Multiple sequence alignment - TraesCS3B01G505000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G505000 chr3B 100.000 2431 0 0 1 2431 749194476 749192046 0.000000e+00 4490
1 TraesCS3B01G505000 chr3B 96.671 1412 45 2 1 1410 684606732 684608143 0.000000e+00 2346
2 TraesCS3B01G505000 chr2B 96.955 1412 41 2 1 1410 725389643 725391054 0.000000e+00 2368
3 TraesCS3B01G505000 chr2B 96.034 1412 54 2 1 1410 81562999 81564410 0.000000e+00 2296
4 TraesCS3B01G505000 chr5B 96.601 1412 46 2 1 1410 581254281 581252870 0.000000e+00 2340
5 TraesCS3B01G505000 chr5B 96.215 502 18 1 370 870 489396665 489396164 0.000000e+00 821
6 TraesCS3B01G505000 chr5B 98.069 466 9 0 1966 2431 400721962 400721497 0.000000e+00 811
7 TraesCS3B01G505000 chr7B 96.388 1412 49 2 1 1410 689143520 689142109 0.000000e+00 2324
8 TraesCS3B01G505000 chr7B 95.479 1106 42 2 868 1966 515591427 515592531 0.000000e+00 1759
9 TraesCS3B01G505000 chr7B 93.761 1106 61 2 868 1966 575977221 575976117 0.000000e+00 1653
10 TraesCS3B01G505000 chr7B 96.330 872 30 2 1 870 63964815 63963944 0.000000e+00 1432
11 TraesCS3B01G505000 chr6B 96.388 1412 49 2 1 1410 58114127 58115538 0.000000e+00 2324
12 TraesCS3B01G505000 chr6B 95.389 1106 44 1 868 1966 671454262 671455367 0.000000e+00 1753
13 TraesCS3B01G505000 chr6B 98.073 467 9 0 1965 2431 519640037 519639571 0.000000e+00 813
14 TraesCS3B01G505000 chr6B 96.687 483 13 2 1952 2431 51621171 51621653 0.000000e+00 800
15 TraesCS3B01G505000 chr3A 95.298 1106 45 5 868 1966 629106020 629107125 0.000000e+00 1748
16 TraesCS3B01G505000 chr3A 98.069 466 9 0 1966 2431 634644875 634645340 0.000000e+00 811
17 TraesCS3B01G505000 chr2D 94.937 1106 46 5 868 1966 645429017 645430119 0.000000e+00 1724
18 TraesCS3B01G505000 chr1B 95.543 875 32 1 1099 1966 665424813 665423939 0.000000e+00 1393
19 TraesCS3B01G505000 chr1B 90.429 700 48 2 1286 1966 232329633 232330332 0.000000e+00 904
20 TraesCS3B01G505000 chr1B 96.000 500 19 1 370 868 152576757 152576258 0.000000e+00 811
21 TraesCS3B01G505000 chr7D 95.441 680 24 1 1294 1966 41752456 41751777 0.000000e+00 1077
22 TraesCS3B01G505000 chr7D 89.206 491 40 3 1462 1945 486202432 486201948 3.460000e-168 601
23 TraesCS3B01G505000 chr4B 98.495 465 7 0 1967 2431 120677318 120677782 0.000000e+00 821
24 TraesCS3B01G505000 chr4B 98.495 465 7 0 1967 2431 120681910 120682374 0.000000e+00 821
25 TraesCS3B01G505000 chr1A 97.484 477 12 0 1955 2431 136475360 136474884 0.000000e+00 815
26 TraesCS3B01G505000 chr1A 98.065 465 9 0 1967 2431 390362455 390361991 0.000000e+00 809
27 TraesCS3B01G505000 chr1A 98.065 465 9 0 1967 2431 574587932 574588396 0.000000e+00 809
28 TraesCS3B01G505000 chr1A 88.000 325 27 6 11 323 331637534 331637210 8.210000e-100 374
29 TraesCS3B01G505000 chr4A 87.410 278 20 6 11 277 609922721 609922448 3.040000e-79 305


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G505000 chr3B 749192046 749194476 2430 True 4490 4490 100.000 1 2431 1 chr3B.!!$R1 2430
1 TraesCS3B01G505000 chr3B 684606732 684608143 1411 False 2346 2346 96.671 1 1410 1 chr3B.!!$F1 1409
2 TraesCS3B01G505000 chr2B 725389643 725391054 1411 False 2368 2368 96.955 1 1410 1 chr2B.!!$F2 1409
3 TraesCS3B01G505000 chr2B 81562999 81564410 1411 False 2296 2296 96.034 1 1410 1 chr2B.!!$F1 1409
4 TraesCS3B01G505000 chr5B 581252870 581254281 1411 True 2340 2340 96.601 1 1410 1 chr5B.!!$R3 1409
5 TraesCS3B01G505000 chr5B 489396164 489396665 501 True 821 821 96.215 370 870 1 chr5B.!!$R2 500
6 TraesCS3B01G505000 chr7B 689142109 689143520 1411 True 2324 2324 96.388 1 1410 1 chr7B.!!$R3 1409
7 TraesCS3B01G505000 chr7B 515591427 515592531 1104 False 1759 1759 95.479 868 1966 1 chr7B.!!$F1 1098
8 TraesCS3B01G505000 chr7B 575976117 575977221 1104 True 1653 1653 93.761 868 1966 1 chr7B.!!$R2 1098
9 TraesCS3B01G505000 chr7B 63963944 63964815 871 True 1432 1432 96.330 1 870 1 chr7B.!!$R1 869
10 TraesCS3B01G505000 chr6B 58114127 58115538 1411 False 2324 2324 96.388 1 1410 1 chr6B.!!$F2 1409
11 TraesCS3B01G505000 chr6B 671454262 671455367 1105 False 1753 1753 95.389 868 1966 1 chr6B.!!$F3 1098
12 TraesCS3B01G505000 chr3A 629106020 629107125 1105 False 1748 1748 95.298 868 1966 1 chr3A.!!$F1 1098
13 TraesCS3B01G505000 chr2D 645429017 645430119 1102 False 1724 1724 94.937 868 1966 1 chr2D.!!$F1 1098
14 TraesCS3B01G505000 chr1B 665423939 665424813 874 True 1393 1393 95.543 1099 1966 1 chr1B.!!$R2 867
15 TraesCS3B01G505000 chr1B 232329633 232330332 699 False 904 904 90.429 1286 1966 1 chr1B.!!$F1 680
16 TraesCS3B01G505000 chr7D 41751777 41752456 679 True 1077 1077 95.441 1294 1966 1 chr7D.!!$R1 672

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
709 712 1.153939 CAGACTGACCTCCGCTTCG 60.154 63.158 0.0 0.0 0.0 3.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2193 2216 0.036388 GTTCGAAGCTGGGTCATGGA 60.036 55.0 0.0 0.0 0.0 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
105 107 8.853077 TCTATCACTCACAGAATTGATGTTTT 57.147 30.769 0.00 0.00 31.20 2.43
188 190 1.909302 AGCCTGGTAAGCTAGCTTCAA 59.091 47.619 32.51 14.62 39.29 2.69
442 444 5.167845 GTTCTTCTGATGGTTCTCACTCTC 58.832 45.833 0.00 0.00 0.00 3.20
524 526 8.794335 AGATACTCCTTAAACTTTGGATCAAC 57.206 34.615 0.00 0.00 0.00 3.18
529 531 9.588096 ACTCCTTAAACTTTGGATCAACTAAAT 57.412 29.630 0.00 0.00 0.00 1.40
709 712 1.153939 CAGACTGACCTCCGCTTCG 60.154 63.158 0.00 0.00 0.00 3.79
802 805 3.908081 GCGCCATCCATGCCAAGG 61.908 66.667 0.00 0.00 0.00 3.61
873 876 2.158957 CGAGAGGGCTTAAGGTGCAATA 60.159 50.000 4.29 0.00 0.00 1.90
933 936 7.364232 CCTTGATTCTGTAGGATTAGTGTGTCT 60.364 40.741 0.00 0.00 0.00 3.41
1329 1333 1.532868 CCAAGACCAAGAAGCAGAACG 59.467 52.381 0.00 0.00 0.00 3.95
1456 1460 3.381590 GCCCTTATGCTTGGTTTCTAAGG 59.618 47.826 0.00 0.00 38.66 2.69
1508 1519 0.524862 CTCCTTGAGTTGTGGCATGC 59.475 55.000 9.90 9.90 0.00 4.06
1590 1613 4.823442 TGTCTTGACTGAATGCATCTTGTT 59.177 37.500 0.00 0.00 0.00 2.83
1623 1646 6.481644 CCTAAGTTCAAGGATGTATTCTCTGC 59.518 42.308 0.00 0.00 36.08 4.26
1674 1697 7.232534 AGTTATTATGCTTCCCAGTTTGTTGAA 59.767 33.333 0.00 0.00 0.00 2.69
1678 1701 2.952310 GCTTCCCAGTTTGTTGAAGAGT 59.048 45.455 0.00 0.00 37.07 3.24
1801 1824 5.418209 AGTTGTCCAGTACTCATAGGTGTAC 59.582 44.000 10.85 10.85 41.84 2.90
1854 1877 9.965824 CTAATTGTAGTTCAACAATGTTTTCCT 57.034 29.630 0.00 0.00 46.72 3.36
1897 1920 7.915293 TGTTTTGAGAAGTCACTTTGTTCTA 57.085 32.000 0.00 0.00 30.55 2.10
1906 1929 3.493503 GTCACTTTGTTCTACAAGTCGGG 59.506 47.826 0.00 0.00 39.53 5.14
1966 1989 6.881602 TGTTCCCTTAATTTTGCAAAGTTTGT 59.118 30.769 22.76 4.14 0.00 2.83
1967 1990 6.917217 TCCCTTAATTTTGCAAAGTTTGTG 57.083 33.333 22.76 13.58 0.00 3.33
1968 1991 6.410540 TCCCTTAATTTTGCAAAGTTTGTGT 58.589 32.000 22.76 3.44 0.00 3.72
1969 1992 6.536941 TCCCTTAATTTTGCAAAGTTTGTGTC 59.463 34.615 22.76 1.45 0.00 3.67
1970 1993 6.314896 CCCTTAATTTTGCAAAGTTTGTGTCA 59.685 34.615 22.76 3.55 0.00 3.58
1971 1994 7.401080 CCTTAATTTTGCAAAGTTTGTGTCAG 58.599 34.615 22.76 10.66 0.00 3.51
1972 1995 5.799681 AATTTTGCAAAGTTTGTGTCAGG 57.200 34.783 13.60 0.00 0.00 3.86
1973 1996 4.527509 TTTTGCAAAGTTTGTGTCAGGA 57.472 36.364 16.70 0.00 0.00 3.86
1974 1997 3.502191 TTGCAAAGTTTGTGTCAGGAC 57.498 42.857 16.70 0.00 0.00 3.85
1975 1998 1.748493 TGCAAAGTTTGTGTCAGGACC 59.252 47.619 16.70 0.00 0.00 4.46
1976 1999 1.067060 GCAAAGTTTGTGTCAGGACCC 59.933 52.381 16.70 0.00 0.00 4.46
1977 2000 1.681264 CAAAGTTTGTGTCAGGACCCC 59.319 52.381 7.48 0.00 0.00 4.95
1978 2001 0.179029 AAGTTTGTGTCAGGACCCCG 60.179 55.000 0.00 0.00 0.00 5.73
1979 2002 1.052124 AGTTTGTGTCAGGACCCCGA 61.052 55.000 0.00 0.00 0.00 5.14
1980 2003 0.883370 GTTTGTGTCAGGACCCCGAC 60.883 60.000 4.95 4.95 0.00 4.79
1981 2004 1.052124 TTTGTGTCAGGACCCCGACT 61.052 55.000 11.80 0.00 31.80 4.18
