Multiple sequence alignment - TraesCS3B01G498800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G498800 chr3B 100.000 4855 0 0 1 4855 742174343 742169489 0.000000e+00 8966.0
1 TraesCS3B01G498800 chr3B 89.735 302 25 5 1601 1900 742172071 742171774 9.860000e-102 381.0
2 TraesCS3B01G498800 chr3B 89.735 302 25 5 2273 2570 742172743 742172444 9.860000e-102 381.0
3 TraesCS3B01G498800 chr3B 84.974 193 26 2 4663 4854 488134345 488134535 4.960000e-45 193.0
4 TraesCS3B01G498800 chr3B 84.021 194 28 2 4663 4855 749489186 749488995 2.980000e-42 183.0
5 TraesCS3B01G498800 chr3B 95.349 43 2 0 4338 4380 106648610 106648568 8.720000e-08 69.4
6 TraesCS3B01G498800 chr3B 95.000 40 2 0 4338 4377 106655567 106655528 4.060000e-06 63.9
7 TraesCS3B01G498800 chr3D 93.195 3806 158 52 688 4404 559187614 559183821 0.000000e+00 5500.0
8 TraesCS3B01G498800 chr3D 90.868 668 52 8 1 664 522088154 522087492 0.000000e+00 887.0
9 TraesCS3B01G498800 chr3D 91.060 302 21 5 1601 1900 559185968 559185671 2.100000e-108 403.0
10 TraesCS3B01G498800 chr3D 88.816 304 26 4 2271 2568 559186650 559186349 2.760000e-97 366.0
11 TraesCS3B01G498800 chr3D 81.726 197 33 2 4659 4854 582907808 582908002 1.400000e-35 161.0
12 TraesCS3B01G498800 chr3D 81.726 197 33 2 4659 4854 582918955 582919149 1.400000e-35 161.0
13 TraesCS3B01G498800 chr3D 97.778 45 1 0 4338 4382 64202898 64202854 1.450000e-10 78.7
14 TraesCS3B01G498800 chr3A 92.791 3801 182 37 697 4421 695732404 695728620 0.000000e+00 5417.0
15 TraesCS3B01G498800 chr3A 91.722 302 19 5 1601 1900 695730777 695730480 9.720000e-112 414.0
16 TraesCS3B01G498800 chr3A 88.997 309 23 6 2268 2568 695731472 695731167 5.930000e-99 372.0
17 TraesCS3B01G498800 chr3A 89.655 145 9 2 4418 4557 695680101 695679958 3.860000e-41 180.0
18 TraesCS3B01G498800 chr3A 95.556 45 2 0 4338 4382 74433187 74433143 6.740000e-09 73.1
19 TraesCS3B01G498800 chr3A 93.023 43 3 0 4337 4379 74430294 74430252 4.060000e-06 63.9
20 TraesCS3B01G498800 chr6D 92.537 670 38 8 1 661 87469502 87468836 0.000000e+00 950.0
21 TraesCS3B01G498800 chr6D 89.925 665 55 10 1 661 452836560 452837216 0.000000e+00 846.0
22 TraesCS3B01G498800 chr6D 82.383 193 27 6 4662 4852 68087849 68088036 1.400000e-35 161.0
23 TraesCS3B01G498800 chr6D 88.095 84 6 3 4587 4666 382343529 382343612 4.000000e-16 97.1
24 TraesCS3B01G498800 chr6D 88.608 79 6 3 4593 4669 151505878 151505801 5.170000e-15 93.5
25 TraesCS3B01G498800 chr2D 92.342 666 42 8 1 662 127266046 127265386 0.000000e+00 939.0
26 TraesCS3B01G498800 chr2D 91.265 664 50 8 1 663 199858276 199858932 0.000000e+00 898.0
27 TraesCS3B01G498800 chr2D 83.889 180 26 2 4676 4854 468803816 468803993 8.360000e-38 169.0
28 TraesCS3B01G498800 chr2D 89.286 84 5 3 4587 4666 596575612 596575695 8.600000e-18 102.0
29 TraesCS3B01G498800 chr1A 92.180 665 47 4 1 662 520466112 520465450 0.000000e+00 935.0
30 TraesCS3B01G498800 chr4D 92.169 664 41 10 1 661 41721750 41722405 0.000000e+00 928.0
31 TraesCS3B01G498800 chr4D 91.994 662 47 5 1 662 381096046 381095391 0.000000e+00 924.0
32 TraesCS3B01G498800 chr4D 78.276 290 39 11 4588 4855 6680852 6680565 1.080000e-36 165.0
33 TraesCS3B01G498800 chr2A 91.278 665 49 7 1 661 507076250 507076909 0.000000e+00 898.0
34 TraesCS3B01G498800 chr7A 83.684 380 46 11 1148 1516 374006926 374006552 1.290000e-90 344.0
35 TraesCS3B01G498800 chr7A 85.965 228 22 7 1933 2155 374006262 374006040 8.120000e-58 235.0
36 TraesCS3B01G498800 chr7A 89.286 84 5 3 4587 4666 6799047 6799130 8.600000e-18 102.0
37 TraesCS3B01G498800 chr7D 83.077 195 28 4 4663 4855 227300178 227299987 6.460000e-39 172.0
38 TraesCS3B01G498800 chrUn 81.726 197 33 2 4659 4854 370989405 370989599 1.400000e-35 161.0
39 TraesCS3B01G498800 chrUn 81.726 197 33 2 4659 4854 384981638 384981444 1.400000e-35 161.0
40 TraesCS3B01G498800 chr1D 90.000 80 5 2 4587 4663 469610800 469610721 3.090000e-17 100.0
41 TraesCS3B01G498800 chr1D 88.095 84 6 3 4587 4666 418526577 418526494 4.000000e-16 97.1
42 TraesCS3B01G498800 chr4B 88.095 84 6 3 4587 4666 526721333 526721416 4.000000e-16 97.1
43 TraesCS3B01G498800 chr6B 87.952 83 6 3 4588 4666 275922451 275922369 1.440000e-15 95.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G498800 chr3B 742169489 742174343 4854 True 3242.666667 8966 93.156667 1 4855 3 chr3B.!!$R4 4854
1 TraesCS3B01G498800 chr3D 559183821 559187614 3793 True 2089.666667 5500 91.023667 688 4404 3 chr3D.!!$R3 3716
2 TraesCS3B01G498800 chr3D 522087492 522088154 662 True 887.000000 887 90.868000 1 664 1 chr3D.!!$R2 663
3 TraesCS3B01G498800 chr3A 695728620 695732404 3784 True 2067.666667 5417 91.170000 697 4421 3 chr3A.!!$R3 3724
4 TraesCS3B01G498800 chr6D 87468836 87469502 666 True 950.000000 950 92.537000 1 661 1 chr6D.!!$R1 660
5 TraesCS3B01G498800 chr6D 452836560 452837216 656 False 846.000000 846 89.925000 1 661 1 chr6D.!!$F3 660
6 TraesCS3B01G498800 chr2D 127265386 127266046 660 True 939.000000 939 92.342000 1 662 1 chr2D.!!$R1 661
7 TraesCS3B01G498800 chr2D 199858276 199858932 656 False 898.000000 898 91.265000 1 663 1 chr2D.!!$F1 662
8 TraesCS3B01G498800 chr1A 520465450 520466112 662 True 935.000000 935 92.180000 1 662 1 chr1A.!!$R1 661
9 TraesCS3B01G498800 chr4D 41721750 41722405 655 False 928.000000 928 92.169000 1 661 1 chr4D.!!$F1 660
10 TraesCS3B01G498800 chr4D 381095391 381096046 655 True 924.000000 924 91.994000 1 662 1 chr4D.!!$R2 661
11 TraesCS3B01G498800 chr2A 507076250 507076909 659 False 898.000000 898 91.278000 1 661 1 chr2A.!!$F1 660
12 TraesCS3B01G498800 chr7A 374006040 374006926 886 True 289.500000 344 84.824500 1148 2155 2 chr7A.!!$R1 1007

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
799 824 0.104120 CAACCGTCCCATCGCTGATA 59.896 55.0 0.00 0.00 0.0 2.15 F
829 855 0.170561 AACGGACGGTCAGATTCTCG 59.829 55.0 15.16 7.17 0.0 4.04 F
2180 2359 0.610232 GATGCATATCTGGTGGCCCC 60.610 60.0 0.00 0.85 0.0 5.80 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1627 1776 1.002502 GTGCCTCCACCCAGGTAAC 60.003 63.158 0.00 0.00 39.02 2.50 R
2217 2396 1.071857 ACCAGGTCTTTCCTTCGGTTC 59.928 52.381 0.00 0.00 45.67 3.62 R
4011 4201 0.461135 AAACAAAGGCAGTGCTGGTG 59.539 50.000 16.11 12.34 0.00 4.17 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
63 64 1.630244 CTTGACGCCGAGAAGCAAGG 61.630 60.000 0.00 0.00 34.00 3.61
109 110 3.721793 GCAAGCCAGGATGCTAGAT 57.278 52.632 9.81 0.00 41.80 1.98
117 118 3.360867 CCAGGATGCTAGATATCGAGGT 58.639 50.000 13.88 0.00 31.97 3.85
171 172 1.079197 TTGCGAGCATGATGACCGT 60.079 52.632 0.00 0.00 0.00 4.83
337 338 3.001902 GCATGACCACGGGAGTCGA 62.002 63.158 0.00 0.00 44.67 4.20
381 385 1.110442 CACCCCTTTTTGTGTGCTGA 58.890 50.000 0.00 0.00 0.00 4.26
453 458 3.066291 TCTGAAACCGGCATTGTATGT 57.934 42.857 0.00 0.00 0.00 2.29
455 466 2.746904 CTGAAACCGGCATTGTATGTCA 59.253 45.455 0.00 0.00 33.60 3.58
489 505 2.124570 GGCATGAGACATGGCCGT 60.125 61.111 21.83 0.00 38.48 5.68
490 506 2.182842 GGCATGAGACATGGCCGTC 61.183 63.158 21.83 0.00 38.48 4.79
611 629 1.930503 GCCGACCCAAACAAACAAAAG 59.069 47.619 0.00 0.00 0.00 2.27
664 682 4.829492 GCCCATTGGAGTTGCTCTAATAAT 59.171 41.667 3.62 0.00 39.14 1.28
665 683 5.048434 GCCCATTGGAGTTGCTCTAATAATC 60.048 44.000 3.62 0.00 39.14 1.75
666 684 6.302269 CCCATTGGAGTTGCTCTAATAATCT 58.698 40.000 3.62 0.00 39.14 2.40
667 685 6.774656 CCCATTGGAGTTGCTCTAATAATCTT 59.225 38.462 3.62 0.00 39.14 2.40
668 686 7.939039 CCCATTGGAGTTGCTCTAATAATCTTA 59.061 37.037 3.62 0.00 39.14 2.10
669 687 9.512588 CCATTGGAGTTGCTCTAATAATCTTAT 57.487 33.333 0.00 0.00 39.14 1.73
678 696 9.653287 TTGCTCTAATAATCTTATTATCACCGG 57.347 33.333 0.00 0.00 35.66 5.28
679 697 8.812972 TGCTCTAATAATCTTATTATCACCGGT 58.187 33.333 0.00 0.00 35.66 5.28
680 698 9.303537 GCTCTAATAATCTTATTATCACCGGTC 57.696 37.037 2.59 0.00 35.66 4.79
681 699 9.504710 CTCTAATAATCTTATTATCACCGGTCG 57.495 37.037 2.59 0.00 35.66 4.79
682 700 9.234827 TCTAATAATCTTATTATCACCGGTCGA 57.765 33.333 2.59 6.66 35.66 4.20
683 701 9.850628 CTAATAATCTTATTATCACCGGTCGAA 57.149 33.333 2.59 0.00 35.66 3.71
685 703 9.550406 AATAATCTTATTATCACCGGTCGAAAA 57.450 29.630 2.59 0.00 31.90 2.29
686 704 7.852971 AATCTTATTATCACCGGTCGAAAAA 57.147 32.000 2.59 5.95 0.00 1.94
727 745 5.470098 ACCGAAACGTACTACTACTTGAGAA 59.530 40.000 0.00 0.00 0.00 2.87
745 770 9.225436 ACTTGAGAAGGAATCATAGTTTTCTTC 57.775 33.333 0.00 0.00 0.00 2.87
750 775 6.301169 AGGAATCATAGTTTTCTTCGGAGT 57.699 37.500 0.00 0.00 0.00 3.85
785 810 1.067250 CAACAAAGCCACCCAACCG 59.933 57.895 0.00 0.00 0.00 4.44
786 811 1.380650 AACAAAGCCACCCAACCGT 60.381 52.632 0.00 0.00 0.00 4.83
787 812 1.388837 AACAAAGCCACCCAACCGTC 61.389 55.000 0.00 0.00 0.00 4.79
