Multiple sequence alignment - TraesCS3B01G508400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G508400 chr3B 100.000 3861 0 0 1 3861 752272623 752276483 0.000000e+00 7131.0
1 TraesCS3B01G508400 chr3B 81.910 398 66 5 1505 1899 755437128 755437522 8.000000e-87 331.0
2 TraesCS3B01G508400 chr3B 77.072 362 74 7 1615 1976 801163820 801164172 2.350000e-47 200.0
3 TraesCS3B01G508400 chr3B 78.125 192 37 3 2909 3095 754947435 754947244 2.440000e-22 117.0
4 TraesCS3B01G508400 chr3B 77.184 206 38 8 2931 3131 658465584 658465785 1.130000e-20 111.0
5 TraesCS3B01G508400 chr3A 88.297 2290 193 42 793 3055 699417356 699419597 0.000000e+00 2675.0
6 TraesCS3B01G508400 chr3A 81.395 1462 236 18 1349 2798 699468512 699467075 0.000000e+00 1160.0
7 TraesCS3B01G508400 chr3A 77.881 1189 198 37 1653 2808 700746331 700747487 0.000000e+00 678.0
8 TraesCS3B01G508400 chr3A 84.839 620 65 15 2 617 699415082 699415676 7.140000e-167 597.0
9 TraesCS3B01G508400 chr3A 76.019 417 87 12 1598 2009 698353034 698352626 1.820000e-48 204.0
10 TraesCS3B01G508400 chr3A 79.024 205 35 8 2931 3130 636565457 636565256 2.420000e-27 134.0
11 TraesCS3B01G508400 chr3A 72.846 383 100 4 1638 2019 628633475 628633096 1.130000e-25 128.0
12 TraesCS3B01G508400 chr3A 77.778 198 36 7 2931 3123 636564213 636564019 8.770000e-22 115.0
13 TraesCS3B01G508400 chr3A 91.176 68 5 1 708 774 699416145 699416212 1.480000e-14 91.6
14 TraesCS3B01G508400 chr3D 91.953 1715 128 8 1427 3135 564639736 564641446 0.000000e+00 2394.0
15 TraesCS3B01G508400 chr3D 81.601 1462 233 18 1349 2798 564910027 564908590 0.000000e+00 1177.0
16 TraesCS3B01G508400 chr3D 89.046 776 72 10 2 774 564638318 564639083 0.000000e+00 950.0
17 TraesCS3B01G508400 chr3D 77.671 1245 226 33 1505 2727 566549617 566550831 0.000000e+00 712.0
18 TraesCS3B01G508400 chr3D 85.179 614 52 28 793 1396 564639155 564639739 9.240000e-166 593.0
19 TraesCS3B01G508400 chr3D 87.257 463 43 6 3401 3861 564657731 564658179 7.400000e-142 514.0
20 TraesCS3B01G508400 chr3D 80.788 203 36 3 2931 3131 497862088 497862289 5.160000e-34 156.0
21 TraesCS3B01G508400 chr3D 92.708 96 7 0 2973 3068 564657544 564657639 5.200000e-29 139.0
22 TraesCS3B01G508400 chr3D 94.444 72 4 0 3405 3476 564641452 564641523 1.130000e-20 111.0
23 TraesCS3B01G508400 chr3D 77.358 159 23 8 2906 3055 567302365 567302519 8.890000e-12 82.4
24 TraesCS3B01G508400 chr3D 100.000 34 0 0 2934 2967 520608650 520608617 3.220000e-06 63.9
25 TraesCS3B01G508400 chr7D 97.807 228 5 0 3178 3405 553380209 553379982 1.010000e-105 394.0
26 TraesCS3B01G508400 chr7D 95.964 223 9 0 3178 3400 553373673 553373451 2.840000e-96 363.0
27 TraesCS3B01G508400 chr2B 97.788 226 5 0 3178 3403 93714892 93714667 1.300000e-104 390.0
28 TraesCS3B01G508400 chr2B 96.491 228 8 0 3178 3405 93720936 93720709 1.010000e-100 377.0
29 TraesCS3B01G508400 chr2B 96.491 228 8 0 3178 3405 93731251 93731024 1.010000e-100 377.0
30 TraesCS3B01G508400 chr1D 90.708 226 3 7 3177 3402 73690939 73691146 6.310000e-73 285.0
31 TraesCS3B01G508400 chr1D 90.667 225 3 2 3178 3402 73710698 73710904 2.270000e-72 283.0
32 TraesCS3B01G508400 chr1A 81.731 208 30 7 32 231 539278150 539278357 2.390000e-37 167.0
33 TraesCS3B01G508400 chr5B 89.922 129 9 4 32 157 6955533 6955406 3.090000e-36 163.0
34 TraesCS3B01G508400 chr5D 83.051 118 12 7 46 156 84181261 84181377 2.450000e-17 100.0
35 TraesCS3B01G508400 chr5A 80.469 128 18 6 34 156 78477495 78477620 1.480000e-14 91.6
36 TraesCS3B01G508400 chr4B 97.059 34 1 0 3228 3261 481852135 481852102 1.500000e-04 58.4
37 TraesCS3B01G508400 chr4B 97.059 34 1 0 3228 3261 481859125 481859092 1.500000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G508400 chr3B 752272623 752276483 3860 False 7131.0 7131 100.0000 1 3861 1 chr3B.!!$F2 3860
1 TraesCS3B01G508400 chr3A 699467075 699468512 1437 True 1160.0 1160 81.3950 1349 2798 1 chr3A.!!$R3 1449
2 TraesCS3B01G508400 chr3A 699415082 699419597 4515 False 1121.2 2675 88.1040 2 3055 3 chr3A.!!$F2 3053
3 TraesCS3B01G508400 chr3A 700746331 700747487 1156 False 678.0 678 77.8810 1653 2808 1 chr3A.!!$F1 1155
4 TraesCS3B01G508400 chr3D 564908590 564910027 1437 True 1177.0 1177 81.6010 1349 2798 1 chr3D.!!$R2 1449
5 TraesCS3B01G508400 chr3D 564638318 564641523 3205 False 1012.0 2394 90.1555 2 3476 4 chr3D.!!$F4 3474
6 TraesCS3B01G508400 chr3D 566549617 566550831 1214 False 712.0 712 77.6710 1505 2727 1 chr3D.!!$F2 1222
7 TraesCS3B01G508400 chr3D 564657544 564658179 635 False 326.5 514 89.9825 2973 3861 2 chr3D.!!$F5 888

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
196 199 0.462937 TTAATCGTGGATGCACCGGG 60.463 55.0 12.15 0.0 42.61 5.73 F
789 1184 0.613777 ACCTGTAAGCGGAAAGAGGG 59.386 55.0 0.00 0.0 30.50 4.30 F
1282 2843 0.106521 GGGAGAGCAGAGAGGATTGC 59.893 60.0 0.00 0.0 40.57 3.56 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1099 2627 0.034477 TCTTTTTCCAGATCGGGGGC 60.034 55.0 12.28 0.0 34.36 5.80 R
2058 3627 0.250467 TTGGAGAGCAAGGTGAGCAC 60.250 55.0 0.00 0.0 0.00 4.40 R
3278 4891 0.035317 AGGCGCTTGTTCAGTGATCA 59.965 50.0 7.64 0.0 34.56 2.92 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 2.866156 CGAAATAGAAATGGCGCTCTCA 59.134 45.455 7.64 0.00 0.00 3.27
89 92 5.047590 TGCAAAGCTCATGAATGTCATTTCT 60.048 36.000 0.00 0.00 34.28 2.52
149 152 7.986320 TCAAAATCACATCCACAAAATTTCAGT 59.014 29.630 0.00 0.00 0.00 3.41
187 190 9.535878 AAATTTTGCTAAGTTTTTAATCGTGGA 57.464 25.926 0.00 0.00 0.00 4.02
193 196 4.434713 AGTTTTTAATCGTGGATGCACC 57.565 40.909 12.15 0.00 39.54 5.01
196 199 0.462937 TTAATCGTGGATGCACCGGG 60.463 55.000 12.15 0.00 42.61 5.73
213 216 2.676471 GGGCGCAATGTCCAAGGT 60.676 61.111 10.83 0.00 44.04 3.50
214 217 2.568090 GGCGCAATGTCCAAGGTG 59.432 61.111 10.83 0.00 0.00 4.00
215 218 2.268076 GGCGCAATGTCCAAGGTGT 61.268 57.895 10.83 0.00 0.00 4.16
220 223 3.797184 GCGCAATGTCCAAGGTGTAAAAA 60.797 43.478 0.30 0.00 0.00 1.94
241 258 1.660575 ACACTCTTTCGGCGACACG 60.661 57.895 10.16 0.26 0.00 4.49
243 260 0.732880 CACTCTTTCGGCGACACGAT 60.733 55.000 10.16 0.00 43.11 3.73
244 261 0.732880 ACTCTTTCGGCGACACGATG 60.733 55.000 10.16 0.00 43.11 3.84
252 269 3.545481 CGACACGATGCCAGCGAC 61.545 66.667 10.27 0.00 0.00 5.19
299 316 2.167861 GGTTCTGATGGTCGCGCTC 61.168 63.158 5.56 0.00 0.00 5.03
315 332 1.467920 GCTCCTGCCAGCAATAACTT 58.532 50.000 0.00 0.00 39.43 2.66
324 341 1.131126 CAGCAATAACTTCGGTGGCTG 59.869 52.381 0.00 0.00 40.88 4.85
375 392 4.470170 CATCACGGGCGTCGACGA 62.470 66.667 39.74 19.42 43.02 4.20
388 405 2.264794 GACGATCCGGCCAACAGT 59.735 61.111 2.24 0.00 0.00 3.55
401 418 0.944311 CAACAGTCGAACCGGTGGAG 60.944 60.000 8.52 2.25 0.00 3.86
431 448 3.063084 GACGAGACCTCCAGCGGT 61.063 66.667 0.00 0.00 40.80 5.68
496 513 1.821136 GAAGGCTTCCTGGGTGAAATG 59.179 52.381 16.50 0.00 32.13 2.32
550 567 3.864686 CGCGGGAATGTTCAGCGG 61.865 66.667 19.70 7.77 45.36 5.52
638 655 5.883673 TGTATCACCAAGTGCCCTATTTTAC 59.116 40.000 0.00 0.00 32.98 2.01
652 669 7.040340 TGCCCTATTTTACATCGTGAAGAAAAA 60.040 33.333 0.00 0.00 0.00 1.94
654 671 9.855021 CCCTATTTTACATCGTGAAGAAAAATT 57.145 29.630 0.00 0.00 31.21 1.82
711 1106 3.347216 TGGAGCAGCATTTTTAGGTCTC 58.653 45.455 0.00 0.00 0.00 3.36
713 1108 2.352960 GAGCAGCATTTTTAGGTCTCCG 59.647 50.000 0.00 0.00 0.00 4.63
774 1169 9.834628 TTATAATGCTTTTAAAACGAGAACCTG 57.165 29.630 0.00 0.00 0.00 4.00
