Multiple sequence alignment - TraesCS3B01G510900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G510900 chr3B 100.000 4367 0 0 1 4367 754966720 754971086 0.000000e+00 8065.0
1 TraesCS3B01G510900 chr3B 88.571 630 40 9 2922 3551 756195515 756194918 0.000000e+00 736.0
2 TraesCS3B01G510900 chr3B 97.257 401 10 1 1 400 588460560 588460160 0.000000e+00 678.0
3 TraesCS3B01G510900 chr3B 94.131 426 25 0 978 1403 756196712 756196287 0.000000e+00 649.0
4 TraesCS3B01G510900 chr3B 94.221 398 19 2 1 397 523566341 523565947 4.830000e-169 604.0
5 TraesCS3B01G510900 chr3B 86.747 332 7 11 552 847 588459863 588459533 7.000000e-88 335.0
6 TraesCS3B01G510900 chr3B 81.707 164 15 12 687 845 159773394 159773547 5.930000e-24 122.0
7 TraesCS3B01G510900 chr3B 92.405 79 1 1 3545 3618 539670599 539670677 1.660000e-19 108.0
8 TraesCS3B01G510900 chr3B 89.024 82 4 5 1327 1403 756196306 756196225 3.590000e-16 97.1
9 TraesCS3B01G510900 chr3B 97.222 36 1 0 3954 3989 752111179 752111144 1.310000e-05 62.1
10 TraesCS3B01G510900 chr5A 98.760 1210 15 0 1408 2617 473242039 473240830 0.000000e+00 2152.0
11 TraesCS3B01G510900 chr5A 98.512 1210 18 0 1408 2617 566166449 566165240 0.000000e+00 2135.0
12 TraesCS3B01G510900 chr5B 98.434 1213 19 0 1408 2620 598578003 598576791 0.000000e+00 2135.0
13 TraesCS3B01G510900 chr5B 96.488 484 13 4 1 480 486986635 486987118 0.000000e+00 797.0
14 TraesCS3B01G510900 chr5B 95.174 373 12 2 473 845 486987583 486987949 6.290000e-163 584.0
15 TraesCS3B01G510900 chr5B 90.769 65 4 2 3555 3618 348472002 348471939 7.780000e-13 86.1
16 TraesCS3B01G510900 chr6A 98.266 1211 20 1 1408 2618 357514565 357513356 0.000000e+00 2119.0
17 TraesCS3B01G510900 chr6A 81.749 263 18 12 2702 2964 192715786 192716018 4.460000e-45 193.0
18 TraesCS3B01G510900 chr1B 96.278 1209 40 3 1408 2615 289282386 289281182 0.000000e+00 1978.0
19 TraesCS3B01G510900 chr1B 94.979 1215 54 7 1408 2617 662596852 662595640 0.000000e+00 1899.0
20 TraesCS3B01G510900 chr1B 94.231 364 18 1 1 364 26819795 26820155 1.770000e-153 553.0
21 TraesCS3B01G510900 chr1B 81.560 141 17 9 709 845 26820550 26820685 1.660000e-19 108.0
22 TraesCS3B01G510900 chr1B 80.667 150 20 8 707 850 353335766 353335620 1.660000e-19 108.0
23 TraesCS3B01G510900 chr1B 87.013 77 5 5 3549 3623 562192146 562192219 1.010000e-11 82.4
24 TraesCS3B01G510900 chr2D 95.391 1215 50 6 1408 2617 43947462 43948675 0.000000e+00 1929.0
25 TraesCS3B01G510900 chr2D 94.893 1214 53 8 1408 2617 458266 457058 0.000000e+00 1890.0
26 TraesCS3B01G510900 chr7D 94.741 1217 57 6 1408 2618 102549763 102550978 0.000000e+00 1886.0
27 TraesCS3B01G510900 chr7D 92.583 391 24 3 1 389 7866520 7866907 1.370000e-154 556.0
28 TraesCS3B01G510900 chr7D 83.537 164 11 13 687 845 207291769 207291921 5.890000e-29 139.0
29 TraesCS3B01G510900 chr3A 91.371 788 60 6 2765 3551 700563646 700564426 0.000000e+00 1072.0
30 TraesCS3B01G510900 chr3A 91.381 789 59 6 2765 3551 701852049 701852830 0.000000e+00 1072.0
31 TraesCS3B01G510900 chr3A 93.145 496 11 2 3615 4088 701852826 701853320 0.000000e+00 706.0
32 TraesCS3B01G510900 chr3A 92.944 496 12 2 3615 4088 700564422 700564916 0.000000e+00 701.0
33 TraesCS3B01G510900 chr3A 88.246 570 48 12 846 1402 701850901 701851464 0.000000e+00 664.0
34 TraesCS3B01G510900 chr3A 94.335 406 23 0 997 1402 700562646 700563051 1.330000e-174 623.0
35 TraesCS3B01G510900 chr3A 96.831 284 6 1 4087 4367 700564975 700565258 5.110000e-129 472.0
36 TraesCS3B01G510900 chr3A 96.479 284 7 1 4087 4367 701853379 701853662 2.380000e-127 466.0
37 TraesCS3B01G510900 chr3D 89.609 818 77 7 2615 3430 567233081 567232270 0.000000e+00 1033.0
38 TraesCS3B01G510900 chr3D 86.167 694 73 12 2735 3427 569523626 569524297 0.000000e+00 728.0
39 TraesCS3B01G510900 chr3D 92.699 452 29 2 952 1402 567233838 567233390 0.000000e+00 649.0
40 TraesCS3B01G510900 chr3D 93.632 424 27 0 980 1403 569522744 569523167 6.160000e-178 634.0
41 TraesCS3B01G510900 chr3D 91.277 470 15 4 3652 4095 567227704 567227235 6.210000e-173 617.0
42 TraesCS3B01G510900 chr3D 80.984 752 101 17 2795 3545 569526787 569527497 3.810000e-155 558.0
43 TraesCS3B01G510900 chr3D 92.545 389 19 4 1 388 14420179 14419800 2.300000e-152 549.0
44 TraesCS3B01G510900 chr3D 96.479 284 7 1 4087 4367 567227185 567226902 2.380000e-127 466.0
45 TraesCS3B01G510900 chr3D 80.464 302 27 11 2663 2964 250515628 250515897 7.410000e-48 202.0
46 TraesCS3B01G510900 chr3D 82.209 163 12 5 2724 2886 567230663 567230518 1.650000e-24 124.0
47 TraesCS3B01G510900 chr3D 97.222 36 1 0 3954 3989 564320636 564320601 1.310000e-05 62.1
48 TraesCS3B01G510900 chr6B 95.666 646 19 6 1 641 621012134 621011493 0.000000e+00 1029.0
49 TraesCS3B01G510900 chr6B 88.421 190 7 4 659 848 620999143 620998969 9.510000e-52 215.0
50 TraesCS3B01G510900 chrUn 85.354 833 87 16 2724 3549 255058118 255057314 0.000000e+00 830.0
51 TraesCS3B01G510900 chrUn 85.354 833 87 16 2724 3549 269235124 269234320 0.000000e+00 830.0
52 TraesCS3B01G510900 chrUn 90.215 511 44 5 2922 3430 255060343 255059837 0.000000e+00 662.0
53 TraesCS3B01G510900 chrUn 90.215 511 44 5 2922 3430 269237349 269236843 0.000000e+00 662.0
54 TraesCS3B01G510900 chrUn 92.795 458 26 4 952 1406 255061555 255061102 0.000000e+00 656.0
55 TraesCS3B01G510900 chrUn 92.795 458 26 4 952 1406 269238561 269238108 0.000000e+00 656.0
56 TraesCS3B01G510900 chrUn 82.609 161 16 7 687 845 1829536 1829686 9.850000e-27 132.0
57 TraesCS3B01G510900 chrUn 79.803 203 18 11 2735 2937 255060606 255060427 4.580000e-25 126.0
58 TraesCS3B01G510900 chrUn 98.148 54 0 1 3572 3625 99244895 99244947 4.650000e-15 93.5
59 TraesCS3B01G510900 chr1A 93.781 402 21 2 1 401 561085387 561084989 6.250000e-168 601.0