1982 2005 1.469335 TTGTGTCAGGACCCCGACTC 61.469 60.000 11.80 9.18 31.80 3.36
1983 2006 2.675423 TGTCAGGACCCCGACTCG 60.675 66.667 11.80 0.00 31.80 4.18
1984 2007 2.360852 GTCAGGACCCCGACTCGA 60.361 66.667 0.00 0.00 0.00 4.04
1985 2008 1.753463 GTCAGGACCCCGACTCGAT 60.753 63.158 0.00 0.00 0.00 3.59
1986 2009 1.753078 TCAGGACCCCGACTCGATG 60.753 63.158 0.00 0.00 0.00 3.84
1987 2010 2.052690 CAGGACCCCGACTCGATGT 61.053 63.158 0.00 0.00 0.00 3.06
1988 2011 1.753463 AGGACCCCGACTCGATGTC 60.753 63.158 0.00 5.96 42.06 3.06
1989 2012 2.050350 GGACCCCGACTCGATGTCA 61.050 63.158 16.91 0.00 45.60 3.58
1990 2013 1.139095 GACCCCGACTCGATGTCAC 59.861 63.158 13.14 0.00 45.60 3.67
1991 2014 1.592400 GACCCCGACTCGATGTCACA 61.592 60.000 13.14 0.00 45.60 3.58
1992 2015 0.970937 ACCCCGACTCGATGTCACAT 60.971 55.000 13.14 0.00 45.60 3.21
1993 2016 0.249073 CCCCGACTCGATGTCACATC 60.249 60.000 7.83 7.83 45.60 3.06
1994 2017 0.592500 CCCGACTCGATGTCACATCG 60.593 60.000 30.60 30.60 45.60 3.84
1995 2018 0.377203 CCGACTCGATGTCACATCGA 59.623 55.000 34.63 34.63 46.69 3.59
2001 2024 3.544356 TCGATGTCACATCGATCTAGC 57.456 47.619 33.92 0.00 44.42 3.42
2002 2025 2.226674 TCGATGTCACATCGATCTAGCC 59.773 50.000 33.92 0.00 44.42 3.93
2003 2026 2.590073 GATGTCACATCGATCTAGCCG 58.410 52.381 0.93 0.00 0.00 5.52
2004 2027 0.668535 TGTCACATCGATCTAGCCGG 59.331 55.000 0.00 0.00 0.00 6.13
2005 2028 0.669077 GTCACATCGATCTAGCCGGT 59.331 55.000 1.90 0.00 0.00 5.28
2006 2029 1.878088 GTCACATCGATCTAGCCGGTA 59.122 52.381 1.90 0.00 0.00 4.02
2007 2030 2.292569 GTCACATCGATCTAGCCGGTAA 59.707 50.000 1.90 0.00 0.00 2.85
2008 2031 2.292569 TCACATCGATCTAGCCGGTAAC 59.707 50.000 1.90 0.00 0.00 2.50
2009 2032 2.034179 CACATCGATCTAGCCGGTAACA 59.966 50.000 1.90 0.00 0.00 2.41
2010 2033 2.034305 ACATCGATCTAGCCGGTAACAC 59.966 50.000 1.90 0.00 0.00 3.32
2011 2034 1.027357 TCGATCTAGCCGGTAACACC 58.973 55.000 1.90 0.00 34.05 4.16
2012 2035 1.030457 CGATCTAGCCGGTAACACCT 58.970 55.000 1.90 0.00 35.66 4.00
2013 2036 1.001597 CGATCTAGCCGGTAACACCTC 60.002 57.143 1.90 0.00 35.66 3.85
2014 2037 2.029623 GATCTAGCCGGTAACACCTCA 58.970 52.381 1.90 0.00 35.66 3.86
2015 2038 2.154567 TCTAGCCGGTAACACCTCAT 57.845 50.000 1.90 0.00 35.66 2.90
2016 2039 3.301794 TCTAGCCGGTAACACCTCATA 57.698 47.619 1.90 0.00 35.66 2.15
2017 2040 3.840991 TCTAGCCGGTAACACCTCATAT 58.159 45.455 1.90 0.00 35.66 1.78
2018 2041 3.825014 TCTAGCCGGTAACACCTCATATC 59.175 47.826 1.90 0.00 35.66 1.63
2019 2042 2.394632 AGCCGGTAACACCTCATATCA 58.605 47.619 1.90 0.00 35.66 2.15
2020 2043 2.102588 AGCCGGTAACACCTCATATCAC 59.897 50.000 1.90 0.00 35.66 3.06
2021 2044 2.102588 GCCGGTAACACCTCATATCACT 59.897 50.000 1.90 0.00 35.66 3.41
2022 2045 3.431766 GCCGGTAACACCTCATATCACTT 60.432 47.826 1.90 0.00 35.66 3.16
2023 2046 4.766375 CCGGTAACACCTCATATCACTTT 58.234 43.478 0.00 0.00 35.66 2.66
2024 2047 4.570772 CCGGTAACACCTCATATCACTTTG 59.429 45.833 0.00 0.00 35.66 2.77
2025 2048 4.034048 CGGTAACACCTCATATCACTTTGC 59.966 45.833 0.00 0.00 35.66 3.68
2026 2049 4.034048 GGTAACACCTCATATCACTTTGCG 59.966 45.833 0.00 0.00 34.73 4.85
2027 2050 2.632377 ACACCTCATATCACTTTGCGG 58.368 47.619 0.00 0.00 0.00 5.69
2028 2051 1.331756 CACCTCATATCACTTTGCGGC 59.668 52.381 0.00 0.00 0.00 6.53
2029 2052 0.947244 CCTCATATCACTTTGCGGCC 59.053 55.000 0.00 0.00 0.00 6.13
2030 2053 1.475751 CCTCATATCACTTTGCGGCCT 60.476 52.381 0.00 0.00 0.00 5.19
2031 2054 1.869767 CTCATATCACTTTGCGGCCTC 59.130 52.381 0.00 0.00 0.00 4.70
2032 2055 1.209261 TCATATCACTTTGCGGCCTCA 59.791 47.619 0.00 0.00 0.00 3.86
2033 2056 1.331756 CATATCACTTTGCGGCCTCAC 59.668 52.381 0.00 0.00 0.00 3.51
2034 2057 0.739462 TATCACTTTGCGGCCTCACG 60.739 55.000 0.00 0.00 0.00 4.35
2042 2065 4.508128 CGGCCTCACGCACGGTAT 62.508 66.667 0.00 0.00 40.31 2.73
2043 2066 2.585247 GGCCTCACGCACGGTATC 60.585 66.667 0.00 0.00 40.31 2.24
2044 2067 2.585247 GCCTCACGCACGGTATCC 60.585 66.667 0.00 0.00 37.47 2.59
2045 2068 2.106332 CCTCACGCACGGTATCCC 59.894 66.667 0.00 0.00 0.00 3.85
2046 2069 2.106332 CTCACGCACGGTATCCCC 59.894 66.667 0.00 0.00 0.00 4.81
2047 2070 2.680707 TCACGCACGGTATCCCCA 60.681 61.111 0.00 0.00 0.00 4.96
2048 2071 2.510691 CACGCACGGTATCCCCAC 60.511 66.667 0.00 0.00 0.00 4.61
2049 2072 4.137872 ACGCACGGTATCCCCACG 62.138 66.667 0.00 0.00 0.00 4.94
2050 2073 4.884257 CGCACGGTATCCCCACGG 62.884 72.222 0.00 0.00 0.00 4.94
2051 2074 4.540735 GCACGGTATCCCCACGGG 62.541 72.222 0.00 0.00 46.11 5.28
2052 2075 3.078836 CACGGTATCCCCACGGGT 61.079 66.667 0.41 0.00 44.74 5.28
2053 2076 3.078836 ACGGTATCCCCACGGGTG 61.079 66.667 0.41 0.00 44.74 4.61
2054 2077 3.078836 CGGTATCCCCACGGGTGT 61.079 66.667 0.41 0.00 44.74 4.16
2055 2078 2.905681 GGTATCCCCACGGGTGTC 59.094 66.667 0.41 0.00 44.74 3.67
2056 2079 2.497770 GTATCCCCACGGGTGTCG 59.502 66.667 0.41 0.00 44.74 4.35
2066 2089 3.900446 CGGGTGTCGTCTTACCTTT 57.100 52.632 0.00 0.00 37.15 3.11
2067 2090 2.159327 CGGGTGTCGTCTTACCTTTT 57.841 50.000 0.00 0.00 37.15 2.27
2068 2091 2.064014 CGGGTGTCGTCTTACCTTTTC 58.936 52.381 0.00 0.00 37.15 2.29
2069 2092 2.420642 GGGTGTCGTCTTACCTTTTCC 58.579 52.381 0.00 0.00 37.15 3.13
2070 2093 2.420642 GGTGTCGTCTTACCTTTTCCC 58.579 52.381 0.00 0.00 34.11 3.97
2071 2094 2.064014 GTGTCGTCTTACCTTTTCCCG 58.936 52.381 0.00 0.00 0.00 5.14
2072 2095 1.001181 TGTCGTCTTACCTTTTCCCGG 59.999 52.381 0.00 0.00 0.00 5.73
2073 2096 0.609662 TCGTCTTACCTTTTCCCGGG 59.390 55.000 16.85 16.85 0.00 5.73
2074 2097 0.609662 CGTCTTACCTTTTCCCGGGA 59.390 55.000 22.63 22.63 0.00 5.14
2075 2098 1.673923 CGTCTTACCTTTTCCCGGGAC 60.674 57.143 26.87 7.18 0.00 4.46
2076 2099 0.986527 TCTTACCTTTTCCCGGGACC 59.013 55.000 26.87 0.00 0.00 4.46
2077 2100 0.392060 CTTACCTTTTCCCGGGACCG 60.392 60.000 26.87 14.42 39.44 4.79
2078 2101 1.126948 TTACCTTTTCCCGGGACCGT 61.127 55.000 26.87 18.60 37.81 4.83
2079 2102 1.126948 TACCTTTTCCCGGGACCGTT 61.127 55.000 26.87 9.48 37.81 4.44
2080 2103 1.228337 CCTTTTCCCGGGACCGTTT 60.228 57.895 26.87 0.00 37.81 3.60
2081 2104 1.520600 CCTTTTCCCGGGACCGTTTG 61.521 60.000 26.87 10.30 37.81 2.93
2082 2105 2.137425 CTTTTCCCGGGACCGTTTGC 62.137 60.000 26.87 0.00 37.81 3.68
2083 2106 4.992511 TTCCCGGGACCGTTTGCG 62.993 66.667 26.87 0.00 37.81 4.85
2088 2111 3.292159 GGGACCGTTTGCGCCTTT 61.292 61.111 4.18 0.00 36.67 3.11
2089 2112 2.254350 GGACCGTTTGCGCCTTTC 59.746 61.111 4.18 0.00 36.67 2.62
2090 2113 2.127383 GACCGTTTGCGCCTTTCG 60.127 61.111 4.18 4.59 42.12 3.46
2091 2114 3.588891 GACCGTTTGCGCCTTTCGG 62.589 63.158 21.96 21.96 45.53 4.30
2104 2127 3.364889 CCTTTCGGCTCACGTATATGA 57.635 47.619 0.00 0.00 44.69 2.15
2105 2128 3.914312 CCTTTCGGCTCACGTATATGAT 58.086 45.455 0.00 0.00 44.69 2.45
2106 2129 3.675225 CCTTTCGGCTCACGTATATGATG 59.325 47.826 0.00 0.00 44.69 3.07
2107 2130 3.297830 TTCGGCTCACGTATATGATGG 57.702 47.619 0.00 0.00 44.69 3.51
2108 2131 2.235891 TCGGCTCACGTATATGATGGT 58.764 47.619 0.00 0.00 44.69 3.55
2109 2132 2.030274 TCGGCTCACGTATATGATGGTG 60.030 50.000 0.00 0.00 44.69 4.17
2110 2133 2.288213 CGGCTCACGTATATGATGGTGT 60.288 50.000 0.00 0.00 37.93 4.16
2111 2134 3.318017 GGCTCACGTATATGATGGTGTC 58.682 50.000 0.00 0.00 0.00 3.67
2112 2135 2.980476 GCTCACGTATATGATGGTGTCG 59.020 50.000 0.00 0.00 0.00 4.35
2113 2136 2.980476 CTCACGTATATGATGGTGTCGC 59.020 50.000 0.00 0.00 0.00 5.19
2114 2137 2.621526 TCACGTATATGATGGTGTCGCT 59.378 45.455 0.00 0.00 0.00 4.93
2115 2138 3.816523 TCACGTATATGATGGTGTCGCTA 59.183 43.478 0.00 0.00 0.00 4.26
2116 2139 4.083484 TCACGTATATGATGGTGTCGCTAG 60.083 45.833 0.00 0.00 0.00 3.42
2117 2140 3.172050 CGTATATGATGGTGTCGCTAGC 58.828 50.000 4.06 4.06 0.00 3.42
2118 2141 3.365969 CGTATATGATGGTGTCGCTAGCA 60.366 47.826 16.45 0.00 0.00 3.49
2119 2142 3.969287 ATATGATGGTGTCGCTAGCAT 57.031 42.857 16.45 5.79 41.12 3.79
2121 2144 2.906047 GATGGTGTCGCTAGCATCC 58.094 57.895 16.45 11.01 45.26 3.51