777 1172 6.680874 TGCTTTTAAAACGAGAACCTGTAA 57.319 33.333 0.00 0.00 0.00 2.41
778 1173 6.721321 TGCTTTTAAAACGAGAACCTGTAAG 58.279 36.000 0.00 0.00 0.00 2.34
779 1174 5.624081 GCTTTTAAAACGAGAACCTGTAAGC 59.376 40.000 0.00 0.00 0.00 3.09
780 1175 4.977741 TTAAAACGAGAACCTGTAAGCG 57.022 40.909 0.00 0.00 0.00 4.68
781 1176 1.792006 AAACGAGAACCTGTAAGCGG 58.208 50.000 0.00 0.00 0.00 5.52
782 1177 0.963962 AACGAGAACCTGTAAGCGGA 59.036 50.000 0.00 0.00 0.00 5.54
783 1178 0.963962 ACGAGAACCTGTAAGCGGAA 59.036 50.000 0.00 0.00 0.00 4.30
787 1182 3.254892 GAGAACCTGTAAGCGGAAAGAG 58.745 50.000 0.00 0.00 0.00 2.85
789 1184 0.613777 ACCTGTAAGCGGAAAGAGGG 59.386 55.000 0.00 0.00 30.50 4.30
790 1185 0.902531 CCTGTAAGCGGAAAGAGGGA 59.097 55.000 0.00 0.00 0.00 4.20
791 1186 1.134670 CCTGTAAGCGGAAAGAGGGAG 60.135 57.143 0.00 0.00 0.00 4.30
797 2321 4.875561 AAGCGGAAAGAGGGAGTATATC 57.124 45.455 0.00 0.00 0.00 1.63
834 2358 4.415150 CCATCCCCTGTGCGTGCT 62.415 66.667 0.00 0.00 0.00 4.40
982 2510 4.443266 GGCTGCGTCTTCGGCTCT 62.443 66.667 0.00 0.00 37.56 4.09
1117 2645 1.376609 CGCCCCCGATCTGGAAAAAG 61.377 60.000 4.46 0.00 42.00 2.27
1167 2695 4.477975 CGAGGTGTCCCGCTCGAC 62.478 72.222 0.00 0.00 41.24 4.20
1193 2722 3.792736 CGGCGGATTGGGGGAGAA 61.793 66.667 0.00 0.00 0.00 2.87
1195 2724 2.375345 GGCGGATTGGGGGAGAAGA 61.375 63.158 0.00 0.00 0.00 2.87
1197 2726 0.250510 GCGGATTGGGGGAGAAGATC 60.251 60.000 0.00 0.00 0.00 2.75
1198 2727 1.428869 CGGATTGGGGGAGAAGATCT 58.571 55.000 0.00 0.00 0.00 2.75
1215 2770 2.875102 TCTGAAGATGGATCAGGGGA 57.125 50.000 3.92 0.00 43.58 4.81
1216 2771 2.402564 TCTGAAGATGGATCAGGGGAC 58.597 52.381 3.92 0.00 43.58 4.46
1217 2772 2.022625 TCTGAAGATGGATCAGGGGACT 60.023 50.000 3.92 0.00 43.58 3.85
1218 2773 3.207549 TCTGAAGATGGATCAGGGGACTA 59.792 47.826 3.92 0.00 43.58 2.59
1219 2774 3.577848 CTGAAGATGGATCAGGGGACTAG 59.422 52.174 0.00 0.00 40.48 2.57
1259 2820 0.752054 CATGAGAGAGCAGAGGGGAC 59.248 60.000 0.00 0.00 0.00 4.46
1261 2822 1.299939 TGAGAGAGCAGAGGGGACTA 58.700 55.000 0.00 0.00 44.43 2.59
1262 2823 1.214175 TGAGAGAGCAGAGGGGACTAG 59.786 57.143 0.00 0.00 44.43 2.57
1264 2825 0.469144 GAGAGCAGAGGGGACTAGGG 60.469 65.000 0.00 0.00 44.43 3.53
1266 2827 1.941820 AGCAGAGGGGACTAGGGGA 60.942 63.158 0.00 0.00 44.43 4.81
1267 2828 1.458588 GCAGAGGGGACTAGGGGAG 60.459 68.421 0.00 0.00 44.43 4.30
1268 2829 1.950748 GCAGAGGGGACTAGGGGAGA 61.951 65.000 0.00 0.00 44.43 3.71
1269 2830 0.187361 CAGAGGGGACTAGGGGAGAG 59.813 65.000 0.00 0.00 44.43 3.20
1270 2831 1.152419 GAGGGGACTAGGGGAGAGC 60.152 68.421 0.00 0.00 44.43 4.09
1272 2833 1.458588 GGGGACTAGGGGAGAGCAG 60.459 68.421 0.00 0.00 0.00 4.24
1273 2834 1.621377 GGGACTAGGGGAGAGCAGA 59.379 63.158 0.00 0.00 0.00 4.26
1274 2835 0.469144 GGGACTAGGGGAGAGCAGAG 60.469 65.000 0.00 0.00 0.00 3.35
1275 2836 0.553819 GGACTAGGGGAGAGCAGAGA 59.446 60.000 0.00 0.00 0.00 3.10
1276 2837 1.478654 GGACTAGGGGAGAGCAGAGAG 60.479 61.905 0.00 0.00 0.00 3.20
1277 2838 0.555769 ACTAGGGGAGAGCAGAGAGG 59.444 60.000 0.00 0.00 0.00 3.69
1278 2839 0.850100 CTAGGGGAGAGCAGAGAGGA 59.150 60.000 0.00 0.00 0.00 3.71
1279 2840 1.428912 CTAGGGGAGAGCAGAGAGGAT 59.571 57.143 0.00 0.00 0.00 3.24
1280 2841 0.641601 AGGGGAGAGCAGAGAGGATT 59.358 55.000 0.00 0.00 0.00 3.01
1281 2842 0.758123 GGGGAGAGCAGAGAGGATTG 59.242 60.000 0.00 0.00 0.00 2.67
1282 2843 0.106521 GGGAGAGCAGAGAGGATTGC 59.893 60.000 0.00 0.00 40.57 3.56
1283 2844 0.106521 GGAGAGCAGAGAGGATTGCC 59.893 60.000 0.00 0.00 41.17 4.52
1305 2866 5.744300 GCCTGCTGTAAATATGAGGATCTGT 60.744 44.000 0.00 0.00 34.92 3.41
1347 2908 0.249155 TGCTGCTTGCTTTGCTTGAC 60.249 50.000 0.00 0.00 43.37 3.18
1396 2957 3.940209 TCTTGGTGATCAATTGTTGCC 57.060 42.857 5.13 4.96 34.45 4.52
1398 2959 3.833650 TCTTGGTGATCAATTGTTGCCAT 59.166 39.130 5.13 0.00 34.45 4.40
1401 2962 4.970711 TGGTGATCAATTGTTGCCATTTT 58.029 34.783 5.13 0.00 0.00 1.82
1459 3022 2.527497 TGGAGCATTGGATTCTGCAAA 58.473 42.857 0.00 0.00 40.88 3.68
1464 3027 2.733227 GCATTGGATTCTGCAAAGGACG 60.733 50.000 0.00 0.00 38.28 4.79
1465 3028 1.533625 TTGGATTCTGCAAAGGACGG 58.466 50.000 0.00 0.00 0.00 4.79
1466 3029 0.690192 TGGATTCTGCAAAGGACGGA 59.310 50.000 0.00 0.00 0.00 4.69
1526 3089 2.754658 GCAGCAATGGCAGCCTCT 60.755 61.111 14.15 1.55 45.79 3.69
1543 3106 0.541998 TCTCCGGCTGAAGTTCTCCA 60.542 55.000 4.17 0.00 0.00 3.86
1817 3383 1.887198 GACGAGGTCTTTCAGAGTGGA 59.113 52.381 0.00 0.00 0.00 4.02
1865 3431 1.376683 CGGCCGAATCCTCCACAAA 60.377 57.895 24.07 0.00 0.00 2.83
1901 3467 5.929992 GCTCTCTGACTACTATATCGTCACT 59.070 44.000 0.00 0.00 34.32 3.41
1931 3497 2.347490 GGCTTCTTCGTCCTGGCA 59.653 61.111 0.00 0.00 0.00 4.92
2023 3592 2.409055 TGCCGCCTGATGTGAATGC 61.409 57.895 0.00 0.00 0.00 3.56
2025 3594 2.484062 CCGCCTGATGTGAATGCCC 61.484 63.158 0.00 0.00 0.00 5.36
2044 3613 1.580845 CCCTGTTCGCTCTGCTTTGG 61.581 60.000 0.00 0.00 0.00 3.28
2157 3744 8.306313 TGAGCTTTCACTCTATGGTCTTATTA 57.694 34.615 0.00 0.00 37.58 0.98
2163 3750 5.775701 TCACTCTATGGTCTTATTAGGAGGC 59.224 44.000 0.00 0.00 0.00 4.70
2164 3751 5.540337 CACTCTATGGTCTTATTAGGAGGCA 59.460 44.000 0.00 0.00 0.00 4.75
2221 3808 4.717877 TCAGCAAGAAACTTGGAATCAGA 58.282 39.130 12.36 0.00 0.00 3.27
2233 3820 1.734465 GGAATCAGACGAAACAGCTGG 59.266 52.381 19.93 1.96 0.00 4.85
2234 3821 1.129437 GAATCAGACGAAACAGCTGGC 59.871 52.381 19.93 6.04 0.00 4.85
2238 3825 2.954753 GACGAAACAGCTGGCGTGG 61.955 63.158 27.90 13.26 37.07 4.94
2239 3826 2.972505 CGAAACAGCTGGCGTGGT 60.973 61.111 19.93 0.00 0.00 4.16
2243 3830 1.724582 AAACAGCTGGCGTGGTTGTC 61.725 55.000 19.93 0.00 0.00 3.18
2368 3960 3.304911 TGGATTTTGGTGGACAACTGA 57.695 42.857 0.00 0.00 39.19 3.41
2556 4151 5.362105 ACTACACTGAACAACTGGGTTTA 57.638 39.130 0.00 0.00 35.72 2.01
2568 4163 5.128171 ACAACTGGGTTTATCTGCTCGTATA 59.872 40.000 0.00 0.00 0.00 1.47
2637 4232 3.057315 CCGTTGATTTTGTGAAGCAGGAT 60.057 43.478 0.00 0.00 0.00 3.24
2672 4267 4.507879 CGGCGACCGTCCTTTAAT 57.492 55.556 0.00 0.00 42.73 1.40
2703 4298 3.861840 GCTTCTGTCAAGCTACACCATA 58.138 45.455 0.00 0.00 40.01 2.74
2706 4301 5.355350 GCTTCTGTCAAGCTACACCATAAAT 59.645 40.000 0.00 0.00 40.01 1.40
2740 4335 0.176680 ACTGGCCTTACAGCAGATCG 59.823 55.000 3.32 0.00 42.21 3.69
2798 4404 4.202141 TGGTATGCATTGCTAAGAAATGGC 60.202 41.667 3.54 0.00 35.88 4.40
2799 4405 4.202141 GGTATGCATTGCTAAGAAATGGCA 60.202 41.667 3.54 0.00 44.64 4.92
2812 4418 5.806654 AGAAATGGCACCTGTTTTGTTAT 57.193 34.783 0.00 0.00 0.00 1.89
2824 4430 6.764085 ACCTGTTTTGTTATTTTGGTTAAGCC 59.236 34.615 1.51 0.00 37.90 4.35
2827 4433 8.794335 TGTTTTGTTATTTTGGTTAAGCCTTT 57.206 26.923 1.51 0.00 38.35 3.11
2828 4434 8.669243 TGTTTTGTTATTTTGGTTAAGCCTTTG 58.331 29.630 1.51 0.00 38.35 2.77
2832 4438 8.426881 TGTTATTTTGGTTAAGCCTTTGTTTC 57.573 30.769 1.51 0.00 38.35 2.78
2855 4461 0.168128 CGGGCAAGAAACGGATTGAC 59.832 55.000 0.00 0.00 33.45 3.18
2859 4465 2.814336 GGCAAGAAACGGATTGACTCTT 59.186 45.455 0.00 0.00 31.42 2.85
2863 4469 5.238583 CAAGAAACGGATTGACTCTTAGGT 58.761 41.667 0.00 0.00 0.00 3.08
2869 4475 7.414222 AACGGATTGACTCTTAGGTTGTATA 57.586 36.000 0.00 0.00 0.00 1.47
2918 4524 5.091552 ACCTTATGTCCTCCACTGTTTAGA 58.908 41.667 0.00 0.00 0.00 2.10
2929 4539 6.203723 CCTCCACTGTTTAGATTTATGCTAGC 59.796 42.308 8.10 8.10 0.00 3.42
3055 4665 9.638176 ATGCCTCATTGTTCTCTATAATCTTTT 57.362 29.630 0.00 0.00 0.00 2.27
