 3.41
357 358 2.808321 GTCCGAACCGCCGAAGTC 60.808 66.667 0.00 0.00 0.00 3.01
358 359 4.712425 CGTCCGAACCGCCGAAGT 62.712 66.667 0.00 0.00 0.00 3.01
366 367 3.110178 CTCGCAACCGTCCGAACC 61.110 66.667 0.00 0.00 35.54 3.62
367 368 2.049802 TCTCGCAACCGTCCGAAC 60.050 61.111 0.00 0.00 35.54 3.95
368 369 2.257371 CTCTCGCAACCGTCCGAA 59.743 61.111 0.00 0.00 35.54 4.30
369 370 3.744719 CCTCTCGCAACCGTCCGA 61.745 66.667 0.00 0.00 35.54 4.55
370 371 3.569049 AACCTCTCGCAACCGTCCG 62.569 63.158 0.00 0.00 35.54 4.79
371 372 1.301479 AAACCTCTCGCAACCGTCC 60.301 57.895 0.00 0.00 35.54 4.79
372 373 0.599204 TCAAACCTCTCGCAACCGTC 60.599 55.000 0.00 0.00 35.54 4.79
373 374 0.034896 ATCAAACCTCTCGCAACCGT 59.965 50.000 0.00 0.00 35.54 4.83
374 375 0.443869 CATCAAACCTCTCGCAACCG 59.556 55.000 0.00 0.00 0.00 4.44
375 376 0.804989 CCATCAAACCTCTCGCAACC 59.195 55.000 0.00 0.00 0.00 3.77
376 377 1.523758 ACCATCAAACCTCTCGCAAC 58.476 50.000 0.00 0.00 0.00 4.17
377 378 1.879380 CAACCATCAAACCTCTCGCAA 59.121 47.619 0.00 0.00 0.00 4.85
378 379 1.522668 CAACCATCAAACCTCTCGCA 58.477 50.000 0.00 0.00 0.00 5.10
379 380 0.804989 CCAACCATCAAACCTCTCGC 59.195 55.000 0.00 0.00 0.00 5.03
380 381 1.453155 CCCAACCATCAAACCTCTCG 58.547 55.000 0.00 0.00 0.00 4.04
381 382 1.075536 ACCCCAACCATCAAACCTCTC 59.924 52.381 0.00 0.00 0.00 3.20
382 383 1.158007 ACCCCAACCATCAAACCTCT 58.842 50.000 0.00 0.00 0.00 3.69
383 384 1.618343 CAACCCCAACCATCAAACCTC 59.382 52.381 0.00 0.00 0.00 3.85
384 385 1.715785 CAACCCCAACCATCAAACCT 58.284 50.000 0.00 0.00 0.00 3.50
385 386 0.684535 CCAACCCCAACCATCAAACC 59.315 55.000 0.00 0.00 0.00 3.27
386 387 1.618343 CTCCAACCCCAACCATCAAAC 59.382 52.381 0.00 0.00 0.00 2.93
387 388 1.501170 TCTCCAACCCCAACCATCAAA 59.499 47.619 0.00 0.00 0.00 2.69
388 389 1.153539 TCTCCAACCCCAACCATCAA 58.846 50.000 0.00 0.00 0.00 2.57
389 390 1.005805 CATCTCCAACCCCAACCATCA 59.994 52.381 0.00 0.00 0.00 3.07
390 391 1.767759 CATCTCCAACCCCAACCATC 58.232 55.000 0.00 0.00 0.00 3.51
391 392 0.324645 GCATCTCCAACCCCAACCAT 60.325 55.000 0.00 0.00 0.00 3.55
392 393 1.076549 GCATCTCCAACCCCAACCA 59.923 57.895 0.00 0.00 0.00 3.67
393 394 1.682344 GGCATCTCCAACCCCAACC 60.682 63.158 0.00 0.00 34.01 3.77
394 395 1.682344 GGGCATCTCCAACCCCAAC 60.682 63.158 0.00 0.00 37.70 3.77