2122 2145 0.104855 GATGGTGTCGCTAGCATCCA 59.895 55.000 16.45 16.05 45.26 3.41
2123 2146 0.761187 ATGGTGTCGCTAGCATCCAT 59.239 50.000 16.45 17.46 33.85 3.41
2124 2147 1.408969 TGGTGTCGCTAGCATCCATA 58.591 50.000 16.45 0.00 0.00 2.74
2125 2148 1.970640 TGGTGTCGCTAGCATCCATAT 59.029 47.619 16.45 0.00 0.00 1.78
2126 2149 2.289010 TGGTGTCGCTAGCATCCATATG 60.289 50.000 16.45 0.00 36.09 1.78
2127 2150 2.029020 GGTGTCGCTAGCATCCATATGA 60.029 50.000 16.45 0.00 34.84 2.15
2128 2151 2.989840 GTGTCGCTAGCATCCATATGAC 59.010 50.000 16.45 11.40 34.84 3.06
2129 2152 2.627699 TGTCGCTAGCATCCATATGACA 59.372 45.455 16.45 13.85 34.84 3.58
2130 2153 3.069443 TGTCGCTAGCATCCATATGACAA 59.931 43.478 16.45 0.36 34.84 3.18
2131 2154 3.677121 GTCGCTAGCATCCATATGACAAG 59.323 47.826 16.45 0.00 34.84 3.16
2132 2155 2.998670 CGCTAGCATCCATATGACAAGG 59.001 50.000 16.45 0.00 34.84 3.61
2133 2156 3.306294 CGCTAGCATCCATATGACAAGGA 60.306 47.826 16.45 0.00 34.84 3.36
2134 2157 4.252073 GCTAGCATCCATATGACAAGGAG 58.748 47.826 10.63 0.00 34.84 3.69
2135 2158 3.137446 AGCATCCATATGACAAGGAGC 57.863 47.619 3.65 0.00 34.84 4.70
2136 2159 2.157738 GCATCCATATGACAAGGAGCC 58.842 52.381 3.65 0.00 34.84 4.70
2137 2160 2.787994 CATCCATATGACAAGGAGCCC 58.212 52.381 3.65 0.00 34.84 5.19
2138 2161 0.758734 TCCATATGACAAGGAGCCCG 59.241 55.000 3.65 0.00 0.00 6.13
2139 2162 0.250467 CCATATGACAAGGAGCCCGG 60.250 60.000 3.65 0.00 0.00 5.73
2140 2163 0.250467 CATATGACAAGGAGCCCGGG 60.250 60.000 19.09 19.09 0.00 5.73
2141 2164 2.056906 ATATGACAAGGAGCCCGGGC 62.057 60.000 39.29 39.29 42.33 6.13
2151 2174 4.101448 GCCCGGGCTGACATGACT 62.101 66.667 38.76 0.00 38.26 3.41
2152 2175 2.731571 GCCCGGGCTGACATGACTA 61.732 63.158 38.76 0.00 38.26 2.59
2153 2176 1.443407 CCCGGGCTGACATGACTAG 59.557 63.158 8.08 0.00 0.00 2.57
2154 2177 1.330655 CCCGGGCTGACATGACTAGT 61.331 60.000 8.08 0.00 0.00 2.57
2155 2178 0.103208 CCGGGCTGACATGACTAGTC 59.897 60.000 16.32 16.32 36.55 2.59
2156 2179 0.248661 CGGGCTGACATGACTAGTCG 60.249 60.000 17.85 7.27 38.83 4.18
2157 2180 0.818296 GGGCTGACATGACTAGTCGT 59.182 55.000 17.85 15.05 38.83 4.34
2158 2181 2.022195 GGGCTGACATGACTAGTCGTA 58.978 52.381 17.18 1.00 38.83 3.43
2159 2182 2.426024 GGGCTGACATGACTAGTCGTAA 59.574 50.000 17.18 2.77 38.83 3.18
2160 2183 3.119245 GGGCTGACATGACTAGTCGTAAA 60.119 47.826 17.18 0.00 38.83 2.01
2161 2184 3.858238 GGCTGACATGACTAGTCGTAAAC 59.142 47.826 17.18 11.57 38.83 2.01
2162 2185 3.858238 GCTGACATGACTAGTCGTAAACC 59.142 47.826 17.18 7.55 38.83 3.27
2163 2186 4.421948 CTGACATGACTAGTCGTAAACCC 58.578 47.826 17.18 5.99 38.83 4.11
2164 2187 3.827876 TGACATGACTAGTCGTAAACCCA 59.172 43.478 17.18 8.22 38.83 4.51
2165 2188 4.281435 TGACATGACTAGTCGTAAACCCAA 59.719 41.667 17.18 0.00 38.83 4.12
2166 2189 5.217978 ACATGACTAGTCGTAAACCCAAA 57.782 39.130 17.18 0.00 0.00 3.28
2167 2190 5.235516 ACATGACTAGTCGTAAACCCAAAG 58.764 41.667 17.18 4.72 0.00 2.77
2168 2191 4.942761 TGACTAGTCGTAAACCCAAAGT 57.057 40.909 17.85 0.00 0.00 2.66
2169 2192 4.624015 TGACTAGTCGTAAACCCAAAGTG 58.376 43.478 17.85 0.00 0.00 3.16
2170 2193 3.992427 GACTAGTCGTAAACCCAAAGTGG 59.008 47.826 7.22 0.00 37.25 4.00
2171 2194 1.601166 AGTCGTAAACCCAAAGTGGC 58.399 50.000 0.00 0.00 35.79 5.01
2172 2195 1.134037 AGTCGTAAACCCAAAGTGGCA 60.134 47.619 0.00 0.00 35.79 4.92
2173 2196 1.002142 GTCGTAAACCCAAAGTGGCAC 60.002 52.381 10.29 10.29 35.79 5.01
2174 2197 1.025812 CGTAAACCCAAAGTGGCACA 58.974 50.000 21.41 0.00 35.79 4.57
2175 2198 1.001815 CGTAAACCCAAAGTGGCACAG 60.002 52.381 21.41 9.03 41.80 3.66
2176 2199 2.303175 GTAAACCCAAAGTGGCACAGA 58.697 47.619 21.41 0.00 41.80 3.41
2177 2200 1.111277 AAACCCAAAGTGGCACAGAC 58.889 50.000 21.41 0.00 41.80 3.51
2178 2201 0.258774 AACCCAAAGTGGCACAGACT 59.741 50.000 21.41 0.00 41.80 3.24
2179 2202 0.258774 ACCCAAAGTGGCACAGACTT 59.741 50.000 21.41 1.75 41.80 3.01
2180 2203 1.493022 ACCCAAAGTGGCACAGACTTA 59.507 47.619 21.41 0.00 41.80 2.24
2181 2204 1.880027 CCCAAAGTGGCACAGACTTAC 59.120 52.381 21.41 0.00 41.80 2.34
2182 2205 2.571212 CCAAAGTGGCACAGACTTACA 58.429 47.619 21.41 0.00 41.80 2.41
2183 2206 2.549754 CCAAAGTGGCACAGACTTACAG 59.450 50.000 21.41 0.00 41.80 2.74
2184 2207 2.549754 CAAAGTGGCACAGACTTACAGG 59.450 50.000 21.41 0.00 41.80 4.00
2185 2208 0.687354 AGTGGCACAGACTTACAGGG 59.313 55.000 21.41 0.00 41.80 4.45
2186 2209 0.685097 GTGGCACAGACTTACAGGGA 59.315 55.000 13.86 0.00 41.80 4.20
2187 2210 0.685097 TGGCACAGACTTACAGGGAC 59.315 55.000 0.00 0.00 0.00 4.46
2188 2211 0.685097 GGCACAGACTTACAGGGACA 59.315 55.000 0.00 0.00 0.00 4.02
2189 2212 1.338200 GGCACAGACTTACAGGGACAG 60.338 57.143 0.00 0.00 0.00 3.51
2190 2213 1.338200 GCACAGACTTACAGGGACAGG 60.338 57.143 0.00 0.00 0.00 4.00
2191 2214 0.977395 ACAGACTTACAGGGACAGGC 59.023 55.000 0.00 0.00 0.00 4.85
2192 2215 0.976641 CAGACTTACAGGGACAGGCA 59.023 55.000 0.00 0.00 0.00 4.75
2193 2216 1.556911 CAGACTTACAGGGACAGGCAT 59.443 52.381 0.00 0.00 0.00 4.40
2194 2217 1.834263 AGACTTACAGGGACAGGCATC 59.166 52.381 0.00 0.00 0.00 3.91
2195 2218 0.912486 ACTTACAGGGACAGGCATCC 59.088 55.000 0.00 0.00 38.13 3.51
2196 2219 0.911769 CTTACAGGGACAGGCATCCA 59.088 55.000 9.72 0.00 40.96 3.41
2197 2220 1.492176 CTTACAGGGACAGGCATCCAT 59.508 52.381 9.72 0.00 40.96 3.41
2198 2221 4.573210 CAGGGACAGGCATCCATG 57.427 61.111 7.89 7.89 43.58 3.66
2199 2222 4.506076 AGGGACAGGCATCCATGA 57.494 55.556 9.72 0.00 40.96 3.07
2200 2223 1.918253 AGGGACAGGCATCCATGAC 59.082 57.895 9.72 0.00 40.96 3.06
2201 2224 1.152881 GGGACAGGCATCCATGACC 60.153 63.158 9.72 0.00 40.96 4.02
2202 2225 1.152881 GGACAGGCATCCATGACCC 60.153 63.158 0.00 0.00 38.77 4.46
2203 2226 1.609239 GACAGGCATCCATGACCCA 59.391 57.895 0.00 0.00 36.08 4.51
2204 2227 0.465097 GACAGGCATCCATGACCCAG 60.465 60.000 0.00 0.00 36.08 4.45
2205 2228 1.826921 CAGGCATCCATGACCCAGC 60.827 63.158 0.00 0.00 36.08 4.85
2206 2229 2.005266 AGGCATCCATGACCCAGCT 61.005 57.895 0.00 0.00 36.08 4.24
2207 2230 1.076485 GGCATCCATGACCCAGCTT 60.076 57.895 0.00 0.00 0.00 3.74
2208 2231 1.105759 GGCATCCATGACCCAGCTTC 61.106 60.000 0.00 0.00 0.00 3.86
2209 2232 1.442526 GCATCCATGACCCAGCTTCG 61.443 60.000 0.00 0.00 0.00 3.79
2210 2233 0.178767 CATCCATGACCCAGCTTCGA 59.821 55.000 0.00 0.00 0.00 3.71
2211 2234 0.911769 ATCCATGACCCAGCTTCGAA 59.088 50.000 0.00 0.00 0.00 3.71
2212 2235 0.036388 TCCATGACCCAGCTTCGAAC 60.036 55.000 0.00 0.00 0.00 3.95
2213 2236 1.361668 CCATGACCCAGCTTCGAACG 61.362 60.000 0.00 0.00 0.00 3.95
2214 2237 0.670546 CATGACCCAGCTTCGAACGT 60.671 55.000 0.00 0.00 0.00 3.99
2215 2238 0.670546 ATGACCCAGCTTCGAACGTG 60.671 55.000 0.00 0.00 0.00 4.49
2216 2239 1.300697 GACCCAGCTTCGAACGTGT 60.301 57.895 0.00 0.00 0.00 4.49
2217 2240 1.282930 GACCCAGCTTCGAACGTGTC 61.283 60.000 0.00 0.00 0.00 3.67
2225 2248 4.544762 CGAACGTGTCGGTCATCA 57.455 55.556 7.89 0.00 44.54 3.07
2226 2249 2.349843 CGAACGTGTCGGTCATCAG 58.650 57.895 7.89 0.00 44.54 2.90
2227 2250 1.674611 CGAACGTGTCGGTCATCAGC 61.675 60.000 7.89 0.00 44.54 4.26
2228 2251 0.666274 GAACGTGTCGGTCATCAGCA 60.666 55.000 2.27 0.00 43.67 4.41
2229 2252 0.249699 AACGTGTCGGTCATCAGCAA 60.250 50.000 0.00 0.00 0.00 3.91
2230 2253 0.667487 ACGTGTCGGTCATCAGCAAG 60.667 55.000 0.00 0.00 0.00 4.01
2231 2254 0.667487 CGTGTCGGTCATCAGCAAGT 60.667 55.000 0.00 0.00 0.00 3.16
2232 2255 0.792640 GTGTCGGTCATCAGCAAGTG 59.207 55.000 0.00 0.00 0.00 3.16
2233 2256 0.320683 TGTCGGTCATCAGCAAGTGG 60.321 55.000 0.00 0.00 0.00 4.00
2234 2257 1.021390 GTCGGTCATCAGCAAGTGGG 61.021 60.000 0.00 0.00 0.00 4.61
2235 2258 1.003355 CGGTCATCAGCAAGTGGGT 60.003 57.895 0.00 0.00 0.00 4.51
2236 2259 0.606401 CGGTCATCAGCAAGTGGGTT 60.606 55.000 0.00 0.00 0.00 4.11
2237 2260 1.168714 GGTCATCAGCAAGTGGGTTC 58.831 55.000 0.00 0.00 0.00 3.62
2238 2261 1.545428 GGTCATCAGCAAGTGGGTTCA 60.545 52.381 0.00 0.00 0.00 3.18
