Multiple sequence alignment - TraesCS3B01G505400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G505400 chr3B 100.000 4469 0 0 1 4469 749526951 749522483 0.000000e+00 8253.0
1 TraesCS3B01G505400 chr3B 99.010 606 6 0 1 606 222323649 222324254 0.000000e+00 1086.0
2 TraesCS3B01G505400 chr3B 78.676 816 96 46 1908 2651 761600108 761600917 5.230000e-129 472.0
3 TraesCS3B01G505400 chr3B 79.834 362 54 12 3055 3407 794347143 794347494 3.450000e-61 246.0
4 TraesCS3B01G505400 chr3B 79.189 370 53 11 3057 3407 794352268 794352632 7.470000e-58 235.0
5 TraesCS3B01G505400 chr3B 99.057 106 1 0 3784 3889 660994580 660994475 1.640000e-44 191.0
6 TraesCS3B01G505400 chr3D 94.120 2619 102 19 878 3480 562333684 562331102 0.000000e+00 3936.0
7 TraesCS3B01G505400 chr3D 95.208 313 13 2 3478 3788 562331023 562330711 1.120000e-135 494.0
8 TraesCS3B01G505400 chr3D 86.351 359 26 7 4072 4413 562330694 562330342 1.960000e-98 370.0
9 TraesCS3B01G505400 chr3D 78.195 133 14 5 2448 2578 513665708 513665589 2.230000e-08 71.3
10 TraesCS3B01G505400 chr3A 93.767 2551 108 11 946 3480 697561520 697559005 0.000000e+00 3783.0
11 TraesCS3B01G505400 chr3A 95.513 312 13 1 3478 3788 697558926 697558615 8.630000e-137 497.0
12 TraesCS3B01G505400 chr3A 87.050 278 15 5 4095 4356 697558588 697558316 1.220000e-75 294.0
13 TraesCS3B01G505400 chr3A 95.000 80 4 0 882 961 697561619 697561540 4.690000e-25 126.0
14 TraesCS3B01G505400 chr3A 95.238 63 3 0 4351 4413 697558104 697558042 2.840000e-17 100.0
15 TraesCS3B01G505400 chr3A 92.424 66 4 1 2426 2491 710614598 710614534 4.760000e-15 93.5
16 TraesCS3B01G505400 chr6B 99.012 607 6 0 1 607 45785180 45785786 0.000000e+00 1088.0
17 TraesCS3B01G505400 chr6B 93.548 124 6 2 3784 3905 145837732 145837609 2.750000e-42 183.0
18 TraesCS3B01G505400 chr2B 98.852 610 7 0 1 610 54543550 54544159 0.000000e+00 1088.0
19 TraesCS3B01G505400 chr2B 99.010 606 6 0 1 606 800915913 800915308 0.000000e+00 1086.0
20 TraesCS3B01G505400 chr6A 98.849 608 4 1 1 608 2964823 2965427 0.000000e+00 1081.0
21 TraesCS3B01G505400 chr6A 93.617 47 3 0 4419 4465 610283628 610283582 2.230000e-08 71.3
22 TraesCS3B01G505400 chr7A 98.680 606 8 0 1 606 705600726 705601331 0.000000e+00 1075.0
23 TraesCS3B01G505400 chr5A 98.680 606 8 0 1 606 435253074 435253679 0.000000e+00 1075.0
24 TraesCS3B01G505400 chr5A 97.143 630 14 2 1 626 387259826 387260455 0.000000e+00 1061.0
25 TraesCS3B01G505400 chr5A 99.048 105 1 0 3783 3887 480125001 480124897 5.900000e-44 189.0
26 TraesCS3B01G505400 chr5A 99.048 105 1 0 3784 3888 531614580 531614684 5.900000e-44 189.0
27 TraesCS3B01G505400 chr5A 96.429 112 3 1 3784 3894 567297365 567297254 2.750000e-42 183.0
28 TraesCS3B01G505400 chr5B 97.302 630 12 3 1 626 473811740 473811112 0.000000e+00 1064.0
29 TraesCS3B01G505400 chr5B 94.318 176 7 3 3911 4085 427931366 427931193 2.650000e-67 267.0
30 TraesCS3B01G505400 chr7B 94.828 174 7 2 3903 4075 92046030 92045858 2.050000e-68 270.0
31 TraesCS3B01G505400 chr7B 98.165 109 2 0 3780 3888 658751203 658751311 1.640000e-44 191.0
32 TraesCS3B01G505400 chr4B 94.857 175 6 3 3903 4075 80990822 80990649 2.050000e-68 270.0
33 TraesCS3B01G505400 chr7D 93.370 181 10 2 3901 4080 384149013 384148834 2.650000e-67 267.0
34 TraesCS3B01G505400 chr7D 93.370 181 8 4 3911 4090 39001449 39001272 9.530000e-67 265.0
35 TraesCS3B01G505400 chr7D 92.432 185 11 3 3900 4082 202716856 202716673 1.230000e-65 261.0
36 TraesCS3B01G505400 chr2A 92.973 185 8 5 3908 4090 761249202 761249021 9.530000e-67 265.0
37 TraesCS3B01G505400 chr1A 91.710 193 13 3 3906 4097 113537978 113538168 9.530000e-67 265.0
38 TraesCS3B01G505400 chr1A 99.057 106 1 0 3784 3889 585628430 585628325 1.640000e-44 191.0
39 TraesCS3B01G505400 chr1A 82.022 89 7 6 1011 1090 95617261 95617349 2.880000e-07 67.6
40 TraesCS3B01G505400 chr2D 92.857 182 9 4 3907 4085 455269180 455269000 1.230000e-65 261.0
41 TraesCS3B01G505400 chr4A 99.048 105 1 0 3784 3888 691126907 691127011 5.900000e-44 189.0
42 TraesCS3B01G505400 chr1B 96.522 115 1 3 3773 3887 583853418 583853529 2.120000e-43 187.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G505400 chr3B 749522483 749526951 4468 True 8253 8253 100.0000 1 4469 1 chr3B.!!$R2 4468
1 TraesCS3B01G505400 chr3B 222323649 222324254 605 False 1086 1086 99.0100 1 606 1 chr3B.!!$F1 605
2 TraesCS3B01G505400 chr3B 761600108 761600917 809 False 472 472 78.6760 1908 2651 1 chr3B.!!$F2 743
3 TraesCS3B01G505400 chr3D 562330342 562333684 3342 True 1600 3936 91.8930 878 4413 3 chr3D.!!$R2 3535
4 TraesCS3B01G505400 chr3A 697558042 697561619 3577 True 960 3783 93.3136 882 4413 5 chr3A.!!$R2 3531
5 TraesCS3B01G505400 chr6B 45785180 45785786 606 False 1088 1088 99.0120 1 607 1 chr6B.!!$F1 606
6 TraesCS3B01G505400 chr2B 54543550 54544159 609 False 1088 1088 98.8520 1 610 1 chr2B.!!$F1 609
7 TraesCS3B01G505400 chr2B 800915308 800915913 605 True 1086 1086 99.0100 1 606 1 chr2B.!!$R1 605
8 TraesCS3B01G505400 chr6A 2964823 2965427 604 False 1081 1081 98.8490 1 608 1 chr6A.!!$F1 607
9 TraesCS3B01G505400 chr7A 705600726 705601331 605 False 1075 1075 98.6800 1 606 1 chr7A.!!$F1 605
10 TraesCS3B01G505400 chr5A 435253074 435253679 605 False 1075 1075 98.6800 1 606 1 chr5A.!!$F2 605
11 TraesCS3B01G505400 chr5A 387259826 387260455 629 False 1061 1061 97.1430 1 626 1 chr5A.!!$F1 625
12 TraesCS3B01G505400 chr5B 473811112 473811740 628 True 1064 1064 97.3020 1 626 1 chr5B.!!$R2 625

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
782 790 0.108089 GGGAAGGAAGAGGCGAGAAC 60.108 60.0 0.0 0.0 0.00 3.01 F
1330 1373 0.322906 GGCTTGCTTGTTCCTAGCCT 60.323 55.0 0.0 0.0 44.37 4.58 F
1924 1993 0.317479 ACTTTGCTCCTCGTAACGCT 59.683 50.0 0.0 0.0 0.00 5.07 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1899 1968 0.038159 ACGAGGAGCAAAGTCGGAAG 60.038 55.000 0.0 0.0 38.03 3.46 R
2434 2566 1.008327 TGGAGGTATGCAAGGGAGAGA 59.992 52.381 0.0 0.0 0.00 3.10 R
3880 4107 0.179078 AACCAACAACTACGGACGCA 60.179 50.000 0.0 0.0 0.00 5.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
235 242 1.716581 CGTCAGCTCTCGTTTTCAGAC 59.283 52.381 0.00 0.00 0.00 3.51
376 383 1.607756 AGACAGGGAAGCTCAGCGA 60.608 57.895 0.00 0.00 0.00 4.93
532 539 2.612972 CGACACACTTGGCTAGGACAAT 60.613 50.000 0.20 0.00 26.61 2.71
640 648 2.166907 TTTTTGTGGGTCCCATGTGT 57.833 45.000 15.49 0.00 35.28 3.72
641 649 2.166907 TTTTGTGGGTCCCATGTGTT 57.833 45.000 15.49 0.00 35.28 3.32
642 650 3.314307 TTTTGTGGGTCCCATGTGTTA 57.686 42.857 15.49 0.00 35.28 2.41
643 651 2.577606 TTGTGGGTCCCATGTGTTAG 57.422 50.000 15.49 0.00 35.28 2.34
644 652 1.440618 TGTGGGTCCCATGTGTTAGT 58.559 50.000 15.49 0.00 35.28 2.24
645 653 1.777878 TGTGGGTCCCATGTGTTAGTT 59.222 47.619 15.49 0.00 35.28 2.24
646 654 2.175931 TGTGGGTCCCATGTGTTAGTTT 59.824 45.455 15.49 0.00 35.28 2.66
647 655 2.817844 GTGGGTCCCATGTGTTAGTTTC 59.182 50.000 15.49 0.00 35.28 2.78
648 656 2.714250 TGGGTCCCATGTGTTAGTTTCT 59.286 45.455 6.47 0.00 0.00 2.52
649 657 3.139397 TGGGTCCCATGTGTTAGTTTCTT 59.861 43.478 6.47 0.00 0.00 2.52
650 658 3.506067 GGGTCCCATGTGTTAGTTTCTTG 59.494 47.826 1.78 0.00 0.00 3.02
651 659 4.142038 GGTCCCATGTGTTAGTTTCTTGT 58.858 43.478 0.00 0.00 0.00 3.16
652 660 4.583073 GGTCCCATGTGTTAGTTTCTTGTT 59.417 41.667 0.00 0.00 0.00 2.83
653 661 5.068591 GGTCCCATGTGTTAGTTTCTTGTTT 59.931 40.000 0.00 0.00 0.00 2.83
654 662 5.977129 GTCCCATGTGTTAGTTTCTTGTTTG 59.023 40.000 0.00 0.00 0.00 2.93
655 663 5.888724 TCCCATGTGTTAGTTTCTTGTTTGA 59.111 36.000 0.00 0.00 0.00 2.69
656 664 5.977129 CCCATGTGTTAGTTTCTTGTTTGAC 59.023 40.000 0.00 0.00 0.00 3.18
657 665 6.405286 CCCATGTGTTAGTTTCTTGTTTGACA 60.405 38.462 0.00 0.00 0.00 3.58
658 666 7.032580 CCATGTGTTAGTTTCTTGTTTGACAA 58.967 34.615 0.00 0.00 36.54 3.18
659 667 7.706179 CCATGTGTTAGTTTCTTGTTTGACAAT 59.294 33.333 0.00 0.00 37.48 2.71
660 668 8.533965 CATGTGTTAGTTTCTTGTTTGACAATG 58.466 33.333 0.00 0.00 37.48 2.82
661 669 7.598278 TGTGTTAGTTTCTTGTTTGACAATGT 58.402 30.769 0.00 0.00 37.48 2.71
662 670 8.731605 TGTGTTAGTTTCTTGTTTGACAATGTA 58.268 29.630 0.00 0.00 37.48 2.29
663 671 9.562583 GTGTTAGTTTCTTGTTTGACAATGTAA 57.437 29.630 0.00 0.00 37.48 2.41
668 676 7.702348 AGTTTCTTGTTTGACAATGTAAAGAGC 59.298 33.333 0.00 0.00 37.48 4.09
669 677 6.691754 TCTTGTTTGACAATGTAAAGAGCA 57.308 33.333 0.00 0.00 37.48 4.26
670 678 7.275888 TCTTGTTTGACAATGTAAAGAGCAT 57.724 32.000 0.00 0.00 37.48 3.79
671 679 7.715657 TCTTGTTTGACAATGTAAAGAGCATT 58.284 30.769 0.00 0.00 37.48 3.56
672 680 8.196771 TCTTGTTTGACAATGTAAAGAGCATTT 58.803 29.630 0.00 0.00 37.48 2.32
673 681 7.928908 TGTTTGACAATGTAAAGAGCATTTC 57.071 32.000 0.00 0.00 34.68 2.17
674 682 7.715657 TGTTTGACAATGTAAAGAGCATTTCT 58.284 30.769 0.00 0.00 34.68 2.52
676 684 9.677567 GTTTGACAATGTAAAGAGCATTTCTTA 57.322 29.630 0.00 0.00 45.41 2.10
