Multiple sequence alignment - TraesCS3B01G505700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G505700 chr3B 100.000 2426 0 0 1 2426 749687586 749685161 0.000000e+00 4481.0
1 TraesCS3B01G505700 chr3B 99.240 526 4 0 1 526 39311965 39312490 0.000000e+00 950.0
2 TraesCS3B01G505700 chr3B 78.066 848 152 23 596 1435 749654077 749653256 2.780000e-139 505.0
3 TraesCS3B01G505700 chr3B 77.397 876 157 24 579 1435 763636369 763635516 1.300000e-132 483.0
4 TraesCS3B01G505700 chr3B 82.488 217 38 0 1981 2197 753867291 753867507 8.850000e-45 191.0
5 TraesCS3B01G505700 chr3B 78.571 98 10 8 600 687 755251061 755250965 1.000000e-03 54.7
6 TraesCS3B01G505700 chr3B 100.000 28 0 0 600 627 755236794 755236767 4.000000e-03 52.8
7 TraesCS3B01G505700 chr3D 92.263 1370 72 13 527 1888 562499471 562498128 0.000000e+00 1912.0
8 TraesCS3B01G505700 chr3D 91.195 477 31 5 1950 2426 562466205 562465740 2.630000e-179 638.0
9 TraesCS3B01G505700 chr3D 83.371 445 67 4 1982 2426 562420894 562420457 2.900000e-109 405.0
10 TraesCS3B01G505700 chr3D 84.762 210 32 0 1990 2199 565641909 565642118 6.800000e-51 211.0
11 TraesCS3B01G505700 chr3D 82.110 218 39 0 1982 2199 565830730 565830947 1.150000e-43 187.0
12 TraesCS3B01G505700 chr3D 78.571 98 10 6 600 687 567148082 567148178 1.000000e-03 54.7
13 TraesCS3B01G505700 chr3D 100.000 28 0 0 600 627 567091857 567091830 4.000000e-03 52.8
14 TraesCS3B01G505700 chr3D 100.000 28 0 0 600 627 569648058 569648031 4.000000e-03 52.8
15 TraesCS3B01G505700 chr3A 94.369 1101 53 4 527 1626 697596658 697595566 0.000000e+00 1681.0
16 TraesCS3B01G505700 chr3A 99.430 526 3 0 1 526 44602222 44602747 0.000000e+00 955.0
17 TraesCS3B01G505700 chr3A 92.018 451 22 5 1976 2426 697585536 697585100 2.650000e-174 621.0
18 TraesCS3B01G505700 chr3A 77.401 885 162 19 569 1435 708641274 708642138 2.170000e-135 492.0
19 TraesCS3B01G505700 chr3A 93.778 225 6 3 1668 1888 697595566 697595346 5.000000e-87 331.0
20 TraesCS3B01G505700 chr3A 81.860 215 36 2 1988 2199 655920285 655920499 6.890000e-41 178.0
21 TraesCS3B01G505700 chr7B 98.696 537 5 1 1 535 452491130 452491666 0.000000e+00 952.0
22 TraesCS3B01G505700 chr7B 99.057 530 4 1 1 530 474476593 474477121 0.000000e+00 950.0
23 TraesCS3B01G505700 chr7B 98.687 533 5 2 1 533 749655412 749655942 0.000000e+00 944.0
24 TraesCS3B01G505700 chr6A 98.687 533 5 2 1 533 169963898 169963368 0.000000e+00 944.0
25 TraesCS3B01G505700 chr5B 98.687 533 5 2 1 533 684204238 684204768 0.000000e+00 944.0
26 TraesCS3B01G505700 chr4B 98.687 533 5 2 1 533 53057542 53058072 0.000000e+00 944.0
27 TraesCS3B01G505700 chr1B 98.687 533 5 2 1 533 562222038 562222568 0.000000e+00 944.0
28 TraesCS3B01G505700 chr7D 90.786 369 25 4 1522 1888 227704707 227705068 3.630000e-133 484.0
29 TraesCS3B01G505700 chr4A 90.489 368 25 6 1523 1888 276001638 276001279 6.070000e-131 477.0
30 TraesCS3B01G505700 chr4A 82.381 210 33 3 1990 2197 611418672 611418465 1.920000e-41 180.0
31 TraesCS3B01G505700 chr2A 84.541 207 30 2 1992 2197 45080060 45080265 1.140000e-48 204.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G505700 chr3B 749685161 749687586 2425 True 4481 4481 100.0000 1 2426 1 chr3B.!!$R2 2425
1 TraesCS3B01G505700 chr3B 39311965 39312490 525 False 950 950 99.2400 1 526 1 chr3B.!!$F1 525
2 TraesCS3B01G505700 chr3B 749653256 749654077 821 True 505 505 78.0660 596 1435 1 chr3B.!!$R1 839
3 TraesCS3B01G505700 chr3B 763635516 763636369 853 True 483 483 77.3970 579 1435 1 chr3B.!!$R5 856
4 TraesCS3B01G505700 chr3D 562498128 562499471 1343 True 1912 1912 92.2630 527 1888 1 chr3D.!!$R3 1361
5 TraesCS3B01G505700 chr3A 697595346 697596658 1312 True 1006 1681 94.0735 527 1888 2 chr3A.!!$R2 1361
6 TraesCS3B01G505700 chr3A 44602222 44602747 525 False 955 955 99.4300 1 526 1 chr3A.!!$F1 525
7 TraesCS3B01G505700 chr3A 708641274 708642138 864 False 492 492 77.4010 569 1435 1 chr3A.!!$F3 866
8 TraesCS3B01G505700 chr7B 452491130 452491666 536 False 952 952 98.6960 1 535 1 chr7B.!!$F1 534
9 TraesCS3B01G505700 chr7B 474476593 474477121 528 False 950 950 99.0570 1 530 1 chr7B.!!$F2 529
10 TraesCS3B01G505700 chr7B 749655412 749655942 530 False 944 944 98.6870 1 533 1 chr7B.!!$F3 532
11 TraesCS3B01G505700 chr6A 169963368 169963898 530 True 944 944 98.6870 1 533 1 chr6A.!!$R1 532
12 TraesCS3B01G505700 chr5B 684204238 684204768 530 False 944 944 98.6870 1 533 1 chr5B.!!$F1 532
13 TraesCS3B01G505700 chr4B 53057542 53058072 530 False 944 944 98.6870 1 533 1 chr4B.!!$F1 532
14 TraesCS3B01G505700 chr1B 562222038 562222568 530 False 944 944 98.6870 1 533 1 chr1B.!!$F1 532

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
705 706 0.251165 CCGTTCCCTTTGGGTCATGT 60.251 55.0 2.25 0.0 44.74 3.21 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1943 1976 0.034476 TGAGCAGAGCAGGAGTTGTG 59.966 55.0 0.0 0.0 0.0 3.33 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
363 364 1.229400 ACTAAAGGTCCTCCGCCCA 60.229 57.895 0.00 0.00 39.05 5.36
664 665 0.464373 TCTTCATCTGCAATCCGGCC 60.464 55.000 0.00 0.00 0.00 6.13
689 690 2.442272 AGTATGCTCGCCTCCCGT 60.442 61.111 0.00 0.00 38.35 5.28
705 706 0.251165 CCGTTCCCTTTGGGTCATGT 60.251 55.000 2.25 0.00 44.74 3.21
1157 1179 0.248215 CGCAGGATTGAATTGCCGTC 60.248 55.000 0.00 0.00 34.42 4.79
1172 1194 1.039785 CCGTCTGCAGAGATCAGGGA 61.040 60.000 18.89 0.00 32.63 4.20
1233 1255 0.694771 ATGTGACTGTCATGCCAGGT 59.305 50.000 14.37 0.00 36.75 4.00
1269 1291 2.124122 GTGTTGGTCAAATTTGCCGAC 58.876 47.619 27.86 27.86 38.31 4.79
1306 1328 1.752498 GCATGGATGGCAAGTTGATCA 59.248 47.619 7.16 4.42 0.00 2.92
1334 1356 4.687901 TCCATCGCAAAGGATTAGATCA 57.312 40.909 0.00 0.00 0.00 2.92
1463 1485 6.293298 CCTCAAGAGCTGCAATATGTATGAAC 60.293 42.308 1.02 0.00 0.00 3.18
1570 1598 6.000246 TGCTTGTGTTGATATCCTTCCATA 58.000 37.500 0.00 0.00 0.00 2.74
1572 1600 5.239525 GCTTGTGTTGATATCCTTCCATACC 59.760 44.000 0.00 0.00 0.00 2.73
1647 1676 3.064682 TGCGCGTTTGAAATATGTGCTAT 59.935 39.130 8.43 0.00 38.50 2.97
1653 1682 6.412072 GCGTTTGAAATATGTGCTATCTGTTC 59.588 38.462 0.00 0.00 0.00 3.18
1658 1687 7.436933 TGAAATATGTGCTATCTGTTCGATCT 58.563 34.615 0.00 0.00 33.48 2.75
1659 1688 7.383300 TGAAATATGTGCTATCTGTTCGATCTG 59.617 37.037 0.00 0.00 33.48 2.90
1660 1689 4.662468 ATGTGCTATCTGTTCGATCTGT 57.338 40.909 0.00 0.00 33.48 3.41
1766 1799 1.757682 TCCAAGCGTGTTGTTTCCTT 58.242 45.000 0.00 0.00 0.00 3.36
1808 1841 5.447818 GCTGACTAATAAATGTGTGGCAGTC 60.448 44.000 0.00 0.00 33.43 3.51
1809 1842 5.555966 TGACTAATAAATGTGTGGCAGTCA 58.444 37.500 0.00 0.00 38.95 3.41
1810 1843 5.643348 TGACTAATAAATGTGTGGCAGTCAG 59.357 40.000 0.00 0.00 36.99 3.51
1811 1844 5.560724 ACTAATAAATGTGTGGCAGTCAGT 58.439 37.500 0.00 0.00 0.00 3.41
1818 1851 2.084546 GTGTGGCAGTCAGTTTATCCC 58.915 52.381 0.00 0.00 0.00 3.85
1888 1921 2.189342 GCTAGCTAGTTCACTTGAGCG 58.811 52.381 21.62 0.00 39.96 5.03
1889 1922 2.189342 CTAGCTAGTTCACTTGAGCGC 58.811 52.381 12.92 0.00 39.96 5.92
1890 1923 0.734253 AGCTAGTTCACTTGAGCGCG 60.734 55.000 0.00 0.00 39.96 6.86
1891 1924 1.009389 GCTAGTTCACTTGAGCGCGT 61.009 55.000 8.43 0.00 0.00 6.01
1892 1925 0.710567 CTAGTTCACTTGAGCGCGTG 59.289 55.000 8.43 3.98 0.00 5.34
1893 1926 1.282248 TAGTTCACTTGAGCGCGTGC 61.282 55.000 14.39 14.39 43.24 5.34
1894 1927 2.587473 TTCACTTGAGCGCGTGCA 60.587 55.556 24.79 2.99 46.23 4.57
1895 1928 1.960763 TTCACTTGAGCGCGTGCAT 60.961 52.632 24.79 8.25 46.23 3.96
1896 1929 0.669012 TTCACTTGAGCGCGTGCATA 60.669 50.000 24.79 8.51 46.23 3.14
1897 1930 0.460109 TCACTTGAGCGCGTGCATAT 60.460 50.000 24.79 1.39 46.23 1.78
1898 1931 0.374758 CACTTGAGCGCGTGCATATT 59.625 50.000 24.79 0.93 46.23 1.28
1899 1932 1.592543 CACTTGAGCGCGTGCATATTA 59.407 47.619 24.79 0.95 46.23 0.98
1900 1933 1.860950 ACTTGAGCGCGTGCATATTAG 59.139 47.619 24.79 14.22 46.23 1.73
1901 1934 2.127251 CTTGAGCGCGTGCATATTAGA 58.873 47.619 24.79 0.53 46.23 2.10
1902 1935 2.438868 TGAGCGCGTGCATATTAGAT 57.561 45.000 24.79 0.00 46.23 1.98