60 TraesCS3B01G510900 chr1A 92.188 64 3 2 3572 3634 301777887 301777825 6.020000e-14 89.8
61 TraesCS3B01G510900 chr1A 90.000 70 3 4 3572 3638 188148843 188148911 2.160000e-13 87.9
62 TraesCS3B01G510900 chr4B 90.796 402 32 3 1 401 448529711 448530108 2.310000e-147 532.0
63 TraesCS3B01G510900 chr1D 81.848 303 24 10 2662 2964 166605027 166605298 4.390000e-55 226.0
64 TraesCS3B01G510900 chr2A 81.749 263 21 8 2702 2964 208167619 208167854 1.240000e-45 195.0
65 TraesCS3B01G510900 chr2A 92.105 76 1 3 3549 3619 763024273 763024198 7.730000e-18 102.0
66 TraesCS3B01G510900 chr7A 81.369 263 25 11 2702 2964 142484863 142484625 4.460000e-45 193.0
67 TraesCS3B01G510900 chr7A 79.286 280 29 19 581 846 154560074 154560338 7.510000e-38 169.0
68 TraesCS3B01G510900 chr5D 94.737 76 4 0 2702 2777 60728689 60728614 7.670000e-23 119.0
69 TraesCS3B01G510900 chr5D 100.000 32 0 0 3540 3571 459929287 459929318 4.720000e-05 60.2
70 TraesCS3B01G510900 chr2B 96.491 57 2 0 3572 3628 643184664 643184608 1.290000e-15 95.3
71 TraesCS3B01G510900 chr6D 89.744 78 1 3 3548 3621 47977948 47977874 4.650000e-15 93.5
72 TraesCS3B01G510900 chr4D 100.000 28 0 0 3544 3571 367720765 367720792 8.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G510900 chr3B 754966720 754971086 4366 False 8065.000000 8065 100.000000 1 4367 1 chr3B.!!$F3 4366
1 TraesCS3B01G510900 chr3B 588459533 588460560 1027 True 506.500000 678 92.002000 1 847 2 chr3B.!!$R3 846
2 TraesCS3B01G510900 chr3B 756194918 756196712 1794 True 494.033333 736 90.575333 978 3551 3 chr3B.!!$R4 2573
3 TraesCS3B01G510900 chr5A 473240830 473242039 1209 True 2152.000000 2152 98.760000 1408 2617 1 chr5A.!!$R1 1209
4 TraesCS3B01G510900 chr5A 566165240 566166449 1209 True 2135.000000 2135 98.512000 1408 2617 1 chr5A.!!$R2 1209
5 TraesCS3B01G510900 chr5B 598576791 598578003 1212 True 2135.000000 2135 98.434000 1408 2620 1 chr5B.!!$R2 1212
6 TraesCS3B01G510900 chr5B 486986635 486987949 1314 False 690.500000 797 95.831000 1 845 2 chr5B.!!$F1 844
7 TraesCS3B01G510900 chr6A 357513356 357514565 1209 True 2119.000000 2119 98.266000 1408 2618 1 chr6A.!!$R1 1210
8 TraesCS3B01G510900 chr1B 289281182 289282386 1204 True 1978.000000 1978 96.278000 1408 2615 1 chr1B.!!$R1 1207
9 TraesCS3B01G510900 chr1B 662595640 662596852 1212 True 1899.000000 1899 94.979000 1408 2617 1 chr1B.!!$R3 1209
10 TraesCS3B01G510900 chr1B 26819795 26820685 890 False 330.500000 553 87.895500 1 845 2 chr1B.!!$F2 844
11 TraesCS3B01G510900 chr2D 43947462 43948675 1213 False 1929.000000 1929 95.391000 1408 2617 1 chr2D.!!$F1 1209
12 TraesCS3B01G510900 chr2D 457058 458266 1208 True 1890.000000 1890 94.893000 1408 2617 1 chr2D.!!$R1 1209
13 TraesCS3B01G510900 chr7D 102549763 102550978 1215 False 1886.000000 1886 94.741000 1408 2618 1 chr7D.!!$F2 1210
14 TraesCS3B01G510900 chr3A 701850901 701853662 2761 False 727.000000 1072 92.312750 846 4367 4 chr3A.!!$F2 3521
15 TraesCS3B01G510900 chr3A 700562646 700565258 2612 False 717.000000 1072 93.870250 997 4367 4 chr3A.!!$F1 3370
16 TraesCS3B01G510900 chr3D 569522744 569527497 4753 False 640.000000 728 86.927667 980 3545 3 chr3D.!!$F2 2565
17 TraesCS3B01G510900 chr3D 567226902 567233838 6936 True 577.800000 1033 90.454600 952 4367 5 chr3D.!!$R3 3415
18 TraesCS3B01G510900 chr6B 621011493 621012134 641 True 1029.000000 1029 95.666000 1 641 1 chr6B.!!$R2 640
19 TraesCS3B01G510900 chrUn 269234320 269238561 4241 True 716.000000 830 89.454667 952 3549 3 chrUn.!!$R2 2597
20 TraesCS3B01G510900 chrUn 255057314 255061555 4241 True 568.500000 830 87.041750 952 3549 4 chrUn.!!$R1 2597

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
693 850 0.179045 CGGCTAGGGATTGGGAAGTG 60.179 60.0 0.00 0.0 0.0 3.16 F
837 994 0.179045 ACATGAATACCCTCAGCGCC 60.179 55.0 2.29 0.0 0.0 6.53 F
862 1019 0.250295 TGCCTCCAAGTCAAGAACCG 60.250 55.0 0.00 0.0 0.0 4.44 F
1227 1410 0.599060 TCTACATCAACGTCGGCACA 59.401 50.0 0.00 0.0 0.0 4.57 F
2862 3580 0.101219 GACGATTGCCTGATTTGCCC 59.899 55.0 0.00 0.0 0.0 5.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2739 3455 0.320247 GGAGTGCATCGCCCTGATAG 60.320 60.000 0.00 0.0 34.83 2.08 R
2785 3501 1.238439 CGTTTGACCAGCAGTCCAAT 58.762 50.000 4.63 0.0 45.68 3.16 R
2824 3542 3.674138 CGTCCTGGAATCCATGCAAAAAG 60.674 47.826 0.87 0.0 30.82 2.27 R
3141 3954 0.464373 CAGTCACAGCACACCCTGTT 60.464 55.000 0.00 0.0 43.19 3.16 R
3893 14642 1.604308 CAAGCACATGCCACCCAGA 60.604 57.895 0.00 0.0 43.38 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
47 48 1.606601 GGGTTGGGGTTGCTTCTCC 60.607 63.158 0.00 0.00 0.00 3.71
98 99 0.887247 TGCACTAACGCCAATTGCAT 59.113 45.000 0.00 0.00 38.25 3.96
220 222 4.524802 TCCCACAATGCAAGAATCCTAT 57.475 40.909 0.00 0.00 0.00 2.57
485 499 4.587189 CGGCTAGCAGTACCGGCC 62.587 72.222 18.24 0.00 43.23 6.13
486 500 4.587189 GGCTAGCAGTACCGGCCG 62.587 72.222 21.04 21.04 33.30 6.13
487 501 4.587189 GCTAGCAGTACCGGCCGG 62.587 72.222 42.17 42.17 42.03 6.13
488 502 4.587189 CTAGCAGTACCGGCCGGC 62.587 72.222 43.58 28.55 39.32 6.13
542 556 4.814294 GCGGCGATGAAGTCCGGT 62.814 66.667 12.98 0.00 43.11 5.28
543 557 2.582498 CGGCGATGAAGTCCGGTC 60.582 66.667 0.00 0.00 39.52 4.79
544 558 2.582498 GGCGATGAAGTCCGGTCG 60.582 66.667 0.00 2.95 37.17 4.79
545 559 2.582498 GCGATGAAGTCCGGTCGG 60.582 66.667 11.29 2.52 34.85 4.79
546 560 2.582498 CGATGAAGTCCGGTCGGC 60.582 66.667 0.00 0.34 34.68 5.54
547 561 2.582498 GATGAAGTCCGGTCGGCG 60.582 66.667 0.00 0.00 34.68 6.46
548 562 4.814294 ATGAAGTCCGGTCGGCGC 62.814 66.667 0.00 0.00 34.68 6.53
687 844 4.626081 CCGGCGGCTAGGGATTGG 62.626 72.222 15.42 0.00 0.00 3.16
688 845 4.626081 CGGCGGCTAGGGATTGGG 62.626 72.222 7.61 0.00 0.00 4.12