2239 2262 1.808945 GTCATCAGCAAGTGGGTTCAG 59.191 52.381 0.00 0.00 0.00 3.02
2240 2263 1.171308 CATCAGCAAGTGGGTTCAGG 58.829 55.000 0.00 0.00 0.00 3.86
2241 2264 0.610232 ATCAGCAAGTGGGTTCAGGC 60.610 55.000 0.00 0.00 0.00 4.85
2242 2265 1.228367 CAGCAAGTGGGTTCAGGCT 60.228 57.895 0.00 0.00 0.00 4.58
2243 2266 1.228367 AGCAAGTGGGTTCAGGCTG 60.228 57.895 8.58 8.58 0.00 4.85
2244 2267 1.529244 GCAAGTGGGTTCAGGCTGT 60.529 57.895 15.27 0.00 0.00 4.40
2245 2268 0.250727 GCAAGTGGGTTCAGGCTGTA 60.251 55.000 15.27 1.01 0.00 2.74
2246 2269 1.813513 CAAGTGGGTTCAGGCTGTAG 58.186 55.000 15.27 0.00 0.00 2.74
2247 2270 0.036875 AAGTGGGTTCAGGCTGTAGC 59.963 55.000 15.27 14.60 41.14 3.58
2248 2271 1.127567 AGTGGGTTCAGGCTGTAGCA 61.128 55.000 22.00 8.13 44.36 3.49
2249 2272 0.955919 GTGGGTTCAGGCTGTAGCAC 60.956 60.000 22.00 14.84 44.36 4.40
2250 2273 1.127567 TGGGTTCAGGCTGTAGCACT 61.128 55.000 22.00 0.00 44.36 4.40
2251 2274 0.674895 GGGTTCAGGCTGTAGCACTG 60.675 60.000 22.00 10.33 44.36 3.66
2252 2275 0.674895 GGTTCAGGCTGTAGCACTGG 60.675 60.000 16.95 1.48 44.36 4.00
2253 2276 0.674895 GTTCAGGCTGTAGCACTGGG 60.675 60.000 15.27 0.00 44.36 4.45
2254 2277 2.437359 CAGGCTGTAGCACTGGGC 60.437 66.667 6.28 0.00 44.36 5.36
2263 2286 2.124942 GCACTGGGCTAGCAGGAC 60.125 66.667 18.24 4.03 40.25 3.85
2264 2287 2.664081 GCACTGGGCTAGCAGGACT 61.664 63.158 18.24 0.00 40.25 3.85
2265 2288 1.519719 CACTGGGCTAGCAGGACTC 59.480 63.158 18.24 0.00 0.00 3.36
2266 2289 1.687493 ACTGGGCTAGCAGGACTCC 60.687 63.158 18.24 7.80 0.00 3.85
2267 2290 2.759973 TGGGCTAGCAGGACTCCG 60.760 66.667 18.24 0.00 0.00 4.63
2268 2291 3.541713 GGGCTAGCAGGACTCCGG 61.542 72.222 18.24 0.00 0.00 5.14
2269 2292 2.760385 GGCTAGCAGGACTCCGGT 60.760 66.667 18.24 0.00 0.00 5.28
2270 2293 1.455217 GGCTAGCAGGACTCCGGTA 60.455 63.158 18.24 0.00 0.00 4.02
2271 2294 1.041447 GGCTAGCAGGACTCCGGTAA 61.041 60.000 18.24 0.00 0.00 2.85
2272 2295 0.822164 GCTAGCAGGACTCCGGTAAA 59.178 55.000 10.63 0.00 0.00 2.01
2273 2296 1.471153 GCTAGCAGGACTCCGGTAAAC 60.471 57.143 10.63 0.00 0.00 2.01
2274 2297 1.136500 CTAGCAGGACTCCGGTAAACC 59.864 57.143 0.00 1.24 0.00 3.27
2284 2307 4.213666 GGTAAACCGGGCTGTAGC 57.786 61.111 6.32 0.00 41.14 3.58
2285 2308 1.812507 GGTAAACCGGGCTGTAGCG 60.813 63.158 6.32 0.00 43.26 4.26
2286 2309 1.812507 GTAAACCGGGCTGTAGCGG 60.813 63.158 6.32 0.00 43.26 5.52
2287 2310 3.021473 TAAACCGGGCTGTAGCGGG 62.021 63.158 6.32 10.03 43.26 6.13
2291 2314 3.845259 CGGGCTGTAGCGGGCTAA 61.845 66.667 1.27 0.00 43.26 3.09
2292 2315 2.203029 GGGCTGTAGCGGGCTAAC 60.203 66.667 1.27 0.00 43.26 2.34
2293 2316 2.582436 GGCTGTAGCGGGCTAACA 59.418 61.111 1.27 2.96 43.26 2.41
2294 2317 1.521681 GGCTGTAGCGGGCTAACAG 60.522 63.158 17.99 17.99 43.26 3.16
2295 2318 1.521681 GCTGTAGCGGGCTAACAGG 60.522 63.158 21.01 8.29 33.00 4.00
2296 2319 1.956629 GCTGTAGCGGGCTAACAGGA 61.957 60.000 21.01 0.00 33.00 3.86
2297 2320 0.179108 CTGTAGCGGGCTAACAGGAC 60.179 60.000 16.04 3.33 30.94 3.85
2298 2321 0.613853 TGTAGCGGGCTAACAGGACT 60.614 55.000 1.27 0.00 0.00 3.85
2299 2322 0.102663 GTAGCGGGCTAACAGGACTC 59.897 60.000 1.27 0.00 0.00 3.36
2300 2323 1.041447 TAGCGGGCTAACAGGACTCC 61.041 60.000 0.00 0.00 0.00 3.85
2301 2324 2.494918 CGGGCTAACAGGACTCCG 59.505 66.667 0.00 0.00 0.00 4.63
2302 2325 2.901042 GGGCTAACAGGACTCCGG 59.099 66.667 0.00 0.00 0.00 5.14
2303 2326 1.988406 GGGCTAACAGGACTCCGGT 60.988 63.158 0.00 0.00 32.35 5.28
2304 2327 0.685458 GGGCTAACAGGACTCCGGTA 60.685 60.000 0.00 0.00 30.50 4.02
2305 2328 0.459078 GGCTAACAGGACTCCGGTAC 59.541 60.000 0.00 0.00 30.50 3.34
2306 2329 1.472188 GCTAACAGGACTCCGGTACT 58.528 55.000 0.00 0.00 37.02 2.73
2307 2330 1.404748 GCTAACAGGACTCCGGTACTC 59.595 57.143 0.00 0.00 33.65 2.59
2308 2331 2.719739 CTAACAGGACTCCGGTACTCA 58.280 52.381 0.00 0.00 33.65 3.41
2309 2332 2.005370 AACAGGACTCCGGTACTCAA 57.995 50.000 0.00 0.00 33.65 3.02
2310 2333 2.005370 ACAGGACTCCGGTACTCAAA 57.995 50.000 0.00 0.00 33.65 2.69
2311 2334 1.893801 ACAGGACTCCGGTACTCAAAG 59.106 52.381 0.00 0.00 33.65 2.77
2312 2335 0.896226 AGGACTCCGGTACTCAAAGC 59.104 55.000 0.00 0.00 28.80 3.51
2313 2336 0.458025 GGACTCCGGTACTCAAAGCG 60.458 60.000 0.00 0.00 39.95 4.68
2314 2337 0.243095 GACTCCGGTACTCAAAGCGT 59.757 55.000 0.00 0.00 38.65 5.07
2315 2338 0.038526 ACTCCGGTACTCAAAGCGTG 60.039 55.000 0.00 0.00 38.65 5.34
2316 2339 0.242825 CTCCGGTACTCAAAGCGTGA 59.757 55.000 0.00 0.00 38.65 4.35
2317 2340 0.038892 TCCGGTACTCAAAGCGTGAC 60.039 55.000 0.00 0.00 38.65 3.67
2318 2341 0.319211 CCGGTACTCAAAGCGTGACA 60.319 55.000 0.00 0.00 38.65 3.58
2319 2342 1.671850 CCGGTACTCAAAGCGTGACAT 60.672 52.381 0.00 0.00 38.65 3.06
2320 2343 2.066262 CGGTACTCAAAGCGTGACATT 58.934 47.619 0.00 0.00 35.72 2.71
2321 2344 2.478894 CGGTACTCAAAGCGTGACATTT 59.521 45.455 0.00 0.00 35.72 2.32
2322 2345 3.423123 CGGTACTCAAAGCGTGACATTTC 60.423 47.826 0.00 0.00 35.72 2.17
2323 2346 3.120304 GGTACTCAAAGCGTGACATTTCC 60.120 47.826 0.00 0.00 31.13 3.13
2324 2347 1.880027 ACTCAAAGCGTGACATTTCCC 59.120 47.619 0.00 0.00 31.13 3.97
2325 2348 1.200020 CTCAAAGCGTGACATTTCCCC 59.800 52.381 0.00 0.00 31.13 4.81
2326 2349 0.109781 CAAAGCGTGACATTTCCCCG 60.110 55.000 0.00 0.00 0.00 5.73
2327 2350 0.250553 AAAGCGTGACATTTCCCCGA 60.251 50.000 0.00 0.00 0.00 5.14
2328 2351 0.250553 AAGCGTGACATTTCCCCGAA 60.251 50.000 0.00 0.00 0.00 4.30
2329 2352 0.673644 AGCGTGACATTTCCCCGAAG 60.674 55.000 0.00 0.00 0.00 3.79
2342 2365 4.996976 CGAAGGGACAGACACAGG 57.003 61.111 0.00 0.00 0.00 4.00
2343 2366 2.351777 CGAAGGGACAGACACAGGA 58.648 57.895 0.00 0.00 0.00 3.86
2344 2367 0.679505 CGAAGGGACAGACACAGGAA 59.320 55.000 0.00 0.00 0.00 3.36
2345 2368 1.605712 CGAAGGGACAGACACAGGAAC 60.606 57.143 0.00 0.00 0.00 3.62
2346 2369 0.393077 AAGGGACAGACACAGGAACG 59.607 55.000 0.00 0.00 0.00 3.95
2347 2370 0.469331 AGGGACAGACACAGGAACGA 60.469 55.000 0.00 0.00 0.00 3.85
2348 2371 0.391597 GGGACAGACACAGGAACGAA 59.608 55.000 0.00 0.00 0.00 3.85
2349 2372 1.605712 GGGACAGACACAGGAACGAAG 60.606 57.143 0.00 0.00 0.00 3.79
2350 2373 1.340248 GGACAGACACAGGAACGAAGA 59.660 52.381 0.00 0.00 0.00 2.87
2351 2374 2.223971 GGACAGACACAGGAACGAAGAA 60.224 50.000 0.00 0.00 0.00 2.52
2352 2375 3.053455 GACAGACACAGGAACGAAGAAG 58.947 50.000 0.00 0.00 0.00 2.85
2353 2376 2.224066 ACAGACACAGGAACGAAGAAGG 60.224 50.000 0.00 0.00 0.00 3.46
2354 2377 2.035961 CAGACACAGGAACGAAGAAGGA 59.964 50.000 0.00 0.00 0.00 3.36
2355 2378 2.036089 AGACACAGGAACGAAGAAGGAC 59.964 50.000 0.00 0.00 0.00 3.85
2356 2379 1.760613 ACACAGGAACGAAGAAGGACA 59.239 47.619 0.00 0.00 0.00 4.02
2357 2380 2.135933 CACAGGAACGAAGAAGGACAC 58.864 52.381 0.00 0.00 0.00 3.67
2358 2381 1.760613 ACAGGAACGAAGAAGGACACA 59.239 47.619 0.00 0.00 0.00 3.72
2359 2382 2.368875 ACAGGAACGAAGAAGGACACAT 59.631 45.455 0.00 0.00 0.00 3.21
2360 2383 2.738846 CAGGAACGAAGAAGGACACATG 59.261 50.000 0.00 0.00 0.00 3.21
2361 2384 1.464997 GGAACGAAGAAGGACACATGC 59.535 52.381 0.00 0.00 0.00 4.06
2362 2385 1.464997 GAACGAAGAAGGACACATGCC 59.535 52.381 0.00 0.00 0.00 4.40
2363 2386 0.670546 ACGAAGAAGGACACATGCCG 60.671 55.000 0.00 0.00 0.00 5.69
2364 2387 1.361668 CGAAGAAGGACACATGCCGG 61.362 60.000 0.00 0.00 0.00 6.13
2365 2388 1.648467 GAAGAAGGACACATGCCGGC 61.648 60.000 22.73 22.73 0.00 6.13
2366 2389 3.134127 GAAGGACACATGCCGGCC 61.134 66.667 26.77 6.80 0.00 6.13
2367 2390 3.628646 GAAGGACACATGCCGGCCT 62.629 63.158 26.77 12.40 0.00 5.19
2368 2391 3.925630 AAGGACACATGCCGGCCTG 62.926 63.158 27.62 27.62 0.00 4.85
2372 2395 4.488136 CACATGCCGGCCTGCCTA 62.488 66.667 28.90 8.10 0.00 3.93
2373 2396 3.727258 ACATGCCGGCCTGCCTAA 61.727 61.111 28.90 7.28 0.00 2.69
2374 2397 2.903855 CATGCCGGCCTGCCTAAG 60.904 66.667 26.77 0.00 0.00 2.18
2375 2398 3.411517 ATGCCGGCCTGCCTAAGT 61.412 61.111 26.77 0.00 0.00 2.24