1903 1936 2.754472 TGAGCGCGTGCATATTAGATT 58.246 42.857 24.79 0.00 46.23 2.40
1904 1937 2.731451 TGAGCGCGTGCATATTAGATTC 59.269 45.455 24.79 8.89 46.23 2.52
1905 1938 2.069273 AGCGCGTGCATATTAGATTCC 58.931 47.619 24.79 0.00 46.23 3.01
1906 1939 1.201812 GCGCGTGCATATTAGATTCCG 60.202 52.381 17.66 0.00 42.15 4.30
1907 1940 2.058798 CGCGTGCATATTAGATTCCGT 58.941 47.619 0.00 0.00 0.00 4.69
1908 1941 2.159973 CGCGTGCATATTAGATTCCGTG 60.160 50.000 0.00 0.00 0.00 4.94
1909 1942 3.057019 GCGTGCATATTAGATTCCGTGA 58.943 45.455 0.00 0.00 0.00 4.35
1910 1943 3.493129 GCGTGCATATTAGATTCCGTGAA 59.507 43.478 0.00 0.00 0.00 3.18
1911 1944 4.025229 GCGTGCATATTAGATTCCGTGAAA 60.025 41.667 0.00 0.00 0.00 2.69
1912 1945 5.670097 CGTGCATATTAGATTCCGTGAAAG 58.330 41.667 0.00 0.00 0.00 2.62
1913 1946 5.462068 CGTGCATATTAGATTCCGTGAAAGA 59.538 40.000 0.00 0.00 0.00 2.52
1914 1947 6.346120 CGTGCATATTAGATTCCGTGAAAGAG 60.346 42.308 0.00 0.00 0.00 2.85
1915 1948 5.991606 TGCATATTAGATTCCGTGAAAGAGG 59.008 40.000 0.00 0.00 0.00 3.69
1916 1949 6.183360 TGCATATTAGATTCCGTGAAAGAGGA 60.183 38.462 0.00 0.00 34.19 3.71
1921 1954 2.833631 TTCCGTGAAAGAGGAAGACC 57.166 50.000 0.00 0.00 41.19 3.85
1931 1964 3.592546 AGGAAGACCTAGACCGACC 57.407 57.895 0.00 0.00 45.83 4.79
1932 1965 1.001282 AGGAAGACCTAGACCGACCT 58.999 55.000 0.00 0.00 45.83 3.85
1933 1966 1.064537 AGGAAGACCTAGACCGACCTC 60.065 57.143 0.00 0.00 45.83 3.85
1934 1967 1.391577 GAAGACCTAGACCGACCTCC 58.608 60.000 0.00 0.00 0.00 4.30
1935 1968 0.394080 AAGACCTAGACCGACCTCCG 60.394 60.000 0.00 0.00 38.18 4.63
1952 1985 4.681978 GGCGCCGTCACAACTCCT 62.682 66.667 12.58 0.00 0.00 3.69
1953 1986 3.414700 GCGCCGTCACAACTCCTG 61.415 66.667 0.00 0.00 0.00 3.86
1954 1987 3.414700 CGCCGTCACAACTCCTGC 61.415 66.667 0.00 0.00 0.00 4.85
1955 1988 2.031163 GCCGTCACAACTCCTGCT 59.969 61.111 0.00 0.00 0.00 4.24
1956 1989 2.029844 GCCGTCACAACTCCTGCTC 61.030 63.158 0.00 0.00 0.00 4.26
1957 1990 1.668294 CCGTCACAACTCCTGCTCT 59.332 57.895 0.00 0.00 0.00 4.09
1958 1991 0.668706 CCGTCACAACTCCTGCTCTG 60.669 60.000 0.00 0.00 0.00 3.35
1959 1992 1.287730 CGTCACAACTCCTGCTCTGC 61.288 60.000 0.00 0.00 0.00 4.26
1960 1993 0.034616 GTCACAACTCCTGCTCTGCT 59.965 55.000 0.00 0.00 0.00 4.24
1961 1994 0.319728 TCACAACTCCTGCTCTGCTC 59.680 55.000 0.00 0.00 0.00 4.26
1962 1995 0.034476 CACAACTCCTGCTCTGCTCA 59.966 55.000 0.00 0.00 0.00 4.26
1963 1996 0.982704 ACAACTCCTGCTCTGCTCAT 59.017 50.000 0.00 0.00 0.00 2.90
1964 1997 1.338864 ACAACTCCTGCTCTGCTCATG 60.339 52.381 0.00 0.00 0.00 3.07
1965 1998 0.252479 AACTCCTGCTCTGCTCATGG 59.748 55.000 0.00 0.00 0.00 3.66
1966 1999 1.146485 CTCCTGCTCTGCTCATGGG 59.854 63.158 0.00 0.00 0.00 4.00
1967 2000 1.306397 TCCTGCTCTGCTCATGGGA 60.306 57.895 0.00 0.00 0.00 4.37
1968 2001 1.153208 CCTGCTCTGCTCATGGGAC 60.153 63.158 0.00 0.00 0.00 4.46
1981 2014 3.298320 TGGGACAGATCGATCCACA 57.702 52.632 21.66 11.17 36.65 4.17
1982 2015 1.114627 TGGGACAGATCGATCCACAG 58.885 55.000 21.66 11.74 36.65 3.66
1983 2016 0.249657 GGGACAGATCGATCCACAGC 60.250 60.000 21.66 7.22 36.65 4.40
1984 2017 0.749649 GGACAGATCGATCCACAGCT 59.250 55.000 21.66 0.00 34.87 4.24
1985 2018 1.269517 GGACAGATCGATCCACAGCTC 60.270 57.143 21.66 7.28 34.87 4.09
1986 2019 1.680735 GACAGATCGATCCACAGCTCT 59.319 52.381 21.66 0.00 0.00 4.09
1987 2020 1.680735 ACAGATCGATCCACAGCTCTC 59.319 52.381 21.66 0.00 0.00 3.20
1988 2021 1.680207 CAGATCGATCCACAGCTCTCA 59.320 52.381 21.66 0.00 0.00 3.27
1989 2022 1.955778 AGATCGATCCACAGCTCTCAG 59.044 52.381 21.66 0.00 0.00 3.35
1990 2023 0.388659 ATCGATCCACAGCTCTCAGC 59.611 55.000 0.00 0.00 42.84 4.26
1991 2024 1.227205 CGATCCACAGCTCTCAGCC 60.227 63.158 0.00 0.00 43.77 4.85
1992 2025 1.227205 GATCCACAGCTCTCAGCCG 60.227 63.158 0.00 0.00 43.77 5.52
1993 2026 2.641439 GATCCACAGCTCTCAGCCGG 62.641 65.000 0.00 0.00 43.77 6.13
2000 2033 3.842923 CTCTCAGCCGGCGACCAT 61.843 66.667 23.20 0.00 0.00 3.55
2001 2034 4.147449 TCTCAGCCGGCGACCATG 62.147 66.667 23.20 14.04 0.00 3.66
2035 2068 4.821589 CAGGAGCGACGCCTTCCC 62.822 72.222 20.88 15.04 29.38 3.97
2037 2070 4.516195 GGAGCGACGCCTTCCCTC 62.516 72.222 17.79 6.06 0.00 4.30
2038 2071 4.856607 GAGCGACGCCTTCCCTCG 62.857 72.222 17.79 0.00 0.00 4.63
2041 2074 4.796231 CGACGCCTTCCCTCGGTG 62.796 72.222 0.00 0.00 38.02 4.94
2042 2075 4.452733 GACGCCTTCCCTCGGTGG 62.453 72.222 0.00 0.00 36.37 4.61
2044 2077 4.452733 CGCCTTCCCTCGGTGGTC 62.453 72.222 0.00 0.00 0.00 4.02
2045 2078 3.003763 GCCTTCCCTCGGTGGTCT 61.004 66.667 0.00 0.00 0.00 3.85
2046 2079 3.020237 GCCTTCCCTCGGTGGTCTC 62.020 68.421 0.00 0.00 0.00 3.36
2047 2080 2.359967 CCTTCCCTCGGTGGTCTCC 61.360 68.421 0.00 0.00 0.00 3.71
2048 2081 1.305381 CTTCCCTCGGTGGTCTCCT 60.305 63.158 0.00 0.00 0.00 3.69
2049 2082 1.608717 CTTCCCTCGGTGGTCTCCTG 61.609 65.000 0.00 0.00 0.00 3.86
2050 2083 3.077556 CCCTCGGTGGTCTCCTGG 61.078 72.222 0.00 0.00 0.00 4.45
2051 2084 2.037367 CCTCGGTGGTCTCCTGGA 59.963 66.667 0.00 0.00 0.00 3.86
2052 2085 2.055042 CCTCGGTGGTCTCCTGGAG 61.055 68.421 17.84 17.84 0.00 3.86
2053 2086 2.037367 TCGGTGGTCTCCTGGAGG 59.963 66.667 23.00 6.47 0.00 4.30
2054 2087 2.037367 CGGTGGTCTCCTGGAGGA 59.963 66.667 23.00 7.72 43.08 3.71
2064 2097 1.988293 TCCTGGAGGAGATCGTCATC 58.012 55.000 0.00 0.00 39.78 2.92
2065 2098 1.496857 TCCTGGAGGAGATCGTCATCT 59.503 52.381 0.00 0.00 42.59 2.90
2066 2099 1.612950 CCTGGAGGAGATCGTCATCTG 59.387 57.143 5.05 2.40 39.71 2.90
2067 2100 1.612950 CTGGAGGAGATCGTCATCTGG 59.387 57.143 5.05 0.00 39.71 3.86
2068 2101 0.965439 GGAGGAGATCGTCATCTGGG 59.035 60.000 5.05 0.00 39.71 4.45
2069 2102 1.479573 GGAGGAGATCGTCATCTGGGA 60.480 57.143 5.05 0.00 39.71 4.37
2070 2103 1.885887 GAGGAGATCGTCATCTGGGAG 59.114 57.143 0.00 0.00 39.71 4.30
2071 2104 1.496857 AGGAGATCGTCATCTGGGAGA 59.503 52.381 0.00 0.00 39.71 3.71
2072 2105 2.109834 AGGAGATCGTCATCTGGGAGAT 59.890 50.000 0.00 0.00 39.71 2.75
2073 2106 2.491693 GGAGATCGTCATCTGGGAGATC 59.508 54.545 0.00 0.00 39.71 2.75
2074 2107 2.491693 GAGATCGTCATCTGGGAGATCC 59.508 54.545 0.00 0.00 39.71 3.36
2075 2108 2.109834 AGATCGTCATCTGGGAGATCCT 59.890 50.000 0.00 0.00 38.03 3.24
2076 2109 1.988293 TCGTCATCTGGGAGATCCTC 58.012 55.000 0.00 0.00 31.32 3.71
2077 2110 0.595588 CGTCATCTGGGAGATCCTCG 59.404 60.000 0.00 0.00 31.32 4.63
2078 2111 1.698506 GTCATCTGGGAGATCCTCGT 58.301 55.000 0.00 0.00 31.32 4.18
2079 2112 1.611491 GTCATCTGGGAGATCCTCGTC 59.389 57.143 0.00 0.00 31.32 4.20
2080 2113 0.965439 CATCTGGGAGATCCTCGTCC 59.035 60.000 0.00 0.00 31.32 4.79
2081 2114 0.538516 ATCTGGGAGATCCTCGTCCG 60.539 60.000 0.00 0.00 36.20 4.79
2082 2115 2.833582 TGGGAGATCCTCGTCCGC 60.834 66.667 0.00 0.00 36.20 5.54
2083 2116 2.519780 GGGAGATCCTCGTCCGCT 60.520 66.667 0.00 0.00 33.13 5.52
2084 2117 2.128507 GGGAGATCCTCGTCCGCTT 61.129 63.158 0.00 0.00 33.13 4.68
2085 2118 1.066587 GGAGATCCTCGTCCGCTTG 59.933 63.158 0.00 0.00 0.00 4.01
2086 2119 1.590259 GAGATCCTCGTCCGCTTGC 60.590 63.158 0.00 0.00 0.00 4.01
2087 2120 2.586357 GATCCTCGTCCGCTTGCC 60.586 66.667 0.00 0.00 0.00 4.52
2088 2121 4.162690 ATCCTCGTCCGCTTGCCC 62.163 66.667 0.00 0.00 0.00 5.36
2095 2128 4.715523 TCCGCTTGCCCCCGAAAG 62.716 66.667 0.00 0.00 0.00 2.62
2099 2132 4.366684 CTTGCCCCCGAAAGCCCT 62.367 66.667 0.00 0.00 0.00 5.19
2100 2133 4.360405 TTGCCCCCGAAAGCCCTC 62.360 66.667 0.00 0.00 0.00 4.30
2103 2136 3.798511 CCCCCGAAAGCCCTCCTC 61.799 72.222 0.00 0.00 0.00 3.71
2104 2137 3.798511 CCCCGAAAGCCCTCCTCC 61.799 72.222 0.00 0.00 0.00 4.30
2105 2138 4.162690 CCCGAAAGCCCTCCTCCG 62.163 72.222 0.00 0.00 0.00 4.63
2106 2139 4.840005 CCGAAAGCCCTCCTCCGC 62.840 72.222 0.00 0.00 0.00 5.54
2107 2140 3.775654 CGAAAGCCCTCCTCCGCT 61.776 66.667 0.00 0.00 36.74 5.52
2108 2141 2.124942 GAAAGCCCTCCTCCGCTG 60.125 66.667 0.00 0.00 34.94 5.18
2109 2142 4.416738 AAAGCCCTCCTCCGCTGC 62.417 66.667 0.00 0.00 34.94 5.25
2140 2173 2.047274 GCTCCTGGCGCAGTGTAA 60.047 61.111 10.83 0.00 0.00 2.41
