Multiple sequence alignment - TraesCS3B01G495200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G495200 chr3B 100.000 3797 0 0 1 3797 739326441 739330237 0.000000e+00 7012
1 TraesCS3B01G495200 chr3B 75.994 704 137 27 2064 2742 739542007 739541311 6.080000e-88 335
2 TraesCS3B01G495200 chr3B 79.775 267 52 2 2495 2760 739650303 739650038 3.870000e-45 193
3 TraesCS3B01G495200 chr3B 78.322 286 57 4 2060 2341 739710637 739710353 3.010000e-41 180
4 TraesCS3B01G495200 chr3D 91.966 2925 209 11 1 2912 556853969 556856880 0.000000e+00 4076
5 TraesCS3B01G495200 chr3D 81.688 1884 286 27 948 2779 556626027 556627903 0.000000e+00 1513
6 TraesCS3B01G495200 chr3D 91.290 310 22 5 3486 3791 556856977 556857285 5.870000e-113 418
7 TraesCS3B01G495200 chr3D 76.848 717 135 22 2064 2760 556958331 556957626 3.580000e-100 375
8 TraesCS3B01G495200 chr3D 83.465 254 42 0 2088 2341 556033611 556033358 1.760000e-58 237
9 TraesCS3B01G495200 chr3D 77.157 394 60 19 942 1315 556635061 556635444 6.430000e-48 202
10 TraesCS3B01G495200 chr3D 73.882 425 62 26 248 664 556611282 556610899 1.430000e-24 124
11 TraesCS3B01G495200 chr3A 73.167 723 161 22 2079 2777 692971336 692970623 2.950000e-56 230
12 TraesCS3B01G495200 chr6A 80.339 295 44 14 2925 3208 584952063 584952354 1.070000e-50 211
13 TraesCS3B01G495200 chr7B 80.556 288 43 13 2925 3202 594019631 594019347 3.840000e-50 209
14 TraesCS3B01G495200 chr7B 80.435 276 41 13 2925 3190 478909831 478909559 8.320000e-47 198
15 TraesCS3B01G495200 chr7B 79.038 291 46 15 2925 3204 116523054 116522768 6.480000e-43 185
16 TraesCS3B01G495200 chr2A 81.159 276 39 13 2925 3190 203721327 203721055 3.840000e-50 209
17 TraesCS3B01G495200 chr2A 80.797 276 40 13 2925 3190 15461147 15461419 1.790000e-48 204
18 TraesCS3B01G495200 chr2B 79.461 297 45 15 2925 3208 390608224 390608517 2.990000e-46 196
19 TraesCS3B01G495200 chr7A 80.216 278 37 18 2925 3190 348087461 348087190 3.870000e-45 193
20 TraesCS3B01G495200 chr5B 79.720 286 41 17 2930 3203 478699100 478698820 1.390000e-44 191


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G495200 chr3B 739326441 739330237 3796 False 7012 7012 100.000 1 3797 1 chr3B.!!$F1 3796
1 TraesCS3B01G495200 chr3B 739541311 739542007 696 True 335 335 75.994 2064 2742 1 chr3B.!!$R1 678
2 TraesCS3B01G495200 chr3D 556853969 556857285 3316 False 2247 4076 91.628 1 3791 2 chr3D.!!$F3 3790
3 TraesCS3B01G495200 chr3D 556626027 556627903 1876 False 1513 1513 81.688 948 2779 1 chr3D.!!$F1 1831
4 TraesCS3B01G495200 chr3D 556957626 556958331 705 True 375 375 76.848 2064 2760 1 chr3D.!!$R3 696
5 TraesCS3B01G495200 chr3A 692970623 692971336 713 True 230 230 73.167 2079 2777 1 chr3A.!!$R1 698

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
820 825 0.386113 GGAGATGCCGTGTAGAGGAC 59.614 60.0 0.00 0.0 0.0 3.85 F
1229 1242 0.035458 CTGGAGGCCACGTTCTTCTT 59.965 55.0 5.01 0.0 0.0 2.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1778 1812 0.042131 TGGTGGGGGAGAAGTATCGT 59.958 55.0 0.0 0.0 0.0 3.73 R
3071 3174 0.032615 TGCTTGGGGAAAAGTGTGGT 60.033 50.0 0.0 0.0 0.0 4.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
130 131 0.396435 AACTGGAGCCAACATCGTCA 59.604 50.000 0.00 0.00 0.00 4.35
136 137 0.740868 AGCCAACATCGTCACCATCG 60.741 55.000 0.00 0.00 0.00 3.84
142 143 1.062047 ATCGTCACCATCGTCGTCG 59.938 57.895 0.00 0.00 38.55 5.12
149 150 1.226323 CCATCGTCGTCGTCTGTCC 60.226 63.158 1.33 0.00 38.33 4.02
152 153 1.239296 ATCGTCGTCGTCTGTCCCAA 61.239 55.000 1.33 0.00 38.33 4.12
175 176 1.301087 TGAATGGTCGTCGGCGTTT 60.301 52.632 10.18 0.00 39.49 3.60
211 212 1.500396 GCCAACGGCTTTAACCTCG 59.500 57.895 0.00 0.00 46.69 4.63
215 216 2.350498 CCAACGGCTTTAACCTCGTATG 59.650 50.000 0.00 0.00 35.26 2.39
316 317 1.742411 GCATGCTTCAGGGCGTAAGTA 60.742 52.381 11.37 0.00 41.68 2.24
348 349 1.964373 CCGTGGTCTTTTGGTCGGG 60.964 63.158 0.00 0.00 35.25 5.14
351 352 1.880646 CGTGGTCTTTTGGTCGGGATT 60.881 52.381 0.00 0.00 0.00 3.01
352 353 1.539827 GTGGTCTTTTGGTCGGGATTG 59.460 52.381 0.00 0.00 0.00 2.67
467 468 1.078759 GGTGACGATTGAGGACAGCG 61.079 60.000 0.00 0.00 33.93 5.18
502 503 5.692204 GTGATTGATGTACTCGGTGGAATAG 59.308 44.000 0.00 0.00 0.00 1.73
505 506 5.707242 TGATGTACTCGGTGGAATAGATC 57.293 43.478 0.00 0.00 28.54 2.75
506 507 5.137551 TGATGTACTCGGTGGAATAGATCA 58.862 41.667 0.00 0.00 33.80 2.92
511 512 4.023980 ACTCGGTGGAATAGATCAAGTCA 58.976 43.478 0.00 0.00 0.00 3.41
517 518 4.677378 GTGGAATAGATCAAGTCATCGTCG 59.323 45.833 0.00 0.00 0.00 5.12
521 522 2.092323 AGATCAAGTCATCGTCGACCA 58.908 47.619 10.58 0.00 36.52 4.02
589 590 2.436646 GTGTGGACGATGGCCAGG 60.437 66.667 13.05 8.50 35.77 4.45
678 679 3.121030 GCCAAGCACGACATCGCT 61.121 61.111 0.14 0.00 44.43 4.93
688 689 1.138636 CGACATCGCTGAGACTGCTG 61.139 60.000 0.00 0.00 0.00 4.41
736 737 0.458543 CCAGTTCGACGATCTGGTGG 60.459 60.000 32.91 18.02 41.83 4.61
746 747 1.561643 GATCTGGTGGGAGTGACTCA 58.438 55.000 15.33 0.00 31.08 3.41
749 750 1.077828 TCTGGTGGGAGTGACTCATCT 59.922 52.381 15.33 0.00 30.11 2.90
750 751 1.480137 CTGGTGGGAGTGACTCATCTC 59.520 57.143 15.33 6.79 30.11 2.75
820 825 0.386113 GGAGATGCCGTGTAGAGGAC 59.614 60.000 0.00 0.00 0.00 3.85
833 838 4.512571 GTGTAGAGGACTAGAGATCGGTTC 59.487 50.000 0.00 0.00 0.00 3.62
839 844 5.697067 AGGACTAGAGATCGGTTCATAACT 58.303 41.667 0.00 0.00 0.00 2.24
861 866 1.205820 GTTTACGTCGTTGCCTGCC 59.794 57.895 1.78 0.00 0.00 4.85
876 881 1.399089 CCTGCCCAAATACGTAAACGG 59.601 52.381 7.50 0.00 44.95 4.44
1068 1078 3.470888 ATCCTCCACTTCGCCCCG 61.471 66.667 0.00 0.00 0.00 5.73
1175 1185 0.523546 CACGTCGAGCGCATAGAACT 60.524 55.000 11.47 0.00 46.11 3.01
1179 1189 2.641912 GTCGAGCGCATAGAACTACTC 58.358 52.381 11.47 0.00 0.00 2.59
1229 1242 0.035458 CTGGAGGCCACGTTCTTCTT 59.965 55.000 5.01 0.00 0.00 2.52
1364 1386 2.631428 CAACAGCGACGGGTTGTG 59.369 61.111 0.00 0.00 39.36 3.33
1365 1387 3.276846 AACAGCGACGGGTTGTGC 61.277 61.111 0.00 0.00 39.36 4.57
1366 1388 3.750373 AACAGCGACGGGTTGTGCT 62.750 57.895 0.00 0.00 39.36 4.40
1482 1513 1.022735 ACGACACCTACTATGAGCCG 58.977 55.000 0.00 0.00 0.00 5.52
1531 1562 0.249238 CGAGTACATGCTCAGCCTCC 60.249 60.000 0.00 0.00 35.33 4.30
1595 1626 0.111061 TGCAACAGCATCCTTCCACT 59.889 50.000 0.00 0.00 32.31 4.00
1600 1631 2.233566 AGCATCCTTCCACTGGCCA 61.234 57.895 4.71 4.71 0.00 5.36
1664 1695 4.794439 CACCGTGCGCCTCGATGA 62.794 66.667 20.45 0.00 0.00 2.92
1678 1709 1.039785 CGATGACCTCCAGAGCCTCA 61.040 60.000 0.00 0.00 0.00 3.86
1681 1712 0.689080 TGACCTCCAGAGCCTCATCC 60.689 60.000 0.00 0.00 0.00 3.51
1720 1751 0.692476 CACCATCCACCTTGAGTCCA 59.308 55.000 0.00 0.00 0.00 4.02
1734 1768 2.101415 TGAGTCCATCGTCATCACCATC 59.899 50.000 0.00 0.00 0.00 3.51
1744 1778 0.964860 CATCACCATCGGGCCAACAA 60.965 55.000 4.39 0.00 37.90 2.83
1759 1793 4.409588 CAAACGACACGAGCGCGG 62.410 66.667 15.86 5.77 43.17 6.46
1807 1844 2.824880 CCCCCACCACCGACAGAAA 61.825 63.158 0.00 0.00 0.00 2.52
1822 1859 4.393062 CGACAGAAATAGTGCTCCAATGTT 59.607 41.667 0.00 0.00 0.00 2.71
1832 1869 3.140141 CCAATGTTCGGCGGCCAT 61.140 61.111 20.71 6.73 0.00 4.40
1873 1910 1.542987 GCAGCTGGAGAGGGAATGATC 60.543 57.143 17.12 0.00 0.00 2.92
1886 1926 2.311688 AATGATCACGAGACCCCCGC 62.312 60.000 0.00 0.00 0.00 6.13
1937 1977 3.186047 GCGGCGCTTCGTGTACAT 61.186 61.111 26.86 0.00 0.00 2.29
