Multiple sequence alignment - TraesCS3B01G498200
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS3B01G498200 | chr3B | 100.000 | 5634 | 0 | 0 | 2472 | 8105 | 741858587 | 741864220 | 0.000000e+00 | 10327 |
1 | TraesCS3B01G498200 | chr3B | 100.000 | 2239 | 0 | 0 | 1 | 2239 | 741856116 | 741858354 | 0.000000e+00 | 4135 |
2 | TraesCS3B01G498200 | chr3D | 97.166 | 3564 | 65 | 10 | 2504 | 6056 | 559073196 | 559076734 | 0.000000e+00 | 5989 |
3 | TraesCS3B01G498200 | chr3D | 94.222 | 2250 | 100 | 12 | 1 | 2234 | 559070953 | 559073188 | 0.000000e+00 | 3408 |
4 | TraesCS3B01G498200 | chr3D | 92.435 | 1084 | 48 | 13 | 6122 | 7178 | 559077023 | 559078099 | 0.000000e+00 | 1517 |
5 | TraesCS3B01G498200 | chr3D | 94.023 | 686 | 30 | 6 | 7365 | 8042 | 559078136 | 559078818 | 0.000000e+00 | 1029 |
6 | TraesCS3B01G498200 | chr3D | 89.253 | 549 | 51 | 7 | 4 | 550 | 533666609 | 533666067 | 0.000000e+00 | 680 |
7 | TraesCS3B01G498200 | chr3D | 89.333 | 150 | 13 | 3 | 7215 | 7363 | 181140439 | 181140292 | 1.390000e-42 | 185 |
8 | TraesCS3B01G498200 | chr3A | 96.832 | 3567 | 67 | 10 | 2504 | 6062 | 695497225 | 695500753 | 0.000000e+00 | 5919 |
9 | TraesCS3B01G498200 | chr3A | 92.412 | 1700 | 79 | 16 | 551 | 2234 | 695495552 | 695497217 | 0.000000e+00 | 2379 |
10 | TraesCS3B01G498200 | chr3A | 88.654 | 1137 | 59 | 34 | 6096 | 7200 | 695500973 | 695502071 | 0.000000e+00 | 1321 |
11 | TraesCS3B01G498200 | chr3A | 93.786 | 692 | 34 | 4 | 7359 | 8042 | 695502082 | 695502772 | 0.000000e+00 | 1031 |
12 | TraesCS3B01G498200 | chr3A | 95.946 | 148 | 5 | 1 | 7214 | 7361 | 719628413 | 719628267 | 1.050000e-58 | 239 |
13 | TraesCS3B01G498200 | chr6D | 89.550 | 555 | 50 | 8 | 1 | 550 | 70528739 | 70529290 | 0.000000e+00 | 697 |
14 | TraesCS3B01G498200 | chr4B | 89.617 | 549 | 55 | 2 | 4 | 551 | 489267646 | 489268193 | 0.000000e+00 | 697 |
15 | TraesCS3B01G498200 | chr4B | 85.714 | 175 | 19 | 4 | 7214 | 7386 | 369280579 | 369280409 | 6.460000e-41 | 180 |
16 | TraesCS3B01G498200 | chr1D | 89.114 | 542 | 54 | 5 | 11 | 550 | 305798386 | 305797848 | 0.000000e+00 | 669 |
17 | TraesCS3B01G498200 | chr1D | 88.768 | 552 | 51 | 10 | 4 | 550 | 8412922 | 8412377 | 0.000000e+00 | 665 |
18 | TraesCS3B01G498200 | chr1D | 88.768 | 552 | 51 | 10 | 4 | 550 | 8444417 | 8443872 | 0.000000e+00 | 665 |
19 | TraesCS3B01G498200 | chr5B | 88.869 | 548 | 53 | 7 | 5 | 548 | 246874072 | 246874615 | 0.000000e+00 | 667 |
20 | TraesCS3B01G498200 | chr5B | 88.742 | 151 | 13 | 4 | 7215 | 7364 | 161709335 | 161709188 | 1.800000e-41 | 182 |
21 | TraesCS3B01G498200 | chrUn | 88.768 | 552 | 51 | 10 | 4 | 550 | 296004528 | 296003983 | 0.000000e+00 | 665 |
22 | TraesCS3B01G498200 | chr5A | 91.355 | 428 | 36 | 1 | 2472 | 2898 | 149229751 | 149230178 | 1.170000e-162 | 584 |
23 | TraesCS3B01G498200 | chr5A | 91.121 | 428 | 36 | 2 | 2472 | 2898 | 110283704 | 110283278 | 5.450000e-161 | 579 |
24 | TraesCS3B01G498200 | chr5A | 91.558 | 154 | 6 | 2 | 7215 | 7361 | 570012541 | 570012694 | 1.070000e-48 | 206 |
25 | TraesCS3B01G498200 | chr1A | 96.599 | 147 | 4 | 1 | 7215 | 7361 | 326009362 | 326009217 | 8.130000e-60 | 243 |
26 | TraesCS3B01G498200 | chr4A | 91.391 | 151 | 11 | 2 | 7214 | 7364 | 736265379 | 736265527 | 1.070000e-48 | 206 |
27 | TraesCS3B01G498200 | chr2B | 90.541 | 148 | 7 | 6 | 7215 | 7361 | 455464181 | 455464322 | 1.070000e-43 | 189 |
28 | TraesCS3B01G498200 | chr7A | 87.349 | 166 | 11 | 4 | 7205 | 7361 | 706517185 | 706517349 | 1.800000e-41 | 182 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS3B01G498200 | chr3B | 741856116 | 741864220 | 8104 | False | 7231.00 | 10327 | 100.0000 | 1 | 8105 | 2 | chr3B.!!$F1 | 8104 |
1 | TraesCS3B01G498200 | chr3D | 559070953 | 559078818 | 7865 | False | 2985.75 | 5989 | 94.4615 | 1 | 8042 | 4 | chr3D.!!$F1 | 8041 |
2 | TraesCS3B01G498200 | chr3D | 533666067 | 533666609 | 542 | True | 680.00 | 680 | 89.2530 | 4 | 550 | 1 | chr3D.!!$R2 | 546 |
3 | TraesCS3B01G498200 | chr3A | 695495552 | 695502772 | 7220 | False | 2662.50 | 5919 | 92.9210 | 551 | 8042 | 4 | chr3A.!!$F1 | 7491 |
4 | TraesCS3B01G498200 | chr6D | 70528739 | 70529290 | 551 | False | 697.00 | 697 | 89.5500 | 1 | 550 | 1 | chr6D.!!$F1 | 549 |
5 | TraesCS3B01G498200 | chr4B | 489267646 | 489268193 | 547 | False | 697.00 | 697 | 89.6170 | 4 | 551 | 1 | chr4B.!!$F1 | 547 |
6 | TraesCS3B01G498200 | chr1D | 305797848 | 305798386 | 538 | True | 669.00 | 669 | 89.1140 | 11 | 550 | 1 | chr1D.!!$R3 | 539 |
7 | TraesCS3B01G498200 | chr1D | 8412377 | 8412922 | 545 | True | 665.00 | 665 | 88.7680 | 4 | 550 | 1 | chr1D.!!$R1 | 546 |
8 | TraesCS3B01G498200 | chr1D | 8443872 | 8444417 | 545 | True | 665.00 | 665 | 88.7680 | 4 | 550 | 1 | chr1D.!!$R2 | 546 |
9 | TraesCS3B01G498200 | chr5B | 246874072 | 246874615 | 543 | False | 667.00 | 667 | 88.8690 | 5 | 548 | 1 | chr5B.!!$F1 | 543 |
10 | TraesCS3B01G498200 | chrUn | 296003983 | 296004528 | 545 | True | 665.00 | 665 | 88.7680 | 4 | 550 | 1 | chrUn.!!$R1 | 546 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
189 | 192 | 0.553819 | AGATGACGGAGCCTAGGAGT | 59.446 | 55.000 | 14.75 | 6.13 | 0.00 | 3.85 | F |
756 | 765 | 0.952497 | GTTCTTCGACCCGGGGAAAC | 60.952 | 60.000 | 27.92 | 14.80 | 0.00 | 2.78 | F |
1418 | 1438 | 0.746563 | TCGATTGGAATGGGTTCGCC | 60.747 | 55.000 | 0.00 | 0.00 | 35.10 | 5.54 | F |
2500 | 2528 | 1.596727 | CGAGGAGAAATAAGCAGCTGC | 59.403 | 52.381 | 31.53 | 31.53 | 42.49 | 5.25 | F |
2663 | 2691 | 1.628846 | TCACCCTGGCTAAGAAGGTTC | 59.371 | 52.381 | 0.00 | 0.00 | 0.00 | 3.62 | F |
4556 | 4595 | 1.108727 | TTGTTGGAAGCCAGGCTGTG | 61.109 | 55.000 | 17.05 | 6.19 | 39.62 | 3.66 | F |
6262 | 6525 | 0.889994 | GCATGTGTTGCCTGGATGAA | 59.110 | 50.000 | 0.00 | 0.00 | 46.15 | 2.57 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1014 | 1024 | 0.462789 | AGTTATAGAACACGGGGGCG | 59.537 | 55.000 | 2.62 | 0.00 | 38.10 | 6.13 | R |
2493 | 2521 | 0.383231 | ACAAAAGTGTCAGCAGCTGC | 59.617 | 50.000 | 31.53 | 31.53 | 35.34 | 5.25 | R |
2890 | 2918 | 1.070134 | ACCAGTAGCTCGAACTTGCAA | 59.930 | 47.619 | 0.00 | 0.00 | 0.00 | 4.08 | R |
4444 | 4483 | 0.039764 | TTGGAGAGAGGAAGGAGCGA | 59.960 | 55.000 | 0.00 | 0.00 | 0.00 | 4.93 | R |
4613 | 4652 | 3.745975 | TCGATGTGTGAACAATCTTCACC | 59.254 | 43.478 | 10.02 | 3.69 | 46.01 | 4.02 | R |
6360 | 6642 | 2.223805 | GCTTTTTGGACAGGAACACAGG | 60.224 | 50.000 | 0.00 | 0.00 | 0.00 | 4.00 | R |
7210 | 7516 | 0.033306 | AGGAACGGAGGGAGTAGGTC | 60.033 | 60.000 | 0.00 | 0.00 | 0.00 | 3.85 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
64 | 67 | 6.977244 | AGGTATAGCCCATTCCTTTGATAT | 57.023 | 37.500 | 0.00 | 0.00 | 38.26 | 1.63 |
189 | 192 | 0.553819 | AGATGACGGAGCCTAGGAGT | 59.446 | 55.000 | 14.75 | 6.13 | 0.00 | 3.85 |
261 | 264 | 1.970114 | GAGACCACCGACGACCAGA | 60.970 | 63.158 | 0.00 | 0.00 | 0.00 | 3.86 |
302 | 305 | 1.986882 | CAGGAGGTCTGTGCCTTTTT | 58.013 | 50.000 | 0.00 | 0.00 | 39.34 | 1.94 |
368 | 372 | 8.088981 | ACTTGTTTACTTATGTCTGTACTCAGG | 58.911 | 37.037 | 0.00 | 0.00 | 41.59 | 3.86 |
369 | 373 | 6.395629 | TGTTTACTTATGTCTGTACTCAGGC | 58.604 | 40.000 | 0.00 | 0.00 | 45.48 | 4.85 |
398 | 402 | 3.062774 | GCTTCCGCTGACTCTTTTGTATC | 59.937 | 47.826 | 0.00 | 0.00 | 0.00 | 2.24 |
581 | 587 | 1.154093 | GATCTTGGTCGACGACGCA | 60.154 | 57.895 | 20.92 | 16.59 | 39.58 | 5.24 |
597 | 605 | 2.459442 | GCATGTCGCACTGCTCTCC | 61.459 | 63.158 | 0.00 | 0.00 | 41.79 | 3.71 |
747 | 756 | 1.137513 | CAACTCGTGGTTCTTCGACC | 58.862 | 55.000 | 0.00 | 0.00 | 40.23 | 4.79 |
756 | 765 | 0.952497 | GTTCTTCGACCCGGGGAAAC | 60.952 | 60.000 | 27.92 | 14.80 | 0.00 | 2.78 |
758 | 767 | 1.071814 | CTTCGACCCGGGGAAACAA | 59.928 | 57.895 | 27.92 | 8.90 | 0.00 | 2.83 |
760 | 769 | 2.992607 | TTCGACCCGGGGAAACAACG | 62.993 | 60.000 | 27.92 | 17.14 | 0.00 | 4.10 |
762 | 771 | 4.960866 | ACCCGGGGAAACAACGGC | 62.961 | 66.667 | 27.92 | 0.00 | 46.94 | 5.68 |