2141 2174 2.391389 GCTCCTGGCGCAGTGTAAC 61.391 63.158 10.83 0.00 0.00 2.50
2142 2175 1.741770 CTCCTGGCGCAGTGTAACC 60.742 63.158 10.83 0.00 37.80 2.85
2143 2176 2.172483 CTCCTGGCGCAGTGTAACCT 62.172 60.000 10.83 0.00 37.80 3.50
2144 2177 1.741770 CCTGGCGCAGTGTAACCTC 60.742 63.158 10.83 0.00 37.80 3.85
2145 2178 1.741770 CTGGCGCAGTGTAACCTCC 60.742 63.158 10.83 0.00 37.80 4.30
2146 2179 2.345991 GGCGCAGTGTAACCTCCA 59.654 61.111 10.83 0.00 37.80 3.86
2147 2180 2.033194 GGCGCAGTGTAACCTCCAC 61.033 63.158 10.83 0.00 37.80 4.02
2148 2181 2.033194 GCGCAGTGTAACCTCCACC 61.033 63.158 0.30 0.00 37.80 4.61
2149 2182 1.375523 CGCAGTGTAACCTCCACCC 60.376 63.158 0.00 0.00 37.80 4.61
2150 2183 1.758592 GCAGTGTAACCTCCACCCA 59.241 57.895 0.00 0.00 37.80 4.51
2151 2184 0.328258 GCAGTGTAACCTCCACCCAT 59.672 55.000 0.00 0.00 37.80 4.00
2152 2185 1.557832 GCAGTGTAACCTCCACCCATA 59.442 52.381 0.00 0.00 37.80 2.74
2153 2186 2.026636 GCAGTGTAACCTCCACCCATAA 60.027 50.000 0.00 0.00 37.80 1.90
2154 2187 3.606687 CAGTGTAACCTCCACCCATAAC 58.393 50.000 0.00 0.00 37.80 1.89
2155 2188 3.263425 CAGTGTAACCTCCACCCATAACT 59.737 47.826 0.00 0.00 37.80 2.24
2156 2189 3.914435 AGTGTAACCTCCACCCATAACTT 59.086 43.478 0.00 0.00 37.80 2.66
2157 2190 4.352893 AGTGTAACCTCCACCCATAACTTT 59.647 41.667 0.00 0.00 37.80 2.66
2158 2191 4.698780 GTGTAACCTCCACCCATAACTTTC 59.301 45.833 0.00 0.00 0.00 2.62
2159 2192 4.600111 TGTAACCTCCACCCATAACTTTCT 59.400 41.667 0.00 0.00 0.00 2.52
2160 2193 4.302559 AACCTCCACCCATAACTTTCTC 57.697 45.455 0.00 0.00 0.00 2.87
2161 2194 2.576648 ACCTCCACCCATAACTTTCTCC 59.423 50.000 0.00 0.00 0.00 3.71
2162 2195 2.846827 CCTCCACCCATAACTTTCTCCT 59.153 50.000 0.00 0.00 0.00 3.69
2163 2196 3.118223 CCTCCACCCATAACTTTCTCCTC 60.118 52.174 0.00 0.00 0.00 3.71
2164 2197 2.500098 TCCACCCATAACTTTCTCCTCG 59.500 50.000 0.00 0.00 0.00 4.63
2165 2198 2.280628 CACCCATAACTTTCTCCTCGC 58.719 52.381 0.00 0.00 0.00 5.03
2166 2199 2.093447 CACCCATAACTTTCTCCTCGCT 60.093 50.000 0.00 0.00 0.00 4.93
2167 2200 2.168728 ACCCATAACTTTCTCCTCGCTC 59.831 50.000 0.00 0.00 0.00 5.03
2168 2201 2.168521 CCCATAACTTTCTCCTCGCTCA 59.831 50.000 0.00 0.00 0.00 4.26
2169 2202 3.190874 CCATAACTTTCTCCTCGCTCAC 58.809 50.000 0.00 0.00 0.00 3.51
2170 2203 3.190874 CATAACTTTCTCCTCGCTCACC 58.809 50.000 0.00 0.00 0.00 4.02
2171 2204 1.048601 AACTTTCTCCTCGCTCACCA 58.951 50.000 0.00 0.00 0.00 4.17
2172 2205 0.318762 ACTTTCTCCTCGCTCACCAC 59.681 55.000 0.00 0.00 0.00 4.16
2173 2206 0.734253 CTTTCTCCTCGCTCACCACG 60.734 60.000 0.00 0.00 0.00 4.94
2174 2207 2.765250 TTTCTCCTCGCTCACCACGC 62.765 60.000 0.00 0.00 0.00 5.34
2175 2208 4.803426 CTCCTCGCTCACCACGCC 62.803 72.222 0.00 0.00 0.00 5.68
2178 2211 4.803426 CTCGCTCACCACGCCCTC 62.803 72.222 0.00 0.00 0.00 4.30
2181 2214 4.767255 GCTCACCACGCCCTCCAG 62.767 72.222 0.00 0.00 0.00 3.86
2182 2215 4.767255 CTCACCACGCCCTCCAGC 62.767 72.222 0.00 0.00 0.00 4.85
2199 2232 3.779083 CCTGCCCTCCCCCTCCTA 61.779 72.222 0.00 0.00 0.00 2.94
2200 2233 2.122636 CTGCCCTCCCCCTCCTAG 60.123 72.222 0.00 0.00 0.00 3.02
2201 2234 2.623763 TGCCCTCCCCCTCCTAGA 60.624 66.667 0.00 0.00 0.00 2.43
2202 2235 2.122769 GCCCTCCCCCTCCTAGAC 60.123 72.222 0.00 0.00 0.00 2.59
2203 2236 3.023045 GCCCTCCCCCTCCTAGACA 62.023 68.421 0.00 0.00 0.00 3.41
2204 2237 1.710341 CCCTCCCCCTCCTAGACAA 59.290 63.158 0.00 0.00 0.00 3.18
2205 2238 0.691413 CCCTCCCCCTCCTAGACAAC 60.691 65.000 0.00 0.00 0.00 3.32
2206 2239 1.043673 CCTCCCCCTCCTAGACAACG 61.044 65.000 0.00 0.00 0.00 4.10
2207 2240 1.001248 TCCCCCTCCTAGACAACGG 59.999 63.158 0.00 0.00 0.00 4.44
2208 2241 2.732619 CCCCCTCCTAGACAACGGC 61.733 68.421 0.00 0.00 0.00 5.68
2209 2242 2.494918 CCCTCCTAGACAACGGCG 59.505 66.667 4.80 4.80 0.00 6.46
2210 2243 2.050350 CCCTCCTAGACAACGGCGA 61.050 63.158 16.62 0.00 0.00 5.54
2211 2244 1.392710 CCCTCCTAGACAACGGCGAT 61.393 60.000 16.62 0.00 0.00 4.58
2212 2245 0.460311 CCTCCTAGACAACGGCGATT 59.540 55.000 16.62 0.55 0.00 3.34
2213 2246 1.679680 CCTCCTAGACAACGGCGATTA 59.320 52.381 16.62 0.00 0.00 1.75
2214 2247 2.296471 CCTCCTAGACAACGGCGATTAT 59.704 50.000 16.62 0.00 0.00 1.28
2215 2248 3.504906 CCTCCTAGACAACGGCGATTATA 59.495 47.826 16.62 0.00 0.00 0.98
2216 2249 4.158025 CCTCCTAGACAACGGCGATTATAT 59.842 45.833 16.62 0.00 0.00 0.86
2217 2250 5.356190 CCTCCTAGACAACGGCGATTATATA 59.644 44.000 16.62 0.00 0.00 0.86
2218 2251 6.432607 TCCTAGACAACGGCGATTATATAG 57.567 41.667 16.62 8.24 0.00 1.31
2219 2252 6.175471 TCCTAGACAACGGCGATTATATAGA 58.825 40.000 16.62 0.00 0.00 1.98
2220 2253 6.093219 TCCTAGACAACGGCGATTATATAGAC 59.907 42.308 16.62 0.00 0.00 2.59
2221 2254 5.056894 AGACAACGGCGATTATATAGACC 57.943 43.478 16.62 0.00 0.00 3.85
2222 2255 4.765856 AGACAACGGCGATTATATAGACCT 59.234 41.667 16.62 0.00 0.00 3.85
2223 2256 5.056894 ACAACGGCGATTATATAGACCTC 57.943 43.478 16.62 0.00 0.00 3.85
2224 2257 4.521639 ACAACGGCGATTATATAGACCTCA 59.478 41.667 16.62 0.00 0.00 3.86
2225 2258 5.185249 ACAACGGCGATTATATAGACCTCAT 59.815 40.000 16.62 0.00 0.00 2.90
2226 2259 5.916661 ACGGCGATTATATAGACCTCATT 57.083 39.130 16.62 0.00 0.00 2.57
2227 2260 7.094075 ACAACGGCGATTATATAGACCTCATTA 60.094 37.037 16.62 0.00 0.00 1.90
2228 2261 7.400599 ACGGCGATTATATAGACCTCATTAA 57.599 36.000 16.62 0.00 0.00 1.40
2229 2262 7.256286 ACGGCGATTATATAGACCTCATTAAC 58.744 38.462 16.62 0.00 0.00 2.01
2230 2263 6.414109 CGGCGATTATATAGACCTCATTAACG 59.586 42.308 0.00 0.00 0.00 3.18
2231 2264 7.478322 GGCGATTATATAGACCTCATTAACGA 58.522 38.462 0.00 0.00 0.00 3.85
2232 2265 7.431668 GGCGATTATATAGACCTCATTAACGAC 59.568 40.741 0.00 0.00 0.00 4.34
2233 2266 8.182881 GCGATTATATAGACCTCATTAACGACT 58.817 37.037 0.00 0.00 0.00 4.18
2234 2267 9.705471 CGATTATATAGACCTCATTAACGACTC 57.295 37.037 0.00 0.00 0.00 3.36
2236 2269 8.929260 TTATATAGACCTCATTAACGACTCCA 57.071 34.615 0.00 0.00 0.00 3.86
2237 2270 9.529823 TTATATAGACCTCATTAACGACTCCAT 57.470 33.333 0.00 0.00 0.00 3.41
2239 2272 5.776173 AGACCTCATTAACGACTCCATAG 57.224 43.478 0.00 0.00 0.00 2.23
2240 2273 5.446860 AGACCTCATTAACGACTCCATAGA 58.553 41.667 0.00 0.00 0.00 1.98
2241 2274 5.299782 AGACCTCATTAACGACTCCATAGAC 59.700 44.000 0.00 0.00 0.00 2.59
2242 2275 4.954202 ACCTCATTAACGACTCCATAGACA 59.046 41.667 0.00 0.00 0.00 3.41
2243 2276 5.598830 ACCTCATTAACGACTCCATAGACAT 59.401 40.000 0.00 0.00 0.00 3.06
2244 2277 6.153067 CCTCATTAACGACTCCATAGACATC 58.847 44.000 0.00 0.00 0.00 3.06
2245 2278 6.015856 CCTCATTAACGACTCCATAGACATCT 60.016 42.308 0.00 0.00 0.00 2.90
2246 2279 6.739112 TCATTAACGACTCCATAGACATCTG 58.261 40.000 0.00 0.00 0.00 2.90
2247 2280 3.444703 AACGACTCCATAGACATCTGC 57.555 47.619 0.00 0.00 0.00 4.26
2248 2281 2.660572 ACGACTCCATAGACATCTGCT 58.339 47.619 0.00 0.00 0.00 4.24
2249 2282 2.360483 ACGACTCCATAGACATCTGCTG 59.640 50.000 0.00 0.00 0.00 4.41
2250 2283 2.753296 GACTCCATAGACATCTGCTGC 58.247 52.381 0.00 0.00 0.00 5.25
2251 2284 2.364970 GACTCCATAGACATCTGCTGCT 59.635 50.000 0.00 0.00 0.00 4.24
2252 2285 2.770802 ACTCCATAGACATCTGCTGCTT 59.229 45.455 0.00 0.00 0.00 3.91
2253 2286 3.132160 CTCCATAGACATCTGCTGCTTG 58.868 50.000 0.00 0.00 0.00 4.01
2254 2287 2.767960 TCCATAGACATCTGCTGCTTGA 59.232 45.455 0.00 0.00 0.00 3.02
2255 2288 3.198417 TCCATAGACATCTGCTGCTTGAA 59.802 43.478 0.00 0.00 0.00 2.69
2256 2289 3.311871 CCATAGACATCTGCTGCTTGAAC 59.688 47.826 0.00 0.00 0.00 3.18
2257 2290 2.556144 AGACATCTGCTGCTTGAACA 57.444 45.000 0.00 0.00 0.00 3.18
2258 2291 2.854963 AGACATCTGCTGCTTGAACAA 58.145 42.857 0.00 0.00 0.00 2.83
2259 2292 3.418995 AGACATCTGCTGCTTGAACAAT 58.581 40.909 0.00 0.00 0.00 2.71
2260 2293 3.439476 AGACATCTGCTGCTTGAACAATC 59.561 43.478 0.00 0.00 0.00 2.67
2261 2294 2.161012 ACATCTGCTGCTTGAACAATCG 59.839 45.455 0.00 0.00 0.00 3.34
2262 2295 1.159285 TCTGCTGCTTGAACAATCGG 58.841 50.000 0.00 0.00 0.00 4.18
2263 2296 0.455633 CTGCTGCTTGAACAATCGGC 60.456 55.000 13.13 13.13 38.79 5.54
2264 2297 1.153958 GCTGCTTGAACAATCGGCC 60.154 57.895 10.01 0.00 33.90 6.13