788 813 2.203437 AAAGCCACCCAACCGTCC 60.203 61.111 0.00 0.00 0.00 4.79
789 814 3.802852 AAAGCCACCCAACCGTCCC 62.803 63.158 0.00 0.00 0.00 4.46
796 821 2.819595 CCAACCGTCCCATCGCTG 60.820 66.667 0.00 0.00 0.00 5.18
799 824 0.104120 CAACCGTCCCATCGCTGATA 59.896 55.000 0.00 0.00 0.00 2.15
809 834 0.815095 ATCGCTGATACACGTGTCCA 59.185 50.000 27.16 21.90 0.00 4.02
810 835 0.599060 TCGCTGATACACGTGTCCAA 59.401 50.000 27.16 8.54 0.00 3.53
829 855 0.170561 AACGGACGGTCAGATTCTCG 59.829 55.000 15.16 7.17 0.00 4.04
862 889 3.414193 TGGATCCAGGCAGGGCTG 61.414 66.667 11.44 15.25 38.24 4.85
957 1000 4.344102 CCAGTTAGATTAGATCGAACCCCA 59.656 45.833 9.35 0.00 43.24 4.96
1090 1155 1.271217 GGTACGCTTTCTTCCCTGGTT 60.271 52.381 0.00 0.00 0.00 3.67
1110 1178 4.201861 GGTTTCTGCTCTGATTTCGATTCC 60.202 45.833 0.00 0.00 0.00 3.01
1119 1187 5.847304 TCTGATTTCGATTCCATTCGATCT 58.153 37.500 0.00 0.00 46.55 2.75
1306 1374 3.199442 TCAGGGTACAGATTCCAAGGA 57.801 47.619 0.00 0.00 0.00 3.36
1308 1376 4.111577 TCAGGGTACAGATTCCAAGGAAT 58.888 43.478 13.93 13.93 46.29 3.01
1309 1377 5.285401 TCAGGGTACAGATTCCAAGGAATA 58.715 41.667 14.01 0.00 43.98 1.75
1311 1379 4.103311 AGGGTACAGATTCCAAGGAATAGC 59.897 45.833 14.01 8.32 43.98 2.97
1312 1380 4.141482 GGGTACAGATTCCAAGGAATAGCA 60.141 45.833 14.01 0.00 43.98 3.49
1313 1381 5.059833 GGTACAGATTCCAAGGAATAGCAG 58.940 45.833 14.01 7.34 43.98 4.24
1317 1407 5.663106 ACAGATTCCAAGGAATAGCAGTAGA 59.337 40.000 14.01 0.00 43.98 2.59
1348 1438 3.460478 TTGGACTTTGGGGGTGGGC 62.460 63.158 0.00 0.00 0.00 5.36
1441 1541 4.959596 GCGGCGCAGGAGATCCTC 62.960 72.222 29.21 0.00 46.65 3.71
1530 1630 6.378564 TGTCCTGTCCTCTTCTTATTCAGTAG 59.621 42.308 0.00 0.00 0.00 2.57
1562 1688 6.971184 GTGCTAAGCGTTTGTAGATTACTCTA 59.029 38.462 0.00 0.00 32.66 2.43
1764 1918 3.505835 TGGTTGTCCCAACCTGTTC 57.494 52.632 22.68 1.58 41.50 3.18
1783 1937 6.219417 TGTTCAATTTCTTTCCTGCTTCAA 57.781 33.333 0.00 0.00 0.00 2.69
1886 2040 5.856156 TGATGCAAGTCCAAATGATGTTTT 58.144 33.333 0.00 0.00 0.00 2.43
1951 2116 3.011257 AGCTCTCTCTAGTCCCAGAGTTT 59.989 47.826 6.18 0.00 42.33 2.66
2038 2211 5.679734 ATGCCATCGCTATTCAACTTAAG 57.320 39.130 0.00 0.00 35.36 1.85
2039 2212 4.513442 TGCCATCGCTATTCAACTTAAGT 58.487 39.130 1.12 1.12 35.36 2.24
2058 2232 4.926140 AGTCTGGCTTTCTTCCAAAAAG 57.074 40.909 0.00 0.00 36.91 2.27
2063 2238 3.181466 TGGCTTTCTTCCAAAAAGAAGCC 60.181 43.478 21.30 21.30 42.52 4.35
2104 2282 7.739022 AACGTGTAATGAAATGCATAATGTG 57.261 32.000 0.00 0.00 35.78 3.21
2132 2310 7.334844 TCGTCTCTGTAACAGATTATGTCAT 57.665 36.000 0.00 0.00 43.00 3.06
2133 2311 7.772166 TCGTCTCTGTAACAGATTATGTCATT 58.228 34.615 0.00 0.00 43.00 2.57
2171 2350 7.886338 TGTAAATAGTGAGACGATGCATATCT 58.114 34.615 11.80 11.80 0.00 1.98
2180 2359 0.610232 GATGCATATCTGGTGGCCCC 60.610 60.000 0.00 0.85 0.00 5.80
2189 2368 1.619363 TGGTGGCCCCTAAGCATCT 60.619 57.895 0.00 0.00 0.00 2.90
2203 2382 1.005097 AGCATCTGATTGTTGCCTCCA 59.995 47.619 0.00 0.00 41.08 3.86
2213 2392 2.676748 TGTTGCCTCCATTTGACCTTT 58.323 42.857 0.00 0.00 0.00 3.11
2217 2396 1.202348 GCCTCCATTTGACCTTTTCCG 59.798 52.381 0.00 0.00 0.00 4.30
2249 2428 6.507023 GGAAAGACCTGGTTTTATATGCATG 58.493 40.000 10.16 0.00 35.41 4.06
2335 2514 7.068593 TGGAGGCACAGAAATAAATTATCCTTG 59.931 37.037 0.00 0.00 0.00 3.61
2369 2548 6.131544 AGTCAATTTGTTGGTGAAGTGTAC 57.868 37.500 0.00 0.00 0.00 2.90
2382 2561 5.063880 GTGAAGTGTACCCTCTCAAATGTT 58.936 41.667 0.00 0.00 0.00 2.71
2512 2691 1.135460 GCATCTGTTTTGCTGCTCCTC 60.135 52.381 0.00 0.00 37.14 3.71
2612 2791 2.016318 TGCAGAACTTATGCCGGATTG 58.984 47.619 5.05 0.00 43.18 2.67
2698 2879 3.433343 ACCATTGGATTGATGCTGACAA 58.567 40.909 10.37 0.00 0.00 3.18
2706 2887 4.025061 GGATTGATGCTGACAAGATTCGAG 60.025 45.833 0.00 0.00 0.00 4.04
2871 3052 7.202093 CCCCATGAAGATCTATTGGTTAGTGTA 60.202 40.741 14.22 0.00 0.00 2.90
3066 3247 0.035152 TGATGGCGGCTTTGACTCAT 60.035 50.000 11.43 0.00 0.00 2.90
3263 3444 2.269241 GAGCCCCCAGTTTCTCCG 59.731 66.667 0.00 0.00 0.00 4.63
3563 3747 4.389576 GGCGTGGTTTCAGCTGCG 62.390 66.667 9.47 6.83 0.00 5.18
3759 3949 4.398319 TCAGGACTCTTTTTCCAATGACC 58.602 43.478 0.00 0.00 35.33 4.02
3800 3990 1.931841 CATGTGCCTCAGAGATCAACG 59.068 52.381 0.00 0.00 0.00 4.10
3818 4008 3.193757 TCGTTGGAGGACGATCCG 58.806 61.111 0.00 0.00 46.09 4.18
3939 4129 2.989253 GCCTTGTTTGGTCCCCCG 60.989 66.667 0.00 0.00 0.00 5.73
3940 4130 2.282887 CCTTGTTTGGTCCCCCGG 60.283 66.667 0.00 0.00 0.00 5.73
4011 4201 1.172812 AAGAAGGGTGCAGCGGTTTC 61.173 55.000 10.24 13.01 0.00 2.78
4091 4281 6.273071 ACATTTGAAACTTGAAACCTGTAGC 58.727 36.000 0.00 0.00 0.00 3.58
4097 4287 2.876550 ACTTGAAACCTGTAGCGGAAAC 59.123 45.455 0.00 0.00 0.00 2.78
4114 4304 5.149273 CGGAAACAACAATCTGAACTCATG 58.851 41.667 0.00 0.00 0.00 3.07
4176 4366 9.716531 TTGTATTGATTATCATGATCTGAGTCC 57.283 33.333 12.53 0.00 37.28 3.85
4227 4418 8.085720 TCTTTCATTTTATTGCAATGTTGGTG 57.914 30.769 22.27 13.24 33.91 4.17
4282 4487 9.727627 GGAAAATACAGATGATGATCAAGTTTC 57.272 33.333 0.00 4.03 29.95 2.78
4410 4616 9.862149 AGGAACAGTTATAATAATAAACAGGGG 57.138 33.333 0.00 0.00 29.41 4.79
4411 4617 9.856162 GGAACAGTTATAATAATAAACAGGGGA 57.144 33.333 0.00 0.00 29.41 4.81
4421 4627 8.996651 AATAATAAACAGGGGATCTTGTTAGG 57.003 34.615 9.91 0.00 0.00 2.69
4422 4628 6.402981 AATAAACAGGGGATCTTGTTAGGT 57.597 37.500 9.91 1.12 0.00 3.08
4423 4629 4.741928 AAACAGGGGATCTTGTTAGGTT 57.258 40.909 9.91 0.00 0.00 3.50
4424 4630 3.721087 ACAGGGGATCTTGTTAGGTTG 57.279 47.619 0.00 0.00 0.00 3.77
4425 4631 3.256704 ACAGGGGATCTTGTTAGGTTGA 58.743 45.455 0.00 0.00 0.00 3.18
4426 4632 3.655777 ACAGGGGATCTTGTTAGGTTGAA 59.344 43.478 0.00 0.00 0.00 2.69
4427 4633 4.105697 ACAGGGGATCTTGTTAGGTTGAAA 59.894 41.667 0.00 0.00 0.00 2.69
4428 4634 5.076873 CAGGGGATCTTGTTAGGTTGAAAA 58.923 41.667 0.00 0.00 0.00 2.29
4429 4635 5.716703 CAGGGGATCTTGTTAGGTTGAAAAT 59.283 40.000 0.00 0.00 0.00 1.82
4430 4636 5.952347 AGGGGATCTTGTTAGGTTGAAAATC 59.048 40.000 0.00 0.00 0.00 2.17
4431 4637 5.127194 GGGGATCTTGTTAGGTTGAAAATCC 59.873 44.000 0.00 0.00 0.00 3.01
4432 4638 5.127194 GGGATCTTGTTAGGTTGAAAATCCC 59.873 44.000 0.00 0.00 42.10 3.85
4433 4639 5.714806 GGATCTTGTTAGGTTGAAAATCCCA 59.285 40.000 0.00 0.00 0.00 4.37
4434 4640 6.381133 GGATCTTGTTAGGTTGAAAATCCCAT 59.619 38.462 0.00 0.00 0.00 4.00
4435 4641 7.559897 GGATCTTGTTAGGTTGAAAATCCCATA 59.440 37.037 0.00 0.00 0.00 2.74
4436 4642 7.696992 TCTTGTTAGGTTGAAAATCCCATAC 57.303 36.000 0.00 0.00 0.00 2.39
4437 4643 6.373216 TCTTGTTAGGTTGAAAATCCCATACG 59.627 38.462 0.00 0.00 0.00 3.06
4438 4644 4.396790 TGTTAGGTTGAAAATCCCATACGC 59.603 41.667 0.00 0.00 0.00 4.42
4439 4645 2.375146 AGGTTGAAAATCCCATACGCC 58.625 47.619 0.00 0.00 0.00 5.68
4440 4646 1.407618 GGTTGAAAATCCCATACGCCC 59.592 52.381 0.00 0.00 0.00 6.13
4441 4647 1.407618 GTTGAAAATCCCATACGCCCC 59.592 52.381 0.00 0.00 0.00 5.80
4442 4648 0.626382 TGAAAATCCCATACGCCCCA 59.374 50.000 0.00 0.00 0.00 4.96
4443 4649 1.006043 TGAAAATCCCATACGCCCCAA 59.994 47.619 0.00 0.00 0.00 4.12
4444 4650 2.316108 GAAAATCCCATACGCCCCAAT 58.684 47.619 0.00 0.00 0.00 3.16
4445 4651 1.703411 AAATCCCATACGCCCCAATG 58.297 50.000 0.00 0.00 0.00 2.82
4446 4652 0.178964 AATCCCATACGCCCCAATGG 60.179 55.000 0.00 0.00 42.02 3.16
4447 4653 1.360393 ATCCCATACGCCCCAATGGT 61.360 55.000 0.00 0.00 40.97 3.55
4448 4654 1.076339 CCCATACGCCCCAATGGTT 60.076 57.895 0.00 0.00 40.97 3.67
4449 4655 1.106944 CCCATACGCCCCAATGGTTC 61.107 60.000 0.00 0.00 40.97 3.62
4450 4656 0.106719 CCATACGCCCCAATGGTTCT 60.107 55.000 0.00 0.00 38.28 3.01
4451 4657 1.024271 CATACGCCCCAATGGTTCTG 58.976 55.000 0.00 0.00 36.04 3.02
4452 4658 0.106719 ATACGCCCCAATGGTTCTGG 60.107 55.000 0.00 0.00 36.04 3.86
4453 4659 1.493854 TACGCCCCAATGGTTCTGGT 61.494 55.000 0.00 0.00 36.04 4.00
4454 4660 2.342650 CGCCCCAATGGTTCTGGTG 61.343 63.158 0.00 0.00 36.04 4.17
4455 4661 1.984026 GCCCCAATGGTTCTGGTGG 60.984 63.158 0.00 0.00 36.04 4.61
4456 4662 1.984026 CCCCAATGGTTCTGGTGGC 60.984 63.158 0.00 0.00 31.45 5.01
4457 4663 1.228831 CCCAATGGTTCTGGTGGCA 60.229 57.895 0.00 0.00 31.45 4.92
4458 4664 0.831288 CCCAATGGTTCTGGTGGCAA 60.831 55.000 0.00 0.00 31.45 4.52
4459 4665 1.269012 CCAATGGTTCTGGTGGCAAT 58.731 50.000 0.00 0.00 0.00 3.56
4460 4666 1.066716 CCAATGGTTCTGGTGGCAATG 60.067 52.381 0.00 0.00 0.00 2.82
4461 4667 1.066716 CAATGGTTCTGGTGGCAATGG 60.067 52.381 0.00 0.00 0.00 3.16
4462 4668 0.615544 ATGGTTCTGGTGGCAATGGG 60.616 55.000 0.00 0.00 0.00 4.00
4463 4669 1.228862 GGTTCTGGTGGCAATGGGT 60.229 57.895 0.00 0.00 0.00 4.51
4464 4670 0.831711 GGTTCTGGTGGCAATGGGTT 60.832 55.000 0.00 0.00 0.00 4.11
4465 4671 0.318120 GTTCTGGTGGCAATGGGTTG 59.682 55.000 0.00 0.00 38.39 3.77