2376 2399 3.704231 ATGCCGGCCTGCCTAAGTG 62.704 63.158 26.77 0.00 0.00 3.16
2377 2400 4.410400 GCCGGCCTGCCTAAGTGT 62.410 66.667 18.11 0.00 0.00 3.55
2378 2401 2.351276 CCGGCCTGCCTAAGTGTT 59.649 61.111 6.60 0.00 0.00 3.32
2379 2402 1.745489 CCGGCCTGCCTAAGTGTTC 60.745 63.158 6.60 0.00 0.00 3.18
2380 2403 1.745489 CGGCCTGCCTAAGTGTTCC 60.745 63.158 6.60 0.00 0.00 3.62
2381 2404 1.745489 GGCCTGCCTAAGTGTTCCG 60.745 63.158 0.00 0.00 0.00 4.30
2382 2405 1.745489 GCCTGCCTAAGTGTTCCGG 60.745 63.158 0.00 0.00 0.00 5.14
2383 2406 1.980052 CCTGCCTAAGTGTTCCGGA 59.020 57.895 0.00 0.00 0.00 5.14
2384 2407 0.108138 CCTGCCTAAGTGTTCCGGAG 60.108 60.000 3.34 0.00 0.00 4.63
2385 2408 0.741221 CTGCCTAAGTGTTCCGGAGC 60.741 60.000 11.99 11.99 0.00 4.70
2386 2409 1.295423 GCCTAAGTGTTCCGGAGCA 59.705 57.895 17.98 17.98 0.00 4.26
2387 2410 0.741221 GCCTAAGTGTTCCGGAGCAG 60.741 60.000 22.46 10.60 0.00 4.24
2388 2411 0.608640 CCTAAGTGTTCCGGAGCAGT 59.391 55.000 22.46 22.07 0.00 4.40
2389 2412 1.822990 CCTAAGTGTTCCGGAGCAGTA 59.177 52.381 26.57 17.61 0.00 2.74
2390 2413 2.159226 CCTAAGTGTTCCGGAGCAGTAG 60.159 54.545 26.57 24.18 0.00 2.57
2391 2414 0.037232 AAGTGTTCCGGAGCAGTAGC 60.037 55.000 26.57 13.12 42.56 3.58
2392 2415 1.185618 AGTGTTCCGGAGCAGTAGCA 61.186 55.000 25.38 0.00 45.49 3.49
2393 2416 0.320421 GTGTTCCGGAGCAGTAGCAA 60.320 55.000 22.46 0.00 45.49 3.91
2394 2417 0.037326 TGTTCCGGAGCAGTAGCAAG 60.037 55.000 17.98 0.00 45.49 4.01
2395 2418 1.079127 TTCCGGAGCAGTAGCAAGC 60.079 57.895 3.34 0.00 45.49 4.01
2396 2419 1.544825 TTCCGGAGCAGTAGCAAGCT 61.545 55.000 3.34 0.00 45.49 3.74
2397 2420 0.683179 TCCGGAGCAGTAGCAAGCTA 60.683 55.000 0.00 0.00 45.49 3.32
2398 2421 0.528684 CCGGAGCAGTAGCAAGCTAC 60.529 60.000 21.42 21.42 46.70 3.58
2404 2427 4.542075 GTAGCAAGCTACCAGGGC 57.458 61.111 18.98 0.00 42.11 5.19
2405 2428 1.908483 GTAGCAAGCTACCAGGGCT 59.092 57.895 18.98 0.00 42.11 5.19
2406 2429 0.179070 GTAGCAAGCTACCAGGGCTC 60.179 60.000 18.98 0.00 42.11 4.70
2407 2430 1.676678 TAGCAAGCTACCAGGGCTCG 61.677 60.000 0.00 0.00 39.30 5.03
2408 2431 2.187946 CAAGCTACCAGGGCTCGG 59.812 66.667 0.00 0.00 39.30 4.63
2409 2432 2.284699 AAGCTACCAGGGCTCGGT 60.285 61.111 5.45 5.45 39.30 4.69
2410 2433 2.660064 AAGCTACCAGGGCTCGGTG 61.660 63.158 9.95 2.60 39.30 4.94
2411 2434 4.162690 GCTACCAGGGCTCGGTGG 62.163 72.222 9.95 8.23 37.33 4.61
2412 2435 2.363795 CTACCAGGGCTCGGTGGA 60.364 66.667 9.95 0.00 37.18 4.02
2413 2436 1.987855 CTACCAGGGCTCGGTGGAA 60.988 63.158 9.95 0.00 37.18 3.53
2414 2437 1.961180 CTACCAGGGCTCGGTGGAAG 61.961 65.000 9.95 0.00 37.18 3.46
2415 2438 4.785453 CCAGGGCTCGGTGGAAGC 62.785 72.222 0.00 0.00 35.67 3.86
2416 2439 4.020617 CAGGGCTCGGTGGAAGCA 62.021 66.667 0.00 0.00 0.00 3.91
2417 2440 4.021925 AGGGCTCGGTGGAAGCAC 62.022 66.667 0.00 0.00 0.00 4.40
2418 2441 4.021925 GGGCTCGGTGGAAGCACT 62.022 66.667 0.00 0.00 0.00 4.40
2419 2442 2.656069 GGGCTCGGTGGAAGCACTA 61.656 63.158 0.00 0.00 0.00 2.74
2420 2443 1.153549 GGCTCGGTGGAAGCACTAG 60.154 63.158 0.00 0.00 0.00 2.57
2421 2444 1.153549 GCTCGGTGGAAGCACTAGG 60.154 63.158 0.00 0.00 0.00 3.02
2422 2445 1.605058 GCTCGGTGGAAGCACTAGGA 61.605 60.000 0.00 0.00 0.00 2.94
2423 2446 0.457851 CTCGGTGGAAGCACTAGGAG 59.542 60.000 0.00 0.00 0.00 3.69
2424 2447 0.039180 TCGGTGGAAGCACTAGGAGA 59.961 55.000 0.00 0.00 0.00 3.71
2425 2448 0.173708 CGGTGGAAGCACTAGGAGAC 59.826 60.000 0.00 0.00 0.00 3.36
2426 2449 1.267121 GGTGGAAGCACTAGGAGACA 58.733 55.000 0.00 0.00 0.00 3.41
2427 2450 1.834263 GGTGGAAGCACTAGGAGACAT 59.166 52.381 0.00 0.00 0.00 3.06
2428 2451 2.237392 GGTGGAAGCACTAGGAGACATT 59.763 50.000 0.00 0.00 0.00 2.71
2429 2452 3.307762 GGTGGAAGCACTAGGAGACATTT 60.308 47.826 0.00 0.00 0.00 2.32
2430 2453 3.935828 GTGGAAGCACTAGGAGACATTTC 59.064 47.826 0.00 0.00 0.00 2.17
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
188 190 6.366332 CAGCGAGTAACTGAAACAAGAGTTAT 59.634 38.462 0.00 0.00 37.10 1.89
241 243 6.071784 TGCAGAAATGAATAGAATGTGCAACT 60.072 34.615 0.00 0.00 35.57 3.16
442 444 5.409826 CCTAAAGCAGAGTCTGTTACCAAAG 59.590 44.000 21.06 9.65 33.43 2.77
547 550 5.353394 ACTGTACTGTGAAGTTTGAGGAA 57.647 39.130 4.39 0.00 0.00 3.36
709 712 3.200593 CAGCACCGCATGGCTCTC 61.201 66.667 0.00 0.00 38.56 3.20
848 851 0.983378 ACCTTAAGCCCTCTCGCCAT 60.983 55.000 0.00 0.00 0.00 4.40
903 906 8.552296 ACACTAATCCTACAGAATCAAGGAAAT 58.448 33.333 3.67 0.38 42.53 2.17
1068 1072 1.106351 TGGTGTTGCTGTTGCCGAAT 61.106 50.000 0.00 0.00 38.71 3.34
1456 1460 4.755123 ACAAGCCATGACTTACAGTTGTAC 59.245 41.667 0.00 0.00 0.00 2.90
1508 1519 2.299582 TCCACCACAAAATCAAGCATGG 59.700 45.455 0.00 0.00 0.00 3.66
1623 1646 5.220739 GCATATGCGCCTATCATTTCCTAAG 60.221 44.000 12.82 0.00 0.00 2.18
1674 1697 7.595819 TTCCATGGTTGAAACAAATAACTCT 57.404 32.000 12.58 0.00 0.00 3.24
1801 1824 4.196193 TGGCCTCCAAGATGTATTAAACG 58.804 43.478 3.32 0.00 0.00 3.60
1897 1920 2.301870 TCTGAAGTTATGCCCGACTTGT 59.698 45.455 1.08 0.00 36.31 3.16
1954 1977 2.165437 GGTCCTGACACAAACTTTGCAA 59.835 45.455 0.00 0.00 0.00 4.08
1968 1991 1.753078 CATCGAGTCGGGGTCCTGA 60.753 63.158 13.54 0.00 0.00 3.86
1969 1992 2.005960 GACATCGAGTCGGGGTCCTG 62.006 65.000 20.03 9.27 37.53 3.86
1970 1993 1.753463 GACATCGAGTCGGGGTCCT 60.753 63.158 20.03 0.00 37.53 3.85
1971 1994 2.806237 GACATCGAGTCGGGGTCC 59.194 66.667 20.03 8.02 37.53 4.46
1982 2005 2.590073 GGCTAGATCGATGTGACATCG 58.410 52.381 34.77 34.77 42.38 3.84
1983 2006 2.590073 CGGCTAGATCGATGTGACATC 58.410 52.381 15.36 15.36 0.00 3.06
1984 2007 1.270826 CCGGCTAGATCGATGTGACAT 59.729 52.381 0.54 0.00 0.00 3.06
1985 2008 0.668535 CCGGCTAGATCGATGTGACA 59.331 55.000 0.54 0.00 0.00 3.58
1986 2009 0.669077 ACCGGCTAGATCGATGTGAC 59.331 55.000 0.54 0.00 0.00 3.67
1987 2010 2.265589 TACCGGCTAGATCGATGTGA 57.734 50.000 0.54 0.00 0.00 3.58
1988 2011 2.034179 TGTTACCGGCTAGATCGATGTG 59.966 50.000 0.54 0.00 0.00 3.21
1989 2012 2.034305 GTGTTACCGGCTAGATCGATGT 59.966 50.000 0.54 0.00 0.00 3.06
1990 2013 2.607282 GGTGTTACCGGCTAGATCGATG 60.607 54.545 0.54 0.00 0.00 3.84
1991 2014 1.612463 GGTGTTACCGGCTAGATCGAT 59.388 52.381 0.00 0.00 0.00 3.59
1992 2015 1.027357 GGTGTTACCGGCTAGATCGA 58.973 55.000 0.00 0.00 0.00 3.59
1993 2016 1.001597 GAGGTGTTACCGGCTAGATCG 60.002 57.143 0.00 0.00 44.90 3.69
1994 2017 2.029623 TGAGGTGTTACCGGCTAGATC 58.970 52.381 0.00 0.00 44.90 2.75
1995 2018 2.154567 TGAGGTGTTACCGGCTAGAT 57.845 50.000 0.00 0.00 44.90 1.98
1996 2019 2.154567 ATGAGGTGTTACCGGCTAGA 57.845 50.000 0.00 0.00 44.90 2.43
1997 2020 3.572682 TGATATGAGGTGTTACCGGCTAG 59.427 47.826 0.00 0.00 44.90 3.42
1998 2021 3.319972 GTGATATGAGGTGTTACCGGCTA 59.680 47.826 0.00 0.00 44.90 3.93
1999 2022 2.102588 GTGATATGAGGTGTTACCGGCT 59.897 50.000 0.00 0.00 44.90 5.52
2000 2023 2.102588 AGTGATATGAGGTGTTACCGGC 59.897 50.000 0.00 0.00 44.90 6.13
2001 2024 4.402056 AAGTGATATGAGGTGTTACCGG 57.598 45.455 0.00 0.00 44.90 5.28
2002 2025 4.034048 GCAAAGTGATATGAGGTGTTACCG 59.966 45.833 0.00 0.00 44.90 4.02
2003 2026 4.034048 CGCAAAGTGATATGAGGTGTTACC 59.966 45.833 0.00 0.00 38.99 2.85
2004 2027 4.034048 CCGCAAAGTGATATGAGGTGTTAC 59.966 45.833 0.00 0.00 32.55 2.50
2005 2028 4.188462 CCGCAAAGTGATATGAGGTGTTA 58.812 43.478 0.00 0.00 32.55 2.41
2006 2029 3.009723 CCGCAAAGTGATATGAGGTGTT 58.990 45.455 0.00 0.00 32.55 3.32
2007 2030 2.632377 CCGCAAAGTGATATGAGGTGT 58.368 47.619 0.00 0.00 32.55 4.16
2008 2031 1.331756 GCCGCAAAGTGATATGAGGTG 59.668 52.381 0.00 0.00 38.58 4.00
2009 2032 1.668419 GCCGCAAAGTGATATGAGGT 58.332 50.000 0.00 0.00 38.58 3.85
2010 2033 0.947244 GGCCGCAAAGTGATATGAGG 59.053 55.000 0.00 0.00 39.25 3.86
2011 2034 1.869767 GAGGCCGCAAAGTGATATGAG 59.130 52.381 0.00 0.00 0.00 2.90
2012 2035 1.209261 TGAGGCCGCAAAGTGATATGA 59.791 47.619 6.75 0.00 0.00 2.15
2013 2036 1.331756 GTGAGGCCGCAAAGTGATATG 59.668 52.381 12.05 0.00 0.00 1.78