1970 2010 2.434185 GTTCACGATGAGCCCGCA 60.434 61.111 0.00 0.00 0.00 5.69
1976 2016 4.783621 GATGAGCCCGCAGCCACA 62.784 66.667 0.00 0.00 45.47 4.17
2031 2071 2.423538 GCCATGCGACAAGAAAAGGTAT 59.576 45.455 0.00 0.00 0.00 2.73
2054 2100 3.948719 TCCACACCGGAAGCACCC 61.949 66.667 9.46 0.00 42.52 4.61
2061 2107 2.105128 CGGAAGCACCCTAGCGAG 59.895 66.667 0.00 0.00 40.15 5.03
2110 2177 1.612146 TGGCGATTCCTCCAGGACA 60.612 57.895 0.00 0.00 45.39 4.02
2125 2192 0.453390 GGACATAAGCAGCACCAAGC 59.547 55.000 0.00 0.00 46.19 4.01
2180 2247 2.816958 CGTGCTCAGCGAGGCAAT 60.817 61.111 0.00 0.00 40.26 3.56
2286 2353 2.278596 GCGATCGCGAACCTGCTA 60.279 61.111 26.12 0.00 40.82 3.49
2350 2417 3.505184 CGCAACACGGGGCCATAC 61.505 66.667 4.39 0.00 38.44 2.39
2354 2421 1.663695 CAACACGGGGCCATACTAAG 58.336 55.000 4.39 0.00 0.00 2.18
2454 2539 2.103263 AGAGCCGACAACAGTTTCTCTT 59.897 45.455 0.00 0.00 0.00 2.85
2548 2645 1.966354 TGCAGAGCTCACTGAAGAGAA 59.034 47.619 17.77 0.00 39.94 2.87
2551 2648 3.368220 GCAGAGCTCACTGAAGAGAATGA 60.368 47.826 17.77 0.00 39.94 2.57
2611 2711 5.631026 GCGTCAAGCTGATCAAATTCTTTA 58.369 37.500 0.00 0.00 44.04 1.85
2614 2714 6.348458 CGTCAAGCTGATCAAATTCTTTACCA 60.348 38.462 0.00 0.00 0.00 3.25
2625 2725 1.787012 TCTTTACCAAGAACGCGACC 58.213 50.000 15.93 3.28 35.99 4.79
2651 2751 6.349973 TCTTGAAGAAATGCATATCGACAC 57.650 37.500 0.00 0.00 0.00 3.67
2704 2804 4.832266 ACAGCAAGGTTAAAACATGGATCA 59.168 37.500 0.00 0.00 0.00 2.92
2779 2882 2.713895 TGAGTCAAGAGAACTCTGCG 57.286 50.000 5.06 0.85 40.36 5.18
2782 2885 1.271102 AGTCAAGAGAACTCTGCGTCC 59.729 52.381 5.06 0.00 40.36 4.79
2840 2943 8.647796 TCAAGTATTCATCGTTAATACAGGGAT 58.352 33.333 14.87 0.00 40.65 3.85
2843 2946 8.816894 AGTATTCATCGTTAATACAGGGATGAT 58.183 33.333 14.87 0.00 41.99 2.45
2899 3002 3.769300 GGCCACTGATAAAATTTCTGGGT 59.231 43.478 0.00 0.00 0.00 4.51
2900 3003 4.953579 GGCCACTGATAAAATTTCTGGGTA 59.046 41.667 0.00 0.00 0.00 3.69
2902 3005 6.405842 GGCCACTGATAAAATTTCTGGGTAAG 60.406 42.308 0.00 0.00 0.00 2.34
2906 3009 8.960591 CACTGATAAAATTTCTGGGTAAGATGT 58.039 33.333 0.00 0.00 33.93 3.06
2912 3015 7.718334 AAATTTCTGGGTAAGATGTAAAGGG 57.282 36.000 0.00 0.00 33.93 3.95
2913 3016 3.926058 TCTGGGTAAGATGTAAAGGGC 57.074 47.619 0.00 0.00 0.00 5.19
2914 3017 3.186283 TCTGGGTAAGATGTAAAGGGCA 58.814 45.455 0.00 0.00 0.00 5.36
2915 3018 3.785887 TCTGGGTAAGATGTAAAGGGCAT 59.214 43.478 0.00 0.00 0.00 4.40
2916 3019 3.885297 CTGGGTAAGATGTAAAGGGCATG 59.115 47.826 0.00 0.00 0.00 4.06
2917 3020 3.525609 TGGGTAAGATGTAAAGGGCATGA 59.474 43.478 0.00 0.00 0.00 3.07
2918 3021 4.017958 TGGGTAAGATGTAAAGGGCATGAA 60.018 41.667 0.00 0.00 0.00 2.57
2919 3022 4.338400 GGGTAAGATGTAAAGGGCATGAAC 59.662 45.833 0.00 0.00 0.00 3.18
2920 3023 5.193679 GGTAAGATGTAAAGGGCATGAACT 58.806 41.667 0.00 0.00 0.00 3.01
2921 3024 6.354130 GGTAAGATGTAAAGGGCATGAACTA 58.646 40.000 0.00 0.00 0.00 2.24
2922 3025 6.998673 GGTAAGATGTAAAGGGCATGAACTAT 59.001 38.462 0.00 0.00 0.00 2.12
2923 3026 6.949352 AAGATGTAAAGGGCATGAACTATG 57.051 37.500 0.00 0.00 39.88 2.23
2924 3027 6.252599 AGATGTAAAGGGCATGAACTATGA 57.747 37.500 0.00 0.00 39.21 2.15
2925 3028 6.845908 AGATGTAAAGGGCATGAACTATGAT 58.154 36.000 0.00 0.00 39.21 2.45
2926 3029 6.713903 AGATGTAAAGGGCATGAACTATGATG 59.286 38.462 0.00 0.00 39.21 3.07
2927 3030 6.000246 TGTAAAGGGCATGAACTATGATGA 58.000 37.500 0.00 0.00 39.21 2.92
2928 3031 6.057533 TGTAAAGGGCATGAACTATGATGAG 58.942 40.000 0.00 0.00 39.21 2.90
2929 3032 5.378230 AAAGGGCATGAACTATGATGAGA 57.622 39.130 0.00 0.00 39.21 3.27
2930 3033 5.378230 AAGGGCATGAACTATGATGAGAA 57.622 39.130 0.00 0.00 39.21 2.87
2931 3034 5.378230 AGGGCATGAACTATGATGAGAAA 57.622 39.130 0.00 0.00 39.21 2.52
2932 3035 5.759059 AGGGCATGAACTATGATGAGAAAA 58.241 37.500 0.00 0.00 39.21 2.29
2933 3036 6.189859 AGGGCATGAACTATGATGAGAAAAA 58.810 36.000 0.00 0.00 39.21 1.94
2964 3067 9.920946 TTGAGGCACCTATATTAAATTTTCTCT 57.079 29.630 0.00 0.00 0.00 3.10
2965 3068 9.561069 TGAGGCACCTATATTAAATTTTCTCTC 57.439 33.333 0.00 0.00 0.00 3.20
2966 3069 8.926092 AGGCACCTATATTAAATTTTCTCTCC 57.074 34.615 0.00 0.00 0.00 3.71
2967 3070 7.945109 AGGCACCTATATTAAATTTTCTCTCCC 59.055 37.037 0.00 0.00 0.00 4.30
2968 3071 7.724061 GGCACCTATATTAAATTTTCTCTCCCA 59.276 37.037 0.00 0.00 0.00 4.37
2969 3072 9.301897 GCACCTATATTAAATTTTCTCTCCCAT 57.698 33.333 0.00 0.00 0.00 4.00
2971 3074 9.301897 ACCTATATTAAATTTTCTCTCCCATGC 57.698 33.333 0.00 0.00 0.00 4.06
2972 3075 9.300681 CCTATATTAAATTTTCTCTCCCATGCA 57.699 33.333 0.00 0.00 0.00 3.96
2975 3078 3.881937 AATTTTCTCTCCCATGCAAGC 57.118 42.857 0.00 0.00 0.00 4.01
2976 3079 2.592102 TTTTCTCTCCCATGCAAGCT 57.408 45.000 0.00 0.00 0.00 3.74
2977 3080 2.119801 TTTCTCTCCCATGCAAGCTC 57.880 50.000 0.00 0.00 0.00 4.09
2978 3081 0.254178 TTCTCTCCCATGCAAGCTCC 59.746 55.000 0.00 0.00 0.00 4.70
2979 3082 0.911045 TCTCTCCCATGCAAGCTCCA 60.911 55.000 0.00 0.00 0.00 3.86
2980 3083 0.183014 CTCTCCCATGCAAGCTCCAT 59.817 55.000 0.00 0.00 0.00 3.41
2981 3084 0.627451 TCTCCCATGCAAGCTCCATT 59.373 50.000 0.00 0.00 0.00 3.16
2982 3085 1.845791 TCTCCCATGCAAGCTCCATTA 59.154 47.619 0.00 0.00 0.00 1.90
2983 3086 2.158711 TCTCCCATGCAAGCTCCATTAG 60.159 50.000 0.00 0.00 0.00 1.73
2984 3087 1.565759 TCCCATGCAAGCTCCATTAGT 59.434 47.619 0.00 0.00 0.00 2.24
2985 3088 1.679680 CCCATGCAAGCTCCATTAGTG 59.320 52.381 0.00 0.00 0.00 2.74
3001 3104 6.421377 CATTAGTGGACATCATCAACGAAA 57.579 37.500 0.00 0.00 36.21 3.46
3002 3105 7.019774 CATTAGTGGACATCATCAACGAAAT 57.980 36.000 0.00 0.00 36.21 2.17
3003 3106 8.141835 CATTAGTGGACATCATCAACGAAATA 57.858 34.615 0.00 0.00 36.21 1.40
3004 3107 8.611757 CATTAGTGGACATCATCAACGAAATAA 58.388 33.333 0.00 0.00 36.21 1.40
3005 3108 8.554835 TTAGTGGACATCATCAACGAAATAAA 57.445 30.769 0.00 0.00 36.21 1.40
3006 3109 7.447374 AGTGGACATCATCAACGAAATAAAA 57.553 32.000 0.00 0.00 36.21 1.52
3007 3110 7.881142 AGTGGACATCATCAACGAAATAAAAA 58.119 30.769 0.00 0.00 36.21 1.94
3035 3138 7.986085 AAAACTTTAGTACACATGCATCTCT 57.014 32.000 0.00 0.00 0.00 3.10
3036 3139 7.986085 AAACTTTAGTACACATGCATCTCTT 57.014 32.000 0.00 0.00 0.00 2.85
3037 3140 7.602517 AACTTTAGTACACATGCATCTCTTC 57.397 36.000 0.00 0.00 0.00 2.87
3038 3141 6.940739 ACTTTAGTACACATGCATCTCTTCT 58.059 36.000 0.00 0.00 0.00 2.85
3039 3142 7.038659 ACTTTAGTACACATGCATCTCTTCTC 58.961 38.462 0.00 0.00 0.00 2.87
3040 3143 6.782082 TTAGTACACATGCATCTCTTCTCT 57.218 37.500 0.00 0.00 0.00 3.10
3041 3144 5.674052 AGTACACATGCATCTCTTCTCTT 57.326 39.130 0.00 0.00 0.00 2.85
3042 3145 6.047511 AGTACACATGCATCTCTTCTCTTT 57.952 37.500 0.00 0.00 0.00 2.52
3043 3146 7.175347 AGTACACATGCATCTCTTCTCTTTA 57.825 36.000 0.00 0.00 0.00 1.85
3044 3147 7.038659 AGTACACATGCATCTCTTCTCTTTAC 58.961 38.462 0.00 0.00 0.00 2.01
3045 3148 6.047511 ACACATGCATCTCTTCTCTTTACT 57.952 37.500 0.00 0.00 0.00 2.24
3046 3149 6.471146 ACACATGCATCTCTTCTCTTTACTT 58.529 36.000 0.00 0.00 0.00 2.24
3047 3150 6.939163 ACACATGCATCTCTTCTCTTTACTTT 59.061 34.615 0.00 0.00 0.00 2.66
3048 3151 8.097038 ACACATGCATCTCTTCTCTTTACTTTA 58.903 33.333 0.00 0.00 0.00 1.85
3049 3152 9.107177 CACATGCATCTCTTCTCTTTACTTTAT 57.893 33.333 0.00 0.00 0.00 1.40
3050 3153 9.678260 ACATGCATCTCTTCTCTTTACTTTATT 57.322 29.630 0.00 0.00 0.00 1.40