679 687 9.453572 TGACAATGTAAAGAGCATTTCTTATCT 57.546 29.630 0.00 0.00 45.41 1.98
682 690 9.017669 CAATGTAAAGAGCATTTCTTATCTTGC 57.982 33.333 0.00 0.00 45.41 4.01
683 691 6.775088 TGTAAAGAGCATTTCTTATCTTGCG 58.225 36.000 0.00 0.00 45.41 4.85
684 692 6.593770 TGTAAAGAGCATTTCTTATCTTGCGA 59.406 34.615 0.00 0.00 45.41 5.10
685 693 6.690194 AAAGAGCATTTCTTATCTTGCGAT 57.310 33.333 0.00 0.00 45.41 4.58
686 694 7.792374 AAAGAGCATTTCTTATCTTGCGATA 57.208 32.000 0.00 0.00 45.41 2.92
687 695 7.792374 AAGAGCATTTCTTATCTTGCGATAA 57.208 32.000 0.00 0.00 44.32 1.75
688 696 7.976135 AGAGCATTTCTTATCTTGCGATAAT 57.024 32.000 0.00 0.00 40.36 1.28
689 697 9.494271 AAGAGCATTTCTTATCTTGCGATAATA 57.506 29.630 0.00 0.00 44.32 0.98
690 698 9.664332 AGAGCATTTCTTATCTTGCGATAATAT 57.336 29.630 0.00 0.00 40.36 1.28
702 710 9.909644 ATCTTGCGATAATATAGTCGTTTTAGT 57.090 29.630 10.27 0.00 39.87 2.24
706 714 9.603298 TGCGATAATATAGTCGTTTTAGTACTG 57.397 33.333 5.39 0.00 39.87 2.74
707 715 9.817365 GCGATAATATAGTCGTTTTAGTACTGA 57.183 33.333 5.39 0.00 39.87 3.41
720 728 9.353353 CGTTTTAGTACTGAATAATGTATTGCG 57.647 33.333 5.39 0.00 0.00 4.85
721 729 9.646336 GTTTTAGTACTGAATAATGTATTGCGG 57.354 33.333 5.39 0.00 0.00 5.69
722 730 5.924475 AGTACTGAATAATGTATTGCGGC 57.076 39.130 0.00 0.00 0.00 6.53
723 731 5.364778 AGTACTGAATAATGTATTGCGGCA 58.635 37.500 0.00 0.00 0.00 5.69
724 732 5.820423 AGTACTGAATAATGTATTGCGGCAA 59.180 36.000 18.85 18.85 0.00 4.52
725 733 4.920376 ACTGAATAATGTATTGCGGCAAC 58.080 39.130 18.94 7.77 0.00 4.17
726 734 4.640201 ACTGAATAATGTATTGCGGCAACT 59.360 37.500 18.94 9.89 0.00 3.16
727 735 5.125417 ACTGAATAATGTATTGCGGCAACTT 59.875 36.000 18.94 11.43 0.00 2.66
728 736 5.960113 TGAATAATGTATTGCGGCAACTTT 58.040 33.333 18.94 13.33 0.00 2.66
729 737 5.804473 TGAATAATGTATTGCGGCAACTTTG 59.196 36.000 18.94 0.00 0.00 2.77
730 738 3.932545 AATGTATTGCGGCAACTTTGA 57.067 38.095 18.94 0.92 0.00 2.69
731 739 4.454728 AATGTATTGCGGCAACTTTGAT 57.545 36.364 18.94 3.35 0.00 2.57
732 740 3.932545 TGTATTGCGGCAACTTTGATT 57.067 38.095 18.94 2.56 0.00 2.57
733 741 3.832276 TGTATTGCGGCAACTTTGATTC 58.168 40.909 18.94 0.00 0.00 2.52
734 742 3.254411 TGTATTGCGGCAACTTTGATTCA 59.746 39.130 18.94 2.29 0.00 2.57
735 743 3.598019 ATTGCGGCAACTTTGATTCAT 57.402 38.095 18.94 0.00 0.00 2.57
736 744 2.634982 TGCGGCAACTTTGATTCATC 57.365 45.000 0.00 0.00 0.00 2.92
737 745 2.161855 TGCGGCAACTTTGATTCATCT 58.838 42.857 0.00 0.00 0.00 2.90
738 746 2.095110 TGCGGCAACTTTGATTCATCTG 60.095 45.455 0.00 0.00 0.00 2.90
739 747 2.523015 CGGCAACTTTGATTCATCTGC 58.477 47.619 0.00 0.00 0.00 4.26
740 748 2.095110 CGGCAACTTTGATTCATCTGCA 60.095 45.455 10.19 0.00 0.00 4.41
741 749 3.428452 CGGCAACTTTGATTCATCTGCAT 60.428 43.478 10.19 0.00 0.00 3.96
742 750 4.501071 GGCAACTTTGATTCATCTGCATT 58.499 39.130 10.19 0.00 0.00 3.56
743 751 4.933400 GGCAACTTTGATTCATCTGCATTT 59.067 37.500 10.19 0.00 0.00 2.32
744 752 5.163893 GGCAACTTTGATTCATCTGCATTTG 60.164 40.000 10.19 0.00 0.00 2.32
745 753 5.670341 GCAACTTTGATTCATCTGCATTTGC 60.670 40.000 0.00 0.00 42.50 3.68
776 784 2.009681 TTTTTGGGGAAGGAAGAGGC 57.990 50.000 0.00 0.00 0.00 4.70
777 785 0.251165 TTTTGGGGAAGGAAGAGGCG 60.251 55.000 0.00 0.00 0.00 5.52
778 786 1.131303 TTTGGGGAAGGAAGAGGCGA 61.131 55.000 0.00 0.00 0.00 5.54
779 787 1.553690 TTGGGGAAGGAAGAGGCGAG 61.554 60.000 0.00 0.00 0.00 5.03
780 788 1.686110 GGGGAAGGAAGAGGCGAGA 60.686 63.158 0.00 0.00 0.00 4.04
781 789 1.265454 GGGGAAGGAAGAGGCGAGAA 61.265 60.000 0.00 0.00 0.00 2.87
782 790 0.108089 GGGAAGGAAGAGGCGAGAAC 60.108 60.000 0.00 0.00 0.00 3.01
783 791 0.608640 GGAAGGAAGAGGCGAGAACA 59.391 55.000 0.00 0.00 0.00 3.18
784 792 1.002087 GGAAGGAAGAGGCGAGAACAA 59.998 52.381 0.00 0.00 0.00 2.83
785 793 2.355209 GGAAGGAAGAGGCGAGAACAAT 60.355 50.000 0.00 0.00 0.00 2.71
786 794 2.393271 AGGAAGAGGCGAGAACAATG 57.607 50.000 0.00 0.00 0.00 2.82
787 795 1.625818 AGGAAGAGGCGAGAACAATGT 59.374 47.619 0.00 0.00 0.00 2.71
788 796 2.832129 AGGAAGAGGCGAGAACAATGTA 59.168 45.455 0.00 0.00 0.00 2.29
789 797 2.930682 GGAAGAGGCGAGAACAATGTAC 59.069 50.000 0.00 0.00 0.00 2.90
790 798 3.585862 GAAGAGGCGAGAACAATGTACA 58.414 45.455 0.00 0.00 0.00 2.90
791 799 3.678056 AGAGGCGAGAACAATGTACAA 57.322 42.857 0.00 0.00 0.00 2.41
792 800 3.589988 AGAGGCGAGAACAATGTACAAG 58.410 45.455 0.00 0.00 0.00 3.16
793 801 2.673368 GAGGCGAGAACAATGTACAAGG 59.327 50.000 0.00 0.00 0.00 3.61
794 802 1.737793 GGCGAGAACAATGTACAAGGG 59.262 52.381 0.00 0.00 0.00 3.95
795 803 2.614481 GGCGAGAACAATGTACAAGGGA 60.614 50.000 0.00 0.00 0.00 4.20
796 804 2.415512 GCGAGAACAATGTACAAGGGAC 59.584 50.000 0.00 0.00 0.00 4.46
797 805 3.659786 CGAGAACAATGTACAAGGGACA 58.340 45.455 0.00 0.00 0.00 4.02
798 806 4.062293 CGAGAACAATGTACAAGGGACAA 58.938 43.478 0.00 0.00 0.00 3.18
799 807 4.695455 CGAGAACAATGTACAAGGGACAAT 59.305 41.667 0.00 0.00 0.00 2.71
800 808 5.163854 CGAGAACAATGTACAAGGGACAATC 60.164 44.000 0.00 0.00 0.00 2.67
801 809 5.880901 AGAACAATGTACAAGGGACAATCT 58.119 37.500 0.00 0.00 0.00 2.40
802 810 6.306987 AGAACAATGTACAAGGGACAATCTT 58.693 36.000 0.00 0.00 0.00 2.40
803 811 6.777580 AGAACAATGTACAAGGGACAATCTTT 59.222 34.615 0.00 0.00 0.00 2.52
804 812 6.976934 ACAATGTACAAGGGACAATCTTTT 57.023 33.333 0.00 0.00 0.00 2.27
805 813 6.981722 ACAATGTACAAGGGACAATCTTTTC 58.018 36.000 0.00 0.00 0.00 2.29
806 814 6.549364 ACAATGTACAAGGGACAATCTTTTCA 59.451 34.615 0.00 0.00 0.00 2.69
807 815 7.233348 ACAATGTACAAGGGACAATCTTTTCAT 59.767 33.333 0.00 0.00 0.00 2.57
808 816 7.781324 ATGTACAAGGGACAATCTTTTCATT 57.219 32.000 0.00 0.00 0.00 2.57
809 817 7.595819 TGTACAAGGGACAATCTTTTCATTT 57.404 32.000 0.00 0.00 0.00 2.32
810 818 8.017418 TGTACAAGGGACAATCTTTTCATTTT 57.983 30.769 0.00 0.00 0.00 1.82
811 819 8.482128 TGTACAAGGGACAATCTTTTCATTTTT 58.518 29.630 0.00 0.00 0.00 1.94
834 842 9.801873 TTTTTGAGAAGTATGTTTTCTTTCCAG 57.198 29.630 0.00 0.00 35.14 3.86
835 843 6.560253 TGAGAAGTATGTTTTCTTTCCAGC 57.440 37.500 0.00 0.00 35.14 4.85
836 844 6.061441 TGAGAAGTATGTTTTCTTTCCAGCA 58.939 36.000 0.00 0.00 35.14 4.41
837 845 6.716628 TGAGAAGTATGTTTTCTTTCCAGCAT 59.283 34.615 0.00 0.00 35.14 3.79
838 846 7.231317 TGAGAAGTATGTTTTCTTTCCAGCATT 59.769 33.333 0.00 0.00 35.14 3.56
839 847 7.955918 AGAAGTATGTTTTCTTTCCAGCATTT 58.044 30.769 0.00 0.00 30.98 2.32
840 848 8.424133 AGAAGTATGTTTTCTTTCCAGCATTTT 58.576 29.630 0.00 0.00 30.98 1.82
841 849 8.962884 AAGTATGTTTTCTTTCCAGCATTTTT 57.037 26.923 0.00 0.00 0.00 1.94
863 871 6.585695 TTTGAGAAGTGTGTACTACTAGGG 57.414 41.667 0.00 0.00 35.69 3.53
864 872 5.509832 TGAGAAGTGTGTACTACTAGGGA 57.490 43.478 0.00 0.00 35.69 4.20
865 873 5.251764 TGAGAAGTGTGTACTACTAGGGAC 58.748 45.833 0.00 0.00 35.69 4.46
866 874 5.221986 TGAGAAGTGTGTACTACTAGGGACA 60.222 44.000 0.00 0.00 35.69 4.02
867 875 5.638133 AGAAGTGTGTACTACTAGGGACAA 58.362 41.667 0.00 0.00 35.69 3.18
868 876 6.254522 AGAAGTGTGTACTACTAGGGACAAT 58.745 40.000 0.00 0.00 35.69 2.71
869 877 6.377712 AGAAGTGTGTACTACTAGGGACAATC 59.622 42.308 0.00 0.00 35.69 2.67
870 878 5.577100 AGTGTGTACTACTAGGGACAATCA 58.423 41.667 0.00 0.00 34.74 2.57
871 879 6.195700 AGTGTGTACTACTAGGGACAATCAT 58.804 40.000 0.00 0.00 34.74 2.45
872 880 7.351952 AGTGTGTACTACTAGGGACAATCATA 58.648 38.462 0.00 0.00 34.74 2.15
873 881 7.837689 AGTGTGTACTACTAGGGACAATCATAA 59.162 37.037 0.00 0.00 34.74 1.90
874 882 8.136165 GTGTGTACTACTAGGGACAATCATAAG 58.864 40.741 0.00 0.00 0.00 1.73
875 883 7.146648 GTGTACTACTAGGGACAATCATAAGC 58.853 42.308 0.00 0.00 0.00 3.09
876 884 5.810080 ACTACTAGGGACAATCATAAGCC 57.190 43.478 0.00 0.00 0.00 4.35
877 885 4.593634 ACTACTAGGGACAATCATAAGCCC 59.406 45.833 0.00 0.00 39.12 5.19
880 888 1.986882 GGGACAATCATAAGCCCTGG 58.013 55.000 0.00 0.00 35.86 4.45
881 889 1.215423 GGGACAATCATAAGCCCTGGT 59.785 52.381 0.00 0.00 35.86 4.00
882 890 2.358195 GGGACAATCATAAGCCCTGGTT 60.358 50.000 0.00 0.00 35.86 3.67
883 891 3.365472 GGACAATCATAAGCCCTGGTTT 58.635 45.455 0.00 0.00 0.00 3.27
884 892 3.381590 GGACAATCATAAGCCCTGGTTTC 59.618 47.826 0.00 0.00 0.00 2.78
926 934 1.813513 CCCAAGCCCATATCGATGTC 58.186 55.000 8.54 0.00 0.00 3.06
963 971 1.908793 AGTCCAGTCCAGTCCACCG 60.909 63.158 0.00 0.00 0.00 4.94
1099 1142 4.194720 CGAACCTCTCCTCCGCCG 62.195 72.222 0.00 0.00 0.00 6.46
1263 1306 3.200825 TCTCCCTTCCCTTGCTTATTCAG 59.799 47.826 0.00 0.00 0.00 3.02
1318 1361 1.377725 CGGGAATCACTGGCTTGCT 60.378 57.895 0.00 0.00 0.00 3.91
1328 1371 0.807496 CTGGCTTGCTTGTTCCTAGC 59.193 55.000 0.00 0.00 39.10 3.42
1329 1372 0.609131 TGGCTTGCTTGTTCCTAGCC 60.609 55.000 0.00 0.00 46.75 3.93
1330 1373 0.322906 GGCTTGCTTGTTCCTAGCCT 60.323 55.000 0.00 0.00 44.37 4.58
1331 1374 1.539157 GCTTGCTTGTTCCTAGCCTT 58.461 50.000 0.00 0.00 37.85 4.35
1332 1375 1.200948 GCTTGCTTGTTCCTAGCCTTG 59.799 52.381 0.00 0.00 37.85 3.61