4466 4672 0.105760 TTCTGGTGGCAATGGGTTGT 60.106 50.000 0.00 0.00 37.65 3.32
4467 4673 0.105760 TCTGGTGGCAATGGGTTGTT 60.106 50.000 0.00 0.00 37.65 2.83
4468 4674 0.318120 CTGGTGGCAATGGGTTGTTC 59.682 55.000 0.00 0.00 37.65 3.18
4469 4675 1.118356 TGGTGGCAATGGGTTGTTCC 61.118 55.000 0.00 0.00 37.65 3.62
4482 4688 3.882444 GGTTGTTCCCAGTCTTATACCC 58.118 50.000 0.00 0.00 0.00 3.69
4483 4689 3.371273 GGTTGTTCCCAGTCTTATACCCC 60.371 52.174 0.00 0.00 0.00 4.95
4484 4690 3.208570 TGTTCCCAGTCTTATACCCCA 57.791 47.619 0.00 0.00 0.00 4.96
4485 4691 3.533146 TGTTCCCAGTCTTATACCCCAA 58.467 45.455 0.00 0.00 0.00 4.12
4486 4692 3.521937 TGTTCCCAGTCTTATACCCCAAG 59.478 47.826 0.00 0.00 0.00 3.61
4487 4693 3.778629 GTTCCCAGTCTTATACCCCAAGA 59.221 47.826 0.00 0.00 0.00 3.02
4488 4694 4.083080 TCCCAGTCTTATACCCCAAGAA 57.917 45.455 0.00 0.00 33.95 2.52
4489 4695 3.778629 TCCCAGTCTTATACCCCAAGAAC 59.221 47.826 0.00 0.00 33.95 3.01
4490 4696 3.118000 CCCAGTCTTATACCCCAAGAACC 60.118 52.174 0.00 0.00 33.95 3.62
4491 4697 3.521937 CCAGTCTTATACCCCAAGAACCA 59.478 47.826 0.00 0.00 33.95 3.67
4492 4698 4.018779 CCAGTCTTATACCCCAAGAACCAA 60.019 45.833 0.00 0.00 33.95 3.67
4493 4699 5.515886 CCAGTCTTATACCCCAAGAACCAAA 60.516 44.000 0.00 0.00 33.95 3.28
4494 4700 6.187682 CAGTCTTATACCCCAAGAACCAAAT 58.812 40.000 0.00 0.00 33.95 2.32
4495 4701 6.095440 CAGTCTTATACCCCAAGAACCAAATG 59.905 42.308 0.00 0.00 33.95 2.32
4496 4702 4.953579 TCTTATACCCCAAGAACCAAATGC 59.046 41.667 0.00 0.00 0.00 3.56
4497 4703 2.685106 TACCCCAAGAACCAAATGCA 57.315 45.000 0.00 0.00 0.00 3.96
4498 4704 1.799933 ACCCCAAGAACCAAATGCAA 58.200 45.000 0.00 0.00 0.00 4.08
4499 4705 1.693606 ACCCCAAGAACCAAATGCAAG 59.306 47.619 0.00 0.00 0.00 4.01
4500 4706 1.969923 CCCCAAGAACCAAATGCAAGA 59.030 47.619 0.00 0.00 0.00 3.02
4501 4707 2.368221 CCCCAAGAACCAAATGCAAGAA 59.632 45.455 0.00 0.00 0.00 2.52
4502 4708 3.555586 CCCCAAGAACCAAATGCAAGAAG 60.556 47.826 0.00 0.00 0.00 2.85
4503 4709 3.070015 CCCAAGAACCAAATGCAAGAAGT 59.930 43.478 0.00 0.00 0.00 3.01
4504 4710 4.443315 CCCAAGAACCAAATGCAAGAAGTT 60.443 41.667 0.00 0.00 0.00 2.66
4505 4711 4.508861 CCAAGAACCAAATGCAAGAAGTTG 59.491 41.667 0.00 0.00 36.67 3.16
4506 4712 4.326504 AGAACCAAATGCAAGAAGTTGG 57.673 40.909 5.75 5.75 45.02 3.77
4507 4713 3.070015 AGAACCAAATGCAAGAAGTTGGG 59.930 43.478 11.61 5.43 44.01 4.12
4508 4714 1.693606 ACCAAATGCAAGAAGTTGGGG 59.306 47.619 11.61 4.65 44.01 4.96
4509 4715 1.002315 CCAAATGCAAGAAGTTGGGGG 59.998 52.381 0.00 0.00 37.46 5.40
4510 4716 1.969923 CAAATGCAAGAAGTTGGGGGA 59.030 47.619 0.00 0.00 33.87 4.81
4511 4717 2.368221 CAAATGCAAGAAGTTGGGGGAA 59.632 45.455 0.00 0.00 33.87 3.97
4512 4718 2.397044 ATGCAAGAAGTTGGGGGAAA 57.603 45.000 0.00 0.00 33.87 3.13
4513 4719 2.397044 TGCAAGAAGTTGGGGGAAAT 57.603 45.000 0.00 0.00 33.87 2.17
4514 4720 1.969923 TGCAAGAAGTTGGGGGAAATG 59.030 47.619 0.00 0.00 33.87 2.32
4515 4721 1.970640 GCAAGAAGTTGGGGGAAATGT 59.029 47.619 0.00 0.00 33.87 2.71
4516 4722 2.029020 GCAAGAAGTTGGGGGAAATGTC 60.029 50.000 0.00 0.00 33.87 3.06
4517 4723 3.230134 CAAGAAGTTGGGGGAAATGTCA 58.770 45.455 0.00 0.00 0.00 3.58
4518 4724 3.611025 AGAAGTTGGGGGAAATGTCAA 57.389 42.857 0.00 0.00 0.00 3.18
4519 4725 3.922375 AGAAGTTGGGGGAAATGTCAAA 58.078 40.909 0.00 0.00 0.00 2.69
4520 4726 3.641436 AGAAGTTGGGGGAAATGTCAAAC 59.359 43.478 0.00 0.00 0.00 2.93
4521 4727 3.039252 AGTTGGGGGAAATGTCAAACA 57.961 42.857 0.00 0.00 0.00 2.83
4522 4728 2.965147 AGTTGGGGGAAATGTCAAACAG 59.035 45.455 0.00 0.00 0.00 3.16
4523 4729 2.962421 GTTGGGGGAAATGTCAAACAGA 59.038 45.455 0.00 0.00 0.00 3.41
4524 4730 2.875296 TGGGGGAAATGTCAAACAGAG 58.125 47.619 0.00 0.00 0.00 3.35
4525 4731 2.171003 GGGGGAAATGTCAAACAGAGG 58.829 52.381 0.00 0.00 0.00 3.69
4526 4732 2.225017 GGGGGAAATGTCAAACAGAGGA 60.225 50.000 0.00 0.00 0.00 3.71
4527 4733 3.564352 GGGGGAAATGTCAAACAGAGGAT 60.564 47.826 0.00 0.00 0.00 3.24
4528 4734 3.696548 GGGGAAATGTCAAACAGAGGATC 59.303 47.826 0.00 0.00 0.00 3.36
4545 4751 6.591313 GAGGATCTCGTTAGGTTCAAAATC 57.409 41.667 0.00 0.00 0.00 2.17
4546 4752 6.049955 AGGATCTCGTTAGGTTCAAAATCA 57.950 37.500 0.00 0.00 0.00 2.57
4547 4753 5.875359 AGGATCTCGTTAGGTTCAAAATCAC 59.125 40.000 0.00 0.00 0.00 3.06
4548 4754 5.220416 GGATCTCGTTAGGTTCAAAATCACG 60.220 44.000 0.00 0.00 0.00 4.35
4549 4755 3.430895 TCTCGTTAGGTTCAAAATCACGC 59.569 43.478 0.00 0.00 0.00 5.34
4550 4756 3.132160 TCGTTAGGTTCAAAATCACGCA 58.868 40.909 0.00 0.00 0.00 5.24
4551 4757 3.749088 TCGTTAGGTTCAAAATCACGCAT 59.251 39.130 0.00 0.00 0.00 4.73
4552 4758 4.930405 TCGTTAGGTTCAAAATCACGCATA 59.070 37.500 0.00 0.00 0.00 3.14
4553 4759 5.408909 TCGTTAGGTTCAAAATCACGCATAA 59.591 36.000 0.00 0.00 0.00 1.90
4554 4760 6.073167 TCGTTAGGTTCAAAATCACGCATAAA 60.073 34.615 0.00 0.00 0.00 1.40
4555 4761 6.745450 CGTTAGGTTCAAAATCACGCATAAAT 59.255 34.615 0.00 0.00 0.00 1.40
4556 4762 7.906010 CGTTAGGTTCAAAATCACGCATAAATA 59.094 33.333 0.00 0.00 0.00 1.40
4557 4763 9.221775 GTTAGGTTCAAAATCACGCATAAATAG 57.778 33.333 0.00 0.00 0.00 1.73
4558 4764 7.624360 AGGTTCAAAATCACGCATAAATAGA 57.376 32.000 0.00 0.00 0.00 1.98
4559 4765 7.697691 AGGTTCAAAATCACGCATAAATAGAG 58.302 34.615 0.00 0.00 0.00 2.43
4560 4766 6.414987 GGTTCAAAATCACGCATAAATAGAGC 59.585 38.462 0.00 0.00 0.00 4.09
4561 4767 6.925610 TCAAAATCACGCATAAATAGAGCT 57.074 33.333 0.00 0.00 0.00 4.09
4562 4768 7.320443 TCAAAATCACGCATAAATAGAGCTT 57.680 32.000 0.00 0.00 0.00 3.74
4563 4769 7.409697 TCAAAATCACGCATAAATAGAGCTTC 58.590 34.615 0.00 0.00 0.00 3.86
4564 4770 5.931441 AATCACGCATAAATAGAGCTTCC 57.069 39.130 0.00 0.00 0.00 3.46
4565 4771 3.728845 TCACGCATAAATAGAGCTTCCC 58.271 45.455 0.00 0.00 0.00 3.97
4566 4772 3.388024 TCACGCATAAATAGAGCTTCCCT 59.612 43.478 0.00 0.00 0.00 4.20
4567 4773 3.743396 CACGCATAAATAGAGCTTCCCTC 59.257 47.826 0.00 0.00 41.07 4.30
4568 4774 3.388024 ACGCATAAATAGAGCTTCCCTCA 59.612 43.478 0.00 0.00 43.31 3.86
4569 4775 4.040952 ACGCATAAATAGAGCTTCCCTCAT 59.959 41.667 0.00 0.00 43.31 2.90
4570 4776 5.246203 ACGCATAAATAGAGCTTCCCTCATA 59.754 40.000 0.00 0.00 43.31 2.15
4571 4777 5.809562 CGCATAAATAGAGCTTCCCTCATAG 59.190 44.000 0.00 0.00 43.31 2.23
4572 4778 6.350528 CGCATAAATAGAGCTTCCCTCATAGA 60.351 42.308 0.00 0.00 43.31 1.98
4573 4779 7.390027 GCATAAATAGAGCTTCCCTCATAGAA 58.610 38.462 0.00 0.00 43.31 2.10
4574 4780 7.333174 GCATAAATAGAGCTTCCCTCATAGAAC 59.667 40.741 0.00 0.00 43.31 3.01
4575 4781 6.814954 AAATAGAGCTTCCCTCATAGAACA 57.185 37.500 0.00 0.00 43.31 3.18
4576 4782 6.814954 AATAGAGCTTCCCTCATAGAACAA 57.185 37.500 0.00 0.00 43.31 2.83
4577 4783 4.751767 AGAGCTTCCCTCATAGAACAAG 57.248 45.455 0.00 0.00 43.31 3.16
4578 4784 3.118445 AGAGCTTCCCTCATAGAACAAGC 60.118 47.826 0.00 0.00 43.31 4.01
4579 4785 1.936547 GCTTCCCTCATAGAACAAGCG 59.063 52.381 0.00 0.00 0.00 4.68
4580 4786 2.555199 CTTCCCTCATAGAACAAGCGG 58.445 52.381 0.00 0.00 0.00 5.52
4581 4787 1.568504 TCCCTCATAGAACAAGCGGT 58.431 50.000 0.00 0.00 0.00 5.68
4582 4788 1.906574 TCCCTCATAGAACAAGCGGTT 59.093 47.619 0.00 0.00 44.10 4.44
4583 4789 3.101437 TCCCTCATAGAACAAGCGGTTA 58.899 45.455 0.00 0.00 40.63 2.85
4584 4790 3.709653 TCCCTCATAGAACAAGCGGTTAT 59.290 43.478 0.00 0.00 40.63 1.89
4585 4791 4.163458 TCCCTCATAGAACAAGCGGTTATT 59.837 41.667 0.00 0.00 40.63 1.40
4586 4792 4.511826 CCCTCATAGAACAAGCGGTTATTC 59.488 45.833 10.27 10.27 40.63 1.75
4587 4793 4.511826 CCTCATAGAACAAGCGGTTATTCC 59.488 45.833 14.30 0.00 40.63 3.01
4588 4794 5.353394 TCATAGAACAAGCGGTTATTCCT 57.647 39.130 14.30 5.38 40.63 3.36
4589 4795 5.741011 TCATAGAACAAGCGGTTATTCCTT 58.259 37.500 14.30 0.38 40.63 3.36
4590 4796 6.177610 TCATAGAACAAGCGGTTATTCCTTT 58.822 36.000 14.30 0.00 40.63 3.11
4591 4797 4.766404 AGAACAAGCGGTTATTCCTTTG 57.234 40.909 14.30 0.00 40.63 2.77
4592 4798 4.142038 AGAACAAGCGGTTATTCCTTTGT 58.858 39.130 14.30 0.00 40.63 2.83
4593 4799 4.215613 AGAACAAGCGGTTATTCCTTTGTC 59.784 41.667 14.30 0.00 40.63 3.18
4594 4800 3.751518 ACAAGCGGTTATTCCTTTGTCT 58.248 40.909 0.00 0.00 37.19 3.41
4595 4801 3.751698 ACAAGCGGTTATTCCTTTGTCTC 59.248 43.478 0.00 0.00 37.19 3.36
4596 4802 3.983044 AGCGGTTATTCCTTTGTCTCT 57.017 42.857 0.00 0.00 0.00 3.10
4597 4803 4.287766 AGCGGTTATTCCTTTGTCTCTT 57.712 40.909 0.00 0.00 0.00 2.85
4598 4804 4.254492 AGCGGTTATTCCTTTGTCTCTTC 58.746 43.478 0.00 0.00 0.00 2.87
4599 4805 4.000988 GCGGTTATTCCTTTGTCTCTTCA 58.999 43.478 0.00 0.00 0.00 3.02
4600 4806 4.454504 GCGGTTATTCCTTTGTCTCTTCAA 59.545 41.667 0.00 0.00 0.00 2.69
4601 4807 5.390991 GCGGTTATTCCTTTGTCTCTTCAAG 60.391 44.000 0.00 0.00 0.00 3.02
4602 4808 5.932303 CGGTTATTCCTTTGTCTCTTCAAGA 59.068 40.000 0.00 0.00 0.00 3.02
4603 4809 6.426937 CGGTTATTCCTTTGTCTCTTCAAGAA 59.573 38.462 0.00 0.00 35.21 2.52