689 846 3.168528 GGCGGCTAGGGATTGGGA 61.169 66.667 0.00 0.00 0.00 4.37
690 847 2.752807 GGCGGCTAGGGATTGGGAA 61.753 63.158 0.00 0.00 0.00 3.97
691 848 1.227973 GCGGCTAGGGATTGGGAAG 60.228 63.158 0.00 0.00 0.00 3.46
692 849 1.984288 GCGGCTAGGGATTGGGAAGT 61.984 60.000 0.00 0.00 0.00 3.01
693 850 0.179045 CGGCTAGGGATTGGGAAGTG 60.179 60.000 0.00 0.00 0.00 3.16
694 851 0.183731 GGCTAGGGATTGGGAAGTGG 59.816 60.000 0.00 0.00 0.00 4.00
695 852 0.183731 GCTAGGGATTGGGAAGTGGG 59.816 60.000 0.00 0.00 0.00 4.61
696 853 0.846693 CTAGGGATTGGGAAGTGGGG 59.153 60.000 0.00 0.00 0.00 4.96
697 854 0.423956 TAGGGATTGGGAAGTGGGGA 59.576 55.000 0.00 0.00 0.00 4.81
698 855 0.254299 AGGGATTGGGAAGTGGGGAT 60.254 55.000 0.00 0.00 0.00 3.85
699 856 0.636647 GGGATTGGGAAGTGGGGATT 59.363 55.000 0.00 0.00 0.00 3.01
700 857 1.689258 GGGATTGGGAAGTGGGGATTG 60.689 57.143 0.00 0.00 0.00 2.67
701 858 1.689258 GGATTGGGAAGTGGGGATTGG 60.689 57.143 0.00 0.00 0.00 3.16
702 859 0.339510 ATTGGGAAGTGGGGATTGGG 59.660 55.000 0.00 0.00 0.00 4.12
703 860 1.809939 TTGGGAAGTGGGGATTGGGG 61.810 60.000 0.00 0.00 0.00 4.96
704 861 1.933812 GGGAAGTGGGGATTGGGGA 60.934 63.158 0.00 0.00 0.00 4.81
705 862 1.615262 GGAAGTGGGGATTGGGGAG 59.385 63.158 0.00 0.00 0.00 4.30
706 863 1.076705 GAAGTGGGGATTGGGGAGC 60.077 63.158 0.00 0.00 0.00 4.70
707 864 2.893682 GAAGTGGGGATTGGGGAGCG 62.894 65.000 0.00 0.00 0.00 5.03
708 865 3.407967 GTGGGGATTGGGGAGCGA 61.408 66.667 0.00 0.00 0.00 4.93
709 866 3.089874 TGGGGATTGGGGAGCGAG 61.090 66.667 0.00 0.00 0.00 5.03
710 867 3.878667 GGGGATTGGGGAGCGAGG 61.879 72.222 0.00 0.00 0.00 4.63
711 868 4.570874 GGGATTGGGGAGCGAGGC 62.571 72.222 0.00 0.00 0.00 4.70
712 869 3.797353 GGATTGGGGAGCGAGGCA 61.797 66.667 0.00 0.00 0.00 4.75
713 870 2.272146 GATTGGGGAGCGAGGCAA 59.728 61.111 0.00 0.00 0.00 4.52
714 871 2.044946 ATTGGGGAGCGAGGCAAC 60.045 61.111 0.00 0.00 0.00 4.17
728 885 3.102515 GCAACTAGCGAGTCAACGA 57.897 52.632 0.00 0.00 33.58 3.85
729 886 0.985549 GCAACTAGCGAGTCAACGAG 59.014 55.000 0.00 0.00 33.58 4.18
730 887 0.985549 CAACTAGCGAGTCAACGAGC 59.014 55.000 0.00 0.00 33.58 5.03
731 888 0.454620 AACTAGCGAGTCAACGAGCG 60.455 55.000 0.00 0.00 33.58 5.03
732 889 1.296755 ACTAGCGAGTCAACGAGCGA 61.297 55.000 0.00 0.00 35.09 4.93
733 890 0.587737 CTAGCGAGTCAACGAGCGAG 60.588 60.000 0.00 0.72 35.09 5.03
734 891 2.579241 TAGCGAGTCAACGAGCGAGC 62.579 60.000 0.00 0.00 35.09 5.03
735 892 3.234041 CGAGTCAACGAGCGAGCG 61.234 66.667 0.00 0.00 35.09 5.03
736 893 2.876645 GAGTCAACGAGCGAGCGG 60.877 66.667 0.00 0.00 35.12 5.52
737 894 3.612371 GAGTCAACGAGCGAGCGGT 62.612 63.158 0.00 0.00 35.12 5.68
761 918 4.712425 GTGCGGACGTGCGGTACT 62.712 66.667 30.42 0.00 37.81 2.73
762 919 3.055110 TGCGGACGTGCGGTACTA 61.055 61.111 30.42 3.01 37.81 1.82
763 920 2.277756 GCGGACGTGCGGTACTAG 60.278 66.667 30.42 1.21 0.00 2.57
764 921 2.277756 CGGACGTGCGGTACTAGC 60.278 66.667 22.68 6.87 0.00 3.42
765 922 2.758089 CGGACGTGCGGTACTAGCT 61.758 63.158 22.68 0.00 35.28 3.32
766 923 1.431488 CGGACGTGCGGTACTAGCTA 61.431 60.000 22.68 0.00 35.28 3.32
767 924 0.950116 GGACGTGCGGTACTAGCTAT 59.050 55.000 13.32 1.68 35.28 2.97
768 925 1.334779 GGACGTGCGGTACTAGCTATG 60.335 57.143 13.32 8.66 35.28 2.23
769 926 1.332997 GACGTGCGGTACTAGCTATGT 59.667 52.381 13.32 10.95 35.28 2.29
770 927 2.545526 GACGTGCGGTACTAGCTATGTA 59.454 50.000 13.32 0.00 35.28 2.29
771 928 3.144506 ACGTGCGGTACTAGCTATGTAT 58.855 45.455 13.32 0.00 35.28 2.29
772 929 3.567164 ACGTGCGGTACTAGCTATGTATT 59.433 43.478 13.32 0.00 35.28 1.89
773 930 4.756642 ACGTGCGGTACTAGCTATGTATTA 59.243 41.667 13.32 0.00 35.28 0.98
774 931 5.239306 ACGTGCGGTACTAGCTATGTATTAA 59.761 40.000 13.32 0.00 35.28 1.40
775 932 6.072286 ACGTGCGGTACTAGCTATGTATTAAT 60.072 38.462 13.32 0.00 35.28 1.40
776 933 7.119699 ACGTGCGGTACTAGCTATGTATTAATA 59.880 37.037 13.32 0.00 35.28 0.98
777 934 8.127327 CGTGCGGTACTAGCTATGTATTAATAT 58.873 37.037 13.32 0.00 35.28 1.28
802 959 2.842208 TTTTCGCGCTCAATAATGGG 57.158 45.000 5.56 0.00 0.00 4.00
803 960 1.745232 TTTCGCGCTCAATAATGGGT 58.255 45.000 5.56 0.00 0.00 4.51
804 961 2.605837 TTCGCGCTCAATAATGGGTA 57.394 45.000 5.56 0.00 0.00 3.69
805 962 2.831685 TCGCGCTCAATAATGGGTAT 57.168 45.000 5.56 0.00 0.00 2.73
806 963 3.120321 TCGCGCTCAATAATGGGTATT 57.880 42.857 5.56 0.00 32.25 1.89
807 964 3.064207 TCGCGCTCAATAATGGGTATTC 58.936 45.455 5.56 0.00 29.38 1.75
808 965 2.805671 CGCGCTCAATAATGGGTATTCA 59.194 45.455 5.56 0.00 29.38 2.57
809 966 3.436704 CGCGCTCAATAATGGGTATTCAT 59.563 43.478 5.56 0.00 29.38 2.57
810 967 4.629634 CGCGCTCAATAATGGGTATTCATA 59.370 41.667 5.56 0.00 29.38 2.15
811 968 5.445939 CGCGCTCAATAATGGGTATTCATAC 60.446 44.000 5.56 0.00 29.38 2.39
812 969 5.445939 GCGCTCAATAATGGGTATTCATACG 60.446 44.000 0.00 0.00 34.11 3.06
813 970 5.867174 CGCTCAATAATGGGTATTCATACGA 59.133 40.000 0.00 0.00 34.11 3.43
814 971 6.367695 CGCTCAATAATGGGTATTCATACGAA 59.632 38.462 0.00 0.00 34.11 3.85
815 972 7.064609 CGCTCAATAATGGGTATTCATACGAAT 59.935 37.037 0.00 0.00 44.24 3.34
816 973 9.378551 GCTCAATAATGGGTATTCATACGAATA 57.621 33.333 0.00 0.00 42.06 1.75
829 986 7.956420 TTCATACGAATACACATGAATACCC 57.044 36.000 0.00 0.00 33.60 3.69
830 987 7.297936 TCATACGAATACACATGAATACCCT 57.702 36.000 0.00 0.00 0.00 4.34
831 988 7.375834 TCATACGAATACACATGAATACCCTC 58.624 38.462 0.00 0.00 0.00 4.30
832 989 5.607939 ACGAATACACATGAATACCCTCA 57.392 39.130 0.00 0.00 0.00 3.86
833 990 5.601662 ACGAATACACATGAATACCCTCAG 58.398 41.667 0.00 0.00 0.00 3.35
834 991 4.449068 CGAATACACATGAATACCCTCAGC 59.551 45.833 0.00 0.00 0.00 4.26
835 992 2.315925 ACACATGAATACCCTCAGCG 57.684 50.000 0.00 0.00 0.00 5.18
836 993 0.940126 CACATGAATACCCTCAGCGC 59.060 55.000 0.00 0.00 0.00 5.92