3053 3156 9.950496 TGCATCTCTTCTCTTTACTTTATTCTT 57.050 29.630 0.00 0.00 0.00 2.52
3081 3184 5.941555 TTTTTACATGGGACCACACTTTT 57.058 34.783 0.00 0.00 0.00 2.27
3082 3185 5.523438 TTTTACATGGGACCACACTTTTC 57.477 39.130 0.00 0.00 0.00 2.29
3083 3186 1.995376 ACATGGGACCACACTTTTCC 58.005 50.000 0.00 0.00 0.00 3.13
3085 3188 4.513777 GGGACCACACTTTTCCCC 57.486 61.111 0.00 0.00 43.07 4.81
3086 3189 1.539665 GGGACCACACTTTTCCCCA 59.460 57.895 0.00 0.00 43.07 4.96
3087 3190 0.105913 GGGACCACACTTTTCCCCAA 60.106 55.000 0.00 0.00 43.07 4.12
3088 3191 1.328279 GGACCACACTTTTCCCCAAG 58.672 55.000 0.00 0.00 0.00 3.61
3089 3192 0.673985 GACCACACTTTTCCCCAAGC 59.326 55.000 0.00 0.00 0.00 4.01
3090 3193 0.032615 ACCACACTTTTCCCCAAGCA 60.033 50.000 0.00 0.00 0.00 3.91
3091 3194 0.389025 CCACACTTTTCCCCAAGCAC 59.611 55.000 0.00 0.00 0.00 4.40
3092 3195 0.389025 CACACTTTTCCCCAAGCACC 59.611 55.000 0.00 0.00 0.00 5.01
3093 3196 0.759060 ACACTTTTCCCCAAGCACCC 60.759 55.000 0.00 0.00 0.00 4.61
3094 3197 1.530655 ACTTTTCCCCAAGCACCCG 60.531 57.895 0.00 0.00 0.00 5.28
3095 3198 2.203567 TTTTCCCCAAGCACCCGG 60.204 61.111 0.00 0.00 0.00 5.73
3096 3199 4.986708 TTTCCCCAAGCACCCGGC 62.987 66.667 0.00 0.00 45.30 6.13
3105 3208 2.124736 GCACCCGGCTATTGCAGA 60.125 61.111 0.00 0.00 41.91 4.26
3106 3209 2.182842 GCACCCGGCTATTGCAGAG 61.183 63.158 0.00 0.00 41.91 3.35
3107 3210 1.524621 CACCCGGCTATTGCAGAGG 60.525 63.158 0.00 3.70 41.91 3.69
3108 3211 1.689233 ACCCGGCTATTGCAGAGGA 60.689 57.895 0.00 0.00 41.91 3.71
3109 3212 1.056700 ACCCGGCTATTGCAGAGGAT 61.057 55.000 0.00 0.00 41.91 3.24
3110 3213 0.321122 CCCGGCTATTGCAGAGGATC 60.321 60.000 0.00 0.00 41.91 3.36
3111 3214 0.321122 CCGGCTATTGCAGAGGATCC 60.321 60.000 2.48 2.48 41.91 3.36
3112 3215 0.321122 CGGCTATTGCAGAGGATCCC 60.321 60.000 8.55 0.00 41.91 3.85
3113 3216 0.767375 GGCTATTGCAGAGGATCCCA 59.233 55.000 8.55 0.00 41.91 4.37
3114 3217 1.544314 GGCTATTGCAGAGGATCCCAC 60.544 57.143 8.55 3.00 41.91 4.61
3115 3218 1.419387 GCTATTGCAGAGGATCCCACT 59.581 52.381 8.55 5.63 39.41 4.00
3116 3219 2.158696 GCTATTGCAGAGGATCCCACTT 60.159 50.000 8.55 0.00 39.41 3.16
3117 3220 2.725221 ATTGCAGAGGATCCCACTTC 57.275 50.000 8.55 3.71 33.66 3.01
3118 3221 0.620556 TTGCAGAGGATCCCACTTCC 59.379 55.000 8.55 3.04 33.66 3.46
3119 3222 1.274703 TGCAGAGGATCCCACTTCCC 61.275 60.000 8.55 0.73 33.66 3.97
3120 3223 1.988982 GCAGAGGATCCCACTTCCCC 61.989 65.000 8.55 0.00 33.66 4.81
3121 3224 0.621571 CAGAGGATCCCACTTCCCCA 60.622 60.000 8.55 0.00 33.66 4.96
3122 3225 0.348370 AGAGGATCCCACTTCCCCAT 59.652 55.000 8.55 0.00 33.66 4.00
3123 3226 0.767998 GAGGATCCCACTTCCCCATC 59.232 60.000 8.55 0.00 33.45 3.51
3124 3227 0.046242 AGGATCCCACTTCCCCATCA 59.954 55.000 8.55 0.00 33.45 3.07
3125 3228 1.152649 GGATCCCACTTCCCCATCAT 58.847 55.000 0.00 0.00 0.00 2.45
3126 3229 2.089408 AGGATCCCACTTCCCCATCATA 60.089 50.000 8.55 0.00 33.45 2.15
3127 3230 2.716424 GGATCCCACTTCCCCATCATAA 59.284 50.000 0.00 0.00 0.00 1.90
3128 3231 3.498661 GGATCCCACTTCCCCATCATAAC 60.499 52.174 0.00 0.00 0.00 1.89
3129 3232 1.850345 TCCCACTTCCCCATCATAACC 59.150 52.381 0.00 0.00 0.00 2.85
3130 3233 1.852965 CCCACTTCCCCATCATAACCT 59.147 52.381 0.00 0.00 0.00 3.50
3131 3234 3.053077 CCCACTTCCCCATCATAACCTA 58.947 50.000 0.00 0.00 0.00 3.08
3132 3235 3.657727 CCCACTTCCCCATCATAACCTAT 59.342 47.826 0.00 0.00 0.00 2.57
3133 3236 4.106341 CCCACTTCCCCATCATAACCTATT 59.894 45.833 0.00 0.00 0.00 1.73
3134 3237 5.400189 CCCACTTCCCCATCATAACCTATTT 60.400 44.000 0.00 0.00 0.00 1.40
3135 3238 5.770162 CCACTTCCCCATCATAACCTATTTC 59.230 44.000 0.00 0.00 0.00 2.17
3136 3239 6.410853 CCACTTCCCCATCATAACCTATTTCT 60.411 42.308 0.00 0.00 0.00 2.52
3137 3240 6.712547 CACTTCCCCATCATAACCTATTTCTC 59.287 42.308 0.00 0.00 0.00 2.87
3138 3241 5.843019 TCCCCATCATAACCTATTTCTCC 57.157 43.478 0.00 0.00 0.00 3.71
3139 3242 5.486332 TCCCCATCATAACCTATTTCTCCT 58.514 41.667 0.00 0.00 0.00 3.69
3140 3243 5.310594 TCCCCATCATAACCTATTTCTCCTG 59.689 44.000 0.00 0.00 0.00 3.86
3141 3244 5.310594 CCCCATCATAACCTATTTCTCCTGA 59.689 44.000 0.00 0.00 0.00 3.86
3142 3245 6.234177 CCCATCATAACCTATTTCTCCTGAC 58.766 44.000 0.00 0.00 0.00 3.51
3143 3246 6.043706 CCCATCATAACCTATTTCTCCTGACT 59.956 42.308 0.00 0.00 0.00 3.41
3144 3247 7.158021 CCATCATAACCTATTTCTCCTGACTC 58.842 42.308 0.00 0.00 0.00 3.36
3145 3248 6.732896 TCATAACCTATTTCTCCTGACTCC 57.267 41.667 0.00 0.00 0.00 3.85
3146 3249 5.302059 TCATAACCTATTTCTCCTGACTCCG 59.698 44.000 0.00 0.00 0.00 4.63
3147 3250 3.383698 ACCTATTTCTCCTGACTCCGA 57.616 47.619 0.00 0.00 0.00 4.55
3148 3251 3.917300 ACCTATTTCTCCTGACTCCGAT 58.083 45.455 0.00 0.00 0.00 4.18
3149 3252 3.892588 ACCTATTTCTCCTGACTCCGATC 59.107 47.826 0.00 0.00 0.00 3.69
3150 3253 3.257127 CCTATTTCTCCTGACTCCGATCC 59.743 52.174 0.00 0.00 0.00 3.36
3151 3254 2.534042 TTTCTCCTGACTCCGATCCT 57.466 50.000 0.00 0.00 0.00 3.24
3152 3255 3.664551 TTTCTCCTGACTCCGATCCTA 57.335 47.619 0.00 0.00 0.00 2.94
3153 3256 2.642154 TCTCCTGACTCCGATCCTAC 57.358 55.000 0.00 0.00 0.00 3.18
3154 3257 1.844497 TCTCCTGACTCCGATCCTACA 59.156 52.381 0.00 0.00 0.00 2.74
3155 3258 2.443632 TCTCCTGACTCCGATCCTACAT 59.556 50.000 0.00 0.00 0.00 2.29
3156 3259 2.556189 CTCCTGACTCCGATCCTACATG 59.444 54.545 0.00 0.00 0.00 3.21
3157 3260 1.615883 CCTGACTCCGATCCTACATGG 59.384 57.143 0.00 0.00 37.10 3.66
3158 3261 1.000283 CTGACTCCGATCCTACATGGC 60.000 57.143 0.00 0.00 35.26 4.40
3159 3262 1.040646 GACTCCGATCCTACATGGCA 58.959 55.000 0.00 0.00 35.26 4.92
3160 3263 1.620819 GACTCCGATCCTACATGGCAT 59.379 52.381 0.00 0.00 35.26 4.40
3161 3264 1.345741 ACTCCGATCCTACATGGCATG 59.654 52.381 25.31 25.31 35.26 4.06
3162 3265 1.345741 CTCCGATCCTACATGGCATGT 59.654 52.381 33.18 33.18 46.92 3.21
3163 3266 1.070601 TCCGATCCTACATGGCATGTG 59.929 52.381 36.61 26.16 44.60 3.21
3164 3267 1.070601 CCGATCCTACATGGCATGTGA 59.929 52.381 36.61 27.62 44.60 3.58
3165 3268 2.410939 CGATCCTACATGGCATGTGAG 58.589 52.381 36.61 27.60 44.60 3.51
3166 3269 2.775890 GATCCTACATGGCATGTGAGG 58.224 52.381 36.61 32.78 44.60 3.86
3167 3270 0.181114 TCCTACATGGCATGTGAGGC 59.819 55.000 36.61 0.00 44.60 4.70
3179 3282 3.731547 TGAGGCATCACCCAGAGG 58.268 61.111 0.00 0.00 40.58 3.69
3185 3288 3.319135 CATCACCCAGAGGCTATGC 57.681 57.895 2.97 0.00 36.11 3.14
3186 3289 0.471191 CATCACCCAGAGGCTATGCA 59.529 55.000 2.97 0.00 36.11 3.96
3187 3290 1.073444 CATCACCCAGAGGCTATGCAT 59.927 52.381 3.79 3.79 36.11 3.96
3188 3291 1.216064 TCACCCAGAGGCTATGCATT 58.784 50.000 3.54 0.00 36.11 3.56
3189 3292 1.134007 TCACCCAGAGGCTATGCATTG 60.134 52.381 3.54 3.55 36.11 2.82
3190 3293 0.184451 ACCCAGAGGCTATGCATTGG 59.816 55.000 3.54 5.04 36.11 3.16
3191 3294 1.177256 CCCAGAGGCTATGCATTGGC 61.177 60.000 23.68 23.68 41.68 4.52
3192 3295 1.177256 CCAGAGGCTATGCATTGGCC 61.177 60.000 26.45 26.29 45.57 5.36
3198 3301 1.753073 GGCTATGCATTGGCCATATCC 59.247 52.381 27.57 9.76 44.69 2.59
3221 3324 7.556844 TCCTAATAGGTTAGTTTTGCTCTCTG 58.443 38.462 6.17 0.00 36.40 3.35
3229 3332 3.416156 AGTTTTGCTCTCTGATGTTCCC 58.584 45.455 0.00 0.00 0.00 3.97
3230 3333 3.073650 AGTTTTGCTCTCTGATGTTCCCT 59.926 43.478 0.00 0.00 0.00 4.20
3231 3334 3.795688 TTTGCTCTCTGATGTTCCCTT 57.204 42.857 0.00 0.00 0.00 3.95
3232 3335 3.795688 TTGCTCTCTGATGTTCCCTTT 57.204 42.857 0.00 0.00 0.00 3.11