3083 4693 9.477484 AGTATTACAATATTTTCGTCTAGGCAG 57.523 33.333 0.00 0.00 0.00 4.85
3102 4712 9.178758 CTAGGCAGGAAACAAGTTTTAGATATT 57.821 33.333 0.00 0.00 32.11 1.28
3126 4736 3.876309 ACCAGTGGTTTGTGGAACTAT 57.124 42.857 9.70 0.00 38.35 2.12
3135 4745 6.205853 GTGGTTTGTGGAACTATTGTATGTCA 59.794 38.462 0.00 0.00 38.35 3.58
3138 4748 7.174253 GGTTTGTGGAACTATTGTATGTCAAGA 59.826 37.037 0.00 0.00 37.64 3.02
3142 4752 6.313905 GTGGAACTATTGTATGTCAAGACCAG 59.686 42.308 0.00 0.00 39.55 4.00
3145 4755 5.030147 ACTATTGTATGTCAAGACCAGGGA 58.970 41.667 0.00 0.00 39.55 4.20
3156 4766 2.269241 CCAGGGAGGGCTTCGAAC 59.731 66.667 0.00 0.00 0.00 3.95
3162 4772 1.002773 GGGAGGGCTTCGAACAAAGTA 59.997 52.381 0.00 0.00 0.00 2.24
3175 4788 7.915293 TCGAACAAAGTATGATATGGTGTTT 57.085 32.000 0.00 0.00 0.00 2.83
3176 4789 7.970384 TCGAACAAAGTATGATATGGTGTTTC 58.030 34.615 0.00 0.00 0.00 2.78
3177 4790 7.822334 TCGAACAAAGTATGATATGGTGTTTCT 59.178 33.333 0.00 0.00 0.00 2.52
3178 4791 7.904977 CGAACAAAGTATGATATGGTGTTTCTG 59.095 37.037 0.00 0.00 0.00 3.02
3179 4792 8.635765 AACAAAGTATGATATGGTGTTTCTGT 57.364 30.769 0.00 0.00 0.00 3.41
3180 4793 8.635765 ACAAAGTATGATATGGTGTTTCTGTT 57.364 30.769 0.00 0.00 0.00 3.16
3181 4794 9.733556 ACAAAGTATGATATGGTGTTTCTGTTA 57.266 29.630 0.00 0.00 0.00 2.41
3220 4833 3.637911 AATAGACGGTTTGTATGCCCA 57.362 42.857 0.00 0.00 0.00 5.36
3221 4834 3.637911 ATAGACGGTTTGTATGCCCAA 57.362 42.857 0.00 0.00 0.00 4.12
3222 4835 2.279935 AGACGGTTTGTATGCCCAAA 57.720 45.000 0.00 0.00 32.12 3.28
3223 4836 2.159382 AGACGGTTTGTATGCCCAAAG 58.841 47.619 0.00 0.00 35.13 2.77
3224 4837 0.601057 ACGGTTTGTATGCCCAAAGC 59.399 50.000 10.84 10.84 44.99 3.51
3234 4847 4.745751 CCCAAAGCGCCGTACGGA 62.746 66.667 37.62 0.00 43.93 4.69
3235 4848 3.484547 CCAAAGCGCCGTACGGAC 61.485 66.667 37.62 26.63 43.93 4.79
3244 4857 3.370131 CGTACGGACGCATGTGTC 58.630 61.111 27.60 27.60 43.21 3.67
3250 4863 3.370131 GACGCATGTGTCCGTACG 58.630 61.111 25.74 8.69 37.87 3.67
3251 4864 2.126228 ACGCATGTGTCCGTACGG 60.126 61.111 28.66 28.66 35.69 4.02
3252 4865 2.179767 CGCATGTGTCCGTACGGA 59.820 61.111 32.61 32.61 42.90 4.69
3262 4875 2.872557 CGTACGGACGCCTTCTCA 59.127 61.111 7.51 0.00 43.21 3.27
3263 4876 1.432251 CGTACGGACGCCTTCTCAT 59.568 57.895 7.51 0.00 43.21 2.90
3264 4877 0.179145 CGTACGGACGCCTTCTCATT 60.179 55.000 7.51 0.00 43.21 2.57
3265 4878 1.278238 GTACGGACGCCTTCTCATTG 58.722 55.000 0.00 0.00 0.00 2.82
3266 4879 0.892755 TACGGACGCCTTCTCATTGT 59.107 50.000 0.00 0.00 0.00 2.71
3267 4880 0.892755 ACGGACGCCTTCTCATTGTA 59.107 50.000 0.00 0.00 0.00 2.41
3268 4881 1.278238 CGGACGCCTTCTCATTGTAC 58.722 55.000 0.00 0.00 0.00 2.90
3269 4882 1.403647 CGGACGCCTTCTCATTGTACA 60.404 52.381 0.00 0.00 0.00 2.90
3270 4883 2.271800 GGACGCCTTCTCATTGTACAG 58.728 52.381 0.00 0.00 0.00 2.74
3271 4884 2.094182 GGACGCCTTCTCATTGTACAGA 60.094 50.000 0.00 0.00 0.00 3.41
3272 4885 2.924290 GACGCCTTCTCATTGTACAGAC 59.076 50.000 0.00 0.00 0.00 3.51
3273 4886 1.920574 CGCCTTCTCATTGTACAGACG 59.079 52.381 0.00 0.00 0.00 4.18
3274 4887 1.661112 GCCTTCTCATTGTACAGACGC 59.339 52.381 0.00 0.00 0.00 5.19
3275 4888 2.271800 CCTTCTCATTGTACAGACGCC 58.728 52.381 0.00 0.00 0.00 5.68
3276 4889 2.093973 CCTTCTCATTGTACAGACGCCT 60.094 50.000 0.00 0.00 0.00 5.52
3277 4890 2.654749 TCTCATTGTACAGACGCCTG 57.345 50.000 0.00 0.00 45.76 4.85
3286 4899 2.746997 CAGACGCCTGTGATCACTG 58.253 57.895 25.55 23.74 35.70 3.66
3287 4900 0.244721 CAGACGCCTGTGATCACTGA 59.755 55.000 28.47 9.70 35.70 3.41
3288 4901 0.969149 AGACGCCTGTGATCACTGAA 59.031 50.000 28.47 9.00 32.81 3.02
3289 4902 1.071605 GACGCCTGTGATCACTGAAC 58.928 55.000 28.47 19.86 32.81 3.18
3290 4903 0.392706 ACGCCTGTGATCACTGAACA 59.607 50.000 28.47 8.36 32.81 3.18
3291 4904 1.202639 ACGCCTGTGATCACTGAACAA 60.203 47.619 28.47 7.61 32.81 2.83
3292 4905 1.462283 CGCCTGTGATCACTGAACAAG 59.538 52.381 28.47 15.87 32.81 3.16
3293 4906 1.198637 GCCTGTGATCACTGAACAAGC 59.801 52.381 28.47 20.02 32.81 4.01
3294 4907 1.462283 CCTGTGATCACTGAACAAGCG 59.538 52.381 28.47 10.45 32.81 4.68
3295 4908 0.867746 TGTGATCACTGAACAAGCGC 59.132 50.000 25.55 0.00 0.00 5.92
3296 4909 0.166814 GTGATCACTGAACAAGCGCC 59.833 55.000 18.83 0.00 0.00 6.53
3297 4910 0.035317 TGATCACTGAACAAGCGCCT 59.965 50.000 2.29 0.00 0.00 5.52
3298 4911 1.160137 GATCACTGAACAAGCGCCTT 58.840 50.000 2.29 0.00 0.00 4.35
3299 4912 1.129437 GATCACTGAACAAGCGCCTTC 59.871 52.381 2.29 3.18 0.00 3.46
3300 4913 0.106708 TCACTGAACAAGCGCCTTCT 59.893 50.000 2.29 0.00 0.00 2.85
3301 4914 0.514691 CACTGAACAAGCGCCTTCTC 59.485 55.000 2.29 0.00 0.00 2.87
3302 4915 0.603975 ACTGAACAAGCGCCTTCTCC 60.604 55.000 2.29 0.00 0.00 3.71
3303 4916 0.321122 CTGAACAAGCGCCTTCTCCT 60.321 55.000 2.29 0.00 0.00 3.69
3304 4917 0.108585 TGAACAAGCGCCTTCTCCTT 59.891 50.000 2.29 0.00 0.00 3.36
3305 4918 0.519077 GAACAAGCGCCTTCTCCTTG 59.481 55.000 2.29 2.21 41.20 3.61
3306 4919 1.451936 ACAAGCGCCTTCTCCTTGT 59.548 52.632 2.29 2.98 42.99 3.16
3307 4920 0.685097 ACAAGCGCCTTCTCCTTGTA 59.315 50.000 2.29 0.00 45.14 2.41
3308 4921 1.071699 ACAAGCGCCTTCTCCTTGTAA 59.928 47.619 2.29 0.00 45.14 2.41
3309 4922 1.464997 CAAGCGCCTTCTCCTTGTAAC 59.535 52.381 2.29 0.00 33.17 2.50
3310 4923 0.036294 AGCGCCTTCTCCTTGTAACC 60.036 55.000 2.29 0.00 0.00 2.85
3311 4924 1.359459 GCGCCTTCTCCTTGTAACCG 61.359 60.000 0.00 0.00 0.00 4.44
3312 4925 0.245539 CGCCTTCTCCTTGTAACCGA 59.754 55.000 0.00 0.00 0.00 4.69
3313 4926 1.723220 GCCTTCTCCTTGTAACCGAC 58.277 55.000 0.00 0.00 0.00 4.79
3314 4927 1.275573 GCCTTCTCCTTGTAACCGACT 59.724 52.381 0.00 0.00 0.00 4.18
3315 4928 2.289506 GCCTTCTCCTTGTAACCGACTT 60.290 50.000 0.00 0.00 0.00 3.01
3316 4929 3.806157 GCCTTCTCCTTGTAACCGACTTT 60.806 47.826 0.00 0.00 0.00 2.66
3317 4930 3.746492 CCTTCTCCTTGTAACCGACTTTG 59.254 47.826 0.00 0.00 0.00 2.77
3318 4931 2.762745 TCTCCTTGTAACCGACTTTGC 58.237 47.619 0.00 0.00 0.00 3.68
3319 4932 1.804748 CTCCTTGTAACCGACTTTGCC 59.195 52.381 0.00 0.00 0.00 4.52
3320 4933 1.141254 TCCTTGTAACCGACTTTGCCA 59.859 47.619 0.00 0.00 0.00 4.92
3321 4934 1.950909 CCTTGTAACCGACTTTGCCAA 59.049 47.619 0.00 0.00 0.00 4.52
3322 4935 2.031157 CCTTGTAACCGACTTTGCCAAG 60.031 50.000 0.00 0.00 35.92 3.61
3323 4936 2.623878 TGTAACCGACTTTGCCAAGA 57.376 45.000 4.25 0.00 33.72 3.02
3324 4937 2.489971 TGTAACCGACTTTGCCAAGAG 58.510 47.619 4.25 0.00 33.72 2.85
3325 4938 2.103432 TGTAACCGACTTTGCCAAGAGA 59.897 45.455 4.25 0.00 33.72 3.10
3326 4939 1.594331 AACCGACTTTGCCAAGAGAC 58.406 50.000 4.25 0.00 33.72 3.36
3327 4940 0.600255 ACCGACTTTGCCAAGAGACG 60.600 55.000 4.25 6.97 33.72 4.18
3328 4941 1.493311 CGACTTTGCCAAGAGACGC 59.507 57.895 4.25 0.00 33.72 5.19
3329 4942 1.221466 CGACTTTGCCAAGAGACGCA 61.221 55.000 4.25 0.00 33.72 5.24
3330 4943 0.944386 GACTTTGCCAAGAGACGCAA 59.056 50.000 4.25 0.00 42.99 4.85
3333 4946 0.030638 TTTGCCAAGAGACGCAAAGC 59.969 50.000 3.24 0.00 46.93 3.51
3334 4947 1.795170 TTGCCAAGAGACGCAAAGCC 61.795 55.000 0.00 0.00 41.80 4.35
3335 4948 1.968540 GCCAAGAGACGCAAAGCCT 60.969 57.895 0.00 0.00 0.00 4.58
3336 4949 1.518903 GCCAAGAGACGCAAAGCCTT 61.519 55.000 0.00 0.00 0.00 4.35
3337 4950 0.239347 CCAAGAGACGCAAAGCCTTG 59.761 55.000 0.00 0.00 35.33 3.61
3338 4951 0.947244 CAAGAGACGCAAAGCCTTGT 59.053 50.000 0.00 0.00 34.79 3.16
3339 4952 2.143122 CAAGAGACGCAAAGCCTTGTA 58.857 47.619 0.00 0.00 34.79 2.41