4604 4810 7.041372 CGGTTATTCCTTTGTCTCTTCAAGAAA 60.041 37.037 0.00 0.00 35.21 2.52
4605 4811 8.630037 GGTTATTCCTTTGTCTCTTCAAGAAAA 58.370 33.333 0.00 0.00 35.21 2.29
4606 4812 9.670719 GTTATTCCTTTGTCTCTTCAAGAAAAG 57.329 33.333 3.82 3.82 32.67 2.27
4607 4813 6.699575 TTCCTTTGTCTCTTCAAGAAAAGG 57.300 37.500 17.96 17.96 44.00 3.11
4608 4814 4.580580 TCCTTTGTCTCTTCAAGAAAAGGC 59.419 41.667 18.80 0.00 43.32 4.35
4609 4815 4.531332 CTTTGTCTCTTCAAGAAAAGGCG 58.469 43.478 3.06 0.00 32.67 5.52
4610 4816 2.494059 TGTCTCTTCAAGAAAAGGCGG 58.506 47.619 0.00 0.00 35.21 6.13
4611 4817 1.197949 GTCTCTTCAAGAAAAGGCGGC 59.802 52.381 0.00 0.00 35.21 6.53
4612 4818 1.072331 TCTCTTCAAGAAAAGGCGGCT 59.928 47.619 5.25 5.25 0.00 5.52
4613 4819 2.301870 TCTCTTCAAGAAAAGGCGGCTA 59.698 45.455 13.71 0.00 0.00 3.93
4614 4820 2.675348 CTCTTCAAGAAAAGGCGGCTAG 59.325 50.000 13.71 2.94 0.00 3.42
4615 4821 1.740025 CTTCAAGAAAAGGCGGCTAGG 59.260 52.381 13.71 0.00 0.00 3.02
4616 4822 0.035439 TCAAGAAAAGGCGGCTAGGG 60.035 55.000 13.71 0.00 0.00 3.53
4617 4823 0.322546 CAAGAAAAGGCGGCTAGGGT 60.323 55.000 13.71 0.00 0.00 4.34
4618 4824 0.404426 AAGAAAAGGCGGCTAGGGTT 59.596 50.000 13.71 4.23 0.00 4.11
4619 4825 0.404426 AGAAAAGGCGGCTAGGGTTT 59.596 50.000 13.71 9.24 0.00 3.27
4620 4826 0.809385 GAAAAGGCGGCTAGGGTTTC 59.191 55.000 13.71 14.79 0.00 2.78
4621 4827 0.404426 AAAAGGCGGCTAGGGTTTCT 59.596 50.000 13.71 0.00 0.00 2.52
4622 4828 0.322546 AAAGGCGGCTAGGGTTTCTG 60.323 55.000 13.71 0.00 0.00 3.02
4623 4829 2.821679 AAGGCGGCTAGGGTTTCTGC 62.822 60.000 13.71 0.00 0.00 4.26
4624 4830 2.824489 GCGGCTAGGGTTTCTGCC 60.824 66.667 0.00 0.00 41.76 4.85
4625 4831 2.990479 CGGCTAGGGTTTCTGCCT 59.010 61.111 0.00 0.00 42.90 4.75
4626 4832 1.153349 CGGCTAGGGTTTCTGCCTC 60.153 63.158 0.00 0.00 42.90 4.70
4627 4833 1.224870 GGCTAGGGTTTCTGCCTCC 59.775 63.158 0.00 0.00 41.92 4.30
4628 4834 1.224870 GCTAGGGTTTCTGCCTCCC 59.775 63.158 0.00 0.00 41.36 4.30
4629 4835 1.522569 CTAGGGTTTCTGCCTCCCG 59.477 63.158 0.00 0.00 45.27 5.14
4630 4836 1.229400 TAGGGTTTCTGCCTCCCGT 60.229 57.895 0.00 0.00 45.27 5.28
4631 4837 1.262640 TAGGGTTTCTGCCTCCCGTC 61.263 60.000 0.00 0.00 45.27 4.79
4632 4838 2.434359 GGTTTCTGCCTCCCGTCG 60.434 66.667 0.00 0.00 0.00 5.12
4633 4839 2.434359 GTTTCTGCCTCCCGTCGG 60.434 66.667 3.60 3.60 0.00 4.79
4634 4840 2.920912 TTTCTGCCTCCCGTCGGT 60.921 61.111 11.06 0.00 0.00 4.69
4635 4841 3.234630 TTTCTGCCTCCCGTCGGTG 62.235 63.158 11.06 1.77 0.00 4.94
4655 4861 4.796231 GCCGTCGATCTGCCACGT 62.796 66.667 0.00 0.00 0.00 4.49
4656 4862 2.579787 CCGTCGATCTGCCACGTC 60.580 66.667 0.00 0.00 0.00 4.34
4657 4863 2.485582 CGTCGATCTGCCACGTCT 59.514 61.111 0.00 0.00 0.00 4.18
4658 4864 1.154016 CGTCGATCTGCCACGTCTT 60.154 57.895 0.00 0.00 0.00 3.01
4659 4865 1.134530 CGTCGATCTGCCACGTCTTC 61.135 60.000 0.00 0.00 0.00 2.87
4660 4866 0.171455 GTCGATCTGCCACGTCTTCT 59.829 55.000 0.00 0.00 0.00 2.85
4661 4867 0.171231 TCGATCTGCCACGTCTTCTG 59.829 55.000 0.00 0.00 0.00 3.02
4662 4868 0.803768 CGATCTGCCACGTCTTCTGG 60.804 60.000 0.00 0.00 0.00 3.86
4663 4869 0.460987 GATCTGCCACGTCTTCTGGG 60.461 60.000 0.00 0.00 0.00 4.45
4664 4870 2.527951 ATCTGCCACGTCTTCTGGGC 62.528 60.000 5.43 5.43 46.58 5.36
4665 4871 4.329545 TGCCACGTCTTCTGGGCC 62.330 66.667 9.58 0.00 45.83 5.80
4667 4873 3.322466 CCACGTCTTCTGGGCCCT 61.322 66.667 25.70 0.00 0.00 5.19
4668 4874 2.750350 CACGTCTTCTGGGCCCTT 59.250 61.111 25.70 0.00 0.00 3.95
4669 4875 1.672356 CACGTCTTCTGGGCCCTTG 60.672 63.158 25.70 16.24 0.00 3.61
4670 4876 2.747855 CGTCTTCTGGGCCCTTGC 60.748 66.667 25.70 6.32 0.00 4.01
4671 4877 2.759795 GTCTTCTGGGCCCTTGCT 59.240 61.111 25.70 0.00 37.74 3.91
4672 4878 1.676967 GTCTTCTGGGCCCTTGCTG 60.677 63.158 25.70 9.63 37.74 4.41
4673 4879 1.847506 TCTTCTGGGCCCTTGCTGA 60.848 57.895 25.70 11.95 37.74 4.26
4674 4880 1.676967 CTTCTGGGCCCTTGCTGAC 60.677 63.158 25.70 0.00 37.74 3.51
4675 4881 3.551496 TTCTGGGCCCTTGCTGACG 62.551 63.158 25.70 1.04 37.74 4.35
4679 4885 4.785453 GGCCCTTGCTGACGGGAG 62.785 72.222 0.00 0.00 43.44 4.30
4680 4886 4.785453 GCCCTTGCTGACGGGAGG 62.785 72.222 0.00 0.00 43.44 4.30
4681 4887 4.101448 CCCTTGCTGACGGGAGGG 62.101 72.222 0.00 0.00 43.44 4.30
4682 4888 4.785453 CCTTGCTGACGGGAGGGC 62.785 72.222 0.00 0.00 0.00 5.19
4683 4889 3.710722 CTTGCTGACGGGAGGGCT 61.711 66.667 0.00 0.00 0.00 5.19
4684 4890 3.672295 CTTGCTGACGGGAGGGCTC 62.672 68.421 0.00 0.00 0.00 4.70
4696 4902 2.044123 GAGGGCTCCATTTGTAGGTG 57.956 55.000 0.00 0.00 0.00 4.00
4697 4903 1.282157 GAGGGCTCCATTTGTAGGTGT 59.718 52.381 0.00 0.00 0.00 4.16
4698 4904 1.710809 AGGGCTCCATTTGTAGGTGTT 59.289 47.619 0.00 0.00 0.00 3.32
4699 4905 2.110011 AGGGCTCCATTTGTAGGTGTTT 59.890 45.455 0.00 0.00 0.00 2.83
4700 4906 2.492088 GGGCTCCATTTGTAGGTGTTTC 59.508 50.000 0.00 0.00 0.00 2.78
4701 4907 3.421844 GGCTCCATTTGTAGGTGTTTCT 58.578 45.455 0.00 0.00 0.00 2.52
4702 4908 3.826729 GGCTCCATTTGTAGGTGTTTCTT 59.173 43.478 0.00 0.00 0.00 2.52
4703 4909 4.082733 GGCTCCATTTGTAGGTGTTTCTTC 60.083 45.833 0.00 0.00 0.00 2.87
4704 4910 4.518970 GCTCCATTTGTAGGTGTTTCTTCA 59.481 41.667 0.00 0.00 0.00 3.02
4705 4911 5.009610 GCTCCATTTGTAGGTGTTTCTTCAA 59.990 40.000 0.00 0.00 0.00 2.69
4706 4912 6.633500 TCCATTTGTAGGTGTTTCTTCAAG 57.367 37.500 0.00 0.00 0.00 3.02
4707 4913 6.126409 TCCATTTGTAGGTGTTTCTTCAAGT 58.874 36.000 0.00 0.00 0.00 3.16
4708 4914 6.605594 TCCATTTGTAGGTGTTTCTTCAAGTT 59.394 34.615 0.00 0.00 0.00 2.66
4709 4915 7.123547 TCCATTTGTAGGTGTTTCTTCAAGTTT 59.876 33.333 0.00 0.00 0.00 2.66
4710 4916 7.763985 CCATTTGTAGGTGTTTCTTCAAGTTTT 59.236 33.333 0.00 0.00 0.00 2.43
4711 4917 8.594687 CATTTGTAGGTGTTTCTTCAAGTTTTG 58.405 33.333 0.00 0.00 0.00 2.44
4712 4918 6.827586 TGTAGGTGTTTCTTCAAGTTTTGT 57.172 33.333 0.00 0.00 0.00 2.83
4713 4919 7.222000 TGTAGGTGTTTCTTCAAGTTTTGTT 57.778 32.000 0.00 0.00 0.00 2.83
4714 4920 8.338072 TGTAGGTGTTTCTTCAAGTTTTGTTA 57.662 30.769 0.00 0.00 0.00 2.41
4715 4921 8.455682 TGTAGGTGTTTCTTCAAGTTTTGTTAG 58.544 33.333 0.00 0.00 0.00 2.34
4716 4922 7.696992 AGGTGTTTCTTCAAGTTTTGTTAGA 57.303 32.000 0.00 0.00 0.00 2.10
4717 4923 7.762382 AGGTGTTTCTTCAAGTTTTGTTAGAG 58.238 34.615 0.00 0.00 0.00 2.43
4718 4924 7.393515 AGGTGTTTCTTCAAGTTTTGTTAGAGT 59.606 33.333 0.00 0.00 0.00 3.24
4719 4925 8.027189 GGTGTTTCTTCAAGTTTTGTTAGAGTT 58.973 33.333 0.00 0.00 0.00 3.01
4720 4926 9.406828 GTGTTTCTTCAAGTTTTGTTAGAGTTT 57.593 29.630 0.00 0.00 0.00 2.66
4726 4932 9.665264 CTTCAAGTTTTGTTAGAGTTTATGTCC 57.335 33.333 0.00 0.00 0.00 4.02
4727 4933 8.974060 TCAAGTTTTGTTAGAGTTTATGTCCT 57.026 30.769 0.00 0.00 0.00 3.85
4728 4934 8.836413 TCAAGTTTTGTTAGAGTTTATGTCCTG 58.164 33.333 0.00 0.00 0.00 3.86
4729 4935 7.203255 AGTTTTGTTAGAGTTTATGTCCTGC 57.797 36.000 0.00 0.00 0.00 4.85
4730 4936 6.998673 AGTTTTGTTAGAGTTTATGTCCTGCT 59.001 34.615 0.00 0.00 0.00 4.24
4731 4937 7.173390 AGTTTTGTTAGAGTTTATGTCCTGCTC 59.827 37.037 0.00 0.00 0.00 4.26
4732 4938 5.738619 TGTTAGAGTTTATGTCCTGCTCA 57.261 39.130 0.00 0.00 0.00 4.26
4733 4939 5.724328 TGTTAGAGTTTATGTCCTGCTCAG 58.276 41.667 0.00 0.00 0.00 3.35
4744 4950 3.712020 CTGCTCAGGAAGACGAGTC 57.288 57.895 0.00 0.00 0.00 3.36
4745 4951 1.173043 CTGCTCAGGAAGACGAGTCT 58.827 55.000 0.00 0.00 42.75 3.24
4746 4952 0.884514 TGCTCAGGAAGACGAGTCTG 59.115 55.000 6.51 0.00 40.36 3.51
4747 4953 0.457681 GCTCAGGAAGACGAGTCTGC 60.458 60.000 6.51 4.49 40.36 4.26
4748 4954 0.884514 CTCAGGAAGACGAGTCTGCA 59.115 55.000 12.83 0.00 40.36 4.41
4749 4955 1.270826 CTCAGGAAGACGAGTCTGCAA 59.729 52.381 12.83 0.00 40.36 4.08
4750 4956 1.000163 TCAGGAAGACGAGTCTGCAAC 60.000 52.381 12.83 0.00 40.36 4.17
4751 4957 0.039074 AGGAAGACGAGTCTGCAACG 60.039 55.000 12.83 0.00 40.36 4.10
4752 4958 1.009389 GGAAGACGAGTCTGCAACGG 61.009 60.000 12.83 0.00 40.36 4.44
4753 4959 1.618640 GAAGACGAGTCTGCAACGGC 61.619 60.000 6.51 0.00 40.36 5.68
4754 4960 2.049063 GACGAGTCTGCAACGGCT 60.049 61.111 0.00 0.00 41.91 5.52
4755 4961 1.664965 GACGAGTCTGCAACGGCTT 60.665 57.895 0.00 0.00 41.91 4.35
4756 4962 1.222115 GACGAGTCTGCAACGGCTTT 61.222 55.000 0.00 0.00 41.91 3.51
4757 4963 0.814010 ACGAGTCTGCAACGGCTTTT 60.814 50.000 0.00 0.00 41.91 2.27
4758 4964 0.110644 CGAGTCTGCAACGGCTTTTC 60.111 55.000 0.00 0.00 41.91 2.29
4759 4965 1.230324 GAGTCTGCAACGGCTTTTCT 58.770 50.000 0.00 0.00 41.91 2.52
4760 4966 1.604278 GAGTCTGCAACGGCTTTTCTT 59.396 47.619 0.00 0.00 41.91 2.52
4761 4967 1.334869 AGTCTGCAACGGCTTTTCTTG 59.665 47.619 0.00 0.00 41.91 3.02
4762 4968 1.333619 GTCTGCAACGGCTTTTCTTGA 59.666 47.619 0.00 0.00 41.91 3.02
4763 4969 2.020720 TCTGCAACGGCTTTTCTTGAA 58.979 42.857 0.00 0.00 41.91 2.69