3233 3336 3.795688 TGCTCTCTGATGTTCCCTTTT 57.204 42.857 0.00 0.00 0.00 2.27
3234 3337 4.104383 TGCTCTCTGATGTTCCCTTTTT 57.896 40.909 0.00 0.00 0.00 1.94
3235 3338 4.074970 TGCTCTCTGATGTTCCCTTTTTC 58.925 43.478 0.00 0.00 0.00 2.29
3236 3339 3.126000 GCTCTCTGATGTTCCCTTTTTCG 59.874 47.826 0.00 0.00 0.00 3.46
3237 3340 4.569943 CTCTCTGATGTTCCCTTTTTCGA 58.430 43.478 0.00 0.00 0.00 3.71
3238 3341 5.165961 TCTCTGATGTTCCCTTTTTCGAT 57.834 39.130 0.00 0.00 0.00 3.59
3239 3342 4.937620 TCTCTGATGTTCCCTTTTTCGATG 59.062 41.667 0.00 0.00 0.00 3.84
3240 3343 4.651778 TCTGATGTTCCCTTTTTCGATGT 58.348 39.130 0.00 0.00 0.00 3.06
3241 3344 5.070001 TCTGATGTTCCCTTTTTCGATGTT 58.930 37.500 0.00 0.00 0.00 2.71
3242 3345 5.048782 TCTGATGTTCCCTTTTTCGATGTTG 60.049 40.000 0.00 0.00 0.00 3.33
3243 3346 4.582656 TGATGTTCCCTTTTTCGATGTTGT 59.417 37.500 0.00 0.00 0.00 3.32
3244 3347 4.993029 TGTTCCCTTTTTCGATGTTGTT 57.007 36.364 0.00 0.00 0.00 2.83
3245 3348 4.927422 TGTTCCCTTTTTCGATGTTGTTC 58.073 39.130 0.00 0.00 0.00 3.18
3246 3349 4.642885 TGTTCCCTTTTTCGATGTTGTTCT 59.357 37.500 0.00 0.00 0.00 3.01
3247 3350 4.829064 TCCCTTTTTCGATGTTGTTCTG 57.171 40.909 0.00 0.00 0.00 3.02
3248 3351 3.004315 TCCCTTTTTCGATGTTGTTCTGC 59.996 43.478 0.00 0.00 0.00 4.26
3249 3352 3.004734 CCCTTTTTCGATGTTGTTCTGCT 59.995 43.478 0.00 0.00 0.00 4.24
3250 3353 4.499696 CCCTTTTTCGATGTTGTTCTGCTT 60.500 41.667 0.00 0.00 0.00 3.91
3251 3354 5.043248 CCTTTTTCGATGTTGTTCTGCTTT 58.957 37.500 0.00 0.00 0.00 3.51
3252 3355 5.051508 CCTTTTTCGATGTTGTTCTGCTTTG 60.052 40.000 0.00 0.00 0.00 2.77
3253 3356 3.624326 TTCGATGTTGTTCTGCTTTGG 57.376 42.857 0.00 0.00 0.00 3.28
3254 3357 2.571212 TCGATGTTGTTCTGCTTTGGT 58.429 42.857 0.00 0.00 0.00 3.67
3255 3358 2.290367 TCGATGTTGTTCTGCTTTGGTG 59.710 45.455 0.00 0.00 0.00 4.17
3256 3359 2.033299 CGATGTTGTTCTGCTTTGGTGT 59.967 45.455 0.00 0.00 0.00 4.16
3257 3360 2.937469 TGTTGTTCTGCTTTGGTGTG 57.063 45.000 0.00 0.00 0.00 3.82
3258 3361 1.476085 TGTTGTTCTGCTTTGGTGTGG 59.524 47.619 0.00 0.00 0.00 4.17
3259 3362 1.476488 GTTGTTCTGCTTTGGTGTGGT 59.524 47.619 0.00 0.00 0.00 4.16
3260 3363 1.102154 TGTTCTGCTTTGGTGTGGTG 58.898 50.000 0.00 0.00 0.00 4.17
3261 3364 0.385390 GTTCTGCTTTGGTGTGGTGG 59.615 55.000 0.00 0.00 0.00 4.61
3262 3365 0.033601 TTCTGCTTTGGTGTGGTGGT 60.034 50.000 0.00 0.00 0.00 4.16
3263 3366 0.465460 TCTGCTTTGGTGTGGTGGTC 60.465 55.000 0.00 0.00 0.00 4.02
3264 3367 1.454847 TGCTTTGGTGTGGTGGTCC 60.455 57.895 0.00 0.00 0.00 4.46
3265 3368 2.200337 GCTTTGGTGTGGTGGTCCC 61.200 63.158 0.00 0.00 0.00 4.46
3266 3369 1.536676 CTTTGGTGTGGTGGTCCCT 59.463 57.895 0.00 0.00 0.00 4.20
3267 3370 0.768622 CTTTGGTGTGGTGGTCCCTA 59.231 55.000 0.00 0.00 0.00 3.53
3268 3371 1.354368 CTTTGGTGTGGTGGTCCCTAT 59.646 52.381 0.00 0.00 0.00 2.57
3269 3372 1.451449 TTGGTGTGGTGGTCCCTATT 58.549 50.000 0.00 0.00 0.00 1.73
3270 3373 1.451449 TGGTGTGGTGGTCCCTATTT 58.549 50.000 0.00 0.00 0.00 1.40
3271 3374 1.783979 TGGTGTGGTGGTCCCTATTTT 59.216 47.619 0.00 0.00 0.00 1.82
3272 3375 2.224917 TGGTGTGGTGGTCCCTATTTTC 60.225 50.000 0.00 0.00 0.00 2.29
3273 3376 2.041216 GGTGTGGTGGTCCCTATTTTCT 59.959 50.000 0.00 0.00 0.00 2.52
3274 3377 3.344515 GTGTGGTGGTCCCTATTTTCTC 58.655 50.000 0.00 0.00 0.00 2.87
3275 3378 3.009143 GTGTGGTGGTCCCTATTTTCTCT 59.991 47.826 0.00 0.00 0.00 3.10
3276 3379 4.224370 GTGTGGTGGTCCCTATTTTCTCTA 59.776 45.833 0.00 0.00 0.00 2.43
3277 3380 4.847512 TGTGGTGGTCCCTATTTTCTCTAA 59.152 41.667 0.00 0.00 0.00 2.10
3278 3381 5.311121 TGTGGTGGTCCCTATTTTCTCTAAA 59.689 40.000 0.00 0.00 0.00 1.85
3279 3382 6.183361 TGTGGTGGTCCCTATTTTCTCTAAAA 60.183 38.462 0.00 0.00 38.87 1.52
3345 3448 7.659652 AATGAGTTTGAGTCTACTACTTTGC 57.340 36.000 0.00 0.00 39.07 3.68
3346 3449 6.156748 TGAGTTTGAGTCTACTACTTTGCA 57.843 37.500 0.00 0.00 39.07 4.08
3347 3450 6.578944 TGAGTTTGAGTCTACTACTTTGCAA 58.421 36.000 0.00 0.00 39.07 4.08
3348 3451 7.217200 TGAGTTTGAGTCTACTACTTTGCAAT 58.783 34.615 0.00 0.00 39.07 3.56
3349 3452 7.715249 TGAGTTTGAGTCTACTACTTTGCAATT 59.285 33.333 0.00 0.00 39.07 2.32
3350 3453 8.451908 AGTTTGAGTCTACTACTTTGCAATTT 57.548 30.769 0.00 0.00 39.07 1.82
3351 3454 8.903820 AGTTTGAGTCTACTACTTTGCAATTTT 58.096 29.630 0.00 0.00 39.07 1.82
3352 3455 9.516314 GTTTGAGTCTACTACTTTGCAATTTTT 57.484 29.630 0.00 0.00 39.07 1.94
3353 3456 9.515020 TTTGAGTCTACTACTTTGCAATTTTTG 57.485 29.630 0.00 0.00 39.07 2.44
3354 3457 8.220755 TGAGTCTACTACTTTGCAATTTTTGT 57.779 30.769 0.00 0.00 39.07 2.83
3355 3458 8.682710 TGAGTCTACTACTTTGCAATTTTTGTT 58.317 29.630 0.00 0.00 39.07 2.83
3400 3503 9.313118 CATCCTTAAATAAGTGGTTATTTTGCC 57.687 33.333 8.09 0.00 43.45 4.52
3401 3504 7.540299 TCCTTAAATAAGTGGTTATTTTGCCG 58.460 34.615 8.09 0.00 43.45 5.69
3402 3505 7.393796 TCCTTAAATAAGTGGTTATTTTGCCGA 59.606 33.333 8.09 0.00 43.45 5.54
3403 3506 8.030106 CCTTAAATAAGTGGTTATTTTGCCGAA 58.970 33.333 8.09 0.00 43.45 4.30
3404 3507 8.745464 TTAAATAAGTGGTTATTTTGCCGAAC 57.255 30.769 8.09 0.00 43.45 3.95
3405 3508 6.584185 AATAAGTGGTTATTTTGCCGAACT 57.416 33.333 0.00 0.00 35.66 3.01
3406 3509 3.915437 AGTGGTTATTTTGCCGAACTG 57.085 42.857 0.00 0.00 0.00 3.16
3407 3510 3.482436 AGTGGTTATTTTGCCGAACTGA 58.518 40.909 0.00 0.00 0.00 3.41
3408 3511 3.886505 AGTGGTTATTTTGCCGAACTGAA 59.113 39.130 0.00 0.00 0.00 3.02
3409 3512 4.339814 AGTGGTTATTTTGCCGAACTGAAA 59.660 37.500 0.00 0.00 0.00 2.69
3410 3513 5.010617 AGTGGTTATTTTGCCGAACTGAAAT 59.989 36.000 0.00 0.00 0.00 2.17
3411 3514 5.694458 GTGGTTATTTTGCCGAACTGAAATT 59.306 36.000 0.00 0.00 0.00 1.82
3412 3515 5.923684 TGGTTATTTTGCCGAACTGAAATTC 59.076 36.000 0.00 0.00 0.00 2.17
3413 3516 5.923684 GGTTATTTTGCCGAACTGAAATTCA 59.076 36.000 0.00 0.00 0.00 2.57
3414 3517 6.422400 GGTTATTTTGCCGAACTGAAATTCAA 59.578 34.615 0.00 0.00 0.00 2.69
3415 3518 7.042389 GGTTATTTTGCCGAACTGAAATTCAAA 60.042 33.333 0.00 0.00 0.00 2.69
3416 3519 6.917217 ATTTTGCCGAACTGAAATTCAAAA 57.083 29.167 0.00 0.00 36.69 2.44
3417 3520 5.710613 TTTGCCGAACTGAAATTCAAAAC 57.289 34.783 0.00 0.00 0.00 2.43
3418 3521 4.647424 TGCCGAACTGAAATTCAAAACT 57.353 36.364 0.00 0.00 0.00 2.66
3419 3522 4.606961 TGCCGAACTGAAATTCAAAACTC 58.393 39.130 0.00 0.00 0.00 3.01
3420 3523 4.097135 TGCCGAACTGAAATTCAAAACTCA 59.903 37.500 0.00 0.00 0.00 3.41
3421 3524 5.221224 TGCCGAACTGAAATTCAAAACTCAT 60.221 36.000 0.00 0.00 0.00 2.90
3422 3525 5.691754 GCCGAACTGAAATTCAAAACTCATT 59.308 36.000 0.00 0.00 0.00 2.57
3423 3526 6.346040 GCCGAACTGAAATTCAAAACTCATTG 60.346 38.462 0.00 0.00 0.00 2.82
3424 3527 6.144402 CCGAACTGAAATTCAAAACTCATTGG 59.856 38.462 0.00 0.00 0.00 3.16
3425 3528 6.697019 CGAACTGAAATTCAAAACTCATTGGT 59.303 34.615 0.00 0.00 0.00 3.67
3426 3529 7.306167 CGAACTGAAATTCAAAACTCATTGGTG 60.306 37.037 0.00 0.00 0.00 4.17
3427 3530 6.282930 ACTGAAATTCAAAACTCATTGGTGG 58.717 36.000 0.00 0.00 0.00 4.61
3428 3531 5.055812 TGAAATTCAAAACTCATTGGTGGC 58.944 37.500 0.00 0.00 0.00 5.01
3429 3532 4.686191 AATTCAAAACTCATTGGTGGCA 57.314 36.364 0.00 0.00 0.00 4.92
3430 3533 3.731652 TTCAAAACTCATTGGTGGCAG 57.268 42.857 0.00 0.00 0.00 4.85
3431 3534 1.340889 TCAAAACTCATTGGTGGCAGC 59.659 47.619 10.30 10.30 0.00 5.25
3432 3535 1.342174 CAAAACTCATTGGTGGCAGCT 59.658 47.619 18.53 0.00 0.00 4.24