2265 2298 1.865788 GCTGCTTGAACAATCGGCCA 61.866 55.000 2.24 0.00 33.90 5.36
2266 2299 0.169672 CTGCTTGAACAATCGGCCAG 59.830 55.000 2.24 0.00 0.00 4.85
2267 2300 1.243342 TGCTTGAACAATCGGCCAGG 61.243 55.000 2.24 0.00 0.00 4.45
2268 2301 1.244019 GCTTGAACAATCGGCCAGGT 61.244 55.000 2.24 0.00 0.00 4.00
2269 2302 0.804989 CTTGAACAATCGGCCAGGTC 59.195 55.000 2.24 0.00 0.00 3.85
2270 2303 0.400213 TTGAACAATCGGCCAGGTCT 59.600 50.000 2.24 0.00 0.00 3.85
2271 2304 0.321564 TGAACAATCGGCCAGGTCTG 60.322 55.000 2.24 0.00 0.00 3.51
2290 2323 4.394712 CCGCCCCTGACCAGTCAC 62.395 72.222 0.00 0.00 35.46 3.67
2291 2324 4.394712 CGCCCCTGACCAGTCACC 62.395 72.222 0.00 0.00 35.46 4.02
2292 2325 3.249189 GCCCCTGACCAGTCACCA 61.249 66.667 0.00 0.00 35.46 4.17
2293 2326 3.072476 CCCCTGACCAGTCACCAG 58.928 66.667 0.00 0.00 35.46 4.00
2294 2327 2.348998 CCCTGACCAGTCACCAGC 59.651 66.667 0.00 0.00 35.46 4.85
2295 2328 2.219875 CCCTGACCAGTCACCAGCT 61.220 63.158 0.00 0.00 35.46 4.24
2296 2329 1.294780 CCTGACCAGTCACCAGCTC 59.705 63.158 0.00 0.00 35.46 4.09
2297 2330 1.294780 CTGACCAGTCACCAGCTCC 59.705 63.158 0.00 0.00 35.46 4.70
2298 2331 1.459348 TGACCAGTCACCAGCTCCA 60.459 57.895 0.00 0.00 34.14 3.86
2299 2332 1.294780 GACCAGTCACCAGCTCCAG 59.705 63.158 0.00 0.00 0.00 3.86
2300 2333 1.460305 ACCAGTCACCAGCTCCAGT 60.460 57.895 0.00 0.00 0.00 4.00
2301 2334 1.294780 CCAGTCACCAGCTCCAGTC 59.705 63.158 0.00 0.00 0.00 3.51
2302 2335 1.294780 CAGTCACCAGCTCCAGTCC 59.705 63.158 0.00 0.00 0.00 3.85
2303 2336 2.262915 GTCACCAGCTCCAGTCCG 59.737 66.667 0.00 0.00 0.00 4.79
2304 2337 2.203640 TCACCAGCTCCAGTCCGT 60.204 61.111 0.00 0.00 0.00 4.69
2305 2338 2.262915 CACCAGCTCCAGTCCGTC 59.737 66.667 0.00 0.00 0.00 4.79
2306 2339 3.374402 ACCAGCTCCAGTCCGTCG 61.374 66.667 0.00 0.00 0.00 5.12
2307 2340 4.803426 CCAGCTCCAGTCCGTCGC 62.803 72.222 0.00 0.00 0.00 5.19
2308 2341 4.803426 CAGCTCCAGTCCGTCGCC 62.803 72.222 0.00 0.00 0.00 5.54
2310 2343 4.803426 GCTCCAGTCCGTCGCCTG 62.803 72.222 3.82 3.82 0.00 4.85
2311 2344 3.062466 CTCCAGTCCGTCGCCTGA 61.062 66.667 10.64 0.00 0.00 3.86
2312 2345 2.362503 TCCAGTCCGTCGCCTGAT 60.363 61.111 10.64 0.00 0.00 2.90
2313 2346 1.949847 CTCCAGTCCGTCGCCTGATT 61.950 60.000 10.64 0.00 0.00 2.57
2314 2347 1.811266 CCAGTCCGTCGCCTGATTG 60.811 63.158 10.64 0.00 0.00 2.67
2315 2348 1.215382 CAGTCCGTCGCCTGATTGA 59.785 57.895 4.62 0.00 0.00 2.57
2316 2349 0.389817 CAGTCCGTCGCCTGATTGAA 60.390 55.000 4.62 0.00 0.00 2.69
2317 2350 0.537188 AGTCCGTCGCCTGATTGAAT 59.463 50.000 0.00 0.00 0.00 2.57
2318 2351 0.931005 GTCCGTCGCCTGATTGAATC 59.069 55.000 0.00 0.00 0.00 2.52
2319 2352 0.824109 TCCGTCGCCTGATTGAATCT 59.176 50.000 6.73 0.00 0.00 2.40
2320 2353 0.933097 CCGTCGCCTGATTGAATCTG 59.067 55.000 6.73 5.92 0.00 2.90
2322 2355 1.303309 GTCGCCTGATTGAATCTGGG 58.697 55.000 25.94 18.59 45.45 4.45
2323 2356 0.464373 TCGCCTGATTGAATCTGGGC 60.464 55.000 25.94 24.27 45.45 5.36
2324 2357 2.028130 GCCTGATTGAATCTGGGCG 58.972 57.895 25.94 7.56 45.45 6.13
2325 2358 1.450531 GCCTGATTGAATCTGGGCGG 61.451 60.000 25.94 11.53 45.45 6.13
2326 2359 1.450531 CCTGATTGAATCTGGGCGGC 61.451 60.000 19.79 0.00 42.68 6.53
2327 2360 1.779025 CTGATTGAATCTGGGCGGCG 61.779 60.000 0.51 0.51 0.00 6.46
2328 2361 1.523711 GATTGAATCTGGGCGGCGA 60.524 57.895 12.98 0.00 0.00 5.54
2329 2362 1.776034 GATTGAATCTGGGCGGCGAC 61.776 60.000 12.98 8.16 0.00 5.19
2330 2363 2.257409 ATTGAATCTGGGCGGCGACT 62.257 55.000 14.66 0.00 0.00 4.18
2331 2364 2.125106 GAATCTGGGCGGCGACTT 60.125 61.111 14.66 0.00 0.00 3.01
2332 2365 2.125106 AATCTGGGCGGCGACTTC 60.125 61.111 14.66 0.00 0.00 3.01
2333 2366 4.514577 ATCTGGGCGGCGACTTCG 62.515 66.667 14.66 0.70 43.27 3.79
2345 2378 2.392933 CGACTTCGCCTACTCTCATC 57.607 55.000 0.00 0.00 0.00 2.92
2346 2379 1.944024 CGACTTCGCCTACTCTCATCT 59.056 52.381 0.00 0.00 0.00 2.90
2347 2380 2.286713 CGACTTCGCCTACTCTCATCTG 60.287 54.545 0.00 0.00 0.00 2.90
2348 2381 2.028130 ACTTCGCCTACTCTCATCTGG 58.972 52.381 0.00 0.00 0.00 3.86
2349 2382 2.028130 CTTCGCCTACTCTCATCTGGT 58.972 52.381 0.00 0.00 0.00 4.00
2350 2383 2.145397 TCGCCTACTCTCATCTGGTT 57.855 50.000 0.00 0.00 0.00 3.67
2351 2384 1.751351 TCGCCTACTCTCATCTGGTTG 59.249 52.381 0.00 0.00 0.00 3.77
2352 2385 1.478510 CGCCTACTCTCATCTGGTTGT 59.521 52.381 0.00 0.00 0.00 3.32
2353 2386 2.480416 CGCCTACTCTCATCTGGTTGTC 60.480 54.545 0.00 0.00 0.00 3.18
2354 2387 2.763448 GCCTACTCTCATCTGGTTGTCT 59.237 50.000 0.00 0.00 0.00 3.41
2355 2388 3.181480 GCCTACTCTCATCTGGTTGTCTC 60.181 52.174 0.00 0.00 0.00 3.36
2356 2389 3.383185 CCTACTCTCATCTGGTTGTCTCC 59.617 52.174 0.00 0.00 0.00 3.71
2357 2390 3.182887 ACTCTCATCTGGTTGTCTCCT 57.817 47.619 0.00 0.00 0.00 3.69
2358 2391 2.830923 ACTCTCATCTGGTTGTCTCCTG 59.169 50.000 0.00 0.00 0.00 3.86
2359 2392 2.830923 CTCTCATCTGGTTGTCTCCTGT 59.169 50.000 0.00 0.00 0.00 4.00
2360 2393 2.564504 TCTCATCTGGTTGTCTCCTGTG 59.435 50.000 0.00 0.00 0.00 3.66
2361 2394 2.564504 CTCATCTGGTTGTCTCCTGTGA 59.435 50.000 0.00 0.00 0.00 3.58
2362 2395 2.300152 TCATCTGGTTGTCTCCTGTGAC 59.700 50.000 0.00 0.00 37.47 3.67
2363 2396 0.673985 TCTGGTTGTCTCCTGTGACG 59.326 55.000 0.00 0.00 39.64 4.35
2364 2397 0.319900 CTGGTTGTCTCCTGTGACGG 60.320 60.000 0.00 0.00 39.64 4.79
2365 2398 1.668151 GGTTGTCTCCTGTGACGGC 60.668 63.158 0.00 0.00 39.64 5.68
2366 2399 1.069090 GTTGTCTCCTGTGACGGCA 59.931 57.895 0.00 0.00 39.64 5.69
2367 2400 0.320771 GTTGTCTCCTGTGACGGCAT 60.321 55.000 0.00 0.00 39.64 4.40
2368 2401 0.037326 TTGTCTCCTGTGACGGCATC 60.037 55.000 0.00 0.00 39.64 3.91
2369 2402 1.153549 GTCTCCTGTGACGGCATCC 60.154 63.158 0.00 0.00 0.00 3.51
2370 2403 1.305297 TCTCCTGTGACGGCATCCT 60.305 57.895 0.00 0.00 0.00 3.24
2371 2404 1.142748 CTCCTGTGACGGCATCCTC 59.857 63.158 0.00 0.00 0.00 3.71
2372 2405 1.607801 CTCCTGTGACGGCATCCTCA 61.608 60.000 0.00 0.00 0.00 3.86
2373 2406 0.977627 TCCTGTGACGGCATCCTCAT 60.978 55.000 0.00 0.00 0.00 2.90
2374 2407 0.531532 CCTGTGACGGCATCCTCATC 60.532 60.000 0.00 0.00 0.00 2.92
2375 2408 0.463204 CTGTGACGGCATCCTCATCT 59.537 55.000 0.00 0.00 0.00 2.90
2376 2409 0.904649 TGTGACGGCATCCTCATCTT 59.095 50.000 0.00 0.00 0.00 2.40
2377 2410 1.134699 TGTGACGGCATCCTCATCTTC 60.135 52.381 0.00 0.00 0.00 2.87
2378 2411 1.137872 GTGACGGCATCCTCATCTTCT 59.862 52.381 0.00 0.00 0.00 2.85
2379 2412 1.137675 TGACGGCATCCTCATCTTCTG 59.862 52.381 0.00 0.00 0.00 3.02
2380 2413 0.179062 ACGGCATCCTCATCTTCTGC 60.179 55.000 0.00 0.00 0.00 4.26
2381 2414 0.179065 CGGCATCCTCATCTTCTGCA 60.179 55.000 0.00 0.00 34.56 4.41
2382 2415 1.542767 CGGCATCCTCATCTTCTGCAT 60.543 52.381 0.00 0.00 34.56 3.96
2383 2416 2.152830 GGCATCCTCATCTTCTGCATC 58.847 52.381 0.00 0.00 34.56 3.91
2384 2417 1.799403 GCATCCTCATCTTCTGCATCG 59.201 52.381 0.00 0.00 33.13 3.84
2385 2418 2.547430 GCATCCTCATCTTCTGCATCGA 60.547 50.000 0.00 0.00 33.13 3.59
2386 2419 2.879002 TCCTCATCTTCTGCATCGAC 57.121 50.000 0.00 0.00 0.00 4.20
2387 2420 1.066152 TCCTCATCTTCTGCATCGACG 59.934 52.381 0.00 0.00 0.00 5.12
2388 2421 1.066152 CCTCATCTTCTGCATCGACGA 59.934 52.381 0.00 0.00 0.00 4.20
2389 2422 2.115595 CTCATCTTCTGCATCGACGAC 58.884 52.381 0.00 0.00 0.00 4.34
2390 2423 1.472480 TCATCTTCTGCATCGACGACA 59.528 47.619 0.00 0.00 0.00 4.35
2391 2424 1.851053 CATCTTCTGCATCGACGACAG 59.149 52.381 0.00 4.25 0.00 3.51
2392 2425 0.456824 TCTTCTGCATCGACGACAGC 60.457 55.000 15.08 15.08 0.00 4.40
2393 2426 1.737196 CTTCTGCATCGACGACAGCG 61.737 60.000 16.37 12.14 44.79 5.18
2394 2427 2.195123 TTCTGCATCGACGACAGCGA 62.195 55.000 16.37 13.73 42.48 4.93
2395 2428 2.500442 CTGCATCGACGACAGCGAC 61.500 63.158 16.37 0.00 40.94 5.19
2396 2429 3.248171 GCATCGACGACAGCGACC 61.248 66.667 0.00 0.00 40.94 4.79
2397 2430 2.485582 CATCGACGACAGCGACCT 59.514 61.111 0.00 0.00 40.94 3.85
2398 2431 1.583967 CATCGACGACAGCGACCTC 60.584 63.158 0.00 0.00 40.94 3.85
2399 2432 1.745864 ATCGACGACAGCGACCTCT 60.746 57.895 0.00 0.00 40.94 3.69