4764 4970 2.033299 TCTGCAACGGCTTTTCTTGAAG 59.967 45.455 0.00 0.00 41.91 3.02
4775 4981 5.405797 GCTTTTCTTGAAGCTGGAATAAGG 58.594 41.667 2.57 0.00 46.55 2.69
4776 4982 5.047731 GCTTTTCTTGAAGCTGGAATAAGGT 60.048 40.000 2.57 0.00 46.55 3.50
4777 4983 6.517362 GCTTTTCTTGAAGCTGGAATAAGGTT 60.517 38.462 2.57 0.00 46.55 3.50
4782 4988 3.546724 GAAGCTGGAATAAGGTTCTCCC 58.453 50.000 8.48 0.00 46.40 4.30
4783 4989 1.847088 AGCTGGAATAAGGTTCTCCCC 59.153 52.381 0.00 0.00 0.00 4.81
4784 4990 1.564348 GCTGGAATAAGGTTCTCCCCA 59.436 52.381 0.00 0.00 0.00 4.96
4785 4991 2.684038 GCTGGAATAAGGTTCTCCCCAC 60.684 54.545 0.00 0.00 0.00 4.61
4786 4992 1.920351 TGGAATAAGGTTCTCCCCACC 59.080 52.381 0.00 0.00 34.06 4.61
4788 4994 3.246572 TGGAATAAGGTTCTCCCCACCTA 60.247 47.826 0.00 0.00 44.48 3.08
4789 4995 3.391626 GGAATAAGGTTCTCCCCACCTAG 59.608 52.174 0.00 0.00 44.48 3.02
4790 4996 1.875488 TAAGGTTCTCCCCACCTAGC 58.125 55.000 0.00 0.00 44.48 3.42
4791 4997 0.914902 AAGGTTCTCCCCACCTAGCC 60.915 60.000 0.00 0.00 44.48 3.93
4792 4998 2.376165 GGTTCTCCCCACCTAGCCC 61.376 68.421 0.00 0.00 0.00 5.19
4793 4999 2.042261 TTCTCCCCACCTAGCCCC 59.958 66.667 0.00 0.00 0.00 5.80
4794 5000 3.995809 TTCTCCCCACCTAGCCCCG 62.996 68.421 0.00 0.00 0.00 5.73
4795 5001 4.798682 CTCCCCACCTAGCCCCGT 62.799 72.222 0.00 0.00 0.00 5.28
4796 5002 4.791069 TCCCCACCTAGCCCCGTC 62.791 72.222 0.00 0.00 0.00 4.79
4810 5016 4.636435 CGTCCCGGTGGTGCCTTT 62.636 66.667 0.00 0.00 34.25 3.11
4811 5017 2.751688 GTCCCGGTGGTGCCTTTA 59.248 61.111 0.00 0.00 34.25 1.85
4812 5018 1.376812 GTCCCGGTGGTGCCTTTAG 60.377 63.158 0.00 0.00 34.25 1.85
4813 5019 2.750237 CCCGGTGGTGCCTTTAGC 60.750 66.667 0.00 0.00 44.14 3.09
4822 5028 4.827481 GCCTTTAGCATCGTCGGA 57.173 55.556 0.00 0.00 42.97 4.55
4823 5029 2.594541 GCCTTTAGCATCGTCGGAG 58.405 57.895 0.00 0.00 42.97 4.63
4824 5030 0.876342 GCCTTTAGCATCGTCGGAGG 60.876 60.000 0.00 0.00 42.97 4.30
4825 5031 0.249489 CCTTTAGCATCGTCGGAGGG 60.249 60.000 0.00 0.00 0.00 4.30
4826 5032 0.876342 CTTTAGCATCGTCGGAGGGC 60.876 60.000 0.00 0.00 0.00 5.19
4827 5033 2.622903 TTTAGCATCGTCGGAGGGCG 62.623 60.000 0.00 0.00 33.15 6.13
4830 5036 4.129737 CATCGTCGGAGGGCGTGT 62.130 66.667 0.00 0.00 0.00 4.49
4831 5037 2.438975 ATCGTCGGAGGGCGTGTA 60.439 61.111 0.00 0.00 0.00 2.90
4832 5038 2.478890 ATCGTCGGAGGGCGTGTAG 61.479 63.158 0.00 0.00 0.00 2.74
4833 5039 2.881539 ATCGTCGGAGGGCGTGTAGA 62.882 60.000 0.00 0.00 0.00 2.59
4834 5040 2.799371 GTCGGAGGGCGTGTAGAG 59.201 66.667 0.00 0.00 0.00 2.43
4835 5041 2.439701 TCGGAGGGCGTGTAGAGG 60.440 66.667 0.00 0.00 0.00 3.69
4836 5042 2.754658 CGGAGGGCGTGTAGAGGT 60.755 66.667 0.00 0.00 0.00 3.85
4837 5043 2.893398 GGAGGGCGTGTAGAGGTG 59.107 66.667 0.00 0.00 0.00 4.00
4838 5044 1.982938 GGAGGGCGTGTAGAGGTGT 60.983 63.158 0.00 0.00 0.00 4.16
4839 5045 1.215647 GAGGGCGTGTAGAGGTGTG 59.784 63.158 0.00 0.00 0.00 3.82
4840 5046 1.533273 AGGGCGTGTAGAGGTGTGT 60.533 57.895 0.00 0.00 0.00 3.72
4841 5047 1.080025 GGGCGTGTAGAGGTGTGTC 60.080 63.158 0.00 0.00 0.00 3.67
4842 5048 1.533469 GGGCGTGTAGAGGTGTGTCT 61.533 60.000 0.00 0.00 0.00 3.41
4843 5049 0.109226 GGCGTGTAGAGGTGTGTCTC 60.109 60.000 0.00 0.00 0.00 3.36
4844 5050 0.109226 GCGTGTAGAGGTGTGTCTCC 60.109 60.000 0.00 0.00 34.46 3.71
4845 5051 0.168348 CGTGTAGAGGTGTGTCTCCG 59.832 60.000 0.00 0.00 34.46 4.63
4846 5052 1.531423 GTGTAGAGGTGTGTCTCCGA 58.469 55.000 0.00 0.00 34.46 4.55
4847 5053 1.199558 GTGTAGAGGTGTGTCTCCGAC 59.800 57.143 0.00 0.00 34.46 4.79
4848 5054 0.447011 GTAGAGGTGTGTCTCCGACG 59.553 60.000 0.00 0.00 34.95 5.12
4849 5055 0.675837 TAGAGGTGTGTCTCCGACGG 60.676 60.000 7.84 7.84 34.95 4.79
4850 5056 1.970114 GAGGTGTGTCTCCGACGGA 60.970 63.158 17.28 17.28 34.95 4.69
4851 5057 1.304217 AGGTGTGTCTCCGACGGAT 60.304 57.895 18.71 0.00 34.95 4.18
4852 5058 1.139095 GGTGTGTCTCCGACGGATC 59.861 63.158 18.71 13.99 34.95 3.36
4853 5059 1.313812 GGTGTGTCTCCGACGGATCT 61.314 60.000 18.71 0.00 34.95 2.75
4854 5060 0.099082 GTGTGTCTCCGACGGATCTC 59.901 60.000 18.71 14.20 34.95 2.75
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
63 64 3.036026 TCGAGCTCGAACATCTTGC 57.964 52.632 35.16 0.00 46.30 4.01
99 100 2.223386 GCGACCTCGATATCTAGCATCC 60.223 54.545 0.34 0.00 43.02 3.51
109 110 2.103538 GCGTTGGCGACCTCGATA 59.896 61.111 6.38 0.00 43.02 2.92
117 118 3.758973 TTGGTCTTGGCGTTGGCGA 62.759 57.895 0.00 0.00 41.24 5.54
171 172 1.561076 CCACCTTCATGATCTCCACCA 59.439 52.381 0.00 0.00 0.00 4.17
334 335 2.337246 TTCGACCACGCCATCTCGA 61.337 57.895 0.00 0.00 39.58 4.04
337 338 1.215647 GAGTTCGACCACGCCATCT 59.784 57.895 0.00 0.00 39.58 2.90
690 708 8.931385 AGTACGTTTCGGTGTGTTAATAATAT 57.069 30.769 0.00 0.00 0.00 1.28
691 709 9.284594 GTAGTACGTTTCGGTGTGTTAATAATA 57.715 33.333 0.00 0.00 0.00 0.98
692 710 8.028938 AGTAGTACGTTTCGGTGTGTTAATAAT 58.971 33.333 0.00 0.00 0.00 1.28
727 745 6.070767 TCACTCCGAAGAAAACTATGATTCCT 60.071 38.462 0.00 0.00 0.00 3.36
745 770 0.319555 TCGGACTTTGCTTCACTCCG 60.320 55.000 0.00 0.00 44.35 4.63
750 775 2.210116 GTTGTCTCGGACTTTGCTTCA 58.790 47.619 5.77 0.00 33.15 3.02
763 788 1.067060 GTTGGGTGGCTTTGTTGTCTC 59.933 52.381 0.00 0.00 0.00 3.36
785 810 0.102481 ACGTGTATCAGCGATGGGAC 59.898 55.000 0.00 0.00 0.00 4.46
786 811 0.102300 CACGTGTATCAGCGATGGGA 59.898 55.000 7.58 0.00 0.00 4.37
787 812 0.179111 ACACGTGTATCAGCGATGGG 60.179 55.000 21.98 0.00 0.00 4.00
788 813 1.200483 GACACGTGTATCAGCGATGG 58.800 55.000 23.44 0.00 0.00 3.51
789 814 1.200483 GGACACGTGTATCAGCGATG 58.800 55.000 23.44 0.00 0.00 3.84
796 821 2.068837 TCCGTTTGGACACGTGTATC 57.931 50.000 23.44 17.12 40.17 2.24
809 834 1.402456 CGAGAATCTGACCGTCCGTTT 60.402 52.381 0.00 0.00 0.00 3.60
810 835 0.170561 CGAGAATCTGACCGTCCGTT 59.829 55.000 0.00 0.00 0.00 4.44
1090 1155 4.206477 TGGAATCGAAATCAGAGCAGAA 57.794 40.909 0.00 0.00 0.00 3.02
1119 1187 2.358957 CGCCAATCAGATCAGGAAACA 58.641 47.619 6.11 0.00 0.00 2.83
1306 1374 6.386284 AGAACCTAATCCCTCTACTGCTATT 58.614 40.000 0.00 0.00 0.00 1.73
1308 1376 5.405063 AGAACCTAATCCCTCTACTGCTA 57.595 43.478 0.00 0.00 0.00 3.49
1309 1377 4.273300 AGAACCTAATCCCTCTACTGCT 57.727 45.455 0.00 0.00 0.00 4.24
1311 1379 4.962995 TCCAAGAACCTAATCCCTCTACTG 59.037 45.833 0.00 0.00 0.00 2.74
1312 1380 4.963628 GTCCAAGAACCTAATCCCTCTACT 59.036 45.833 0.00 0.00 0.00 2.57
1313 1381 4.963628 AGTCCAAGAACCTAATCCCTCTAC 59.036 45.833 0.00 0.00 0.00 2.59
1317 1407 4.263949 CCAAAGTCCAAGAACCTAATCCCT 60.264 45.833 0.00 0.00 0.00 4.20
1348 1438 4.559300 GCAATTAATCATCAATCCCCACCG 60.559 45.833 0.00 0.00 0.00 4.94
1530 1630 2.097466 ACAAACGCTTAGCACATATGGC 59.903 45.455 7.80 7.80 0.00 4.40
1585 1711 2.868583 CCCAAAGCATCGTCTCAGTATG 59.131 50.000 0.00 0.00 37.54 2.39
1589 1718 1.066573 AGACCCAAAGCATCGTCTCAG 60.067 52.381 0.00 0.00 29.62 3.35
1625 1774 3.390419 GTGCCTCCACCCAGGTAACTC 62.390 61.905 0.00 0.00 39.91 3.01
1626 1775 1.489560 GTGCCTCCACCCAGGTAACT 61.490 60.000 0.00 0.00 41.80 2.24
1627 1776 1.002502 GTGCCTCCACCCAGGTAAC 60.003 63.158 0.00 0.00 39.02 2.50
1630 1784 2.930562 GAGTGCCTCCACCCAGGT 60.931 66.667 0.00 0.00 43.09 4.00
1764 1918 5.458041 TCCTTGAAGCAGGAAAGAAATTG 57.542 39.130 0.00 0.00 40.26 2.32
1910 2065 7.016072 AGAGAGCTATAAGTTCAGTATGCCAAT 59.984 37.037 0.00 0.00 34.76 3.16
1951 2116 2.571212 CACTAACAACAGACTTGGGCA 58.429 47.619 0.00 0.00 0.00 5.36
2023 2196 4.184629 AGCCAGACTTAAGTTGAATAGCG 58.815 43.478 10.02 0.00 0.00 4.26
2038 2211 4.918810 TCTTTTTGGAAGAAAGCCAGAC 57.081 40.909 0.00 0.00 36.64 3.51
2039 2212 4.202151 GCTTCTTTTTGGAAGAAAGCCAGA 60.202 41.667 8.20 0.00 43.70 3.86
2063 2238 3.000122 CACGTTTGAAACAAAGCACATGG 60.000 43.478 8.93 0.00 0.00 3.66
2104 2282 7.251994 ACATAATCTGTTACAGAGACGAACTC 58.748 38.462 20.12 0.00 44.08 3.01
2155 2333 2.036346 CCACCAGATATGCATCGTCTCA 59.964 50.000 0.19 0.00 36.20 3.27
2171 2350 1.619363 AGATGCTTAGGGGCCACCA 60.619 57.895 0.00 0.00 43.89 4.17
2180 2359 3.314635 GGAGGCAACAATCAGATGCTTAG 59.685 47.826 0.00 0.00 44.63 2.18
2189 2368 2.562298 GGTCAAATGGAGGCAACAATCA 59.438 45.455 0.00 0.00 41.41 2.57
2203 2382 2.853705 TCGGTTCGGAAAAGGTCAAAT 58.146 42.857 0.00 0.00 0.00 2.32
2213 2392 1.270465 GGTCTTTCCTTCGGTTCGGAA 60.270 52.381 0.00 0.00 37.52 4.30
2217 2396 1.071857 ACCAGGTCTTTCCTTCGGTTC 59.928 52.381 0.00 0.00 45.67 3.62
2335 2514 9.128107 CACCAACAAATTGACTAAACACATATC 57.872 33.333 0.00 0.00 38.15 1.63
2340 2519 7.009174 CACTTCACCAACAAATTGACTAAACAC 59.991 37.037 0.00 0.00 38.15 3.32
2342 2521 7.033185 ACACTTCACCAACAAATTGACTAAAC 58.967 34.615 0.00 0.00 38.15 2.01
2343 2522 7.164230 ACACTTCACCAACAAATTGACTAAA 57.836 32.000 0.00 0.00 38.15 1.85
2347 2526 5.278604 GGTACACTTCACCAACAAATTGAC 58.721 41.667 0.00 0.00 38.15 3.18