3433 3536 0.963962 AAACTCATTGGTGGCAGCTG 59.036 50.000 18.53 10.11 0.00 4.24
3434 3537 1.530013 AACTCATTGGTGGCAGCTGC 61.530 55.000 30.88 30.88 41.14 5.25
3435 3538 1.677966 CTCATTGGTGGCAGCTGCT 60.678 57.895 35.82 14.52 41.70 4.24
3436 3539 1.934220 CTCATTGGTGGCAGCTGCTG 61.934 60.000 35.82 25.01 41.70 4.41
3437 3540 1.974875 CATTGGTGGCAGCTGCTGA 60.975 57.895 35.82 21.30 41.70 4.26
3438 3541 1.228644 ATTGGTGGCAGCTGCTGAA 60.229 52.632 35.82 22.68 41.70 3.02
3439 3542 0.828762 ATTGGTGGCAGCTGCTGAAA 60.829 50.000 35.82 24.28 41.70 2.69
3440 3543 0.828762 TTGGTGGCAGCTGCTGAAAT 60.829 50.000 35.82 0.00 41.70 2.17
3441 3544 0.038021 TGGTGGCAGCTGCTGAAATA 59.962 50.000 35.82 16.21 41.70 1.40
3442 3545 0.453390 GGTGGCAGCTGCTGAAATAC 59.547 55.000 35.82 22.88 41.70 1.89
3443 3546 1.457346 GTGGCAGCTGCTGAAATACT 58.543 50.000 35.82 0.00 41.70 2.12
3444 3547 1.815003 GTGGCAGCTGCTGAAATACTT 59.185 47.619 35.82 0.00 41.70 2.24
3445 3548 2.229784 GTGGCAGCTGCTGAAATACTTT 59.770 45.455 35.82 0.00 41.70 2.66
3446 3549 3.440173 GTGGCAGCTGCTGAAATACTTTA 59.560 43.478 35.82 7.28 41.70 1.85
3447 3550 4.096984 GTGGCAGCTGCTGAAATACTTTAT 59.903 41.667 35.82 0.00 41.70 1.40
3448 3551 4.706476 TGGCAGCTGCTGAAATACTTTATT 59.294 37.500 35.82 0.00 41.70 1.40
3449 3552 5.185635 TGGCAGCTGCTGAAATACTTTATTT 59.814 36.000 35.82 0.00 39.90 1.40
3450 3553 6.101997 GGCAGCTGCTGAAATACTTTATTTT 58.898 36.000 35.82 0.00 38.58 1.82
3451 3554 6.591448 GGCAGCTGCTGAAATACTTTATTTTT 59.409 34.615 35.82 0.00 38.58 1.94
3452 3555 7.759433 GGCAGCTGCTGAAATACTTTATTTTTA 59.241 33.333 35.82 0.00 38.58 1.52
3453 3556 8.587111 GCAGCTGCTGAAATACTTTATTTTTAC 58.413 33.333 32.30 4.75 36.99 2.01
3454 3557 9.846248 CAGCTGCTGAAATACTTTATTTTTACT 57.154 29.630 24.88 0.00 38.42 2.24
3480 3583 9.996554 TTGATCTGAAATAGTCTCAAAACTACA 57.003 29.630 0.00 0.00 34.68 2.74
3481 3584 9.996554 TGATCTGAAATAGTCTCAAAACTACAA 57.003 29.630 0.00 0.00 34.68 2.41
3484 3587 8.774586 TCTGAAATAGTCTCAAAACTACAAAGC 58.225 33.333 0.00 0.00 34.68 3.51
3502 3636 4.766404 AAGCAATTAAGTCCAAGGTTCG 57.234 40.909 0.00 0.00 0.00 3.95
3504 3638 3.751698 AGCAATTAAGTCCAAGGTTCGAC 59.248 43.478 0.00 0.00 0.00 4.20
3527 3661 5.221803 ACCTATATGCAGAAAGTCCCATCTG 60.222 44.000 0.00 0.00 44.66 2.90
3543 3677 1.649321 TCTGTGGATGGTGCTCTCTT 58.351 50.000 0.00 0.00 0.00 2.85
3544 3678 1.980765 TCTGTGGATGGTGCTCTCTTT 59.019 47.619 0.00 0.00 0.00 2.52
3561 3695 7.772292 TGCTCTCTTTCGGACTACTTAACTATA 59.228 37.037 0.00 0.00 0.00 1.31
3584 3718 8.910351 ATACTTTTTGGAGACTATATTGGCTC 57.090 34.615 11.21 11.21 0.00 4.70
3603 3737 6.586344 TGGCTCAGTTTCTCAGATATAAAGG 58.414 40.000 0.00 0.00 0.00 3.11
3716 3853 9.445786 ACGAAAACATGTACAAGTTTATTTCTG 57.554 29.630 24.76 17.11 36.98 3.02
3720 3857 9.515020 AAACATGTACAAGTTTATTTCTGTGTG 57.485 29.630 23.64 4.21 36.28 3.82
3736 3873 8.437360 TTTCTGTGTGAATGTGGTCATATATC 57.563 34.615 0.00 0.00 34.24 1.63
3741 3878 2.672961 ATGTGGTCATATATCGGCCG 57.327 50.000 22.12 22.12 31.89 6.13
3755 3892 8.755941 CATATATCGGCCGTCTTTATTTCATAG 58.244 37.037 27.15 2.97 0.00 2.23
3762 3899 6.759827 GGCCGTCTTTATTTCATAGTGTCTAA 59.240 38.462 0.00 0.00 0.00 2.10
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
70 71 1.676635 CGGAGAGTACACCGTCCCA 60.677 63.158 14.81 0.00 43.28 4.37
71 72 3.194719 CGGAGAGTACACCGTCCC 58.805 66.667 14.81 0.11 43.28 4.46
110 111 1.079503 GACGATGTTGGCTCCAGTTC 58.920 55.000 0.00 0.00 0.00 3.01
112 113 0.320771 GTGACGATGTTGGCTCCAGT 60.321 55.000 0.00 0.00 0.00 4.00
130 131 1.500844 GACAGACGACGACGATGGT 59.499 57.895 15.32 8.14 42.66 3.55
136 137 1.080705 CCTTGGGACAGACGACGAC 60.081 63.158 0.00 0.00 42.39 4.34
149 150 0.676782 GACGACCATTCACCCCTTGG 60.677 60.000 0.00 0.00 36.56 3.61
152 153 2.656069 CCGACGACCATTCACCCCT 61.656 63.158 0.00 0.00 0.00 4.79
175 176 2.119611 TGGAAGCCTCCGGAGACA 59.880 61.111 33.39 18.76 45.85 3.41
195 196 2.350498 CCATACGAGGTTAAAGCCGTTG 59.650 50.000 0.00 0.00 36.58 4.10
196 197 2.624636 CCATACGAGGTTAAAGCCGTT 58.375 47.619 0.00 0.00 36.58 4.44
200 201 2.327200 AGGCCATACGAGGTTAAAGC 57.673 50.000 5.01 0.00 0.00 3.51
211 212 2.280865 GCCCACGCTAGGCCATAC 60.281 66.667 5.01 0.00 45.16 2.39
235 236 2.045926 ATCTGCAAGCACCCCGAC 60.046 61.111 0.00 0.00 0.00 4.79
250 251 3.917760 CTCGGCCGAGACCCCATC 61.918 72.222 45.28 0.00 44.53 3.51
351 352 3.041211 CTGGGAGTGAGATTGGGATACA 58.959 50.000 0.00 0.00 39.74 2.29
352 353 2.370189 CCTGGGAGTGAGATTGGGATAC 59.630 54.545 0.00 0.00 0.00 2.24
484 485 5.707242 TGATCTATTCCACCGAGTACATC 57.293 43.478 0.00 0.00 0.00 3.06
502 503 2.186076 GTGGTCGACGATGACTTGATC 58.814 52.381 9.92 0.00 38.91 2.92
517 518 1.269102 CCCATCATCTACGACGTGGTC 60.269 57.143 11.56 0.00 0.00 4.02
521 522 1.740285 GGCCCATCATCTACGACGT 59.260 57.895 5.52 5.52 0.00 4.34
539 540 1.091771 ATGGATGAGCAGCCGAAACG 61.092 55.000 0.00 0.00 40.42 3.60
548 549 0.621280 TCCCTGGACATGGATGAGCA 60.621 55.000 0.00 0.00 0.00 4.26
649 650 0.767375 TGCTTGGCCATATCCTCTCC 59.233 55.000 6.09 0.00 0.00 3.71
678 679 1.578206 CGACCGTCTCAGCAGTCTCA 61.578 60.000 0.00 0.00 0.00 3.27
709 710 2.876645 GTCGAACTGGAGCGCGAG 60.877 66.667 12.10 0.00 33.00 5.03
710 711 4.753877 CGTCGAACTGGAGCGCGA 62.754 66.667 12.10 0.00 32.04 5.87
711 712 4.753877 TCGTCGAACTGGAGCGCG 62.754 66.667 0.00 0.00 0.00 6.86
719 720 0.611062 TCCCACCAGATCGTCGAACT 60.611 55.000 0.00 0.00 0.00 3.01
736 737 0.248296 GCGACGAGATGAGTCACTCC 60.248 60.000 1.24 0.00 38.46 3.85
814 819 3.935818 TGAACCGATCTCTAGTCCTCT 57.064 47.619 0.00 0.00 0.00 3.69
820 825 5.007823 ACGTCAGTTATGAACCGATCTCTAG 59.992 44.000 0.00 0.00 37.14 2.43
844 849 1.962306 GGGCAGGCAACGACGTAAA 60.962 57.895 0.00 0.00 46.39 2.01
847 852 3.918276 TATTTGGGCAGGCAACGACGT 62.918 52.381 0.00 0.00 46.39 4.34
989 999 4.129737 CGGCCATCGTCCACGTCT 62.130 66.667 2.24 0.00 40.80 4.18
1051 1061 3.470888 CGGGGCGAAGTGGAGGAT 61.471 66.667 0.00 0.00 0.00 3.24
1175 1185 2.043939 TCTCCCCAGCTTTGGTAGAGTA 59.956 50.000 8.34 0.00 32.46 2.59
1179 1189 0.543749 CCTCTCCCCAGCTTTGGTAG 59.456 60.000 0.00 0.00 0.00 3.18
1285 1298 1.153628 GCAGGGTAAGCGTCGTGAT 60.154 57.895 0.00 0.00 0.00 3.06
1347 1360 2.631428 CACAACCCGTCGCTGTTG 59.369 61.111 18.59 18.59 45.65 3.33
1348 1361 3.276846 GCACAACCCGTCGCTGTT 61.277 61.111 0.00 0.00 0.00 3.16
1373 1395 2.742372 CGCTTTGGTCCTGGTCCG 60.742 66.667 5.51 0.00 0.00 4.79
1424 1446 3.935993 CGGAGGACTTGGATGTGTT 57.064 52.632 0.00 0.00 0.00 3.32
1452 1474 1.891919 GGTGTCGTTGCAGCCTTCA 60.892 57.895 0.00 0.00 0.00 3.02
1462 1484 1.404391 CGGCTCATAGTAGGTGTCGTT 59.596 52.381 2.97 0.00 0.00 3.85
1482 1513 2.731374 CGGGCGATCTCCTTCTCC 59.269 66.667 0.93 0.00 0.00 3.71
1595 1626 3.037686 AACACGACTGTGGTGGCCA 62.038 57.895 23.67 0.00 46.59 5.36
1664 1695 0.980231 GTGGATGAGGCTCTGGAGGT 60.980 60.000 16.72 0.00 0.00 3.85
1705 1736 1.482593 GACGATGGACTCAAGGTGGAT 59.517 52.381 0.00 0.00 0.00 3.41
1720 1751 1.069765 GCCCGATGGTGATGACGAT 59.930 57.895 0.00 0.00 0.00 3.73
1734 1768 2.330041 GTGTCGTTTGTTGGCCCG 59.670 61.111 0.00 0.00 0.00 6.13
1775 1809 0.337082 TGGGGGAGAAGTATCGTCCA 59.663 55.000 0.00 0.00 31.31 4.02
1778 1812 0.042131 TGGTGGGGGAGAAGTATCGT 59.958 55.000 0.00 0.00 0.00 3.73
1807 1844 1.668419 GCCGAACATTGGAGCACTAT 58.332 50.000 0.00 0.00 0.00 2.12
1832 1869 3.068064 TCCGGAGCATGAGCACGA 61.068 61.111 0.00 0.00 45.49 4.35