395 396 1.442886 AAGGGCATCTCCAACCCCAA 61.443 55.000 0.00 0.00 45.48 4.12
396 397 0.551377 TAAGGGCATCTCCAACCCCA 60.551 55.000 0.00 0.00 45.48 4.96
397 398 0.106669 GTAAGGGCATCTCCAACCCC 60.107 60.000 0.00 0.00 45.48 4.95
398 399 0.106669 GGTAAGGGCATCTCCAACCC 60.107 60.000 0.00 0.00 44.62 4.11
399 400 0.623723 TGGTAAGGGCATCTCCAACC 59.376 55.000 0.00 0.00 36.33 3.77
400 401 2.301346 CATGGTAAGGGCATCTCCAAC 58.699 52.381 0.00 0.00 36.21 3.77
401 402 1.410083 GCATGGTAAGGGCATCTCCAA 60.410 52.381 0.00 0.00 36.21 3.53
402 403 0.183492 GCATGGTAAGGGCATCTCCA 59.817 55.000 0.00 0.00 36.21 3.86
403 404 0.183492 TGCATGGTAAGGGCATCTCC 59.817 55.000 0.00 0.00 31.58 3.71
404 405 1.952296 CTTGCATGGTAAGGGCATCTC 59.048 52.381 0.00 0.00 37.39 2.75
405 406 1.285962 ACTTGCATGGTAAGGGCATCT 59.714 47.619 4.44 0.00 37.39 2.90
406 407 1.678101 GACTTGCATGGTAAGGGCATC 59.322 52.381 4.44 0.00 37.39 3.91
407 408 1.005805 TGACTTGCATGGTAAGGGCAT 59.994 47.619 4.44 0.00 37.39 4.40
408 409 0.403655 TGACTTGCATGGTAAGGGCA 59.596 50.000 4.44 0.00 35.41 5.36
409 410 1.544724 TTGACTTGCATGGTAAGGGC 58.455 50.000 4.44 0.00 0.00 5.19
410 411 5.913137 TTATTTGACTTGCATGGTAAGGG 57.087 39.130 4.44 0.00 0.00 3.95
411 412 7.378181 AGTTTTATTTGACTTGCATGGTAAGG 58.622 34.615 4.44 0.00 0.00 2.69
454 455 1.271856 TGGGTCTCGGCACAAATCTA 58.728 50.000 0.00 0.00 0.00 1.98
462 463 5.931294 TGTTATATTTTATGGGTCTCGGCA 58.069 37.500 0.00 0.00 0.00 5.69
511 513 5.295431 TCAACTATGAACAGGCAATTTCG 57.705 39.130 0.00 0.00 30.99 3.46
553 555 5.046376 GGAAACAAGATTGATGGGTGGAAAT 60.046 40.000 0.00 0.00 0.00 2.17
557 559 2.164219 CGGAAACAAGATTGATGGGTGG 59.836 50.000 0.00 0.00 0.00 4.61
571 573 3.444388 AGCAACTGGTTTAAACGGAAACA 59.556 39.130 12.07 3.52 40.43 2.83
576 578 3.915437 ATGAGCAACTGGTTTAAACGG 57.085 42.857 12.07 9.74 0.00 4.44
577 579 4.606961 ACAATGAGCAACTGGTTTAAACG 58.393 39.130 12.07 2.23 0.00 3.60
591 593 3.551082 CAGAATCGAGACTGACAATGAGC 59.449 47.826 13.97 0.00 36.38 4.26
600 602 1.485397 CATCCGCAGAATCGAGACTG 58.515 55.000 14.60 14.60 37.22 3.51
663 697 3.341823 AGATGCATTGACCTTCTGACAC 58.658 45.455 0.00 0.00 0.00 3.67
699 733 1.244019 ACCGAGTGAAAAGCCCATGC 61.244 55.000 0.00 0.00 37.95 4.06