2400 2433 1.306642 ATCGACGACAGCGACCTCTT 61.307 55.000 0.00 0.00 40.94 2.85
2401 2434 1.512310 CGACGACAGCGACCTCTTC 60.512 63.158 0.00 0.00 41.64 2.87
2402 2435 1.579932 GACGACAGCGACCTCTTCA 59.420 57.895 0.00 0.00 41.64 3.02
2403 2436 0.171455 GACGACAGCGACCTCTTCAT 59.829 55.000 0.00 0.00 41.64 2.57
2404 2437 0.171455 ACGACAGCGACCTCTTCATC 59.829 55.000 0.00 0.00 41.64 2.92
2405 2438 0.453793 CGACAGCGACCTCTTCATCT 59.546 55.000 0.00 0.00 40.82 2.90
2406 2439 1.796982 CGACAGCGACCTCTTCATCTG 60.797 57.143 0.00 0.00 40.82 2.90
2407 2440 0.108424 ACAGCGACCTCTTCATCTGC 60.108 55.000 0.00 0.00 31.03 4.26
2408 2441 0.108472 CAGCGACCTCTTCATCTGCA 60.108 55.000 0.00 0.00 0.00 4.41
2409 2442 0.610174 AGCGACCTCTTCATCTGCAA 59.390 50.000 0.00 0.00 0.00 4.08
2410 2443 1.209019 AGCGACCTCTTCATCTGCAAT 59.791 47.619 0.00 0.00 0.00 3.56
2411 2444 1.596727 GCGACCTCTTCATCTGCAATC 59.403 52.381 0.00 0.00 0.00 2.67
2412 2445 2.208431 CGACCTCTTCATCTGCAATCC 58.792 52.381 0.00 0.00 0.00 3.01
2413 2446 2.208431 GACCTCTTCATCTGCAATCCG 58.792 52.381 0.00 0.00 0.00 4.18
2414 2447 1.134280 ACCTCTTCATCTGCAATCCGG 60.134 52.381 0.00 0.00 0.00 5.14
2415 2448 0.942962 CTCTTCATCTGCAATCCGGC 59.057 55.000 0.00 0.00 0.00 6.13
2416 2449 0.252761 TCTTCATCTGCAATCCGGCA 59.747 50.000 0.00 0.00 42.53 5.69
2417 2450 1.097232 CTTCATCTGCAATCCGGCAA 58.903 50.000 0.00 0.00 44.40 4.52
2418 2451 0.810648 TTCATCTGCAATCCGGCAAC 59.189 50.000 0.00 0.00 44.40 4.17
2419 2452 0.035152 TCATCTGCAATCCGGCAACT 60.035 50.000 0.00 0.00 44.40 3.16
2420 2453 0.379669 CATCTGCAATCCGGCAACTC 59.620 55.000 0.00 0.00 44.40 3.01
2421 2454 1.091771 ATCTGCAATCCGGCAACTCG 61.092 55.000 0.00 0.00 44.40 4.18
2422 2455 2.031919 TGCAATCCGGCAACTCGT 59.968 55.556 0.00 0.00 41.65 4.18
2423 2456 1.970917 CTGCAATCCGGCAACTCGTC 61.971 60.000 0.00 0.00 44.40 4.20
2424 2457 2.032634 GCAATCCGGCAACTCGTCA 61.033 57.895 0.00 0.00 0.00 4.35
2425 2458 1.970917 GCAATCCGGCAACTCGTCAG 61.971 60.000 0.00 0.00 0.00 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
664 665 2.233654 GCGAGCATACTGGCGAGTG 61.234 63.158 12.14 0.00 37.91 3.51
705 706 0.911769 CATTCCTAGGAGCCACCACA 59.088 55.000 12.26 0.00 42.04 4.17
874 896 2.220593 GGTCGTCTACTCGTCTAATCCG 59.779 54.545 0.00 0.00 0.00 4.18
880 902 0.612229 TGAGGGTCGTCTACTCGTCT 59.388 55.000 0.00 0.00 31.85 4.18
881 903 1.331138 CATGAGGGTCGTCTACTCGTC 59.669 57.143 0.00 0.00 31.85 4.20
882 904 1.339824 ACATGAGGGTCGTCTACTCGT 60.340 52.381 0.00 0.00 31.85 4.18
883 905 1.064208 CACATGAGGGTCGTCTACTCG 59.936 57.143 0.00 0.00 31.85 4.18
886 908 0.818296 AGCACATGAGGGTCGTCTAC 59.182 55.000 0.00 0.00 0.00 2.59
1157 1179 0.105224 CTGCTCCCTGATCTCTGCAG 59.895 60.000 7.63 7.63 41.15 4.41
1161 1183 1.193323 CACACTGCTCCCTGATCTCT 58.807 55.000 0.00 0.00 0.00 3.10
1172 1194 5.405935 TGTGTCATACTTATCACACTGCT 57.594 39.130 5.20 0.00 39.94 4.24
1233 1255 1.293179 CACGAGCCACTCACCATCA 59.707 57.895 0.00 0.00 0.00 3.07
1244 1266 2.393764 CAAATTTGACCAACACGAGCC 58.606 47.619 13.08 0.00 0.00 4.70
1269 1291 1.745489 GCCAACCCGAAGTAGCCAG 60.745 63.158 0.00 0.00 0.00 4.85
1303 1325 2.198827 TTGCGATGGAAAGTGGTGAT 57.801 45.000 0.00 0.00 0.00 3.06
1306 1328 1.202879 TCCTTTGCGATGGAAAGTGGT 60.203 47.619 6.10 0.00 0.00 4.16
1463 1485 4.322349 GCTGGTAGCTTATACTGGATCCAG 60.322 50.000 35.55 35.55 42.93 3.86
1570 1598 2.993899 CACATTAGTCGCTTTCTTCGGT 59.006 45.455 0.00 0.00 0.00 4.69
1572 1600 2.411748 TGCACATTAGTCGCTTTCTTCG 59.588 45.455 0.00 0.00 0.00 3.79
1629 1658 6.624917 CGAACAGATAGCACATATTTCAAACG 59.375 38.462 0.00 0.00 0.00 3.60
1647 1676 3.942130 ACATCACACAGATCGAACAGA 57.058 42.857 0.00 0.00 33.72 3.41
1653 1682 5.853282 GGAAAAAGAAACATCACACAGATCG 59.147 40.000 0.00 0.00 33.72 3.69
1658 1687 4.952957 TCCAGGAAAAAGAAACATCACACA 59.047 37.500 0.00 0.00 0.00 3.72
1659 1688 5.067805 AGTCCAGGAAAAAGAAACATCACAC 59.932 40.000 0.00 0.00 0.00 3.82
1660 1689 5.067674 CAGTCCAGGAAAAAGAAACATCACA 59.932 40.000 0.00 0.00 0.00 3.58
1808 1841 8.034804 CAGAAAACAAATTAGGGGGATAAACTG 58.965 37.037 0.00 0.00 0.00 3.16
1809 1842 7.180229 CCAGAAAACAAATTAGGGGGATAAACT 59.820 37.037 0.00 0.00 0.00 2.66
1810 1843 7.038587 ACCAGAAAACAAATTAGGGGGATAAAC 60.039 37.037 0.00 0.00 0.00 2.01
1811 1844 7.020009 ACCAGAAAACAAATTAGGGGGATAAA 58.980 34.615 0.00 0.00 0.00 1.40
1818 1851 6.405278 AACTCACCAGAAAACAAATTAGGG 57.595 37.500 0.00 0.00 0.00 3.53
1888 1921 3.057019 TCACGGAATCTAATATGCACGC 58.943 45.455 0.00 0.00 0.00 5.34
1889 1922 5.462068 TCTTTCACGGAATCTAATATGCACG 59.538 40.000 0.00 0.00 0.00 5.34
1890 1923 6.073548 CCTCTTTCACGGAATCTAATATGCAC 60.074 42.308 0.00 0.00 0.00 4.57
1891 1924 5.991606 CCTCTTTCACGGAATCTAATATGCA 59.008 40.000 0.00 0.00 0.00 3.96
1892 1925 6.223852 TCCTCTTTCACGGAATCTAATATGC 58.776 40.000 0.00 0.00 0.00 3.14
1893 1926 8.144478 TCTTCCTCTTTCACGGAATCTAATATG 58.856 37.037 0.00 0.00 38.53 1.78
1894 1927 8.145122 GTCTTCCTCTTTCACGGAATCTAATAT 58.855 37.037 0.00 0.00 38.53 1.28
1895 1928 7.417570 GGTCTTCCTCTTTCACGGAATCTAATA 60.418 40.741 0.00 0.00 38.53 0.98
1896 1929 6.342111 GTCTTCCTCTTTCACGGAATCTAAT 58.658 40.000 0.00 0.00 38.53 1.73
1897 1930 5.337330 GGTCTTCCTCTTTCACGGAATCTAA 60.337 44.000 0.00 0.00 38.53 2.10
1898 1931 4.159879 GGTCTTCCTCTTTCACGGAATCTA 59.840 45.833 0.00 0.00 38.53 1.98
1899 1932 3.055747 GGTCTTCCTCTTTCACGGAATCT 60.056 47.826 0.00 0.00 38.53 2.40
1900 1933 3.055747 AGGTCTTCCTCTTTCACGGAATC 60.056 47.826 0.00 0.00 40.58 2.52
1901 1934 2.907042 AGGTCTTCCTCTTTCACGGAAT 59.093 45.455 0.00 0.00 40.58 3.01
1902 1935 2.326428 AGGTCTTCCTCTTTCACGGAA 58.674 47.619 0.00 0.00 40.58 4.30
1903 1936 2.011122 AGGTCTTCCTCTTTCACGGA 57.989 50.000 0.00 0.00 40.58 4.69
1904 1937 3.090037 TCTAGGTCTTCCTCTTTCACGG 58.910 50.000 0.00 0.00 43.94 4.94
1905 1938 3.119424 GGTCTAGGTCTTCCTCTTTCACG 60.119 52.174 0.00 0.00 43.94 4.35
1906 1939 3.119424 CGGTCTAGGTCTTCCTCTTTCAC 60.119 52.174 0.00 0.00 43.94 3.18
1907 1940 3.090037 CGGTCTAGGTCTTCCTCTTTCA 58.910 50.000 0.00 0.00 43.94 2.69
1908 1941 3.129113 GTCGGTCTAGGTCTTCCTCTTTC 59.871 52.174 0.00 0.00 43.94 2.62
1909 1942 3.090790 GTCGGTCTAGGTCTTCCTCTTT 58.909 50.000 0.00 0.00 43.94 2.52
1910 1943 2.621147 GGTCGGTCTAGGTCTTCCTCTT 60.621 54.545 0.00 0.00 43.94 2.85
1911 1944 1.064537 GGTCGGTCTAGGTCTTCCTCT 60.065 57.143 0.00 0.00 43.94 3.69
1912 1945 1.064537 AGGTCGGTCTAGGTCTTCCTC 60.065 57.143 0.00 0.00 43.94 3.71
1914 1947 1.391577 GAGGTCGGTCTAGGTCTTCC 58.608 60.000 0.00 0.00 0.00 3.46
1915 1948 1.391577 GGAGGTCGGTCTAGGTCTTC 58.608 60.000 0.00 0.00 0.00 2.87
1916 1949 0.394080 CGGAGGTCGGTCTAGGTCTT 60.394 60.000 0.00 0.00 34.75 3.01
1917 1950 1.224039 CGGAGGTCGGTCTAGGTCT 59.776 63.158 0.00 0.00 34.75 3.85
1918 1951 3.824810 CGGAGGTCGGTCTAGGTC 58.175 66.667 0.00 0.00 34.75 3.85
1935 1968 4.681978 AGGAGTTGTGACGGCGCC 62.682 66.667 19.07 19.07 0.00 6.53
1936 1969 3.414700 CAGGAGTTGTGACGGCGC 61.415 66.667 6.90 0.00 0.00 6.53
1937 1970 3.414700 GCAGGAGTTGTGACGGCG 61.415 66.667 4.80 4.80 0.00 6.46
1938 1971 2.029844 GAGCAGGAGTTGTGACGGC 61.030 63.158 0.00 0.00 0.00 5.68
1939 1972 0.668706 CAGAGCAGGAGTTGTGACGG 60.669 60.000 0.00 0.00 0.00 4.79
1940 1973 1.287730 GCAGAGCAGGAGTTGTGACG 61.288 60.000 0.00 0.00 0.00 4.35
1941 1974 0.034616 AGCAGAGCAGGAGTTGTGAC 59.965 55.000 0.00 0.00 0.00 3.67
1942 1975 0.319728 GAGCAGAGCAGGAGTTGTGA 59.680 55.000 0.00 0.00 0.00 3.58
1943 1976 0.034476 TGAGCAGAGCAGGAGTTGTG 59.966 55.000 0.00 0.00 0.00 3.33
1944 1977 0.982704 ATGAGCAGAGCAGGAGTTGT 59.017 50.000 0.00 0.00 0.00 3.32
1945 1978 1.370609 CATGAGCAGAGCAGGAGTTG 58.629 55.000 0.00 0.00 0.00 3.16
1946 1979 0.252479 CCATGAGCAGAGCAGGAGTT 59.748 55.000 0.00 0.00 0.00 3.01
1947 1980 1.624479 CCCATGAGCAGAGCAGGAGT 61.624 60.000 0.00 0.00 0.00 3.85
1948 1981 1.146485 CCCATGAGCAGAGCAGGAG 59.854 63.158 0.00 0.00 0.00 3.69
1949 1982 1.306397 TCCCATGAGCAGAGCAGGA 60.306 57.895 0.00 0.00 0.00 3.86
1950 1983 1.153208 GTCCCATGAGCAGAGCAGG 60.153 63.158 0.00 0.00 0.00 4.85