1840 1877 4.479993 GCTGCACCTCCGGAGCAT 62.480 66.667 26.87 13.41 46.96 3.79
1873 1910 4.530857 GATGGCGGGGGTCTCGTG 62.531 72.222 0.00 0.00 0.00 4.35
1970 2010 1.069765 CGTGACAAGTCCTGTGGCT 59.930 57.895 0.00 0.00 38.84 4.75
1976 2016 1.837051 TCTGCCCGTGACAAGTCCT 60.837 57.895 0.00 0.00 0.00 3.85
2008 2048 0.109132 CTTTTCTTGTCGCATGGCCC 60.109 55.000 0.00 0.00 0.00 5.80
2042 2082 3.771160 CGCTAGGGTGCTTCCGGT 61.771 66.667 0.00 0.00 37.00 5.28
2044 2084 2.105128 CTCGCTAGGGTGCTTCCG 59.895 66.667 6.70 0.00 37.00 4.30
2054 2100 3.311486 GATTTGGATCCTCCTCGCTAG 57.689 52.381 14.23 0.00 37.46 3.42
2073 2140 0.471211 AGAAGGTCACGAGGTTGGGA 60.471 55.000 0.00 0.00 0.00 4.37
2110 2177 1.542915 CAACTGCTTGGTGCTGCTTAT 59.457 47.619 0.00 0.00 43.25 1.73
2125 2192 1.876156 GTTCACCCTCAGCTTCAACTG 59.124 52.381 0.00 0.00 39.12 3.16
2308 2375 3.112263 TGGTAAGGTTGATCCGGAGATT 58.888 45.455 11.34 0.00 41.99 2.40
2350 2417 4.322049 CCCTTCTATGCGGTCATACCTTAG 60.322 50.000 0.00 0.00 35.66 2.18
2354 2421 1.692519 ACCCTTCTATGCGGTCATACC 59.307 52.381 0.00 0.00 34.22 2.73
2413 2483 2.726760 CTGCGCGGTTGATAAGATCTAC 59.273 50.000 8.83 0.00 34.87 2.59
2454 2539 4.512484 TGTTAACATCGCCATCATCTTCA 58.488 39.130 3.59 0.00 0.00 3.02
2548 2645 1.267806 CAACCGAAACTGCAAGCTCAT 59.732 47.619 0.00 0.00 37.60 2.90
2551 2648 0.465460 TCCAACCGAAACTGCAAGCT 60.465 50.000 0.00 0.00 37.60 3.74
2611 2711 1.952635 GAACGGTCGCGTTCTTGGT 60.953 57.895 17.51 0.00 43.26 3.67
2625 2725 5.898606 GTCGATATGCATTTCTTCAAGAACG 59.101 40.000 3.54 0.00 33.26 3.95
2651 2751 1.002468 CGCACAACTTCCTGTTTCCAG 60.002 52.381 0.00 0.00 36.63 3.86
2704 2804 5.835280 ACTTTCTCATTTTGGATGAACTGGT 59.165 36.000 0.00 0.00 0.00 4.00
2782 2885 2.095110 TGCTGCATCAAAATCCTCGTTG 60.095 45.455 0.00 0.00 0.00 4.10
2840 2943 2.108425 AGCTAGATACCTCGGGACATCA 59.892 50.000 0.00 0.00 0.00 3.07
2843 2946 2.175069 AGAAGCTAGATACCTCGGGACA 59.825 50.000 0.00 0.00 0.00 4.02
2848 2951 3.149005 AGGGAGAAGCTAGATACCTCG 57.851 52.381 0.00 0.00 0.00 4.63
2899 3002 7.801104 TCATAGTTCATGCCCTTTACATCTTA 58.199 34.615 0.00 0.00 34.35 2.10
2900 3003 6.662755 TCATAGTTCATGCCCTTTACATCTT 58.337 36.000 0.00 0.00 34.35 2.40
2902 3005 6.712095 TCATCATAGTTCATGCCCTTTACATC 59.288 38.462 0.00 0.00 34.35 3.06
2906 3009 6.499106 TCTCATCATAGTTCATGCCCTTTA 57.501 37.500 0.00 0.00 34.35 1.85
2907 3010 5.378230 TCTCATCATAGTTCATGCCCTTT 57.622 39.130 0.00 0.00 34.35 3.11
2908 3011 5.378230 TTCTCATCATAGTTCATGCCCTT 57.622 39.130 0.00 0.00 34.35 3.95
2909 3012 5.378230 TTTCTCATCATAGTTCATGCCCT 57.622 39.130 0.00 0.00 34.35 5.19
2910 3013 6.455360 TTTTTCTCATCATAGTTCATGCCC 57.545 37.500 0.00 0.00 34.35 5.36
2938 3041 9.920946 AGAGAAAATTTAATATAGGTGCCTCAA 57.079 29.630 0.00 0.00 0.00 3.02
2939 3042 9.561069 GAGAGAAAATTTAATATAGGTGCCTCA 57.439 33.333 0.00 0.00 0.00 3.86
2940 3043 9.004717 GGAGAGAAAATTTAATATAGGTGCCTC 57.995 37.037 0.00 0.00 0.00 4.70
2941 3044 7.945109 GGGAGAGAAAATTTAATATAGGTGCCT 59.055 37.037 0.00 0.00 0.00 4.75
2942 3045 7.724061 TGGGAGAGAAAATTTAATATAGGTGCC 59.276 37.037 0.00 0.00 0.00 5.01
2943 3046 8.691661 TGGGAGAGAAAATTTAATATAGGTGC 57.308 34.615 0.00 0.00 0.00 5.01
2945 3048 9.301897 GCATGGGAGAGAAAATTTAATATAGGT 57.698 33.333 0.00 0.00 0.00 3.08
2946 3049 9.300681 TGCATGGGAGAGAAAATTTAATATAGG 57.699 33.333 0.00 0.00 0.00 2.57
2949 3052 8.146412 GCTTGCATGGGAGAGAAAATTTAATAT 58.854 33.333 1.34 0.00 0.00 1.28
2950 3053 7.342799 AGCTTGCATGGGAGAGAAAATTTAATA 59.657 33.333 1.34 0.00 0.00 0.98
2951 3054 6.155737 AGCTTGCATGGGAGAGAAAATTTAAT 59.844 34.615 1.34 0.00 0.00 1.40
2952 3055 5.481473 AGCTTGCATGGGAGAGAAAATTTAA 59.519 36.000 1.34 0.00 0.00 1.52
2953 3056 5.018809 AGCTTGCATGGGAGAGAAAATTTA 58.981 37.500 1.34 0.00 0.00 1.40
2954 3057 3.836562 AGCTTGCATGGGAGAGAAAATTT 59.163 39.130 1.34 0.00 0.00 1.82
2955 3058 3.438183 AGCTTGCATGGGAGAGAAAATT 58.562 40.909 1.34 0.00 0.00 1.82
2956 3059 3.022406 GAGCTTGCATGGGAGAGAAAAT 58.978 45.455 1.34 0.00 0.00 1.82
2957 3060 2.440409 GAGCTTGCATGGGAGAGAAAA 58.560 47.619 1.34 0.00 0.00 2.29
2958 3061 1.340405 GGAGCTTGCATGGGAGAGAAA 60.340 52.381 1.34 0.00 0.00 2.52
2959 3062 0.254178 GGAGCTTGCATGGGAGAGAA 59.746 55.000 1.34 0.00 0.00 2.87
2960 3063 0.911045 TGGAGCTTGCATGGGAGAGA 60.911 55.000 1.34 0.00 0.00 3.10
2961 3064 0.183014 ATGGAGCTTGCATGGGAGAG 59.817 55.000 1.34 0.00 0.00 3.20
2962 3065 0.627451 AATGGAGCTTGCATGGGAGA 59.373 50.000 1.34 0.00 0.00 3.71
2963 3066 2.228059 CTAATGGAGCTTGCATGGGAG 58.772 52.381 1.34 0.00 0.00 4.30
2964 3067 1.565759 ACTAATGGAGCTTGCATGGGA 59.434 47.619 1.34 0.00 0.00 4.37
2965 3068 1.679680 CACTAATGGAGCTTGCATGGG 59.320 52.381 1.34 0.00 0.00 4.00
2978 3081 6.421377 TTTCGTTGATGATGTCCACTAATG 57.579 37.500 0.00 0.00 0.00 1.90
2979 3082 8.731275 TTATTTCGTTGATGATGTCCACTAAT 57.269 30.769 0.00 0.00 0.00 1.73
2980 3083 8.554835 TTTATTTCGTTGATGATGTCCACTAA 57.445 30.769 0.00 0.00 0.00 2.24
2981 3084 8.554835 TTTTATTTCGTTGATGATGTCCACTA 57.445 30.769 0.00 0.00 0.00 2.74
2982 3085 7.447374 TTTTATTTCGTTGATGATGTCCACT 57.553 32.000 0.00 0.00 0.00 4.00
3009 3112 9.502091 AGAGATGCATGTGTACTAAAGTTTTTA 57.498 29.630 2.46 0.00 0.00 1.52
3010 3113 8.396272 AGAGATGCATGTGTACTAAAGTTTTT 57.604 30.769 2.46 0.00 0.00 1.94
3011 3114 7.986085 AGAGATGCATGTGTACTAAAGTTTT 57.014 32.000 2.46 0.00 0.00 2.43
3012 3115 7.880195 AGAAGAGATGCATGTGTACTAAAGTTT 59.120 33.333 2.46 0.00 0.00 2.66
3013 3116 7.390027 AGAAGAGATGCATGTGTACTAAAGTT 58.610 34.615 2.46 0.00 0.00 2.66
3014 3117 6.940739 AGAAGAGATGCATGTGTACTAAAGT 58.059 36.000 2.46 0.00 0.00 2.66
3015 3118 7.264221 AGAGAAGAGATGCATGTGTACTAAAG 58.736 38.462 2.46 0.00 0.00 1.85
3016 3119 7.175347 AGAGAAGAGATGCATGTGTACTAAA 57.825 36.000 2.46 0.00 0.00 1.85
3017 3120 6.782082 AGAGAAGAGATGCATGTGTACTAA 57.218 37.500 2.46 0.00 0.00 2.24
3018 3121 6.782082 AAGAGAAGAGATGCATGTGTACTA 57.218 37.500 2.46 0.00 0.00 1.82
3019 3122 5.674052 AAGAGAAGAGATGCATGTGTACT 57.326 39.130 2.46 0.00 0.00 2.73
3020 3123 7.038659 AGTAAAGAGAAGAGATGCATGTGTAC 58.961 38.462 2.46 0.00 0.00 2.90
3021 3124 7.175347 AGTAAAGAGAAGAGATGCATGTGTA 57.825 36.000 2.46 0.00 0.00 2.90
3022 3125 6.047511 AGTAAAGAGAAGAGATGCATGTGT 57.952 37.500 2.46 0.00 0.00 3.72
3023 3126 6.981762 AAGTAAAGAGAAGAGATGCATGTG 57.018 37.500 2.46 0.00 0.00 3.21
3024 3127 9.678260 AATAAAGTAAAGAGAAGAGATGCATGT 57.322 29.630 2.46 0.00 0.00 3.21
3027 3130 9.950496 AAGAATAAAGTAAAGAGAAGAGATGCA 57.050 29.630 0.00 0.00 0.00 3.96
3059 3162 5.163395 GGAAAAGTGTGGTCCCATGTAAAAA 60.163 40.000 0.00 0.00 0.00 1.94
3060 3163 4.342665 GGAAAAGTGTGGTCCCATGTAAAA 59.657 41.667 0.00 0.00 0.00 1.52
3061 3164 3.892588 GGAAAAGTGTGGTCCCATGTAAA 59.107 43.478 0.00 0.00 0.00 2.01
3062 3165 3.492337 GGAAAAGTGTGGTCCCATGTAA 58.508 45.455 0.00 0.00 0.00 2.41
3063 3166 3.149005 GGAAAAGTGTGGTCCCATGTA 57.851 47.619 0.00 0.00 0.00 2.29
3064 3167 1.995376 GGAAAAGTGTGGTCCCATGT 58.005 50.000 0.00 0.00 0.00 3.21
3069 3172 1.328279 CTTGGGGAAAAGTGTGGTCC 58.672 55.000 0.00 0.00 0.00 4.46
3070 3173 0.673985 GCTTGGGGAAAAGTGTGGTC 59.326 55.000 0.00 0.00 0.00 4.02
3071 3174 0.032615 TGCTTGGGGAAAAGTGTGGT 60.033 50.000 0.00 0.00 0.00 4.16
3072 3175 0.389025 GTGCTTGGGGAAAAGTGTGG 59.611 55.000 0.00 0.00 0.00 4.17
3073 3176 0.389025 GGTGCTTGGGGAAAAGTGTG 59.611 55.000 0.00 0.00 0.00 3.82