3340 4953 2.744202 CAAGAGACGCAAAGCCTTGTAT 59.256 45.455 0.00 0.00 34.79 2.29
3341 4954 3.887621 AGAGACGCAAAGCCTTGTATA 57.112 42.857 0.00 0.00 34.79 1.47
3342 4955 4.202245 AGAGACGCAAAGCCTTGTATAA 57.798 40.909 0.00 0.00 34.79 0.98
3343 4956 4.575885 AGAGACGCAAAGCCTTGTATAAA 58.424 39.130 0.00 0.00 34.79 1.40
3344 4957 5.186198 AGAGACGCAAAGCCTTGTATAAAT 58.814 37.500 0.00 0.00 34.79 1.40
3345 4958 6.346096 AGAGACGCAAAGCCTTGTATAAATA 58.654 36.000 0.00 0.00 34.79 1.40
3346 4959 6.258068 AGAGACGCAAAGCCTTGTATAAATAC 59.742 38.462 0.00 0.00 34.79 1.89
3347 4960 5.296035 AGACGCAAAGCCTTGTATAAATACC 59.704 40.000 0.00 0.00 34.79 2.73
3348 4961 4.944930 ACGCAAAGCCTTGTATAAATACCA 59.055 37.500 0.00 0.00 34.79 3.25
3349 4962 5.592688 ACGCAAAGCCTTGTATAAATACCAT 59.407 36.000 0.00 0.00 34.79 3.55
3350 4963 6.142817 CGCAAAGCCTTGTATAAATACCATC 58.857 40.000 0.00 0.00 34.79 3.51
3351 4964 6.447162 GCAAAGCCTTGTATAAATACCATCC 58.553 40.000 0.00 0.00 34.79 3.51
3352 4965 6.668323 CAAAGCCTTGTATAAATACCATCCG 58.332 40.000 0.00 0.00 32.33 4.18
3353 4966 5.818678 AGCCTTGTATAAATACCATCCGA 57.181 39.130 0.00 0.00 32.33 4.55
3354 4967 6.374417 AGCCTTGTATAAATACCATCCGAT 57.626 37.500 0.00 0.00 32.33 4.18
3355 4968 6.173339 AGCCTTGTATAAATACCATCCGATG 58.827 40.000 0.93 0.93 32.33 3.84
3356 4969 6.013725 AGCCTTGTATAAATACCATCCGATGA 60.014 38.462 10.12 0.00 32.33 2.92
3357 4970 6.823689 GCCTTGTATAAATACCATCCGATGAT 59.176 38.462 10.12 0.00 32.33 2.45
3358 4971 7.011482 GCCTTGTATAAATACCATCCGATGATC 59.989 40.741 10.12 0.00 32.33 2.92
3359 4972 8.040727 CCTTGTATAAATACCATCCGATGATCA 58.959 37.037 10.12 0.00 32.33 2.92
3360 4973 9.435688 CTTGTATAAATACCATCCGATGATCAA 57.564 33.333 10.12 0.00 32.33 2.57
3361 4974 9.958180 TTGTATAAATACCATCCGATGATCAAT 57.042 29.630 10.12 0.00 32.33 2.57
3362 4975 9.382275 TGTATAAATACCATCCGATGATCAATG 57.618 33.333 10.12 0.00 32.33 2.82
3363 4976 9.599866 GTATAAATACCATCCGATGATCAATGA 57.400 33.333 10.12 0.00 0.00 2.57
3365 4978 7.822161 AAATACCATCCGATGATCAATGAAA 57.178 32.000 10.12 0.00 0.00 2.69
3366 4979 7.444629 AATACCATCCGATGATCAATGAAAG 57.555 36.000 10.12 0.00 0.00 2.62
3367 4980 5.039920 ACCATCCGATGATCAATGAAAGA 57.960 39.130 10.12 0.00 0.00 2.52
3368 4981 5.061853 ACCATCCGATGATCAATGAAAGAG 58.938 41.667 10.12 0.00 0.00 2.85
3369 4982 5.163269 ACCATCCGATGATCAATGAAAGAGA 60.163 40.000 10.12 0.00 0.00 3.10
3370 4983 5.408909 CCATCCGATGATCAATGAAAGAGAG 59.591 44.000 10.12 0.00 0.00 3.20
3371 4984 5.859205 TCCGATGATCAATGAAAGAGAGA 57.141 39.130 0.00 0.00 0.00 3.10
3372 4985 6.225981 TCCGATGATCAATGAAAGAGAGAA 57.774 37.500 0.00 0.00 0.00 2.87
3373 4986 6.279123 TCCGATGATCAATGAAAGAGAGAAG 58.721 40.000 0.00 0.00 0.00 2.85
3374 4987 6.047870 CCGATGATCAATGAAAGAGAGAAGT 58.952 40.000 0.00 0.00 0.00 3.01
3375 4988 6.538021 CCGATGATCAATGAAAGAGAGAAGTT 59.462 38.462 0.00 0.00 0.00 2.66
3376 4989 7.254387 CCGATGATCAATGAAAGAGAGAAGTTC 60.254 40.741 0.00 0.00 0.00 3.01
3377 4990 6.957984 TGATCAATGAAAGAGAGAAGTTCG 57.042 37.500 0.00 0.00 0.00 3.95
3378 4991 6.691508 TGATCAATGAAAGAGAGAAGTTCGA 58.308 36.000 0.00 0.00 0.00 3.71
3379 4992 7.326454 TGATCAATGAAAGAGAGAAGTTCGAT 58.674 34.615 0.00 0.00 0.00 3.59
3380 4993 7.821359 TGATCAATGAAAGAGAGAAGTTCGATT 59.179 33.333 0.00 0.00 0.00 3.34
3381 4994 7.588143 TCAATGAAAGAGAGAAGTTCGATTC 57.412 36.000 0.00 0.00 0.00 2.52
3382 4995 7.154656 TCAATGAAAGAGAGAAGTTCGATTCA 58.845 34.615 11.44 11.44 33.90 2.57
3383 4996 7.821359 TCAATGAAAGAGAGAAGTTCGATTCAT 59.179 33.333 13.76 13.76 38.09 2.57
3384 4997 8.449397 CAATGAAAGAGAGAAGTTCGATTCATT 58.551 33.333 19.73 19.73 41.90 2.57
3385 4998 7.588143 TGAAAGAGAGAAGTTCGATTCATTC 57.412 36.000 1.86 11.74 0.00 2.67
3386 4999 7.382110 TGAAAGAGAGAAGTTCGATTCATTCT 58.618 34.615 16.03 2.30 34.78 2.40
3387 5000 7.543868 TGAAAGAGAGAAGTTCGATTCATTCTC 59.456 37.037 15.89 15.89 45.15 2.87
3388 5001 6.522625 AGAGAGAAGTTCGATTCATTCTCA 57.477 37.500 21.44 0.00 46.51 3.27
3389 5002 7.111247 AGAGAGAAGTTCGATTCATTCTCAT 57.889 36.000 21.44 12.57 46.51 2.90
3390 5003 7.555087 AGAGAGAAGTTCGATTCATTCTCATT 58.445 34.615 21.44 12.10 46.51 2.57
3391 5004 8.040132 AGAGAGAAGTTCGATTCATTCTCATTT 58.960 33.333 21.44 9.21 46.51 2.32
3392 5005 9.307121 GAGAGAAGTTCGATTCATTCTCATTTA 57.693 33.333 21.44 0.00 46.51 1.40
3393 5006 9.092876 AGAGAAGTTCGATTCATTCTCATTTAC 57.907 33.333 21.44 0.63 46.51 2.01
3394 5007 8.777865 AGAAGTTCGATTCATTCTCATTTACA 57.222 30.769 1.86 0.00 0.00 2.41
3395 5008 9.388506 AGAAGTTCGATTCATTCTCATTTACAT 57.611 29.630 1.86 0.00 0.00 2.29
3396 5009 9.994432 GAAGTTCGATTCATTCTCATTTACATT 57.006 29.630 0.00 0.00 0.00 2.71
3397 5010 9.994432 AAGTTCGATTCATTCTCATTTACATTC 57.006 29.630 0.00 0.00 0.00 2.67
3398 5011 9.166173 AGTTCGATTCATTCTCATTTACATTCA 57.834 29.630 0.00 0.00 0.00 2.57
3399 5012 9.773328 GTTCGATTCATTCTCATTTACATTCAA 57.227 29.630 0.00 0.00 0.00 2.69
3452 5065 0.394938 ACGCTTGTACCACATGTCCA 59.605 50.000 0.00 0.00 0.00 4.02
3465 5078 2.290641 ACATGTCCAGTTTGCTTTCGTC 59.709 45.455 0.00 0.00 0.00 4.20
3476 5089 5.973565 AGTTTGCTTTCGTCATTTCTTCTTG 59.026 36.000 0.00 0.00 0.00 3.02
3477 5090 5.499139 TTGCTTTCGTCATTTCTTCTTGT 57.501 34.783 0.00 0.00 0.00 3.16
3478 5091 5.499139 TGCTTTCGTCATTTCTTCTTGTT 57.501 34.783 0.00 0.00 0.00 2.83
3479 5092 5.890334 TGCTTTCGTCATTTCTTCTTGTTT 58.110 33.333 0.00 0.00 0.00 2.83
3480 5093 5.971202 TGCTTTCGTCATTTCTTCTTGTTTC 59.029 36.000 0.00 0.00 0.00 2.78
3481 5094 5.971202 GCTTTCGTCATTTCTTCTTGTTTCA 59.029 36.000 0.00 0.00 0.00 2.69
3499 5112 9.663904 CTTGTTTCATAATTTCTTCTTCGAACA 57.336 29.630 0.00 0.00 0.00 3.18
3503 5116 8.728088 TTCATAATTTCTTCTTCGAACAAAGC 57.272 30.769 9.64 0.00 0.00 3.51
3507 5120 4.488126 TTCTTCTTCGAACAAAGCATGG 57.512 40.909 9.64 0.00 0.00 3.66
3532 5145 1.659098 GTTTGTCCTTGTCGCTATCCG 59.341 52.381 0.00 0.00 38.61 4.18
3533 5146 0.459585 TTGTCCTTGTCGCTATCCGC 60.460 55.000 0.00 0.00 36.73 5.54
3542 5155 1.153449 CGCTATCCGCCCTTTCACA 60.153 57.895 0.00 0.00 34.21 3.58
3552 5165 2.289002 CGCCCTTTCACAATCATCTAGC 59.711 50.000 0.00 0.00 0.00 3.42
3575 5188 6.279882 GCTTCTCTCAAGCTACACTATTGAT 58.720 40.000 0.00 0.00 40.01 2.57
3581 5194 5.914033 TCAAGCTACACTATTGATACCCAC 58.086 41.667 0.00 0.00 0.00 4.61
3586 5199 5.405571 GCTACACTATTGATACCCACGATTG 59.594 44.000 0.00 0.00 0.00 2.67
3601 5214 1.393539 CGATTGTGAACTGGCCTTACG 59.606 52.381 3.32 0.00 0.00 3.18
3612 5225 2.147958 TGGCCTTACGACAAATCACAC 58.852 47.619 3.32 0.00 0.00 3.82
3617 5230 3.813166 CCTTACGACAAATCACACAAGGT 59.187 43.478 0.00 0.00 0.00 3.50
3630 5243 3.189287 CACACAAGGTGCCTCTGATAAAC 59.811 47.826 0.00 0.00 41.36 2.01
3638 5251 3.873952 GTGCCTCTGATAAACTGGATGAC 59.126 47.826 0.00 0.00 0.00 3.06
3640 5253 4.141846 TGCCTCTGATAAACTGGATGACTC 60.142 45.833 0.00 0.00 0.00 3.36
3643 5256 5.016051 TCTGATAAACTGGATGACTCAGC 57.984 43.478 0.00 0.00 35.78 4.26
3647 5260 3.618690 AAACTGGATGACTCAGCCTAC 57.381 47.619 14.41 0.00 41.01 3.18
3664 5277 2.038033 CCTACGGGTTCCTGTTTTCTCA 59.962 50.000 8.69 0.00 0.00 3.27
3671 5284 4.145052 GGTTCCTGTTTTCTCATTGGTCT 58.855 43.478 0.00 0.00 0.00 3.85
3672 5285 4.584743 GGTTCCTGTTTTCTCATTGGTCTT 59.415 41.667 0.00 0.00 0.00 3.01
3673 5286 5.768164 GGTTCCTGTTTTCTCATTGGTCTTA 59.232 40.000 0.00 0.00 0.00 2.10
3674 5287 6.434340 GGTTCCTGTTTTCTCATTGGTCTTAT 59.566 38.462 0.00 0.00 0.00 1.73