1333 1376 1.200948 CTTGCTTGTTCCTAGCCTTGC 59.799 52.381 0.00 0.00 37.85 4.01
1334 1377 0.609131 TGCTTGTTCCTAGCCTTGCC 60.609 55.000 0.00 0.00 37.85 4.52
1335 1378 0.322906 GCTTGTTCCTAGCCTTGCCT 60.323 55.000 0.00 0.00 32.45 4.75
1336 1379 1.065418 GCTTGTTCCTAGCCTTGCCTA 60.065 52.381 0.00 0.00 32.45 3.93
1337 1380 2.911484 CTTGTTCCTAGCCTTGCCTAG 58.089 52.381 0.00 0.00 35.62 3.02
1338 1381 0.541863 TGTTCCTAGCCTTGCCTAGC 59.458 55.000 0.00 0.00 34.74 3.42
1339 1382 0.530870 GTTCCTAGCCTTGCCTAGCG 60.531 60.000 0.00 0.00 34.74 4.26
1340 1383 2.280457 CCTAGCCTTGCCTAGCGC 60.280 66.667 0.00 0.00 34.74 5.92
1341 1384 2.280457 CTAGCCTTGCCTAGCGCC 60.280 66.667 2.29 0.00 36.24 6.53
1396 1453 1.151497 GATCCCCCATCCCATCCCT 60.151 63.158 0.00 0.00 0.00 4.20
1399 1456 2.780040 CCCCATCCCATCCCTGCT 60.780 66.667 0.00 0.00 0.00 4.24
1425 1482 1.804326 GCCGCTGCTGCTGAATTTG 60.804 57.895 14.03 0.00 36.97 2.32
1565 1622 1.017387 GCAACTAGGCATGCTGTACC 58.983 55.000 18.92 0.00 39.46 3.34
1734 1801 2.997485 ATTGCGCCTTCTGTTTCTTC 57.003 45.000 4.18 0.00 0.00 2.87
1758 1826 8.137745 TCATATTGGAAAGAAGAAAAGGCATT 57.862 30.769 0.00 0.00 0.00 3.56
1796 1864 5.468746 ACGACGAAAGAAATTGAGAATGGAA 59.531 36.000 0.00 0.00 0.00 3.53
1797 1865 6.149474 ACGACGAAAGAAATTGAGAATGGAAT 59.851 34.615 0.00 0.00 0.00 3.01
1798 1866 7.023575 CGACGAAAGAAATTGAGAATGGAATT 58.976 34.615 0.00 0.00 40.93 2.17
1799 1867 7.538678 CGACGAAAGAAATTGAGAATGGAATTT 59.461 33.333 0.00 0.00 36.07 1.82
1841 1910 1.136474 CGCGACGCAATTGAGTAAACA 60.136 47.619 21.35 0.00 0.00 2.83
1848 1917 4.154195 ACGCAATTGAGTAAACAGTCATCC 59.846 41.667 13.54 0.00 0.00 3.51
1861 1930 5.160607 ACAGTCATCCGGTCAAAGAATAA 57.839 39.130 0.00 0.00 0.00 1.40
1899 1968 7.547370 ACTTGCTAGTCAAATTCACTATGTCTC 59.453 37.037 0.00 0.00 33.65 3.36
1904 1973 6.102663 AGTCAAATTCACTATGTCTCTTCCG 58.897 40.000 0.00 0.00 0.00 4.30
1906 1975 6.035112 GTCAAATTCACTATGTCTCTTCCGAC 59.965 42.308 0.00 0.00 34.52 4.79
1916 1985 1.546476 TCTCTTCCGACTTTGCTCCTC 59.454 52.381 0.00 0.00 0.00 3.71
1923 1992 0.714439 GACTTTGCTCCTCGTAACGC 59.286 55.000 0.00 0.00 0.00 4.84
1924 1993 0.317479 ACTTTGCTCCTCGTAACGCT 59.683 50.000 0.00 0.00 0.00 5.07
2138 2217 8.497745 AGATTCAAAGGATCAGGTATGTTGTAT 58.502 33.333 0.00 0.00 0.00 2.29
2178 2261 5.044919 ACCATGATTTCCATAGACTGTTCCA 60.045 40.000 0.00 0.00 33.31 3.53
2188 2271 5.482908 CATAGACTGTTCCAGCACTTACTT 58.517 41.667 0.00 0.00 34.37 2.24
2191 2274 4.040952 AGACTGTTCCAGCACTTACTTGAT 59.959 41.667 0.00 0.00 34.37 2.57
2253 2344 6.670027 TGGGTGGGCATTATTACACTTAAAAT 59.330 34.615 0.00 0.00 34.42 1.82
2294 2388 2.906389 AGTCAGCTCCACCTCATGTTTA 59.094 45.455 0.00 0.00 0.00 2.01
2476 2608 4.691216 CAGTAAACCTAAGGTGAAGACTGC 59.309 45.833 0.00 0.00 35.34 4.40
2543 2679 6.942163 AGGAAGGTATATGCACATATGTCT 57.058 37.500 5.07 7.34 35.71 3.41
2620 2765 2.521465 CCTGTTTGCCACCCAGCA 60.521 61.111 0.00 0.00 42.17 4.41
2736 2881 1.432514 GCGCACAGAGTCTTTGATCA 58.567 50.000 10.53 0.00 0.00 2.92
2737 2882 2.005451 GCGCACAGAGTCTTTGATCAT 58.995 47.619 10.53 0.00 0.00 2.45
2754 2899 2.492025 TCATCCCCTTGTATGCCTCTT 58.508 47.619 0.00 0.00 0.00 2.85
2949 3094 3.383761 GTTCATGAAACTGCCTTTGGTG 58.616 45.455 10.35 0.00 34.85 4.17
3008 3153 2.063266 GCTGTGGTGTTTGCATGAATG 58.937 47.619 0.00 0.00 0.00 2.67
3052 3197 1.986575 GCGCACAGAGCCTTTGATCC 61.987 60.000 0.30 0.00 41.38 3.36
3076 3221 3.117512 CCCCTTGTATGCCTCCAGTAAAT 60.118 47.826 0.00 0.00 0.00 1.40
3079 3224 5.192927 CCTTGTATGCCTCCAGTAAATCAA 58.807 41.667 0.00 0.00 0.00 2.57
3218 3363 0.523072 CTCCATTTGTGGAACTGCCG 59.477 55.000 0.00 0.00 40.66 5.69
3297 3442 6.902224 ATGTGTGCATGAATGAATGAATTG 57.098 33.333 0.00 0.00 33.37 2.32
3365 3510 1.450312 GTTGCGATGAGTCCCTGGG 60.450 63.158 6.33 6.33 0.00 4.45
3393 3538 2.481969 CGAGGATTTCATCAAGGAGCGA 60.482 50.000 0.00 0.00 0.00 4.93
3420 3565 1.148157 ACTTTGCGGAGATCGATGCG 61.148 55.000 0.54 0.00 42.43 4.73
3423 3568 1.145759 TTGCGGAGATCGATGCGTTC 61.146 55.000 0.54 0.00 42.43 3.95
3510 3736 3.161866 CCTGGGTAGAGAGAGATTAGCC 58.838 54.545 0.00 0.00 35.92 3.93
3706 3933 3.064408 TGCGTACTAGGTATCGTCTTGTG 59.936 47.826 0.00 0.00 0.00 3.33
3711 3938 2.656560 AGGTATCGTCTTGTGAGCAC 57.343 50.000 0.00 0.00 0.00 4.40
3727 3954 5.046663 TGTGAGCACTTAGGTATTGTGATGA 60.047 40.000 1.99 0.00 33.95 2.92
3784 4011 4.095483 GTGGAAAGAGTATGATTGCTGTGG 59.905 45.833 0.00 0.00 0.00 4.17
3785 4012 4.019411 TGGAAAGAGTATGATTGCTGTGGA 60.019 41.667 0.00 0.00 0.00 4.02
3786 4013 4.574013 GGAAAGAGTATGATTGCTGTGGAG 59.426 45.833 0.00 0.00 0.00 3.86
3787 4014 3.191078 AGAGTATGATTGCTGTGGAGC 57.809 47.619 0.00 0.00 46.44 4.70
3788 4015 2.158842 AGAGTATGATTGCTGTGGAGCC 60.159 50.000 0.00 0.00 45.57 4.70
3789 4016 0.940126 GTATGATTGCTGTGGAGCCG 59.060 55.000 0.00 0.00 45.57 5.52
3790 4017 0.179048 TATGATTGCTGTGGAGCCGG 60.179 55.000 0.00 0.00 45.57 6.13
3791 4018 1.913951 ATGATTGCTGTGGAGCCGGA 61.914 55.000 5.05 0.00 45.57 5.14
3792 4019 1.153086 GATTGCTGTGGAGCCGGAT 60.153 57.895 5.05 0.00 45.57 4.18
3793 4020 1.153086 ATTGCTGTGGAGCCGGATC 60.153 57.895 12.38 12.38 45.57 3.36
3794 4021 2.615227 ATTGCTGTGGAGCCGGATCC 62.615 60.000 32.10 32.10 45.57 3.36
3795 4022 4.554036 GCTGTGGAGCCGGATCCC 62.554 72.222 34.85 25.27 39.57 3.85
3796 4023 3.866582 CTGTGGAGCCGGATCCCC 61.867 72.222 34.85 25.58 38.72 4.81
3797 4024 4.414956 TGTGGAGCCGGATCCCCT 62.415 66.667 34.85 7.35 38.72 4.79
3798 4025 3.866582 GTGGAGCCGGATCCCCTG 61.867 72.222 34.85 0.00 38.72 4.45
3799 4026 4.088351 TGGAGCCGGATCCCCTGA 62.088 66.667 34.85 14.76 38.72 3.86
3800 4027 3.551407 GGAGCCGGATCCCCTGAC 61.551 72.222 28.96 0.78 32.79 3.51
3801 4028 3.917760 GAGCCGGATCCCCTGACG 61.918 72.222 9.02 0.00 0.00 4.35
3802 4029 4.779733 AGCCGGATCCCCTGACGT 62.780 66.667 5.05 0.00 0.00 4.34
3803 4030 2.836360 GCCGGATCCCCTGACGTA 60.836 66.667 5.05 0.00 0.00 3.57
3804 4031 3.126528 CCGGATCCCCTGACGTAC 58.873 66.667 6.06 0.00 0.00 3.67
3805 4032 2.719979 CGGATCCCCTGACGTACG 59.280 66.667 15.01 15.01 0.00 3.67
3806 4033 2.842256 CGGATCCCCTGACGTACGG 61.842 68.421 21.06 1.19 0.00 4.02
3807 4034 2.416260 GATCCCCTGACGTACGGC 59.584 66.667 21.06 18.72 0.00 5.68
3808 4035 3.148031 GATCCCCTGACGTACGGCC 62.148 68.421 20.48 10.81 0.00 6.13
3809 4036 3.968837 ATCCCCTGACGTACGGCCA 62.969 63.158 20.48 14.99 0.00 5.36
3810 4037 4.446413 CCCCTGACGTACGGCCAC 62.446 72.222 20.48 7.80 0.00 5.01
3811 4038 4.446413 CCCTGACGTACGGCCACC 62.446 72.222 20.48 2.90 0.00 4.61
3812 4039 3.379445 CCTGACGTACGGCCACCT 61.379 66.667 20.48 0.00 0.00 4.00
3813 4040 2.126071 CTGACGTACGGCCACCTG 60.126 66.667 20.48 0.00 0.00 4.00
3814 4041 2.598099 TGACGTACGGCCACCTGA 60.598 61.111 20.48 0.00 0.00 3.86
3815 4042 2.126189 GACGTACGGCCACCTGAC 60.126 66.667 21.06 0.00 0.00 3.51
3816 4043 3.958822 GACGTACGGCCACCTGACG 62.959 68.421 21.06 6.95 36.05 4.35
3817 4044 4.047059 CGTACGGCCACCTGACGT 62.047 66.667 7.57 0.00 43.88 4.34
3818 4045 2.341176 GTACGGCCACCTGACGTT 59.659 61.111 2.24 0.00 41.53 3.99
3819 4046 2.025418 GTACGGCCACCTGACGTTG 61.025 63.158 2.24 0.00 41.53 4.10
3820 4047 3.229156 TACGGCCACCTGACGTTGG 62.229 63.158 2.24 6.95 41.53 3.77
3824 4051 4.263572 CCACCTGACGTTGGGCCA 62.264 66.667 0.00 0.00 0.00 5.36
3825 4052 2.978010 CACCTGACGTTGGGCCAC 60.978 66.667 5.23 0.00 0.00 5.01
3826 4053 3.168528 ACCTGACGTTGGGCCACT 61.169 61.111 5.23 0.00 0.00 4.00
3827 4054 2.669569 CCTGACGTTGGGCCACTG 60.670 66.667 5.23 3.70 0.00 3.66
3828 4055 2.425592 CTGACGTTGGGCCACTGA 59.574 61.111 5.23 0.00 0.00 3.41
3829 4056 1.961277 CTGACGTTGGGCCACTGAC 60.961 63.158 5.23 0.00 0.00 3.51
3830 4057 3.041940 GACGTTGGGCCACTGACG 61.042 66.667 23.66 23.66 41.00 4.35
3852 4079 4.368543 GGTCCGGGTCCACACGTC 62.369 72.222 0.00 0.00 42.08 4.34
3853 4080 3.608662 GTCCGGGTCCACACGTCA 61.609 66.667 0.00 0.00 42.08 4.35
3854 4081 3.299977 TCCGGGTCCACACGTCAG 61.300 66.667 0.00 0.00 42.08 3.51
3857 4084 3.986006 GGGTCCACACGTCAGCGA 61.986 66.667 0.00 0.00 42.00 4.93
3858 4085 2.430921 GGTCCACACGTCAGCGAG 60.431 66.667 0.00 0.00 42.00 5.03
3859 4086 2.335369 GTCCACACGTCAGCGAGT 59.665 61.111 0.00 0.00 42.28 4.18
3872 4099 4.746951 CGAGTGCGCCGTACGTCA 62.747 66.667 15.21 6.28 46.11 4.35
3873 4100 2.874780 GAGTGCGCCGTACGTCAG 60.875 66.667 15.21 6.03 46.11 3.51
3874 4101 3.318539 GAGTGCGCCGTACGTCAGA 62.319 63.158 15.21 0.00 46.11 3.27
3875 4102 2.874780 GTGCGCCGTACGTCAGAG 60.875 66.667 15.21 1.85 46.11 3.35
3876 4103 4.111016 TGCGCCGTACGTCAGAGG 62.111 66.667 15.21 0.00 46.11 3.69
3877 4104 3.807538 GCGCCGTACGTCAGAGGA 61.808 66.667 15.21 0.00 46.11 3.71
3878 4105 2.872557 CGCCGTACGTCAGAGGAA 59.127 61.111 15.21 0.00 36.87 3.36
3879 4106 1.513586 CGCCGTACGTCAGAGGAAC 60.514 63.158 15.21 0.00 36.87 3.62
3880 4107 1.919956 CGCCGTACGTCAGAGGAACT 61.920 60.000 15.21 0.00 38.37 3.01