837 994 0.179045 ACATGAATACCCTCAGCGCC 60.179 55.000 2.29 0.00 0.00 6.53
838 995 1.069765 ATGAATACCCTCAGCGCCG 59.930 57.895 2.29 0.00 0.00 6.46
839 996 2.967615 GAATACCCTCAGCGCCGC 60.968 66.667 2.29 0.00 0.00 6.53
840 997 4.547367 AATACCCTCAGCGCCGCC 62.547 66.667 4.98 0.00 0.00 6.13
853 1010 4.335647 CCGCCAGTGCCTCCAAGT 62.336 66.667 0.00 0.00 0.00 3.16
854 1011 2.743928 CGCCAGTGCCTCCAAGTC 60.744 66.667 0.00 0.00 0.00 3.01
855 1012 2.431683 GCCAGTGCCTCCAAGTCA 59.568 61.111 0.00 0.00 0.00 3.41
856 1013 1.228245 GCCAGTGCCTCCAAGTCAA 60.228 57.895 0.00 0.00 0.00 3.18
857 1014 1.239968 GCCAGTGCCTCCAAGTCAAG 61.240 60.000 0.00 0.00 0.00 3.02
858 1015 0.397941 CCAGTGCCTCCAAGTCAAGA 59.602 55.000 0.00 0.00 0.00 3.02
859 1016 1.202806 CCAGTGCCTCCAAGTCAAGAA 60.203 52.381 0.00 0.00 0.00 2.52
860 1017 1.876156 CAGTGCCTCCAAGTCAAGAAC 59.124 52.381 0.00 0.00 0.00 3.01
861 1018 1.202818 AGTGCCTCCAAGTCAAGAACC 60.203 52.381 0.00 0.00 0.00 3.62
862 1019 0.250295 TGCCTCCAAGTCAAGAACCG 60.250 55.000 0.00 0.00 0.00 4.44
868 1025 3.664107 TCCAAGTCAAGAACCGATTCAG 58.336 45.455 0.00 0.00 37.29 3.02
881 1038 4.798574 ACCGATTCAGAAAATGCAACTTC 58.201 39.130 0.00 0.00 0.00 3.01
913 1071 8.601845 AAAAATATAAGTGGCCAAACTGAAAC 57.398 30.769 7.24 0.00 0.00 2.78
922 1080 3.259123 GGCCAAACTGAAACATCCATTCT 59.741 43.478 0.00 0.00 0.00 2.40
926 1084 4.425577 AACTGAAACATCCATTCTTCGC 57.574 40.909 0.00 0.00 0.00 4.70
929 1087 4.191544 CTGAAACATCCATTCTTCGCCTA 58.808 43.478 0.00 0.00 0.00 3.93
933 1091 2.965831 ACATCCATTCTTCGCCTAGCTA 59.034 45.455 0.00 0.00 0.00 3.32
936 1111 1.342819 CCATTCTTCGCCTAGCTAGCT 59.657 52.381 23.12 23.12 0.00 3.32
965 1148 2.901840 CGCATCAATCCCCCACCG 60.902 66.667 0.00 0.00 0.00 4.94
966 1149 3.219198 GCATCAATCCCCCACCGC 61.219 66.667 0.00 0.00 0.00 5.68
968 1151 2.696125 ATCAATCCCCCACCGCCT 60.696 61.111 0.00 0.00 0.00 5.52
1185 1368 2.986413 CTCCGCGAGATCCCCGAT 60.986 66.667 8.23 0.00 0.00 4.18
1227 1410 0.599060 TCTACATCAACGTCGGCACA 59.401 50.000 0.00 0.00 0.00 4.57
1895 2308 1.280998 ACCTGTAGGCGCTGGTAAAAT 59.719 47.619 7.64 0.00 38.63 1.82
1897 2310 2.752903 CCTGTAGGCGCTGGTAAAATTT 59.247 45.455 7.64 0.00 0.00 1.82
1923 2341 2.787866 CCCCTCCTCTTCCTCCCA 59.212 66.667 0.00 0.00 0.00 4.37
2378 3085 2.672098 TGTTTTCCCCAAGCTTTGCTA 58.328 42.857 0.00 0.00 38.25 3.49
2660 3372 1.479389 CCTCCTCCCACAGCACTTTTT 60.479 52.381 0.00 0.00 0.00 1.94
2680 3392 6.476243 TTTTCCACAGCGATAAGTAGTTTC 57.524 37.500 0.00 0.00 0.00 2.78
2684 3396 5.127194 TCCACAGCGATAAGTAGTTTCAGAT 59.873 40.000 0.00 0.00 0.00 2.90
2690 3402 7.168302 CAGCGATAAGTAGTTTCAGATGTAAGG 59.832 40.741 0.00 0.00 0.00 2.69
2691 3403 6.979238 GCGATAAGTAGTTTCAGATGTAAGGT 59.021 38.462 0.00 0.00 0.00 3.50
2698 3410 5.026790 AGTTTCAGATGTAAGGTAGGAGCT 58.973 41.667 0.00 0.00 0.00 4.09
2739 3455 8.715088 CATTCTGAAGGAAAATGGAAAACAATC 58.285 33.333 0.00 0.00 37.49 2.67
2768 3484 2.874701 GCGATGCACTCCAGTCATTATT 59.125 45.455 0.00 0.00 0.00 1.40
2824 3542 2.665052 CGTCCCTTGCGTTAGTAAAGTC 59.335 50.000 0.00 0.00 0.00 3.01
2862 3580 0.101219 GACGATTGCCTGATTTGCCC 59.899 55.000 0.00 0.00 0.00 5.36
2863 3581 1.322538 ACGATTGCCTGATTTGCCCC 61.323 55.000 0.00 0.00 0.00 5.80
2864 3582 1.825341 GATTGCCTGATTTGCCCCC 59.175 57.895 0.00 0.00 0.00 5.40
2929 3742 5.103000 CCTATTGCCGCTCACAGTATATAC 58.897 45.833 4.60 4.60 0.00 1.47
3023 3836 3.357079 CCTGCAAGCCGCGAAAGT 61.357 61.111 8.23 0.00 46.97 2.66
3024 3837 2.127118 CTGCAAGCCGCGAAAGTG 60.127 61.111 8.23 0.54 46.97 3.16
3067 3880 0.940126 CATTGCGGTATCTGGAGCAC 59.060 55.000 0.00 0.00 39.51 4.40
3113 3926 1.332997 GGTCATCAGTGCTAGCAATGC 59.667 52.381 34.19 22.14 41.18 3.56
3141 3954 0.249955 TGATGCAGAAGATCACGGCA 59.750 50.000 16.35 16.35 41.74 5.69
3206 4019 2.520069 GGATCCTTCCGATGCTCTAGA 58.480 52.381 3.84 0.00 36.43 2.43
3411 9730 9.614792 ACCAGTGTTTAGGAAATATAATGTCTC 57.385 33.333 0.00 0.00 0.00 3.36
3412 9731 9.613428 CCAGTGTTTAGGAAATATAATGTCTCA 57.387 33.333 0.00 0.00 0.00 3.27
3438 9775 1.075601 TCTGCAGGGTCCTGGAAAAT 58.924 50.000 15.13 0.00 43.52 1.82
3551 9895 5.418209 CAGGCTGTACTAACTACCAAGTACT 59.582 44.000 6.28 0.00 45.41 2.73
3552 9896 5.651576 AGGCTGTACTAACTACCAAGTACTC 59.348 44.000 12.38 5.87 45.41 2.59
3553 9897 5.163571 GGCTGTACTAACTACCAAGTACTCC 60.164 48.000 12.38 9.94 45.41 3.85
3554 9898 5.163571 GCTGTACTAACTACCAAGTACTCCC 60.164 48.000 12.38 0.40 45.41 4.30
3555 9899 6.144845 TGTACTAACTACCAAGTACTCCCT 57.855 41.667 12.38 0.00 45.41 4.20
3556 9900 6.183347 TGTACTAACTACCAAGTACTCCCTC 58.817 44.000 12.38 0.00 45.41 4.30
3557 9901 4.608269 ACTAACTACCAAGTACTCCCTCC 58.392 47.826 0.00 0.00 33.75 4.30
3558 9902 2.140839 ACTACCAAGTACTCCCTCCG 57.859 55.000 0.00 0.00 32.84 4.63
3559 9903 1.357079 ACTACCAAGTACTCCCTCCGT 59.643 52.381 0.00 0.00 32.84 4.69
3560 9904 2.022934 CTACCAAGTACTCCCTCCGTC 58.977 57.143 0.00 0.00 0.00 4.79
3561 9905 0.614134 ACCAAGTACTCCCTCCGTCC 60.614 60.000 0.00 0.00 0.00 4.79
3562 9906 1.664321 CCAAGTACTCCCTCCGTCCG 61.664 65.000 0.00 0.00 0.00 4.79
3563 9907 0.679002 CAAGTACTCCCTCCGTCCGA 60.679 60.000 0.00 0.00 0.00 4.55
3564 9908 0.038744 AAGTACTCCCTCCGTCCGAA 59.961 55.000 0.00 0.00 0.00 4.30
3565 9909 0.038744 AGTACTCCCTCCGTCCGAAA 59.961 55.000 0.00 0.00 0.00 3.46
3566 9910 0.890683 GTACTCCCTCCGTCCGAAAA 59.109 55.000 0.00 0.00 0.00 2.29
3567 9911 1.273327 GTACTCCCTCCGTCCGAAAAA 59.727 52.381 0.00 0.00 0.00 1.94
3568 9912 0.320697 ACTCCCTCCGTCCGAAAAAG 59.679 55.000 0.00 0.00 0.00 2.27
3569 9913 1.004200 TCCCTCCGTCCGAAAAAGC 60.004 57.895 0.00 0.00 0.00 3.51
3570 9914 1.003718 CCCTCCGTCCGAAAAAGCT 60.004 57.895 0.00 0.00 0.00 3.74
3571 9915 1.019805 CCCTCCGTCCGAAAAAGCTC 61.020 60.000 0.00 0.00 0.00 4.09