3074 3177 0.759060 GGGTGCTTGGGGAAAAGTGT 60.759 55.000 0.00 0.00 0.00 3.55
3075 3178 1.805428 CGGGTGCTTGGGGAAAAGTG 61.805 60.000 0.00 0.00 0.00 3.16
3076 3179 1.530655 CGGGTGCTTGGGGAAAAGT 60.531 57.895 0.00 0.00 0.00 2.66
3077 3180 2.275380 CCGGGTGCTTGGGGAAAAG 61.275 63.158 0.00 0.00 0.00 2.27
3078 3181 2.203567 CCGGGTGCTTGGGGAAAA 60.204 61.111 0.00 0.00 0.00 2.29
3079 3182 4.986708 GCCGGGTGCTTGGGGAAA 62.987 66.667 2.18 0.00 36.87 3.13
3088 3191 2.124736 TCTGCAATAGCCGGGTGC 60.125 61.111 18.40 12.29 41.13 5.01
3089 3192 1.524621 CCTCTGCAATAGCCGGGTG 60.525 63.158 18.40 0.00 41.13 4.61
3090 3193 1.056700 ATCCTCTGCAATAGCCGGGT 61.057 55.000 12.58 12.58 41.13 5.28
3091 3194 0.321122 GATCCTCTGCAATAGCCGGG 60.321 60.000 2.18 0.00 41.13 5.73
3092 3195 0.321122 GGATCCTCTGCAATAGCCGG 60.321 60.000 3.84 0.00 41.13 6.13
3093 3196 0.321122 GGGATCCTCTGCAATAGCCG 60.321 60.000 12.58 0.00 41.13 5.52
3094 3197 0.767375 TGGGATCCTCTGCAATAGCC 59.233 55.000 12.58 0.00 41.13 3.93
3095 3198 1.419387 AGTGGGATCCTCTGCAATAGC 59.581 52.381 12.58 0.00 42.57 2.97
3096 3199 3.495806 GGAAGTGGGATCCTCTGCAATAG 60.496 52.174 12.58 0.00 33.98 1.73
3097 3200 2.439507 GGAAGTGGGATCCTCTGCAATA 59.560 50.000 12.58 0.00 33.98 1.90
3098 3201 1.213926 GGAAGTGGGATCCTCTGCAAT 59.786 52.381 12.58 0.00 33.98 3.56
3099 3202 0.620556 GGAAGTGGGATCCTCTGCAA 59.379 55.000 12.58 0.00 33.98 4.08
3100 3203 1.274703 GGGAAGTGGGATCCTCTGCA 61.275 60.000 12.58 0.00 37.14 4.41
3101 3204 1.529309 GGGAAGTGGGATCCTCTGC 59.471 63.158 12.58 9.12 37.14 4.26
3102 3205 0.621571 TGGGGAAGTGGGATCCTCTG 60.622 60.000 12.58 0.00 38.35 3.35
3103 3206 0.348370 ATGGGGAAGTGGGATCCTCT 59.652 55.000 12.58 7.91 38.35 3.69
3104 3207 0.767998 GATGGGGAAGTGGGATCCTC 59.232 60.000 12.58 5.55 37.99 3.71
3105 3208 0.046242 TGATGGGGAAGTGGGATCCT 59.954 55.000 12.58 0.00 37.14 3.24
3106 3209 1.152649 ATGATGGGGAAGTGGGATCC 58.847 55.000 1.92 1.92 36.16 3.36
3107 3210 3.498661 GGTTATGATGGGGAAGTGGGATC 60.499 52.174 0.00 0.00 0.00 3.36
3108 3211 2.447047 GGTTATGATGGGGAAGTGGGAT 59.553 50.000 0.00 0.00 0.00 3.85
3109 3212 1.850345 GGTTATGATGGGGAAGTGGGA 59.150 52.381 0.00 0.00 0.00 4.37
3110 3213 1.852965 AGGTTATGATGGGGAAGTGGG 59.147 52.381 0.00 0.00 0.00 4.61
3111 3214 5.324832 AATAGGTTATGATGGGGAAGTGG 57.675 43.478 0.00 0.00 0.00 4.00
3112 3215 6.605119 AGAAATAGGTTATGATGGGGAAGTG 58.395 40.000 0.00 0.00 0.00 3.16
3113 3216 6.183361 GGAGAAATAGGTTATGATGGGGAAGT 60.183 42.308 0.00 0.00 0.00 3.01
3114 3217 6.044871 AGGAGAAATAGGTTATGATGGGGAAG 59.955 42.308 0.00 0.00 0.00 3.46
3115 3218 5.917087 AGGAGAAATAGGTTATGATGGGGAA 59.083 40.000 0.00 0.00 0.00 3.97
3116 3219 5.310594 CAGGAGAAATAGGTTATGATGGGGA 59.689 44.000 0.00 0.00 0.00 4.81
3117 3220 5.310594 TCAGGAGAAATAGGTTATGATGGGG 59.689 44.000 0.00 0.00 0.00 4.96
3118 3221 6.043706 AGTCAGGAGAAATAGGTTATGATGGG 59.956 42.308 0.00 0.00 0.00 4.00
3119 3222 7.072263 AGTCAGGAGAAATAGGTTATGATGG 57.928 40.000 0.00 0.00 0.00 3.51
3120 3223 7.158021 GGAGTCAGGAGAAATAGGTTATGATG 58.842 42.308 0.00 0.00 0.00 3.07
3121 3224 6.015010 CGGAGTCAGGAGAAATAGGTTATGAT 60.015 42.308 0.00 0.00 0.00 2.45
3122 3225 5.302059 CGGAGTCAGGAGAAATAGGTTATGA 59.698 44.000 0.00 0.00 0.00 2.15
3123 3226 5.302059 TCGGAGTCAGGAGAAATAGGTTATG 59.698 44.000 0.00 0.00 0.00 1.90
3124 3227 5.455872 TCGGAGTCAGGAGAAATAGGTTAT 58.544 41.667 0.00 0.00 0.00 1.89
3125 3228 4.863548 TCGGAGTCAGGAGAAATAGGTTA 58.136 43.478 0.00 0.00 0.00 2.85
3126 3229 3.709587 TCGGAGTCAGGAGAAATAGGTT 58.290 45.455 0.00 0.00 0.00 3.50
3127 3230 3.383698 TCGGAGTCAGGAGAAATAGGT 57.616 47.619 0.00 0.00 0.00 3.08
3128 3231 3.257127 GGATCGGAGTCAGGAGAAATAGG 59.743 52.174 0.00 0.00 0.00 2.57
3129 3232 4.148838 AGGATCGGAGTCAGGAGAAATAG 58.851 47.826 0.00 0.00 0.00 1.73
3130 3233 4.186077 AGGATCGGAGTCAGGAGAAATA 57.814 45.455 0.00 0.00 0.00 1.40
3131 3234 3.039252 AGGATCGGAGTCAGGAGAAAT 57.961 47.619 0.00 0.00 0.00 2.17
3132 3235 2.534042 AGGATCGGAGTCAGGAGAAA 57.466 50.000 0.00 0.00 0.00 2.52
3133 3236 2.241430 TGTAGGATCGGAGTCAGGAGAA 59.759 50.000 0.00 0.00 0.00 2.87
3134 3237 1.844497 TGTAGGATCGGAGTCAGGAGA 59.156 52.381 0.00 0.00 0.00 3.71
3135 3238 2.350057 TGTAGGATCGGAGTCAGGAG 57.650 55.000 0.00 0.00 0.00 3.69
3136 3239 2.587522 CATGTAGGATCGGAGTCAGGA 58.412 52.381 0.00 0.00 0.00 3.86
3137 3240 1.615883 CCATGTAGGATCGGAGTCAGG 59.384 57.143 0.00 0.00 41.22 3.86
3138 3241 1.000283 GCCATGTAGGATCGGAGTCAG 60.000 57.143 0.00 0.00 41.22 3.51
3139 3242 1.040646 GCCATGTAGGATCGGAGTCA 58.959 55.000 0.00 0.00 41.22 3.41
3140 3243 1.040646 TGCCATGTAGGATCGGAGTC 58.959 55.000 0.00 0.00 41.22 3.36
3141 3244 1.345741 CATGCCATGTAGGATCGGAGT 59.654 52.381 0.00 0.00 41.22 3.85
3142 3245 1.345741 ACATGCCATGTAGGATCGGAG 59.654 52.381 8.96 0.00 42.78 4.63
3143 3246 1.070601 CACATGCCATGTAGGATCGGA 59.929 52.381 10.53 0.00 42.70 4.55
3144 3247 1.070601 TCACATGCCATGTAGGATCGG 59.929 52.381 10.53 0.00 42.70 4.18
3145 3248 2.410939 CTCACATGCCATGTAGGATCG 58.589 52.381 10.53 0.00 42.70 3.69
3146 3249 2.775890 CCTCACATGCCATGTAGGATC 58.224 52.381 19.99 0.00 42.70 3.36
3147 3250 1.202855 GCCTCACATGCCATGTAGGAT 60.203 52.381 25.01 0.00 42.70 3.24
3148 3251 0.181114 GCCTCACATGCCATGTAGGA 59.819 55.000 25.01 14.39 42.70 2.94
3149 3252 0.107066 TGCCTCACATGCCATGTAGG 60.107 55.000 20.19 20.19 42.70 3.18
3150 3253 1.878088 GATGCCTCACATGCCATGTAG 59.122 52.381 10.53 8.38 42.70 2.74
3151 3254 1.212441 TGATGCCTCACATGCCATGTA 59.788 47.619 10.53 0.00 42.70 2.29
3152 3255 0.033894 TGATGCCTCACATGCCATGT 60.034 50.000 4.03 4.03 46.22 3.21
3153 3256 2.801859 TGATGCCTCACATGCCATG 58.198 52.632 2.40 2.40 39.84 3.66
3162 3265 2.673200 GCCTCTGGGTGATGCCTCA 61.673 63.158 0.00 0.00 37.43 3.86
3163 3266 1.050988 TAGCCTCTGGGTGATGCCTC 61.051 60.000 0.00 0.00 37.07 4.70
3164 3267 0.401105 ATAGCCTCTGGGTGATGCCT 60.401 55.000 0.00 0.00 37.07 4.75
3165 3268 0.250640 CATAGCCTCTGGGTGATGCC 60.251 60.000 0.00 0.00 37.07 4.40
3166 3269 0.888285 GCATAGCCTCTGGGTGATGC 60.888 60.000 11.34 11.34 41.72 3.91
3167 3270 0.471191 TGCATAGCCTCTGGGTGATG 59.529 55.000 0.00 1.07 34.28 3.07
3168 3271 1.442773 ATGCATAGCCTCTGGGTGAT 58.557 50.000 0.00 0.00 34.28 3.06
3169 3272 1.134007 CAATGCATAGCCTCTGGGTGA 60.134 52.381 0.00 0.00 34.28 4.02
3170 3273 1.315690 CAATGCATAGCCTCTGGGTG 58.684 55.000 0.00 0.00 34.28 4.61
3171 3274 0.184451 CCAATGCATAGCCTCTGGGT 59.816 55.000 0.00 0.00 37.19 4.51
3172 3275 1.177256 GCCAATGCATAGCCTCTGGG 61.177 60.000 13.41 0.00 37.47 4.45
3173 3276 1.177256 GGCCAATGCATAGCCTCTGG 61.177 60.000 26.05 18.01 43.62 3.86
3174 3277 2.338381 GGCCAATGCATAGCCTCTG 58.662 57.895 26.05 9.63 43.62 3.35
3175 3278 4.916358 GGCCAATGCATAGCCTCT 57.084 55.556 26.05 0.00 43.62 3.69
3179 3282 2.731572 AGGATATGGCCAATGCATAGC 58.268 47.619 10.96 12.14 40.13 2.97
3180 3283 6.713903 CCTATTAGGATATGGCCAATGCATAG 59.286 42.308 10.96 12.81 37.67 2.23
3181 3284 6.160282 ACCTATTAGGATATGGCCAATGCATA 59.840 38.462 10.96 0.00 37.67 3.14
3182 3285 5.043881 ACCTATTAGGATATGGCCAATGCAT 60.044 40.000 10.96 1.40 37.67 3.96
3183 3286 4.292041 ACCTATTAGGATATGGCCAATGCA 59.708 41.667 10.96 0.00 37.67 3.96
3184 3287 4.860022 ACCTATTAGGATATGGCCAATGC 58.140 43.478 10.96 10.41 37.67 3.56
3185 3288 7.633789 ACTAACCTATTAGGATATGGCCAATG 58.366 38.462 10.96 0.00 41.98 2.82