2014 2037 1.668419 GTGAGGCCGCAAAGTGATAT 58.332 50.000 12.05 0.00 0.00 1.63
2015 2038 0.739462 CGTGAGGCCGCAAAGTGATA 60.739 55.000 12.05 0.00 0.00 2.15
2016 2039 2.034879 CGTGAGGCCGCAAAGTGAT 61.035 57.895 12.05 0.00 0.00 3.06
2017 2040 2.664851 CGTGAGGCCGCAAAGTGA 60.665 61.111 12.05 0.00 0.00 3.41
2025 2048 4.508128 ATACCGTGCGTGAGGCCG 62.508 66.667 0.00 0.00 42.61 6.13
2026 2049 2.585247 GATACCGTGCGTGAGGCC 60.585 66.667 0.00 0.00 42.61 5.19
2027 2050 2.585247 GGATACCGTGCGTGAGGC 60.585 66.667 0.00 0.00 43.96 4.70
2048 2071 2.064014 GAAAAGGTAAGACGACACCCG 58.936 52.381 0.00 0.00 45.44 5.28
2049 2072 2.420642 GGAAAAGGTAAGACGACACCC 58.579 52.381 0.00 0.00 35.25 4.61
2050 2073 2.420642 GGGAAAAGGTAAGACGACACC 58.579 52.381 0.00 0.00 34.86 4.16
2051 2074 2.064014 CGGGAAAAGGTAAGACGACAC 58.936 52.381 0.00 0.00 0.00 3.67
2052 2075 1.001181 CCGGGAAAAGGTAAGACGACA 59.999 52.381 0.00 0.00 0.00 4.35
2053 2076 1.673923 CCCGGGAAAAGGTAAGACGAC 60.674 57.143 18.48 0.00 0.00 4.34
2054 2077 0.609662 CCCGGGAAAAGGTAAGACGA 59.390 55.000 18.48 0.00 0.00 4.20
2055 2078 0.609662 TCCCGGGAAAAGGTAAGACG 59.390 55.000 24.50 0.00 0.00 4.18
2056 2079 1.339438 GGTCCCGGGAAAAGGTAAGAC 60.339 57.143 28.84 9.16 0.00 3.01
2057 2080 0.986527 GGTCCCGGGAAAAGGTAAGA 59.013 55.000 28.84 0.00 0.00 2.10
2058 2081 0.392060 CGGTCCCGGGAAAAGGTAAG 60.392 60.000 28.84 6.57 35.56 2.34
2059 2082 1.126948 ACGGTCCCGGGAAAAGGTAA 61.127 55.000 28.84 0.00 44.69 2.85
2060 2083 1.126948 AACGGTCCCGGGAAAAGGTA 61.127 55.000 28.84 0.00 44.69 3.08
2061 2084 1.998444 AAACGGTCCCGGGAAAAGGT 61.998 55.000 28.84 17.68 44.69 3.50
2062 2085 1.228337 AAACGGTCCCGGGAAAAGG 60.228 57.895 28.84 16.97 44.69 3.11
2063 2086 1.953772 CAAACGGTCCCGGGAAAAG 59.046 57.895 28.84 21.49 44.69 2.27
2064 2087 2.194889 GCAAACGGTCCCGGGAAAA 61.195 57.895 28.84 0.00 44.69 2.29
2065 2088 2.595172 GCAAACGGTCCCGGGAAA 60.595 61.111 28.84 0.00 44.69 3.13
2066 2089 4.992511 CGCAAACGGTCCCGGGAA 62.993 66.667 28.84 6.65 44.69 3.97
2071 2094 3.263503 GAAAGGCGCAAACGGTCCC 62.264 63.158 10.83 0.00 40.57 4.46
2072 2095 2.254350 GAAAGGCGCAAACGGTCC 59.746 61.111 10.83 0.00 40.57 4.46
2073 2096 2.127383 CGAAAGGCGCAAACGGTC 60.127 61.111 10.83 0.00 40.57 4.79
2085 2108 3.675225 CCATCATATACGTGAGCCGAAAG 59.325 47.826 0.00 0.00 40.70 2.62
2086 2109 3.069016 ACCATCATATACGTGAGCCGAAA 59.931 43.478 0.00 0.00 40.70 3.46
2087 2110 2.626266 ACCATCATATACGTGAGCCGAA 59.374 45.455 0.00 0.00 40.70 4.30
2088 2111 2.030274 CACCATCATATACGTGAGCCGA 60.030 50.000 0.00 0.00 40.70 5.54
2089 2112 2.288213 ACACCATCATATACGTGAGCCG 60.288 50.000 0.00 0.00 44.03 5.52
2090 2113 3.318017 GACACCATCATATACGTGAGCC 58.682 50.000 0.00 0.00 0.00 4.70
2091 2114 2.980476 CGACACCATCATATACGTGAGC 59.020 50.000 0.00 0.00 0.00 4.26
2092 2115 2.980476 GCGACACCATCATATACGTGAG 59.020 50.000 0.00 0.00 0.00 3.51
2093 2116 2.621526 AGCGACACCATCATATACGTGA 59.378 45.455 0.00 0.00 0.00 4.35
2094 2117 3.013276 AGCGACACCATCATATACGTG 57.987 47.619 0.00 0.00 0.00 4.49
2095 2118 3.366070 GCTAGCGACACCATCATATACGT 60.366 47.826 0.00 0.00 0.00 3.57
2096 2119 3.172050 GCTAGCGACACCATCATATACG 58.828 50.000 0.00 0.00 0.00 3.06
2097 2120 4.174411 TGCTAGCGACACCATCATATAC 57.826 45.455 10.77 0.00 0.00 1.47
2098 2121 4.142160 GGATGCTAGCGACACCATCATATA 60.142 45.833 10.77 0.00 36.64 0.86
2099 2122 3.368843 GGATGCTAGCGACACCATCATAT 60.369 47.826 10.77 0.00 36.64 1.78
2100 2123 2.029020 GGATGCTAGCGACACCATCATA 60.029 50.000 10.77 0.00 36.64 2.15
2101 2124 1.270518 GGATGCTAGCGACACCATCAT 60.271 52.381 10.77 0.00 36.64 2.45
2102 2125 0.104855 GGATGCTAGCGACACCATCA 59.895 55.000 10.77 0.00 36.64 3.07
2103 2126 0.104855 TGGATGCTAGCGACACCATC 59.895 55.000 10.77 6.09 34.73 3.51
2104 2127 0.761187 ATGGATGCTAGCGACACCAT 59.239 50.000 20.87 20.87 33.98 3.55
2105 2128 1.408969 TATGGATGCTAGCGACACCA 58.591 50.000 18.88 18.88 0.00 4.17
2106 2129 2.029020 TCATATGGATGCTAGCGACACC 60.029 50.000 10.77 10.79 32.62 4.16
2107 2130 2.989840 GTCATATGGATGCTAGCGACAC 59.010 50.000 10.77 0.81 32.62 3.67
2108 2131 2.627699 TGTCATATGGATGCTAGCGACA 59.372 45.455 10.77 11.54 32.62 4.35
2109 2132 3.303881 TGTCATATGGATGCTAGCGAC 57.696 47.619 10.77 9.02 32.62 5.19
2110 2133 3.306294 CCTTGTCATATGGATGCTAGCGA 60.306 47.826 10.77 0.00 32.62 4.93
2111 2134 2.998670 CCTTGTCATATGGATGCTAGCG 59.001 50.000 10.77 0.00 32.62 4.26
2112 2135 4.252073 CTCCTTGTCATATGGATGCTAGC 58.748 47.826 8.10 8.10 32.65 3.42
2113 2136 4.252073 GCTCCTTGTCATATGGATGCTAG 58.748 47.826 2.13 0.00 32.65 3.42
2114 2137 3.008375 GGCTCCTTGTCATATGGATGCTA 59.992 47.826 2.13 0.00 32.65 3.49
2115 2138 2.224719 GGCTCCTTGTCATATGGATGCT 60.225 50.000 2.13 0.00 32.65 3.79
2116 2139 2.157738 GGCTCCTTGTCATATGGATGC 58.842 52.381 2.13 0.00 32.65 3.91
2117 2140 2.787994 GGGCTCCTTGTCATATGGATG 58.212 52.381 2.13 0.00 32.65 3.51
2118 2141 1.349026 CGGGCTCCTTGTCATATGGAT 59.651 52.381 2.13 0.00 32.65 3.41
2119 2142 0.758734 CGGGCTCCTTGTCATATGGA 59.241 55.000 2.13 0.00 0.00 3.41
2120 2143 0.250467 CCGGGCTCCTTGTCATATGG 60.250 60.000 2.13 0.00 0.00 2.74
2121 2144 0.250467 CCCGGGCTCCTTGTCATATG 60.250 60.000 8.08 0.00 0.00 1.78
2122 2145 2.056906 GCCCGGGCTCCTTGTCATAT 62.057 60.000 38.76 0.00 38.26 1.78
2123 2146 2.742116 GCCCGGGCTCCTTGTCATA 61.742 63.158 38.76 0.00 38.26 2.15
2124 2147 4.115199 GCCCGGGCTCCTTGTCAT 62.115 66.667 38.76 0.00 38.26 3.06
2134 2157 2.650813 CTAGTCATGTCAGCCCGGGC 62.651 65.000 39.29 39.29 42.33 6.13
2135 2158 1.330655 ACTAGTCATGTCAGCCCGGG 61.331 60.000 19.09 19.09 0.00 5.73
2136 2159 0.103208 GACTAGTCATGTCAGCCCGG 59.897 60.000 18.20 0.00 34.80 5.73
2137 2160 0.248661 CGACTAGTCATGTCAGCCCG 60.249 60.000 22.37 1.38 34.37 6.13
2138 2161 0.818296 ACGACTAGTCATGTCAGCCC 59.182 55.000 22.37 0.00 34.37 5.19
2139 2162 3.777465 TTACGACTAGTCATGTCAGCC 57.223 47.619 22.37 0.00 34.37 4.85
2140 2163 3.858238 GGTTTACGACTAGTCATGTCAGC 59.142 47.826 22.37 9.28 34.37 4.26
2141 2164 4.082408 TGGGTTTACGACTAGTCATGTCAG 60.082 45.833 22.37 7.59 34.37 3.51
2142 2165 3.827876 TGGGTTTACGACTAGTCATGTCA 59.172 43.478 22.37 8.10 34.37 3.58
2143 2166 4.445452 TGGGTTTACGACTAGTCATGTC 57.555 45.455 22.37 8.28 0.00 3.06
2144 2167 4.877378 TTGGGTTTACGACTAGTCATGT 57.123 40.909 22.37 14.86 0.00 3.21
2145 2168 5.120208 CACTTTGGGTTTACGACTAGTCATG 59.880 44.000 22.37 9.72 0.00 3.07
2146 2169 5.235516 CACTTTGGGTTTACGACTAGTCAT 58.764 41.667 22.37 10.40 0.00 3.06
2147 2170 4.501915 CCACTTTGGGTTTACGACTAGTCA 60.502 45.833 22.37 0.95 32.67 3.41
2148 2171 3.992427 CCACTTTGGGTTTACGACTAGTC 59.008 47.826 13.18 13.18 32.67 2.59
2149 2172 3.804759 GCCACTTTGGGTTTACGACTAGT 60.805 47.826 0.00 0.00 38.19 2.57
2150 2173 2.740447 GCCACTTTGGGTTTACGACTAG 59.260 50.000 0.00 0.00 38.19 2.57
2151 2174 2.104451 TGCCACTTTGGGTTTACGACTA 59.896 45.455 0.00 0.00 38.19 2.59
2152 2175 1.134037 TGCCACTTTGGGTTTACGACT 60.134 47.619 0.00 0.00 38.19 4.18
2153 2176 1.002142 GTGCCACTTTGGGTTTACGAC 60.002 52.381 0.00 0.00 38.19 4.34
2154 2177 1.310904 GTGCCACTTTGGGTTTACGA 58.689 50.000 0.00 0.00 38.19 3.43
2155 2178 1.001815 CTGTGCCACTTTGGGTTTACG 60.002 52.381 0.00 0.00 38.19 3.18
2156 2179 2.034179 GTCTGTGCCACTTTGGGTTTAC 59.966 50.000 0.00 0.00 38.19 2.01
2157 2180 2.092103 AGTCTGTGCCACTTTGGGTTTA 60.092 45.455 0.00 0.00 38.19 2.01
2158 2181 1.111277 GTCTGTGCCACTTTGGGTTT 58.889 50.000 0.00 0.00 38.19 3.27
2159 2182 0.258774 AGTCTGTGCCACTTTGGGTT 59.741 50.000 0.00 0.00 38.19 4.11
2160 2183 0.258774 AAGTCTGTGCCACTTTGGGT 59.741 50.000 0.00 0.00 38.19 4.51
2161 2184 1.880027 GTAAGTCTGTGCCACTTTGGG 59.120 52.381 0.00 0.00 38.19 4.12
2162 2185 2.549754 CTGTAAGTCTGTGCCACTTTGG 59.450 50.000 0.00 0.00 41.55 3.28
2163 2186 2.549754 CCTGTAAGTCTGTGCCACTTTG 59.450 50.000 0.00 0.00 35.63 2.77
2164 2187 2.487265 CCCTGTAAGTCTGTGCCACTTT 60.487 50.000 0.00 0.00 35.63 2.66