782 851 0.738762 CTGCCACAGTGTCGGATCTG 60.739 60.000 13.85 0.00 37.65 2.90
822 891 3.196463 CGATGAGGAGTGTACTACGAGT 58.804 50.000 0.00 0.00 0.00 4.18
825 894 2.934553 TGACGATGAGGAGTGTACTACG 59.065 50.000 0.00 0.00 0.00 3.51
826 895 4.660105 GTTGACGATGAGGAGTGTACTAC 58.340 47.826 0.00 0.00 0.00 2.73
846 915 3.067601 GGAATTAATGGCGATTTCCCGTT 59.932 43.478 0.00 0.00 35.78 4.44
933 1003 1.148310 CTTGCGAGTGTCATTCCGTT 58.852 50.000 0.00 0.00 0.00 4.44
974 1046 3.056328 GCCGGAGAGGTTTGGTGC 61.056 66.667 5.05 0.00 43.70 5.01
1170 1284 3.681835 GTGGACCAGACGAGCGGT 61.682 66.667 0.00 0.00 38.56 5.68
1458 1575 0.667792 GCGACTCGAGGAGTTTGCTT 60.668 55.000 18.41 0.00 43.53 3.91
1550 1667 1.771255 ACTTGTTGGAGACCTTCTGCT 59.229 47.619 0.00 0.00 35.71 4.24
2139 2280 1.617947 GGAACCCTCCGATGAGCACT 61.618 60.000 0.00 0.00 37.29 4.40
2316 2466 6.126652 ACAAGCATCCAGTAATGAATAGGAGT 60.127 38.462 0.00 0.00 0.00 3.85
2317 2467 6.294473 ACAAGCATCCAGTAATGAATAGGAG 58.706 40.000 0.00 0.00 0.00 3.69
2318 2468 6.252599 ACAAGCATCCAGTAATGAATAGGA 57.747 37.500 0.00 0.00 0.00 2.94
2321 2471 9.625747 TCAATAACAAGCATCCAGTAATGAATA 57.374 29.630 0.00 0.00 0.00 1.75
2364 2517 0.304705 GTGACAAATATCGCAGGCCG 59.695 55.000 0.00 0.00 38.61 6.13
2374 2527 1.149987 GTGGAACCGCGTGACAAATA 58.850 50.000 4.92 0.00 0.00 1.40
2558 2722 6.971527 TGTGACGTTTGACTTAAGAGAAAA 57.028 33.333 10.09 3.91 0.00 2.29
2668 2862 1.821332 CTGAGAAATCCTGCGGGGC 60.821 63.158 12.87 0.00 34.39 5.80
2672 2866 4.691860 AAATTGTCTGAGAAATCCTGCG 57.308 40.909 0.00 0.00 0.00 5.18
2684 2878 4.935352 TGGGGAACAGAAAAATTGTCTG 57.065 40.909 11.42 11.42 46.59 3.51
2710 2911 6.267471 AGAAGGAAATAACATTGCTTGGTCAA 59.733 34.615 0.00 0.00 40.48 3.18
2711 2912 5.774690 AGAAGGAAATAACATTGCTTGGTCA 59.225 36.000 0.00 0.00 40.48 4.02
2713 2914 6.012745 AGAGAAGGAAATAACATTGCTTGGT 58.987 36.000 0.00 0.00 40.48 3.67
2717 2918 6.956497 AGAGAGAGAAGGAAATAACATTGCT 58.044 36.000 0.00 0.00 31.74 3.91
2720 2921 8.608185 AGAGAGAGAGAGAAGGAAATAACATT 57.392 34.615 0.00 0.00 0.00 2.71
2727 2928 5.488919 AGAGAGAGAGAGAGAGAGAAGGAAA 59.511 44.000 0.00 0.00 0.00 3.13
2728 2929 5.032846 AGAGAGAGAGAGAGAGAGAAGGAA 58.967 45.833 0.00 0.00 0.00 3.36
2729 2930 4.624913 AGAGAGAGAGAGAGAGAGAAGGA 58.375 47.826 0.00 0.00 0.00 3.36