3881 4108 0.456312 GCCGTACGTCAGAGGAACTG 60.456 60.000 15.21 0.00 46.97 3.16
3882 4109 0.456312 CCGTACGTCAGAGGAACTGC 60.456 60.000 15.21 0.00 45.38 4.40
3883 4110 0.793478 CGTACGTCAGAGGAACTGCG 60.793 60.000 7.22 0.00 45.38 5.18
3884 4111 3.444737 ACGTCAGAGGAACTGCGT 58.555 55.556 0.00 0.00 45.99 5.24
3885 4112 0.520404 TACGTCAGAGGAACTGCGTC 59.480 55.000 16.88 0.00 46.97 5.19
3886 4113 1.444553 CGTCAGAGGAACTGCGTCC 60.445 63.158 0.00 0.00 45.38 4.79
3891 4118 0.608582 AGAGGAACTGCGTCCGTAGT 60.609 55.000 4.56 4.56 41.55 2.73
3912 4139 5.666462 AGTTGTTGGTTGGTTTGGAAATAC 58.334 37.500 0.00 0.00 0.00 1.89
3913 4140 5.423931 AGTTGTTGGTTGGTTTGGAAATACT 59.576 36.000 0.00 0.00 0.00 2.12
3915 4142 4.342665 TGTTGGTTGGTTTGGAAATACTCC 59.657 41.667 0.00 0.00 45.64 3.85
3916 4143 3.502356 TGGTTGGTTTGGAAATACTCCC 58.498 45.455 0.00 0.00 44.69 4.30
3917 4144 3.141272 TGGTTGGTTTGGAAATACTCCCT 59.859 43.478 0.00 0.00 44.69 4.20
3918 4145 3.762288 GGTTGGTTTGGAAATACTCCCTC 59.238 47.826 0.00 0.00 44.69 4.30
3919 4146 3.732048 TGGTTTGGAAATACTCCCTCC 57.268 47.619 0.00 0.00 44.69 4.30
3920 4147 2.026636 TGGTTTGGAAATACTCCCTCCG 60.027 50.000 0.00 0.00 44.69 4.63
3921 4148 2.026542 GGTTTGGAAATACTCCCTCCGT 60.027 50.000 0.00 0.00 44.69 4.69
3922 4149 3.560668 GGTTTGGAAATACTCCCTCCGTT 60.561 47.826 0.00 0.00 44.69 4.44
3923 4150 3.622166 TTGGAAATACTCCCTCCGTTC 57.378 47.619 0.00 0.00 44.69 3.95
3924 4151 1.835531 TGGAAATACTCCCTCCGTTCC 59.164 52.381 0.00 0.00 44.69 3.62
3925 4152 1.140452 GGAAATACTCCCTCCGTTCCC 59.860 57.143 0.00 0.00 38.44 3.97
3926 4153 1.835531 GAAATACTCCCTCCGTTCCCA 59.164 52.381 0.00 0.00 0.00 4.37
3927 4154 1.961133 AATACTCCCTCCGTTCCCAA 58.039 50.000 0.00 0.00 0.00 4.12
3928 4155 1.961133 ATACTCCCTCCGTTCCCAAA 58.039 50.000 0.00 0.00 0.00 3.28
3929 4156 1.961133 TACTCCCTCCGTTCCCAAAT 58.039 50.000 0.00 0.00 0.00 2.32
3930 4157 1.961133 ACTCCCTCCGTTCCCAAATA 58.039 50.000 0.00 0.00 0.00 1.40
3931 4158 2.488836 ACTCCCTCCGTTCCCAAATAT 58.511 47.619 0.00 0.00 0.00 1.28
3932 4159 2.850568 ACTCCCTCCGTTCCCAAATATT 59.149 45.455 0.00 0.00 0.00 1.28
3933 4160 3.268595 ACTCCCTCCGTTCCCAAATATTT 59.731 43.478 0.00 0.00 0.00 1.40
3934 4161 3.626930 TCCCTCCGTTCCCAAATATTTG 58.373 45.455 19.40 19.40 37.90 2.32
3935 4162 3.010808 TCCCTCCGTTCCCAAATATTTGT 59.989 43.478 23.24 0.00 36.45 2.83
3936 4163 3.380320 CCCTCCGTTCCCAAATATTTGTC 59.620 47.826 23.24 11.68 36.45 3.18
3937 4164 4.270008 CCTCCGTTCCCAAATATTTGTCT 58.730 43.478 23.24 0.00 36.45 3.41
3938 4165 4.705023 CCTCCGTTCCCAAATATTTGTCTT 59.295 41.667 23.24 0.00 36.45 3.01
3939 4166 5.163652 CCTCCGTTCCCAAATATTTGTCTTC 60.164 44.000 23.24 11.96 36.45 2.87
3940 4167 5.566469 TCCGTTCCCAAATATTTGTCTTCT 58.434 37.500 23.24 0.00 36.45 2.85
3941 4168 6.713276 TCCGTTCCCAAATATTTGTCTTCTA 58.287 36.000 23.24 4.37 36.45 2.10
3942 4169 6.821665 TCCGTTCCCAAATATTTGTCTTCTAG 59.178 38.462 23.24 8.85 36.45 2.43
3943 4170 6.821665 CCGTTCCCAAATATTTGTCTTCTAGA 59.178 38.462 23.24 8.29 36.45 2.43
3944 4171 7.011482 CCGTTCCCAAATATTTGTCTTCTAGAG 59.989 40.741 23.24 7.62 36.45 2.43
3945 4172 7.764443 CGTTCCCAAATATTTGTCTTCTAGAGA 59.236 37.037 23.24 6.49 36.45 3.10
3946 4173 9.620259 GTTCCCAAATATTTGTCTTCTAGAGAT 57.380 33.333 23.24 0.00 36.61 2.75
3956 4183 8.964476 TTTGTCTTCTAGAGATTTCAACAAGT 57.036 30.769 0.00 0.00 36.61 3.16
3957 4184 7.953158 TGTCTTCTAGAGATTTCAACAAGTG 57.047 36.000 0.00 0.00 36.61 3.16
3958 4185 7.726216 TGTCTTCTAGAGATTTCAACAAGTGA 58.274 34.615 0.00 0.00 36.61 3.41
3959 4186 7.653713 TGTCTTCTAGAGATTTCAACAAGTGAC 59.346 37.037 0.00 0.00 34.40 3.67
3960 4187 7.870445 GTCTTCTAGAGATTTCAACAAGTGACT 59.130 37.037 0.00 0.00 34.40 3.41
3961 4188 9.078990 TCTTCTAGAGATTTCAACAAGTGACTA 57.921 33.333 0.00 0.00 35.39 2.59
3962 4189 9.134734 CTTCTAGAGATTTCAACAAGTGACTAC 57.865 37.037 0.00 0.00 35.39 2.73
3963 4190 7.306213 TCTAGAGATTTCAACAAGTGACTACG 58.694 38.462 0.00 0.00 35.39 3.51
3964 4191 5.844004 AGAGATTTCAACAAGTGACTACGT 58.156 37.500 0.00 0.00 35.39 3.57
3965 4192 6.978338 AGAGATTTCAACAAGTGACTACGTA 58.022 36.000 0.00 0.00 35.39 3.57
3966 4193 7.603651 AGAGATTTCAACAAGTGACTACGTAT 58.396 34.615 0.00 0.00 35.39 3.06
3967 4194 7.542477 AGAGATTTCAACAAGTGACTACGTATG 59.458 37.037 0.00 0.00 35.39 2.39
3968 4195 6.590292 AGATTTCAACAAGTGACTACGTATGG 59.410 38.462 0.00 0.00 35.39 2.74
3969 4196 5.456548 TTCAACAAGTGACTACGTATGGA 57.543 39.130 0.00 0.00 35.39 3.41
3970 4197 5.055642 TCAACAAGTGACTACGTATGGAG 57.944 43.478 0.00 0.00 0.00 3.86
3971 4198 3.505464 ACAAGTGACTACGTATGGAGC 57.495 47.619 0.00 0.00 0.00 4.70
3972 4199 2.823747 ACAAGTGACTACGTATGGAGCA 59.176 45.455 0.00 0.00 0.00 4.26
3973 4200 3.257375 ACAAGTGACTACGTATGGAGCAA 59.743 43.478 0.00 0.00 0.00 3.91
3974 4201 4.242475 CAAGTGACTACGTATGGAGCAAA 58.758 43.478 0.00 0.00 0.00 3.68
3975 4202 4.530710 AGTGACTACGTATGGAGCAAAA 57.469 40.909 0.00 0.00 0.00 2.44
3976 4203 5.086104 AGTGACTACGTATGGAGCAAAAT 57.914 39.130 0.00 0.00 0.00 1.82
3977 4204 4.870426 AGTGACTACGTATGGAGCAAAATG 59.130 41.667 0.00 0.00 0.00 2.32
3978 4205 4.868171 GTGACTACGTATGGAGCAAAATGA 59.132 41.667 0.00 0.00 0.00 2.57
3979 4206 5.005779 GTGACTACGTATGGAGCAAAATGAG 59.994 44.000 0.00 0.00 0.00 2.90
3980 4207 5.086104 ACTACGTATGGAGCAAAATGAGT 57.914 39.130 0.00 0.00 0.00 3.41
3981 4208 4.870426 ACTACGTATGGAGCAAAATGAGTG 59.130 41.667 0.00 0.00 0.00 3.51
3982 4209 3.937814 ACGTATGGAGCAAAATGAGTGA 58.062 40.909 0.00 0.00 0.00 3.41
3983 4210 4.323417 ACGTATGGAGCAAAATGAGTGAA 58.677 39.130 0.00 0.00 0.00 3.18
3984 4211 4.943705 ACGTATGGAGCAAAATGAGTGAAT 59.056 37.500 0.00 0.00 0.00 2.57
3985 4212 5.065218 ACGTATGGAGCAAAATGAGTGAATC 59.935 40.000 0.00 0.00 0.00 2.52
3986 4213 5.295292 CGTATGGAGCAAAATGAGTGAATCT 59.705 40.000 0.00 0.00 0.00 2.40
3987 4214 6.479990 CGTATGGAGCAAAATGAGTGAATCTA 59.520 38.462 0.00 0.00 0.00 1.98
3988 4215 6.690194 ATGGAGCAAAATGAGTGAATCTAC 57.310 37.500 0.00 0.00 0.00 2.59
3989 4216 5.559770 TGGAGCAAAATGAGTGAATCTACA 58.440 37.500 0.00 0.00 0.00 2.74
3990 4217 5.412594 TGGAGCAAAATGAGTGAATCTACAC 59.587 40.000 0.00 0.00 40.60 2.90
4023 4250 7.956328 ATGTCTATATACATCCGTATGTGGT 57.044 36.000 3.56 0.00 45.99 4.16
4025 4252 8.502105 TGTCTATATACATCCGTATGTGGTAG 57.498 38.462 3.56 3.93 45.99 3.18
4026 4253 8.105197 TGTCTATATACATCCGTATGTGGTAGT 58.895 37.037 3.56 0.00 45.99 2.73
4027 4254 8.954350 GTCTATATACATCCGTATGTGGTAGTT 58.046 37.037 3.56 0.00 45.99 2.24
4028 4255 9.170734 TCTATATACATCCGTATGTGGTAGTTC 57.829 37.037 3.56 0.00 45.99 3.01
4029 4256 7.770366 ATATACATCCGTATGTGGTAGTTCA 57.230 36.000 3.56 0.00 45.99 3.18
4030 4257 6.665992 ATACATCCGTATGTGGTAGTTCAT 57.334 37.500 3.56 0.00 45.99 2.57
4031 4258 5.353394 ACATCCGTATGTGGTAGTTCATT 57.647 39.130 0.00 0.00 44.79 2.57
4032 4259 5.741011 ACATCCGTATGTGGTAGTTCATTT 58.259 37.500 0.00 0.00 44.79 2.32
4033 4260 5.584649 ACATCCGTATGTGGTAGTTCATTTG 59.415 40.000 0.00 0.00 44.79 2.32
4034 4261 5.408880 TCCGTATGTGGTAGTTCATTTGA 57.591 39.130 0.00 0.00 0.00 2.69
4035 4262 5.795972 TCCGTATGTGGTAGTTCATTTGAA 58.204 37.500 0.00 0.00 0.00 2.69
4036 4263 6.231951 TCCGTATGTGGTAGTTCATTTGAAA 58.768 36.000 0.00 0.00 35.58 2.69
4037 4264 6.882140 TCCGTATGTGGTAGTTCATTTGAAAT 59.118 34.615 0.00 0.00 35.58 2.17
4038 4265 7.065324 TCCGTATGTGGTAGTTCATTTGAAATC 59.935 37.037 0.00 0.00 35.58 2.17
4039 4266 7.065803 CCGTATGTGGTAGTTCATTTGAAATCT 59.934 37.037 0.00 0.00 35.58 2.40
4040 4267 8.116753 CGTATGTGGTAGTTCATTTGAAATCTC 58.883 37.037 0.00 0.00 35.58 2.75
4041 4268 9.167311 GTATGTGGTAGTTCATTTGAAATCTCT 57.833 33.333 0.00 0.00 35.58 3.10
4043 4270 9.739276 ATGTGGTAGTTCATTTGAAATCTCTAA 57.261 29.630 0.00 0.00 35.58 2.10
4044 4271 9.567776 TGTGGTAGTTCATTTGAAATCTCTAAA 57.432 29.630 0.00 0.00 35.58 1.85
4068 4295 9.908152 AAAAAGACAAATATTTTAGGAACGGAG 57.092 29.630 0.00 0.00 29.16 4.63
4069 4296 7.625828 AAGACAAATATTTTAGGAACGGAGG 57.374 36.000 0.00 0.00 0.00 4.30
4070 4297 6.120220 AGACAAATATTTTAGGAACGGAGGG 58.880 40.000 0.00 0.00 0.00 4.30
4071 4298 6.069705 ACAAATATTTTAGGAACGGAGGGA 57.930 37.500 0.00 0.00 0.00 4.20
4082 4309 4.161754 AGGAACGGAGGGAGTAAATTACTG 59.838 45.833 10.76 0.00 39.59 2.74
4087 4314 4.442893 CGGAGGGAGTAAATTACTGATGCA 60.443 45.833 10.76 0.00 39.59 3.96
4206 4433 0.396435 TTGGGTAGACAGGCAGTGTG 59.604 55.000 0.00 0.00 40.56 3.82
4223 4450 6.090783 GCAGTGTGAATTATGATGGCATATG 58.909 40.000 0.00 0.00 36.89 1.78
4228 4455 6.600427 TGTGAATTATGATGGCATATGCTAGG 59.400 38.462 26.12 0.00 41.70 3.02
4236 4463 3.804036 TGGCATATGCTAGGTGTGTAAC 58.196 45.455 26.12 6.45 41.70 2.50
4254 4481 5.638234 GTGTAACCTGAATGTACAAGAGGAC 59.362 44.000 19.77 11.65 0.00 3.85
4256 4483 4.273148 ACCTGAATGTACAAGAGGACAC 57.727 45.455 19.77 0.54 0.00 3.67
4294 4537 5.426504 TGTTGTTTGGTTGAAGATGCATTT 58.573 33.333 0.00 0.00 0.00 2.32