1951 1984 0.462225 CTGTCCCATGAGCAGAGCAG 60.462 60.000 0.00 0.00 32.39 4.24
1952 1985 0.906282 TCTGTCCCATGAGCAGAGCA 60.906 55.000 0.00 0.00 34.72 4.26
1953 1986 0.469070 ATCTGTCCCATGAGCAGAGC 59.531 55.000 15.33 0.00 41.73 4.09
1954 1987 1.269673 CGATCTGTCCCATGAGCAGAG 60.270 57.143 15.33 4.17 41.73 3.35
1955 1988 0.749049 CGATCTGTCCCATGAGCAGA 59.251 55.000 13.42 13.42 42.49 4.26
1956 1989 0.749049 TCGATCTGTCCCATGAGCAG 59.251 55.000 0.00 0.00 0.00 4.24
1957 1990 1.342496 GATCGATCTGTCCCATGAGCA 59.658 52.381 18.29 0.00 0.00 4.26
1958 1991 1.337635 GGATCGATCTGTCCCATGAGC 60.338 57.143 23.96 0.00 0.00 4.26
1959 1992 1.966354 TGGATCGATCTGTCCCATGAG 59.034 52.381 23.96 0.00 33.45 2.90
1960 1993 1.688735 GTGGATCGATCTGTCCCATGA 59.311 52.381 23.96 0.00 33.45 3.07
1961 1994 1.413812 TGTGGATCGATCTGTCCCATG 59.586 52.381 23.96 0.00 33.45 3.66
1962 1995 1.690893 CTGTGGATCGATCTGTCCCAT 59.309 52.381 23.96 0.00 33.45 4.00
1963 1996 1.114627 CTGTGGATCGATCTGTCCCA 58.885 55.000 23.96 11.77 33.45 4.37
1964 1997 0.249657 GCTGTGGATCGATCTGTCCC 60.250 60.000 23.96 9.15 33.45 4.46
1965 1998 0.749649 AGCTGTGGATCGATCTGTCC 59.250 55.000 23.96 10.54 35.02 4.02
1966 1999 1.680735 AGAGCTGTGGATCGATCTGTC 59.319 52.381 23.96 14.63 32.47 3.51
1967 2000 1.680735 GAGAGCTGTGGATCGATCTGT 59.319 52.381 23.96 2.40 32.47 3.41
1968 2001 1.680207 TGAGAGCTGTGGATCGATCTG 59.320 52.381 23.96 13.02 32.47 2.90
1969 2002 1.955778 CTGAGAGCTGTGGATCGATCT 59.044 52.381 23.96 3.75 32.47 2.75
1970 2003 1.602668 GCTGAGAGCTGTGGATCGATC 60.603 57.143 17.36 17.36 38.45 3.69
1971 2004 0.388659 GCTGAGAGCTGTGGATCGAT 59.611 55.000 0.00 0.00 38.45 3.59
1972 2005 1.670949 GGCTGAGAGCTGTGGATCGA 61.671 60.000 0.00 0.00 41.99 3.59
1973 2006 1.227205 GGCTGAGAGCTGTGGATCG 60.227 63.158 0.00 0.00 41.99 3.69
1974 2007 1.227205 CGGCTGAGAGCTGTGGATC 60.227 63.158 0.00 0.00 42.54 3.36
1975 2008 2.729479 CCGGCTGAGAGCTGTGGAT 61.729 63.158 0.00 0.00 45.98 3.41
1976 2009 3.385384 CCGGCTGAGAGCTGTGGA 61.385 66.667 0.00 0.00 45.98 4.02
1983 2016 3.842923 ATGGTCGCCGGCTGAGAG 61.843 66.667 26.68 8.63 0.00 3.20
1984 2017 4.147449 CATGGTCGCCGGCTGAGA 62.147 66.667 26.68 12.15 0.00 3.27
1998 2031 4.137872 CTTGCGGCCTTGGCCATG 62.138 66.667 27.80 9.47 0.00 3.66
2018 2051 4.821589 GGGAAGGCGTCGCTCCTG 62.822 72.222 20.96 0.00 36.28 3.86
2024 2057 4.796231 CACCGAGGGAAGGCGTCG 62.796 72.222 0.00 0.00 0.00 5.12
2025 2058 4.452733 CCACCGAGGGAAGGCGTC 62.453 72.222 0.00 0.00 0.00 5.19
2027 2060 4.452733 GACCACCGAGGGAAGGCG 62.453 72.222 0.00 0.00 43.89 5.52
2028 2061 3.003763 AGACCACCGAGGGAAGGC 61.004 66.667 0.00 0.00 43.89 4.35
2029 2062 2.359967 GGAGACCACCGAGGGAAGG 61.360 68.421 0.00 0.00 43.89 3.46
2030 2063 1.305381 AGGAGACCACCGAGGGAAG 60.305 63.158 0.00 0.00 43.89 3.46
2031 2064 1.609501 CAGGAGACCACCGAGGGAA 60.610 63.158 0.00 0.00 43.89 3.97
2032 2065 2.037367 CAGGAGACCACCGAGGGA 59.963 66.667 0.00 0.00 43.89 4.20
2033 2066 3.077556 CCAGGAGACCACCGAGGG 61.078 72.222 0.00 0.00 43.89 4.30
2034 2067 2.037367 TCCAGGAGACCACCGAGG 59.963 66.667 0.00 0.00 45.67 4.63
2035 2068 2.055042 CCTCCAGGAGACCACCGAG 61.055 68.421 19.21 0.00 37.39 4.63
2036 2069 2.037367 CCTCCAGGAGACCACCGA 59.963 66.667 19.21 0.00 37.39 4.69
2037 2070 2.037367 TCCTCCAGGAGACCACCG 59.963 66.667 19.21 0.00 39.78 4.94
2045 2078 1.496857 AGATGACGATCTCCTCCAGGA 59.503 52.381 0.00 0.00 43.08 3.86
2046 2079 1.612950 CAGATGACGATCTCCTCCAGG 59.387 57.143 0.00 0.00 36.75 4.45
2047 2080 1.612950 CCAGATGACGATCTCCTCCAG 59.387 57.143 0.00 0.00 36.75 3.86
2048 2081 1.697284 CCAGATGACGATCTCCTCCA 58.303 55.000 0.00 0.00 36.75 3.86
2049 2082 0.965439 CCCAGATGACGATCTCCTCC 59.035 60.000 0.00 0.00 36.75 4.30
2050 2083 1.885887 CTCCCAGATGACGATCTCCTC 59.114 57.143 0.00 0.00 36.75 3.71
2051 2084 1.496857 TCTCCCAGATGACGATCTCCT 59.503 52.381 0.00 0.00 36.75 3.69
2052 2085 1.988293 TCTCCCAGATGACGATCTCC 58.012 55.000 0.00 0.00 36.75 3.71
2053 2086 2.491693 GGATCTCCCAGATGACGATCTC 59.508 54.545 0.00 0.00 36.75 2.75
2054 2087 2.109834 AGGATCTCCCAGATGACGATCT 59.890 50.000 0.00 0.00 39.75 2.75
2055 2088 2.491693 GAGGATCTCCCAGATGACGATC 59.508 54.545 0.00 0.00 34.53 3.69
2056 2089 2.524306 GAGGATCTCCCAGATGACGAT 58.476 52.381 0.00 0.00 34.53 3.73
2057 2090 1.815795 CGAGGATCTCCCAGATGACGA 60.816 57.143 0.00 0.00 34.53 4.20
2058 2091 0.595588 CGAGGATCTCCCAGATGACG 59.404 60.000 0.00 0.00 34.53 4.35
2059 2092 1.611491 GACGAGGATCTCCCAGATGAC 59.389 57.143 0.00 0.00 34.53 3.06
2060 2093 1.479573 GGACGAGGATCTCCCAGATGA 60.480 57.143 0.00 0.00 34.53 2.92
2061 2094 0.965439 GGACGAGGATCTCCCAGATG 59.035 60.000 0.00 0.00 34.53 2.90
2062 2095 0.538516 CGGACGAGGATCTCCCAGAT 60.539 60.000 0.00 0.00 37.73 2.90
2063 2096 1.152943 CGGACGAGGATCTCCCAGA 60.153 63.158 0.00 0.00 37.41 3.86
2064 2097 2.851071 GCGGACGAGGATCTCCCAG 61.851 68.421 0.00 0.00 37.41 4.45
2065 2098 2.833582 GCGGACGAGGATCTCCCA 60.834 66.667 0.00 0.00 37.41 4.37
2066 2099 2.128507 AAGCGGACGAGGATCTCCC 61.129 63.158 0.00 0.00 36.42 4.30
2067 2100 1.066587 CAAGCGGACGAGGATCTCC 59.933 63.158 0.00 0.00 0.00 3.71
2068 2101 1.590259 GCAAGCGGACGAGGATCTC 60.590 63.158 0.00 0.00 0.00 2.75
2069 2102 2.496817 GCAAGCGGACGAGGATCT 59.503 61.111 0.00 0.00 0.00 2.75
2070 2103 2.586357 GGCAAGCGGACGAGGATC 60.586 66.667 0.00 0.00 0.00 3.36
2071 2104 4.162690 GGGCAAGCGGACGAGGAT 62.163 66.667 0.00 0.00 0.00 3.24
2078 2111 4.715523 CTTTCGGGGGCAAGCGGA 62.716 66.667 0.00 0.00 0.00 5.54
2082 2115 4.366684 AGGGCTTTCGGGGGCAAG 62.367 66.667 0.00 0.00 0.00 4.01
2083 2116 4.360405 GAGGGCTTTCGGGGGCAA 62.360 66.667 0.00 0.00 0.00 4.52
2086 2119 3.798511 GAGGAGGGCTTTCGGGGG 61.799 72.222 0.00 0.00 0.00 5.40
2087 2120 3.798511 GGAGGAGGGCTTTCGGGG 61.799 72.222 0.00 0.00 0.00 5.73
2088 2121 4.162690 CGGAGGAGGGCTTTCGGG 62.163 72.222 0.00 0.00 0.00 5.14
2089 2122 4.840005 GCGGAGGAGGGCTTTCGG 62.840 72.222 0.00 0.00 0.00 4.30
2090 2123 3.775654 AGCGGAGGAGGGCTTTCG 61.776 66.667 0.00 0.00 35.61 3.46
2091 2124 2.124942 CAGCGGAGGAGGGCTTTC 60.125 66.667 0.00 0.00 37.41 2.62
2092 2125 4.416738 GCAGCGGAGGAGGGCTTT 62.417 66.667 0.00 0.00 37.41 3.51
2123 2156 2.047274 TTACACTGCGCCAGGAGC 60.047 61.111 8.52 8.52 39.66 4.70
2124 2157 1.741770 GGTTACACTGCGCCAGGAG 60.742 63.158 4.18 0.00 41.98 3.69
2125 2158 2.167398 GAGGTTACACTGCGCCAGGA 62.167 60.000 4.18 0.00 35.51 3.86
2126 2159 1.741770 GAGGTTACACTGCGCCAGG 60.742 63.158 4.18 0.00 35.51 4.45
2127 2160 1.741770 GGAGGTTACACTGCGCCAG 60.742 63.158 4.18 4.99 37.52 4.85
2128 2161 2.345991 GGAGGTTACACTGCGCCA 59.654 61.111 4.18 0.00 0.00 5.69
2129 2162 2.033194 GTGGAGGTTACACTGCGCC 61.033 63.158 4.18 0.00 35.98 6.53
2130 2163 2.033194 GGTGGAGGTTACACTGCGC 61.033 63.158 0.00 0.00 38.83 6.09
2131 2164 1.375523 GGGTGGAGGTTACACTGCG 60.376 63.158 0.00 0.00 38.83 5.18
2132 2165 0.328258 ATGGGTGGAGGTTACACTGC 59.672 55.000 0.00 0.00 38.83 4.40
2133 2166 3.263425 AGTTATGGGTGGAGGTTACACTG 59.737 47.826 0.00 0.00 38.83 3.66
2134 2167 3.527937 AGTTATGGGTGGAGGTTACACT 58.472 45.455 0.00 0.00 38.83 3.55
2135 2168 3.994931 AGTTATGGGTGGAGGTTACAC 57.005 47.619 0.00 0.00 38.10 2.90
2136 2169 4.600111 AGAAAGTTATGGGTGGAGGTTACA 59.400 41.667 0.00 0.00 0.00 2.41
2137 2170 5.175388 AGAAAGTTATGGGTGGAGGTTAC 57.825 43.478 0.00 0.00 0.00 2.50
2138 2171 4.226620 GGAGAAAGTTATGGGTGGAGGTTA 59.773 45.833 0.00 0.00 0.00 2.85
2139 2172 3.010250 GGAGAAAGTTATGGGTGGAGGTT 59.990 47.826 0.00 0.00 0.00 3.50
2140 2173 2.576648 GGAGAAAGTTATGGGTGGAGGT 59.423 50.000 0.00 0.00 0.00 3.85
2141 2174 2.846827 AGGAGAAAGTTATGGGTGGAGG 59.153 50.000 0.00 0.00 0.00 4.30
2142 2175 3.430929 CGAGGAGAAAGTTATGGGTGGAG 60.431 52.174 0.00 0.00 0.00 3.86
2143 2176 2.500098 CGAGGAGAAAGTTATGGGTGGA 59.500 50.000 0.00 0.00 0.00 4.02
2144 2177 2.906354 CGAGGAGAAAGTTATGGGTGG 58.094 52.381 0.00 0.00 0.00 4.61
2145 2178 2.093447 AGCGAGGAGAAAGTTATGGGTG 60.093 50.000 0.00 0.00 0.00 4.61
2146 2179 2.168728 GAGCGAGGAGAAAGTTATGGGT 59.831 50.000 0.00 0.00 0.00 4.51