2730 2931 4.653341 AGAGAGAGAGAGAGAGAGAGAAGG 59.347 50.000 0.00 0.00 0.00 3.46
2731 2932 5.598005 AGAGAGAGAGAGAGAGAGAGAGAAG 59.402 48.000 0.00 0.00 0.00 2.85
2732 2933 5.523588 AGAGAGAGAGAGAGAGAGAGAGAA 58.476 45.833 0.00 0.00 0.00 2.87
2733 2934 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
2734 2935 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
2735 2936 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
2736 2937 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
2737 2938 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
2738 2939 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
2739 2940 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
2740 2941 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
2817 3020 9.295825 TGTTACTGATATTGAATCCTGTTTTGT 57.704 29.630 0.00 0.00 0.00 2.83
2821 3024 6.828785 GGGTGTTACTGATATTGAATCCTGTT 59.171 38.462 0.00 0.00 0.00 3.16
2822 3025 6.357367 GGGTGTTACTGATATTGAATCCTGT 58.643 40.000 0.00 0.00 0.00 4.00
2845 3048 7.475137 TTAGATTTCAACTGTTAAATGGGGG 57.525 36.000 10.54 0.00 0.00 5.40
2846 3049 7.035612 GCTTAGATTTCAACTGTTAAATGGGG 58.964 38.462 10.54 0.00 0.00 4.96
2847 3050 7.830739 AGCTTAGATTTCAACTGTTAAATGGG 58.169 34.615 10.54 0.00 0.00 4.00
2854 3057 9.066892 TGTCAAATAGCTTAGATTTCAACTGTT 57.933 29.630 0.00 0.00 0.00 3.16
2855 3058 8.507249 GTGTCAAATAGCTTAGATTTCAACTGT 58.493 33.333 0.00 0.00 0.00 3.55
2856 3059 8.725148 AGTGTCAAATAGCTTAGATTTCAACTG 58.275 33.333 0.00 0.00 0.00 3.16
2857 3060 8.725148 CAGTGTCAAATAGCTTAGATTTCAACT 58.275 33.333 0.00 0.00 0.00 3.16
2858 3061 7.483059 GCAGTGTCAAATAGCTTAGATTTCAAC 59.517 37.037 0.00 0.00 0.00 3.18
2859 3062 7.362056 GGCAGTGTCAAATAGCTTAGATTTCAA 60.362 37.037 0.00 0.00 0.00 2.69
2860 3063 6.094048 GGCAGTGTCAAATAGCTTAGATTTCA 59.906 38.462 0.00 0.00 0.00 2.69
2861 3064 6.317391 AGGCAGTGTCAAATAGCTTAGATTTC 59.683 38.462 0.00 0.00 0.00 2.17
2862 3065 6.183347 AGGCAGTGTCAAATAGCTTAGATTT 58.817 36.000 0.00 0.00 0.00 2.17
2863 3066 5.749462 AGGCAGTGTCAAATAGCTTAGATT 58.251 37.500 0.00 0.00 0.00 2.40
2864 3067 5.365021 AGGCAGTGTCAAATAGCTTAGAT 57.635 39.130 0.00 0.00 0.00 1.98
2865 3068 4.826274 AGGCAGTGTCAAATAGCTTAGA 57.174 40.909 0.00 0.00 0.00 2.10