4295 4538 5.879223 TGTTGTTTGGTTGAAGATGCATTTT 59.121 32.000 0.00 0.00 0.00 1.82
4296 4539 7.044181 TGTTGTTTGGTTGAAGATGCATTTTA 58.956 30.769 0.00 0.00 0.00 1.52
4297 4540 7.714377 TGTTGTTTGGTTGAAGATGCATTTTAT 59.286 29.630 0.00 0.00 0.00 1.40
4298 4541 8.558700 GTTGTTTGGTTGAAGATGCATTTTATT 58.441 29.630 0.00 0.00 0.00 1.40
4299 4542 8.674263 TGTTTGGTTGAAGATGCATTTTATTT 57.326 26.923 0.00 0.00 0.00 1.40
4300 4543 9.118300 TGTTTGGTTGAAGATGCATTTTATTTT 57.882 25.926 0.00 0.00 0.00 1.82
4331 4575 6.874297 TTTGCGAATCAAAGATGCATTTAG 57.126 33.333 0.00 0.00 39.58 1.85
4413 4875 4.766970 GCGATCAGCTAGCCATGT 57.233 55.556 12.13 0.00 44.04 3.21
4414 4876 2.997899 GCGATCAGCTAGCCATGTT 58.002 52.632 12.13 0.00 44.04 2.71
4415 4877 1.303309 GCGATCAGCTAGCCATGTTT 58.697 50.000 12.13 0.00 44.04 2.83
4416 4878 1.672881 GCGATCAGCTAGCCATGTTTT 59.327 47.619 12.13 0.00 44.04 2.43
4417 4879 2.286654 GCGATCAGCTAGCCATGTTTTC 60.287 50.000 12.13 3.27 44.04 2.29
4418 4880 2.938451 CGATCAGCTAGCCATGTTTTCA 59.062 45.455 12.13 0.00 0.00 2.69
4419 4881 3.242543 CGATCAGCTAGCCATGTTTTCAC 60.243 47.826 12.13 0.00 0.00 3.18
4420 4882 3.138884 TCAGCTAGCCATGTTTTCACA 57.861 42.857 12.13 0.00 37.31 3.58
4421 4883 3.689347 TCAGCTAGCCATGTTTTCACAT 58.311 40.909 12.13 0.00 45.18 3.21
4422 4884 4.081406 TCAGCTAGCCATGTTTTCACATT 58.919 39.130 12.13 0.00 41.16 2.71
4423 4885 4.523943 TCAGCTAGCCATGTTTTCACATTT 59.476 37.500 12.13 0.00 41.16 2.32
4424 4886 5.010922 TCAGCTAGCCATGTTTTCACATTTT 59.989 36.000 12.13 0.00 41.16 1.82
4425 4887 5.346822 CAGCTAGCCATGTTTTCACATTTTC 59.653 40.000 12.13 0.00 41.16 2.29
4426 4888 5.244626 AGCTAGCCATGTTTTCACATTTTCT 59.755 36.000 12.13 0.00 41.16 2.52
4427 4889 6.434028 AGCTAGCCATGTTTTCACATTTTCTA 59.566 34.615 12.13 0.00 41.16 2.10
4428 4890 6.749118 GCTAGCCATGTTTTCACATTTTCTAG 59.251 38.462 2.29 9.08 41.16 2.43
4429 4891 5.473039 AGCCATGTTTTCACATTTTCTAGC 58.527 37.500 0.00 0.00 41.16 3.42
4430 4892 4.324402 GCCATGTTTTCACATTTTCTAGCG 59.676 41.667 0.00 0.00 41.16 4.26
4431 4893 4.858692 CCATGTTTTCACATTTTCTAGCGG 59.141 41.667 0.00 0.00 41.16 5.52
4432 4894 5.335583 CCATGTTTTCACATTTTCTAGCGGA 60.336 40.000 0.00 0.00 41.16 5.54
4433 4895 5.356882 TGTTTTCACATTTTCTAGCGGAG 57.643 39.130 0.00 0.00 0.00 4.63
4448 4910 2.890808 CGGAGCATGTATGTACAGGT 57.109 50.000 0.33 0.00 39.90 4.00
4450 4912 4.316205 CGGAGCATGTATGTACAGGTAA 57.684 45.455 0.33 0.00 39.90 2.85
4451 4913 4.689071 CGGAGCATGTATGTACAGGTAAA 58.311 43.478 0.33 0.00 39.90 2.01
4452 4914 4.745125 CGGAGCATGTATGTACAGGTAAAG 59.255 45.833 0.33 0.00 39.90 1.85
4453 4915 5.057149 GGAGCATGTATGTACAGGTAAAGG 58.943 45.833 0.33 0.00 39.90 3.11
4454 4916 5.163343 GGAGCATGTATGTACAGGTAAAGGA 60.163 44.000 0.33 0.00 39.90 3.36
4455 4917 6.464465 GGAGCATGTATGTACAGGTAAAGGAT 60.464 42.308 0.33 0.00 39.90 3.24
4456 4918 6.525629 AGCATGTATGTACAGGTAAAGGATC 58.474 40.000 0.33 0.00 39.90 3.36
4457 4919 5.701290 GCATGTATGTACAGGTAAAGGATCC 59.299 44.000 2.48 2.48 39.90 3.36
4458 4920 6.687901 GCATGTATGTACAGGTAAAGGATCCA 60.688 42.308 15.82 0.00 39.90 3.41
4459 4921 6.229936 TGTATGTACAGGTAAAGGATCCAC 57.770 41.667 15.82 3.00 0.00 4.02
4460 4922 4.772886 ATGTACAGGTAAAGGATCCACC 57.227 45.455 15.82 13.14 39.35 4.61
4461 4923 2.498481 TGTACAGGTAAAGGATCCACCG 59.502 50.000 15.82 11.36 44.74 4.94
4462 4924 1.652947 ACAGGTAAAGGATCCACCGT 58.347 50.000 15.82 11.95 44.74 4.83
4463 4925 1.982958 ACAGGTAAAGGATCCACCGTT 59.017 47.619 15.82 4.93 44.74 4.44
4464 4926 2.027469 ACAGGTAAAGGATCCACCGTTC 60.027 50.000 15.82 0.00 44.74 3.95
4465 4927 1.206371 AGGTAAAGGATCCACCGTTCG 59.794 52.381 15.82 0.00 44.74 3.95
4466 4928 1.004595 GTAAAGGATCCACCGTTCGC 58.995 55.000 15.82 0.00 44.74 4.70
4467 4929 0.609151 TAAAGGATCCACCGTTCGCA 59.391 50.000 15.82 0.00 44.74 5.10
4468 4930 0.250553 AAAGGATCCACCGTTCGCAA 60.251 50.000 15.82 0.00 44.74 4.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
235 242 2.669569 CTGGGGGTTGTGCAGTCG 60.670 66.667 0.00 0.00 0.00 4.18
376 383 2.493278 CCTCGACAATGGCTCCAAATTT 59.507 45.455 0.00 0.00 0.00 1.82
532 539 2.178912 ACAAAAAGAAGATCGCCGGA 57.821 45.000 5.05 0.00 0.00 5.14
626 634 2.579410 AACTAACACATGGGACCCAC 57.421 50.000 17.78 0.00 35.80 4.61
627 635 2.714250 AGAAACTAACACATGGGACCCA 59.286 45.455 17.73 17.73 38.19 4.51
628 636 3.434940 AGAAACTAACACATGGGACCC 57.565 47.619 0.00 2.45 0.00 4.46
629 637 4.142038 ACAAGAAACTAACACATGGGACC 58.858 43.478 0.00 0.00 0.00 4.46
630 638 5.767816 AACAAGAAACTAACACATGGGAC 57.232 39.130 0.00 0.00 0.00 4.46
631 639 5.888724 TCAAACAAGAAACTAACACATGGGA 59.111 36.000 0.00 0.00 0.00 4.37
632 640 5.977129 GTCAAACAAGAAACTAACACATGGG 59.023 40.000 0.00 0.00 0.00 4.00
633 641 6.559810 TGTCAAACAAGAAACTAACACATGG 58.440 36.000 0.00 0.00 0.00 3.66
634 642 8.533965 CATTGTCAAACAAGAAACTAACACATG 58.466 33.333 0.00 0.00 41.94 3.21
635 643 8.250332 ACATTGTCAAACAAGAAACTAACACAT 58.750 29.630 0.00 0.00 41.94 3.21
636 644 7.598278 ACATTGTCAAACAAGAAACTAACACA 58.402 30.769 0.00 0.00 41.94 3.72
637 645 9.562583 TTACATTGTCAAACAAGAAACTAACAC 57.437 29.630 0.00 0.00 41.94 3.32
642 650 7.702348 GCTCTTTACATTGTCAAACAAGAAACT 59.298 33.333 0.00 0.00 41.94 2.66
643 651 7.487829 TGCTCTTTACATTGTCAAACAAGAAAC 59.512 33.333 0.00 0.00 41.94 2.78
644 652 7.542890 TGCTCTTTACATTGTCAAACAAGAAA 58.457 30.769 0.00 0.00 41.94 2.52
645 653 7.094508 TGCTCTTTACATTGTCAAACAAGAA 57.905 32.000 0.00 0.00 41.94 2.52
646 654 6.691754 TGCTCTTTACATTGTCAAACAAGA 57.308 33.333 0.00 0.00 41.94 3.02
647 655 7.935338 AATGCTCTTTACATTGTCAAACAAG 57.065 32.000 0.00 0.00 41.94 3.16
648 656 8.196771 AGAAATGCTCTTTACATTGTCAAACAA 58.803 29.630 0.00 0.00 42.95 2.83
649 657 7.715657 AGAAATGCTCTTTACATTGTCAAACA 58.284 30.769 0.00 0.00 37.78 2.83
650 658 8.579682 AAGAAATGCTCTTTACATTGTCAAAC 57.420 30.769 0.00 0.00 41.97 2.93
653 661 9.453572 AGATAAGAAATGCTCTTTACATTGTCA 57.546 29.630 0.00 0.00 41.97 3.58
656 664 9.017669 GCAAGATAAGAAATGCTCTTTACATTG 57.982 33.333 0.00 0.00 41.97 2.82
657 665 7.912250 CGCAAGATAAGAAATGCTCTTTACATT 59.088 33.333 0.00 0.00 42.31 2.71
658 666 7.280876 TCGCAAGATAAGAAATGCTCTTTACAT 59.719 33.333 0.00 0.00 41.23 2.29
659 667 6.593770 TCGCAAGATAAGAAATGCTCTTTACA 59.406 34.615 0.00 0.00 41.23 2.41
660 668 7.005062 TCGCAAGATAAGAAATGCTCTTTAC 57.995 36.000 0.00 0.00 41.23 2.01
680 688 9.603298 CAGTACTAAAACGACTATATTATCGCA 57.397 33.333 0.00 0.00 42.12 5.10
681 689 9.817365 TCAGTACTAAAACGACTATATTATCGC 57.183 33.333 0.00 0.00 42.12 4.58
694 702 9.353353 CGCAATACATTATTCAGTACTAAAACG 57.647 33.333 0.00 0.00 0.00 3.60
695 703 9.646336 CCGCAATACATTATTCAGTACTAAAAC 57.354 33.333 0.00 0.00 0.00 2.43
696 704 8.339714 GCCGCAATACATTATTCAGTACTAAAA 58.660 33.333 0.00 0.00 0.00 1.52
697 705 7.496263 TGCCGCAATACATTATTCAGTACTAAA 59.504 33.333 0.00 0.00 0.00 1.85
698 706 6.987404 TGCCGCAATACATTATTCAGTACTAA 59.013 34.615 0.00 0.00 0.00 2.24
699 707 6.517605 TGCCGCAATACATTATTCAGTACTA 58.482 36.000 0.00 0.00 0.00 1.82
700 708 5.364778 TGCCGCAATACATTATTCAGTACT 58.635 37.500 0.00 0.00 0.00 2.73
701 709 5.666969 TGCCGCAATACATTATTCAGTAC 57.333 39.130 0.00 0.00 0.00 2.73
702 710 5.820423 AGTTGCCGCAATACATTATTCAGTA 59.180 36.000 9.46 0.00 0.00 2.74
703 711 4.640201 AGTTGCCGCAATACATTATTCAGT 59.360 37.500 9.46 0.00 0.00 3.41
704 712 5.173774 AGTTGCCGCAATACATTATTCAG 57.826 39.130 9.46 0.00 0.00 3.02
705 713 5.574891 AAGTTGCCGCAATACATTATTCA 57.425 34.783 9.46 0.00 0.00 2.57
706 714 6.033341 TCAAAGTTGCCGCAATACATTATTC 58.967 36.000 9.46 0.00 0.00 1.75
707 715 5.960113 TCAAAGTTGCCGCAATACATTATT 58.040 33.333 9.46 0.00 0.00 1.40
708 716 5.574891 TCAAAGTTGCCGCAATACATTAT 57.425 34.783 9.46 0.00 0.00 1.28
709 717 5.574891 ATCAAAGTTGCCGCAATACATTA 57.425 34.783 9.46 0.00 0.00 1.90
710 718 3.932545 TCAAAGTTGCCGCAATACATT 57.067 38.095 9.46 0.00 0.00 2.71
711 719 4.082300 TGAATCAAAGTTGCCGCAATACAT 60.082 37.500 9.46 0.00 0.00 2.29
712 720 3.254411 TGAATCAAAGTTGCCGCAATACA 59.746 39.130 9.46 0.00 0.00 2.29
713 721 3.832276 TGAATCAAAGTTGCCGCAATAC 58.168 40.909 9.46 0.00 0.00 1.89
714 722 4.398988 AGATGAATCAAAGTTGCCGCAATA 59.601 37.500 9.46 0.00 0.00 1.90
715 723 3.194116 AGATGAATCAAAGTTGCCGCAAT 59.806 39.130 9.46 0.00 0.00 3.56
716 724 2.557924 AGATGAATCAAAGTTGCCGCAA 59.442 40.909 0.38 0.38 0.00 4.85
717 725 2.095110 CAGATGAATCAAAGTTGCCGCA 60.095 45.455 0.00 0.00 0.00 5.69
718 726 2.523015 CAGATGAATCAAAGTTGCCGC 58.477 47.619 0.00 0.00 0.00 6.53
719 727 2.095110 TGCAGATGAATCAAAGTTGCCG 60.095 45.455 8.40 0.00 0.00 5.69
720 728 3.581024 TGCAGATGAATCAAAGTTGCC 57.419 42.857 8.40 0.00 0.00 4.52
721 729 5.670341 GCAAATGCAGATGAATCAAAGTTGC 60.670 40.000 5.75 8.33 41.59 4.17
722 730 5.854157 GCAAATGCAGATGAATCAAAGTTG 58.146 37.500 5.75 0.00 41.59 3.16
757 765 1.821666 CGCCTCTTCCTTCCCCAAAAA 60.822 52.381 0.00 0.00 0.00 1.94