814 | 823 | 2.296792 | GCAACCAAACAAAGCCCAAAT | 58.703 | 42.857 | 0.00 | 0.00 | 0.00 | 2.32 |
846 | 855 | 4.401925 | AGCCTTGAGATATGCAATAACCC | 58.598 | 43.478 | 0.00 | 0.00 | 29.06 | 4.11 |
873 | 882 | 1.470458 | GCAAGGGCTCTAAATGCAAGC | 60.470 | 52.381 | 3.80 | 0.00 | 37.00 | 4.01 |
903 | 912 | 5.508567 | TGAACAAGGGCATGATTGAGAATA | 58.491 | 37.500 | 11.33 | 0.00 | 0.00 | 1.75 |
984 | 994 | 2.091541 | CCCGCAACAGTACAATGGAAT | 58.908 | 47.619 | 0.00 | 0.00 | 0.00 | 3.01 |
988 | 998 | 3.483574 | CGCAACAGTACAATGGAATCGAC | 60.484 | 47.826 | 0.00 | 0.00 | 0.00 | 4.20 |
1004 | 1014 | 3.157217 | GACCGATGATCCGCAGCCT | 62.157 | 63.158 | 0.00 | 0.00 | 0.00 | 4.58 |
1289 | 1307 | 3.723922 | CCGGGAATGGTTCGGGGT | 61.724 | 66.667 | 0.00 | 0.00 | 40.07 | 4.95 |
1291 | 1309 | 2.044352 | GGGAATGGTTCGGGGTGG | 60.044 | 66.667 | 0.00 | 0.00 | 0.00 | 4.61 |
1304 | 1324 | 1.616628 | GGGTGGGATGTGGAGGTCT | 60.617 | 63.158 | 0.00 | 0.00 | 0.00 | 3.85 |
1321 | 1341 | 4.750695 | TGGCGGGGGATCAGGGAA | 62.751 | 66.667 | 0.00 | 0.00 | 0.00 | 3.97 |
1384 | 1404 | 5.466819 | CATCCATCCATCCATTTCGATTTG | 58.533 | 41.667 | 0.00 | 0.00 | 0.00 | 2.32 |
1418 | 1438 | 0.746563 | TCGATTGGAATGGGTTCGCC | 60.747 | 55.000 | 0.00 | 0.00 | 35.10 | 5.54 |
1423 | 1443 | 2.746277 | GAATGGGTTCGCCGCAGT | 60.746 | 61.111 | 0.00 | 0.00 | 39.65 | 4.40 |
1428 | 1448 | 2.740826 | GGTTCGCCGCAGTTAGCA | 60.741 | 61.111 | 0.00 | 0.00 | 46.13 | 3.49 |
1444 | 1464 | 7.119360 | GCAGTTAGCATTTTGTTCTTTGTTTC | 58.881 | 34.615 | 0.00 | 0.00 | 44.79 | 2.78 |
1485 | 1505 | 6.834168 | TTTGGGTTTGGCATTTTTGTTTTA | 57.166 | 29.167 | 0.00 | 0.00 | 0.00 | 1.52 |
1619 | 1639 | 3.750371 | CCTCTGTGGGTTAACAATCACA | 58.250 | 45.455 | 19.96 | 19.96 | 37.73 | 3.58 |
1665 | 1685 | 7.944061 | TGATTGCCATCAGTATAAAAGAATGG | 58.056 | 34.615 | 0.00 | 0.00 | 34.22 | 3.16 |
1712 | 1732 | 3.321039 | TCCATATCTTCAGGCAGGACAT | 58.679 | 45.455 | 0.00 | 0.00 | 0.00 | 3.06 |
1751 | 1771 | 7.047271 | AGTTCCAGATGATAGAAAAGAAGAGC | 58.953 | 38.462 | 0.00 | 0.00 | 0.00 | 4.09 |
2131 | 2159 | 8.067784 | TGTAAGAAGTTGTTTCTCTTTTATGCG | 58.932 | 33.333 | 0.00 | 0.00 | 45.41 | 4.73 |
2139 | 2167 | 5.468409 | TGTTTCTCTTTTATGCGTGTCATCA | 59.532 | 36.000 | 0.00 | 0.00 | 36.63 | 3.07 |
2185 | 2213 | 7.978975 | GCTGGTTGGCAAATTTCTATAAACATA | 59.021 | 33.333 | 0.00 | 0.00 | 0.00 | 2.29 |
2234 | 2262 | 9.255304 | TCACCTTATGAACAAAAAGCATTTAAC | 57.745 | 29.630 | 0.00 | 0.00 | 32.71 | 2.01 |
2235 | 2263 | 9.039870 | CACCTTATGAACAAAAAGCATTTAACA | 57.960 | 29.630 | 0.00 | 0.00 | 37.28 | 2.41 |
2237 | 2265 | 8.213812 | CCTTATGAACAAAAAGCATTTAACACG | 58.786 | 33.333 | 0.00 | 0.00 | 37.28 | 4.49 |
2494 | 2522 | 4.442706 | TGGTCAATCGAGGAGAAATAAGC | 58.557 | 43.478 | 0.00 | 0.00 | 0.00 | 3.09 |
2495 | 2523 | 4.081142 | TGGTCAATCGAGGAGAAATAAGCA | 60.081 | 41.667 | 0.00 | 0.00 | 0.00 | 3.91 |
2496 | 2524 | 4.509600 | GGTCAATCGAGGAGAAATAAGCAG | 59.490 | 45.833 | 0.00 | 0.00 | 0.00 | 4.24 |
2497 | 2525 | 4.025313 | GTCAATCGAGGAGAAATAAGCAGC | 60.025 | 45.833 | 0.00 | 0.00 | 0.00 | 5.25 |
2498 | 2526 | 4.125703 | CAATCGAGGAGAAATAAGCAGCT | 58.874 | 43.478 | 0.00 | 0.00 | 0.00 | 4.24 |
2499 | 2527 | 3.170791 | TCGAGGAGAAATAAGCAGCTG | 57.829 | 47.619 | 10.11 | 10.11 | 0.00 | 4.24 |
2500 | 2528 | 1.596727 | CGAGGAGAAATAAGCAGCTGC | 59.403 | 52.381 | 31.53 | 31.53 | 42.49 | 5.25 |
2624 | 2652 | 9.656323 | TTATCTACATACTACAGAGATGGGTTT | 57.344 | 33.333 | 0.00 | 0.00 | 0.00 | 3.27 |
2663 | 2691 | 1.628846 | TCACCCTGGCTAAGAAGGTTC | 59.371 | 52.381 | 0.00 | 0.00 | 0.00 | 3.62 |
2690 | 2718 | 4.494484 | AGAAGCACAAAACTGTCAAAACC | 58.506 | 39.130 | 0.00 | 0.00 | 0.00 | 3.27 |
2802 | 2830 | 3.392947 | TCTGTTGGTTACCTTCCATGTCA | 59.607 | 43.478 | 2.07 | 0.00 | 34.75 | 3.58 |
2808 | 2836 | 3.119495 | GGTTACCTTCCATGTCAATGCAC | 60.119 | 47.826 | 0.00 | 0.00 | 31.93 | 4.57 |
2809 | 2837 | 2.291209 | ACCTTCCATGTCAATGCACA | 57.709 | 45.000 | 0.00 | 0.00 | 31.93 | 4.57 |
2890 | 2918 | 3.034635 | GTCCTGTCATCTATGTCTGGGT | 58.965 | 50.000 | 11.23 | 0.00 | 36.28 | 4.51 |
2963 | 2991 | 4.130857 | TGAAATGTGAACTCGTAAGGCAA | 58.869 | 39.130 | 0.00 | 0.00 | 38.47 | 4.52 |
3091 | 3127 | 6.291648 | CTACCCATAGCACATCATGTCTAT | 57.708 | 41.667 | 0.00 | 0.00 | 0.00 | 1.98 |
3174 | 3210 | 4.437930 | GCATGTGGCTGTCTCTTCAAATAC | 60.438 | 45.833 | 0.00 | 0.00 | 40.25 | 1.89 |
3308 | 3344 | 6.702716 | TCCTTATTTTCCAAACACTTCGTT | 57.297 | 33.333 | 0.00 | 0.00 | 40.50 | 3.85 |
3340 | 3376 | 8.635765 | TTGGGCTTATTATATTCTTAGGCTTG | 57.364 | 34.615 | 0.00 | 0.00 | 0.00 | 4.01 |
3482 | 3518 | 2.621998 | CCAATTGTCATCATCTGGCTCC | 59.378 | 50.000 | 4.43 | 0.00 | 0.00 | 4.70 |
3639 | 3675 | 6.852420 | ACTGCTTTCTATGACAGGTTAGTA | 57.148 | 37.500 | 0.00 | 0.00 | 34.40 | 1.82 |
3656 | 3692 | 9.302345 | CAGGTTAGTAACTGTCAACATATACAG | 57.698 | 37.037 | 12.65 | 2.43 | 46.84 | 2.74 |
3674 | 3710 | 3.313791 | ACAGGGGGTAAAATTGTGCTTT | 58.686 | 40.909 | 0.00 | 0.00 | 0.00 | 3.51 |
3677 | 3713 | 2.065512 | GGGGTAAAATTGTGCTTTGCG | 58.934 | 47.619 | 0.00 | 0.00 | 0.00 | 4.85 |
3681 | 3717 | 4.291783 | GGTAAAATTGTGCTTTGCGTGTA | 58.708 | 39.130 | 0.00 | 0.00 | 0.00 | 2.90 |
3682 | 3718 | 4.147479 | GGTAAAATTGTGCTTTGCGTGTAC | 59.853 | 41.667 | 0.00 | 0.00 | 0.00 | 2.90 |
3683 | 3719 | 3.428746 | AAATTGTGCTTTGCGTGTACA | 57.571 | 38.095 | 0.00 | 0.00 | 0.00 | 2.90 |
3684 | 3720 | 3.641437 | AATTGTGCTTTGCGTGTACAT | 57.359 | 38.095 | 0.00 | 0.00 | 30.79 | 2.29 |
3685 | 3721 | 3.641437 | ATTGTGCTTTGCGTGTACATT | 57.359 | 38.095 | 0.00 | 0.00 | 30.79 | 2.71 |
3686 | 3722 | 2.679355 | TGTGCTTTGCGTGTACATTC | 57.321 | 45.000 | 0.00 | 0.00 | 0.00 | 2.67 |
3687 | 3723 | 2.217750 | TGTGCTTTGCGTGTACATTCT | 58.782 | 42.857 | 0.00 | 0.00 | 0.00 | 2.40 |
3688 | 3724 | 2.032117 | TGTGCTTTGCGTGTACATTCTG | 60.032 | 45.455 | 0.00 | 0.00 | 0.00 | 3.02 |
3689 | 3725 | 2.032030 | GTGCTTTGCGTGTACATTCTGT | 60.032 | 45.455 | 0.00 | 0.00 | 0.00 | 3.41 |
3690 | 3726 | 3.185594 | GTGCTTTGCGTGTACATTCTGTA | 59.814 | 43.478 | 0.00 | 0.00 | 0.00 | 2.74 |
3691 | 3727 | 3.431912 | TGCTTTGCGTGTACATTCTGTAG | 59.568 | 43.478 | 0.00 | 0.00 | 32.84 | 2.74 |
3692 | 3728 | 3.432252 | GCTTTGCGTGTACATTCTGTAGT | 59.568 | 43.478 | 0.00 | 0.00 | 32.84 | 2.73 |
3693 | 3729 | 4.624024 | GCTTTGCGTGTACATTCTGTAGTA | 59.376 | 41.667 | 0.00 | 0.00 | 32.84 | 1.82 |
3694 | 3730 | 5.119588 | GCTTTGCGTGTACATTCTGTAGTAA | 59.880 | 40.000 | 0.00 | 0.00 | 32.84 | 2.24 |
3695 | 3731 | 6.347079 | GCTTTGCGTGTACATTCTGTAGTAAA | 60.347 | 38.462 | 0.00 | 0.00 | 32.84 | 2.01 |
3696 | 3732 | 7.479897 | TTTGCGTGTACATTCTGTAGTAAAA | 57.520 | 32.000 | 0.00 | 0.00 | 32.84 | 1.52 |
3697 | 3733 | 7.479897 | TTGCGTGTACATTCTGTAGTAAAAA | 57.520 | 32.000 | 0.00 | 0.00 | 32.84 | 1.94 |
4064 | 4100 | 6.940298 | TGACATTTCCCAAAGAACCTAGTTAG | 59.060 | 38.462 | 0.00 | 0.00 | 32.95 | 2.34 |
4379 | 4418 | 9.645059 | TTTTTATCAAAGAACATGTTTCACACA | 57.355 | 25.926 | 13.36 | 0.00 | 40.71 | 3.72 |
4422 | 4461 | 4.141733 | CCATCCCAGGTTTTTGAACTTGTT | 60.142 | 41.667 | 1.64 | 0.00 | 0.00 | 2.83 |
4432 | 4471 | 6.308041 | GGTTTTTGAACTTGTTTCTCACTCAC | 59.692 | 38.462 | 0.00 | 0.00 | 34.97 | 3.51 |
4434 | 4473 | 3.541632 | TGAACTTGTTTCTCACTCACCC | 58.458 | 45.455 | 0.00 | 0.00 | 34.97 | 4.61 |
4556 | 4595 | 1.108727 | TTGTTGGAAGCCAGGCTGTG | 61.109 | 55.000 | 17.05 | 6.19 | 39.62 | 3.66 |
4586 | 4625 | 6.965500 | CAGCAACATTCTCTATTGTAAAGCAG | 59.035 | 38.462 | 0.00 | 0.00 | 0.00 | 4.24 |
4733 | 4772 | 5.163290 | TGCATTCGGTGATACAACCCTTATA | 60.163 | 40.000 | 0.00 | 0.00 | 36.84 | 0.98 |
4833 | 4872 | 7.365497 | TCCAGCATTCTCATTTACTGATAGA | 57.635 | 36.000 | 0.00 | 0.00 | 32.10 | 1.98 |
4964 | 5003 | 8.761575 | ACATAATATTTGCCTTGTTGTTTCTG | 57.238 | 30.769 | 0.00 | 0.00 | 0.00 | 3.02 |
4973 | 5012 | 6.872920 | TGCCTTGTTGTTTCTGTTATTCTTT | 58.127 | 32.000 | 0.00 | 0.00 | 0.00 | 2.52 |