2369 2548 5.943416 TGTATAACCACAACATTTGAGAGGG 59.057 40.000 0.00 0.00 0.00 4.30
2382 2561 5.190925 AGCCTATGGAAACTGTATAACCACA 59.809 40.000 0.00 0.00 33.38 4.17
2512 2691 1.522668 TCAGGCAAATCTGAACACCG 58.477 50.000 0.00 0.00 40.43 4.94
2612 2791 2.032071 CCTGACGGTTGACCCCAC 59.968 66.667 0.00 0.00 0.00 4.61
2672 2853 4.098349 TCAGCATCAATCCAATGGTTAAGC 59.902 41.667 0.00 0.00 32.78 3.09
2698 2879 5.536538 TCTGCATAGGTATTGACTCGAATCT 59.463 40.000 0.00 0.00 0.00 2.40
2706 2887 9.277783 AGTTCAATTATCTGCATAGGTATTGAC 57.722 33.333 9.51 6.86 31.50 3.18
3066 3247 1.146774 TGGGACTTCAGGCAAATCCAA 59.853 47.619 0.00 0.00 37.29 3.53
3248 3429 3.860930 TTGCGGAGAAACTGGGGGC 62.861 63.158 0.00 0.00 0.00 5.80
3263 3444 0.604578 TCCTTGGCTGAGCAAATTGC 59.395 50.000 10.41 10.41 45.46 3.56
3563 3747 1.978542 CTGAATCAGCAGCTGTTTGC 58.021 50.000 21.16 10.56 44.41 3.68
3759 3949 0.947244 GATGGCGCATAACCCTCAAG 59.053 55.000 10.83 0.00 0.00 3.02
3818 4008 1.954035 AGAGGTTGGGGTAGGAGAAC 58.046 55.000 0.00 0.00 0.00 3.01
3939 4129 3.502356 TCCAAGAAATACCCAAACACCC 58.498 45.455 0.00 0.00 0.00 4.61
3940 4130 4.403734 TCTCCAAGAAATACCCAAACACC 58.596 43.478 0.00 0.00 0.00 4.16
4011 4201 0.461135 AAACAAAGGCAGTGCTGGTG 59.539 50.000 16.11 12.34 0.00 4.17
4091 4281 4.811555 TGAGTTCAGATTGTTGTTTCCG 57.188 40.909 0.00 0.00 0.00 4.30
4097 4287 8.763049 TCTAACTACATGAGTTCAGATTGTTG 57.237 34.615 12.05 2.00 45.81 3.33
4155 4345 5.305386 ACCGGACTCAGATCATGATAATCAA 59.695 40.000 9.46 0.00 37.28 2.57
4176 4366 8.488651 AATAGTTACCAGATAAAGTTTCACCG 57.511 34.615 0.00 0.00 0.00 4.94
4224 4415 4.802563 GGCTAGTAAAACACGAGTATCACC 59.197 45.833 0.00 0.00 32.80 4.02
4227 4418 7.592439 AAAAGGCTAGTAAAACACGAGTATC 57.408 36.000 0.00 0.00 32.80 2.24
4282 4487 5.065731 GGTGAGTGAGATATTGCAGGAAAAG 59.934 44.000 0.00 0.00 0.00 2.27
4410 4616 6.834168 TGGGATTTTCAACCTAACAAGATC 57.166 37.500 0.00 0.00 0.00 2.75
4411 4617 7.067008 CGTATGGGATTTTCAACCTAACAAGAT 59.933 37.037 0.00 0.00 0.00 2.40
4421 4627 1.407618 GGGGCGTATGGGATTTTCAAC 59.592 52.381 0.00 0.00 0.00 3.18
4422 4628 1.006043 TGGGGCGTATGGGATTTTCAA 59.994 47.619 0.00 0.00 0.00 2.69
4423 4629 0.626382 TGGGGCGTATGGGATTTTCA 59.374 50.000 0.00 0.00 0.00 2.69
4424 4630 1.770294 TTGGGGCGTATGGGATTTTC 58.230 50.000 0.00 0.00 0.00 2.29
4425 4631 2.038659 CATTGGGGCGTATGGGATTTT 58.961 47.619 0.00 0.00 0.00 1.82
4426 4632 1.703411 CATTGGGGCGTATGGGATTT 58.297 50.000 0.00 0.00 0.00 2.17
4427 4633 0.178964 CCATTGGGGCGTATGGGATT 60.179 55.000 0.00 0.00 38.10 3.01
4428 4634 1.360393 ACCATTGGGGCGTATGGGAT 61.360 55.000 7.78 0.00 44.53 3.85
4429 4635 1.576368 AACCATTGGGGCGTATGGGA 61.576 55.000 7.78 0.00 44.53 4.37
4430 4636 1.076339 AACCATTGGGGCGTATGGG 60.076 57.895 7.78 0.00 44.53 4.00
4431 4637 0.106719 AGAACCATTGGGGCGTATGG 60.107 55.000 7.78 8.93 45.49 2.74
4432 4638 1.024271 CAGAACCATTGGGGCGTATG 58.976 55.000 7.78 0.00 42.05 2.39
4433 4639 0.106719 CCAGAACCATTGGGGCGTAT 60.107 55.000 7.78 0.00 42.05 3.06
4434 4640 1.301623 CCAGAACCATTGGGGCGTA 59.698 57.895 7.78 0.00 42.05 4.42
4435 4641 2.035626 CCAGAACCATTGGGGCGT 59.964 61.111 7.78 0.00 42.05 5.68
4436 4642 2.035626 ACCAGAACCATTGGGGCG 59.964 61.111 7.78 0.00 42.05 6.13
4437 4643 1.984026 CCACCAGAACCATTGGGGC 60.984 63.158 7.78 0.00 42.05 5.80
4438 4644 1.984026 GCCACCAGAACCATTGGGG 60.984 63.158 7.78 0.73 40.11 4.96
4439 4645 0.831288 TTGCCACCAGAACCATTGGG 60.831 55.000 7.78 0.00 40.11 4.12
4440 4646 1.066716 CATTGCCACCAGAACCATTGG 60.067 52.381 0.00 0.00 41.60 3.16
4441 4647 1.066716 CCATTGCCACCAGAACCATTG 60.067 52.381 0.00 0.00 0.00 2.82
4442 4648 1.269012 CCATTGCCACCAGAACCATT 58.731 50.000 0.00 0.00 0.00 3.16
4443 4649 0.615544 CCCATTGCCACCAGAACCAT 60.616 55.000 0.00 0.00 0.00 3.55
4444 4650 1.228831 CCCATTGCCACCAGAACCA 60.229 57.895 0.00 0.00 0.00 3.67
4445 4651 0.831711 AACCCATTGCCACCAGAACC 60.832 55.000 0.00 0.00 0.00 3.62
4446 4652 0.318120 CAACCCATTGCCACCAGAAC 59.682 55.000 0.00 0.00 0.00 3.01
4447 4653 0.105760 ACAACCCATTGCCACCAGAA 60.106 50.000 0.00 0.00 39.66 3.02
4448 4654 0.105760 AACAACCCATTGCCACCAGA 60.106 50.000 0.00 0.00 39.66 3.86
4449 4655 0.318120 GAACAACCCATTGCCACCAG 59.682 55.000 0.00 0.00 39.66 4.00
4450 4656 1.118356 GGAACAACCCATTGCCACCA 61.118 55.000 0.00 0.00 39.66 4.17
4451 4657 1.671166 GGAACAACCCATTGCCACC 59.329 57.895 0.00 0.00 39.66 4.61
4461 4667 3.371273 GGGGTATAAGACTGGGAACAACC 60.371 52.174 0.00 0.00 42.06 3.77
4462 4668 3.264964 TGGGGTATAAGACTGGGAACAAC 59.735 47.826 0.00 0.00 42.06 3.32
4463 4669 3.533146 TGGGGTATAAGACTGGGAACAA 58.467 45.455 0.00 0.00 42.06 2.83
4464 4670 3.208570 TGGGGTATAAGACTGGGAACA 57.791 47.619 0.00 0.00 39.59 3.18
4465 4671 3.778629 TCTTGGGGTATAAGACTGGGAAC 59.221 47.826 0.00 0.00 29.68 3.62
4466 4672 4.083080 TCTTGGGGTATAAGACTGGGAA 57.917 45.455 0.00 0.00 29.68 3.97
4467 4673 3.778629 GTTCTTGGGGTATAAGACTGGGA 59.221 47.826 0.00 0.00 34.14 4.37
4468 4674 3.118000 GGTTCTTGGGGTATAAGACTGGG 60.118 52.174 0.00 0.00 34.14 4.45
4469 4675 3.521937 TGGTTCTTGGGGTATAAGACTGG 59.478 47.826 0.00 0.00 34.14 4.00
4470 4676 4.837093 TGGTTCTTGGGGTATAAGACTG 57.163 45.455 0.00 0.00 34.14 3.51
4471 4677 5.853572 TTTGGTTCTTGGGGTATAAGACT 57.146 39.130 0.00 0.00 34.14 3.24
4472 4678 5.163550 GCATTTGGTTCTTGGGGTATAAGAC 60.164 44.000 0.00 0.00 34.14 3.01
4473 4679 4.953579 GCATTTGGTTCTTGGGGTATAAGA 59.046 41.667 0.00 0.00 32.64 2.10
4474 4680 4.709397 TGCATTTGGTTCTTGGGGTATAAG 59.291 41.667 0.00 0.00 0.00 1.73
4475 4681 4.678256 TGCATTTGGTTCTTGGGGTATAA 58.322 39.130 0.00 0.00 0.00 0.98
4476 4682 4.323569 TGCATTTGGTTCTTGGGGTATA 57.676 40.909 0.00 0.00 0.00 1.47
4477 4683 3.182887 TGCATTTGGTTCTTGGGGTAT 57.817 42.857 0.00 0.00 0.00 2.73
4478 4684 2.685106 TGCATTTGGTTCTTGGGGTA 57.315 45.000 0.00 0.00 0.00 3.69
4479 4685 1.693606 CTTGCATTTGGTTCTTGGGGT 59.306 47.619 0.00 0.00 0.00 4.95
4480 4686 1.969923 TCTTGCATTTGGTTCTTGGGG 59.030 47.619 0.00 0.00 0.00 4.96
4481 4687 3.070015 ACTTCTTGCATTTGGTTCTTGGG 59.930 43.478 0.00 0.00 0.00 4.12
4482 4688 4.326504 ACTTCTTGCATTTGGTTCTTGG 57.673 40.909 0.00 0.00 0.00 3.61
4483 4689 4.508861 CCAACTTCTTGCATTTGGTTCTTG 59.491 41.667 0.00 0.00 34.86 3.02
4484 4690 4.443315 CCCAACTTCTTGCATTTGGTTCTT 60.443 41.667 0.00 0.00 37.41 2.52
4485 4691 3.070015 CCCAACTTCTTGCATTTGGTTCT 59.930 43.478 0.00 0.00 37.41 3.01
4486 4692 3.392882 CCCAACTTCTTGCATTTGGTTC 58.607 45.455 0.00 0.00 37.41 3.62
4487 4693 2.104622 CCCCAACTTCTTGCATTTGGTT 59.895 45.455 0.00 0.00 37.41 3.67
4488 4694 1.693606 CCCCAACTTCTTGCATTTGGT 59.306 47.619 0.00 0.00 37.41 3.67
4489 4695 1.002315 CCCCCAACTTCTTGCATTTGG 59.998 52.381 0.00 0.00 38.62 3.28
4490 4696 1.969923 TCCCCCAACTTCTTGCATTTG 59.030 47.619 0.00 0.00 0.00 2.32
4491 4697 2.397044 TCCCCCAACTTCTTGCATTT 57.603 45.000 0.00 0.00 0.00 2.32
4492 4698 2.397044 TTCCCCCAACTTCTTGCATT 57.603 45.000 0.00 0.00 0.00 3.56
4493 4699 2.397044 TTTCCCCCAACTTCTTGCAT 57.603 45.000 0.00 0.00 0.00 3.96
4494 4700 1.969923 CATTTCCCCCAACTTCTTGCA 59.030 47.619 0.00 0.00 0.00 4.08
4495 4701 1.970640 ACATTTCCCCCAACTTCTTGC 59.029 47.619 0.00 0.00 0.00 4.01
4496 4702 3.230134 TGACATTTCCCCCAACTTCTTG 58.770 45.455 0.00 0.00 0.00 3.02
4497 4703 3.611025 TGACATTTCCCCCAACTTCTT 57.389 42.857 0.00 0.00 0.00 2.52
4498 4704 3.611025 TTGACATTTCCCCCAACTTCT 57.389 42.857 0.00 0.00 0.00 2.85
4499 4705 3.386402 TGTTTGACATTTCCCCCAACTTC 59.614 43.478 0.00 0.00 0.00 3.01
4500 4706 3.379452 TGTTTGACATTTCCCCCAACTT 58.621 40.909 0.00 0.00 0.00 2.66
4501 4707 2.965147 CTGTTTGACATTTCCCCCAACT 59.035 45.455 0.00 0.00 0.00 3.16
4502 4708 2.962421 TCTGTTTGACATTTCCCCCAAC 59.038 45.455 0.00 0.00 0.00 3.77
4503 4709 3.230134 CTCTGTTTGACATTTCCCCCAA 58.770 45.455 0.00 0.00 0.00 4.12
4504 4710 2.490718 CCTCTGTTTGACATTTCCCCCA 60.491 50.000 0.00 0.00 0.00 4.96
4505 4711 2.171003 CCTCTGTTTGACATTTCCCCC 58.829 52.381 0.00 0.00 0.00 5.40
4506 4712 3.154827 TCCTCTGTTTGACATTTCCCC 57.845 47.619 0.00 0.00 0.00 4.81
4507 4713 4.593956 AGATCCTCTGTTTGACATTTCCC 58.406 43.478 0.00 0.00 0.00 3.97
4508 4714 4.331168 CGAGATCCTCTGTTTGACATTTCC 59.669 45.833 0.00 0.00 0.00 3.13
4509 4715 4.932200 ACGAGATCCTCTGTTTGACATTTC 59.068 41.667 0.00 0.00 0.00 2.17
4510 4716 4.899502 ACGAGATCCTCTGTTTGACATTT 58.100 39.130 0.00 0.00 0.00 2.32
4511 4717 4.543590 ACGAGATCCTCTGTTTGACATT 57.456 40.909 0.00 0.00 0.00 2.71
4512 4718 4.543590 AACGAGATCCTCTGTTTGACAT 57.456 40.909 0.00 0.00 28.77 3.06
4513 4719 4.082190 CCTAACGAGATCCTCTGTTTGACA 60.082 45.833 0.00 0.00 32.77 3.58
4514 4720 4.082136 ACCTAACGAGATCCTCTGTTTGAC 60.082 45.833 0.00 0.00 32.77 3.18
4515 4721 4.087182 ACCTAACGAGATCCTCTGTTTGA 58.913 43.478 0.00 0.00 32.77 2.69
4516 4722 4.457834 ACCTAACGAGATCCTCTGTTTG 57.542 45.455 0.00 0.00 32.77 2.93