3675 5288 7.308435 GTTCCTGTTTTCTCATTGGTCTTATG 58.692 38.462 0.00 0.00 0.00 1.90
3676 5289 6.542821 TCCTGTTTTCTCATTGGTCTTATGT 58.457 36.000 0.00 0.00 0.00 2.29
3677 5290 7.004086 TCCTGTTTTCTCATTGGTCTTATGTT 58.996 34.615 0.00 0.00 0.00 2.71
3678 5291 7.505585 TCCTGTTTTCTCATTGGTCTTATGTTT 59.494 33.333 0.00 0.00 0.00 2.83
3679 5292 8.143835 CCTGTTTTCTCATTGGTCTTATGTTTT 58.856 33.333 0.00 0.00 0.00 2.43
3680 5293 8.870160 TGTTTTCTCATTGGTCTTATGTTTTG 57.130 30.769 0.00 0.00 0.00 2.44
3688 5301 8.729756 TCATTGGTCTTATGTTTTGTCATACTG 58.270 33.333 0.00 0.00 31.19 2.74
3699 5312 6.943146 TGTTTTGTCATACTGGTTATGCCTTA 59.057 34.615 0.00 0.00 38.01 2.69
3704 5317 6.821665 TGTCATACTGGTTATGCCTTAACTTC 59.178 38.462 6.61 0.00 40.14 3.01
3708 5321 4.200092 CTGGTTATGCCTTAACTTCCTCC 58.800 47.826 6.61 0.00 40.14 4.30
3733 5346 3.077359 CAAGAAACTGGTTGGCTCTAGG 58.923 50.000 0.00 0.00 0.00 3.02
3738 5351 2.616524 ACTGGTTGGCTCTAGGTTGTA 58.383 47.619 0.00 0.00 0.00 2.41
3750 5363 6.183360 GGCTCTAGGTTGTATGTTCTGTGATA 60.183 42.308 0.00 0.00 0.00 2.15
3767 5380 9.719355 TTCTGTGATAGAATTAGTGTTTGCTAA 57.281 29.630 0.00 0.00 40.43 3.09
3812 5425 5.704354 TGGACATGCTGATATTTACCCAAT 58.296 37.500 0.00 0.00 0.00 3.16
3815 5428 5.142639 ACATGCTGATATTTACCCAATGCT 58.857 37.500 0.00 0.00 0.00 3.79
3821 5434 5.132502 TGATATTTACCCAATGCTCCACTG 58.867 41.667 0.00 0.00 0.00 3.66
3830 5443 3.076621 CAATGCTCCACTGTTTAGCTCA 58.923 45.455 11.23 0.00 37.16 4.26
3852 5465 4.796830 CAGATGTTATCTTGTGTGCAATGC 59.203 41.667 0.00 0.00 37.58 3.56
3854 5467 2.095314 TGTTATCTTGTGTGCAATGCGG 60.095 45.455 0.00 0.00 33.65 5.69
3855 5468 1.819928 TATCTTGTGTGCAATGCGGT 58.180 45.000 0.00 0.00 33.65 5.68
3856 5469 0.961019 ATCTTGTGTGCAATGCGGTT 59.039 45.000 0.00 0.00 33.65 4.44
3857 5470 0.310543 TCTTGTGTGCAATGCGGTTC 59.689 50.000 0.00 0.00 33.65 3.62
3859 5472 0.743688 TTGTGTGCAATGCGGTTCTT 59.256 45.000 0.00 0.00 0.00 2.52
3860 5473 1.598882 TGTGTGCAATGCGGTTCTTA 58.401 45.000 0.00 0.00 0.00 2.10
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.506357 GCGCCATTTCTATTTCGTTTTGAATC 60.506 38.462 0.00 0.00 36.22 2.52
3 4 4.083003 AGCGCCATTTCTATTTCGTTTTGA 60.083 37.500 2.29 0.00 0.00 2.69
22 23 2.907910 AAACATGTGAATGAGAGCGC 57.092 45.000 0.00 0.00 0.00 5.92
30 31 8.389603 CAAAGTTTGTGCTAAAAACATGTGAAT 58.610 29.630 7.48 0.00 39.49 2.57
66 67 5.408356 AGAAATGACATTCATGAGCTTTGC 58.592 37.500 0.05 0.00 37.15 3.68
67 68 6.853720 AGAGAAATGACATTCATGAGCTTTG 58.146 36.000 0.05 0.00 37.15 2.77
68 69 7.066766 GGTAGAGAAATGACATTCATGAGCTTT 59.933 37.037 0.05 0.00 37.15 3.51
71 72 5.819379 TGGTAGAGAAATGACATTCATGAGC 59.181 40.000 0.05 0.00 37.15 4.26
72 73 7.854557 TTGGTAGAGAAATGACATTCATGAG 57.145 36.000 0.05 0.00 37.15 2.90
73 74 8.812513 ATTTGGTAGAGAAATGACATTCATGA 57.187 30.769 0.05 0.00 37.15 3.07
74 75 9.865321 AAATTTGGTAGAGAAATGACATTCATG 57.135 29.630 0.05 0.00 37.15 3.07
89 92 8.466617 TTTAGGTGCTTGTAAAATTTGGTAGA 57.533 30.769 0.00 0.00 0.00 2.59
160 163 9.579610 CCACGATTAAAAACTTAGCAAAATTTG 57.420 29.630 0.57 0.57 0.00 2.32
169 172 6.027749 GGTGCATCCACGATTAAAAACTTAG 58.972 40.000 0.00 0.00 43.00 2.18
179 182 2.124736 CCCGGTGCATCCACGATT 60.125 61.111 0.00 0.00 43.00 3.34
196 199 2.676471 ACCTTGGACATTGCGCCC 60.676 61.111 4.18 0.00 0.00 6.13
199 202 3.634568 TTTTACACCTTGGACATTGCG 57.365 42.857 0.00 0.00 0.00 4.85
203 206 4.098807 GTGTGGTTTTTACACCTTGGACAT 59.901 41.667 0.00 0.00 41.90 3.06
204 207 3.444388 GTGTGGTTTTTACACCTTGGACA 59.556 43.478 0.00 0.00 41.90 4.02
205 208 4.036567 GTGTGGTTTTTACACCTTGGAC 57.963 45.455 0.00 0.00 41.90 4.02
212 215 4.594136 CCGAAAGAGTGTGGTTTTTACAC 58.406 43.478 0.00 0.00 46.67 2.90
213 216 3.065648 GCCGAAAGAGTGTGGTTTTTACA 59.934 43.478 0.00 0.00 0.00 2.41
214 217 3.624900 GCCGAAAGAGTGTGGTTTTTAC 58.375 45.455 0.00 0.00 0.00 2.01
215 218 2.288458 CGCCGAAAGAGTGTGGTTTTTA 59.712 45.455 0.00 0.00 0.00 1.52
220 223 1.300697 GTCGCCGAAAGAGTGTGGT 60.301 57.895 0.00 0.00 0.00 4.16
241 258 3.248171 GTCGTCGTCGCTGGCATC 61.248 66.667 0.00 0.00 36.96 3.91
243 260 4.700365 CAGTCGTCGTCGCTGGCA 62.700 66.667 14.72 0.00 37.46 4.92
244 261 3.891586 TTCAGTCGTCGTCGCTGGC 62.892 63.158 19.38 3.34 39.60 4.85
247 264 2.126812 GCTTCAGTCGTCGTCGCT 60.127 61.111 0.00 0.00 36.96 4.93
248 265 2.126812 AGCTTCAGTCGTCGTCGC 60.127 61.111 0.00 0.00 36.96 5.19
252 269 2.375766 GCCACAGCTTCAGTCGTCG 61.376 63.158 0.00 0.00 35.50 5.12
280 297 2.434185 GCGCGACCATCAGAACCA 60.434 61.111 12.10 0.00 0.00 3.67
285 302 2.584418 CAGGAGCGCGACCATCAG 60.584 66.667 23.78 10.34 0.00 2.90
299 316 0.734889 CCGAAGTTATTGCTGGCAGG 59.265 55.000 17.64 0.00 0.00 4.85
315 332 1.479323 GTATGAACTACCAGCCACCGA 59.521 52.381 0.00 0.00 0.00 4.69
375 392 1.375523 GTTCGACTGTTGGCCGGAT 60.376 57.895 5.05 0.00 0.00 4.18
388 405 1.589630 CATGTCTCCACCGGTTCGA 59.410 57.895 2.97 1.91 0.00 3.71
410 427 4.180946 CTGGAGGTCTCGTCGCCG 62.181 72.222 0.00 0.00 0.00 6.46
442 459 1.377612 GTCCACCCCTAACACCACC 59.622 63.158 0.00 0.00 0.00 4.61
447 464 0.763604 TTGTCCGTCCACCCCTAACA 60.764 55.000 0.00 0.00 0.00 2.41
480 497 1.607801 GGCCATTTCACCCAGGAAGC 61.608 60.000 0.00 0.00 0.00 3.86
490 507 1.615165 TACTACCGCCGGCCATTTCA 61.615 55.000 23.46 0.00 0.00 2.69
577 594 0.463654 TGGCTCGAGCAAAACACTGT 60.464 50.000 36.27 0.00 44.36 3.55
579 596 1.388547 TTTGGCTCGAGCAAAACACT 58.611 45.000 36.27 0.00 38.91 3.55
671 688 5.567623 GCTCCAACGGATGATGTATGTAGAT 60.568 44.000 0.00 0.00 0.00 1.98
679 696 0.745845 GCTGCTCCAACGGATGATGT 60.746 55.000 0.00 0.00 0.00 3.06
683 700 0.813184 AAATGCTGCTCCAACGGATG 59.187 50.000 0.00 0.00 0.00 3.51
684 701 1.549203 AAAATGCTGCTCCAACGGAT 58.451 45.000 0.00 0.00 0.00 4.18
685 702 1.327303 AAAAATGCTGCTCCAACGGA 58.673 45.000 0.00 0.00 0.00 4.69
686 703 2.415893 CCTAAAAATGCTGCTCCAACGG 60.416 50.000 0.00 0.00 0.00 4.44
687 704 2.228822 ACCTAAAAATGCTGCTCCAACG 59.771 45.455 0.00 0.00 0.00 4.10
711 1106 6.183360 GGGAGTAATTGATTTTTACCTCACGG 60.183 42.308 0.00 0.00 31.31 4.94
713 1108 7.939784 AGGGAGTAATTGATTTTTACCTCAC 57.060 36.000 0.00 0.00 31.31 3.51
753 1148 5.767816 ACAGGTTCTCGTTTTAAAAGCAT 57.232 34.783 0.00 0.00 0.00 3.79
768 1163 2.347731 CCTCTTTCCGCTTACAGGTTC 58.652 52.381 0.00 0.00 0.00 3.62
771 1166 0.902531 TCCCTCTTTCCGCTTACAGG 59.097 55.000 0.00 0.00 0.00 4.00
773 1168 1.640917 ACTCCCTCTTTCCGCTTACA 58.359 50.000 0.00 0.00 0.00 2.41
774 1169 5.619533 CGATATACTCCCTCTTTCCGCTTAC 60.620 48.000 0.00 0.00 0.00 2.34
777 1172 2.820787 CGATATACTCCCTCTTTCCGCT 59.179 50.000 0.00 0.00 0.00 5.52
778 1173 2.094649 CCGATATACTCCCTCTTTCCGC 60.095 54.545 0.00 0.00 0.00 5.54
779 1174 3.418995 TCCGATATACTCCCTCTTTCCG 58.581 50.000 0.00 0.00 0.00 4.30
780 1175 4.460034 GTCTCCGATATACTCCCTCTTTCC 59.540 50.000 0.00 0.00 0.00 3.13
781 1176 4.154556 CGTCTCCGATATACTCCCTCTTTC 59.845 50.000 0.00 0.00 35.63 2.62
782 1177 4.073549 CGTCTCCGATATACTCCCTCTTT 58.926 47.826 0.00 0.00 35.63 2.52
783 1178 3.677190 CGTCTCCGATATACTCCCTCTT 58.323 50.000 0.00 0.00 35.63 2.85
787 1182 1.823797 AGCGTCTCCGATATACTCCC 58.176 55.000 0.00 0.00 35.63 4.30
789 1184 7.113264 GTCTTTTTAAGCGTCTCCGATATACTC 59.887 40.741 0.00 0.00 35.63 2.59
790 1185 6.916932 GTCTTTTTAAGCGTCTCCGATATACT 59.083 38.462 0.00 0.00 35.63 2.12
791 1186 6.694411 TGTCTTTTTAAGCGTCTCCGATATAC 59.306 38.462 0.00 0.00 35.63 1.47
797 2321 2.157085 GGTGTCTTTTTAAGCGTCTCCG 59.843 50.000 0.00 0.00 37.07 4.63