2866 3069 6.109359 AGTAAGGCAGTGTCAAATAGCTTAG 58.891 40.000 0.00 0.00 0.00 2.18
2867 3070 6.049955 AGTAAGGCAGTGTCAAATAGCTTA 57.950 37.500 0.00 0.00 0.00 3.09
2868 3071 4.911390 AGTAAGGCAGTGTCAAATAGCTT 58.089 39.130 0.00 0.00 0.00 3.74
2869 3072 4.559862 AGTAAGGCAGTGTCAAATAGCT 57.440 40.909 0.00 0.00 0.00 3.32
2870 3073 6.316390 ACAATAGTAAGGCAGTGTCAAATAGC 59.684 38.462 0.00 0.00 0.00 2.97
2871 3074 7.849804 ACAATAGTAAGGCAGTGTCAAATAG 57.150 36.000 0.00 0.00 0.00 1.73
2872 3075 9.899661 AATACAATAGTAAGGCAGTGTCAAATA 57.100 29.630 0.00 0.00 33.13 1.40
2873 3076 8.807948 AATACAATAGTAAGGCAGTGTCAAAT 57.192 30.769 0.00 0.00 33.13 2.32
2874 3077 9.378551 CTAATACAATAGTAAGGCAGTGTCAAA 57.621 33.333 0.00 0.00 33.13 2.69
2875 3078 8.537016 ACTAATACAATAGTAAGGCAGTGTCAA 58.463 33.333 0.00 0.00 34.40 3.18
2876 3079 8.074613 ACTAATACAATAGTAAGGCAGTGTCA 57.925 34.615 0.00 0.00 34.40 3.58
2910 3113 9.462606 CCCTACTAAACAAATAGGAAAAGATGT 57.537 33.333 0.00 0.00 38.20 3.06
2911 3114 8.903820 CCCCTACTAAACAAATAGGAAAAGATG 58.096 37.037 0.00 0.00 38.20 2.90
2912 3115 8.621073 ACCCCTACTAAACAAATAGGAAAAGAT 58.379 33.333 0.00 0.00 38.20 2.40
2913 3116 7.992295 ACCCCTACTAAACAAATAGGAAAAGA 58.008 34.615 0.00 0.00 38.20 2.52
2914 3117 8.645814 AACCCCTACTAAACAAATAGGAAAAG 57.354 34.615 0.00 0.00 38.20 2.27
2915 3118 7.670979 GGAACCCCTACTAAACAAATAGGAAAA 59.329 37.037 0.00 0.00 38.20 2.29
2916 3119 7.177184 GGAACCCCTACTAAACAAATAGGAAA 58.823 38.462 0.00 0.00 38.20 3.13
2917 3120 6.724351 GGAACCCCTACTAAACAAATAGGAA 58.276 40.000 0.00 0.00 38.20 3.36
2918 3121 6.317663 GGAACCCCTACTAAACAAATAGGA 57.682 41.667 0.00 0.00 38.20 2.94
2935 3138 5.773852 AACAAATGTTGCACTAGGGAACCC 61.774 45.833 0.00 0.94 46.25 4.11
2936 3139 3.320826 AACAAATGTTGCACTAGGGAACC 59.679 43.478 0.00 0.00 46.25 3.62
2937 3140 4.584327 AACAAATGTTGCACTAGGGAAC 57.416 40.909 0.00 2.32 46.91 3.62
2950 3153 5.291614 GCATGTGAAGTGAAACAACAAATGT 59.708 36.000 0.00 0.00 46.82 2.71
2951 3154 5.276963 GGCATGTGAAGTGAAACAACAAATG 60.277 40.000 0.00 0.00 40.34 2.32
2952 3155 4.810491 GGCATGTGAAGTGAAACAACAAAT 59.190 37.500 0.00 0.00 41.43 2.32
2953 3156 4.081752 AGGCATGTGAAGTGAAACAACAAA 60.082 37.500 0.00 0.00 41.43 2.83
2954 3157 3.446873 AGGCATGTGAAGTGAAACAACAA 59.553 39.130 0.00 0.00 41.43 2.83