2147 2180 2.168521 TGAGCGAGGAGAAAGTTATGGG 59.831 50.000 0.00 0.00 0.00 4.00
2148 2181 3.190874 GTGAGCGAGGAGAAAGTTATGG 58.809 50.000 0.00 0.00 0.00 2.74
2149 2182 3.190874 GGTGAGCGAGGAGAAAGTTATG 58.809 50.000 0.00 0.00 0.00 1.90
2150 2183 2.832129 TGGTGAGCGAGGAGAAAGTTAT 59.168 45.455 0.00 0.00 0.00 1.89
2151 2184 2.029290 GTGGTGAGCGAGGAGAAAGTTA 60.029 50.000 0.00 0.00 0.00 2.24
2152 2185 1.048601 TGGTGAGCGAGGAGAAAGTT 58.951 50.000 0.00 0.00 0.00 2.66
2153 2186 0.318762 GTGGTGAGCGAGGAGAAAGT 59.681 55.000 0.00 0.00 0.00 2.66
2154 2187 0.734253 CGTGGTGAGCGAGGAGAAAG 60.734 60.000 0.00 0.00 0.00 2.62
2155 2188 1.289066 CGTGGTGAGCGAGGAGAAA 59.711 57.895 0.00 0.00 0.00 2.52
2156 2189 2.962569 CGTGGTGAGCGAGGAGAA 59.037 61.111 0.00 0.00 0.00 2.87
2157 2190 3.749064 GCGTGGTGAGCGAGGAGA 61.749 66.667 0.00 0.00 0.00 3.71
2158 2191 4.803426 GGCGTGGTGAGCGAGGAG 62.803 72.222 0.00 0.00 35.00 3.69
2161 2194 4.803426 GAGGGCGTGGTGAGCGAG 62.803 72.222 0.00 0.00 35.00 5.03
2164 2197 4.767255 CTGGAGGGCGTGGTGAGC 62.767 72.222 0.00 0.00 0.00 4.26
2165 2198 4.767255 GCTGGAGGGCGTGGTGAG 62.767 72.222 0.00 0.00 0.00 3.51
2182 2215 3.779083 TAGGAGGGGGAGGGCAGG 61.779 72.222 0.00 0.00 0.00 4.85
2183 2216 2.122636 CTAGGAGGGGGAGGGCAG 60.123 72.222 0.00 0.00 0.00 4.85
2184 2217 2.623763 TCTAGGAGGGGGAGGGCA 60.624 66.667 0.00 0.00 0.00 5.36
2185 2218 2.122769 GTCTAGGAGGGGGAGGGC 60.123 72.222 0.00 0.00 0.00 5.19
2186 2219 0.691413 GTTGTCTAGGAGGGGGAGGG 60.691 65.000 0.00 0.00 0.00 4.30
2187 2220 1.043673 CGTTGTCTAGGAGGGGGAGG 61.044 65.000 0.00 0.00 0.00 4.30
2188 2221 1.043673 CCGTTGTCTAGGAGGGGGAG 61.044 65.000 0.00 0.00 0.00 4.30
2189 2222 1.001248 CCGTTGTCTAGGAGGGGGA 59.999 63.158 0.00 0.00 0.00 4.81
2190 2223 2.732619 GCCGTTGTCTAGGAGGGGG 61.733 68.421 0.00 0.00 0.00 5.40
2191 2224 2.901042 GCCGTTGTCTAGGAGGGG 59.099 66.667 0.00 0.00 0.00 4.79
2192 2225 1.392710 ATCGCCGTTGTCTAGGAGGG 61.393 60.000 0.00 0.00 0.00 4.30
2193 2226 0.460311 AATCGCCGTTGTCTAGGAGG 59.540 55.000 0.00 0.00 0.00 4.30
2194 2227 3.644884 ATAATCGCCGTTGTCTAGGAG 57.355 47.619 0.00 0.00 0.00 3.69
2195 2228 6.093219 GTCTATATAATCGCCGTTGTCTAGGA 59.907 42.308 0.00 0.00 0.00 2.94
2196 2229 6.256686 GTCTATATAATCGCCGTTGTCTAGG 58.743 44.000 0.00 0.00 0.00 3.02
2197 2230 6.093771 AGGTCTATATAATCGCCGTTGTCTAG 59.906 42.308 0.00 0.00 0.00 2.43
2198 2231 5.942236 AGGTCTATATAATCGCCGTTGTCTA 59.058 40.000 0.00 0.00 0.00 2.59
2199 2232 4.765856 AGGTCTATATAATCGCCGTTGTCT 59.234 41.667 0.00 0.00 0.00 3.41
2200 2233 5.056894 AGGTCTATATAATCGCCGTTGTC 57.943 43.478 0.00 0.00 0.00 3.18
2201 2234 4.521639 TGAGGTCTATATAATCGCCGTTGT 59.478 41.667 0.00 0.00 0.00 3.32
2202 2235 5.055642 TGAGGTCTATATAATCGCCGTTG 57.944 43.478 0.00 0.00 0.00 4.10
2203 2236 5.916661 ATGAGGTCTATATAATCGCCGTT 57.083 39.130 0.00 0.00 0.00 4.44
2204 2237 5.916661 AATGAGGTCTATATAATCGCCGT 57.083 39.130 0.00 0.00 0.00 5.68
2205 2238 6.414109 CGTTAATGAGGTCTATATAATCGCCG 59.586 42.308 0.00 0.00 0.00 6.46
2206 2239 7.431668 GTCGTTAATGAGGTCTATATAATCGCC 59.568 40.741 0.00 0.00 0.00 5.54
2207 2240 8.182881 AGTCGTTAATGAGGTCTATATAATCGC 58.817 37.037 0.00 0.00 0.00 4.58
2208 2241 9.705471 GAGTCGTTAATGAGGTCTATATAATCG 57.295 37.037 0.00 0.00 0.00 3.34
2210 2243 9.529823 TGGAGTCGTTAATGAGGTCTATATAAT 57.470 33.333 0.00 0.00 0.00 1.28
2211 2244 8.929260 TGGAGTCGTTAATGAGGTCTATATAA 57.071 34.615 0.00 0.00 0.00 0.98
2213 2246 9.179909 CTATGGAGTCGTTAATGAGGTCTATAT 57.820 37.037 0.00 0.00 0.00 0.86
2214 2247 8.380867 TCTATGGAGTCGTTAATGAGGTCTATA 58.619 37.037 0.00 5.50 0.00 1.31
2215 2248 7.175293 GTCTATGGAGTCGTTAATGAGGTCTAT 59.825 40.741 0.00 4.67 0.00 1.98
2216 2249 6.485984 GTCTATGGAGTCGTTAATGAGGTCTA 59.514 42.308 0.00 0.00 0.00 2.59
2217 2250 5.299782 GTCTATGGAGTCGTTAATGAGGTCT 59.700 44.000 0.00 0.00 0.00 3.85
2218 2251 5.067413 TGTCTATGGAGTCGTTAATGAGGTC 59.933 44.000 0.00 0.00 0.00 3.85
2219 2252 4.954202 TGTCTATGGAGTCGTTAATGAGGT 59.046 41.667 0.00 0.00 0.00 3.85
2220 2253 5.515797 TGTCTATGGAGTCGTTAATGAGG 57.484 43.478 0.00 0.00 0.00 3.86
2221 2254 6.860539 CAGATGTCTATGGAGTCGTTAATGAG 59.139 42.308 0.00 0.00 0.00 2.90
2222 2255 6.735968 GCAGATGTCTATGGAGTCGTTAATGA 60.736 42.308 0.00 0.00 0.00 2.57
2223 2256 5.403766 GCAGATGTCTATGGAGTCGTTAATG 59.596 44.000 0.00 0.00 0.00 1.90
2224 2257 5.303078 AGCAGATGTCTATGGAGTCGTTAAT 59.697 40.000 0.00 0.00 0.00 1.40
2225 2258 4.645136 AGCAGATGTCTATGGAGTCGTTAA 59.355 41.667 0.00 0.00 0.00 2.01
2226 2259 4.036852 CAGCAGATGTCTATGGAGTCGTTA 59.963 45.833 0.00 0.00 0.00 3.18
2227 2260 3.027412 AGCAGATGTCTATGGAGTCGTT 58.973 45.455 0.00 0.00 0.00 3.85
2228 2261 2.360483 CAGCAGATGTCTATGGAGTCGT 59.640 50.000 0.00 0.00 0.00 4.34
2229 2262 2.861750 GCAGCAGATGTCTATGGAGTCG 60.862 54.545 0.00 0.00 0.00 4.18
2230 2263 2.364970 AGCAGCAGATGTCTATGGAGTC 59.635 50.000 0.00 0.00 0.00 3.36
2231 2264 2.396608 AGCAGCAGATGTCTATGGAGT 58.603 47.619 0.00 0.00 0.00 3.85
2232 2265 3.132160 CAAGCAGCAGATGTCTATGGAG 58.868 50.000 0.00 0.00 0.00 3.86
2233 2266 2.767960 TCAAGCAGCAGATGTCTATGGA 59.232 45.455 0.00 0.00 0.00 3.41
2234 2267 3.189618 TCAAGCAGCAGATGTCTATGG 57.810 47.619 0.00 0.00 0.00 2.74
2235 2268 3.937079 TGTTCAAGCAGCAGATGTCTATG 59.063 43.478 0.00 0.00 0.00 2.23
2236 2269 4.212143 TGTTCAAGCAGCAGATGTCTAT 57.788 40.909 0.00 0.00 0.00 1.98
2237 2270 3.683365 TGTTCAAGCAGCAGATGTCTA 57.317 42.857 0.00 0.00 0.00 2.59
2238 2271 2.556144 TGTTCAAGCAGCAGATGTCT 57.444 45.000 0.00 0.00 0.00 3.41
2239 2272 3.727079 CGATTGTTCAAGCAGCAGATGTC 60.727 47.826 0.00 0.00 0.00 3.06
2240 2273 2.161012 CGATTGTTCAAGCAGCAGATGT 59.839 45.455 0.00 0.00 0.00 3.06
2241 2274 2.477357 CCGATTGTTCAAGCAGCAGATG 60.477 50.000 0.00 0.00 0.00 2.90
2242 2275 1.741706 CCGATTGTTCAAGCAGCAGAT 59.258 47.619 0.00 0.00 0.00 2.90
2243 2276 1.159285 CCGATTGTTCAAGCAGCAGA 58.841 50.000 0.00 0.00 0.00 4.26
2244 2277 0.455633 GCCGATTGTTCAAGCAGCAG 60.456 55.000 4.48 0.00 0.00 4.24
2245 2278 1.580942 GCCGATTGTTCAAGCAGCA 59.419 52.632 4.48 0.00 0.00 4.41
2246 2279 1.153958 GGCCGATTGTTCAAGCAGC 60.154 57.895 1.11 1.11 0.00 5.25
2247 2280 0.169672 CTGGCCGATTGTTCAAGCAG 59.830 55.000 0.00 0.00 0.00 4.24
2248 2281 1.243342 CCTGGCCGATTGTTCAAGCA 61.243 55.000 0.00 0.00 0.00 3.91
2249 2282 1.244019 ACCTGGCCGATTGTTCAAGC 61.244 55.000 0.00 0.00 0.00 4.01
2250 2283 0.804989 GACCTGGCCGATTGTTCAAG 59.195 55.000 0.00 0.00 0.00 3.02
2251 2284 0.400213 AGACCTGGCCGATTGTTCAA 59.600 50.000 0.00 0.00 0.00 2.69
2252 2285 0.321564 CAGACCTGGCCGATTGTTCA 60.322 55.000 0.00 0.00 0.00 3.18
2253 2286 1.026718 CCAGACCTGGCCGATTGTTC 61.027 60.000 2.75 0.00 44.73 3.18
2254 2287 1.002134 CCAGACCTGGCCGATTGTT 60.002 57.895 2.75 0.00 44.73 2.83
2255 2288 2.671070 CCAGACCTGGCCGATTGT 59.329 61.111 2.75 0.00 44.73 2.71
2273 2306 4.394712 GTGACTGGTCAGGGGCGG 62.395 72.222 3.47 0.00 40.75 6.13
2274 2307 4.394712 GGTGACTGGTCAGGGGCG 62.395 72.222 3.47 0.00 40.75 6.13
2275 2308 3.249189 TGGTGACTGGTCAGGGGC 61.249 66.667 3.47 0.00 40.75 5.80
2276 2309 3.072476 CTGGTGACTGGTCAGGGG 58.928 66.667 3.47 0.00 40.75 4.79
2277 2310 2.219875 AGCTGGTGACTGGTCAGGG 61.220 63.158 3.47 0.00 40.75 4.45
2278 2311 3.476386 AGCTGGTGACTGGTCAGG 58.524 61.111 3.47 0.00 40.75 3.86
2282 2315 1.460305 ACTGGAGCTGGTGACTGGT 60.460 57.895 0.00 0.00 43.08 4.00
2283 2316 1.294780 GACTGGAGCTGGTGACTGG 59.705 63.158 0.00 0.00 0.00 4.00
2284 2317 1.294780 GGACTGGAGCTGGTGACTG 59.705 63.158 0.00 0.00 0.00 3.51
2285 2318 2.279069 CGGACTGGAGCTGGTGACT 61.279 63.158 0.00 0.00 0.00 3.41
2286 2319 2.262915 CGGACTGGAGCTGGTGAC 59.737 66.667 0.00 0.00 0.00 3.67
2287 2320 2.203640 ACGGACTGGAGCTGGTGA 60.204 61.111 0.00 0.00 0.00 4.02
2288 2321 2.262915 GACGGACTGGAGCTGGTG 59.737 66.667 0.00 0.00 0.00 4.17
2289 2322 3.374402 CGACGGACTGGAGCTGGT 61.374 66.667 0.00 0.00 0.00 4.00
2290 2323 4.803426 GCGACGGACTGGAGCTGG 62.803 72.222 0.00 0.00 0.00 4.85
2291 2324 4.803426 GGCGACGGACTGGAGCTG 62.803 72.222 0.00 0.00 0.00 4.24