834 2358 2.307686 AGGAAGGAGGTTCGCCAATTTA 59.692 45.455 0.00 0.00 40.60 1.40
898 2423 2.597510 ACAAACCTTCTGGGCGGC 60.598 61.111 0.00 0.00 39.10 6.53
899 2424 0.955919 GAGACAAACCTTCTGGGCGG 60.956 60.000 0.00 0.00 39.10 6.13
900 2425 0.035458 AGAGACAAACCTTCTGGGCG 59.965 55.000 0.00 0.00 39.10 6.13
901 2426 1.611936 GGAGAGACAAACCTTCTGGGC 60.612 57.143 0.00 0.00 39.10 5.36
902 2427 1.003696 GGGAGAGACAAACCTTCTGGG 59.996 57.143 0.00 0.00 41.89 4.45
903 2428 1.003696 GGGGAGAGACAAACCTTCTGG 59.996 57.143 0.00 0.00 39.83 3.86
979 2507 2.492090 CGGAGTCCAGGCGAAGAG 59.508 66.667 10.49 0.00 0.00 2.85
980 2508 3.760035 GCGGAGTCCAGGCGAAGA 61.760 66.667 10.49 0.00 0.00 2.87
1060 2588 1.671901 CTCCTCCTCTCGGCAACTCC 61.672 65.000 0.00 0.00 0.00 3.85
1099 2627 0.034477 TCTTTTTCCAGATCGGGGGC 60.034 55.000 12.28 0.00 34.36 5.80
1167 2695 3.528370 AATCCGCCGTCCTCTCCG 61.528 66.667 0.00 0.00 0.00 4.63
1193 2722 3.116434 TCCCCTGATCCATCTTCAGATCT 60.116 47.826 2.36 0.00 42.63 2.75
1195 2724 2.978278 GTCCCCTGATCCATCTTCAGAT 59.022 50.000 2.36 0.00 42.63 2.90
1197 2726 2.406559 AGTCCCCTGATCCATCTTCAG 58.593 52.381 0.00 0.00 40.25 3.02
1198 2727 2.575921 AGTCCCCTGATCCATCTTCA 57.424 50.000 0.00 0.00 0.00 3.02
1215 2770 0.555769 CCTCTCTGCTCTCCCCTAGT 59.444 60.000 0.00 0.00 0.00 2.57
1216 2771 0.850100 TCCTCTCTGCTCTCCCCTAG 59.150 60.000 0.00 0.00 0.00 3.02
1217 2772 1.540115 ATCCTCTCTGCTCTCCCCTA 58.460 55.000 0.00 0.00 0.00 3.53
1218 2773 0.641601 AATCCTCTCTGCTCTCCCCT 59.358 55.000 0.00 0.00 0.00 4.79
1219 2774 0.758123 CAATCCTCTCTGCTCTCCCC 59.242 60.000 0.00 0.00 0.00 4.81
1259 2820 0.850100 TCCTCTCTGCTCTCCCCTAG 59.150 60.000 0.00 0.00 0.00 3.02
1260 2821 1.540115 ATCCTCTCTGCTCTCCCCTA 58.460 55.000 0.00 0.00 0.00 3.53
1261 2822 0.641601 AATCCTCTCTGCTCTCCCCT 59.358 55.000 0.00 0.00 0.00 4.79
1262 2823 0.758123 CAATCCTCTCTGCTCTCCCC 59.242 60.000 0.00 0.00 0.00 4.81
1264 2825 0.106521 GGCAATCCTCTCTGCTCTCC 59.893 60.000 0.00 0.00 38.65 3.71
1266 2827 0.831966 CAGGCAATCCTCTCTGCTCT 59.168 55.000 0.00 0.00 41.93 4.09
1267 2828 0.814812 GCAGGCAATCCTCTCTGCTC 60.815 60.000 6.88 0.00 46.29 4.26
1268 2829 1.224039 GCAGGCAATCCTCTCTGCT 59.776 57.895 6.88 0.00 46.29 4.24
1269 2830 3.824810 GCAGGCAATCCTCTCTGC 58.175 61.111 0.00 0.00 41.93 4.26
1270 2831 0.252479 ACAGCAGGCAATCCTCTCTG 59.748 55.000 0.00 7.95 41.93 3.35
1272 2833 2.698855 TTACAGCAGGCAATCCTCTC 57.301 50.000 0.00 0.00 41.93 3.20
1273 2834 3.659183 ATTTACAGCAGGCAATCCTCT 57.341 42.857 0.00 0.00 41.93 3.69
1274 2835 5.065914 TCATATTTACAGCAGGCAATCCTC 58.934 41.667 0.00 0.00 41.93 3.71
1275 2836 5.052693 TCATATTTACAGCAGGCAATCCT 57.947 39.130 0.00 0.00 45.66 3.24
1276 2837 4.217118 CCTCATATTTACAGCAGGCAATCC 59.783 45.833 0.00 0.00 0.00 3.01
1277 2838 5.065914 TCCTCATATTTACAGCAGGCAATC 58.934 41.667 0.00 0.00 0.00 2.67
1278 2839 5.052693 TCCTCATATTTACAGCAGGCAAT 57.947 39.130 0.00 0.00 0.00 3.56
1279 2840 4.502105 TCCTCATATTTACAGCAGGCAA 57.498 40.909 0.00 0.00 0.00 4.52
1280 2841 4.349048 AGATCCTCATATTTACAGCAGGCA 59.651 41.667 0.00 0.00 0.00 4.75
1281 2842 4.694509 CAGATCCTCATATTTACAGCAGGC 59.305 45.833 0.00 0.00 0.00 4.85
1282 2843 5.862845 ACAGATCCTCATATTTACAGCAGG 58.137 41.667 0.00 0.00 0.00 4.85
1283 2844 7.496920 TCAAACAGATCCTCATATTTACAGCAG 59.503 37.037 0.00 0.00 0.00 4.24
1284 2845 7.337938 TCAAACAGATCCTCATATTTACAGCA 58.662 34.615 0.00 0.00 0.00 4.41
1285 2846 7.792374 TCAAACAGATCCTCATATTTACAGC 57.208 36.000 0.00 0.00 0.00 4.40
1291 2852 7.893124 AGCAAATCAAACAGATCCTCATATT 57.107 32.000 0.00 0.00 35.39 1.28
1347 2908 4.258860 GCAAACGAGAAACGAACAAAAGTG 60.259 41.667 0.00 0.00 45.77 3.16
1401 2962 4.586001 AGGACGAAGGACACTAGTTGTAAA 59.414 41.667 0.00 0.00 39.17 2.01
1410 2971 1.134220 TGCAAAAGGACGAAGGACACT 60.134 47.619 0.00 0.00 0.00 3.55
1464 3027 3.708631 TGATTCTGGATCTCAAGGACTCC 59.291 47.826 0.00 0.00 35.69 3.85
1465 3028 5.350504 TTGATTCTGGATCTCAAGGACTC 57.649 43.478 0.00 0.00 35.69 3.36
1466 3029 4.383989 GCTTGATTCTGGATCTCAAGGACT 60.384 45.833 18.21 0.00 43.82 3.85
1524 3087 0.541998 TGGAGAACTTCAGCCGGAGA 60.542 55.000 5.05 0.00 0.00 3.71
1526 3089 1.975327 CTGGAGAACTTCAGCCGGA 59.025 57.895 5.05 0.00 0.00 5.14
1737 3303 0.250727 ATGTTGTCCTTGGGGTCGTG 60.251 55.000 0.00 0.00 0.00 4.35
1817 3383 4.250305 ACCAAGAGGCGGTGCGTT 62.250 61.111 0.00 0.00 39.06 4.84
1905 3471 0.954449 ACGAAGAAGCCGTCGAGAGA 60.954 55.000 7.65 0.00 44.97 3.10
2015 3584 1.303236 CGAACAGGGGGCATTCACA 60.303 57.895 0.00 0.00 0.00 3.58
2023 3592 2.754664 AAAGCAGAGCGAACAGGGGG 62.755 60.000 0.00 0.00 0.00 5.40
2025 3594 1.580845 CCAAAGCAGAGCGAACAGGG 61.581 60.000 0.00 0.00 0.00 4.45
2058 3627 0.250467 TTGGAGAGCAAGGTGAGCAC 60.250 55.000 0.00 0.00 0.00 4.40
2157 3744 0.768221 TCACCTTTGACCTGCCTCCT 60.768 55.000 0.00 0.00 0.00 3.69
2163 3750 1.273327 GGCCAAATCACCTTTGACCTG 59.727 52.381 0.00 0.00 45.96 4.00
2164 3751 1.632589 GGCCAAATCACCTTTGACCT 58.367 50.000 0.00 0.00 45.96 3.85
2204 3791 5.588648 TGTTTCGTCTGATTCCAAGTTTCTT 59.411 36.000 0.00 0.00 0.00 2.52
2209 3796 2.808543 GCTGTTTCGTCTGATTCCAAGT 59.191 45.455 0.00 0.00 0.00 3.16
2221 3808 2.972505 CCACGCCAGCTGTTTCGT 60.973 61.111 13.81 15.54 35.35 3.85
2233 3820 1.400242 GCAGATCTTTGACAACCACGC 60.400 52.381 0.00 0.00 0.00 5.34
2234 3821 1.136252 CGCAGATCTTTGACAACCACG 60.136 52.381 0.00 0.00 0.00 4.94
2238 3825 3.433274 TCACATCGCAGATCTTTGACAAC 59.567 43.478 0.00 0.00 45.12 3.32
2239 3826 3.663025 TCACATCGCAGATCTTTGACAA 58.337 40.909 0.00 0.00 45.12 3.18
2243 3830 4.331992 ACTTCATCACATCGCAGATCTTTG 59.668 41.667 0.00 0.00 45.12 2.77
2368 3960 0.928505 TGTCCCTTGATGATGGCCAT 59.071 50.000 20.96 20.96 38.43 4.40
2399 3994 5.357032 CCATTCTTGGCTTCGTACCTTAAAT 59.643 40.000 0.00 0.00 35.85 1.40
2556 4151 4.898320 TGCATTTCCATATACGAGCAGAT 58.102 39.130 0.00 0.00 0.00 2.90
2568 4163 3.119388 CGTCCTTGATGTTGCATTTCCAT 60.119 43.478 0.00 0.00 0.00 3.41
2637 4232 1.336517 CCGACGAGGACAAACTGCTTA 60.337 52.381 0.00 0.00 45.00 3.09
2670 4265 4.498894 TGACAGAAGCTGGATGATCATT 57.501 40.909 10.14 0.00 35.51 2.57
2672 4267 3.870274 CTTGACAGAAGCTGGATGATCA 58.130 45.455 0.00 0.00 35.51 2.92
2798 4404 7.254624 GGCTTAACCAAAATAACAAAACAGGTG 60.255 37.037 0.00 0.00 38.86 4.00
2799 4405 6.764085 GGCTTAACCAAAATAACAAAACAGGT 59.236 34.615 0.00 0.00 38.86 4.00
2812 4418 6.110033 GGAAGAAACAAAGGCTTAACCAAAA 58.890 36.000 0.00 0.00 43.14 2.44
2824 4430 1.953686 TCTTGCCCGGAAGAAACAAAG 59.046 47.619 0.73 0.00 0.00 2.77
2827 4433 2.060050 TTTCTTGCCCGGAAGAAACA 57.940 45.000 21.19 6.48 43.72 2.83
2832 4438 1.302192 TCCGTTTCTTGCCCGGAAG 60.302 57.895 0.73 0.00 46.91 3.46
2918 4524 3.243168 CCACATTGCACGCTAGCATAAAT 60.243 43.478 16.45 5.86 45.19 1.40
2929 4539 5.343058 CAGAAATTAAGAACCACATTGCACG 59.657 40.000 0.00 0.00 0.00 5.34
3058 4668 8.709646 CCTGCCTAGACGAAAATATTGTAATAC 58.290 37.037 0.00 0.00 0.00 1.89
3063 4673 5.353394 TCCTGCCTAGACGAAAATATTGT 57.647 39.130 0.00 0.00 0.00 2.71
3073 4683 2.457366 ACTTGTTTCCTGCCTAGACG 57.543 50.000 0.00 0.00 0.00 4.18
3102 4712 3.201266 AGTTCCACAAACCACTGGTAAGA 59.799 43.478 0.00 0.00 38.76 2.10
3126 4736 2.571653 CCTCCCTGGTCTTGACATACAA 59.428 50.000 3.08 0.00 36.97 2.41
3135 4745 2.294078 CGAAGCCCTCCCTGGTCTT 61.294 63.158 0.00 0.00 0.00 3.01
3138 4748 2.203938 TTCGAAGCCCTCCCTGGT 60.204 61.111 0.00 0.00 0.00 4.00