2955 3158 3.023119 AGGCATGTGAAGTGAAACAACA 58.977 40.909 0.00 0.00 41.43 3.33
2956 3159 3.632189 GAGGCATGTGAAGTGAAACAAC 58.368 45.455 0.00 0.00 41.43 3.32
2957 3160 2.290367 CGAGGCATGTGAAGTGAAACAA 59.710 45.455 0.00 0.00 41.43 2.83
2958 3161 1.872952 CGAGGCATGTGAAGTGAAACA 59.127 47.619 0.00 0.00 41.43 2.83
2959 3162 1.197721 CCGAGGCATGTGAAGTGAAAC 59.802 52.381 0.00 0.00 0.00 2.78
2960 3163 1.522668 CCGAGGCATGTGAAGTGAAA 58.477 50.000 0.00 0.00 0.00 2.69
2961 3164 0.321564 CCCGAGGCATGTGAAGTGAA 60.322 55.000 0.00 0.00 0.00 3.18
2962 3165 1.191489 TCCCGAGGCATGTGAAGTGA 61.191 55.000 0.00 0.00 0.00 3.41
2963 3166 0.321564 TTCCCGAGGCATGTGAAGTG 60.322 55.000 0.00 0.00 0.00 3.16
2964 3167 0.620556 ATTCCCGAGGCATGTGAAGT 59.379 50.000 0.00 0.00 0.00 3.01
2965 3168 1.019673 CATTCCCGAGGCATGTGAAG 58.980 55.000 0.00 0.00 0.00 3.02
2966 3169 0.327924 ACATTCCCGAGGCATGTGAA 59.672 50.000 7.25 0.00 29.74 3.18
2967 3170 0.327924 AACATTCCCGAGGCATGTGA 59.672 50.000 8.47 0.00 31.37 3.58
2968 3171 0.734889 GAACATTCCCGAGGCATGTG 59.265 55.000 8.47 0.00 31.37 3.21
2969 3172 0.620556 AGAACATTCCCGAGGCATGT 59.379 50.000 3.15 3.15 32.31 3.21
2970 3173 2.620251 TAGAACATTCCCGAGGCATG 57.380 50.000 2.06 2.06 0.00 4.06
2971 3174 3.136443 TCATTAGAACATTCCCGAGGCAT 59.864 43.478 0.00 0.00 0.00 4.40
2972 3175 2.503765 TCATTAGAACATTCCCGAGGCA 59.496 45.455 0.00 0.00 0.00 4.75
2973 3176 2.872858 GTCATTAGAACATTCCCGAGGC 59.127 50.000 0.00 0.00 0.00 4.70
2974 3177 4.137116 TGTCATTAGAACATTCCCGAGG 57.863 45.455 0.00 0.00 0.00 4.63
2975 3178 5.817296 TCATTGTCATTAGAACATTCCCGAG 59.183 40.000 0.00 0.00 0.00 4.63
2976 3179 5.739959 TCATTGTCATTAGAACATTCCCGA 58.260 37.500 0.00 0.00 0.00 5.14
2977 3180 5.008019 CCTCATTGTCATTAGAACATTCCCG 59.992 44.000 0.00 0.00 0.00 5.14
2978 3181 6.122277 TCCTCATTGTCATTAGAACATTCCC 58.878 40.000 0.00 0.00 0.00 3.97
2979 3182 7.500227 TCATCCTCATTGTCATTAGAACATTCC 59.500 37.037 0.00 0.00 0.00 3.01
2980 3183 8.341173 GTCATCCTCATTGTCATTAGAACATTC 58.659 37.037 0.00 0.00 0.00 2.67
2981 3184 7.011763 CGTCATCCTCATTGTCATTAGAACATT 59.988 37.037 0.00 0.00 0.00 2.71
2982 3185 6.481313 CGTCATCCTCATTGTCATTAGAACAT 59.519 38.462 0.00 0.00 0.00 2.71
2983 3186 5.812127 CGTCATCCTCATTGTCATTAGAACA 59.188 40.000 0.00 0.00 0.00 3.18