3572 9916 0.037232 CCTCCGTCCGAAAAAGCTCT 60.037 55.000 0.00 0.00 0.00 4.09
3573 9917 1.203994 CCTCCGTCCGAAAAAGCTCTA 59.796 52.381 0.00 0.00 0.00 2.43
3574 9918 2.531206 CTCCGTCCGAAAAAGCTCTAG 58.469 52.381 0.00 0.00 0.00 2.43
3575 9919 2.163815 CTCCGTCCGAAAAAGCTCTAGA 59.836 50.000 0.00 0.00 0.00 2.43
3576 9920 2.758979 TCCGTCCGAAAAAGCTCTAGAT 59.241 45.455 0.00 0.00 0.00 1.98
3577 9921 3.949754 TCCGTCCGAAAAAGCTCTAGATA 59.050 43.478 0.00 0.00 0.00 1.98
3578 9922 4.043073 CCGTCCGAAAAAGCTCTAGATAC 58.957 47.826 0.00 0.00 0.00 2.24
3579 9923 4.439700 CCGTCCGAAAAAGCTCTAGATACA 60.440 45.833 0.00 0.00 0.00 2.29
3580 9924 5.282510 CGTCCGAAAAAGCTCTAGATACAT 58.717 41.667 0.00 0.00 0.00 2.29
3581 9925 5.399892 CGTCCGAAAAAGCTCTAGATACATC 59.600 44.000 0.00 0.00 0.00 3.06
3582 9926 5.692654 GTCCGAAAAAGCTCTAGATACATCC 59.307 44.000 0.00 0.00 0.00 3.51
3583 9927 5.362717 TCCGAAAAAGCTCTAGATACATCCA 59.637 40.000 0.00 0.00 0.00 3.41
3584 9928 6.042093 TCCGAAAAAGCTCTAGATACATCCAT 59.958 38.462 0.00 0.00 0.00 3.41
3585 9929 6.708054 CCGAAAAAGCTCTAGATACATCCATT 59.292 38.462 0.00 0.00 0.00 3.16
3586 9930 7.227512 CCGAAAAAGCTCTAGATACATCCATTT 59.772 37.037 0.00 0.00 0.00 2.32
3587 9931 8.066595 CGAAAAAGCTCTAGATACATCCATTTG 58.933 37.037 0.00 0.00 0.00 2.32
3588 9932 9.113838 GAAAAAGCTCTAGATACATCCATTTGA 57.886 33.333 0.00 0.00 0.00 2.69
3589 9933 8.674263 AAAAGCTCTAGATACATCCATTTGAG 57.326 34.615 0.00 0.00 0.00 3.02
3590 9934 6.357579 AGCTCTAGATACATCCATTTGAGG 57.642 41.667 0.00 0.00 0.00 3.86
3591 9935 5.248020 AGCTCTAGATACATCCATTTGAGGG 59.752 44.000 0.00 0.00 0.00 4.30
3592 9936 5.247110 GCTCTAGATACATCCATTTGAGGGA 59.753 44.000 0.00 0.00 39.14 4.20
3593 9937 6.672266 TCTAGATACATCCATTTGAGGGAC 57.328 41.667 0.00 0.00 37.23 4.46
3594 9938 6.143206 TCTAGATACATCCATTTGAGGGACA 58.857 40.000 0.00 0.00 37.23 4.02
3595 9939 5.715439 AGATACATCCATTTGAGGGACAA 57.285 39.130 0.00 0.00 37.23 3.18
3596 9940 5.688807 AGATACATCCATTTGAGGGACAAG 58.311 41.667 0.00 0.00 39.77 3.16
3597 9941 2.450476 ACATCCATTTGAGGGACAAGC 58.550 47.619 0.00 0.00 39.77 4.01
3598 9942 2.042162 ACATCCATTTGAGGGACAAGCT 59.958 45.455 0.00 0.00 39.77 3.74
3599 9943 2.978156 TCCATTTGAGGGACAAGCTT 57.022 45.000 0.00 0.00 39.77 3.74
3600 9944 3.243359 TCCATTTGAGGGACAAGCTTT 57.757 42.857 0.00 0.00 39.77 3.51
3601 9945 3.575805 TCCATTTGAGGGACAAGCTTTT 58.424 40.909 0.00 0.00 39.77 2.27
3602 9946 3.966665 TCCATTTGAGGGACAAGCTTTTT 59.033 39.130 0.00 0.00 39.77 1.94
3603 9947 4.039124 TCCATTTGAGGGACAAGCTTTTTC 59.961 41.667 0.00 0.00 39.77 2.29
3604 9948 3.708563 TTTGAGGGACAAGCTTTTTCG 57.291 42.857 0.00 0.00 39.77 3.46
3605 9949 1.604604 TGAGGGACAAGCTTTTTCGG 58.395 50.000 0.00 0.00 0.00 4.30
3606 9950 1.142060 TGAGGGACAAGCTTTTTCGGA 59.858 47.619 0.00 0.00 0.00 4.55
3607 9951 1.535896 GAGGGACAAGCTTTTTCGGAC 59.464 52.381 0.00 0.00 0.00 4.79
3608 9952 0.237498 GGGACAAGCTTTTTCGGACG 59.763 55.000 0.00 0.00 0.00 4.79
3609 9953 0.237498 GGACAAGCTTTTTCGGACGG 59.763 55.000 0.00 0.00 0.00 4.79
3610 9954 1.223187 GACAAGCTTTTTCGGACGGA 58.777 50.000 0.00 0.00 0.00 4.69
3611 9955 1.194772 GACAAGCTTTTTCGGACGGAG 59.805 52.381 0.00 0.00 0.00 4.63
3612 9956 0.517316 CAAGCTTTTTCGGACGGAGG 59.483 55.000 0.00 0.00 0.00 4.30
3613 9957 0.605589 AAGCTTTTTCGGACGGAGGG 60.606 55.000 0.00 0.00 0.00 4.30
3614 9958 1.004200 GCTTTTTCGGACGGAGGGA 60.004 57.895 0.00 0.00 0.00 4.20
3615 9959 1.019805 GCTTTTTCGGACGGAGGGAG 61.020 60.000 0.00 0.00 0.00 4.30
3616 9960 0.320697 CTTTTTCGGACGGAGGGAGT 59.679 55.000 0.00 0.00 0.00 3.85
3617 9961 1.547372 CTTTTTCGGACGGAGGGAGTA 59.453 52.381 0.00 0.00 0.00 2.59
3618 9962 0.890683 TTTTCGGACGGAGGGAGTAC 59.109 55.000 0.00 0.00 0.00 2.73
3665 14414 2.760092 AGGTTTTGCACTGTTGTGTGAT 59.240 40.909 0.00 0.00 45.44 3.06
3699 14448 2.861147 AGCAAGGGTAAAGTCACTCC 57.139 50.000 0.00 0.00 0.00 3.85
3927 14677 1.267806 GCTTGTGCAGTGTGTATGCTT 59.732 47.619 0.00 0.00 44.17 3.91
4111 14945 8.502387 GGTTATATCTGTCTTTGAGATCATTGC 58.498 37.037 0.00 0.00 32.32 3.56
4312 15149 2.938956 ACAGTCTTCCCTTCACTTGG 57.061 50.000 0.00 0.00 0.00 3.61
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
47 48 2.049433 AACGTGAACCGGAGAGCG 60.049 61.111 9.46 10.15 42.24 5.03
115 116 3.021695 CGGGTACTTGTACCTCTCATGA 58.978 50.000 23.96 0.00 39.97 3.07
220 222 2.370459 AATGGGACTGGTGCTGGCAA 62.370 55.000 0.00 0.00 0.00 4.52
226 228 2.087646 GAAGAAGAATGGGACTGGTGC 58.912 52.381 0.00 0.00 0.00 5.01
525 539 4.814294 ACCGGACTTCATCGCCGC 62.814 66.667 9.46 0.00 43.52 6.53
526 540 2.582498 GACCGGACTTCATCGCCG 60.582 66.667 9.46 0.00 44.42 6.46
527 541 2.582498 CGACCGGACTTCATCGCC 60.582 66.667 9.46 0.00 0.00 5.54
528 542 2.582498 CCGACCGGACTTCATCGC 60.582 66.667 9.46 0.00 37.50 4.58
529 543 2.582498 GCCGACCGGACTTCATCG 60.582 66.667 9.46 5.52 37.50 3.84
530 544 2.582498 CGCCGACCGGACTTCATC 60.582 66.667 9.46 0.00 37.50 2.92
531 545 4.814294 GCGCCGACCGGACTTCAT 62.814 66.667 9.46 0.00 37.50 2.57
670 827 4.626081 CCAATCCCTAGCCGCCGG 62.626 72.222 0.00 0.00 0.00 6.13
671 828 4.626081 CCCAATCCCTAGCCGCCG 62.626 72.222 0.00 0.00 0.00 6.46
672 829 2.682582 CTTCCCAATCCCTAGCCGCC 62.683 65.000 0.00 0.00 0.00 6.13
673 830 1.227973 CTTCCCAATCCCTAGCCGC 60.228 63.158 0.00 0.00 0.00 6.53
674 831 0.179045 CACTTCCCAATCCCTAGCCG 60.179 60.000 0.00 0.00 0.00 5.52
675 832 0.183731 CCACTTCCCAATCCCTAGCC 59.816 60.000 0.00 0.00 0.00 3.93
676 833 0.183731 CCCACTTCCCAATCCCTAGC 59.816 60.000 0.00 0.00 0.00 3.42
677 834 0.846693 CCCCACTTCCCAATCCCTAG 59.153 60.000 0.00 0.00 0.00 3.02
678 835 0.423956 TCCCCACTTCCCAATCCCTA 59.576 55.000 0.00 0.00 0.00 3.53
679 836 0.254299 ATCCCCACTTCCCAATCCCT 60.254 55.000 0.00 0.00 0.00 4.20
680 837 0.636647 AATCCCCACTTCCCAATCCC 59.363 55.000 0.00 0.00 0.00 3.85