758 766 0.251165 CGCCTCTTCCTTCCCCAAAA 60.251 55.000 0.00 0.00 0.00 2.44
759 767 1.131303 TCGCCTCTTCCTTCCCCAAA 61.131 55.000 0.00 0.00 0.00 3.28
760 768 1.537889 TCGCCTCTTCCTTCCCCAA 60.538 57.895 0.00 0.00 0.00 4.12
761 769 1.990060 CTCGCCTCTTCCTTCCCCA 60.990 63.158 0.00 0.00 0.00 4.96
762 770 1.265454 TTCTCGCCTCTTCCTTCCCC 61.265 60.000 0.00 0.00 0.00 4.81
763 771 0.108089 GTTCTCGCCTCTTCCTTCCC 60.108 60.000 0.00 0.00 0.00 3.97
764 772 0.608640 TGTTCTCGCCTCTTCCTTCC 59.391 55.000 0.00 0.00 0.00 3.46
765 773 2.457366 TTGTTCTCGCCTCTTCCTTC 57.543 50.000 0.00 0.00 0.00 3.46
766 774 2.039084 ACATTGTTCTCGCCTCTTCCTT 59.961 45.455 0.00 0.00 0.00 3.36
767 775 1.625818 ACATTGTTCTCGCCTCTTCCT 59.374 47.619 0.00 0.00 0.00 3.36
768 776 2.100605 ACATTGTTCTCGCCTCTTCC 57.899 50.000 0.00 0.00 0.00 3.46
769 777 3.585862 TGTACATTGTTCTCGCCTCTTC 58.414 45.455 0.00 0.00 0.00 2.87
770 778 3.678056 TGTACATTGTTCTCGCCTCTT 57.322 42.857 0.00 0.00 0.00 2.85
771 779 3.589988 CTTGTACATTGTTCTCGCCTCT 58.410 45.455 0.00 0.00 0.00 3.69
772 780 2.673368 CCTTGTACATTGTTCTCGCCTC 59.327 50.000 0.00 0.00 0.00 4.70
773 781 2.615493 CCCTTGTACATTGTTCTCGCCT 60.615 50.000 0.00 0.00 0.00 5.52
774 782 1.737793 CCCTTGTACATTGTTCTCGCC 59.262 52.381 0.00 0.00 0.00 5.54
775 783 2.415512 GTCCCTTGTACATTGTTCTCGC 59.584 50.000 0.00 0.00 0.00 5.03
776 784 3.659786 TGTCCCTTGTACATTGTTCTCG 58.340 45.455 0.00 0.00 0.00 4.04
777 785 5.940470 AGATTGTCCCTTGTACATTGTTCTC 59.060 40.000 0.00 0.00 0.00 2.87
778 786 5.880901 AGATTGTCCCTTGTACATTGTTCT 58.119 37.500 0.00 0.00 0.00 3.01
779 787 6.575162 AAGATTGTCCCTTGTACATTGTTC 57.425 37.500 0.00 0.00 0.00 3.18
780 788 6.976934 AAAGATTGTCCCTTGTACATTGTT 57.023 33.333 0.00 0.00 0.00 2.83
781 789 6.549364 TGAAAAGATTGTCCCTTGTACATTGT 59.451 34.615 0.00 0.00 0.00 2.71
782 790 6.980593 TGAAAAGATTGTCCCTTGTACATTG 58.019 36.000 0.00 0.00 0.00 2.82
783 791 7.781324 ATGAAAAGATTGTCCCTTGTACATT 57.219 32.000 0.00 0.00 0.00 2.71
784 792 7.781324 AATGAAAAGATTGTCCCTTGTACAT 57.219 32.000 0.00 0.00 0.00 2.29
785 793 7.595819 AAATGAAAAGATTGTCCCTTGTACA 57.404 32.000 0.00 0.00 0.00 2.90
786 794 8.887036 AAAAATGAAAAGATTGTCCCTTGTAC 57.113 30.769 0.00 0.00 0.00 2.90
808 816 9.801873 CTGGAAAGAAAACATACTTCTCAAAAA 57.198 29.630 0.00 0.00 31.85 1.94
809 817 7.920682 GCTGGAAAGAAAACATACTTCTCAAAA 59.079 33.333 0.00 0.00 31.85 2.44
810 818 7.068103 TGCTGGAAAGAAAACATACTTCTCAAA 59.932 33.333 0.00 0.00 31.85 2.69
811 819 6.545666 TGCTGGAAAGAAAACATACTTCTCAA 59.454 34.615 0.00 0.00 31.85 3.02
812 820 6.061441 TGCTGGAAAGAAAACATACTTCTCA 58.939 36.000 0.00 0.00 31.85 3.27
813 821 6.560253 TGCTGGAAAGAAAACATACTTCTC 57.440 37.500 0.00 0.00 31.85 2.87
814 822 7.530426 AATGCTGGAAAGAAAACATACTTCT 57.470 32.000 0.00 0.00 34.56 2.85
815 823 8.593492 AAAATGCTGGAAAGAAAACATACTTC 57.407 30.769 0.00 0.00 0.00 3.01
816 824 8.962884 AAAAATGCTGGAAAGAAAACATACTT 57.037 26.923 0.00 0.00 0.00 2.24
838 846 7.288389 TCCCTAGTAGTACACACTTCTCAAAAA 59.712 37.037 2.52 0.00 34.56 1.94
839 847 6.779049 TCCCTAGTAGTACACACTTCTCAAAA 59.221 38.462 2.52 0.00 34.56 2.44
840 848 6.208204 GTCCCTAGTAGTACACACTTCTCAAA 59.792 42.308 2.52 0.00 34.56 2.69
841 849 5.709164 GTCCCTAGTAGTACACACTTCTCAA 59.291 44.000 2.52 0.00 34.56 3.02
842 850 5.221986 TGTCCCTAGTAGTACACACTTCTCA 60.222 44.000 2.52 0.00 34.56 3.27
843 851 5.251764 TGTCCCTAGTAGTACACACTTCTC 58.748 45.833 2.52 0.00 34.56 2.87
844 852 5.252586 TGTCCCTAGTAGTACACACTTCT 57.747 43.478 2.52 0.00 36.49 2.85
845 853 5.972107 TTGTCCCTAGTAGTACACACTTC 57.028 43.478 2.52 0.00 36.14 3.01
846 854 6.014647 TGATTGTCCCTAGTAGTACACACTT 58.985 40.000 2.52 0.00 36.14 3.16
847 855 5.577100 TGATTGTCCCTAGTAGTACACACT 58.423 41.667 2.52 0.15 38.91 3.55
848 856 5.909621 TGATTGTCCCTAGTAGTACACAC 57.090 43.478 2.52 0.00 0.00 3.82
849 857 7.201884 GCTTATGATTGTCCCTAGTAGTACACA 60.202 40.741 2.52 0.00 0.00 3.72
850 858 7.146648 GCTTATGATTGTCCCTAGTAGTACAC 58.853 42.308 2.52 0.00 0.00 2.90
851 859 6.267014 GGCTTATGATTGTCCCTAGTAGTACA 59.733 42.308 2.52 0.00 0.00 2.90
852 860 6.295180 GGGCTTATGATTGTCCCTAGTAGTAC 60.295 46.154 0.00 0.00 34.19 2.73
853 861 5.778750 GGGCTTATGATTGTCCCTAGTAGTA 59.221 44.000 0.00 0.00 34.19 1.82
854 862 4.593634 GGGCTTATGATTGTCCCTAGTAGT 59.406 45.833 0.00 0.00 34.19 2.73
855 863 4.841246 AGGGCTTATGATTGTCCCTAGTAG 59.159 45.833 0.00 0.00 45.03 2.57
856 864 4.593206 CAGGGCTTATGATTGTCCCTAGTA 59.407 45.833 0.00 0.00 45.08 1.82
857 865 3.392616 CAGGGCTTATGATTGTCCCTAGT 59.607 47.826 0.00 0.00 45.08 2.57
858 866 3.244700 CCAGGGCTTATGATTGTCCCTAG 60.245 52.174 0.00 0.00 45.08 3.02
859 867 2.711009 CCAGGGCTTATGATTGTCCCTA 59.289 50.000 0.00 0.00 45.08 3.53
861 869 1.215423 ACCAGGGCTTATGATTGTCCC 59.785 52.381 0.00 0.00 37.24 4.46
862 870 2.736670 ACCAGGGCTTATGATTGTCC 57.263 50.000 0.00 0.00 0.00 4.02
863 871 4.096984 CAGAAACCAGGGCTTATGATTGTC 59.903 45.833 0.00 0.00 0.00 3.18
864 872 4.019174 CAGAAACCAGGGCTTATGATTGT 58.981 43.478 0.00 0.00 0.00 2.71
865 873 3.382546 CCAGAAACCAGGGCTTATGATTG 59.617 47.826 0.00 0.00 0.00 2.67
866 874 3.628257 CCCAGAAACCAGGGCTTATGATT 60.628 47.826 0.00 0.00 38.44 2.57
867 875 2.091665 CCCAGAAACCAGGGCTTATGAT 60.092 50.000 0.00 0.00 38.44 2.45
868 876 1.284785 CCCAGAAACCAGGGCTTATGA 59.715 52.381 0.00 0.00 38.44 2.15
869 877 1.767759 CCCAGAAACCAGGGCTTATG 58.232 55.000 0.00 0.00 38.44 1.90
876 884 1.351076 AAAATGGCCCAGAAACCAGG 58.649 50.000 0.00 0.00 39.88 4.45
877 885 2.610232 CGAAAAATGGCCCAGAAACCAG 60.610 50.000 0.00 0.00 39.88 4.00
878 886 1.342819 CGAAAAATGGCCCAGAAACCA 59.657 47.619 0.00 0.00 41.06 3.67
879 887 1.337728 CCGAAAAATGGCCCAGAAACC 60.338 52.381 0.00 0.00 0.00 3.27
880 888 1.616374 TCCGAAAAATGGCCCAGAAAC 59.384 47.619 0.00 0.00 0.00 2.78
881 889 1.616374 GTCCGAAAAATGGCCCAGAAA 59.384 47.619 0.00 0.00 0.00 2.52
882 890 1.203001 AGTCCGAAAAATGGCCCAGAA 60.203 47.619 0.00 0.00 0.00 3.02
883 891 0.404040 AGTCCGAAAAATGGCCCAGA 59.596 50.000 0.00 0.00 0.00 3.86
884 892 0.527565 CAGTCCGAAAAATGGCCCAG 59.472 55.000 0.00 0.00 0.00 4.45
926 934 1.192146 TGGACTGGAGGAGGAAACCG 61.192 60.000 0.00 0.00 34.73 4.44
963 971 4.292178 CCCCTCTCTCGCCGATGC 62.292 72.222 0.00 0.00 0.00 3.91
1068 1111 2.670592 TTCGTGAGGTCGGCGAGA 60.671 61.111 11.20 0.00 36.00 4.04
1263 1306 2.242047 GCTACTAAGCTGGCCCTTAC 57.758 55.000 0.00 0.00 45.85 2.34
1318 1361 1.065418 GCTAGGCAAGGCTAGGAACAA 60.065 52.381 25.87 0.00 0.00 2.83
1328 1371 3.161450 TAGGGGCGCTAGGCAAGG 61.161 66.667 7.64 0.00 46.16 3.61
1329 1372 2.423446 CTAGGGGCGCTAGGCAAG 59.577 66.667 26.18 7.25 46.16 4.01
1330 1373 3.861797 GCTAGGGGCGCTAGGCAA 61.862 66.667 31.88 5.83 46.16 4.52
1333 1376 1.979693 CTAGGCTAGGGGCGCTAGG 60.980 68.421 31.88 16.57 42.94 3.02
1334 1377 1.979693 CCTAGGCTAGGGGCGCTAG 60.980 68.421 29.55 28.62 42.42 3.42
1335 1378 2.117640 CCTAGGCTAGGGGCGCTA 59.882 66.667 29.55 11.09 42.42 4.26
1416 1473 3.282021 TGCTGGTAGGATCAAATTCAGC 58.718 45.455 15.56 15.56 44.24 4.26
1425 1482 2.744202 CGCCAATATTGCTGGTAGGATC 59.256 50.000 10.11 0.00 36.24 3.36
1565 1622 1.153489 CACGGGTGAGAGCATCCAG 60.153 63.158 0.00 0.00 46.16 3.86
1734 1801 8.662141 CAAATGCCTTTTCTTCTTTCCAATATG 58.338 33.333 0.00 0.00 0.00 1.78
1758 1826 4.566545 TTCGTCGTGGAAACTAGTACAA 57.433 40.909 0.00 0.00 0.00 2.41
1836 1905 4.610605 TCTTTGACCGGATGACTGTTTA 57.389 40.909 9.46 0.00 0.00 2.01
1841 1910 5.422331 TCTCTTATTCTTTGACCGGATGACT 59.578 40.000 9.46 0.00 0.00 3.41
1848 1917 5.348997 GTGGAGTTCTCTTATTCTTTGACCG 59.651 44.000 0.00 0.00 0.00 4.79
1861 1930 3.235200 ACTAGCAAGTGTGGAGTTCTCT 58.765 45.455 0.00 0.00 33.57 3.10
1899 1968 0.038159 ACGAGGAGCAAAGTCGGAAG 60.038 55.000 0.00 0.00 38.03 3.46
1904 1973 0.714439 GCGTTACGAGGAGCAAAGTC 59.286 55.000 9.62 0.00 0.00 3.01
1906 1975 2.186076 CTAGCGTTACGAGGAGCAAAG 58.814 52.381 9.62 0.00 0.00 2.77
1916 1985 3.483574 CCAATCAAAGTGCTAGCGTTACG 60.484 47.826 10.77 0.00 0.00 3.18
1923 1992 5.712152 AAAGGAACCAATCAAAGTGCTAG 57.288 39.130 0.00 0.00 0.00 3.42
1924 1993 7.775053 AATAAAGGAACCAATCAAAGTGCTA 57.225 32.000 0.00 0.00 0.00 3.49
2029 2103 5.869888 CGTAGAAACTAGTGCCAGAAAAGAT 59.130 40.000 0.00 0.00 0.00 2.40
2121 2196 6.591834 GTGCTGATATACAACATACCTGATCC 59.408 42.308 0.00 0.00 0.00 3.36
2138 2217 1.937191 TGGTGAGTGGAGTGCTGATA 58.063 50.000 0.00 0.00 0.00 2.15
2178 2261 6.662755 TCCCAATATTCATCAAGTAAGTGCT 58.337 36.000 0.00 0.00 0.00 4.40
2188 2271 7.836479 TGTAATGCATTCCCAATATTCATCA 57.164 32.000 16.86 0.00 0.00 3.07
2191 2274 7.836479 TGATGTAATGCATTCCCAATATTCA 57.164 32.000 16.86 11.13 38.06 2.57
2253 2344 8.788806 GCTGACTAAAGCTAGAATACTAGATGA 58.211 37.037 0.00 0.00 46.34 2.92
2277 2371 5.499004 TTAGTTAAACATGAGGTGGAGCT 57.501 39.130 0.00 0.00 0.00 4.09
2294 2388 8.428063 TGGAACAAATGAATGGATGTTTTAGTT 58.572 29.630 0.00 0.00 36.22 2.24