5020 | 5059 | 2.484417 | CCTCATCCCTCATGAAGGTTCG | 60.484 | 54.545 | 10.22 | 0.90 | 44.56 | 3.95 |
5549 | 5588 | 2.257034 | GTGATAAGAACCACCGACGAC | 58.743 | 52.381 | 0.00 | 0.00 | 0.00 | 4.34 |
5962 | 6001 | 4.481368 | TTTACTATGTGTAGCCTGGTGG | 57.519 | 45.455 | 0.00 | 0.00 | 32.08 | 4.61 |
6041 | 6080 | 5.176406 | GTCACCGGTTAAAACTGACTAGTTC | 59.824 | 44.000 | 2.97 | 0.00 | 46.14 | 3.01 |
6046 | 6085 | 6.351626 | CCGGTTAAAACTGACTAGTTCCCTAT | 60.352 | 42.308 | 0.00 | 0.00 | 46.14 | 2.57 |
6049 | 6088 | 7.277319 | GGTTAAAACTGACTAGTTCCCTATTCG | 59.723 | 40.741 | 0.00 | 0.00 | 46.14 | 3.34 |
6062 | 6101 | 4.236195 | TCCCTATTCGGATACCATTTGGA | 58.764 | 43.478 | 3.01 | 0.00 | 35.02 | 3.53 |
6063 | 6102 | 4.849810 | TCCCTATTCGGATACCATTTGGAT | 59.150 | 41.667 | 3.01 | 0.00 | 35.02 | 3.41 |
6064 | 6103 | 6.026834 | TCCCTATTCGGATACCATTTGGATA | 58.973 | 40.000 | 3.01 | 0.00 | 35.02 | 2.59 |
6065 | 6104 | 6.502510 | TCCCTATTCGGATACCATTTGGATAA | 59.497 | 38.462 | 3.01 | 0.00 | 35.02 | 1.75 |
6066 | 6105 | 7.183839 | TCCCTATTCGGATACCATTTGGATAAT | 59.816 | 37.037 | 3.01 | 0.00 | 35.02 | 1.28 |
6067 | 6106 | 7.283127 | CCCTATTCGGATACCATTTGGATAATG | 59.717 | 40.741 | 3.01 | 0.00 | 35.02 | 1.90 |
6068 | 6107 | 5.957842 | TTCGGATACCATTTGGATAATGC | 57.042 | 39.130 | 3.01 | 0.00 | 38.94 | 3.56 |
6069 | 6108 | 4.331968 | TCGGATACCATTTGGATAATGCC | 58.668 | 43.478 | 3.01 | 0.00 | 38.94 | 4.40 |
6070 | 6109 | 4.042809 | TCGGATACCATTTGGATAATGCCT | 59.957 | 41.667 | 3.01 | 0.00 | 38.94 | 4.75 |
6071 | 6110 | 4.766891 | CGGATACCATTTGGATAATGCCTT | 59.233 | 41.667 | 3.01 | 0.00 | 38.94 | 4.35 |
6072 | 6111 | 5.106157 | CGGATACCATTTGGATAATGCCTTC | 60.106 | 44.000 | 3.01 | 0.00 | 38.94 | 3.46 |
6073 | 6112 | 6.012745 | GGATACCATTTGGATAATGCCTTCT | 58.987 | 40.000 | 3.01 | 0.00 | 38.94 | 2.85 |
6117 | 6342 | 5.794687 | TGCTTACTGTTTATGTTCCATCG | 57.205 | 39.130 | 0.00 | 0.00 | 0.00 | 3.84 |
6155 | 6417 | 3.884895 | TCCTTTATGCCATTGTCATCGT | 58.115 | 40.909 | 0.00 | 0.00 | 0.00 | 3.73 |
6160 | 6422 | 0.904649 | TGCCATTGTCATCGTCCTCT | 59.095 | 50.000 | 0.00 | 0.00 | 0.00 | 3.69 |
6202 | 6464 | 3.817709 | TCCCCTTGCTTTTTGAAGTTG | 57.182 | 42.857 | 0.00 | 0.00 | 0.00 | 3.16 |
6204 | 6466 | 3.118811 | TCCCCTTGCTTTTTGAAGTTGTG | 60.119 | 43.478 | 0.00 | 0.00 | 0.00 | 3.33 |
6262 | 6525 | 0.889994 | GCATGTGTTGCCTGGATGAA | 59.110 | 50.000 | 0.00 | 0.00 | 46.15 | 2.57 |
6311 | 6575 | 8.060020 | TCTAATGTGAAAACATTGCGAAAAAG | 57.940 | 30.769 | 13.04 | 2.68 | 40.20 | 2.27 |
6312 | 6576 | 6.660887 | AATGTGAAAACATTGCGAAAAAGT | 57.339 | 29.167 | 3.39 | 0.00 | 38.72 | 2.66 |
6313 | 6577 | 5.694674 | TGTGAAAACATTGCGAAAAAGTC | 57.305 | 34.783 | 0.00 | 0.00 | 0.00 | 3.01 |
6314 | 6578 | 5.164233 | TGTGAAAACATTGCGAAAAAGTCA | 58.836 | 33.333 | 0.00 | 0.00 | 0.00 | 3.41 |
6316 | 6580 | 4.564769 | TGAAAACATTGCGAAAAAGTCACC | 59.435 | 37.500 | 0.00 | 0.00 | 0.00 | 4.02 |
6338 | 6620 | 9.674068 | TCACCTGCTTTATACATGTGTTAATTA | 57.326 | 29.630 | 9.11 | 0.00 | 35.79 | 1.40 |
6397 | 6679 | 6.603997 | TCCAAAAAGCAAACTAGTTGGAAGTA | 59.396 | 34.615 | 14.52 | 0.00 | 42.09 | 2.24 |
6432 | 6714 | 6.172630 | CAACTATTTTGCCCCTAAATTTGCT | 58.827 | 36.000 | 0.00 | 0.00 | 0.00 | 3.91 |
6443 | 6725 | 5.423290 | CCCCTAAATTTGCTTTTCCTCTCAT | 59.577 | 40.000 | 0.00 | 0.00 | 0.00 | 2.90 |
6452 | 6742 | 7.907214 | TTGCTTTTCCTCTCATTAAGTACTC | 57.093 | 36.000 | 0.00 | 0.00 | 0.00 | 2.59 |
6506 | 6798 | 5.948162 | AGGTGCTCAAACAATTATGTCTCAT | 59.052 | 36.000 | 0.00 | 0.00 | 39.40 | 2.90 |
6582 | 6874 | 1.835267 | GTTCCCGGTGCCCCTTTTT | 60.835 | 57.895 | 0.00 | 0.00 | 0.00 | 1.94 |
6586 | 6878 | 2.570284 | CCGGTGCCCCTTTTTGACC | 61.570 | 63.158 | 0.00 | 0.00 | 0.00 | 4.02 |
6618 | 6910 | 6.630071 | TCGTAGTCAGATGATTGTCATTTCA | 58.370 | 36.000 | 0.00 | 0.00 | 37.20 | 2.69 |
6658 | 6950 | 6.839124 | TTGAAAGTATTGTCATTCTGGCAT | 57.161 | 33.333 | 0.00 | 0.00 | 29.04 | 4.40 |
6689 | 6981 | 7.775093 | TCTTCTTTCTTGAACTGAATTGAAGGA | 59.225 | 33.333 | 1.69 | 0.00 | 36.38 | 3.36 |
6690 | 6982 | 7.502120 | TCTTTCTTGAACTGAATTGAAGGAG | 57.498 | 36.000 | 0.00 | 0.00 | 32.76 | 3.69 |
6691 | 6983 | 6.488006 | TCTTTCTTGAACTGAATTGAAGGAGG | 59.512 | 38.462 | 0.00 | 0.00 | 32.76 | 4.30 |
6700 | 6992 | 4.836825 | TGAATTGAAGGAGGTGTCTGATC | 58.163 | 43.478 | 0.00 | 0.00 | 0.00 | 2.92 |
6706 | 6998 | 3.971245 | AGGAGGTGTCTGATCAGAAAC | 57.029 | 47.619 | 30.62 | 30.62 | 43.39 | 2.78 |
6728 | 7021 | 0.112412 | TTTCCTCCCTTTCCAGTGCC | 59.888 | 55.000 | 0.00 | 0.00 | 0.00 | 5.01 |
6866 | 7159 | 2.563976 | GCGCTGTGCATGTTAATATCG | 58.436 | 47.619 | 8.57 | 0.00 | 45.45 | 2.92 |
6972 | 7276 | 4.812626 | TGTACTTCTTCTTTTGGGAACGAC | 59.187 | 41.667 | 0.00 | 0.00 | 0.00 | 4.34 |
7007 | 7311 | 6.081536 | CGATTTTGTCGCATAAATTTTGCT | 57.918 | 33.333 | 17.37 | 3.67 | 44.33 | 3.91 |
7039 | 7343 | 7.070571 | CCCCCTTAATCTGTATAAATTTTGCCA | 59.929 | 37.037 | 0.00 | 0.00 | 0.00 | 4.92 |
7095 | 7400 | 4.939255 | AGAATGGTGTCATCCAAATTCCT | 58.061 | 39.130 | 0.00 | 0.00 | 41.09 | 3.36 |
7188 | 7494 | 4.403432 | CCTCCCTGTGCAAACATATGAAAT | 59.597 | 41.667 | 10.38 | 0.00 | 0.00 | 2.17 |
7200 | 7506 | 5.074584 | ACATATGAAATGCATGCACACAA | 57.925 | 34.783 | 25.37 | 10.07 | 37.87 | 3.33 |
7201 | 7507 | 4.865925 | ACATATGAAATGCATGCACACAAC | 59.134 | 37.500 | 25.37 | 13.17 | 37.87 | 3.32 |
7202 | 7508 | 2.884894 | TGAAATGCATGCACACAACA | 57.115 | 40.000 | 25.37 | 15.58 | 0.00 | 3.33 |
7203 | 7509 | 2.471818 | TGAAATGCATGCACACAACAC | 58.528 | 42.857 | 25.37 | 10.73 | 0.00 | 3.32 |
7204 | 7510 | 2.159142 | TGAAATGCATGCACACAACACA | 60.159 | 40.909 | 25.37 | 13.14 | 0.00 | 3.72 |
7205 | 7511 | 2.598686 | AATGCATGCACACAACACAA | 57.401 | 40.000 | 25.37 | 0.00 | 0.00 | 3.33 |
7206 | 7512 | 2.143008 | ATGCATGCACACAACACAAG | 57.857 | 45.000 | 25.37 | 0.00 | 0.00 | 3.16 |
7207 | 7513 | 0.816373 | TGCATGCACACAACACAAGT | 59.184 | 45.000 | 18.46 | 0.00 | 0.00 | 3.16 |
7208 | 7514 | 1.202203 | GCATGCACACAACACAAGTG | 58.798 | 50.000 | 14.21 | 0.00 | 42.56 | 3.16 |
7221 | 7527 | 2.400467 | ACAAGTGTGACCTACTCCCT | 57.600 | 50.000 | 0.00 | 0.00 | 0.00 | 4.20 |
7222 | 7528 | 2.249139 | ACAAGTGTGACCTACTCCCTC | 58.751 | 52.381 | 0.00 | 0.00 | 0.00 | 4.30 |
7223 | 7529 | 1.550976 | CAAGTGTGACCTACTCCCTCC | 59.449 | 57.143 | 0.00 | 0.00 | 0.00 | 4.30 |
7224 | 7530 | 0.323542 | AGTGTGACCTACTCCCTCCG | 60.324 | 60.000 | 0.00 | 0.00 | 0.00 | 4.63 |
7225 | 7531 | 0.611340 | GTGTGACCTACTCCCTCCGT | 60.611 | 60.000 | 0.00 | 0.00 | 0.00 | 4.69 |
7226 | 7532 | 0.113776 | TGTGACCTACTCCCTCCGTT | 59.886 | 55.000 | 0.00 | 0.00 | 0.00 | 4.44 |
7227 | 7533 | 0.816373 | GTGACCTACTCCCTCCGTTC | 59.184 | 60.000 | 0.00 | 0.00 | 0.00 | 3.95 |
7228 | 7534 | 0.324091 | TGACCTACTCCCTCCGTTCC | 60.324 | 60.000 | 0.00 | 0.00 | 0.00 | 3.62 |
7229 | 7535 | 0.033306 | GACCTACTCCCTCCGTTCCT | 60.033 | 60.000 | 0.00 | 0.00 | 0.00 | 3.36 |
7230 | 7536 | 1.213926 | GACCTACTCCCTCCGTTCCTA | 59.786 | 57.143 | 0.00 | 0.00 | 0.00 | 2.94 |
7231 | 7537 | 1.642762 | ACCTACTCCCTCCGTTCCTAA | 59.357 | 52.381 | 0.00 | 0.00 | 0.00 | 2.69 |
7232 | 7538 | 2.043526 | ACCTACTCCCTCCGTTCCTAAA | 59.956 | 50.000 | 0.00 | 0.00 | 0.00 | 1.85 |
7233 | 7539 | 3.306613 | CCTACTCCCTCCGTTCCTAAAT | 58.693 | 50.000 | 0.00 | 0.00 | 0.00 | 1.40 |
7234 | 7540 | 4.078980 | ACCTACTCCCTCCGTTCCTAAATA | 60.079 | 45.833 | 0.00 | 0.00 | 0.00 | 1.40 |
7235 | 7541 | 4.280425 | CCTACTCCCTCCGTTCCTAAATAC | 59.720 | 50.000 | 0.00 | 0.00 | 0.00 | 1.89 |
7236 | 7542 | 3.991683 | ACTCCCTCCGTTCCTAAATACT | 58.008 | 45.455 | 0.00 | 0.00 | 0.00 | 2.12 |
7237 | 7543 | 4.359996 | ACTCCCTCCGTTCCTAAATACTT | 58.640 | 43.478 | 0.00 | 0.00 | 0.00 | 2.24 |
7238 | 7544 | 4.161754 | ACTCCCTCCGTTCCTAAATACTTG | 59.838 | 45.833 | 0.00 | 0.00 | 0.00 | 3.16 |
7239 | 7545 | 4.098894 | TCCCTCCGTTCCTAAATACTTGT | 58.901 | 43.478 | 0.00 | 0.00 | 0.00 | 3.16 |