3142 4752 0.250770 ACTTTGTTCGAAGCCCTCCC 60.251 55.000 0.00 0.00 0.00 4.30
3145 4755 3.695830 TCATACTTTGTTCGAAGCCCT 57.304 42.857 0.00 0.00 0.00 5.19
3197 4810 7.831893 TTTGGGCATACAAACCGTCTATTACG 61.832 42.308 0.00 0.00 41.90 3.18
3198 4811 4.444536 TGGGCATACAAACCGTCTATTAC 58.555 43.478 0.00 0.00 0.00 1.89
3199 4812 4.757019 TGGGCATACAAACCGTCTATTA 57.243 40.909 0.00 0.00 0.00 0.98
3200 4813 3.637911 TGGGCATACAAACCGTCTATT 57.362 42.857 0.00 0.00 0.00 1.73
3201 4814 3.637911 TTGGGCATACAAACCGTCTAT 57.362 42.857 0.00 0.00 0.00 1.98
3202 4815 3.340034 CTTTGGGCATACAAACCGTCTA 58.660 45.455 0.00 0.00 35.57 2.59
3203 4816 2.159382 CTTTGGGCATACAAACCGTCT 58.841 47.619 0.00 0.00 35.57 4.18
3204 4817 1.402325 GCTTTGGGCATACAAACCGTC 60.402 52.381 0.00 0.00 41.35 4.79
3205 4818 0.601057 GCTTTGGGCATACAAACCGT 59.399 50.000 0.00 0.00 41.35 4.83
3206 4819 0.455972 CGCTTTGGGCATACAAACCG 60.456 55.000 0.00 0.00 41.91 4.44
3207 4820 0.735978 GCGCTTTGGGCATACAAACC 60.736 55.000 0.00 0.00 41.23 3.27
3208 4821 0.735978 GGCGCTTTGGGCATACAAAC 60.736 55.000 7.64 0.00 43.41 2.93
3209 4822 1.589113 GGCGCTTTGGGCATACAAA 59.411 52.632 7.64 0.00 43.41 2.83
3210 4823 2.695759 CGGCGCTTTGGGCATACAA 61.696 57.895 7.64 0.00 43.41 2.41
3211 4824 2.523453 TACGGCGCTTTGGGCATACA 62.523 55.000 6.90 0.00 43.41 2.29
3212 4825 1.816259 TACGGCGCTTTGGGCATAC 60.816 57.895 6.90 0.00 43.41 2.39
3213 4826 1.816259 GTACGGCGCTTTGGGCATA 60.816 57.895 6.90 0.00 43.41 3.14
3214 4827 3.131478 GTACGGCGCTTTGGGCAT 61.131 61.111 6.90 0.00 43.41 4.40
3217 4830 4.745751 TCCGTACGGCGCTTTGGG 62.746 66.667 29.64 2.53 39.71 4.12
3218 4831 3.484547 GTCCGTACGGCGCTTTGG 61.485 66.667 29.64 3.99 39.71 3.28
3219 4832 3.834373 CGTCCGTACGGCGCTTTG 61.834 66.667 29.64 10.69 45.50 2.77
3228 4841 3.776656 GGACACATGCGTCCGTAC 58.223 61.111 16.79 0.00 45.77 3.67
3235 4848 2.179767 TCCGTACGGACACATGCG 59.820 61.111 32.61 4.39 46.59 4.73
3246 4859 1.278238 CAATGAGAAGGCGTCCGTAC 58.722 55.000 0.00 0.00 0.00 3.67
3247 4860 0.892755 ACAATGAGAAGGCGTCCGTA 59.107 50.000 0.00 0.00 0.00 4.02
3248 4861 0.892755 TACAATGAGAAGGCGTCCGT 59.107 50.000 0.00 0.00 0.00 4.69
3249 4862 1.278238 GTACAATGAGAAGGCGTCCG 58.722 55.000 0.00 0.00 0.00 4.79
3250 4863 2.094182 TCTGTACAATGAGAAGGCGTCC 60.094 50.000 0.00 0.00 0.00 4.79
3251 4864 2.924290 GTCTGTACAATGAGAAGGCGTC 59.076 50.000 0.00 0.00 0.00 5.19
3252 4865 2.671351 CGTCTGTACAATGAGAAGGCGT 60.671 50.000 0.00 0.00 31.65 5.68
3253 4866 1.920574 CGTCTGTACAATGAGAAGGCG 59.079 52.381 0.00 0.00 0.00 5.52
3254 4867 1.661112 GCGTCTGTACAATGAGAAGGC 59.339 52.381 0.00 0.00 0.00 4.35
3255 4868 2.093973 AGGCGTCTGTACAATGAGAAGG 60.094 50.000 0.00 0.00 0.00 3.46
3256 4869 2.926200 CAGGCGTCTGTACAATGAGAAG 59.074 50.000 9.39 0.00 36.30 2.85
3257 4870 2.959516 CAGGCGTCTGTACAATGAGAA 58.040 47.619 9.39 0.00 36.30 2.87
3258 4871 2.654749 CAGGCGTCTGTACAATGAGA 57.345 50.000 9.39 0.00 36.30 3.27
3268 4881 0.244721 TCAGTGATCACAGGCGTCTG 59.755 55.000 27.02 17.12 46.10 3.51
3269 4882 0.969149 TTCAGTGATCACAGGCGTCT 59.031 50.000 27.02 1.97 0.00 4.18
3270 4883 1.071605 GTTCAGTGATCACAGGCGTC 58.928 55.000 27.02 8.91 0.00 5.19
3271 4884 0.392706 TGTTCAGTGATCACAGGCGT 59.607 50.000 27.02 3.53 0.00 5.68
3272 4885 1.462283 CTTGTTCAGTGATCACAGGCG 59.538 52.381 27.02 12.53 0.00 5.52
3273 4886 1.198637 GCTTGTTCAGTGATCACAGGC 59.801 52.381 27.02 14.11 36.51 4.85
3274 4887 1.462283 CGCTTGTTCAGTGATCACAGG 59.538 52.381 27.02 18.19 34.56 4.00
3275 4888 1.136141 GCGCTTGTTCAGTGATCACAG 60.136 52.381 27.02 19.61 34.56 3.66
3276 4889 0.867746 GCGCTTGTTCAGTGATCACA 59.132 50.000 27.02 5.13 34.56 3.58
3277 4890 0.166814 GGCGCTTGTTCAGTGATCAC 59.833 55.000 18.47 18.47 34.56 3.06
3278 4891 0.035317 AGGCGCTTGTTCAGTGATCA 59.965 50.000 7.64 0.00 34.56 2.92
3279 4892 1.129437 GAAGGCGCTTGTTCAGTGATC 59.871 52.381 7.64 0.00 34.56 2.92
3280 4893 1.160137 GAAGGCGCTTGTTCAGTGAT 58.840 50.000 7.64 0.00 34.56 3.06
3281 4894 0.106708 AGAAGGCGCTTGTTCAGTGA 59.893 50.000 7.64 0.00 34.56 3.41
3282 4895 0.514691 GAGAAGGCGCTTGTTCAGTG 59.485 55.000 7.64 0.00 35.92 3.66
3283 4896 0.603975 GGAGAAGGCGCTTGTTCAGT 60.604 55.000 7.64 0.00 0.00 3.41
3284 4897 0.321122 AGGAGAAGGCGCTTGTTCAG 60.321 55.000 7.64 0.00 0.00 3.02
3285 4898 0.108585 AAGGAGAAGGCGCTTGTTCA 59.891 50.000 7.64 0.00 0.00 3.18
3286 4899 0.519077 CAAGGAGAAGGCGCTTGTTC 59.481 55.000 7.64 8.47 0.00 3.18
3287 4900 0.179018 ACAAGGAGAAGGCGCTTGTT 60.179 50.000 7.64 0.00 35.05 2.83
3288 4901 0.685097 TACAAGGAGAAGGCGCTTGT 59.315 50.000 7.64 10.80 40.67 3.16
3289 4902 1.464997 GTTACAAGGAGAAGGCGCTTG 59.535 52.381 7.64 4.35 0.00 4.01
3290 4903 1.610886 GGTTACAAGGAGAAGGCGCTT 60.611 52.381 7.64 0.00 0.00 4.68
3291 4904 0.036294 GGTTACAAGGAGAAGGCGCT 60.036 55.000 7.64 0.00 0.00 5.92
3292 4905 1.359459 CGGTTACAAGGAGAAGGCGC 61.359 60.000 0.00 0.00 0.00 6.53
3293 4906 0.245539 TCGGTTACAAGGAGAAGGCG 59.754 55.000 0.00 0.00 0.00 5.52
3294 4907 1.275573 AGTCGGTTACAAGGAGAAGGC 59.724 52.381 0.00 0.00 0.00 4.35
3295 4908 3.679824 AAGTCGGTTACAAGGAGAAGG 57.320 47.619 0.00 0.00 0.00 3.46
3296 4909 3.186613 GCAAAGTCGGTTACAAGGAGAAG 59.813 47.826 0.00 0.00 0.00 2.85
3297 4910 3.135994 GCAAAGTCGGTTACAAGGAGAA 58.864 45.455 0.00 0.00 0.00 2.87
3298 4911 2.549349 GGCAAAGTCGGTTACAAGGAGA 60.549 50.000 0.00 0.00 0.00 3.71
3299 4912 1.804748 GGCAAAGTCGGTTACAAGGAG 59.195 52.381 0.00 0.00 0.00 3.69
3300 4913 1.141254 TGGCAAAGTCGGTTACAAGGA 59.859 47.619 0.00 0.00 0.00 3.36
3301 4914 1.600023 TGGCAAAGTCGGTTACAAGG 58.400 50.000 0.00 0.00 0.00 3.61
3302 4915 2.875933 TCTTGGCAAAGTCGGTTACAAG 59.124 45.455 0.00 0.00 36.19 3.16
3303 4916 2.875933 CTCTTGGCAAAGTCGGTTACAA 59.124 45.455 0.00 0.00 34.78 2.41
3304 4917 2.103432 TCTCTTGGCAAAGTCGGTTACA 59.897 45.455 0.00 0.00 34.78 2.41
3305 4918 2.479275 GTCTCTTGGCAAAGTCGGTTAC 59.521 50.000 0.00 0.00 34.78 2.50
3306 4919 2.762745 GTCTCTTGGCAAAGTCGGTTA 58.237 47.619 0.00 0.00 34.78 2.85
3307 4920 1.594331 GTCTCTTGGCAAAGTCGGTT 58.406 50.000 0.00 0.00 34.78 4.44
3308 4921 0.600255 CGTCTCTTGGCAAAGTCGGT 60.600 55.000 0.00 0.00 34.78 4.69
3309 4922 1.901650 GCGTCTCTTGGCAAAGTCGG 61.902 60.000 20.34 4.73 34.78 4.79
3310 4923 1.221466 TGCGTCTCTTGGCAAAGTCG 61.221 55.000 17.28 17.28 35.98 4.18
3311 4924 0.944386 TTGCGTCTCTTGGCAAAGTC 59.056 50.000 0.00 0.00 45.34 3.01
3312 4925 3.094386 TTGCGTCTCTTGGCAAAGT 57.906 47.368 0.00 0.00 45.34 2.66
3315 4928 1.654220 GCTTTGCGTCTCTTGGCAA 59.346 52.632 0.00 0.00 46.52 4.52
3316 4929 2.260869 GGCTTTGCGTCTCTTGGCA 61.261 57.895 0.00 0.00 37.39 4.92
3317 4930 1.518903 AAGGCTTTGCGTCTCTTGGC 61.519 55.000 0.00 0.00 0.00 4.52
3318 4931 0.239347 CAAGGCTTTGCGTCTCTTGG 59.761 55.000 0.00 0.00 33.32 3.61
3319 4932 0.947244 ACAAGGCTTTGCGTCTCTTG 59.053 50.000 8.71 0.27 40.21 3.02
3320 4933 2.543777 TACAAGGCTTTGCGTCTCTT 57.456 45.000 8.71 0.00 37.85 2.85
3321 4934 2.770164 ATACAAGGCTTTGCGTCTCT 57.230 45.000 8.71 0.00 37.85 3.10
3322 4935 4.939509 TTTATACAAGGCTTTGCGTCTC 57.060 40.909 8.71 0.00 37.85 3.36
3323 4936 5.296035 GGTATTTATACAAGGCTTTGCGTCT 59.704 40.000 8.71 0.00 37.85 4.18
3324 4937 5.065474 TGGTATTTATACAAGGCTTTGCGTC 59.935 40.000 8.71 0.00 37.85 5.19
3325 4938 4.944930 TGGTATTTATACAAGGCTTTGCGT 59.055 37.500 8.71 0.00 37.85 5.24
3326 4939 5.493133 TGGTATTTATACAAGGCTTTGCG 57.507 39.130 8.71 0.00 37.85 4.85
3327 4940 6.447162 GGATGGTATTTATACAAGGCTTTGC 58.553 40.000 8.71 0.00 37.85 3.68