681 838 1.689258 CCAATCCCCACTTCCCAATCC 60.689 57.143 0.00 0.00 0.00 3.01
682 839 1.689258 CCCAATCCCCACTTCCCAATC 60.689 57.143 0.00 0.00 0.00 2.67
683 840 0.339510 CCCAATCCCCACTTCCCAAT 59.660 55.000 0.00 0.00 0.00 3.16
684 841 1.780327 CCCAATCCCCACTTCCCAA 59.220 57.895 0.00 0.00 0.00 4.12
685 842 2.245379 CCCCAATCCCCACTTCCCA 61.245 63.158 0.00 0.00 0.00 4.37
686 843 1.933812 TCCCCAATCCCCACTTCCC 60.934 63.158 0.00 0.00 0.00 3.97
687 844 1.615262 CTCCCCAATCCCCACTTCC 59.385 63.158 0.00 0.00 0.00 3.46
688 845 1.076705 GCTCCCCAATCCCCACTTC 60.077 63.158 0.00 0.00 0.00 3.01
689 846 2.983879 CGCTCCCCAATCCCCACTT 61.984 63.158 0.00 0.00 0.00 3.16
690 847 3.411517 CGCTCCCCAATCCCCACT 61.412 66.667 0.00 0.00 0.00 4.00
691 848 3.406595 CTCGCTCCCCAATCCCCAC 62.407 68.421 0.00 0.00 0.00 4.61
692 849 3.089874 CTCGCTCCCCAATCCCCA 61.090 66.667 0.00 0.00 0.00 4.96
693 850 3.878667 CCTCGCTCCCCAATCCCC 61.879 72.222 0.00 0.00 0.00 4.81
694 851 4.570874 GCCTCGCTCCCCAATCCC 62.571 72.222 0.00 0.00 0.00 3.85
695 852 3.344137 TTGCCTCGCTCCCCAATCC 62.344 63.158 0.00 0.00 0.00 3.01
696 853 2.115291 GTTGCCTCGCTCCCCAATC 61.115 63.158 0.00 0.00 0.00 2.67
697 854 1.271840 TAGTTGCCTCGCTCCCCAAT 61.272 55.000 0.00 0.00 0.00 3.16
698 855 1.899437 CTAGTTGCCTCGCTCCCCAA 61.899 60.000 0.00 0.00 0.00 4.12
699 856 2.284331 TAGTTGCCTCGCTCCCCA 60.284 61.111 0.00 0.00 0.00 4.96
700 857 2.501610 CTAGTTGCCTCGCTCCCC 59.498 66.667 0.00 0.00 0.00 4.81
701 858 2.202946 GCTAGTTGCCTCGCTCCC 60.203 66.667 0.00 0.00 35.15 4.30
702 859 2.583593 CGCTAGTTGCCTCGCTCC 60.584 66.667 0.00 0.00 38.78 4.70
703 860 1.587613 CTCGCTAGTTGCCTCGCTC 60.588 63.158 0.00 0.00 38.78 5.03
704 861 2.272918 GACTCGCTAGTTGCCTCGCT 62.273 60.000 0.00 0.00 35.56 4.93
705 862 1.874466 GACTCGCTAGTTGCCTCGC 60.874 63.158 0.00 0.00 35.56 5.03
706 863 0.109272 TTGACTCGCTAGTTGCCTCG 60.109 55.000 0.00 0.00 35.56 4.63
707 864 1.351153 GTTGACTCGCTAGTTGCCTC 58.649 55.000 0.00 0.00 35.56 4.70
708 865 0.388649 CGTTGACTCGCTAGTTGCCT 60.389 55.000 0.00 0.00 35.56 4.75
709 866 0.388134 TCGTTGACTCGCTAGTTGCC 60.388 55.000 0.00 0.00 35.56 4.52
710 867 0.985549 CTCGTTGACTCGCTAGTTGC 59.014 55.000 0.00 0.00 35.56 4.17
711 868 0.985549 GCTCGTTGACTCGCTAGTTG 59.014 55.000 0.00 0.00 35.56 3.16
712 869 0.454620 CGCTCGTTGACTCGCTAGTT 60.455 55.000 0.00 0.00 35.56 2.24
713 870 1.134901 CGCTCGTTGACTCGCTAGT 59.865 57.895 0.00 0.00 39.21 2.57
714 871 0.587737 CTCGCTCGTTGACTCGCTAG 60.588 60.000 0.00 0.00 0.00 3.42
715 872 1.424240 CTCGCTCGTTGACTCGCTA 59.576 57.895 0.00 0.00 0.00 4.26
716 873 2.177038 CTCGCTCGTTGACTCGCT 59.823 61.111 0.00 0.00 0.00 4.93
717 874 3.537297 GCTCGCTCGTTGACTCGC 61.537 66.667 0.00 0.00 0.00 5.03
718 875 3.234041 CGCTCGCTCGTTGACTCG 61.234 66.667 0.00 0.00 0.00 4.18
719 876 2.876645 CCGCTCGCTCGTTGACTC 60.877 66.667 0.00 0.00 0.00 3.36
720 877 3.671411 ACCGCTCGCTCGTTGACT 61.671 61.111 0.00 0.00 0.00 3.41
721 878 3.470567 CACCGCTCGCTCGTTGAC 61.471 66.667 0.00 0.00 0.00 3.18
722 879 4.717629 CCACCGCTCGCTCGTTGA 62.718 66.667 0.00 0.00 0.00 3.18
744 901 3.326889 TAGTACCGCACGTCCGCAC 62.327 63.158 0.00 0.00 0.00 5.34
745 902 3.042842 CTAGTACCGCACGTCCGCA 62.043 63.158 0.00 0.00 0.00 5.69
746 903 2.277756 CTAGTACCGCACGTCCGC 60.278 66.667 0.00 0.00 0.00 5.54
747 904 1.431488 TAGCTAGTACCGCACGTCCG 61.431 60.000 0.00 0.00 0.00 4.79
748 905 0.950116 ATAGCTAGTACCGCACGTCC 59.050 55.000 0.00 0.00 0.00 4.79
749 906 1.332997 ACATAGCTAGTACCGCACGTC 59.667 52.381 0.00 0.00 0.00 4.34
750 907 1.386533 ACATAGCTAGTACCGCACGT 58.613 50.000 0.00 0.00 0.00 4.49
751 908 3.826236 ATACATAGCTAGTACCGCACG 57.174 47.619 0.00 0.00 0.00 5.34
782 939 2.490115 ACCCATTATTGAGCGCGAAAAA 59.510 40.909 12.10 0.00 0.00 1.94
783 940 2.088423 ACCCATTATTGAGCGCGAAAA 58.912 42.857 12.10 0.00 0.00 2.29
784 941 1.745232 ACCCATTATTGAGCGCGAAA 58.255 45.000 12.10 0.00 0.00 3.46
785 942 2.605837 TACCCATTATTGAGCGCGAA 57.394 45.000 12.10 0.00 0.00 4.70
786 943 2.831685 ATACCCATTATTGAGCGCGA 57.168 45.000 12.10 0.00 0.00 5.87
787 944 2.805671 TGAATACCCATTATTGAGCGCG 59.194 45.455 0.00 0.00 29.85 6.86
788 945 5.445939 CGTATGAATACCCATTATTGAGCGC 60.446 44.000 0.00 0.00 29.85 5.92
789 946 5.867174 TCGTATGAATACCCATTATTGAGCG 59.133 40.000 0.00 0.00 29.85 5.03
790 947 7.667043 TTCGTATGAATACCCATTATTGAGC 57.333 36.000 0.00 0.00 29.85 4.26
803 960 9.647797 GGGTATTCATGTGTATTCGTATGAATA 57.352 33.333 12.47 12.47 44.19 1.75
804 961 8.375506 AGGGTATTCATGTGTATTCGTATGAAT 58.624 33.333 14.45 14.45 46.33 2.57
805 962 7.732025 AGGGTATTCATGTGTATTCGTATGAA 58.268 34.615 0.00 0.00 41.93 2.57
806 963 7.014808 TGAGGGTATTCATGTGTATTCGTATGA 59.985 37.037 0.00 0.00 0.00 2.15
807 964 7.151976 TGAGGGTATTCATGTGTATTCGTATG 58.848 38.462 0.00 0.00 0.00 2.39
808 965 7.297936 TGAGGGTATTCATGTGTATTCGTAT 57.702 36.000 0.00 0.00 0.00 3.06
809 966 6.718522 TGAGGGTATTCATGTGTATTCGTA 57.281 37.500 0.00 0.00 0.00 3.43
810 967 5.601662 CTGAGGGTATTCATGTGTATTCGT 58.398 41.667 0.00 0.00 0.00 3.85
811 968 4.449068 GCTGAGGGTATTCATGTGTATTCG 59.551 45.833 0.00 0.00 0.00 3.34
812 969 4.449068 CGCTGAGGGTATTCATGTGTATTC 59.551 45.833 0.00 0.00 0.00 1.75
813 970 4.380531 CGCTGAGGGTATTCATGTGTATT 58.619 43.478 0.00 0.00 0.00 1.89
814 971 3.803715 GCGCTGAGGGTATTCATGTGTAT 60.804 47.826 0.00 0.00 0.00 2.29
815 972 2.483013 GCGCTGAGGGTATTCATGTGTA 60.483 50.000 0.00 0.00 0.00 2.90
816 973 1.743772 GCGCTGAGGGTATTCATGTGT 60.744 52.381 0.00 0.00 0.00 3.72
817 974 0.940126 GCGCTGAGGGTATTCATGTG 59.060 55.000 0.00 0.00 0.00 3.21
818 975 0.179045 GGCGCTGAGGGTATTCATGT 60.179 55.000 7.64 0.00 0.00 3.21
819 976 1.224069 CGGCGCTGAGGGTATTCATG 61.224 60.000 11.90 0.00 0.00 3.07