2293 2326 4.803426 CAGGCGACGGACTGGAGC 62.803 72.222 0.00 0.00 46.15 4.70
2298 2331 0.537188 ATTCAATCAGGCGACGGACT 59.463 50.000 0.00 0.00 37.37 3.85
2299 2332 0.931005 GATTCAATCAGGCGACGGAC 59.069 55.000 0.00 0.00 37.37 4.79
2300 2333 0.824109 AGATTCAATCAGGCGACGGA 59.176 50.000 0.00 0.00 39.42 4.69
2301 2334 0.933097 CAGATTCAATCAGGCGACGG 59.067 55.000 0.00 0.00 0.00 4.79
2302 2335 0.933097 CCAGATTCAATCAGGCGACG 59.067 55.000 0.00 0.00 0.00 5.12
2303 2336 1.303309 CCCAGATTCAATCAGGCGAC 58.697 55.000 3.18 0.00 34.85 5.19
2304 2337 0.464373 GCCCAGATTCAATCAGGCGA 60.464 55.000 13.96 0.00 39.92 5.54
2305 2338 2.028130 GCCCAGATTCAATCAGGCG 58.972 57.895 13.96 4.78 39.92 5.52
2306 2339 1.450531 CCGCCCAGATTCAATCAGGC 61.451 60.000 17.66 17.66 43.56 4.85
2307 2340 1.450531 GCCGCCCAGATTCAATCAGG 61.451 60.000 1.67 1.67 35.86 3.86
2308 2341 1.779025 CGCCGCCCAGATTCAATCAG 61.779 60.000 0.00 0.00 0.00 2.90
2309 2342 1.819208 CGCCGCCCAGATTCAATCA 60.819 57.895 0.00 0.00 0.00 2.57
2310 2343 1.523711 TCGCCGCCCAGATTCAATC 60.524 57.895 0.00 0.00 0.00 2.67
2311 2344 1.819632 GTCGCCGCCCAGATTCAAT 60.820 57.895 0.00 0.00 0.00 2.57
2312 2345 2.435938 GTCGCCGCCCAGATTCAA 60.436 61.111 0.00 0.00 0.00 2.69
2313 2346 2.852495 GAAGTCGCCGCCCAGATTCA 62.852 60.000 0.00 0.00 0.00 2.57
2314 2347 2.125106 AAGTCGCCGCCCAGATTC 60.125 61.111 0.00 0.00 0.00 2.52
2315 2348 2.125106 GAAGTCGCCGCCCAGATT 60.125 61.111 0.00 0.00 0.00 2.40
2316 2349 4.514577 CGAAGTCGCCGCCCAGAT 62.515 66.667 0.00 0.00 0.00 2.90
2326 2359 1.944024 AGATGAGAGTAGGCGAAGTCG 59.056 52.381 0.00 0.00 36.95 4.18
2327 2360 2.034053 CCAGATGAGAGTAGGCGAAGTC 59.966 54.545 0.00 0.00 0.00 3.01
2328 2361 2.028130 CCAGATGAGAGTAGGCGAAGT 58.972 52.381 0.00 0.00 0.00 3.01
2329 2362 2.028130 ACCAGATGAGAGTAGGCGAAG 58.972 52.381 0.00 0.00 0.00 3.79
2330 2363 2.145397 ACCAGATGAGAGTAGGCGAA 57.855 50.000 0.00 0.00 0.00 4.70
2331 2364 1.751351 CAACCAGATGAGAGTAGGCGA 59.249 52.381 0.00 0.00 0.00 5.54
2332 2365 1.478510 ACAACCAGATGAGAGTAGGCG 59.521 52.381 0.00 0.00 0.00 5.52
2333 2366 2.763448 AGACAACCAGATGAGAGTAGGC 59.237 50.000 0.00 0.00 0.00 3.93
2334 2367 3.383185 GGAGACAACCAGATGAGAGTAGG 59.617 52.174 0.00 0.00 0.00 3.18
2335 2368 4.097741 CAGGAGACAACCAGATGAGAGTAG 59.902 50.000 0.00 0.00 0.00 2.57
2336 2369 4.019858 CAGGAGACAACCAGATGAGAGTA 58.980 47.826 0.00 0.00 0.00 2.59
2337 2370 2.830923 CAGGAGACAACCAGATGAGAGT 59.169 50.000 0.00 0.00 0.00 3.24
2338 2371 2.830923 ACAGGAGACAACCAGATGAGAG 59.169 50.000 0.00 0.00 0.00 3.20
2339 2372 2.564504 CACAGGAGACAACCAGATGAGA 59.435 50.000 0.00 0.00 0.00 3.27
2340 2373 2.564504 TCACAGGAGACAACCAGATGAG 59.435 50.000 0.00 0.00 0.00 2.90
2341 2374 2.300152 GTCACAGGAGACAACCAGATGA 59.700 50.000 0.00 0.00 38.40 2.92
2342 2375 2.693069 GTCACAGGAGACAACCAGATG 58.307 52.381 0.00 0.00 38.40 2.90
2343 2376 1.273606 CGTCACAGGAGACAACCAGAT 59.726 52.381 0.00 0.00 38.43 2.90
2344 2377 0.673985 CGTCACAGGAGACAACCAGA 59.326 55.000 0.00 0.00 38.43 3.86
2345 2378 0.319900 CCGTCACAGGAGACAACCAG 60.320 60.000 0.00 0.00 38.43 4.00
2346 2379 1.745890 CCGTCACAGGAGACAACCA 59.254 57.895 0.00 0.00 38.43 3.67
2347 2380 1.668151 GCCGTCACAGGAGACAACC 60.668 63.158 0.00 0.00 38.43 3.77
2348 2381 0.320771 ATGCCGTCACAGGAGACAAC 60.321 55.000 0.00 0.00 38.43 3.32
2349 2382 0.037326 GATGCCGTCACAGGAGACAA 60.037 55.000 0.00 0.00 38.43 3.18
2350 2383 1.591703 GATGCCGTCACAGGAGACA 59.408 57.895 0.00 0.00 38.43 3.41
2351 2384 1.153549 GGATGCCGTCACAGGAGAC 60.154 63.158 0.00 0.00 35.19 3.36
2352 2385 1.305297 AGGATGCCGTCACAGGAGA 60.305 57.895 0.00 0.00 0.00 3.71
2353 2386 1.142748 GAGGATGCCGTCACAGGAG 59.857 63.158 0.00 0.00 0.00 3.69
2354 2387 0.977627 ATGAGGATGCCGTCACAGGA 60.978 55.000 0.00 0.00 39.63 3.86
2355 2388 0.531532 GATGAGGATGCCGTCACAGG 60.532 60.000 0.00 0.00 39.63 4.00
2356 2389 0.463204 AGATGAGGATGCCGTCACAG 59.537 55.000 0.00 0.00 39.63 3.66
2357 2390 0.904649 AAGATGAGGATGCCGTCACA 59.095 50.000 0.00 0.00 39.63 3.58
2358 2391 1.137872 AGAAGATGAGGATGCCGTCAC 59.862 52.381 0.00 0.00 39.63 3.67
2359 2392 1.137675 CAGAAGATGAGGATGCCGTCA 59.862 52.381 0.00 0.00 40.86 4.35
2360 2393 1.863267 CAGAAGATGAGGATGCCGTC 58.137 55.000 0.00 0.00 0.00 4.79
2361 2394 0.179062 GCAGAAGATGAGGATGCCGT 60.179 55.000 0.00 0.00 0.00 5.68
2362 2395 0.179065 TGCAGAAGATGAGGATGCCG 60.179 55.000 0.00 0.00 36.04 5.69
2363 2396 2.152830 GATGCAGAAGATGAGGATGCC 58.847 52.381 0.00 0.00 36.04 4.40
2364 2397 1.799403 CGATGCAGAAGATGAGGATGC 59.201 52.381 0.00 0.00 37.40 3.91
2365 2398 3.058450 GTCGATGCAGAAGATGAGGATG 58.942 50.000 0.00 0.00 0.00 3.51
2366 2399 2.288091 CGTCGATGCAGAAGATGAGGAT 60.288 50.000 0.00 0.00 0.00 3.24
2367 2400 1.066152 CGTCGATGCAGAAGATGAGGA 59.934 52.381 0.00 0.00 0.00 3.71
2368 2401 1.066152 TCGTCGATGCAGAAGATGAGG 59.934 52.381 0.00 0.00 0.00 3.86
2369 2402 2.115595 GTCGTCGATGCAGAAGATGAG 58.884 52.381 0.00 0.00 31.85 2.90
2370 2403 1.472480 TGTCGTCGATGCAGAAGATGA 59.528 47.619 0.00 6.65 31.85 2.92
2371 2404 1.851053 CTGTCGTCGATGCAGAAGATG 59.149 52.381 18.47 0.00 31.85 2.90
2372 2405 1.800655 GCTGTCGTCGATGCAGAAGAT 60.801 52.381 24.15 0.00 31.85 2.40
2373 2406 0.456824 GCTGTCGTCGATGCAGAAGA 60.457 55.000 24.15 0.00 32.39 2.87
2374 2407 1.737196 CGCTGTCGTCGATGCAGAAG 61.737 60.000 24.15 16.14 32.39 2.85
2375 2408 1.801512 CGCTGTCGTCGATGCAGAA 60.802 57.895 24.15 0.00 32.39 3.02
2376 2409 2.202479 CGCTGTCGTCGATGCAGA 60.202 61.111 24.15 6.12 32.39 4.26
2377 2410 2.202479 TCGCTGTCGTCGATGCAG 60.202 61.111 18.78 18.78 36.96 4.41
2378 2411 2.504026 GTCGCTGTCGTCGATGCA 60.504 61.111 18.53 0.00 38.29 3.96
2379 2412 3.248171 GGTCGCTGTCGTCGATGC 61.248 66.667 0.00 5.68 38.29 3.91
2380 2413 1.583967 GAGGTCGCTGTCGTCGATG 60.584 63.158 0.00 0.00 38.29 3.84
2381 2414 1.306642 AAGAGGTCGCTGTCGTCGAT 61.307 55.000 0.00 0.00 38.29 3.59
2382 2415 1.909141 GAAGAGGTCGCTGTCGTCGA 61.909 60.000 0.00 0.00 36.96 4.20
2383 2416 1.512310 GAAGAGGTCGCTGTCGTCG 60.512 63.158 0.00 0.00 36.96 5.12
2384 2417 0.171455 ATGAAGAGGTCGCTGTCGTC 59.829 55.000 0.00 0.00 36.96 4.20
2385 2418 0.171455 GATGAAGAGGTCGCTGTCGT 59.829 55.000 0.00 0.00 36.96 4.34
2386 2419 0.453793 AGATGAAGAGGTCGCTGTCG 59.546 55.000 0.00 0.00 0.00 4.35
2387 2420 1.919918 CAGATGAAGAGGTCGCTGTC 58.080 55.000 0.00 0.00 30.57 3.51
2388 2421 0.108424 GCAGATGAAGAGGTCGCTGT 60.108 55.000 0.00 0.00 35.06 4.40
2389 2422 0.108472 TGCAGATGAAGAGGTCGCTG 60.108 55.000 0.00 0.00 35.47 5.18
2390 2423 0.610174 TTGCAGATGAAGAGGTCGCT 59.390 50.000 0.00 0.00 0.00 4.93
2391 2424 1.596727 GATTGCAGATGAAGAGGTCGC 59.403 52.381 0.00 0.00 0.00 5.19
2392 2425 2.208431 GGATTGCAGATGAAGAGGTCG 58.792 52.381 0.00 0.00 0.00 4.79
2393 2426 2.208431 CGGATTGCAGATGAAGAGGTC 58.792 52.381 0.00 0.00 0.00 3.85
2394 2427 1.134280 CCGGATTGCAGATGAAGAGGT 60.134 52.381 0.00 0.00 0.00 3.85
2395 2428 1.590932 CCGGATTGCAGATGAAGAGG 58.409 55.000 0.00 0.00 0.00 3.69
2396 2429 0.942962 GCCGGATTGCAGATGAAGAG 59.057 55.000 5.05 0.00 0.00 2.85
2397 2430 0.252761 TGCCGGATTGCAGATGAAGA 59.747 50.000 5.05 0.00 36.04 2.87
2398 2431 1.097232 TTGCCGGATTGCAGATGAAG 58.903 50.000 5.05 0.00 43.21 3.02
2399 2432 0.810648 GTTGCCGGATTGCAGATGAA 59.189 50.000 5.05 0.00 43.21 2.57
2400 2433 0.035152 AGTTGCCGGATTGCAGATGA 60.035 50.000 5.05 0.00 43.21 2.92
2401 2434 0.379669 GAGTTGCCGGATTGCAGATG 59.620 55.000 5.05 0.00 43.21 2.90
2402 2435 1.091771 CGAGTTGCCGGATTGCAGAT 61.092 55.000 5.05 0.00 43.21 2.90
2403 2436 1.741401 CGAGTTGCCGGATTGCAGA 60.741 57.895 5.05 0.00 43.21 4.26
2404 2437 1.970917 GACGAGTTGCCGGATTGCAG 61.971 60.000 5.05 0.00 43.21 4.41
2405 2438 2.031919 ACGAGTTGCCGGATTGCA 59.968 55.556 5.05 0.00 40.07 4.08
2406 2439 1.970917 CTGACGAGTTGCCGGATTGC 61.971 60.000 5.05 0.00 0.00 3.56
2407 2440 2.081526 CTGACGAGTTGCCGGATTG 58.918 57.895 5.05 0.00 0.00 2.67
2408 2441 4.598257 CTGACGAGTTGCCGGATT 57.402 55.556 5.05 0.00 0.00 3.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.