2984 3187 5.812642 ACGTCATCCTCATTGTCATTAGAAC 59.187 40.000 0.00 0.00 0.00 3.01
2985 3188 5.977635 ACGTCATCCTCATTGTCATTAGAA 58.022 37.500 0.00 0.00 0.00 2.10
2986 3189 5.598416 ACGTCATCCTCATTGTCATTAGA 57.402 39.130 0.00 0.00 0.00 2.10
2987 3190 5.007039 CCAACGTCATCCTCATTGTCATTAG 59.993 44.000 0.00 0.00 0.00 1.73
2988 3191 4.875536 CCAACGTCATCCTCATTGTCATTA 59.124 41.667 0.00 0.00 0.00 1.90
2989 3192 3.691118 CCAACGTCATCCTCATTGTCATT 59.309 43.478 0.00 0.00 0.00 2.57
2990 3193 3.273434 CCAACGTCATCCTCATTGTCAT 58.727 45.455 0.00 0.00 0.00 3.06
2991 3194 2.038426 ACCAACGTCATCCTCATTGTCA 59.962 45.455 0.00 0.00 0.00 3.58
2992 3195 2.416547 CACCAACGTCATCCTCATTGTC 59.583 50.000 0.00 0.00 0.00 3.18
2993 3196 2.038426 TCACCAACGTCATCCTCATTGT 59.962 45.455 0.00 0.00 0.00 2.71
2994 3197 2.698803 TCACCAACGTCATCCTCATTG 58.301 47.619 0.00 0.00 0.00 2.82
2995 3198 3.273434 CATCACCAACGTCATCCTCATT 58.727 45.455 0.00 0.00 0.00 2.57
2996 3199 2.420547 CCATCACCAACGTCATCCTCAT 60.421 50.000 0.00 0.00 0.00 2.90
2997 3200 1.066215 CCATCACCAACGTCATCCTCA 60.066 52.381 0.00 0.00 0.00 3.86
2998 3201 1.656652 CCATCACCAACGTCATCCTC 58.343 55.000 0.00 0.00 0.00 3.71
2999 3202 0.253044 CCCATCACCAACGTCATCCT 59.747 55.000 0.00 0.00 0.00 3.24
3000 3203 0.251916 TCCCATCACCAACGTCATCC 59.748 55.000 0.00 0.00 0.00 3.51
3001 3204 2.332063 ATCCCATCACCAACGTCATC 57.668 50.000 0.00 0.00 0.00 2.92
3002 3205 2.503765 TGTATCCCATCACCAACGTCAT 59.496 45.455 0.00 0.00 0.00 3.06
3003 3206 1.903183 TGTATCCCATCACCAACGTCA 59.097 47.619 0.00 0.00 0.00 4.35
3004 3207 2.684001 TGTATCCCATCACCAACGTC 57.316 50.000 0.00 0.00 0.00 4.34
3005 3208 2.503765 TCATGTATCCCATCACCAACGT 59.496 45.455 0.00 0.00 0.00 3.99
3006 3209 3.133691 CTCATGTATCCCATCACCAACG 58.866 50.000 0.00 0.00 0.00 4.10
3007 3210 3.480470 CCTCATGTATCCCATCACCAAC 58.520 50.000 0.00 0.00 0.00 3.77
3008 3211 2.158623 GCCTCATGTATCCCATCACCAA 60.159 50.000 0.00 0.00 0.00 3.67
3009 3212 1.421268 GCCTCATGTATCCCATCACCA 59.579 52.381 0.00 0.00 0.00 4.17
3010 3213 1.421268 TGCCTCATGTATCCCATCACC 59.579 52.381 0.00 0.00 0.00 4.02
3011 3214 2.105477 AGTGCCTCATGTATCCCATCAC 59.895 50.000 0.00 0.00 0.00 3.06
3012 3215 2.411583 AGTGCCTCATGTATCCCATCA 58.588 47.619 0.00 0.00 0.00 3.07