7240 | 7546 | 4.161001 | TCCCTCCGTTCCTAAATACTTGTC | 59.839 | 45.833 | 0.00 | 0.00 | 0.00 | 3.18 |
7241 | 7547 | 4.161754 | CCCTCCGTTCCTAAATACTTGTCT | 59.838 | 45.833 | 0.00 | 0.00 | 0.00 | 3.41 |
7242 | 7548 | 5.338137 | CCCTCCGTTCCTAAATACTTGTCTT | 60.338 | 44.000 | 0.00 | 0.00 | 0.00 | 3.01 |
7243 | 7549 | 6.171213 | CCTCCGTTCCTAAATACTTGTCTTT | 58.829 | 40.000 | 0.00 | 0.00 | 0.00 | 2.52 |
7244 | 7550 | 6.313164 | CCTCCGTTCCTAAATACTTGTCTTTC | 59.687 | 42.308 | 0.00 | 0.00 | 0.00 | 2.62 |
7245 | 7551 | 7.001099 | TCCGTTCCTAAATACTTGTCTTTCT | 57.999 | 36.000 | 0.00 | 0.00 | 0.00 | 2.52 |
7246 | 7552 | 8.125978 | TCCGTTCCTAAATACTTGTCTTTCTA | 57.874 | 34.615 | 0.00 | 0.00 | 0.00 | 2.10 |
7247 | 7553 | 8.248945 | TCCGTTCCTAAATACTTGTCTTTCTAG | 58.751 | 37.037 | 0.00 | 0.00 | 0.00 | 2.43 |
7248 | 7554 | 7.491696 | CCGTTCCTAAATACTTGTCTTTCTAGG | 59.508 | 40.741 | 0.00 | 0.00 | 0.00 | 3.02 |
7249 | 7555 | 7.010275 | CGTTCCTAAATACTTGTCTTTCTAGGC | 59.990 | 40.741 | 0.00 | 0.00 | 0.00 | 3.93 |
7250 | 7556 | 7.490657 | TCCTAAATACTTGTCTTTCTAGGCA | 57.509 | 36.000 | 0.00 | 0.00 | 33.22 | 4.75 |
7251 | 7557 | 8.090788 | TCCTAAATACTTGTCTTTCTAGGCAT | 57.909 | 34.615 | 0.00 | 0.00 | 35.56 | 4.40 |
7252 | 7558 | 8.548877 | TCCTAAATACTTGTCTTTCTAGGCATT | 58.451 | 33.333 | 0.00 | 0.00 | 35.56 | 3.56 |
7253 | 7559 | 9.178758 | CCTAAATACTTGTCTTTCTAGGCATTT | 57.821 | 33.333 | 0.00 | 0.00 | 35.56 | 2.32 |
7255 | 7561 | 8.635765 | AAATACTTGTCTTTCTAGGCATTTCA | 57.364 | 30.769 | 0.00 | 0.00 | 35.56 | 2.69 |
7256 | 7562 | 8.635765 | AATACTTGTCTTTCTAGGCATTTCAA | 57.364 | 30.769 | 0.00 | 0.00 | 35.56 | 2.69 |
7257 | 7563 | 6.319141 | ACTTGTCTTTCTAGGCATTTCAAC | 57.681 | 37.500 | 0.00 | 0.00 | 35.56 | 3.18 |
7258 | 7564 | 5.827797 | ACTTGTCTTTCTAGGCATTTCAACA | 59.172 | 36.000 | 0.00 | 0.00 | 35.56 | 3.33 |
7259 | 7565 | 6.321181 | ACTTGTCTTTCTAGGCATTTCAACAA | 59.679 | 34.615 | 0.00 | 0.00 | 35.56 | 2.83 |
7260 | 7566 | 6.317789 | TGTCTTTCTAGGCATTTCAACAAG | 57.682 | 37.500 | 0.00 | 0.00 | 29.10 | 3.16 |
7261 | 7567 | 5.827797 | TGTCTTTCTAGGCATTTCAACAAGT | 59.172 | 36.000 | 0.00 | 0.00 | 29.10 | 3.16 |
7262 | 7568 | 6.145535 | GTCTTTCTAGGCATTTCAACAAGTG | 58.854 | 40.000 | 0.00 | 0.00 | 0.00 | 3.16 |
7263 | 7569 | 6.017109 | GTCTTTCTAGGCATTTCAACAAGTGA | 60.017 | 38.462 | 0.00 | 0.00 | 0.00 | 3.41 |
7264 | 7570 | 5.689383 | TTCTAGGCATTTCAACAAGTGAC | 57.311 | 39.130 | 0.00 | 0.00 | 35.39 | 3.67 |
7265 | 7571 | 4.973168 | TCTAGGCATTTCAACAAGTGACT | 58.027 | 39.130 | 0.00 | 0.00 | 40.60 | 3.41 |
7266 | 7572 | 6.109156 | TCTAGGCATTTCAACAAGTGACTA | 57.891 | 37.500 | 0.00 | 0.00 | 38.51 | 2.59 |
7267 | 7573 | 5.932303 | TCTAGGCATTTCAACAAGTGACTAC | 59.068 | 40.000 | 0.00 | 0.00 | 38.51 | 2.73 |
7268 | 7574 | 4.460263 | AGGCATTTCAACAAGTGACTACA | 58.540 | 39.130 | 0.00 | 0.00 | 35.84 | 2.74 |
7269 | 7575 | 5.072741 | AGGCATTTCAACAAGTGACTACAT | 58.927 | 37.500 | 0.00 | 0.00 | 35.84 | 2.29 |
7270 | 7576 | 6.237901 | AGGCATTTCAACAAGTGACTACATA | 58.762 | 36.000 | 0.00 | 0.00 | 35.84 | 2.29 |
7271 | 7577 | 6.149474 | AGGCATTTCAACAAGTGACTACATAC | 59.851 | 38.462 | 0.00 | 0.00 | 35.84 | 2.39 |
7272 | 7578 | 6.015504 | GCATTTCAACAAGTGACTACATACG | 58.984 | 40.000 | 0.00 | 0.00 | 35.39 | 3.06 |
7273 | 7579 | 6.534059 | CATTTCAACAAGTGACTACATACGG | 58.466 | 40.000 | 0.00 | 0.00 | 35.39 | 4.02 |
7274 | 7580 | 5.456548 | TTCAACAAGTGACTACATACGGA | 57.543 | 39.130 | 0.00 | 0.00 | 35.39 | 4.69 |
7275 | 7581 | 5.055642 | TCAACAAGTGACTACATACGGAG | 57.944 | 43.478 | 0.00 | 0.00 | 0.00 | 4.63 |
7276 | 7582 | 3.505464 | ACAAGTGACTACATACGGAGC | 57.495 | 47.619 | 0.00 | 0.00 | 0.00 | 4.70 |
7277 | 7583 | 2.823747 | ACAAGTGACTACATACGGAGCA | 59.176 | 45.455 | 0.00 | 0.00 | 0.00 | 4.26 |
7278 | 7584 | 3.257375 | ACAAGTGACTACATACGGAGCAA | 59.743 | 43.478 | 0.00 | 0.00 | 0.00 | 3.91 |
7279 | 7585 | 4.242475 | CAAGTGACTACATACGGAGCAAA | 58.758 | 43.478 | 0.00 | 0.00 | 0.00 | 3.68 |
7280 | 7586 | 4.530710 | AGTGACTACATACGGAGCAAAA | 57.469 | 40.909 | 0.00 | 0.00 | 0.00 | 2.44 |
7281 | 7587 | 5.086104 | AGTGACTACATACGGAGCAAAAT | 57.914 | 39.130 | 0.00 | 0.00 | 0.00 | 1.82 |
7282 | 7588 | 4.870426 | AGTGACTACATACGGAGCAAAATG | 59.130 | 41.667 | 0.00 | 0.00 | 0.00 | 2.32 |
7283 | 7589 | 4.868171 | GTGACTACATACGGAGCAAAATGA | 59.132 | 41.667 | 0.00 | 0.00 | 0.00 | 2.57 |
7284 | 7590 | 5.005779 | GTGACTACATACGGAGCAAAATGAG | 59.994 | 44.000 | 0.00 | 0.00 | 0.00 | 2.90 |
7285 | 7591 | 5.086104 | ACTACATACGGAGCAAAATGAGT | 57.914 | 39.130 | 0.00 | 0.00 | 0.00 | 3.41 |
7286 | 7592 | 4.870426 | ACTACATACGGAGCAAAATGAGTG | 59.130 | 41.667 | 0.00 | 0.00 | 0.00 | 3.51 |
7287 | 7593 | 3.937814 | ACATACGGAGCAAAATGAGTGA | 58.062 | 40.909 | 0.00 | 0.00 | 0.00 | 3.41 |
7288 | 7594 | 4.323417 | ACATACGGAGCAAAATGAGTGAA | 58.677 | 39.130 | 0.00 | 0.00 | 0.00 | 3.18 |
7289 | 7595 | 4.943705 | ACATACGGAGCAAAATGAGTGAAT | 59.056 | 37.500 | 0.00 | 0.00 | 0.00 | 2.57 |
7290 | 7596 | 5.065218 | ACATACGGAGCAAAATGAGTGAATC | 59.935 | 40.000 | 0.00 | 0.00 | 0.00 | 2.52 |
7291 | 7597 | 3.679389 | ACGGAGCAAAATGAGTGAATCT | 58.321 | 40.909 | 0.00 | 0.00 | 0.00 | 2.40 |
7292 | 7598 | 4.832248 | ACGGAGCAAAATGAGTGAATCTA | 58.168 | 39.130 | 0.00 | 0.00 | 0.00 | 1.98 |
7293 | 7599 | 4.631813 | ACGGAGCAAAATGAGTGAATCTAC | 59.368 | 41.667 | 0.00 | 0.00 | 0.00 | 2.59 |
7294 | 7600 | 4.631377 | CGGAGCAAAATGAGTGAATCTACA | 59.369 | 41.667 | 0.00 | 0.00 | 0.00 | 2.74 |
7295 | 7601 | 5.446473 | CGGAGCAAAATGAGTGAATCTACAC | 60.446 | 44.000 | 0.00 | 0.00 | 40.60 | 2.90 |
7304 | 7610 | 2.893637 | GTGAATCTACACTGCATCCGT | 58.106 | 47.619 | 0.00 | 0.00 | 37.73 | 4.69 |
7305 | 7611 | 4.041740 | GTGAATCTACACTGCATCCGTA | 57.958 | 45.455 | 0.00 | 0.00 | 37.73 | 4.02 |
7306 | 7612 | 4.621991 | GTGAATCTACACTGCATCCGTAT | 58.378 | 43.478 | 0.00 | 0.00 | 37.73 | 3.06 |
7307 | 7613 | 4.445718 | GTGAATCTACACTGCATCCGTATG | 59.554 | 45.833 | 0.00 | 0.00 | 37.73 | 2.39 |
7308 | 7614 | 4.099419 | TGAATCTACACTGCATCCGTATGT | 59.901 | 41.667 | 0.00 | 0.00 | 35.38 | 2.29 |
7309 | 7615 | 5.300792 | TGAATCTACACTGCATCCGTATGTA | 59.699 | 40.000 | 0.00 | 0.00 | 35.38 | 2.29 |
7316 | 7622 | 4.830826 | CTGCATCCGTATGTAGTAGTCA | 57.169 | 45.455 | 0.00 | 0.00 | 40.02 | 3.41 |
7317 | 7623 | 5.378292 | CTGCATCCGTATGTAGTAGTCAT | 57.622 | 43.478 | 0.00 | 0.00 | 40.02 | 3.06 |
7318 | 7624 | 5.773575 | CTGCATCCGTATGTAGTAGTCATT | 58.226 | 41.667 | 0.00 | 0.00 | 40.02 | 2.57 |
7319 | 7625 | 6.156748 | TGCATCCGTATGTAGTAGTCATTT | 57.843 | 37.500 | 0.00 | 0.00 | 35.38 | 2.32 |
7320 | 7626 | 5.983118 | TGCATCCGTATGTAGTAGTCATTTG | 59.017 | 40.000 | 0.00 | 0.00 | 35.38 | 2.32 |
7321 | 7627 | 6.183360 | TGCATCCGTATGTAGTAGTCATTTGA | 60.183 | 38.462 | 0.00 | 0.00 | 35.38 | 2.69 |
7322 | 7628 | 6.700081 | GCATCCGTATGTAGTAGTCATTTGAA | 59.300 | 38.462 | 0.00 | 0.00 | 35.38 | 2.69 |
7323 | 7629 | 7.223971 | GCATCCGTATGTAGTAGTCATTTGAAA | 59.776 | 37.037 | 0.00 | 0.00 | 35.38 | 2.69 |
7324 | 7630 | 9.261180 | CATCCGTATGTAGTAGTCATTTGAAAT | 57.739 | 33.333 | 0.00 | 0.00 | 0.00 | 2.17 |
7325 | 7631 | 8.642908 | TCCGTATGTAGTAGTCATTTGAAATG | 57.357 | 34.615 | 11.54 | 11.54 | 0.00 | 2.32 |
7326 | 7632 | 8.255206 | TCCGTATGTAGTAGTCATTTGAAATGT | 58.745 | 33.333 | 16.62 | 2.38 | 0.00 | 2.71 |
7327 | 7633 | 8.540492 | CCGTATGTAGTAGTCATTTGAAATGTC | 58.460 | 37.037 | 16.62 | 11.74 | 0.00 | 3.06 |
7328 | 7634 | 9.302345 | CGTATGTAGTAGTCATTTGAAATGTCT | 57.698 | 33.333 | 18.62 | 18.62 | 0.00 | 3.41 |
7352 | 7658 | 8.248945 | TCTAGAAAGACAAGTATTTAGGAACGG | 58.751 | 37.037 | 0.00 | 0.00 | 0.00 | 4.44 |
7353 | 7659 | 7.001099 | AGAAAGACAAGTATTTAGGAACGGA | 57.999 | 36.000 | 0.00 | 0.00 | 0.00 | 4.69 |
7354 | 7660 | 7.097834 | AGAAAGACAAGTATTTAGGAACGGAG | 58.902 | 38.462 | 0.00 | 0.00 | 0.00 | 4.63 |
7355 | 7661 | 5.340439 | AGACAAGTATTTAGGAACGGAGG | 57.660 | 43.478 | 0.00 | 0.00 | 0.00 | 4.30 |