4517 4723 4.527038 TGAACCTAACGAGATCCTCTGTTT 59.473 41.667 0.00 0.00 32.77 2.83
4518 4724 4.087182 TGAACCTAACGAGATCCTCTGTT 58.913 43.478 0.00 0.00 34.08 3.16
4519 4725 3.698289 TGAACCTAACGAGATCCTCTGT 58.302 45.455 0.00 0.00 0.00 3.41
4520 4726 4.720649 TTGAACCTAACGAGATCCTCTG 57.279 45.455 0.00 0.00 0.00 3.35
4521 4727 5.740290 TTTTGAACCTAACGAGATCCTCT 57.260 39.130 0.00 0.00 0.00 3.69
4522 4728 6.036191 GTGATTTTGAACCTAACGAGATCCTC 59.964 42.308 0.00 0.00 0.00 3.71
4523 4729 5.875359 GTGATTTTGAACCTAACGAGATCCT 59.125 40.000 0.00 0.00 0.00 3.24
4524 4730 5.220416 CGTGATTTTGAACCTAACGAGATCC 60.220 44.000 0.00 0.00 0.00 3.36
4525 4731 5.724223 GCGTGATTTTGAACCTAACGAGATC 60.724 44.000 0.00 0.00 0.00 2.75
4526 4732 4.092968 GCGTGATTTTGAACCTAACGAGAT 59.907 41.667 0.00 0.00 0.00 2.75
4527 4733 3.430895 GCGTGATTTTGAACCTAACGAGA 59.569 43.478 0.00 0.00 0.00 4.04
4528 4734 3.185594 TGCGTGATTTTGAACCTAACGAG 59.814 43.478 0.00 0.00 0.00 4.18
4529 4735 3.132160 TGCGTGATTTTGAACCTAACGA 58.868 40.909 0.00 0.00 0.00 3.85
4530 4736 3.529634 TGCGTGATTTTGAACCTAACG 57.470 42.857 0.00 0.00 0.00 3.18
4531 4737 9.221775 CTATTTATGCGTGATTTTGAACCTAAC 57.778 33.333 0.00 0.00 0.00 2.34
4532 4738 9.168451 TCTATTTATGCGTGATTTTGAACCTAA 57.832 29.630 0.00 0.00 0.00 2.69
4533 4739 8.725405 TCTATTTATGCGTGATTTTGAACCTA 57.275 30.769 0.00 0.00 0.00 3.08
4534 4740 7.624360 TCTATTTATGCGTGATTTTGAACCT 57.376 32.000 0.00 0.00 0.00 3.50
4535 4741 6.414987 GCTCTATTTATGCGTGATTTTGAACC 59.585 38.462 0.00 0.00 0.00 3.62
4536 4742 7.189512 AGCTCTATTTATGCGTGATTTTGAAC 58.810 34.615 0.00 0.00 0.00 3.18
4537 4743 7.320443 AGCTCTATTTATGCGTGATTTTGAA 57.680 32.000 0.00 0.00 0.00 2.69
4538 4744 6.925610 AGCTCTATTTATGCGTGATTTTGA 57.074 33.333 0.00 0.00 0.00 2.69
4539 4745 6.634436 GGAAGCTCTATTTATGCGTGATTTTG 59.366 38.462 0.00 0.00 0.00 2.44
4540 4746 6.238759 GGGAAGCTCTATTTATGCGTGATTTT 60.239 38.462 0.00 0.00 0.00 1.82
4541 4747 5.239525 GGGAAGCTCTATTTATGCGTGATTT 59.760 40.000 0.00 0.00 0.00 2.17
4542 4748 4.757149 GGGAAGCTCTATTTATGCGTGATT 59.243 41.667 0.00 0.00 0.00 2.57
4543 4749 4.040952 AGGGAAGCTCTATTTATGCGTGAT 59.959 41.667 0.00 0.00 0.00 3.06
4544 4750 3.388024 AGGGAAGCTCTATTTATGCGTGA 59.612 43.478 0.00 0.00 0.00 4.35
4545 4751 3.733337 AGGGAAGCTCTATTTATGCGTG 58.267 45.455 0.00 0.00 0.00 5.34
4546 4752 3.388024 TGAGGGAAGCTCTATTTATGCGT 59.612 43.478 0.00 0.00 0.00 5.24
4547 4753 3.995199 TGAGGGAAGCTCTATTTATGCG 58.005 45.455 0.00 0.00 0.00 4.73
4548 4754 6.940739 TCTATGAGGGAAGCTCTATTTATGC 58.059 40.000 0.00 0.00 0.00 3.14
4549 4755 8.370940 TGTTCTATGAGGGAAGCTCTATTTATG 58.629 37.037 0.00 0.00 0.00 1.90
4550 4756 8.497910 TGTTCTATGAGGGAAGCTCTATTTAT 57.502 34.615 0.00 0.00 0.00 1.40
4551 4757 7.914427 TGTTCTATGAGGGAAGCTCTATTTA 57.086 36.000 0.00 0.00 0.00 1.40
4552 4758 6.814954 TGTTCTATGAGGGAAGCTCTATTT 57.185 37.500 0.00 0.00 0.00 1.40
4553 4759 6.687647 GCTTGTTCTATGAGGGAAGCTCTATT 60.688 42.308 0.00 0.00 34.34 1.73
4554 4760 5.221621 GCTTGTTCTATGAGGGAAGCTCTAT 60.222 44.000 0.00 0.00 34.34 1.98
4555 4761 4.100189 GCTTGTTCTATGAGGGAAGCTCTA 59.900 45.833 0.00 0.00 34.34 2.43
4556 4762 3.118445 GCTTGTTCTATGAGGGAAGCTCT 60.118 47.826 0.00 0.00 34.34 4.09
4557 4763 3.202097 GCTTGTTCTATGAGGGAAGCTC 58.798 50.000 0.00 0.00 34.34 4.09
4558 4764 2.419297 CGCTTGTTCTATGAGGGAAGCT 60.419 50.000 0.00 0.00 34.88 3.74
4559 4765 1.936547 CGCTTGTTCTATGAGGGAAGC 59.063 52.381 0.00 0.00 33.92 3.86
4560 4766 2.093447 ACCGCTTGTTCTATGAGGGAAG 60.093 50.000 0.00 0.00 0.00 3.46
4561 4767 1.906574 ACCGCTTGTTCTATGAGGGAA 59.093 47.619 0.00 0.00 0.00 3.97
4562 4768 1.568504 ACCGCTTGTTCTATGAGGGA 58.431 50.000 0.00 0.00 0.00 4.20
4563 4769 2.403252 AACCGCTTGTTCTATGAGGG 57.597 50.000 0.00 0.00 28.45 4.30
4564 4770 4.511826 GGAATAACCGCTTGTTCTATGAGG 59.488 45.833 0.80 0.00 38.42 3.86
4565 4771 5.360591 AGGAATAACCGCTTGTTCTATGAG 58.639 41.667 0.80 0.00 44.74 2.90
4566 4772 5.353394 AGGAATAACCGCTTGTTCTATGA 57.647 39.130 0.80 0.00 44.74 2.15
4567 4773 6.128007 ACAAAGGAATAACCGCTTGTTCTATG 60.128 38.462 0.00 1.32 42.57 2.23
4568 4774 5.944007 ACAAAGGAATAACCGCTTGTTCTAT 59.056 36.000 0.00 0.00 42.57 1.98
4569 4775 5.310451 ACAAAGGAATAACCGCTTGTTCTA 58.690 37.500 0.00 0.00 42.57 2.10
4570 4776 4.142038 ACAAAGGAATAACCGCTTGTTCT 58.858 39.130 0.00 0.00 42.57 3.01
4571 4777 4.215613 AGACAAAGGAATAACCGCTTGTTC 59.784 41.667 0.00 0.00 43.99 3.18
4572 4778 4.142038 AGACAAAGGAATAACCGCTTGTT 58.858 39.130 0.00 0.00 43.99 2.83
4573 4779 3.751518 AGACAAAGGAATAACCGCTTGT 58.248 40.909 0.00 0.00 45.41 3.16
4574 4780 4.003648 AGAGACAAAGGAATAACCGCTTG 58.996 43.478 0.00 0.00 44.74 4.01
4575 4781 4.287766 AGAGACAAAGGAATAACCGCTT 57.712 40.909 0.00 0.00 44.74 4.68
4576 4782 3.983044 AGAGACAAAGGAATAACCGCT 57.017 42.857 0.00 0.00 44.74 5.52
4577 4783 4.000988 TGAAGAGACAAAGGAATAACCGC 58.999 43.478 0.00 0.00 44.74 5.68
4578 4784 5.932303 TCTTGAAGAGACAAAGGAATAACCG 59.068 40.000 0.00 0.00 44.74 4.44
4579 4785 7.745620 TTCTTGAAGAGACAAAGGAATAACC 57.254 36.000 0.00 0.00 33.02 2.85
4580 4786 9.670719 CTTTTCTTGAAGAGACAAAGGAATAAC 57.329 33.333 9.07 0.00 33.56 1.89
4581 4787 8.850156 CCTTTTCTTGAAGAGACAAAGGAATAA 58.150 33.333 23.20 0.00 44.62 1.40
4582 4788 7.040409 GCCTTTTCTTGAAGAGACAAAGGAATA 60.040 37.037 28.27 0.00 44.62 1.75
4583 4789 6.239148 GCCTTTTCTTGAAGAGACAAAGGAAT 60.239 38.462 28.27 0.00 44.62 3.01
4584 4790 5.067805 GCCTTTTCTTGAAGAGACAAAGGAA 59.932 40.000 28.27 4.74 44.62 3.36
4585 4791 4.580580 GCCTTTTCTTGAAGAGACAAAGGA 59.419 41.667 28.27 0.00 44.62 3.36
4586 4792 4.555511 CGCCTTTTCTTGAAGAGACAAAGG 60.556 45.833 23.24 23.24 44.63 3.11
4587 4793 4.531332 CGCCTTTTCTTGAAGAGACAAAG 58.469 43.478 9.72 9.72 35.08 2.77
4588 4794 3.315191 CCGCCTTTTCTTGAAGAGACAAA 59.685 43.478 0.00 0.00 33.02 2.83
4589 4795 2.878406 CCGCCTTTTCTTGAAGAGACAA 59.122 45.455 0.00 0.00 33.02 3.18
4590 4796 2.494059 CCGCCTTTTCTTGAAGAGACA 58.506 47.619 0.00 0.00 33.02 3.41
4591 4797 1.197949 GCCGCCTTTTCTTGAAGAGAC 59.802 52.381 0.00 0.00 33.02 3.36
4592 4798 1.072331 AGCCGCCTTTTCTTGAAGAGA 59.928 47.619 0.00 0.00 0.00 3.10
4593 4799 1.528129 AGCCGCCTTTTCTTGAAGAG 58.472 50.000 0.00 0.00 0.00 2.85
4594 4800 2.615493 CCTAGCCGCCTTTTCTTGAAGA 60.615 50.000 0.00 0.00 0.00 2.87
4595 4801 1.740025 CCTAGCCGCCTTTTCTTGAAG 59.260 52.381 0.00 0.00 0.00 3.02
4596 4802 1.613255 CCCTAGCCGCCTTTTCTTGAA 60.613 52.381 0.00 0.00 0.00 2.69
4597 4803 0.035439 CCCTAGCCGCCTTTTCTTGA 60.035 55.000 0.00 0.00 0.00 3.02
4598 4804 0.322546 ACCCTAGCCGCCTTTTCTTG 60.323 55.000 0.00 0.00 0.00 3.02
4599 4805 0.404426 AACCCTAGCCGCCTTTTCTT 59.596 50.000 0.00 0.00 0.00 2.52
4600 4806 0.404426 AAACCCTAGCCGCCTTTTCT 59.596 50.000 0.00 0.00 0.00 2.52
4601 4807 0.809385 GAAACCCTAGCCGCCTTTTC 59.191 55.000 0.00 0.00 0.00 2.29
4602 4808 0.404426 AGAAACCCTAGCCGCCTTTT 59.596 50.000 0.00 0.00 0.00 2.27
4603 4809 0.322546 CAGAAACCCTAGCCGCCTTT 60.323 55.000 0.00 0.00 0.00 3.11
4604 4810 1.299976 CAGAAACCCTAGCCGCCTT 59.700 57.895 0.00 0.00 0.00 4.35
4605 4811 2.990479 CAGAAACCCTAGCCGCCT 59.010 61.111 0.00 0.00 0.00 5.52
4606 4812 2.824489 GCAGAAACCCTAGCCGCC 60.824 66.667 0.00 0.00 0.00 6.13
4607 4813 2.824489 GGCAGAAACCCTAGCCGC 60.824 66.667 0.00 0.00 37.41 6.53
4610 4816 1.224870 GGGAGGCAGAAACCCTAGC 59.775 63.158 0.00 0.00 40.39 3.42
4611 4817 1.265454 ACGGGAGGCAGAAACCCTAG 61.265 60.000 0.00 0.00 41.28 3.02
4612 4818 1.229400 ACGGGAGGCAGAAACCCTA 60.229 57.895 0.00 0.00 41.28 3.53
4613 4819 2.529389 ACGGGAGGCAGAAACCCT 60.529 61.111 0.00 0.00 41.28 4.34
4614 4820 2.046217 GACGGGAGGCAGAAACCC 60.046 66.667 0.00 0.00 38.26 4.11
4615 4821 2.434359 CGACGGGAGGCAGAAACC 60.434 66.667 0.00 0.00 38.29 3.27
4616 4822 2.434359 CCGACGGGAGGCAGAAAC 60.434 66.667 5.81 0.00 38.29 2.78
4617 4823 2.920912 ACCGACGGGAGGCAGAAA 60.921 61.111 20.00 0.00 38.29 2.52
4618 4824 3.691342 CACCGACGGGAGGCAGAA 61.691 66.667 20.00 0.00 38.29 3.02
4641 4847 0.171455 AGAAGACGTGGCAGATCGAC 59.829 55.000 0.00 0.00 0.00 4.20
4642 4848 0.171231 CAGAAGACGTGGCAGATCGA 59.829 55.000 0.00 0.00 0.00 3.59
4643 4849 0.803768 CCAGAAGACGTGGCAGATCG 60.804 60.000 0.00 0.00 0.00 3.69
4644 4850 0.460987 CCCAGAAGACGTGGCAGATC 60.461 60.000 0.00 0.00 33.24 2.75
4645 4851 1.599047 CCCAGAAGACGTGGCAGAT 59.401 57.895 0.00 0.00 33.24 2.90
4646 4852 3.059982 CCCAGAAGACGTGGCAGA 58.940 61.111 0.00 0.00 33.24 4.26
4647 4853 2.743928 GCCCAGAAGACGTGGCAG 60.744 66.667 7.41 0.00 43.46 4.85
4648 4854 4.329545 GGCCCAGAAGACGTGGCA 62.330 66.667 13.60 0.00 45.83 4.92
4650 4856 2.895424 AAGGGCCCAGAAGACGTGG 61.895 63.158 27.56 0.00 34.52 4.94
4651 4857 1.672356 CAAGGGCCCAGAAGACGTG 60.672 63.158 27.56 4.46 0.00 4.49