3013 3216 3.834813 TCTAGTGCCTCATGTATCCCATC 59.165 47.826 0.00 0.00 0.00 3.51
3014 3217 3.861846 TCTAGTGCCTCATGTATCCCAT 58.138 45.455 0.00 0.00 0.00 4.00
3015 3218 3.328535 TCTAGTGCCTCATGTATCCCA 57.671 47.619 0.00 0.00 0.00 4.37
3016 3219 3.898123 TCTTCTAGTGCCTCATGTATCCC 59.102 47.826 0.00 0.00 0.00 3.85
3017 3220 4.830046 TCTCTTCTAGTGCCTCATGTATCC 59.170 45.833 0.00 0.00 0.00 2.59
3018 3221 6.389091 CATCTCTTCTAGTGCCTCATGTATC 58.611 44.000 0.00 0.00 0.00 2.24
3019 3222 5.279406 GCATCTCTTCTAGTGCCTCATGTAT 60.279 44.000 0.00 0.00 0.00 2.29
3020 3223 4.038522 GCATCTCTTCTAGTGCCTCATGTA 59.961 45.833 0.00 0.00 0.00 2.29
3021 3224 3.181467 GCATCTCTTCTAGTGCCTCATGT 60.181 47.826 0.00 0.00 0.00 3.21
3022 3225 3.391965 GCATCTCTTCTAGTGCCTCATG 58.608 50.000 0.00 0.00 0.00 3.07
3026 3229 0.749649 CCGCATCTCTTCTAGTGCCT 59.250 55.000 0.00 0.00 32.10 4.75
3044 3247 0.755686 CATGCCCTACCTCTCTGACC 59.244 60.000 0.00 0.00 0.00 4.02
3045 3248 1.410882 GACATGCCCTACCTCTCTGAC 59.589 57.143 0.00 0.00 0.00 3.51
3073 3276 3.083997 GATGACCCGCCACCTCCT 61.084 66.667 0.00 0.00 0.00 3.69
3082 3285 2.953466 TTTTACCTCGAGATGACCCG 57.047 50.000 15.71 0.00 0.00 5.28
3095 3298 3.822167 TGAAAAGGTGGTCGGATTTTACC 59.178 43.478 0.00 0.00 36.24 2.85
3104 3307 4.814771 GGGAATACTATGAAAAGGTGGTCG 59.185 45.833 0.00 0.00 0.00 4.79
3105 3308 4.814771 CGGGAATACTATGAAAAGGTGGTC 59.185 45.833 0.00 0.00 0.00 4.02
3111 3314 6.338146 TCTCACACGGGAATACTATGAAAAG 58.662 40.000 0.00 0.00 0.00 2.27
3127 3330 2.184322 CCCGACCCATCTCACACG 59.816 66.667 0.00 0.00 0.00 4.49
3128 3331 1.961180 CTCCCCGACCCATCTCACAC 61.961 65.000 0.00 0.00 0.00 3.82
3156 3359 3.181503 GCATGCATAGCCTATACATGTGC 60.182 47.826 20.75 9.79 40.47 4.57
3213 3417 9.436957 CAGACTGGTAACTACAACATAAGAAAT 57.563 33.333 0.00 0.00 37.61 2.17
3218 3422 5.484715 GGCAGACTGGTAACTACAACATAA 58.515 41.667 4.26 0.00 37.61 1.90
3221 3425 2.038033 GGGCAGACTGGTAACTACAACA 59.962 50.000 4.26 0.00 37.61 3.33
3225 3429 2.906354 CATGGGCAGACTGGTAACTAC 58.094 52.381 4.26 0.00 37.61 2.73
3232 3436 1.001764 TTCAGCATGGGCAGACTGG 60.002 57.895 4.26 0.00 44.61 4.00
3247 3451 7.797038 CAACATGATCATCCTGATAACTTCA 57.203 36.000 4.86 0.00 37.20 3.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.