7356 | 7662 | 4.161754 | AGACAAGTATTTAGGAACGGAGGG | 59.838 | 45.833 | 0.00 | 0.00 | 0.00 | 4.30 |
7357 | 7663 | 4.098894 | ACAAGTATTTAGGAACGGAGGGA | 58.901 | 43.478 | 0.00 | 0.00 | 0.00 | 4.20 |
7362 | 7668 | 2.905415 | TTAGGAACGGAGGGAGTACA | 57.095 | 50.000 | 0.00 | 0.00 | 0.00 | 2.90 |
7409 | 7715 | 6.770785 | GGGAACATCTATATACAACTGCCAAA | 59.229 | 38.462 | 0.00 | 0.00 | 0.00 | 3.28 |
7420 | 7726 | 3.706086 | ACAACTGCCAAATGAAAGGTCTT | 59.294 | 39.130 | 0.00 | 0.00 | 0.00 | 3.01 |
7426 | 7734 | 3.758554 | GCCAAATGAAAGGTCTTGAGCTA | 59.241 | 43.478 | 2.63 | 0.00 | 0.00 | 3.32 |
7495 | 7804 | 2.637025 | CGACACAAACTTGCGGGG | 59.363 | 61.111 | 0.00 | 0.00 | 0.00 | 5.73 |
7500 | 7809 | 0.457851 | CACAAACTTGCGGGGAAACA | 59.542 | 50.000 | 0.00 | 0.00 | 0.00 | 2.83 |
7510 | 7819 | 2.224670 | TGCGGGGAAACAAGACTGTTAT | 60.225 | 45.455 | 0.00 | 0.00 | 45.25 | 1.89 |
7512 | 7821 | 3.119955 | GCGGGGAAACAAGACTGTTATTC | 60.120 | 47.826 | 0.00 | 0.00 | 45.25 | 1.75 |
7529 | 7838 | 3.367743 | CACATGCAGCAAGGCGGT | 61.368 | 61.111 | 0.00 | 0.00 | 36.28 | 5.68 |
7755 | 8064 | 4.414677 | CATCTATCTGGATCACCTGGAGA | 58.585 | 47.826 | 0.00 | 0.00 | 36.08 | 3.71 |
7792 | 8106 | 3.033184 | CTGGTCGGTAATAACAGGGGTA | 58.967 | 50.000 | 0.00 | 0.00 | 0.00 | 3.69 |
7797 | 8111 | 6.010219 | GGTCGGTAATAACAGGGGTACTATA | 58.990 | 44.000 | 0.00 | 0.00 | 0.00 | 1.31 |
7799 | 8113 | 7.179160 | GGTCGGTAATAACAGGGGTACTATATT | 59.821 | 40.741 | 0.00 | 0.00 | 0.00 | 1.28 |
7886 | 8200 | 1.400242 | GCAGCGACCATGTCTTGAAAC | 60.400 | 52.381 | 0.00 | 0.00 | 0.00 | 2.78 |
7934 | 8248 | 0.108138 | CTACCTGCTTCCTTGACGGG | 60.108 | 60.000 | 0.00 | 0.00 | 35.85 | 5.28 |
7938 | 8252 | 0.951040 | CTGCTTCCTTGACGGGACAC | 60.951 | 60.000 | 0.00 | 0.00 | 34.78 | 3.67 |
8014 | 8328 | 1.272490 | TCTAGTCTCAAACACCGCCTG | 59.728 | 52.381 | 0.00 | 0.00 | 0.00 | 4.85 |
8033 | 8347 | 3.465742 | TGCAAAGCAGCAAAACCATAA | 57.534 | 38.095 | 0.00 | 0.00 | 42.46 | 1.90 |
8042 | 8356 | 3.369756 | CAGCAAAACCATAAGCAAGCATG | 59.630 | 43.478 | 0.00 | 0.00 | 0.00 | 4.06 |
8043 | 8357 | 3.007182 | AGCAAAACCATAAGCAAGCATGT | 59.993 | 39.130 | 0.00 | 0.00 | 0.00 | 3.21 |
8044 | 8358 | 3.368843 | GCAAAACCATAAGCAAGCATGTC | 59.631 | 43.478 | 0.00 | 0.00 | 0.00 | 3.06 |
8045 | 8359 | 3.492421 | AAACCATAAGCAAGCATGTCG | 57.508 | 42.857 | 0.00 | 0.00 | 0.00 | 4.35 |
8046 | 8360 | 2.401583 | ACCATAAGCAAGCATGTCGA | 57.598 | 45.000 | 0.00 | 0.00 | 0.00 | 4.20 |
8047 | 8361 | 2.923121 | ACCATAAGCAAGCATGTCGAT | 58.077 | 42.857 | 0.00 | 0.00 | 0.00 | 3.59 |
8048 | 8362 | 2.615447 | ACCATAAGCAAGCATGTCGATG | 59.385 | 45.455 | 0.00 | 0.00 | 0.00 | 3.84 |
8049 | 8363 | 2.615447 | CCATAAGCAAGCATGTCGATGT | 59.385 | 45.455 | 0.00 | 0.00 | 31.50 | 3.06 |
8050 | 8364 | 3.065786 | CCATAAGCAAGCATGTCGATGTT | 59.934 | 43.478 | 0.00 | 0.00 | 31.50 | 2.71 |
8051 | 8365 | 4.273235 | CCATAAGCAAGCATGTCGATGTTA | 59.727 | 41.667 | 0.00 | 0.00 | 31.50 | 2.41 |
8052 | 8366 | 3.747099 | AAGCAAGCATGTCGATGTTAC | 57.253 | 42.857 | 0.00 | 0.00 | 31.50 | 2.50 |
8053 | 8367 | 2.977914 | AGCAAGCATGTCGATGTTACT | 58.022 | 42.857 | 0.00 | 0.00 | 31.50 | 2.24 |
8054 | 8368 | 2.932614 | AGCAAGCATGTCGATGTTACTC | 59.067 | 45.455 | 0.00 | 0.00 | 31.50 | 2.59 |
8055 | 8369 | 2.672874 | GCAAGCATGTCGATGTTACTCA | 59.327 | 45.455 | 0.00 | 0.00 | 31.50 | 3.41 |
8056 | 8370 | 3.310774 | GCAAGCATGTCGATGTTACTCAT | 59.689 | 43.478 | 0.00 | 0.00 | 39.77 | 2.90 |
8057 | 8371 | 4.551603 | GCAAGCATGTCGATGTTACTCATC | 60.552 | 45.833 | 0.00 | 0.00 | 46.68 | 2.92 |
8081 | 8395 | 7.894708 | TCATTTCTGATTTAAATGACTTGGCA | 58.105 | 30.769 | 5.17 | 0.00 | 44.39 | 4.92 |
8082 | 8396 | 8.366401 | TCATTTCTGATTTAAATGACTTGGCAA | 58.634 | 29.630 | 5.17 | 0.00 | 44.39 | 4.52 |
8083 | 8397 | 9.158233 | CATTTCTGATTTAAATGACTTGGCAAT | 57.842 | 29.630 | 5.17 | 0.00 | 43.79 | 3.56 |
8086 | 8400 | 9.638239 | TTCTGATTTAAATGACTTGGCAATAAC | 57.362 | 29.630 | 5.17 | 0.00 | 0.00 | 1.89 |
8087 | 8401 | 8.801299 | TCTGATTTAAATGACTTGGCAATAACA | 58.199 | 29.630 | 5.17 | 1.94 | 0.00 | 2.41 |
8088 | 8402 | 9.421806 | CTGATTTAAATGACTTGGCAATAACAA | 57.578 | 29.630 | 5.17 | 0.00 | 0.00 | 2.83 |
8089 | 8403 | 9.770097 | TGATTTAAATGACTTGGCAATAACAAA | 57.230 | 25.926 | 5.17 | 0.00 | 0.00 | 2.83 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
64 | 67 | 9.620259 | ATCAGATCTATACTAAGTATGCATCGA | 57.380 | 33.333 | 0.19 | 0.00 | 30.19 | 3.59 |
101 | 104 | 6.323996 | CCATGAGTACTCATCCAAAGTACCTA | 59.676 | 42.308 | 31.17 | 3.94 | 46.57 | 3.08 |
102 | 105 | 5.129485 | CCATGAGTACTCATCCAAAGTACCT | 59.871 | 44.000 | 31.17 | 8.25 | 46.57 | 3.08 |
103 | 106 | 5.104900 | ACCATGAGTACTCATCCAAAGTACC | 60.105 | 44.000 | 31.17 | 0.00 | 46.57 | 3.34 |
189 | 192 | 1.153107 | CATTGGCGGGATCAGCTGA | 60.153 | 57.895 | 20.79 | 20.79 | 34.52 | 4.26 |
261 | 264 | 2.627217 | CCTGGGAGCCTCCTAACTACTT | 60.627 | 54.545 | 11.29 | 0.00 | 36.57 | 2.24 |
290 | 293 | 7.394016 | TGATAACTAGATCAAAAAGGCACAGA | 58.606 | 34.615 | 0.00 | 0.00 | 32.84 | 3.41 |
302 | 305 | 9.645059 | GCTAGCATAACAATGATAACTAGATCA | 57.355 | 33.333 | 10.63 | 0.00 | 40.08 | 2.92 |
581 | 587 | 1.548357 | AAGGGAGAGCAGTGCGACAT | 61.548 | 55.000 | 10.00 | 0.00 | 0.00 | 3.06 |
597 | 605 | 2.103941 | GGGAGAGAAGCCATACTCAAGG | 59.896 | 54.545 | 0.00 | 0.00 | 35.83 | 3.61 |
660 | 668 | 1.512694 | GTAACCCTACCACGACCCG | 59.487 | 63.158 | 0.00 | 0.00 | 0.00 | 5.28 |
683 | 691 | 4.637534 | CGAGACATTTGGTTGGATCAGATT | 59.362 | 41.667 | 0.00 | 0.00 | 0.00 | 2.40 |
747 | 756 | 4.992511 | TCGCCGTTGTTTCCCCGG | 62.993 | 66.667 | 0.00 | 0.00 | 44.46 | 5.73 |
814 | 823 | 5.240183 | GCATATCTCAAGGCTTTATTGCTCA | 59.760 | 40.000 | 0.00 | 0.00 | 0.00 | 4.26 |
862 | 871 | 6.381481 | TGTTCATGGATAGCTTGCATTTAG | 57.619 | 37.500 | 0.00 | 0.00 | 33.53 | 1.85 |
866 | 875 | 3.635373 | CCTTGTTCATGGATAGCTTGCAT | 59.365 | 43.478 | 0.00 | 0.00 | 36.74 | 3.96 |
873 | 882 | 3.824133 | TCATGCCCTTGTTCATGGATAG | 58.176 | 45.455 | 6.34 | 0.00 | 40.20 | 2.08 |
903 | 912 | 5.817816 | CACCGTATGCTATTTTCCTTCTCTT | 59.182 | 40.000 | 0.00 | 0.00 | 0.00 | 2.85 |
984 | 994 | 2.721859 | CTGCGGATCATCGGTCGA | 59.278 | 61.111 | 0.00 | 0.00 | 0.00 | 4.20 |
988 | 998 | 2.356793 | GAGGCTGCGGATCATCGG | 60.357 | 66.667 | 0.00 | 0.00 | 0.00 | 4.18 |
1014 | 1024 | 0.462789 | AGTTATAGAACACGGGGGCG | 59.537 | 55.000 | 2.62 | 0.00 | 38.10 | 6.13 |
1248 | 1259 | 0.748367 | GGAGAAACCGGCCCTGATTC | 60.748 | 60.000 | 0.00 | 0.00 | 0.00 | 2.52 |
1274 | 1292 | 2.044352 | CCACCCCGAACCATTCCC | 60.044 | 66.667 | 0.00 | 0.00 | 0.00 | 3.97 |
1285 | 1303 | 2.614013 | ACCTCCACATCCCACCCC | 60.614 | 66.667 | 0.00 | 0.00 | 0.00 | 4.95 |
1289 | 1307 | 2.300967 | GCCAGACCTCCACATCCCA | 61.301 | 63.158 | 0.00 | 0.00 | 0.00 | 4.37 |
1291 | 1309 | 2.187946 | CGCCAGACCTCCACATCC | 59.812 | 66.667 | 0.00 | 0.00 | 0.00 | 3.51 |
1304 | 1324 | 4.750695 | TTCCCTGATCCCCCGCCA | 62.751 | 66.667 | 0.00 | 0.00 | 0.00 | 5.69 |
1384 | 1404 | 1.758936 | ATCGAACCCCGGGAAAAATC | 58.241 | 50.000 | 26.32 | 11.33 | 39.14 | 2.17 |
1418 | 1438 | 4.739716 | ACAAAGAACAAAATGCTAACTGCG | 59.260 | 37.500 | 0.00 | 0.00 | 46.63 | 5.18 |
1423 | 1443 | 9.598517 | AGATTGAAACAAAGAACAAAATGCTAA | 57.401 | 25.926 | 0.00 | 0.00 | 0.00 | 3.09 |
1444 | 1464 | 6.109359 | ACCCAAATCTAGTCGAGAAAGATTG | 58.891 | 40.000 | 14.32 | 10.02 | 39.34 | 2.67 |
1485 | 1505 | 3.053395 | ACCCATACCATTCATTCACAGCT | 60.053 | 43.478 | 0.00 | 0.00 | 0.00 | 4.24 |
1619 | 1639 | 7.623999 | ATCAGACCCTCACTATGATTACAAT | 57.376 | 36.000 | 0.00 | 0.00 | 0.00 | 2.71 |
1665 | 1685 | 7.203255 | ACTGGCACTTCTCTGTATTTTTAAC | 57.797 | 36.000 | 0.00 | 0.00 | 0.00 | 2.01 |
2131 | 2159 | 8.239314 | ACAACAATATGAACTTCATGATGACAC | 58.761 | 33.333 | 15.03 | 6.56 | 37.70 | 3.67 |
2139 | 2167 | 6.886459 | ACCAGCTACAACAATATGAACTTCAT | 59.114 | 34.615 | 9.26 | 9.26 | 40.72 | 2.57 |
2185 | 2213 | 9.499479 | GTGATTTATTATGATCTCCATGTGAGT | 57.501 | 33.333 | 9.98 | 0.67 | 42.12 | 3.41 |