3328 4941 6.485313 TCGGATGGTATTTATACAAGGCTTTG 59.515 38.462 7.07 7.07 40.24 2.77
3329 4942 6.597562 TCGGATGGTATTTATACAAGGCTTT 58.402 36.000 0.00 0.00 34.98 3.51
3330 4943 6.182507 TCGGATGGTATTTATACAAGGCTT 57.817 37.500 0.00 0.00 34.98 4.35
3331 4944 5.818678 TCGGATGGTATTTATACAAGGCT 57.181 39.130 2.61 0.00 34.98 4.58
3332 4945 6.170506 TCATCGGATGGTATTTATACAAGGC 58.829 40.000 17.42 0.00 34.98 4.35
3333 4946 8.040727 TGATCATCGGATGGTATTTATACAAGG 58.959 37.037 17.42 0.00 32.53 3.61
3334 4947 9.435688 TTGATCATCGGATGGTATTTATACAAG 57.564 33.333 17.42 0.00 32.53 3.16
3335 4948 9.958180 ATTGATCATCGGATGGTATTTATACAA 57.042 29.630 17.42 9.41 32.53 2.41
3336 4949 9.382275 CATTGATCATCGGATGGTATTTATACA 57.618 33.333 17.42 0.66 32.53 2.29
3337 4950 9.599866 TCATTGATCATCGGATGGTATTTATAC 57.400 33.333 17.42 0.00 32.67 1.47
3339 4952 9.519191 TTTCATTGATCATCGGATGGTATTTAT 57.481 29.630 17.42 2.95 32.67 1.40
3340 4953 8.916628 TTTCATTGATCATCGGATGGTATTTA 57.083 30.769 17.42 0.00 32.67 1.40
3341 4954 7.720957 TCTTTCATTGATCATCGGATGGTATTT 59.279 33.333 17.42 0.00 32.67 1.40
3342 4955 7.226441 TCTTTCATTGATCATCGGATGGTATT 58.774 34.615 17.42 1.36 32.67 1.89
3343 4956 6.772605 TCTTTCATTGATCATCGGATGGTAT 58.227 36.000 17.42 5.09 32.67 2.73
3344 4957 6.041979 TCTCTTTCATTGATCATCGGATGGTA 59.958 38.462 17.42 0.00 32.67 3.25
3345 4958 5.039920 TCTTTCATTGATCATCGGATGGT 57.960 39.130 17.42 11.04 32.67 3.55
3346 4959 5.303165 TCTCTTTCATTGATCATCGGATGG 58.697 41.667 17.42 1.12 32.67 3.51
3347 4960 6.221659 TCTCTCTTTCATTGATCATCGGATG 58.778 40.000 11.79 11.79 32.67 3.51
3348 4961 6.416631 TCTCTCTTTCATTGATCATCGGAT 57.583 37.500 0.00 0.00 36.13 4.18
3349 4962 5.859205 TCTCTCTTTCATTGATCATCGGA 57.141 39.130 0.00 0.00 0.00 4.55
3350 4963 6.047870 ACTTCTCTCTTTCATTGATCATCGG 58.952 40.000 0.00 0.00 0.00 4.18
3351 4964 7.514903 CGAACTTCTCTCTTTCATTGATCATCG 60.515 40.741 0.00 0.00 0.00 3.84
3352 4965 7.490725 TCGAACTTCTCTCTTTCATTGATCATC 59.509 37.037 0.00 0.00 0.00 2.92
3353 4966 7.326454 TCGAACTTCTCTCTTTCATTGATCAT 58.674 34.615 0.00 0.00 0.00 2.45
3354 4967 6.691508 TCGAACTTCTCTCTTTCATTGATCA 58.308 36.000 0.00 0.00 0.00 2.92
3355 4968 7.769272 ATCGAACTTCTCTCTTTCATTGATC 57.231 36.000 0.00 0.00 0.00 2.92
3356 4969 7.821359 TGAATCGAACTTCTCTCTTTCATTGAT 59.179 33.333 0.00 0.00 0.00 2.57
3357 4970 7.154656 TGAATCGAACTTCTCTCTTTCATTGA 58.845 34.615 0.00 0.00 0.00 2.57
3358 4971 7.356641 TGAATCGAACTTCTCTCTTTCATTG 57.643 36.000 0.00 0.00 0.00 2.82
3359 4972 8.558973 AATGAATCGAACTTCTCTCTTTCATT 57.441 30.769 9.38 9.38 0.00 2.57
3360 4973 8.040132 AGAATGAATCGAACTTCTCTCTTTCAT 58.960 33.333 0.00 0.00 0.00 2.57
3361 4974 7.382110 AGAATGAATCGAACTTCTCTCTTTCA 58.618 34.615 0.00 0.00 0.00 2.69
3362 4975 7.543868 TGAGAATGAATCGAACTTCTCTCTTTC 59.456 37.037 20.58 6.28 42.53 2.62
3363 4976 7.382110 TGAGAATGAATCGAACTTCTCTCTTT 58.618 34.615 20.58 0.00 42.53 2.52
3364 4977 6.929625 TGAGAATGAATCGAACTTCTCTCTT 58.070 36.000 20.58 0.00 42.53 2.85
3365 4978 6.522625 TGAGAATGAATCGAACTTCTCTCT 57.477 37.500 20.58 13.09 42.53 3.10
3366 4979 7.769272 AATGAGAATGAATCGAACTTCTCTC 57.231 36.000 20.58 15.36 42.53 3.20
3367 4980 9.092876 GTAAATGAGAATGAATCGAACTTCTCT 57.907 33.333 20.58 9.38 42.53 3.10
3368 4981 8.873830 TGTAAATGAGAATGAATCGAACTTCTC 58.126 33.333 16.46 16.46 42.44 2.87
3369 4982 8.777865 TGTAAATGAGAATGAATCGAACTTCT 57.222 30.769 0.00 0.00 0.00 2.85
3370 4983 9.994432 AATGTAAATGAGAATGAATCGAACTTC 57.006 29.630 0.00 0.00 0.00 3.01
3371 4984 9.994432 GAATGTAAATGAGAATGAATCGAACTT 57.006 29.630 0.00 0.00 0.00 2.66
3372 4985 9.166173 TGAATGTAAATGAGAATGAATCGAACT 57.834 29.630 0.00 0.00 0.00 3.01
3373 4986 9.773328 TTGAATGTAAATGAGAATGAATCGAAC 57.227 29.630 0.00 0.00 0.00 3.95
3374 4987 9.773328 GTTGAATGTAAATGAGAATGAATCGAA 57.227 29.630 0.00 0.00 0.00 3.71
3375 4988 8.945057 TGTTGAATGTAAATGAGAATGAATCGA 58.055 29.630 0.00 0.00 0.00 3.59
3376 4989 9.726232 ATGTTGAATGTAAATGAGAATGAATCG 57.274 29.630 0.00 0.00 0.00 3.34
3395 5008 9.941325 AGCATTCCAAAAATAATACATGTTGAA 57.059 25.926 2.30 0.00 0.00 2.69
3396 5009 9.941325 AAGCATTCCAAAAATAATACATGTTGA 57.059 25.926 2.30 0.00 0.00 3.18
3452 5065 5.757850 AGAAGAAATGACGAAAGCAAACT 57.242 34.783 0.00 0.00 0.00 2.66
3477 5090 9.180678 GCTTTGTTCGAAGAAGAAATTATGAAA 57.819 29.630 19.89 0.00 45.90 2.69
3478 5091 8.349245 TGCTTTGTTCGAAGAAGAAATTATGAA 58.651 29.630 19.89 0.00 45.90 2.57
3479 5092 7.870826 TGCTTTGTTCGAAGAAGAAATTATGA 58.129 30.769 19.89 0.00 45.90 2.15
3480 5093 8.581263 CATGCTTTGTTCGAAGAAGAAATTATG 58.419 33.333 19.89 11.39 45.90 1.90
3481 5094 7.756722 CCATGCTTTGTTCGAAGAAGAAATTAT 59.243 33.333 19.89 5.05 45.90 1.28
3499 5112 1.615392 GGACAAACTGCTCCATGCTTT 59.385 47.619 0.00 0.00 43.37 3.51
3503 5116 2.227388 GACAAGGACAAACTGCTCCATG 59.773 50.000 0.00 0.00 32.54 3.66
3507 5120 0.235926 GCGACAAGGACAAACTGCTC 59.764 55.000 0.00 0.00 0.00 4.26
3532 5145 3.549794 AGCTAGATGATTGTGAAAGGGC 58.450 45.455 0.00 0.00 0.00 5.19
3533 5146 5.435291 AGAAGCTAGATGATTGTGAAAGGG 58.565 41.667 0.00 0.00 0.00 3.95
3552 5165 7.865385 GGTATCAATAGTGTAGCTTGAGAGAAG 59.135 40.741 0.00 0.00 32.82 2.85
3569 5182 5.815222 CAGTTCACAATCGTGGGTATCAATA 59.185 40.000 0.00 0.00 43.79 1.90
3572 5185 3.595173 CAGTTCACAATCGTGGGTATCA 58.405 45.455 0.00 0.00 43.79 2.15
3575 5188 1.609580 GCCAGTTCACAATCGTGGGTA 60.610 52.381 0.00 0.00 43.79 3.69
3581 5194 1.393539 CGTAAGGCCAGTTCACAATCG 59.606 52.381 5.01 0.00 0.00 3.34
3586 5199 1.873698 TTGTCGTAAGGCCAGTTCAC 58.126 50.000 5.01 0.00 45.49 3.18
3591 5204 2.159627 GTGTGATTTGTCGTAAGGCCAG 59.840 50.000 5.01 0.00 45.49 4.85
3612 5225 3.012518 CCAGTTTATCAGAGGCACCTTG 58.987 50.000 0.00 0.00 0.00 3.61
3617 5230 3.776969 AGTCATCCAGTTTATCAGAGGCA 59.223 43.478 0.00 0.00 0.00 4.75
3618 5231 4.141846 TGAGTCATCCAGTTTATCAGAGGC 60.142 45.833 0.00 0.00 0.00 4.70
3630 5243 0.387202 CCGTAGGCTGAGTCATCCAG 59.613 60.000 15.24 6.08 46.14 3.86
3647 5260 2.228822 CCAATGAGAAAACAGGAACCCG 59.771 50.000 0.00 0.00 0.00 5.28
3664 5277 7.669722 ACCAGTATGACAAAACATAAGACCAAT 59.330 33.333 0.00 0.00 39.69 3.16
3671 5284 7.767261 GGCATAACCAGTATGACAAAACATAA 58.233 34.615 0.00 0.00 46.34 1.90
3672 5285 7.328277 GGCATAACCAGTATGACAAAACATA 57.672 36.000 0.00 0.00 46.34 2.29
3673 5286 6.207691 GGCATAACCAGTATGACAAAACAT 57.792 37.500 0.00 0.00 46.34 2.71
3674 5287 5.637006 GGCATAACCAGTATGACAAAACA 57.363 39.130 0.00 0.00 46.34 2.83
3688 5301 3.203716 CGGAGGAAGTTAAGGCATAACC 58.796 50.000 8.86 0.00 44.17 2.85
3708 5321 1.659794 CCAACCAGTTTCTTGGCCG 59.340 57.895 0.00 0.00 42.18 6.13
3727 5340 8.226819 TCTATCACAGAACATACAACCTAGAG 57.773 38.462 0.00 0.00 0.00 2.43
3738 5351 8.454106 GCAAACACTAATTCTATCACAGAACAT 58.546 33.333 0.00 0.00 46.01 2.71
3750 5363 6.122964 GGAGGGATTAGCAAACACTAATTCT 58.877 40.000 3.31 3.01 41.76 2.40
3767 5380 6.217487 TCCAAATTAATATGGATCGGAGGGAT 59.783 38.462 0.00 0.00 40.74 3.85
3804 5417 2.969821 AACAGTGGAGCATTGGGTAA 57.030 45.000 0.00 0.00 0.00 2.85
3812 5425 1.970640 TCTGAGCTAAACAGTGGAGCA 59.029 47.619 14.18 0.00 38.73 4.26
3815 5428 4.623932 AACATCTGAGCTAAACAGTGGA 57.376 40.909 0.00 0.00 36.81 4.02
3821 5434 7.459486 CACACAAGATAACATCTGAGCTAAAC 58.541 38.462 0.00 0.00 40.13 2.01
3830 5443 4.437794 CGCATTGCACACAAGATAACATCT 60.438 41.667 9.69 0.00 39.69 2.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.