820 977 1.069765 CGGCGCTGAGGGTATTCAT 59.930 57.895 11.90 0.00 0.00 2.57
821 978 2.499205 CGGCGCTGAGGGTATTCA 59.501 61.111 11.90 0.00 0.00 2.57
822 979 2.967615 GCGGCGCTGAGGGTATTC 60.968 66.667 26.86 0.00 0.00 1.75
823 980 4.547367 GGCGGCGCTGAGGGTATT 62.547 66.667 32.30 0.00 0.00 1.89
836 993 4.335647 ACTTGGAGGCACTGGCGG 62.336 66.667 0.00 0.00 41.55 6.13
837 994 2.743928 GACTTGGAGGCACTGGCG 60.744 66.667 0.00 0.00 41.55 5.69
838 995 1.228245 TTGACTTGGAGGCACTGGC 60.228 57.895 0.00 0.00 41.55 4.85
839 996 0.397941 TCTTGACTTGGAGGCACTGG 59.602 55.000 0.00 0.00 41.55 4.00
840 997 1.876156 GTTCTTGACTTGGAGGCACTG 59.124 52.381 0.00 0.00 41.55 3.66
842 999 1.239347 GGTTCTTGACTTGGAGGCAC 58.761 55.000 0.00 0.00 29.12 5.01
843 1000 0.250295 CGGTTCTTGACTTGGAGGCA 60.250 55.000 0.00 0.00 0.00 4.75
844 1001 0.034896 TCGGTTCTTGACTTGGAGGC 59.965 55.000 0.00 0.00 0.00 4.70
845 1002 2.770164 ATCGGTTCTTGACTTGGAGG 57.230 50.000 0.00 0.00 0.00 4.30
846 1003 3.664107 TGAATCGGTTCTTGACTTGGAG 58.336 45.455 10.29 0.00 35.33 3.86
847 1004 3.323691 TCTGAATCGGTTCTTGACTTGGA 59.676 43.478 10.29 0.00 35.33 3.53
848 1005 3.664107 TCTGAATCGGTTCTTGACTTGG 58.336 45.455 10.29 0.00 35.33 3.61
849 1006 5.673337 TTTCTGAATCGGTTCTTGACTTG 57.327 39.130 10.29 0.00 35.33 3.16
850 1007 6.672147 CATTTTCTGAATCGGTTCTTGACTT 58.328 36.000 10.29 0.00 35.33 3.01
851 1008 5.335191 GCATTTTCTGAATCGGTTCTTGACT 60.335 40.000 10.29 0.00 35.33 3.41
852 1009 4.853743 GCATTTTCTGAATCGGTTCTTGAC 59.146 41.667 10.29 0.00 35.33 3.18
853 1010 4.518590 TGCATTTTCTGAATCGGTTCTTGA 59.481 37.500 10.29 5.35 35.33 3.02
854 1011 4.797471 TGCATTTTCTGAATCGGTTCTTG 58.203 39.130 10.29 2.94 35.33 3.02
855 1012 5.010012 AGTTGCATTTTCTGAATCGGTTCTT 59.990 36.000 10.29 0.00 35.33 2.52
856 1013 4.520492 AGTTGCATTTTCTGAATCGGTTCT 59.480 37.500 10.29 0.00 35.33 3.01
857 1014 4.798574 AGTTGCATTTTCTGAATCGGTTC 58.201 39.130 0.08 0.08 34.85 3.62
858 1015 4.853924 AGTTGCATTTTCTGAATCGGTT 57.146 36.364 0.00 0.00 0.00 4.44
859 1016 4.278170 TGAAGTTGCATTTTCTGAATCGGT 59.722 37.500 10.81 0.00 0.00 4.69
860 1017 4.797471 TGAAGTTGCATTTTCTGAATCGG 58.203 39.130 10.81 0.00 0.00 4.18
861 1018 4.855388 CCTGAAGTTGCATTTTCTGAATCG 59.145 41.667 14.89 0.00 0.00 3.34
862 1019 5.776744 ACCTGAAGTTGCATTTTCTGAATC 58.223 37.500 14.89 0.00 0.00 2.52
891 1048 6.909550 TGTTTCAGTTTGGCCACTTATATT 57.090 33.333 3.88 0.00 0.00 1.28
913 1071 2.540265 AGCTAGGCGAAGAATGGATG 57.460 50.000 0.00 0.00 0.00 3.51
922 1080 1.613317 TTGGCAGCTAGCTAGGCGAA 61.613 55.000 18.86 17.71 44.79 4.70
926 1084 1.147153 GGGTTGGCAGCTAGCTAGG 59.853 63.158 18.86 7.37 44.79 3.02
929 1087 4.101448 CGGGGTTGGCAGCTAGCT 62.101 66.667 12.68 12.68 44.79 3.32
986 1169 4.280494 CCATACCGACGGCGAGGG 62.280 72.222 15.16 20.80 40.82 4.30
1008 1191 3.062466 CACGCCTCCGTCCTCTCA 61.062 66.667 0.00 0.00 46.39 3.27
1087 1270 1.078759 GAGACGAGGTTGGTGATGCG 61.079 60.000 0.00 0.00 0.00 4.73
1152 1335 4.437587 AGGCAGTGGAGCATGGCC 62.438 66.667 0.00 0.00 42.61 5.36
1227 1410 1.379309 GAGCCAGTCCTCCGAGAGT 60.379 63.158 0.00 0.00 0.00 3.24
1330 1513 2.441164 GAGGAGCTCGAGGCAGGA 60.441 66.667 15.58 0.00 44.79 3.86
1403 1648 3.777910 GCGGGCTAGGGTTTCCGA 61.778 66.667 4.71 0.00 44.69 4.55
1405 1650 4.851179 CGGCGGGCTAGGGTTTCC 62.851 72.222 0.00 0.00 0.00 3.13
1895 2308 0.849540 GAGGAGGGGGAAAGGGGAAA 60.850 60.000 0.00 0.00 0.00 3.13
1897 2310 1.772561 AAGAGGAGGGGGAAAGGGGA 61.773 60.000 0.00 0.00 0.00 4.81
1923 2341 1.003355 CCTGGTCCACGAGCAACAT 60.003 57.895 0.00 0.00 39.59 2.71
2286 2991 2.279073 CGCCCTCCTCCACCTCTA 59.721 66.667 0.00 0.00 0.00 2.43
2378 3085 1.153168 AGAACAACACGCAGGCACT 60.153 52.632 0.00 0.00 43.88 4.40
2625 3334 1.448013 GAGGGACACGCTAAGGCAC 60.448 63.158 0.00 0.00 38.60 5.01
2660 3372 4.461431 TCTGAAACTACTTATCGCTGTGGA 59.539 41.667 0.00 0.00 0.00 4.02
2680 3392 3.133721 AGCAAGCTCCTACCTTACATCTG 59.866 47.826 0.00 0.00 0.00 2.90
2684 3396 3.181465 GCATAGCAAGCTCCTACCTTACA 60.181 47.826 0.00 0.00 0.00 2.41
2690 3402 2.332063 TTGGCATAGCAAGCTCCTAC 57.668 50.000 0.00 0.00 0.00 3.18
2691 3403 3.582998 AATTGGCATAGCAAGCTCCTA 57.417 42.857 0.00 0.00 0.00 2.94
2698 3410 5.918426 TCAGAATGAAATTGGCATAGCAA 57.082 34.783 0.00 0.00 45.97 3.91
2739 3455 0.320247 GGAGTGCATCGCCCTGATAG 60.320 60.000 0.00 0.00 34.83 2.08
2768 3484 7.326454 CAGTCCAATATTTCTTCAGAGACAGA 58.674 38.462 0.00 0.00 0.00 3.41
2785 3501 1.238439 CGTTTGACCAGCAGTCCAAT 58.762 50.000 4.63 0.00 45.68 3.16
2819 3535 5.511888 CCTGGAATCCATGCAAAAAGACTTT 60.512 40.000 0.87 0.00 30.82 2.66
2824 3542 3.674138 CGTCCTGGAATCCATGCAAAAAG 60.674 47.826 0.87 0.00 30.82 2.27
2862 3580 3.951563 TCAAATAACAGGGAGATGGGG 57.048 47.619 0.00 0.00 0.00 4.96
2863 3581 5.116084 TCTTCAAATAACAGGGAGATGGG 57.884 43.478 0.00 0.00 0.00 4.00
2864 3582 6.359804 TCATCTTCAAATAACAGGGAGATGG 58.640 40.000 8.79 0.00 33.57 3.51
2865 3583 6.017275 GCTCATCTTCAAATAACAGGGAGATG 60.017 42.308 0.00 0.00 33.91 2.90
2929 3742 3.314635 GTGCCATTAGAAGCAAGATGGAG 59.685 47.826 5.46 0.00 41.20 3.86
2976 3789 2.061773 GAGTCATGTGAACTGTCCACG 58.938 52.381 0.00 0.00 37.34 4.94
3023 3836 2.591429 CGCTGGACTGTGCCAACA 60.591 61.111 0.00 0.00 37.52 3.33
3024 3837 3.357079 CCGCTGGACTGTGCCAAC 61.357 66.667 0.00 0.00 37.52 3.77
3141 3954 0.464373 CAGTCACAGCACACCCTGTT 60.464 55.000 0.00 0.00 43.19 3.16
3411 9730 1.222936 GACCCTGCAGATCACCCTG 59.777 63.158 17.39 0.00 37.23 4.45
3412 9731 1.997874 GGACCCTGCAGATCACCCT 60.998 63.158 17.39 0.00 0.00 4.34
3438 9775 3.990318 ACGATCTGATACGCTTCATGA 57.010 42.857 0.00 0.00 0.00 3.07
3481 9824 4.634199 CAATTTATTCATGGGGGCATGTC 58.366 43.478 0.00 0.00 34.39 3.06
3551 9895 1.004200 GCTTTTTCGGACGGAGGGA 60.004 57.895 0.00 0.00 0.00 4.20
3552 9896 1.003718 AGCTTTTTCGGACGGAGGG 60.004 57.895 0.00 0.00 0.00 4.30