2471 | 2499 | 4.876107 | GCTTATTTCTCCTCGATTGACCAA | 59.124 | 41.667 | 0.00 | 0.00 | 0.00 | 3.67 |
2472 | 2500 | 4.081142 | TGCTTATTTCTCCTCGATTGACCA | 60.081 | 41.667 | 0.00 | 0.00 | 0.00 | 4.02 |
2473 | 2501 | 4.442706 | TGCTTATTTCTCCTCGATTGACC | 58.557 | 43.478 | 0.00 | 0.00 | 0.00 | 4.02 |
2474 | 2502 | 4.025313 | GCTGCTTATTTCTCCTCGATTGAC | 60.025 | 45.833 | 0.00 | 0.00 | 0.00 | 3.18 |
2475 | 2503 | 4.122776 | GCTGCTTATTTCTCCTCGATTGA | 58.877 | 43.478 | 0.00 | 0.00 | 0.00 | 2.57 |
2476 | 2504 | 4.025061 | CAGCTGCTTATTTCTCCTCGATTG | 60.025 | 45.833 | 0.00 | 0.00 | 0.00 | 2.67 |
2477 | 2505 | 4.125703 | CAGCTGCTTATTTCTCCTCGATT | 58.874 | 43.478 | 0.00 | 0.00 | 0.00 | 3.34 |
2478 | 2506 | 3.726607 | CAGCTGCTTATTTCTCCTCGAT | 58.273 | 45.455 | 0.00 | 0.00 | 0.00 | 3.59 |
2479 | 2507 | 2.739932 | GCAGCTGCTTATTTCTCCTCGA | 60.740 | 50.000 | 31.33 | 0.00 | 38.21 | 4.04 |
2480 | 2508 | 1.596727 | GCAGCTGCTTATTTCTCCTCG | 59.403 | 52.381 | 31.33 | 0.00 | 38.21 | 4.63 |
2487 | 2515 | 9.075712 | TACAAAAGTGTCAGCAGCTGCTTATTT | 62.076 | 37.037 | 38.08 | 26.77 | 43.38 | 1.40 |
2488 | 2516 | 7.684111 | TACAAAAGTGTCAGCAGCTGCTTATT | 61.684 | 38.462 | 38.08 | 23.13 | 43.38 | 1.40 |
2489 | 2517 | 6.261463 | TACAAAAGTGTCAGCAGCTGCTTAT | 61.261 | 40.000 | 38.08 | 16.47 | 43.38 | 1.73 |
2490 | 2518 | 4.981845 | TACAAAAGTGTCAGCAGCTGCTTA | 60.982 | 41.667 | 38.08 | 28.39 | 43.38 | 3.09 |
2491 | 2519 | 4.243039 | TACAAAAGTGTCAGCAGCTGCTT | 61.243 | 43.478 | 38.08 | 21.29 | 43.38 | 3.91 |
2492 | 2520 | 2.746142 | TACAAAAGTGTCAGCAGCTGCT | 60.746 | 45.455 | 35.32 | 35.32 | 45.27 | 4.24 |
2493 | 2521 | 0.383231 | ACAAAAGTGTCAGCAGCTGC | 59.617 | 50.000 | 31.53 | 31.53 | 35.34 | 5.25 |
2494 | 2522 | 2.225019 | CCTACAAAAGTGTCAGCAGCTG | 59.775 | 50.000 | 17.10 | 17.10 | 39.30 | 4.24 |
2495 | 2523 | 2.158755 | ACCTACAAAAGTGTCAGCAGCT | 60.159 | 45.455 | 0.00 | 0.00 | 39.30 | 4.24 |
2496 | 2524 | 2.031682 | CACCTACAAAAGTGTCAGCAGC | 60.032 | 50.000 | 0.00 | 0.00 | 39.30 | 5.25 |
2497 | 2525 | 2.549754 | CCACCTACAAAAGTGTCAGCAG | 59.450 | 50.000 | 0.00 | 0.00 | 39.30 | 4.24 |
2498 | 2526 | 2.571212 | CCACCTACAAAAGTGTCAGCA | 58.429 | 47.619 | 0.00 | 0.00 | 39.30 | 4.41 |
2499 | 2527 | 1.880027 | CCCACCTACAAAAGTGTCAGC | 59.120 | 52.381 | 0.00 | 0.00 | 39.30 | 4.26 |
2500 | 2528 | 1.880027 | GCCCACCTACAAAAGTGTCAG | 59.120 | 52.381 | 0.00 | 0.00 | 39.30 | 3.51 |
2501 | 2529 | 1.477923 | GGCCCACCTACAAAAGTGTCA | 60.478 | 52.381 | 0.00 | 0.00 | 39.30 | 3.58 |
2502 | 2530 | 1.244816 | GGCCCACCTACAAAAGTGTC | 58.755 | 55.000 | 0.00 | 0.00 | 39.30 | 3.67 |
2663 | 2691 | 4.380531 | TGACAGTTTTGTGCTTCTCTAGG | 58.619 | 43.478 | 0.00 | 0.00 | 37.76 | 3.02 |
2680 | 2708 | 2.943033 | ACAAGAAGTCCGGTTTTGACAG | 59.057 | 45.455 | 0.00 | 0.00 | 35.15 | 3.51 |
2690 | 2718 | 4.681942 | CAGAGAACTACAACAAGAAGTCCG | 59.318 | 45.833 | 0.00 | 0.00 | 0.00 | 4.79 |
2890 | 2918 | 1.070134 | ACCAGTAGCTCGAACTTGCAA | 59.930 | 47.619 | 0.00 | 0.00 | 0.00 | 4.08 |
2963 | 2991 | 7.928908 | CACAAGCACATGTGTTTAAATACTT | 57.071 | 32.000 | 24.94 | 14.68 | 44.46 | 2.24 |
3091 | 3127 | 1.480545 | ACCATACAGTGCATCGTGCTA | 59.519 | 47.619 | 10.54 | 0.00 | 45.31 | 3.49 |
3351 | 3387 | 9.722056 | CAGAACCTGTATAGAAATAAATTGTGC | 57.278 | 33.333 | 0.00 | 0.00 | 0.00 | 4.57 |
3482 | 3518 | 3.681593 | TCCAATTCCACCAATGCAAAG | 57.318 | 42.857 | 0.00 | 0.00 | 0.00 | 2.77 |
3619 | 3655 | 7.097834 | ACAGTTACTAACCTGTCATAGAAAGC | 58.902 | 38.462 | 0.00 | 0.00 | 0.00 | 3.51 |
3639 | 3675 | 3.850173 | ACCCCCTGTATATGTTGACAGTT | 59.150 | 43.478 | 3.33 | 0.00 | 41.28 | 3.16 |
3656 | 3692 | 2.422597 | GCAAAGCACAATTTTACCCCC | 58.577 | 47.619 | 0.00 | 0.00 | 0.00 | 5.40 |
3726 | 3762 | 4.494091 | ACATAGCTTCACTGCCTGTAAT | 57.506 | 40.909 | 0.00 | 0.00 | 30.79 | 1.89 |
3880 | 3916 | 3.279116 | CACACAGCACCACACCCG | 61.279 | 66.667 | 0.00 | 0.00 | 0.00 | 5.28 |
4064 | 4100 | 6.103330 | ACAATTTGGTACACAACAAAGAACC | 58.897 | 36.000 | 0.78 | 0.00 | 39.29 | 3.62 |
4379 | 4418 | 3.880490 | TGGAGTCATAAAAACTTGTGCGT | 59.120 | 39.130 | 0.00 | 0.00 | 0.00 | 5.24 |
4434 | 4473 | 2.245438 | GAAGGAGCGAAGGTGAGGGG | 62.245 | 65.000 | 0.00 | 0.00 | 39.88 | 4.79 |
4444 | 4483 | 0.039764 | TTGGAGAGAGGAAGGAGCGA | 59.960 | 55.000 | 0.00 | 0.00 | 0.00 | 4.93 |
4613 | 4652 | 3.745975 | TCGATGTGTGAACAATCTTCACC | 59.254 | 43.478 | 10.02 | 3.69 | 46.01 | 4.02 |
4769 | 4808 | 9.322773 | CTATGTGCAAGAAAGATCTTAATCTCA | 57.677 | 33.333 | 8.75 | 3.91 | 44.11 | 3.27 |
4964 | 5003 | 6.751888 | CGGTTTCAATGGATCCAAAGAATAAC | 59.248 | 38.462 | 24.51 | 20.81 | 0.00 | 1.89 |
4973 | 5012 | 2.577606 | ACACGGTTTCAATGGATCCA | 57.422 | 45.000 | 18.88 | 18.88 | 0.00 | 3.41 |
5020 | 5059 | 2.592308 | GCACCCATCCTCCCTGAC | 59.408 | 66.667 | 0.00 | 0.00 | 0.00 | 3.51 |
5942 | 5981 | 3.446968 | ACCACCAGGCTACACATAGTAA | 58.553 | 45.455 | 0.00 | 0.00 | 39.06 | 2.24 |
5962 | 6001 | 3.123050 | GCCCACATTGTGAACAAAAGAC | 58.877 | 45.455 | 18.33 | 0.00 | 39.55 | 3.01 |
6041 | 6080 | 4.634012 | TCCAAATGGTATCCGAATAGGG | 57.366 | 45.455 | 0.00 | 0.00 | 37.23 | 3.53 |
6046 | 6085 | 4.764823 | GGCATTATCCAAATGGTATCCGAA | 59.235 | 41.667 | 0.00 | 0.00 | 36.34 | 4.30 |
6049 | 6088 | 6.012745 | AGAAGGCATTATCCAAATGGTATCC | 58.987 | 40.000 | 0.00 | 0.00 | 36.34 | 2.59 |
6117 | 6342 | 5.405935 | AAAGGATGTTTTATGACCCTTGC | 57.594 | 39.130 | 0.00 | 0.00 | 34.57 | 4.01 |
6155 | 6417 | 4.089361 | TGACAGATGAAACTAGCAGAGGA | 58.911 | 43.478 | 0.00 | 0.00 | 0.00 | 3.71 |
6160 | 6422 | 6.767902 | GGGAATAATGACAGATGAAACTAGCA | 59.232 | 38.462 | 0.00 | 0.00 | 0.00 | 3.49 |
6202 | 6464 | 8.284693 | AGTTTACGTACAATTTATGTCCAACAC | 58.715 | 33.333 | 0.00 | 0.00 | 42.70 | 3.32 |
6204 | 6466 | 9.667989 | AAAGTTTACGTACAATTTATGTCCAAC | 57.332 | 29.630 | 5.44 | 0.00 | 42.70 | 3.77 |
6254 | 6517 | 5.165961 | TCCAGACTACCTTTTTCATCCAG | 57.834 | 43.478 | 0.00 | 0.00 | 0.00 | 3.86 |
6304 | 6568 | 6.236017 | TGTATAAAGCAGGTGACTTTTTCG | 57.764 | 37.500 | 0.00 | 0.00 | 40.21 | 3.46 |
6338 | 6620 | 8.497745 | ACAGGAATATTACTTCTTCACCATGAT | 58.502 | 33.333 | 0.00 | 0.00 | 0.00 | 2.45 |
6360 | 6642 | 2.223805 | GCTTTTTGGACAGGAACACAGG | 60.224 | 50.000 | 0.00 | 0.00 | 0.00 | 4.00 |
6462 | 6752 | 6.433404 | GCACCTAGCATAGTATACCTACAGAA | 59.567 | 42.308 | 0.00 | 0.00 | 44.79 | 3.02 |
6582 | 6874 | 2.496070 | CTGACTACGAAATCAGGGGTCA | 59.504 | 50.000 | 0.00 | 0.00 | 38.97 | 4.02 |
6586 | 6878 | 4.655762 | TCATCTGACTACGAAATCAGGG | 57.344 | 45.455 | 12.38 | 7.38 | 42.25 | 4.45 |
6618 | 6910 | 6.752168 | ACTTTCAAAAGCAACAGCAATATCT | 58.248 | 32.000 | 2.43 | 0.00 | 39.63 | 1.98 |
6658 | 6950 | 9.357652 | CAATTCAGTTCAAGAAAGAAGAAACAA | 57.642 | 29.630 | 5.56 | 0.00 | 0.00 | 2.83 |
6689 | 6981 | 5.474876 | GGAAAATGTTTCTGATCAGACACCT | 59.525 | 40.000 | 29.99 | 21.67 | 37.33 | 4.00 |
6690 | 6982 | 5.474876 | AGGAAAATGTTTCTGATCAGACACC | 59.525 | 40.000 | 29.99 | 20.15 | 37.33 | 4.16 |
6691 | 6983 | 6.348868 | GGAGGAAAATGTTTCTGATCAGACAC | 60.349 | 42.308 | 27.75 | 27.75 | 38.32 | 3.67 |
6700 | 6992 | 4.588528 | TGGAAAGGGAGGAAAATGTTTCTG | 59.411 | 41.667 | 1.11 | 0.00 | 0.00 | 3.02 |
6706 | 6998 | 2.232208 | GCACTGGAAAGGGAGGAAAATG | 59.768 | 50.000 | 0.00 | 0.00 | 0.00 | 2.32 |
6728 | 7021 | 1.098050 | GCAATAGGGCTTCACAGGTG | 58.902 | 55.000 | 0.00 | 0.00 | 0.00 | 4.00 |
6757 | 7050 | 2.419324 | GAGATTGCAGCTTGAACTCCAG | 59.581 | 50.000 | 0.00 | 0.00 | 0.00 | 3.86 |
6758 | 7051 | 2.039480 | AGAGATTGCAGCTTGAACTCCA | 59.961 | 45.455 | 0.00 | 0.00 | 0.00 | 3.86 |
7007 | 7311 | 6.584471 | TTATACAGATTAAGGGGGAAAGCA | 57.416 | 37.500 | 0.00 | 0.00 | 0.00 | 3.91 |
7039 | 7343 | 3.118738 | CGCAGATAGGTTACAGGGAAAGT | 60.119 | 47.826 | 0.00 | 0.00 | 0.00 | 2.66 |
7154 | 7459 | 0.825010 | ACAGGGAGGCTTGCTTTGTG | 60.825 | 55.000 | 0.00 | 0.00 | 0.00 | 3.33 |
7188 | 7494 | 0.816373 | ACTTGTGTTGTGTGCATGCA | 59.184 | 45.000 | 18.46 | 18.46 | 0.00 | 3.96 |