4652 4858 2.750350 CAAGGGCCCAGAAGACGT 59.250 61.111 27.56 0.00 0.00 4.34
4653 4859 2.747855 GCAAGGGCCCAGAAGACG 60.748 66.667 27.56 4.55 0.00 4.18
4654 4860 1.676967 CAGCAAGGGCCCAGAAGAC 60.677 63.158 27.56 6.86 42.56 3.01
4655 4861 1.847506 TCAGCAAGGGCCCAGAAGA 60.848 57.895 27.56 12.34 42.56 2.87
4656 4862 1.676967 GTCAGCAAGGGCCCAGAAG 60.677 63.158 27.56 11.66 42.56 2.85
4657 4863 2.436109 GTCAGCAAGGGCCCAGAA 59.564 61.111 27.56 0.00 42.56 3.02
4658 4864 4.020617 CGTCAGCAAGGGCCCAGA 62.021 66.667 27.56 10.75 42.56 3.86
4665 4871 4.785453 GCCCTCCCGTCAGCAAGG 62.785 72.222 0.00 0.00 0.00 3.61
4666 4872 3.672295 GAGCCCTCCCGTCAGCAAG 62.672 68.421 0.00 0.00 0.00 4.01
4667 4873 3.706373 GAGCCCTCCCGTCAGCAA 61.706 66.667 0.00 0.00 0.00 3.91
4677 4883 1.282157 ACACCTACAAATGGAGCCCTC 59.718 52.381 0.00 0.00 0.00 4.30
4678 4884 1.372501 ACACCTACAAATGGAGCCCT 58.627 50.000 0.00 0.00 0.00 5.19
4679 4885 2.215942 AACACCTACAAATGGAGCCC 57.784 50.000 0.00 0.00 0.00 5.19
4680 4886 3.421844 AGAAACACCTACAAATGGAGCC 58.578 45.455 0.00 0.00 0.00 4.70
4681 4887 4.518970 TGAAGAAACACCTACAAATGGAGC 59.481 41.667 0.00 0.00 0.00 4.70
4682 4888 6.263168 ACTTGAAGAAACACCTACAAATGGAG 59.737 38.462 0.00 0.00 0.00 3.86
4683 4889 6.126409 ACTTGAAGAAACACCTACAAATGGA 58.874 36.000 0.00 0.00 0.00 3.41
4684 4890 6.391227 ACTTGAAGAAACACCTACAAATGG 57.609 37.500 0.00 0.00 0.00 3.16
4685 4891 8.594687 CAAAACTTGAAGAAACACCTACAAATG 58.405 33.333 0.00 0.00 0.00 2.32
4686 4892 8.311109 ACAAAACTTGAAGAAACACCTACAAAT 58.689 29.630 0.00 0.00 0.00 2.32
4687 4893 7.662897 ACAAAACTTGAAGAAACACCTACAAA 58.337 30.769 0.00 0.00 0.00 2.83
4688 4894 7.222000 ACAAAACTTGAAGAAACACCTACAA 57.778 32.000 0.00 0.00 0.00 2.41
4689 4895 6.827586 ACAAAACTTGAAGAAACACCTACA 57.172 33.333 0.00 0.00 0.00 2.74
4690 4896 8.671028 TCTAACAAAACTTGAAGAAACACCTAC 58.329 33.333 0.00 0.00 0.00 3.18
4691 4897 8.795842 TCTAACAAAACTTGAAGAAACACCTA 57.204 30.769 0.00 0.00 0.00 3.08
4692 4898 7.393515 ACTCTAACAAAACTTGAAGAAACACCT 59.606 33.333 0.00 0.00 0.00 4.00
4693 4899 7.535997 ACTCTAACAAAACTTGAAGAAACACC 58.464 34.615 0.00 0.00 0.00 4.16
4694 4900 8.965986 AACTCTAACAAAACTTGAAGAAACAC 57.034 30.769 0.00 0.00 0.00 3.32
4700 4906 9.665264 GGACATAAACTCTAACAAAACTTGAAG 57.335 33.333 0.00 0.00 0.00 3.02
4701 4907 9.403583 AGGACATAAACTCTAACAAAACTTGAA 57.596 29.630 0.00 0.00 0.00 2.69
4702 4908 8.836413 CAGGACATAAACTCTAACAAAACTTGA 58.164 33.333 0.00 0.00 0.00 3.02
4703 4909 7.591426 GCAGGACATAAACTCTAACAAAACTTG 59.409 37.037 0.00 0.00 0.00 3.16
4704 4910 7.502561 AGCAGGACATAAACTCTAACAAAACTT 59.497 33.333 0.00 0.00 0.00 2.66
4705 4911 6.998673 AGCAGGACATAAACTCTAACAAAACT 59.001 34.615 0.00 0.00 0.00 2.66
4706 4912 7.041372 TGAGCAGGACATAAACTCTAACAAAAC 60.041 37.037 0.00 0.00 0.00 2.43
4707 4913 6.995686 TGAGCAGGACATAAACTCTAACAAAA 59.004 34.615 0.00 0.00 0.00 2.44
4708 4914 6.530120 TGAGCAGGACATAAACTCTAACAAA 58.470 36.000 0.00 0.00 0.00 2.83
4709 4915 6.109156 TGAGCAGGACATAAACTCTAACAA 57.891 37.500 0.00 0.00 0.00 2.83
4710 4916 5.724328 CTGAGCAGGACATAAACTCTAACA 58.276 41.667 0.00 0.00 0.00 2.41
4725 4931 2.225205 AGACTCGTCTTCCTGAGCAGG 61.225 57.143 10.29 10.29 40.20 4.85
4726 4932 1.135431 CAGACTCGTCTTCCTGAGCAG 60.135 57.143 0.00 0.00 37.98 4.24
4727 4933 0.884514 CAGACTCGTCTTCCTGAGCA 59.115 55.000 0.00 0.00 37.98 4.26
4728 4934 0.457681 GCAGACTCGTCTTCCTGAGC 60.458 60.000 0.00 0.00 37.98 4.26
4729 4935 0.884514 TGCAGACTCGTCTTCCTGAG 59.115 55.000 0.00 0.00 37.98 3.35
4730 4936 1.000163 GTTGCAGACTCGTCTTCCTGA 60.000 52.381 0.00 0.00 37.98 3.86
4731 4937 1.423395 GTTGCAGACTCGTCTTCCTG 58.577 55.000 0.00 0.00 37.98 3.86
4732 4938 0.039074 CGTTGCAGACTCGTCTTCCT 60.039 55.000 0.00 0.00 37.98 3.36
4733 4939 1.009389 CCGTTGCAGACTCGTCTTCC 61.009 60.000 0.00 0.00 37.98 3.46
4734 4940 1.618640 GCCGTTGCAGACTCGTCTTC 61.619 60.000 0.00 0.00 37.98 2.87
4735 4941 1.664965 GCCGTTGCAGACTCGTCTT 60.665 57.895 0.00 0.00 37.98 3.01
4736 4942 2.049063 GCCGTTGCAGACTCGTCT 60.049 61.111 0.00 0.00 41.37 4.18
4737 4943 1.222115 AAAGCCGTTGCAGACTCGTC 61.222 55.000 0.00 0.00 41.13 4.20
4738 4944 0.814010 AAAAGCCGTTGCAGACTCGT 60.814 50.000 0.00 0.00 41.13 4.18
4739 4945 0.110644 GAAAAGCCGTTGCAGACTCG 60.111 55.000 0.00 0.00 41.13 4.18
4740 4946 1.230324 AGAAAAGCCGTTGCAGACTC 58.770 50.000 0.00 0.00 41.13 3.36
4741 4947 1.334869 CAAGAAAAGCCGTTGCAGACT 59.665 47.619 0.00 0.00 41.13 3.24
4742 4948 1.333619 TCAAGAAAAGCCGTTGCAGAC 59.666 47.619 0.00 0.00 41.13 3.51
4743 4949 1.674359 TCAAGAAAAGCCGTTGCAGA 58.326 45.000 0.00 0.00 41.13 4.26
4744 4950 2.388121 CTTCAAGAAAAGCCGTTGCAG 58.612 47.619 0.00 0.00 41.13 4.41
4745 4951 1.535860 GCTTCAAGAAAAGCCGTTGCA 60.536 47.619 0.00 0.00 44.75 4.08
4746 4952 1.131771 GCTTCAAGAAAAGCCGTTGC 58.868 50.000 0.00 0.00 44.75 4.17
4753 4959 6.581171 ACCTTATTCCAGCTTCAAGAAAAG 57.419 37.500 0.00 0.00 0.00 2.27
4754 4960 6.777580 AGAACCTTATTCCAGCTTCAAGAAAA 59.222 34.615 0.00 0.00 0.00 2.29
4755 4961 6.306987 AGAACCTTATTCCAGCTTCAAGAAA 58.693 36.000 0.00 0.00 0.00 2.52
4756 4962 5.880901 AGAACCTTATTCCAGCTTCAAGAA 58.119 37.500 0.00 0.00 0.00 2.52
4757 4963 5.491982 GAGAACCTTATTCCAGCTTCAAGA 58.508 41.667 0.00 0.00 0.00 3.02
4758 4964 4.637977 GGAGAACCTTATTCCAGCTTCAAG 59.362 45.833 0.00 0.00 0.00 3.02
4759 4965 4.567747 GGGAGAACCTTATTCCAGCTTCAA 60.568 45.833 0.00 0.00 35.85 2.69
4760 4966 3.054361 GGGAGAACCTTATTCCAGCTTCA 60.054 47.826 0.00 0.00 35.85 3.02
4761 4967 3.546724 GGGAGAACCTTATTCCAGCTTC 58.453 50.000 0.00 0.00 35.85 3.86
4762 4968 2.242452 GGGGAGAACCTTATTCCAGCTT 59.758 50.000 0.00 0.00 40.03 3.74
4763 4969 1.847088 GGGGAGAACCTTATTCCAGCT 59.153 52.381 0.00 0.00 40.03 4.24
4764 4970 1.564348 TGGGGAGAACCTTATTCCAGC 59.436 52.381 0.00 0.00 40.03 4.85
4765 4971 2.092375 GGTGGGGAGAACCTTATTCCAG 60.092 54.545 0.00 0.00 40.03 3.86
4766 4972 1.920351 GGTGGGGAGAACCTTATTCCA 59.080 52.381 0.00 0.00 40.03 3.53
4767 4973 2.206223 AGGTGGGGAGAACCTTATTCC 58.794 52.381 0.00 0.00 46.14 3.01
4768 4974 3.181453 GCTAGGTGGGGAGAACCTTATTC 60.181 52.174 0.00 0.00 46.14 1.75
4769 4975 2.778270 GCTAGGTGGGGAGAACCTTATT 59.222 50.000 0.00 0.00 46.14 1.40
4770 4976 2.409570 GCTAGGTGGGGAGAACCTTAT 58.590 52.381 0.00 0.00 46.14 1.73
4771 4977 1.624391 GGCTAGGTGGGGAGAACCTTA 60.624 57.143 0.00 0.00 46.14 2.69
4772 4978 0.914902 GGCTAGGTGGGGAGAACCTT 60.915 60.000 0.00 0.00 46.14 3.50
4774 4980 2.376165 GGGCTAGGTGGGGAGAACC 61.376 68.421 0.00 0.00 38.03 3.62
4775 4981 2.376165 GGGGCTAGGTGGGGAGAAC 61.376 68.421 0.00 0.00 0.00 3.01
4776 4982 2.042261 GGGGCTAGGTGGGGAGAA 59.958 66.667 0.00 0.00 0.00 2.87
4777 4983 4.475444 CGGGGCTAGGTGGGGAGA 62.475 72.222 0.00 0.00 0.00 3.71
4778 4984 4.798682 ACGGGGCTAGGTGGGGAG 62.799 72.222 0.00 0.00 0.00 4.30
4779 4985 4.791069 GACGGGGCTAGGTGGGGA 62.791 72.222 0.00 0.00 0.00 4.81
4794 5000 1.376812 CTAAAGGCACCACCGGGAC 60.377 63.158 6.32 0.00 46.52 4.46
4795 5001 3.074281 CTAAAGGCACCACCGGGA 58.926 61.111 6.32 0.00 46.52 5.14
4796 5002 2.750237 GCTAAAGGCACCACCGGG 60.750 66.667 6.32 0.00 46.52 5.73
4805 5011 0.876342 CCTCCGACGATGCTAAAGGC 60.876 60.000 0.00 0.00 42.22 4.35
4806 5012 0.249489 CCCTCCGACGATGCTAAAGG 60.249 60.000 0.00 0.00 0.00 3.11
4807 5013 0.876342 GCCCTCCGACGATGCTAAAG 60.876 60.000 0.00 0.00 0.00 1.85
4808 5014 1.143183 GCCCTCCGACGATGCTAAA 59.857 57.895 0.00 0.00 0.00 1.85
4809 5015 2.812499 GCCCTCCGACGATGCTAA 59.188 61.111 0.00 0.00 0.00 3.09
4810 5016 3.592814 CGCCCTCCGACGATGCTA 61.593 66.667 0.00 0.00 40.02 3.49
4813 5019 2.663630 CTACACGCCCTCCGACGATG 62.664 65.000 0.00 0.00 41.02 3.84
4814 5020 2.438975 TACACGCCCTCCGACGAT 60.439 61.111 0.00 0.00 41.02 3.73
4815 5021 3.129502 CTACACGCCCTCCGACGA 61.130 66.667 0.00 0.00 41.02 4.20
4816 5022 3.109612 CTCTACACGCCCTCCGACG 62.110 68.421 0.00 0.00 41.02 5.12
4817 5023 2.772691 CCTCTACACGCCCTCCGAC 61.773 68.421 0.00 0.00 41.02 4.79
4818 5024 2.439701 CCTCTACACGCCCTCCGA 60.440 66.667 0.00 0.00 41.02 4.55
4819 5025 2.754658 ACCTCTACACGCCCTCCG 60.755 66.667 0.00 0.00 44.21 4.63
4820 5026 1.982938 ACACCTCTACACGCCCTCC 60.983 63.158 0.00 0.00 0.00 4.30
4821 5027 1.215647 CACACCTCTACACGCCCTC 59.784 63.158 0.00 0.00 0.00 4.30
4822 5028 1.533273 ACACACCTCTACACGCCCT 60.533 57.895 0.00 0.00 0.00 5.19
4823 5029 1.080025 GACACACCTCTACACGCCC 60.080 63.158 0.00 0.00 0.00 6.13
4824 5030 0.109226 GAGACACACCTCTACACGCC 60.109 60.000 0.00 0.00 0.00 5.68
4825 5031 0.109226 GGAGACACACCTCTACACGC 60.109 60.000 0.00 0.00 33.79 5.34
4826 5032 0.168348 CGGAGACACACCTCTACACG 59.832 60.000 0.00 0.00 33.79 4.49
4827 5033 1.531423 TCGGAGACACACCTCTACAC 58.469 55.000 0.00 0.00 33.79 2.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.