2364 2492 1.265905 GGAATTGTGGTCGGTGTTCAC 59.734 52.381 0.00 0.00 0.00 3.18
2431 2563 2.968574 GAGGTATGCAAGGGAGAGATCA 59.031 50.000 0.00 0.00 0.00 2.92
2432 2564 2.301583 GGAGGTATGCAAGGGAGAGATC 59.698 54.545 0.00 0.00 0.00 2.75
2433 2565 2.334023 GGAGGTATGCAAGGGAGAGAT 58.666 52.381 0.00 0.00 0.00 2.75
2434 2566 1.008327 TGGAGGTATGCAAGGGAGAGA 59.992 52.381 0.00 0.00 0.00 3.10
2491 2623 1.040339 GCTGGGAGGAGATGACGTCT 61.040 60.000 17.92 0.00 40.81 4.18
2543 2679 2.156917 CTGATTGCTGAGCAGAAACCA 58.843 47.619 7.39 2.01 44.56 3.67
2599 2741 2.067932 CTGGGTGGCAAACAGGGAGA 62.068 60.000 10.83 0.00 0.00 3.71
2620 2765 6.614906 AGACTATCATGAATGGAGAAAGACCT 59.385 38.462 0.00 0.00 0.00 3.85
2671 2816 2.281970 CAGGCACAGCAGCAAGGA 60.282 61.111 0.00 0.00 35.83 3.36
2675 2820 1.228644 AAATCCAGGCACAGCAGCA 60.229 52.632 0.00 0.00 35.83 4.41
2736 2881 2.208872 ACAAGAGGCATACAAGGGGAT 58.791 47.619 0.00 0.00 0.00 3.85
2737 2882 1.668826 ACAAGAGGCATACAAGGGGA 58.331 50.000 0.00 0.00 0.00 4.81
2754 2899 5.235616 CACTAGTCTTCGCCTTTGTTTTACA 59.764 40.000 0.00 0.00 0.00 2.41
2949 3094 7.941919 AGGAGTTCACCTTCTTTTCAAAATAC 58.058 34.615 0.00 0.00 36.86 1.89
3008 3153 4.254492 CTGCTCTTCCCTTGTTACCTAAC 58.746 47.826 0.00 0.00 36.74 2.34
3076 3221 1.620819 GTCTCCAGTCTTCAGCCTTGA 59.379 52.381 0.00 0.00 0.00 3.02
3079 3224 1.254284 CCGTCTCCAGTCTTCAGCCT 61.254 60.000 0.00 0.00 0.00 4.58
3218 3363 8.900781 ACCTTCTTTTCTTCTAGTAAAACCAAC 58.099 33.333 0.00 0.00 0.00 3.77
3297 3442 1.734465 CTGCTGCTGCTTGTTACCTAC 59.266 52.381 17.00 0.00 40.48 3.18
3365 3510 1.202417 TGATGAAATCCTCGCTCGGTC 60.202 52.381 0.00 0.00 44.73 4.79
3393 3538 1.198759 TCTCCGCAAAGTAGGCCCTT 61.199 55.000 0.00 0.00 0.00 3.95
3420 3565 1.465794 ACTCCTCTACCAGCTCGAAC 58.534 55.000 0.00 0.00 0.00 3.95
3423 3568 1.546476 ACAAACTCCTCTACCAGCTCG 59.454 52.381 0.00 0.00 0.00 5.03
3510 3736 2.968006 CGCGCTCTAGAATTAAGACTCG 59.032 50.000 5.56 0.00 0.00 4.18
3706 3933 5.419542 TGTCATCACAATACCTAAGTGCTC 58.580 41.667 0.00 0.00 33.44 4.26
3711 3938 8.150296 TGGATACATGTCATCACAATACCTAAG 58.850 37.037 0.00 0.00 46.17 2.18
3784 4011 3.917760 CGTCAGGGGATCCGGCTC 61.918 72.222 5.45 0.00 38.33 4.70
3785 4012 3.369410 TACGTCAGGGGATCCGGCT 62.369 63.158 5.45 0.00 38.33 5.52
3786 4013 2.836360 TACGTCAGGGGATCCGGC 60.836 66.667 5.45 0.00 38.33 6.13
3787 4014 2.842256 CGTACGTCAGGGGATCCGG 61.842 68.421 7.22 0.00 38.33 5.14
3788 4015 2.719979 CGTACGTCAGGGGATCCG 59.280 66.667 7.22 0.00 38.33 4.18
3789 4016 3.126528 CCGTACGTCAGGGGATCC 58.873 66.667 15.21 1.92 0.00 3.36
3790 4017 2.416260 GCCGTACGTCAGGGGATC 59.584 66.667 15.21 0.00 32.45 3.36
3791 4018 3.152400 GGCCGTACGTCAGGGGAT 61.152 66.667 15.21 0.00 32.45 3.85
3792 4019 4.682334 TGGCCGTACGTCAGGGGA 62.682 66.667 15.21 0.00 32.45 4.81
3793 4020 4.446413 GTGGCCGTACGTCAGGGG 62.446 72.222 15.21 0.00 32.45 4.79
3794 4021 4.446413 GGTGGCCGTACGTCAGGG 62.446 72.222 15.21 0.00 35.13 4.45
3795 4022 3.379445 AGGTGGCCGTACGTCAGG 61.379 66.667 15.21 0.00 0.00 3.86
3796 4023 2.126071 CAGGTGGCCGTACGTCAG 60.126 66.667 15.21 0.00 0.00 3.51
3797 4024 2.598099 TCAGGTGGCCGTACGTCA 60.598 61.111 15.21 9.40 0.00 4.35
3798 4025 2.126189 GTCAGGTGGCCGTACGTC 60.126 66.667 15.21 0.00 0.00 4.34
3799 4026 4.047059 CGTCAGGTGGCCGTACGT 62.047 66.667 15.21 0.00 33.91 3.57
3800 4027 3.562779 AACGTCAGGTGGCCGTACG 62.563 63.158 8.69 8.69 40.48 3.67
3801 4028 2.025418 CAACGTCAGGTGGCCGTAC 61.025 63.158 0.00 0.00 33.88 3.67
3802 4029 2.340809 CAACGTCAGGTGGCCGTA 59.659 61.111 0.00 0.00 33.88 4.02
3808 4035 2.978010 GTGGCCCAACGTCAGGTG 60.978 66.667 0.00 0.00 34.07 4.00
3809 4036 3.168528 AGTGGCCCAACGTCAGGT 61.169 61.111 0.00 0.00 0.00 4.00
3810 4037 2.669569 CAGTGGCCCAACGTCAGG 60.670 66.667 0.00 0.00 0.00 3.86
3811 4038 1.961277 GTCAGTGGCCCAACGTCAG 60.961 63.158 0.00 0.00 0.00 3.51
3812 4039 2.110213 GTCAGTGGCCCAACGTCA 59.890 61.111 0.00 0.00 0.00 4.35
3813 4040 3.041940 CGTCAGTGGCCCAACGTC 61.042 66.667 0.00 0.00 0.00 4.34
3835 4062 4.368543 GACGTGTGGACCCGGACC 62.369 72.222 0.73 6.89 0.00 4.46
3836 4063 3.569049 CTGACGTGTGGACCCGGAC 62.569 68.421 0.73 0.00 0.00 4.79
3837 4064 3.299977 CTGACGTGTGGACCCGGA 61.300 66.667 0.73 0.00 0.00 5.14
3840 4067 3.916392 CTCGCTGACGTGTGGACCC 62.916 68.421 0.00 0.00 41.18 4.46
3841 4068 2.430921 CTCGCTGACGTGTGGACC 60.431 66.667 0.00 0.00 41.18 4.46
3842 4069 2.335369 ACTCGCTGACGTGTGGAC 59.665 61.111 0.00 0.00 43.76 4.02
3855 4082 4.746951 TGACGTACGGCGCACTCG 62.747 66.667 21.06 6.32 46.11 4.18
3856 4083 2.874780 CTGACGTACGGCGCACTC 60.875 66.667 21.06 7.29 46.11 3.51
3857 4084 3.324099 CTCTGACGTACGGCGCACT 62.324 63.158 21.06 0.00 46.11 4.40
3858 4085 2.874780 CTCTGACGTACGGCGCAC 60.875 66.667 21.06 2.50 46.11 5.34
3859 4086 4.111016 CCTCTGACGTACGGCGCA 62.111 66.667 21.06 13.22 46.11 6.09
3860 4087 3.332493 TTCCTCTGACGTACGGCGC 62.332 63.158 21.06 0.00 46.11 6.53
3862 4089 0.456312 CAGTTCCTCTGACGTACGGC 60.456 60.000 21.06 18.72 46.27 5.68
3863 4090 0.456312 GCAGTTCCTCTGACGTACGG 60.456 60.000 21.06 1.50 46.27 4.02
3864 4091 0.793478 CGCAGTTCCTCTGACGTACG 60.793 60.000 15.01 15.01 46.27 3.67
3865 4092 0.240411 ACGCAGTTCCTCTGACGTAC 59.760 55.000 12.52 0.00 46.28 3.67
3866 4093 2.637521 ACGCAGTTCCTCTGACGTA 58.362 52.632 12.52 0.00 46.28 3.57
3867 4094 3.444737 ACGCAGTTCCTCTGACGT 58.555 55.556 0.00 0.00 46.27 4.34
3879 4106 0.599204 ACCAACAACTACGGACGCAG 60.599 55.000 0.00 0.00 0.00 5.18
3880 4107 0.179078 AACCAACAACTACGGACGCA 60.179 50.000 0.00 0.00 0.00 5.24
3881 4108 0.233848 CAACCAACAACTACGGACGC 59.766 55.000 0.00 0.00 0.00 5.19
3882 4109 0.863144 CCAACCAACAACTACGGACG 59.137 55.000 0.00 0.00 0.00 4.79
3883 4110 1.957668 ACCAACCAACAACTACGGAC 58.042 50.000 0.00 0.00 0.00 4.79
3884 4111 2.683867 CAAACCAACCAACAACTACGGA 59.316 45.455 0.00 0.00 0.00 4.69
3885 4112 2.223618 CCAAACCAACCAACAACTACGG 60.224 50.000 0.00 0.00 0.00 4.02
3886 4113 2.683867 TCCAAACCAACCAACAACTACG 59.316 45.455 0.00 0.00 0.00 3.51
3891 4118 5.163395 GGAGTATTTCCAAACCAACCAACAA 60.163 40.000 0.00 0.00 46.01 2.83
3912 4139 3.577805 AATATTTGGGAACGGAGGGAG 57.422 47.619 0.00 0.00 0.00 4.30
3913 4140 3.010808 ACAAATATTTGGGAACGGAGGGA 59.989 43.478 27.43 0.00 42.34 4.20
3915 4142 4.270008 AGACAAATATTTGGGAACGGAGG 58.730 43.478 27.43 3.68 42.34 4.30
3916 4143 5.648092 AGAAGACAAATATTTGGGAACGGAG 59.352 40.000 27.43 4.34 42.34 4.63
3917 4144 5.566469 AGAAGACAAATATTTGGGAACGGA 58.434 37.500 27.43 0.00 42.34 4.69
3918 4145 5.897377 AGAAGACAAATATTTGGGAACGG 57.103 39.130 27.43 5.66 42.34 4.44
3919 4146 7.764443 TCTCTAGAAGACAAATATTTGGGAACG 59.236 37.037 27.43 12.33 42.34 3.95
3920 4147 9.620259 ATCTCTAGAAGACAAATATTTGGGAAC 57.380 33.333 27.43 17.09 42.34 3.62
3930 4157 9.566432 ACTTGTTGAAATCTCTAGAAGACAAAT 57.434 29.630 0.00 0.00 36.65 2.32
3931 4158 8.830580 CACTTGTTGAAATCTCTAGAAGACAAA 58.169 33.333 0.00 0.00 36.65 2.83
3932 4159 8.204160 TCACTTGTTGAAATCTCTAGAAGACAA 58.796 33.333 0.00 0.00 36.65 3.18
3933 4160 7.653713 GTCACTTGTTGAAATCTCTAGAAGACA 59.346 37.037 0.00 0.00 34.25 3.41
3934 4161 7.870445 AGTCACTTGTTGAAATCTCTAGAAGAC 59.130 37.037 0.00 0.00 34.25 3.01
3935 4162 7.957002 AGTCACTTGTTGAAATCTCTAGAAGA 58.043 34.615 0.00 0.00 35.39 2.87
3936 4163 9.134734 GTAGTCACTTGTTGAAATCTCTAGAAG 57.865 37.037 0.00 0.00 35.39 2.85
3937 4164 7.808381 CGTAGTCACTTGTTGAAATCTCTAGAA 59.192 37.037 0.00 0.00 35.39 2.10
3938 4165 7.040617 ACGTAGTCACTTGTTGAAATCTCTAGA 60.041 37.037 0.00 0.00 29.74 2.43
3939 4166 7.085116 ACGTAGTCACTTGTTGAAATCTCTAG 58.915 38.462 0.00 0.00 29.74 2.43
3940 4167 6.978338 ACGTAGTCACTTGTTGAAATCTCTA 58.022 36.000 0.00 0.00 29.74 2.43
3941 4168 5.844004 ACGTAGTCACTTGTTGAAATCTCT 58.156 37.500 0.00 0.00 29.74 3.10
3942 4169 7.201444 CCATACGTAGTCACTTGTTGAAATCTC 60.201 40.741 0.08 0.00 43.93 2.75
3943 4170 6.590292 CCATACGTAGTCACTTGTTGAAATCT 59.410 38.462 0.08 0.00 43.93 2.40
3944 4171 6.588756 TCCATACGTAGTCACTTGTTGAAATC 59.411 38.462 0.08 0.00 43.93 2.17
3945 4172 6.460781 TCCATACGTAGTCACTTGTTGAAAT 58.539 36.000 0.08 0.00 43.93 2.17
3946 4173 5.845103 TCCATACGTAGTCACTTGTTGAAA 58.155 37.500 0.08 0.00 43.93 2.69
3947 4174 5.456548 TCCATACGTAGTCACTTGTTGAA 57.543 39.130 0.08 0.00 43.93 2.69
3948 4175 4.617530 GCTCCATACGTAGTCACTTGTTGA 60.618 45.833 0.08 0.00 43.93 3.18
3949 4176 3.612860 GCTCCATACGTAGTCACTTGTTG 59.387 47.826 0.08 0.00 43.93 3.33
3950 4177 3.257375 TGCTCCATACGTAGTCACTTGTT 59.743 43.478 0.08 0.00 43.93 2.83
3951 4178 2.823747 TGCTCCATACGTAGTCACTTGT 59.176 45.455 0.08 0.00 43.93 3.16
3952 4179 3.503827 TGCTCCATACGTAGTCACTTG 57.496 47.619 0.08 0.00 43.93 3.16
3953 4180 4.530710 TTTGCTCCATACGTAGTCACTT 57.469 40.909 0.08 0.00 43.93 3.16
3954 4181 4.530710 TTTTGCTCCATACGTAGTCACT 57.469 40.909 0.08 0.00 43.93 3.41
3955 4182 4.868171 TCATTTTGCTCCATACGTAGTCAC 59.132 41.667 0.08 0.00 43.93 3.67