7200 | 7506 | 1.692519 | GGGAGTAGGTCACACTTGTGT | 59.307 | 52.381 | 9.16 | 0.00 | 45.76 | 3.72 |
7201 | 7507 | 1.971357 | AGGGAGTAGGTCACACTTGTG | 59.029 | 52.381 | 2.75 | 2.75 | 46.91 | 3.33 |
7202 | 7508 | 2.249139 | GAGGGAGTAGGTCACACTTGT | 58.751 | 52.381 | 0.00 | 0.00 | 0.00 | 3.16 |
7203 | 7509 | 1.550976 | GGAGGGAGTAGGTCACACTTG | 59.449 | 57.143 | 0.00 | 0.00 | 0.00 | 3.16 |
7204 | 7510 | 1.891450 | CGGAGGGAGTAGGTCACACTT | 60.891 | 57.143 | 0.00 | 0.00 | 0.00 | 3.16 |
7205 | 7511 | 0.323542 | CGGAGGGAGTAGGTCACACT | 60.324 | 60.000 | 0.00 | 0.00 | 0.00 | 3.55 |
7206 | 7512 | 0.611340 | ACGGAGGGAGTAGGTCACAC | 60.611 | 60.000 | 0.00 | 0.00 | 0.00 | 3.82 |
7207 | 7513 | 0.113776 | AACGGAGGGAGTAGGTCACA | 59.886 | 55.000 | 0.00 | 0.00 | 0.00 | 3.58 |
7208 | 7514 | 0.816373 | GAACGGAGGGAGTAGGTCAC | 59.184 | 60.000 | 0.00 | 0.00 | 0.00 | 3.67 |
7209 | 7515 | 0.324091 | GGAACGGAGGGAGTAGGTCA | 60.324 | 60.000 | 0.00 | 0.00 | 0.00 | 4.02 |
7210 | 7516 | 0.033306 | AGGAACGGAGGGAGTAGGTC | 60.033 | 60.000 | 0.00 | 0.00 | 0.00 | 3.85 |
7212 | 7518 | 2.449137 | TTAGGAACGGAGGGAGTAGG | 57.551 | 55.000 | 0.00 | 0.00 | 0.00 | 3.18 |
7213 | 7519 | 5.139001 | AGTATTTAGGAACGGAGGGAGTAG | 58.861 | 45.833 | 0.00 | 0.00 | 0.00 | 2.57 |
7214 | 7520 | 5.134725 | AGTATTTAGGAACGGAGGGAGTA | 57.865 | 43.478 | 0.00 | 0.00 | 0.00 | 2.59 |
7215 | 7521 | 3.991683 | AGTATTTAGGAACGGAGGGAGT | 58.008 | 45.455 | 0.00 | 0.00 | 0.00 | 3.85 |
7216 | 7522 | 4.161754 | ACAAGTATTTAGGAACGGAGGGAG | 59.838 | 45.833 | 0.00 | 0.00 | 0.00 | 4.30 |
7217 | 7523 | 4.098894 | ACAAGTATTTAGGAACGGAGGGA | 58.901 | 43.478 | 0.00 | 0.00 | 0.00 | 4.20 |
7218 | 7524 | 4.161754 | AGACAAGTATTTAGGAACGGAGGG | 59.838 | 45.833 | 0.00 | 0.00 | 0.00 | 4.30 |
7219 | 7525 | 5.340439 | AGACAAGTATTTAGGAACGGAGG | 57.660 | 43.478 | 0.00 | 0.00 | 0.00 | 4.30 |
7220 | 7526 | 7.097834 | AGAAAGACAAGTATTTAGGAACGGAG | 58.902 | 38.462 | 0.00 | 0.00 | 0.00 | 4.63 |
7221 | 7527 | 7.001099 | AGAAAGACAAGTATTTAGGAACGGA | 57.999 | 36.000 | 0.00 | 0.00 | 0.00 | 4.69 |
7222 | 7528 | 7.491696 | CCTAGAAAGACAAGTATTTAGGAACGG | 59.508 | 40.741 | 4.01 | 0.00 | 26.70 | 4.44 |
7223 | 7529 | 7.010275 | GCCTAGAAAGACAAGTATTTAGGAACG | 59.990 | 40.741 | 11.40 | 0.00 | 26.70 | 3.95 |
7224 | 7530 | 7.822822 | TGCCTAGAAAGACAAGTATTTAGGAAC | 59.177 | 37.037 | 11.40 | 0.00 | 26.70 | 3.62 |
7225 | 7531 | 7.913789 | TGCCTAGAAAGACAAGTATTTAGGAA | 58.086 | 34.615 | 11.40 | 1.02 | 26.70 | 3.36 |
7226 | 7532 | 7.490657 | TGCCTAGAAAGACAAGTATTTAGGA | 57.509 | 36.000 | 11.40 | 0.00 | 26.70 | 2.94 |
7227 | 7533 | 8.738645 | AATGCCTAGAAAGACAAGTATTTAGG | 57.261 | 34.615 | 5.26 | 5.26 | 0.00 | 2.69 |
7229 | 7535 | 9.733556 | TGAAATGCCTAGAAAGACAAGTATTTA | 57.266 | 29.630 | 0.00 | 0.00 | 0.00 | 1.40 |
7230 | 7536 | 8.635765 | TGAAATGCCTAGAAAGACAAGTATTT | 57.364 | 30.769 | 0.00 | 0.00 | 0.00 | 1.40 |
7231 | 7537 | 8.515414 | GTTGAAATGCCTAGAAAGACAAGTATT | 58.485 | 33.333 | 0.00 | 0.00 | 0.00 | 1.89 |
7232 | 7538 | 7.665559 | TGTTGAAATGCCTAGAAAGACAAGTAT | 59.334 | 33.333 | 0.00 | 0.00 | 0.00 | 2.12 |
7233 | 7539 | 6.995686 | TGTTGAAATGCCTAGAAAGACAAGTA | 59.004 | 34.615 | 0.00 | 0.00 | 0.00 | 2.24 |
7234 | 7540 | 5.827797 | TGTTGAAATGCCTAGAAAGACAAGT | 59.172 | 36.000 | 0.00 | 0.00 | 0.00 | 3.16 |
7235 | 7541 | 6.317789 | TGTTGAAATGCCTAGAAAGACAAG | 57.682 | 37.500 | 0.00 | 0.00 | 0.00 | 3.16 |
7236 | 7542 | 6.321181 | ACTTGTTGAAATGCCTAGAAAGACAA | 59.679 | 34.615 | 0.00 | 0.00 | 0.00 | 3.18 |
7237 | 7543 | 5.827797 | ACTTGTTGAAATGCCTAGAAAGACA | 59.172 | 36.000 | 0.00 | 0.00 | 0.00 | 3.41 |
7238 | 7544 | 6.017109 | TCACTTGTTGAAATGCCTAGAAAGAC | 60.017 | 38.462 | 0.00 | 0.00 | 0.00 | 3.01 |
7239 | 7545 | 6.017109 | GTCACTTGTTGAAATGCCTAGAAAGA | 60.017 | 38.462 | 0.00 | 0.00 | 35.39 | 2.52 |
7240 | 7546 | 6.016777 | AGTCACTTGTTGAAATGCCTAGAAAG | 60.017 | 38.462 | 0.00 | 0.00 | 35.39 | 2.62 |
7241 | 7547 | 5.827797 | AGTCACTTGTTGAAATGCCTAGAAA | 59.172 | 36.000 | 0.00 | 0.00 | 35.39 | 2.52 |
7242 | 7548 | 5.376625 | AGTCACTTGTTGAAATGCCTAGAA | 58.623 | 37.500 | 0.00 | 0.00 | 35.39 | 2.10 |
7243 | 7549 | 4.973168 | AGTCACTTGTTGAAATGCCTAGA | 58.027 | 39.130 | 0.00 | 0.00 | 35.39 | 2.43 |
7244 | 7550 | 5.700832 | TGTAGTCACTTGTTGAAATGCCTAG | 59.299 | 40.000 | 0.00 | 0.00 | 35.39 | 3.02 |
7245 | 7551 | 5.616270 | TGTAGTCACTTGTTGAAATGCCTA | 58.384 | 37.500 | 0.00 | 0.00 | 35.39 | 3.93 |
7246 | 7552 | 4.460263 | TGTAGTCACTTGTTGAAATGCCT | 58.540 | 39.130 | 0.00 | 0.00 | 35.39 | 4.75 |
7247 | 7553 | 4.829064 | TGTAGTCACTTGTTGAAATGCC | 57.171 | 40.909 | 0.00 | 0.00 | 35.39 | 4.40 |
7248 | 7554 | 6.015504 | CGTATGTAGTCACTTGTTGAAATGC | 58.984 | 40.000 | 0.00 | 0.00 | 35.39 | 3.56 |
7249 | 7555 | 6.367695 | TCCGTATGTAGTCACTTGTTGAAATG | 59.632 | 38.462 | 0.00 | 0.00 | 35.39 | 2.32 |
7250 | 7556 | 6.460781 | TCCGTATGTAGTCACTTGTTGAAAT | 58.539 | 36.000 | 0.00 | 0.00 | 35.39 | 2.17 |
7251 | 7557 | 5.845103 | TCCGTATGTAGTCACTTGTTGAAA | 58.155 | 37.500 | 0.00 | 0.00 | 35.39 | 2.69 |
7252 | 7558 | 5.456548 | TCCGTATGTAGTCACTTGTTGAA | 57.543 | 39.130 | 0.00 | 0.00 | 35.39 | 2.69 |
7253 | 7559 | 4.617530 | GCTCCGTATGTAGTCACTTGTTGA | 60.618 | 45.833 | 0.00 | 0.00 | 0.00 | 3.18 |
7254 | 7560 | 3.612860 | GCTCCGTATGTAGTCACTTGTTG | 59.387 | 47.826 | 0.00 | 0.00 | 0.00 | 3.33 |
7255 | 7561 | 3.257375 | TGCTCCGTATGTAGTCACTTGTT | 59.743 | 43.478 | 0.00 | 0.00 | 0.00 | 2.83 |
7256 | 7562 | 2.823747 | TGCTCCGTATGTAGTCACTTGT | 59.176 | 45.455 | 0.00 | 0.00 | 0.00 | 3.16 |
7257 | 7563 | 3.503827 | TGCTCCGTATGTAGTCACTTG | 57.496 | 47.619 | 0.00 | 0.00 | 0.00 | 3.16 |
7258 | 7564 | 4.530710 | TTTGCTCCGTATGTAGTCACTT | 57.469 | 40.909 | 0.00 | 0.00 | 0.00 | 3.16 |
7259 | 7565 | 4.530710 | TTTTGCTCCGTATGTAGTCACT | 57.469 | 40.909 | 0.00 | 0.00 | 0.00 | 3.41 |
7260 | 7566 | 4.868171 | TCATTTTGCTCCGTATGTAGTCAC | 59.132 | 41.667 | 0.00 | 0.00 | 0.00 | 3.67 |
7261 | 7567 | 5.079689 | TCATTTTGCTCCGTATGTAGTCA | 57.920 | 39.130 | 0.00 | 0.00 | 0.00 | 3.41 |
7262 | 7568 | 5.005779 | CACTCATTTTGCTCCGTATGTAGTC | 59.994 | 44.000 | 0.00 | 0.00 | 0.00 | 2.59 |
7263 | 7569 | 4.870426 | CACTCATTTTGCTCCGTATGTAGT | 59.130 | 41.667 | 0.00 | 0.00 | 0.00 | 2.73 |
7264 | 7570 | 5.109210 | TCACTCATTTTGCTCCGTATGTAG | 58.891 | 41.667 | 0.00 | 0.00 | 0.00 | 2.74 |
7265 | 7571 | 5.079689 | TCACTCATTTTGCTCCGTATGTA | 57.920 | 39.130 | 0.00 | 0.00 | 0.00 | 2.29 |
7266 | 7572 | 3.937814 | TCACTCATTTTGCTCCGTATGT | 58.062 | 40.909 | 0.00 | 0.00 | 0.00 | 2.29 |
7267 | 7573 | 4.944962 | TTCACTCATTTTGCTCCGTATG | 57.055 | 40.909 | 0.00 | 0.00 | 0.00 | 2.39 |
7268 | 7574 | 5.431765 | AGATTCACTCATTTTGCTCCGTAT | 58.568 | 37.500 | 0.00 | 0.00 | 0.00 | 3.06 |
7269 | 7575 | 4.832248 | AGATTCACTCATTTTGCTCCGTA | 58.168 | 39.130 | 0.00 | 0.00 | 0.00 | 4.02 |
7270 | 7576 | 3.679389 | AGATTCACTCATTTTGCTCCGT | 58.321 | 40.909 | 0.00 | 0.00 | 0.00 | 4.69 |
7271 | 7577 | 4.631377 | TGTAGATTCACTCATTTTGCTCCG | 59.369 | 41.667 | 0.00 | 0.00 | 0.00 | 4.63 |
7272 | 7578 | 5.645497 | AGTGTAGATTCACTCATTTTGCTCC | 59.355 | 40.000 | 0.00 | 0.00 | 44.07 | 4.70 |
7273 | 7579 | 6.541086 | CAGTGTAGATTCACTCATTTTGCTC | 58.459 | 40.000 | 0.00 | 0.00 | 45.37 | 4.26 |
7274 | 7580 | 5.106396 | GCAGTGTAGATTCACTCATTTTGCT | 60.106 | 40.000 | 0.00 | 0.00 | 45.37 | 3.91 |
7275 | 7581 | 5.091431 | GCAGTGTAGATTCACTCATTTTGC | 58.909 | 41.667 | 0.00 | 0.00 | 45.37 | 3.68 |
7276 | 7582 | 6.245115 | TGCAGTGTAGATTCACTCATTTTG | 57.755 | 37.500 | 0.00 | 0.00 | 45.37 | 2.44 |
7277 | 7583 | 6.094603 | GGATGCAGTGTAGATTCACTCATTTT | 59.905 | 38.462 | 0.00 | 0.00 | 45.37 | 1.82 |
7278 | 7584 | 5.587844 | GGATGCAGTGTAGATTCACTCATTT | 59.412 | 40.000 | 0.00 | 0.00 | 45.37 | 2.32 |
7279 | 7585 | 5.121811 | GGATGCAGTGTAGATTCACTCATT | 58.878 | 41.667 | 0.00 | 0.00 | 45.37 | 2.57 |