2165 2188 1.072331 CCCTGTAAGTCTGTGCCACTT 59.928 52.381 0.00 0.00 37.80 3.16
2166 2189 0.687354 CCCTGTAAGTCTGTGCCACT 59.313 55.000 0.00 0.00 0.00 4.00
2167 2190 0.685097 TCCCTGTAAGTCTGTGCCAC 59.315 55.000 0.00 0.00 0.00 5.01
2168 2191 0.685097 GTCCCTGTAAGTCTGTGCCA 59.315 55.000 0.00 0.00 0.00 4.92
2169 2192 0.685097 TGTCCCTGTAAGTCTGTGCC 59.315 55.000 0.00 0.00 0.00 5.01
2170 2193 1.338200 CCTGTCCCTGTAAGTCTGTGC 60.338 57.143 0.00 0.00 0.00 4.57
2171 2194 1.338200 GCCTGTCCCTGTAAGTCTGTG 60.338 57.143 0.00 0.00 0.00 3.66
2172 2195 0.977395 GCCTGTCCCTGTAAGTCTGT 59.023 55.000 0.00 0.00 0.00 3.41
2173 2196 0.976641 TGCCTGTCCCTGTAAGTCTG 59.023 55.000 0.00 0.00 0.00 3.51
2174 2197 1.834263 GATGCCTGTCCCTGTAAGTCT 59.166 52.381 0.00 0.00 0.00 3.24
2175 2198 1.134371 GGATGCCTGTCCCTGTAAGTC 60.134 57.143 0.00 0.00 31.82 3.01
2176 2199 0.912486 GGATGCCTGTCCCTGTAAGT 59.088 55.000 0.00 0.00 31.82 2.24
2177 2200 0.911769 TGGATGCCTGTCCCTGTAAG 59.088 55.000 0.00 0.00 37.48 2.34
2178 2201 1.212688 CATGGATGCCTGTCCCTGTAA 59.787 52.381 0.00 0.00 37.48 2.41
2179 2202 0.839277 CATGGATGCCTGTCCCTGTA 59.161 55.000 0.00 0.00 37.48 2.74
2180 2203 0.915872 TCATGGATGCCTGTCCCTGT 60.916 55.000 0.00 0.00 37.48 4.00
2181 2204 0.465097 GTCATGGATGCCTGTCCCTG 60.465 60.000 0.00 0.00 37.48 4.45
2182 2205 1.639635 GGTCATGGATGCCTGTCCCT 61.640 60.000 0.00 0.00 37.48 4.20
2183 2206 1.152881 GGTCATGGATGCCTGTCCC 60.153 63.158 0.00 0.00 37.48 4.46
2184 2207 1.152881 GGGTCATGGATGCCTGTCC 60.153 63.158 0.00 0.00 38.81 4.02
2185 2208 0.465097 CTGGGTCATGGATGCCTGTC 60.465 60.000 0.00 0.00 0.00 3.51
2186 2209 1.611419 CTGGGTCATGGATGCCTGT 59.389 57.895 0.00 0.00 0.00 4.00
2187 2210 1.826921 GCTGGGTCATGGATGCCTG 60.827 63.158 0.00 0.00 0.00 4.85
2188 2211 1.578215 AAGCTGGGTCATGGATGCCT 61.578 55.000 0.00 0.00 0.00 4.75
2189 2212 1.076485 AAGCTGGGTCATGGATGCC 60.076 57.895 0.00 0.00 0.00 4.40
2190 2213 1.442526 CGAAGCTGGGTCATGGATGC 61.443 60.000 0.00 0.00 0.00 3.91
2191 2214 0.178767 TCGAAGCTGGGTCATGGATG 59.821 55.000 0.00 0.00 0.00 3.51
2192 2215 0.911769 TTCGAAGCTGGGTCATGGAT 59.088 50.000 0.00 0.00 0.00 3.41
2193 2216 0.036388 GTTCGAAGCTGGGTCATGGA 60.036 55.000 0.00 0.00 0.00 3.41
2194 2217 1.361668 CGTTCGAAGCTGGGTCATGG 61.362 60.000 0.00 0.00 0.00 3.66
2195 2218 0.670546 ACGTTCGAAGCTGGGTCATG 60.671 55.000 0.00 0.00 0.00 3.07
2196 2219 0.670546 CACGTTCGAAGCTGGGTCAT 60.671 55.000 0.00 0.00 0.00 3.06
2197 2220 1.300620 CACGTTCGAAGCTGGGTCA 60.301 57.895 0.00 0.00 0.00 4.02
2198 2221 1.282930 GACACGTTCGAAGCTGGGTC 61.283 60.000 10.51 10.51 0.00 4.46
2199 2222 1.300697 GACACGTTCGAAGCTGGGT 60.301 57.895 0.00 0.00 0.00 4.51
2200 2223 3.550656 GACACGTTCGAAGCTGGG 58.449 61.111 0.00 0.00 0.00 4.45
2209 2232 0.666274 TGCTGATGACCGACACGTTC 60.666 55.000 0.00 0.00 0.00 3.95
2210 2233 0.249699 TTGCTGATGACCGACACGTT 60.250 50.000 0.00 0.00 0.00 3.99
2211 2234 0.667487 CTTGCTGATGACCGACACGT 60.667 55.000 0.00 0.00 0.00 4.49
2212 2235 0.667487 ACTTGCTGATGACCGACACG 60.667 55.000 0.00 0.00 0.00 4.49
2213 2236 0.792640 CACTTGCTGATGACCGACAC 59.207 55.000 0.00 0.00 0.00 3.67
2214 2237 0.320683 CCACTTGCTGATGACCGACA 60.321 55.000 0.00 0.00 0.00 4.35
2215 2238 1.021390 CCCACTTGCTGATGACCGAC 61.021 60.000 0.00 0.00 0.00 4.79
2216 2239 1.296392 CCCACTTGCTGATGACCGA 59.704 57.895 0.00 0.00 0.00 4.69
2217 2240 0.606401 AACCCACTTGCTGATGACCG 60.606 55.000 0.00 0.00 0.00 4.79
2218 2241 1.168714 GAACCCACTTGCTGATGACC 58.831 55.000 0.00 0.00 0.00 4.02
2219 2242 1.808945 CTGAACCCACTTGCTGATGAC 59.191 52.381 0.00 0.00 0.00 3.06
2220 2243 1.271543 CCTGAACCCACTTGCTGATGA 60.272 52.381 0.00 0.00 0.00 2.92
2221 2244 1.171308 CCTGAACCCACTTGCTGATG 58.829 55.000 0.00 0.00 0.00 3.07
2222 2245 0.610232 GCCTGAACCCACTTGCTGAT 60.610 55.000 0.00 0.00 0.00 2.90
2223 2246 1.228245 GCCTGAACCCACTTGCTGA 60.228 57.895 0.00 0.00 0.00 4.26
2224 2247 1.228367 AGCCTGAACCCACTTGCTG 60.228 57.895 0.00 0.00 0.00 4.41
2225 2248 1.228367 CAGCCTGAACCCACTTGCT 60.228 57.895 0.00 0.00 0.00 3.91
2226 2249 0.250727 TACAGCCTGAACCCACTTGC 60.251 55.000 0.00 0.00 0.00 4.01
2227 2250 1.813513 CTACAGCCTGAACCCACTTG 58.186 55.000 0.00 0.00 0.00 3.16
2228 2251 0.036875 GCTACAGCCTGAACCCACTT 59.963 55.000 0.00 0.00 34.31 3.16
2229 2252 1.127567 TGCTACAGCCTGAACCCACT 61.128 55.000 0.00 0.00 41.18 4.00
2230 2253 0.955919 GTGCTACAGCCTGAACCCAC 60.956 60.000 0.00 0.00 41.18 4.61
2231 2254 1.127567 AGTGCTACAGCCTGAACCCA 61.128 55.000 0.00 0.00 41.18 4.51
2232 2255 0.674895 CAGTGCTACAGCCTGAACCC 60.675 60.000 0.00 0.00 39.83 4.11
2233 2256 0.674895 CCAGTGCTACAGCCTGAACC 60.675 60.000 16.52 0.00 39.83 3.62
2234 2257 0.674895 CCCAGTGCTACAGCCTGAAC 60.675 60.000 16.52 2.30 39.83 3.18
2235 2258 1.679311 CCCAGTGCTACAGCCTGAA 59.321 57.895 16.52 0.00 39.83 3.02
2236 2259 2.959484 GCCCAGTGCTACAGCCTGA 61.959 63.158 16.52 0.00 39.83 3.86
2237 2260 2.437359 GCCCAGTGCTACAGCCTG 60.437 66.667 10.84 10.84 41.18 4.85
2246 2269 2.124942 GTCCTGCTAGCCCAGTGC 60.125 66.667 13.29 0.00 41.71 4.40
2247 2270 1.519719 GAGTCCTGCTAGCCCAGTG 59.480 63.158 13.29 0.00 0.00 3.66
2248 2271 1.687493 GGAGTCCTGCTAGCCCAGT 60.687 63.158 13.29 0.00 0.00 4.00
2249 2272 2.790791 CGGAGTCCTGCTAGCCCAG 61.791 68.421 13.29 3.40 0.00 4.45
2250 2273 2.759973 CGGAGTCCTGCTAGCCCA 60.760 66.667 13.29 0.00 0.00 5.36
2251 2274 2.923634 TACCGGAGTCCTGCTAGCCC 62.924 65.000 9.46 3.65 0.00 5.19
2252 2275 1.041447 TTACCGGAGTCCTGCTAGCC 61.041 60.000 9.46 0.00 0.00 3.93
2253 2276 0.822164 TTTACCGGAGTCCTGCTAGC 59.178 55.000 9.46 8.10 0.00 3.42
2254 2277 1.136500 GGTTTACCGGAGTCCTGCTAG 59.864 57.143 9.46 0.00 0.00 3.42
2255 2278 1.188863 GGTTTACCGGAGTCCTGCTA 58.811 55.000 9.46 0.00 0.00 3.49
2256 2279 1.980844 GGTTTACCGGAGTCCTGCT 59.019 57.895 9.46 0.00 0.00 4.24
2257 2280 4.611961 GGTTTACCGGAGTCCTGC 57.388 61.111 9.46 0.00 0.00 4.85
2267 2290 1.812507 CGCTACAGCCCGGTTTACC 60.813 63.158 0.00 0.00 37.91 2.85
2268 2291 1.812507 CCGCTACAGCCCGGTTTAC 60.813 63.158 0.00 0.00 39.67 2.01
2269 2292 2.580276 CCGCTACAGCCCGGTTTA 59.420 61.111 0.00 0.00 39.67 2.01
2270 2293 4.404098 CCCGCTACAGCCCGGTTT 62.404 66.667 0.00 0.00 42.87 3.27
2274 2297 3.845259 TTAGCCCGCTACAGCCCG 61.845 66.667 0.00 0.00 37.91 6.13
2275 2298 2.203029 GTTAGCCCGCTACAGCCC 60.203 66.667 0.00 0.00 37.91 5.19
2276 2299 1.521681 CTGTTAGCCCGCTACAGCC 60.522 63.158 11.00 0.00 37.91 4.85
2277 2300 1.521681 CCTGTTAGCCCGCTACAGC 60.522 63.158 15.21 0.00 32.04 4.40
2278 2301 0.179108 GTCCTGTTAGCCCGCTACAG 60.179 60.000 14.33 14.33 32.60 2.74
2279 2302 0.613853 AGTCCTGTTAGCCCGCTACA 60.614 55.000 0.00 0.00 0.00 2.74
2280 2303 0.102663 GAGTCCTGTTAGCCCGCTAC 59.897 60.000 0.00 0.00 0.00 3.58
2281 2304 1.041447 GGAGTCCTGTTAGCCCGCTA 61.041 60.000 0.41 0.00 0.00 4.26
2282 2305 2.359967 GGAGTCCTGTTAGCCCGCT 61.360 63.158 0.41 0.00 0.00 5.52
2283 2306 2.187163 GGAGTCCTGTTAGCCCGC 59.813 66.667 0.41 0.00 0.00 6.13
2284 2307 2.494918 CGGAGTCCTGTTAGCCCG 59.505 66.667 7.77 0.00 0.00 6.13
2285 2308 0.685458 TACCGGAGTCCTGTTAGCCC 60.685 60.000 9.46 0.00 0.00 5.19
2286 2309 0.459078 GTACCGGAGTCCTGTTAGCC 59.541 60.000 9.46 0.00 0.00 3.93
2287 2310 1.404748 GAGTACCGGAGTCCTGTTAGC 59.595 57.143 9.46 3.48 0.00 3.09
2288 2311 2.719739 TGAGTACCGGAGTCCTGTTAG 58.280 52.381 9.46 0.00 0.00 2.34
2289 2312 2.885135 TGAGTACCGGAGTCCTGTTA 57.115 50.000 9.46 0.00 0.00 2.41
2290 2313 2.005370 TTGAGTACCGGAGTCCTGTT 57.995 50.000 9.46 0.00 0.00 3.16
2291 2314 1.893801 CTTTGAGTACCGGAGTCCTGT 59.106 52.381 9.46 11.33 0.00 4.00
2292 2315 1.404315 GCTTTGAGTACCGGAGTCCTG 60.404 57.143 9.46 2.81 0.00 3.86
2293 2316 0.896226 GCTTTGAGTACCGGAGTCCT 59.104 55.000 9.46 0.00 0.00 3.85
2294 2317 0.458025 CGCTTTGAGTACCGGAGTCC 60.458 60.000 9.46 0.00 0.00 3.85
2295 2318 0.243095 ACGCTTTGAGTACCGGAGTC 59.757 55.000 9.46 5.04 0.00 3.36