3956 4183 5.079689 TCATTTTGCTCCATACGTAGTCA 57.920 39.130 0.08 0.00 43.93 3.41
3957 4184 5.005779 CACTCATTTTGCTCCATACGTAGTC 59.994 44.000 0.08 0.00 43.93 2.59
3959 4186 5.109210 TCACTCATTTTGCTCCATACGTAG 58.891 41.667 0.08 0.00 0.00 3.51
3960 4187 5.079689 TCACTCATTTTGCTCCATACGTA 57.920 39.130 0.00 0.00 0.00 3.57
3961 4188 3.937814 TCACTCATTTTGCTCCATACGT 58.062 40.909 0.00 0.00 0.00 3.57
3962 4189 4.944962 TTCACTCATTTTGCTCCATACG 57.055 40.909 0.00 0.00 0.00 3.06
3963 4190 6.690194 AGATTCACTCATTTTGCTCCATAC 57.310 37.500 0.00 0.00 0.00 2.39
3964 4191 7.280876 GTGTAGATTCACTCATTTTGCTCCATA 59.719 37.037 0.00 0.00 35.68 2.74
3965 4192 6.094603 GTGTAGATTCACTCATTTTGCTCCAT 59.905 38.462 0.00 0.00 35.68 3.41
3966 4193 5.412594 GTGTAGATTCACTCATTTTGCTCCA 59.587 40.000 0.00 0.00 35.68 3.86
3967 4194 5.645497 AGTGTAGATTCACTCATTTTGCTCC 59.355 40.000 0.00 0.00 44.07 4.70
3968 4195 6.734104 AGTGTAGATTCACTCATTTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
3969 4196 9.890629 TTATAGTGTAGATTCACTCATTTTGCT 57.109 29.630 2.59 0.00 45.79 3.91
3997 4224 9.642343 ACCACATACGGATGTATATAGACATAT 57.358 33.333 14.23 5.08 44.82 1.78
3999 4226 7.956328 ACCACATACGGATGTATATAGACAT 57.044 36.000 14.23 12.70 44.82 3.06
4000 4227 8.105197 ACTACCACATACGGATGTATATAGACA 58.895 37.037 22.62 2.07 44.82 3.41
4001 4228 8.503458 ACTACCACATACGGATGTATATAGAC 57.497 38.462 22.62 0.00 44.82 2.59
4002 4229 9.170734 GAACTACCACATACGGATGTATATAGA 57.829 37.037 22.62 5.04 44.82 1.98
4003 4230 8.953313 TGAACTACCACATACGGATGTATATAG 58.047 37.037 14.23 16.35 44.82 1.31
4004 4231 8.866970 TGAACTACCACATACGGATGTATATA 57.133 34.615 14.23 5.36 44.82 0.86
4005 4232 7.770366 TGAACTACCACATACGGATGTATAT 57.230 36.000 14.23 4.37 44.82 0.86
4006 4233 7.770366 ATGAACTACCACATACGGATGTATA 57.230 36.000 14.23 8.27 44.82 1.47
4007 4234 6.665992 ATGAACTACCACATACGGATGTAT 57.334 37.500 14.23 7.46 44.82 2.29
4008 4235 6.474140 AATGAACTACCACATACGGATGTA 57.526 37.500 14.23 0.00 44.82 2.29
4010 4237 5.815222 TCAAATGAACTACCACATACGGATG 59.185 40.000 5.94 5.94 39.16 3.51
4011 4238 5.984725 TCAAATGAACTACCACATACGGAT 58.015 37.500 0.00 0.00 0.00 4.18
4012 4239 5.408880 TCAAATGAACTACCACATACGGA 57.591 39.130 0.00 0.00 0.00 4.69
4013 4240 6.489127 TTTCAAATGAACTACCACATACGG 57.511 37.500 0.00 0.00 33.13 4.02
4014 4241 7.974675 AGATTTCAAATGAACTACCACATACG 58.025 34.615 0.00 0.00 33.13 3.06
4015 4242 9.167311 AGAGATTTCAAATGAACTACCACATAC 57.833 33.333 0.00 0.00 33.13 2.39
4017 4244 9.739276 TTAGAGATTTCAAATGAACTACCACAT 57.261 29.630 0.00 0.00 33.13 3.21
4018 4245 9.567776 TTTAGAGATTTCAAATGAACTACCACA 57.432 29.630 0.00 0.00 33.13 4.17
4042 4269 9.908152 CTCCGTTCCTAAAATATTTGTCTTTTT 57.092 29.630 0.39 0.00 0.00 1.94
4043 4270 8.520351 CCTCCGTTCCTAAAATATTTGTCTTTT 58.480 33.333 0.39 0.00 0.00 2.27
4044 4271 7.122204 CCCTCCGTTCCTAAAATATTTGTCTTT 59.878 37.037 0.39 0.00 0.00 2.52
4045 4272 6.602009 CCCTCCGTTCCTAAAATATTTGTCTT 59.398 38.462 0.39 0.00 0.00 3.01
4046 4273 6.069847 TCCCTCCGTTCCTAAAATATTTGTCT 60.070 38.462 0.39 0.00 0.00 3.41
4047 4274 6.117488 TCCCTCCGTTCCTAAAATATTTGTC 58.883 40.000 0.39 0.00 0.00 3.18
4048 4275 6.069705 TCCCTCCGTTCCTAAAATATTTGT 57.930 37.500 0.39 0.00 0.00 2.83
4049 4276 6.120220 ACTCCCTCCGTTCCTAAAATATTTG 58.880 40.000 0.39 0.00 0.00 2.32
4050 4277 6.323210 ACTCCCTCCGTTCCTAAAATATTT 57.677 37.500 0.00 0.00 0.00 1.40
4051 4278 5.970501 ACTCCCTCCGTTCCTAAAATATT 57.029 39.130 0.00 0.00 0.00 1.28
4052 4279 7.441903 TTTACTCCCTCCGTTCCTAAAATAT 57.558 36.000 0.00 0.00 0.00 1.28
4053 4280 6.872585 TTTACTCCCTCCGTTCCTAAAATA 57.127 37.500 0.00 0.00 0.00 1.40
4054 4281 5.767277 TTTACTCCCTCCGTTCCTAAAAT 57.233 39.130 0.00 0.00 0.00 1.82
4055 4282 5.767277 ATTTACTCCCTCCGTTCCTAAAA 57.233 39.130 0.00 0.00 0.00 1.52
4056 4283 5.767277 AATTTACTCCCTCCGTTCCTAAA 57.233 39.130 0.00 0.00 0.00 1.85
4057 4284 5.960202 AGTAATTTACTCCCTCCGTTCCTAA 59.040 40.000 3.16 0.00 32.47 2.69
4058 4285 5.361857 CAGTAATTTACTCCCTCCGTTCCTA 59.638 44.000 6.10 0.00 36.76 2.94
4059 4286 4.161754 CAGTAATTTACTCCCTCCGTTCCT 59.838 45.833 6.10 0.00 36.76 3.36
4060 4287 4.161001 TCAGTAATTTACTCCCTCCGTTCC 59.839 45.833 6.10 0.00 36.76 3.62
4061 4288 5.334724 TCAGTAATTTACTCCCTCCGTTC 57.665 43.478 6.10 0.00 36.76 3.95
4062 4289 5.671493 CATCAGTAATTTACTCCCTCCGTT 58.329 41.667 6.10 0.00 36.76 4.44
4063 4290 4.443034 GCATCAGTAATTTACTCCCTCCGT 60.443 45.833 6.10 0.00 36.76 4.69
4064 4291 4.058817 GCATCAGTAATTTACTCCCTCCG 58.941 47.826 6.10 0.00 36.76 4.63
4065 4292 5.036117 TGCATCAGTAATTTACTCCCTCC 57.964 43.478 6.10 0.00 36.76 4.30
4066 4293 7.445945 ACTATGCATCAGTAATTTACTCCCTC 58.554 38.462 0.19 0.00 36.76 4.30
4067 4294 7.380423 ACTATGCATCAGTAATTTACTCCCT 57.620 36.000 0.19 0.00 36.76 4.20
4068 4295 9.726438 AATACTATGCATCAGTAATTTACTCCC 57.274 33.333 0.19 0.00 36.76 4.30
4107 4334 7.533426 GCCACAATTCATCTAATGATCATACC 58.467 38.462 9.04 0.00 39.39 2.73
4206 4433 6.600822 ACACCTAGCATATGCCATCATAATTC 59.399 38.462 23.96 0.00 43.38 2.17
4228 4455 5.408604 CCTCTTGTACATTCAGGTTACACAC 59.591 44.000 0.00 0.00 0.00 3.82
4236 4463 4.271696 TGTGTCCTCTTGTACATTCAGG 57.728 45.455 0.00 2.58 0.00 3.86
4254 4481 1.259609 ACAGCCCACCAATCATTGTG 58.740 50.000 0.00 0.00 0.00 3.33
4256 4483 1.619827 ACAACAGCCCACCAATCATTG 59.380 47.619 0.00 0.00 0.00 2.82
4300 4543 9.363763 TGCATCTTTGATTCGCAAAATAAAATA 57.636 25.926 0.00 0.00 45.26 1.40
4301 4544 8.254178 TGCATCTTTGATTCGCAAAATAAAAT 57.746 26.923 0.00 0.00 45.26 1.82
4306 4549 6.730960 AAATGCATCTTTGATTCGCAAAAT 57.269 29.167 0.00 0.00 45.26 1.82
4405 4867 6.620678 GCTAGAAAATGTGAAAACATGGCTA 58.379 36.000 0.00 0.00 0.00 3.93
4413 4875 3.818210 TGCTCCGCTAGAAAATGTGAAAA 59.182 39.130 0.00 0.00 0.00 2.29
4414 4876 3.407698 TGCTCCGCTAGAAAATGTGAAA 58.592 40.909 0.00 0.00 0.00 2.69
4415 4877 3.052455 TGCTCCGCTAGAAAATGTGAA 57.948 42.857 0.00 0.00 0.00 3.18
4416 4878 2.760634 TGCTCCGCTAGAAAATGTGA 57.239 45.000 0.00 0.00 0.00 3.58
4417 4879 2.679837 ACATGCTCCGCTAGAAAATGTG 59.320 45.455 0.00 0.00 29.31 3.21
4418 4880 2.991250 ACATGCTCCGCTAGAAAATGT 58.009 42.857 0.00 0.00 0.00 2.71
4419 4881 4.512944 ACATACATGCTCCGCTAGAAAATG 59.487 41.667 0.00 0.00 0.00 2.32
4420 4882 4.708177 ACATACATGCTCCGCTAGAAAAT 58.292 39.130 0.00 0.00 0.00 1.82
4421 4883 4.137116 ACATACATGCTCCGCTAGAAAA 57.863 40.909 0.00 0.00 0.00 2.29
4422 4884 3.819564 ACATACATGCTCCGCTAGAAA 57.180 42.857 0.00 0.00 0.00 2.52
4423 4885 3.634910 TGTACATACATGCTCCGCTAGAA 59.365 43.478 0.00 0.00 0.00 2.10
4424 4886 3.219281 TGTACATACATGCTCCGCTAGA 58.781 45.455 0.00 0.00 0.00 2.43
4425 4887 3.569548 CTGTACATACATGCTCCGCTAG 58.430 50.000 0.00 0.00 35.36 3.42
4426 4888 2.296190 CCTGTACATACATGCTCCGCTA 59.704 50.000 0.00 0.00 35.36 4.26
4427 4889 1.069204 CCTGTACATACATGCTCCGCT 59.931 52.381 0.00 0.00 35.36 5.52
4428 4890 1.202533 ACCTGTACATACATGCTCCGC 60.203 52.381 0.00 0.00 35.36 5.54
4429 4891 2.890808 ACCTGTACATACATGCTCCG 57.109 50.000 0.00 0.00 35.36 4.63
4430 4892 5.057149 CCTTTACCTGTACATACATGCTCC 58.943 45.833 0.00 0.00 35.36 4.70
4431 4893 5.914033 TCCTTTACCTGTACATACATGCTC 58.086 41.667 0.00 0.00 35.36 4.26
4432 4894 5.950544 TCCTTTACCTGTACATACATGCT 57.049 39.130 0.00 0.00 35.36 3.79
4433 4895 5.701290 GGATCCTTTACCTGTACATACATGC 59.299 44.000 3.84 0.00 35.36 4.06
4434 4896 6.706270 GTGGATCCTTTACCTGTACATACATG 59.294 42.308 14.23 0.00 35.36 3.21
4435 4897 6.183361 GGTGGATCCTTTACCTGTACATACAT 60.183 42.308 14.23 0.00 35.36 2.29
4436 4898 5.129815 GGTGGATCCTTTACCTGTACATACA 59.870 44.000 14.23 0.00 34.56 2.29
4437 4899 5.608449 GGTGGATCCTTTACCTGTACATAC 58.392 45.833 14.23 0.00 0.00 2.39
4438 4900 4.342951 CGGTGGATCCTTTACCTGTACATA 59.657 45.833 14.23 0.00 32.28 2.29
4439 4901 3.134081 CGGTGGATCCTTTACCTGTACAT 59.866 47.826 14.23 0.00 32.28 2.29
4440 4902 2.498481 CGGTGGATCCTTTACCTGTACA 59.502 50.000 14.23 0.00 32.28 2.90
4441 4903 2.498885 ACGGTGGATCCTTTACCTGTAC 59.501 50.000 14.23 0.00 32.28 2.90
4442 4904 2.823959 ACGGTGGATCCTTTACCTGTA 58.176 47.619 14.23 0.00 32.28 2.74
4443 4905 1.652947 ACGGTGGATCCTTTACCTGT 58.347 50.000 14.23 11.40 32.28 4.00
4444 4906 2.629051 GAACGGTGGATCCTTTACCTG 58.371 52.381 14.23 10.82 32.28 4.00
4445 4907 1.206371 CGAACGGTGGATCCTTTACCT 59.794 52.381 14.23 0.00 32.28 3.08
4446 4908 1.648504 CGAACGGTGGATCCTTTACC 58.351 55.000 14.23 11.45 0.00 2.85
4447 4909 1.004595 GCGAACGGTGGATCCTTTAC 58.995 55.000 14.23 2.38 0.00 2.01
4448 4910 0.609151 TGCGAACGGTGGATCCTTTA 59.391 50.000 14.23 0.00 0.00 1.85
4449 4911 0.250553 TTGCGAACGGTGGATCCTTT 60.251 50.000 14.23 0.62 0.00 3.11
4450 4912 1.373435 TTGCGAACGGTGGATCCTT 59.627 52.632 14.23 0.00 0.00 3.36
4451 4913 3.065306 TTGCGAACGGTGGATCCT 58.935 55.556 14.23 0.00 0.00 3.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.