7280 | 7586 | 4.701765 | GGATGCAGTGTAGATTCACTCAT | 58.298 | 43.478 | 0.00 | 0.00 | 45.37 | 2.90 |
7281 | 7587 | 3.429410 | CGGATGCAGTGTAGATTCACTCA | 60.429 | 47.826 | 0.00 | 0.00 | 45.37 | 3.41 |
7282 | 7588 | 3.119291 | CGGATGCAGTGTAGATTCACTC | 58.881 | 50.000 | 0.00 | 0.00 | 45.37 | 3.51 |
7283 | 7589 | 8.081105 | ACATACGGATGCAGTGTAGATTCACT | 62.081 | 42.308 | 7.78 | 0.00 | 41.31 | 3.41 |
7284 | 7590 | 2.893637 | ACGGATGCAGTGTAGATTCAC | 58.106 | 47.619 | 0.00 | 0.00 | 38.46 | 3.18 |
7285 | 7591 | 4.099419 | ACATACGGATGCAGTGTAGATTCA | 59.901 | 41.667 | 7.78 | 0.00 | 36.43 | 2.57 |
7286 | 7592 | 4.621991 | ACATACGGATGCAGTGTAGATTC | 58.378 | 43.478 | 7.78 | 0.00 | 36.43 | 2.52 |
7287 | 7593 | 4.672587 | ACATACGGATGCAGTGTAGATT | 57.327 | 40.909 | 7.78 | 0.00 | 36.43 | 2.40 |
7288 | 7594 | 4.827835 | ACTACATACGGATGCAGTGTAGAT | 59.172 | 41.667 | 12.92 | 0.00 | 42.90 | 1.98 |
7289 | 7595 | 4.204799 | ACTACATACGGATGCAGTGTAGA | 58.795 | 43.478 | 12.92 | 3.57 | 42.90 | 2.59 |
7290 | 7596 | 4.569761 | ACTACATACGGATGCAGTGTAG | 57.430 | 45.455 | 12.92 | 8.16 | 44.72 | 2.74 |
7291 | 7597 | 5.128205 | ACTACTACATACGGATGCAGTGTA | 58.872 | 41.667 | 21.72 | 11.68 | 39.56 | 2.90 |
7292 | 7598 | 3.952323 | ACTACTACATACGGATGCAGTGT | 59.048 | 43.478 | 21.72 | 14.69 | 39.56 | 3.55 |
7293 | 7599 | 4.036380 | TGACTACTACATACGGATGCAGTG | 59.964 | 45.833 | 21.72 | 14.14 | 39.56 | 3.66 |
7294 | 7600 | 4.204799 | TGACTACTACATACGGATGCAGT | 58.795 | 43.478 | 17.59 | 17.59 | 41.64 | 4.40 |
7295 | 7601 | 4.830826 | TGACTACTACATACGGATGCAG | 57.169 | 45.455 | 7.78 | 6.97 | 36.43 | 4.41 |
7296 | 7602 | 5.784578 | AATGACTACTACATACGGATGCA | 57.215 | 39.130 | 7.78 | 0.00 | 36.43 | 3.96 |
7297 | 7603 | 6.213677 | TCAAATGACTACTACATACGGATGC | 58.786 | 40.000 | 7.78 | 0.00 | 36.43 | 3.91 |
7298 | 7604 | 8.642908 | TTTCAAATGACTACTACATACGGATG | 57.357 | 34.615 | 5.94 | 5.94 | 39.16 | 3.51 |
7299 | 7605 | 9.261180 | CATTTCAAATGACTACTACATACGGAT | 57.739 | 33.333 | 3.82 | 0.00 | 0.00 | 4.18 |
7300 | 7606 | 8.255206 | ACATTTCAAATGACTACTACATACGGA | 58.745 | 33.333 | 17.30 | 0.00 | 0.00 | 4.69 |
7301 | 7607 | 8.420374 | ACATTTCAAATGACTACTACATACGG | 57.580 | 34.615 | 17.30 | 0.00 | 0.00 | 4.02 |
7302 | 7608 | 9.302345 | AGACATTTCAAATGACTACTACATACG | 57.698 | 33.333 | 17.30 | 0.00 | 0.00 | 3.06 |
7326 | 7632 | 8.248945 | CCGTTCCTAAATACTTGTCTTTCTAGA | 58.751 | 37.037 | 0.00 | 0.00 | 0.00 | 2.43 |
7327 | 7633 | 8.248945 | TCCGTTCCTAAATACTTGTCTTTCTAG | 58.751 | 37.037 | 0.00 | 0.00 | 0.00 | 2.43 |
7328 | 7634 | 8.125978 | TCCGTTCCTAAATACTTGTCTTTCTA | 57.874 | 34.615 | 0.00 | 0.00 | 0.00 | 2.10 |
7329 | 7635 | 7.001099 | TCCGTTCCTAAATACTTGTCTTTCT | 57.999 | 36.000 | 0.00 | 0.00 | 0.00 | 2.52 |
7330 | 7636 | 6.313164 | CCTCCGTTCCTAAATACTTGTCTTTC | 59.687 | 42.308 | 0.00 | 0.00 | 0.00 | 2.62 |
7331 | 7637 | 6.171213 | CCTCCGTTCCTAAATACTTGTCTTT | 58.829 | 40.000 | 0.00 | 0.00 | 0.00 | 2.52 |
7332 | 7638 | 5.338137 | CCCTCCGTTCCTAAATACTTGTCTT | 60.338 | 44.000 | 0.00 | 0.00 | 0.00 | 3.01 |
7333 | 7639 | 4.161754 | CCCTCCGTTCCTAAATACTTGTCT | 59.838 | 45.833 | 0.00 | 0.00 | 0.00 | 3.41 |
7334 | 7640 | 4.161001 | TCCCTCCGTTCCTAAATACTTGTC | 59.839 | 45.833 | 0.00 | 0.00 | 0.00 | 3.18 |
7335 | 7641 | 4.098894 | TCCCTCCGTTCCTAAATACTTGT | 58.901 | 43.478 | 0.00 | 0.00 | 0.00 | 3.16 |
7336 | 7642 | 4.161754 | ACTCCCTCCGTTCCTAAATACTTG | 59.838 | 45.833 | 0.00 | 0.00 | 0.00 | 3.16 |
7337 | 7643 | 4.359996 | ACTCCCTCCGTTCCTAAATACTT | 58.640 | 43.478 | 0.00 | 0.00 | 0.00 | 2.24 |
7338 | 7644 | 3.991683 | ACTCCCTCCGTTCCTAAATACT | 58.008 | 45.455 | 0.00 | 0.00 | 0.00 | 2.12 |
7339 | 7645 | 4.646492 | TGTACTCCCTCCGTTCCTAAATAC | 59.354 | 45.833 | 0.00 | 0.00 | 0.00 | 1.89 |
7340 | 7646 | 4.870636 | TGTACTCCCTCCGTTCCTAAATA | 58.129 | 43.478 | 0.00 | 0.00 | 0.00 | 1.40 |
7341 | 7647 | 3.716431 | TGTACTCCCTCCGTTCCTAAAT | 58.284 | 45.455 | 0.00 | 0.00 | 0.00 | 1.40 |
7342 | 7648 | 3.173953 | TGTACTCCCTCCGTTCCTAAA | 57.826 | 47.619 | 0.00 | 0.00 | 0.00 | 1.85 |
7343 | 7649 | 2.905415 | TGTACTCCCTCCGTTCCTAA | 57.095 | 50.000 | 0.00 | 0.00 | 0.00 | 2.69 |
7344 | 7650 | 2.042162 | ACTTGTACTCCCTCCGTTCCTA | 59.958 | 50.000 | 0.00 | 0.00 | 0.00 | 2.94 |
7345 | 7651 | 1.203149 | ACTTGTACTCCCTCCGTTCCT | 60.203 | 52.381 | 0.00 | 0.00 | 0.00 | 3.36 |
7346 | 7652 | 1.204231 | GACTTGTACTCCCTCCGTTCC | 59.796 | 57.143 | 0.00 | 0.00 | 0.00 | 3.62 |
7347 | 7653 | 2.169330 | AGACTTGTACTCCCTCCGTTC | 58.831 | 52.381 | 0.00 | 0.00 | 0.00 | 3.95 |
7348 | 7654 | 2.305858 | AGACTTGTACTCCCTCCGTT | 57.694 | 50.000 | 0.00 | 0.00 | 0.00 | 4.44 |
7349 | 7655 | 2.944991 | GCTAGACTTGTACTCCCTCCGT | 60.945 | 54.545 | 0.00 | 0.00 | 0.00 | 4.69 |
7350 | 7656 | 1.677052 | GCTAGACTTGTACTCCCTCCG | 59.323 | 57.143 | 0.00 | 0.00 | 0.00 | 4.63 |
7351 | 7657 | 2.033372 | GGCTAGACTTGTACTCCCTCC | 58.967 | 57.143 | 0.00 | 0.00 | 0.00 | 4.30 |
7352 | 7658 | 3.021177 | AGGCTAGACTTGTACTCCCTC | 57.979 | 52.381 | 0.00 | 0.00 | 0.00 | 4.30 |
7353 | 7659 | 3.100671 | CAAGGCTAGACTTGTACTCCCT | 58.899 | 50.000 | 27.51 | 1.29 | 42.18 | 4.20 |
7354 | 7660 | 3.528597 | CAAGGCTAGACTTGTACTCCC | 57.471 | 52.381 | 27.51 | 0.00 | 42.18 | 4.30 |
7362 | 7668 | 6.214819 | TCCCAGTAAAATACAAGGCTAGACTT | 59.785 | 38.462 | 4.51 | 4.51 | 0.00 | 3.01 |
7409 | 7715 | 4.160439 | TCGACATAGCTCAAGACCTTTCAT | 59.840 | 41.667 | 0.00 | 0.00 | 0.00 | 2.57 |
7420 | 7726 | 2.627699 | TGTGCCATATCGACATAGCTCA | 59.372 | 45.455 | 0.00 | 0.00 | 0.00 | 4.26 |
7426 | 7734 | 0.179086 | TGCGTGTGCCATATCGACAT | 60.179 | 50.000 | 0.00 | 0.00 | 41.78 | 3.06 |
7443 | 7751 | 3.873361 | TGCAGAGCTTATGTAGTTCATGC | 59.127 | 43.478 | 0.00 | 0.00 | 38.01 | 4.06 |
7495 | 7804 | 6.437928 | TGCATGTGAATAACAGTCTTGTTTC | 58.562 | 36.000 | 0.00 | 0.00 | 45.01 | 2.78 |
7500 | 7809 | 4.074259 | TGCTGCATGTGAATAACAGTCTT | 58.926 | 39.130 | 0.00 | 0.00 | 43.64 | 3.01 |
7510 | 7819 | 2.628696 | CCGCCTTGCTGCATGTGAA | 61.629 | 57.895 | 1.84 | 0.00 | 0.00 | 3.18 |
7512 | 7821 | 3.367743 | ACCGCCTTGCTGCATGTG | 61.368 | 61.111 | 1.84 | 4.70 | 0.00 | 3.21 |
7529 | 7838 | 1.881973 | GTTCAGCTGTTTGATGCTCCA | 59.118 | 47.619 | 14.67 | 0.00 | 37.44 | 3.86 |
7589 | 7898 | 2.997315 | CGGTGACCTCTCCAGGCA | 60.997 | 66.667 | 0.00 | 0.00 | 45.05 | 4.75 |
7593 | 7902 | 2.037367 | CCTCCGGTGACCTCTCCA | 59.963 | 66.667 | 4.76 | 0.00 | 0.00 | 3.86 |
7692 | 8001 | 2.097825 | GCATTCTGGGAGAGCAACAAT | 58.902 | 47.619 | 0.00 | 0.00 | 0.00 | 2.71 |
7755 | 8064 | 5.126067 | CCGACCAGGATACATCTTTCATTT | 58.874 | 41.667 | 0.00 | 0.00 | 45.00 | 2.32 |
7797 | 8111 | 9.905713 | ACTAAGTGGTTGTATCATATGTTCAAT | 57.094 | 29.630 | 1.90 | 0.00 | 0.00 | 2.57 |
7799 | 8113 | 9.378551 | GAACTAAGTGGTTGTATCATATGTTCA | 57.621 | 33.333 | 1.90 | 0.00 | 0.00 | 3.18 |
7886 | 8200 | 3.137176 | TGGGGAATAAAGCATCTCCAGAG | 59.863 | 47.826 | 0.00 | 0.00 | 41.30 | 3.35 |
8014 | 8328 | 2.158254 | GCTTATGGTTTTGCTGCTTTGC | 59.842 | 45.455 | 0.00 | 0.00 | 0.00 | 3.68 |
8027 | 8341 | 2.401583 | TCGACATGCTTGCTTATGGT | 57.598 | 45.000 | 0.00 | 0.00 | 0.00 | 3.55 |
8032 | 8346 | 3.338249 | AGTAACATCGACATGCTTGCTT | 58.662 | 40.909 | 0.00 | 0.00 | 32.57 | 3.91 |
8033 | 8347 | 2.932614 | GAGTAACATCGACATGCTTGCT | 59.067 | 45.455 | 0.00 | 0.00 | 32.57 | 3.91 |
8056 | 8370 | 7.894708 | TGCCAAGTCATTTAAATCAGAAATGA | 58.105 | 30.769 | 6.69 | 6.69 | 46.16 | 2.57 |
8057 | 8371 | 8.537049 | TTGCCAAGTCATTTAAATCAGAAATG | 57.463 | 30.769 | 0.00 | 2.39 | 42.94 | 2.32 |
8060 | 8374 | 9.638239 | GTTATTGCCAAGTCATTTAAATCAGAA | 57.362 | 29.630 | 0.00 | 0.00 | 0.00 | 3.02 |
8061 | 8375 | 8.801299 | TGTTATTGCCAAGTCATTTAAATCAGA | 58.199 | 29.630 | 0.00 | 0.00 | 0.00 | 3.27 |
8062 | 8376 | 8.984891 | TGTTATTGCCAAGTCATTTAAATCAG | 57.015 | 30.769 | 0.00 | 0.00 | 0.00 | 2.90 |
8063 | 8377 | 9.770097 | TTTGTTATTGCCAAGTCATTTAAATCA | 57.230 | 25.926 | 0.00 | 0.00 | 0.00 | 2.57 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.