3553 9897 0.037232 AGAGCTTTTTCGGACGGAGG 60.037 55.000 0.00 0.00 0.00 4.30
3554 9898 2.163815 TCTAGAGCTTTTTCGGACGGAG 59.836 50.000 0.00 0.00 0.00 4.63
3555 9899 2.165167 TCTAGAGCTTTTTCGGACGGA 58.835 47.619 0.00 0.00 0.00 4.69
3556 9900 2.649331 TCTAGAGCTTTTTCGGACGG 57.351 50.000 0.00 0.00 0.00 4.79
3557 9901 4.669318 TGTATCTAGAGCTTTTTCGGACG 58.331 43.478 0.00 0.00 0.00 4.79
3558 9902 5.692654 GGATGTATCTAGAGCTTTTTCGGAC 59.307 44.000 0.00 0.00 0.00 4.79
3559 9903 5.362717 TGGATGTATCTAGAGCTTTTTCGGA 59.637 40.000 0.00 0.00 0.00 4.55
3560 9904 5.601662 TGGATGTATCTAGAGCTTTTTCGG 58.398 41.667 0.00 0.00 0.00 4.30
3561 9905 7.721286 AATGGATGTATCTAGAGCTTTTTCG 57.279 36.000 0.00 0.00 0.00 3.46
3562 9906 9.113838 TCAAATGGATGTATCTAGAGCTTTTTC 57.886 33.333 0.00 0.00 0.00 2.29
3563 9907 9.118300 CTCAAATGGATGTATCTAGAGCTTTTT 57.882 33.333 0.00 0.00 0.00 1.94
3564 9908 7.718753 CCTCAAATGGATGTATCTAGAGCTTTT 59.281 37.037 0.00 0.00 0.00 2.27
3565 9909 7.222872 CCTCAAATGGATGTATCTAGAGCTTT 58.777 38.462 0.00 0.00 0.00 3.51
3566 9910 6.239829 CCCTCAAATGGATGTATCTAGAGCTT 60.240 42.308 0.00 0.00 0.00 3.74
3567 9911 5.248020 CCCTCAAATGGATGTATCTAGAGCT 59.752 44.000 0.00 0.00 0.00 4.09
3568 9912 5.247110 TCCCTCAAATGGATGTATCTAGAGC 59.753 44.000 0.00 0.00 0.00 4.09
3569 9913 6.268617 TGTCCCTCAAATGGATGTATCTAGAG 59.731 42.308 0.00 0.00 33.65 2.43
3570 9914 6.143206 TGTCCCTCAAATGGATGTATCTAGA 58.857 40.000 0.00 0.00 33.65 2.43
3571 9915 6.425210 TGTCCCTCAAATGGATGTATCTAG 57.575 41.667 0.00 0.00 33.65 2.43
3572 9916 6.688922 GCTTGTCCCTCAAATGGATGTATCTA 60.689 42.308 0.00 0.00 35.48 1.98
3573 9917 5.688807 CTTGTCCCTCAAATGGATGTATCT 58.311 41.667 0.00 0.00 35.48 1.98
3574 9918 4.276926 GCTTGTCCCTCAAATGGATGTATC 59.723 45.833 0.00 0.00 35.48 2.24
3575 9919 4.079558 AGCTTGTCCCTCAAATGGATGTAT 60.080 41.667 0.00 0.00 35.48 2.29
3576 9920 3.266772 AGCTTGTCCCTCAAATGGATGTA 59.733 43.478 0.00 0.00 35.48 2.29
3577 9921 2.042162 AGCTTGTCCCTCAAATGGATGT 59.958 45.455 0.00 0.00 35.48 3.06
3578 9922 2.731572 AGCTTGTCCCTCAAATGGATG 58.268 47.619 0.00 0.00 35.48 3.51
3579 9923 3.463048 AAGCTTGTCCCTCAAATGGAT 57.537 42.857 0.00 0.00 35.48 3.41
3580 9924 2.978156 AAGCTTGTCCCTCAAATGGA 57.022 45.000 0.00 0.00 35.48 3.41
3581 9925 4.309933 GAAAAAGCTTGTCCCTCAAATGG 58.690 43.478 0.00 0.00 35.48 3.16
3582 9926 3.983344 CGAAAAAGCTTGTCCCTCAAATG 59.017 43.478 0.00 0.00 35.48 2.32
3583 9927 3.005791 CCGAAAAAGCTTGTCCCTCAAAT 59.994 43.478 0.00 0.00 35.48 2.32
3584 9928 2.360801 CCGAAAAAGCTTGTCCCTCAAA 59.639 45.455 0.00 0.00 35.48 2.69
3585 9929 1.953686 CCGAAAAAGCTTGTCCCTCAA 59.046 47.619 0.00 0.00 34.61 3.02
3586 9930 1.142060 TCCGAAAAAGCTTGTCCCTCA 59.858 47.619 0.00 0.00 0.00 3.86
3587 9931 1.535896 GTCCGAAAAAGCTTGTCCCTC 59.464 52.381 0.00 0.00 0.00 4.30
3588 9932 1.605753 GTCCGAAAAAGCTTGTCCCT 58.394 50.000 0.00 0.00 0.00 4.20
3589 9933 0.237498 CGTCCGAAAAAGCTTGTCCC 59.763 55.000 0.00 0.00 0.00 4.46
3590 9934 0.237498 CCGTCCGAAAAAGCTTGTCC 59.763 55.000 0.00 0.00 0.00 4.02
3591 9935 1.194772 CTCCGTCCGAAAAAGCTTGTC 59.805 52.381 0.00 0.00 0.00 3.18
3592 9936 1.226746 CTCCGTCCGAAAAAGCTTGT 58.773 50.000 0.00 0.00 0.00 3.16
3593 9937 0.517316 CCTCCGTCCGAAAAAGCTTG 59.483 55.000 0.00 0.00 0.00 4.01
3594 9938 0.605589 CCCTCCGTCCGAAAAAGCTT 60.606 55.000 0.00 0.00 0.00 3.74
3595 9939 1.003718 CCCTCCGTCCGAAAAAGCT 60.004 57.895 0.00 0.00 0.00 3.74
3596 9940 1.004200 TCCCTCCGTCCGAAAAAGC 60.004 57.895 0.00 0.00 0.00 3.51
3597 9941 0.320697 ACTCCCTCCGTCCGAAAAAG 59.679 55.000 0.00 0.00 0.00 2.27
3598 9942 1.273327 GTACTCCCTCCGTCCGAAAAA 59.727 52.381 0.00 0.00 0.00 1.94
3599 9943 0.890683 GTACTCCCTCCGTCCGAAAA 59.109 55.000 0.00 0.00 0.00 2.29
3600 9944 0.251297 TGTACTCCCTCCGTCCGAAA 60.251 55.000 0.00 0.00 0.00 3.46
3601 9945 0.033796 ATGTACTCCCTCCGTCCGAA 60.034 55.000 0.00 0.00 0.00 4.30
3602 9946 0.839277 TATGTACTCCCTCCGTCCGA 59.161 55.000 0.00 0.00 0.00 4.55
3603 9947 1.906990 ATATGTACTCCCTCCGTCCG 58.093 55.000 0.00 0.00 0.00 4.79
3604 9948 3.387050 ACAAATATGTACTCCCTCCGTCC 59.613 47.826 0.00 0.00 38.24 4.79
3605 9949 4.098960 TCACAAATATGTACTCCCTCCGTC 59.901 45.833 0.00 0.00 37.82 4.79
3606 9950 4.028131 TCACAAATATGTACTCCCTCCGT 58.972 43.478 0.00 0.00 37.82 4.69
3607 9951 4.665833 TCACAAATATGTACTCCCTCCG 57.334 45.455 0.00 0.00 37.82 4.63
3608 9952 5.239525 GCATTCACAAATATGTACTCCCTCC 59.760 44.000 0.00 0.00 37.82 4.30
3609 9953 6.017605 CAGCATTCACAAATATGTACTCCCTC 60.018 42.308 0.00 0.00 37.82 4.30
3610 9954 5.824624 CAGCATTCACAAATATGTACTCCCT 59.175 40.000 0.00 0.00 37.82 4.20
3611 9955 5.822519 TCAGCATTCACAAATATGTACTCCC 59.177 40.000 0.00 0.00 37.82 4.30
3612 9956 6.925610 TCAGCATTCACAAATATGTACTCC 57.074 37.500 0.00 0.00 37.82 3.85
3613 9957 6.854892 GCATCAGCATTCACAAATATGTACTC 59.145 38.462 0.00 0.00 38.09 2.59
3614 9958 6.238842 GGCATCAGCATTCACAAATATGTACT 60.239 38.462 0.00 0.00 44.61 2.73
3615 9959 5.916883 GGCATCAGCATTCACAAATATGTAC 59.083 40.000 0.00 0.00 44.61 2.90
3616 9960 5.593502 TGGCATCAGCATTCACAAATATGTA 59.406 36.000 0.00 0.00 44.61 2.29
3617 9961 4.403113 TGGCATCAGCATTCACAAATATGT 59.597 37.500 0.00 0.00 44.61 2.29
3618 9962 4.939271 TGGCATCAGCATTCACAAATATG 58.061 39.130 0.00 0.00 44.61 1.78
3699 14448 7.134815 ACTTCAAAACTCTGAACAAATGATCG 58.865 34.615 0.00 0.00 32.00 3.69
3893 14642 1.604308 CAAGCACATGCCACCCAGA 60.604 57.895 0.00 0.00 43.38 3.86
3927 14677 6.322456 CAGTTGAGGAATAGACAGAGGATGTA 59.678 42.308 0.00 0.00 44.17 2.29
4030 14802 6.069673 TCACCCACTAGTCAATATTCCAACAT 60.070 38.462 0.00 0.00 0.00 2.71
4111 14945 4.025730 CAGGTAGCAACGTAATACTGCATG 60.026 45.833 11.43 4.16 38.58 4.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.