2296 2319 0.038526 CACGCTTTGAGTACCGGAGT 60.039 55.000 9.46 0.00 0.00 3.85
2297 2320 0.242825 TCACGCTTTGAGTACCGGAG 59.757 55.000 9.46 0.00 0.00 4.63
2298 2321 0.038892 GTCACGCTTTGAGTACCGGA 60.039 55.000 9.46 0.00 33.71 5.14
2299 2322 0.319211 TGTCACGCTTTGAGTACCGG 60.319 55.000 0.00 0.00 33.71 5.28
2300 2323 1.710013 ATGTCACGCTTTGAGTACCG 58.290 50.000 0.00 0.00 33.71 4.02
2301 2324 3.120304 GGAAATGTCACGCTTTGAGTACC 60.120 47.826 0.00 0.00 33.71 3.34
2302 2325 3.120304 GGGAAATGTCACGCTTTGAGTAC 60.120 47.826 0.00 0.00 33.71 2.73
2303 2326 3.071479 GGGAAATGTCACGCTTTGAGTA 58.929 45.455 0.00 0.00 33.71 2.59
2304 2327 1.880027 GGGAAATGTCACGCTTTGAGT 59.120 47.619 0.00 0.00 33.71 3.41
2305 2328 1.200020 GGGGAAATGTCACGCTTTGAG 59.800 52.381 0.00 0.00 33.71 3.02
2306 2329 1.243902 GGGGAAATGTCACGCTTTGA 58.756 50.000 0.00 0.00 0.00 2.69
2307 2330 0.109781 CGGGGAAATGTCACGCTTTG 60.110 55.000 0.00 0.00 0.00 2.77
2308 2331 0.250553 TCGGGGAAATGTCACGCTTT 60.251 50.000 0.00 0.00 0.00 3.51
2309 2332 0.250553 TTCGGGGAAATGTCACGCTT 60.251 50.000 0.00 0.00 0.00 4.68
2310 2333 0.673644 CTTCGGGGAAATGTCACGCT 60.674 55.000 0.00 0.00 0.00 5.07
2311 2334 1.644786 CCTTCGGGGAAATGTCACGC 61.645 60.000 0.00 0.00 37.23 5.34
2312 2335 2.466867 CCTTCGGGGAAATGTCACG 58.533 57.895 0.00 0.00 37.23 4.35
2323 2346 1.293498 CTGTGTCTGTCCCTTCGGG 59.707 63.158 0.00 0.00 46.11 5.14
2324 2347 1.185618 TCCTGTGTCTGTCCCTTCGG 61.186 60.000 0.00 0.00 0.00 4.30
2325 2348 0.679505 TTCCTGTGTCTGTCCCTTCG 59.320 55.000 0.00 0.00 0.00 3.79
2326 2349 1.605712 CGTTCCTGTGTCTGTCCCTTC 60.606 57.143 0.00 0.00 0.00 3.46
2327 2350 0.393077 CGTTCCTGTGTCTGTCCCTT 59.607 55.000 0.00 0.00 0.00 3.95
2328 2351 0.469331 TCGTTCCTGTGTCTGTCCCT 60.469 55.000 0.00 0.00 0.00 4.20
2329 2352 0.391597 TTCGTTCCTGTGTCTGTCCC 59.608 55.000 0.00 0.00 0.00 4.46
2330 2353 1.340248 TCTTCGTTCCTGTGTCTGTCC 59.660 52.381 0.00 0.00 0.00 4.02
2331 2354 2.795175 TCTTCGTTCCTGTGTCTGTC 57.205 50.000 0.00 0.00 0.00 3.51
2332 2355 2.224066 CCTTCTTCGTTCCTGTGTCTGT 60.224 50.000 0.00 0.00 0.00 3.41
2333 2356 2.035961 TCCTTCTTCGTTCCTGTGTCTG 59.964 50.000 0.00 0.00 0.00 3.51
2334 2357 2.036089 GTCCTTCTTCGTTCCTGTGTCT 59.964 50.000 0.00 0.00 0.00 3.41
2335 2358 2.223971 TGTCCTTCTTCGTTCCTGTGTC 60.224 50.000 0.00 0.00 0.00 3.67
2336 2359 1.760613 TGTCCTTCTTCGTTCCTGTGT 59.239 47.619 0.00 0.00 0.00 3.72
2337 2360 2.135933 GTGTCCTTCTTCGTTCCTGTG 58.864 52.381 0.00 0.00 0.00 3.66
2338 2361 1.760613 TGTGTCCTTCTTCGTTCCTGT 59.239 47.619 0.00 0.00 0.00 4.00
2339 2362 2.526304 TGTGTCCTTCTTCGTTCCTG 57.474 50.000 0.00 0.00 0.00 3.86
2340 2363 2.872038 GCATGTGTCCTTCTTCGTTCCT 60.872 50.000 0.00 0.00 0.00 3.36
2341 2364 1.464997 GCATGTGTCCTTCTTCGTTCC 59.535 52.381 0.00 0.00 0.00 3.62
2342 2365 1.464997 GGCATGTGTCCTTCTTCGTTC 59.535 52.381 0.00 0.00 0.00 3.95
2343 2366 1.523758 GGCATGTGTCCTTCTTCGTT 58.476 50.000 0.00 0.00 0.00 3.85
2344 2367 0.670546 CGGCATGTGTCCTTCTTCGT 60.671 55.000 0.00 0.00 0.00 3.85
2345 2368 1.361668 CCGGCATGTGTCCTTCTTCG 61.362 60.000 0.00 0.00 0.00 3.79
2346 2369 1.648467 GCCGGCATGTGTCCTTCTTC 61.648 60.000 24.80 0.00 0.00 2.87
2347 2370 1.675641 GCCGGCATGTGTCCTTCTT 60.676 57.895 24.80 0.00 0.00 2.52
2348 2371 2.045926 GCCGGCATGTGTCCTTCT 60.046 61.111 24.80 0.00 0.00 2.85
2349 2372 3.134127 GGCCGGCATGTGTCCTTC 61.134 66.667 30.85 1.84 0.00 3.46
2350 2373 3.650950 AGGCCGGCATGTGTCCTT 61.651 61.111 30.85 0.00 0.00 3.36
2351 2374 4.415150 CAGGCCGGCATGTGTCCT 62.415 66.667 32.02 13.28 0.00 3.85
2355 2378 3.993614 TTAGGCAGGCCGGCATGTG 62.994 63.158 38.10 26.86 44.47 3.21
2356 2379 3.704231 CTTAGGCAGGCCGGCATGT 62.704 63.158 38.10 24.29 44.47 3.21
2357 2380 2.903855 CTTAGGCAGGCCGGCATG 60.904 66.667 35.48 35.48 44.47 4.06
2358 2381 3.411517 ACTTAGGCAGGCCGGCAT 61.412 61.111 30.85 25.22 44.47 4.40
2359 2382 4.408821 CACTTAGGCAGGCCGGCA 62.409 66.667 30.85 7.04 44.47 5.69
2360 2383 3.920093 AACACTTAGGCAGGCCGGC 62.920 63.158 21.18 21.18 41.95 6.13
2361 2384 1.745489 GAACACTTAGGCAGGCCGG 60.745 63.158 4.37 0.00 41.95 6.13
2362 2385 1.745489 GGAACACTTAGGCAGGCCG 60.745 63.158 4.37 0.00 41.95 6.13
2363 2386 1.745489 CGGAACACTTAGGCAGGCC 60.745 63.158 0.97 0.97 0.00 5.19
2364 2387 1.745489 CCGGAACACTTAGGCAGGC 60.745 63.158 0.00 0.00 0.00 4.85
2365 2388 0.108138 CTCCGGAACACTTAGGCAGG 60.108 60.000 5.23 0.00 0.00 4.85
2366 2389 0.741221 GCTCCGGAACACTTAGGCAG 60.741 60.000 5.23 0.00 0.00 4.85
2367 2390 1.295423 GCTCCGGAACACTTAGGCA 59.705 57.895 5.23 0.00 0.00 4.75
2368 2391 0.741221 CTGCTCCGGAACACTTAGGC 60.741 60.000 5.23 2.94 0.00 3.93
2369 2392 0.608640 ACTGCTCCGGAACACTTAGG 59.391 55.000 5.23 0.00 0.00 2.69
2370 2393 2.735762 GCTACTGCTCCGGAACACTTAG 60.736 54.545 5.23 9.70 36.03 2.18
2371 2394 1.203994 GCTACTGCTCCGGAACACTTA 59.796 52.381 5.23 0.00 36.03 2.24
2372 2395 0.037232 GCTACTGCTCCGGAACACTT 60.037 55.000 5.23 0.00 36.03 3.16
2373 2396 1.185618 TGCTACTGCTCCGGAACACT 61.186 55.000 5.23 0.00 40.48 3.55
2374 2397 0.320421 TTGCTACTGCTCCGGAACAC 60.320 55.000 5.23 0.00 40.48 3.32
2375 2398 0.037326 CTTGCTACTGCTCCGGAACA 60.037 55.000 5.23 6.47 40.48 3.18
2376 2399 1.362406 GCTTGCTACTGCTCCGGAAC 61.362 60.000 5.23 0.16 40.48 3.62
2377 2400 1.079127 GCTTGCTACTGCTCCGGAA 60.079 57.895 5.23 0.00 40.48 4.30
2378 2401 0.683179 TAGCTTGCTACTGCTCCGGA 60.683 55.000 2.93 2.93 40.35 5.14
2379 2402 0.528684 GTAGCTTGCTACTGCTCCGG 60.529 60.000 21.42 0.00 40.35 5.14
2380 2403 0.528684 GGTAGCTTGCTACTGCTCCG 60.529 60.000 25.69 0.00 40.35 4.63
2381 2404 0.537188 TGGTAGCTTGCTACTGCTCC 59.463 55.000 25.69 13.70 40.35 4.70
2382 2405 1.472376 CCTGGTAGCTTGCTACTGCTC 60.472 57.143 25.69 13.69 40.35 4.26
2383 2406 0.539051 CCTGGTAGCTTGCTACTGCT 59.461 55.000 25.69 4.98 42.67 4.24
2384 2407 0.462759 CCCTGGTAGCTTGCTACTGC 60.463 60.000 25.69 14.55 40.20 4.40
2385 2408 0.462759 GCCCTGGTAGCTTGCTACTG 60.463 60.000 25.69 19.44 0.00 2.74
2386 2409 0.618968 AGCCCTGGTAGCTTGCTACT 60.619 55.000 25.69 8.07 37.24 2.57
2387 2410 0.179070 GAGCCCTGGTAGCTTGCTAC 60.179 60.000 20.79 20.79 41.75 3.58
2388 2411 1.676678 CGAGCCCTGGTAGCTTGCTA 61.677 60.000 0.00 0.00 41.75 3.49
2389 2412 2.993853 GAGCCCTGGTAGCTTGCT 59.006 61.111 0.00 0.00 41.75 3.91
2390 2413 2.512515 CGAGCCCTGGTAGCTTGC 60.513 66.667 0.00 0.00 41.75 4.01
2391 2414 2.187946 CCGAGCCCTGGTAGCTTG 59.812 66.667 0.00 5.47 41.75 4.01
2392 2415 2.284699 ACCGAGCCCTGGTAGCTT 60.285 61.111 0.00 0.00 41.75 3.74
2393 2416 3.077556 CACCGAGCCCTGGTAGCT 61.078 66.667 0.00 0.00 45.23 3.32
2394 2417 4.162690 CCACCGAGCCCTGGTAGC 62.163 72.222 0.00 0.00 37.72 3.58
2395 2418 1.961180 CTTCCACCGAGCCCTGGTAG 61.961 65.000 0.00 0.00 37.72 3.18
2396 2419 1.987855 CTTCCACCGAGCCCTGGTA 60.988 63.158 0.00 0.00 37.72 3.25
2397 2420 3.322466 CTTCCACCGAGCCCTGGT 61.322 66.667 0.00 0.00 41.47 4.00
2398 2421 4.785453 GCTTCCACCGAGCCCTGG 62.785 72.222 0.00 0.00 34.06 4.45
2399 2422 4.020617 TGCTTCCACCGAGCCCTG 62.021 66.667 0.00 0.00 39.38 4.45
2400 2423 4.021925 GTGCTTCCACCGAGCCCT 62.022 66.667 0.00 0.00 39.38 5.19
2401 2424 2.579684 CTAGTGCTTCCACCGAGCCC 62.580 65.000 0.00 0.00 43.09 5.19
2402 2425 1.153549 CTAGTGCTTCCACCGAGCC 60.154 63.158 0.00 0.00 43.09 4.70
2403 2426 1.153549 CCTAGTGCTTCCACCGAGC 60.154 63.158 0.00 0.00 43.09 5.03
2404 2427 0.457851 CTCCTAGTGCTTCCACCGAG 59.542 60.000 0.00 0.00 43.09 4.63
2405 2428 0.039180 TCTCCTAGTGCTTCCACCGA 59.961 55.000 0.00 0.00 43.09 4.69
2406 2429 0.173708 GTCTCCTAGTGCTTCCACCG 59.826 60.000 0.00 0.00 43.09 4.94
2407 2430 1.267121 TGTCTCCTAGTGCTTCCACC 58.733 55.000 0.00 0.00 43.09 4.61
2408 2431 3.618690 AATGTCTCCTAGTGCTTCCAC 57.381 47.619 0.00 0.00 42.39 4.02
2409 2432 4.207891 GAAATGTCTCCTAGTGCTTCCA 57.792 45.455 0.00 0.00 0.00 3.53


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.