3186 3289 7.830848 ACTAACCTATTAGGATATGGCCAAT 57.169 36.000 10.96 4.59 41.98 3.16
3187 3290 7.642094 AACTAACCTATTAGGATATGGCCAA 57.358 36.000 10.96 0.00 41.98 4.52
3188 3291 7.642094 AAACTAACCTATTAGGATATGGCCA 57.358 36.000 16.80 8.56 41.98 5.36
3189 3292 7.094334 GCAAAACTAACCTATTAGGATATGGCC 60.094 40.741 16.80 0.00 41.98 5.36
3190 3293 7.665974 AGCAAAACTAACCTATTAGGATATGGC 59.334 37.037 16.80 3.95 41.98 4.40
3191 3294 9.220767 GAGCAAAACTAACCTATTAGGATATGG 57.779 37.037 16.80 6.72 41.98 2.74
3194 3297 9.435570 AGAGAGCAAAACTAACCTATTAGGATA 57.564 33.333 16.80 8.05 41.98 2.59
3195 3298 8.207545 CAGAGAGCAAAACTAACCTATTAGGAT 58.792 37.037 16.80 7.24 41.98 3.24
3196 3299 7.399191 TCAGAGAGCAAAACTAACCTATTAGGA 59.601 37.037 16.80 0.00 41.98 2.94
3197 3300 7.556844 TCAGAGAGCAAAACTAACCTATTAGG 58.443 38.462 8.25 8.25 41.98 2.69
3198 3301 9.039870 CATCAGAGAGCAAAACTAACCTATTAG 57.960 37.037 0.00 0.00 43.14 1.73
3221 3324 5.121221 ACAACATCGAAAAAGGGAACATC 57.879 39.130 0.00 0.00 0.00 3.06
3229 3332 5.051508 CCAAAGCAGAACAACATCGAAAAAG 60.052 40.000 0.00 0.00 0.00 2.27
3230 3333 4.803088 CCAAAGCAGAACAACATCGAAAAA 59.197 37.500 0.00 0.00 0.00 1.94
3231 3334 4.142271 ACCAAAGCAGAACAACATCGAAAA 60.142 37.500 0.00 0.00 0.00 2.29
3232 3335 3.380004 ACCAAAGCAGAACAACATCGAAA 59.620 39.130 0.00 0.00 0.00 3.46
3233 3336 2.948979 ACCAAAGCAGAACAACATCGAA 59.051 40.909 0.00 0.00 0.00 3.71
3234 3337 2.290367 CACCAAAGCAGAACAACATCGA 59.710 45.455 0.00 0.00 0.00 3.59
3235 3338 2.033299 ACACCAAAGCAGAACAACATCG 59.967 45.455 0.00 0.00 0.00 3.84
3236 3339 3.374745 CACACCAAAGCAGAACAACATC 58.625 45.455 0.00 0.00 0.00 3.06
3237 3340 2.101249 CCACACCAAAGCAGAACAACAT 59.899 45.455 0.00 0.00 0.00 2.71
3238 3341 1.476085 CCACACCAAAGCAGAACAACA 59.524 47.619 0.00 0.00 0.00 3.33
3239 3342 1.476488 ACCACACCAAAGCAGAACAAC 59.524 47.619 0.00 0.00 0.00 3.32
3240 3343 1.476085 CACCACACCAAAGCAGAACAA 59.524 47.619 0.00 0.00 0.00 2.83
3241 3344 1.102154 CACCACACCAAAGCAGAACA 58.898 50.000 0.00 0.00 0.00 3.18
3242 3345 0.385390 CCACCACACCAAAGCAGAAC 59.615 55.000 0.00 0.00 0.00 3.01
3243 3346 0.033601 ACCACCACACCAAAGCAGAA 60.034 50.000 0.00 0.00 0.00 3.02
3244 3347 0.465460 GACCACCACACCAAAGCAGA 60.465 55.000 0.00 0.00 0.00 4.26
3245 3348 1.455383 GGACCACCACACCAAAGCAG 61.455 60.000 0.00 0.00 35.97 4.24
3246 3349 1.454847 GGACCACCACACCAAAGCA 60.455 57.895 0.00 0.00 35.97 3.91
3247 3350 2.200337 GGGACCACCACACCAAAGC 61.200 63.158 0.00 0.00 39.85 3.51
3248 3351 0.768622 TAGGGACCACCACACCAAAG 59.231 55.000 0.00 0.00 43.89 2.77
3249 3352 1.451449 ATAGGGACCACCACACCAAA 58.549 50.000 0.00 0.00 43.89 3.28
3250 3353 1.451449 AATAGGGACCACCACACCAA 58.549 50.000 0.00 0.00 43.89 3.67
3251 3354 1.451449 AAATAGGGACCACCACACCA 58.549 50.000 0.00 0.00 43.89 4.17
3252 3355 2.041216 AGAAAATAGGGACCACCACACC 59.959 50.000 0.00 0.00 43.89 4.16
3253 3356 3.009143 AGAGAAAATAGGGACCACCACAC 59.991 47.826 0.00 0.00 43.89 3.82
3254 3357 3.256704 AGAGAAAATAGGGACCACCACA 58.743 45.455 0.00 0.00 43.89 4.17
3255 3358 5.431179 TTAGAGAAAATAGGGACCACCAC 57.569 43.478 0.00 0.00 43.89 4.16
3256 3359 6.457159 TTTTAGAGAAAATAGGGACCACCA 57.543 37.500 0.00 0.00 33.73 4.17
3257 3360 9.642343 ATTATTTTAGAGAAAATAGGGACCACC 57.358 33.333 0.00 0.00 44.45 4.61
3319 3422 8.560374 GCAAAGTAGTAGACTCAAACTCATTTT 58.440 33.333 0.00 0.00 37.44 1.82
3320 3423 7.715249 TGCAAAGTAGTAGACTCAAACTCATTT 59.285 33.333 0.00 0.00 37.44 2.32
3321 3424 7.217200 TGCAAAGTAGTAGACTCAAACTCATT 58.783 34.615 0.00 0.00 37.44 2.57
3322 3425 6.759272 TGCAAAGTAGTAGACTCAAACTCAT 58.241 36.000 0.00 0.00 37.44 2.90
3323 3426 6.156748 TGCAAAGTAGTAGACTCAAACTCA 57.843 37.500 0.00 0.00 37.44 3.41
3324 3427 7.659652 ATTGCAAAGTAGTAGACTCAAACTC 57.340 36.000 1.71 0.00 37.44 3.01
3325 3428 8.451908 AAATTGCAAAGTAGTAGACTCAAACT 57.548 30.769 1.71 0.00 37.44 2.66
3326 3429 9.516314 AAAAATTGCAAAGTAGTAGACTCAAAC 57.484 29.630 1.71 0.00 37.44 2.93
3327 3430 9.515020 CAAAAATTGCAAAGTAGTAGACTCAAA 57.485 29.630 1.71 0.00 37.44 2.69
3328 3431 8.682710 ACAAAAATTGCAAAGTAGTAGACTCAA 58.317 29.630 1.71 0.00 37.44 3.02
3329 3432 8.220755 ACAAAAATTGCAAAGTAGTAGACTCA 57.779 30.769 1.71 0.00 37.44 3.41
3374 3477 9.313118 GGCAAAATAACCACTTATTTAAGGATG 57.687 33.333 2.63 0.00 40.31 3.51
3375 3478 8.194769 CGGCAAAATAACCACTTATTTAAGGAT 58.805 33.333 2.63 0.00 40.31 3.24
3376 3479 7.393796 TCGGCAAAATAACCACTTATTTAAGGA 59.606 33.333 2.63 0.00 40.31 3.36
3377 3480 7.540299 TCGGCAAAATAACCACTTATTTAAGG 58.460 34.615 2.63 0.00 40.31 2.69
3378 3481 8.856247 GTTCGGCAAAATAACCACTTATTTAAG 58.144 33.333 0.11 0.00 40.31 1.85
3379 3482 8.578151 AGTTCGGCAAAATAACCACTTATTTAA 58.422 29.630 0.11 0.00 40.31 1.52
3380 3483 8.024285 CAGTTCGGCAAAATAACCACTTATTTA 58.976 33.333 0.11 0.00 40.31 1.40
3381 3484 6.866248 CAGTTCGGCAAAATAACCACTTATTT 59.134 34.615 0.00 0.00 42.15 1.40
3382 3485 6.207810 TCAGTTCGGCAAAATAACCACTTATT 59.792 34.615 0.00 0.00 34.54 1.40
3383 3486 5.708230 TCAGTTCGGCAAAATAACCACTTAT 59.292 36.000 0.00 0.00 0.00 1.73
3384 3487 5.064558 TCAGTTCGGCAAAATAACCACTTA 58.935 37.500 0.00 0.00 0.00 2.24
3385 3488 3.886505 TCAGTTCGGCAAAATAACCACTT 59.113 39.130 0.00 0.00 0.00 3.16
3386 3489 3.482436 TCAGTTCGGCAAAATAACCACT 58.518 40.909 0.00 0.00 0.00 4.00
3387 3490 3.907894 TCAGTTCGGCAAAATAACCAC 57.092 42.857 0.00 0.00 0.00 4.16
3388 3491 4.920640 TTTCAGTTCGGCAAAATAACCA 57.079 36.364 0.00 0.00 0.00 3.67
3389 3492 5.923684 TGAATTTCAGTTCGGCAAAATAACC 59.076 36.000 0.00 0.00 0.00 2.85
3390 3493 7.401484 TTGAATTTCAGTTCGGCAAAATAAC 57.599 32.000 0.00 0.00 0.00 1.89
3391 3494 8.331742 GTTTTGAATTTCAGTTCGGCAAAATAA 58.668 29.630 0.00 0.00 36.53 1.40
3392 3495 7.708752 AGTTTTGAATTTCAGTTCGGCAAAATA 59.291 29.630 0.00 0.00 36.53 1.40
3393 3496 6.538381 AGTTTTGAATTTCAGTTCGGCAAAAT 59.462 30.769 0.00 0.00 36.53 1.82
3394 3497 5.872070 AGTTTTGAATTTCAGTTCGGCAAAA 59.128 32.000 0.00 0.00 33.11 2.44
3395 3498 5.415221 AGTTTTGAATTTCAGTTCGGCAAA 58.585 33.333 0.00 0.00 0.00 3.68
3396 3499 5.004922 AGTTTTGAATTTCAGTTCGGCAA 57.995 34.783 0.00 0.00 0.00 4.52
3397 3500 4.097135 TGAGTTTTGAATTTCAGTTCGGCA 59.903 37.500 0.00 0.00 0.00 5.69
3398 3501 4.606961 TGAGTTTTGAATTTCAGTTCGGC 58.393 39.130 0.00 0.00 0.00 5.54
3399 3502 6.144402 CCAATGAGTTTTGAATTTCAGTTCGG 59.856 38.462 0.00 0.00 0.00 4.30
3400 3503 6.697019 ACCAATGAGTTTTGAATTTCAGTTCG 59.303 34.615 0.00 0.00 0.00 3.95
3401 3504 7.042523 CCACCAATGAGTTTTGAATTTCAGTTC 60.043 37.037 0.00 0.00 0.00 3.01
3402 3505 6.762661 CCACCAATGAGTTTTGAATTTCAGTT 59.237 34.615 0.00 0.00 0.00 3.16
3403 3506 6.282930 CCACCAATGAGTTTTGAATTTCAGT 58.717 36.000 0.00 0.00 0.00 3.41
3404 3507 5.178067 GCCACCAATGAGTTTTGAATTTCAG 59.822 40.000 0.00 0.00 0.00 3.02
3405 3508 5.055812 GCCACCAATGAGTTTTGAATTTCA 58.944 37.500 0.00 0.00 0.00 2.69
3406 3509 5.055812 TGCCACCAATGAGTTTTGAATTTC 58.944 37.500 0.00 0.00 0.00 2.17
3407 3510 5.033589 TGCCACCAATGAGTTTTGAATTT 57.966 34.783 0.00 0.00 0.00 1.82
3408 3511 4.634199 CTGCCACCAATGAGTTTTGAATT 58.366 39.130 0.00 0.00 0.00 2.17
3409 3512 3.555586 GCTGCCACCAATGAGTTTTGAAT 60.556 43.478 0.00 0.00 0.00 2.57
3410 3513 2.224018 GCTGCCACCAATGAGTTTTGAA 60.224 45.455 0.00 0.00 0.00 2.69
3411 3514 1.340889 GCTGCCACCAATGAGTTTTGA 59.659 47.619 0.00 0.00 0.00 2.69
3412 3515 1.342174 AGCTGCCACCAATGAGTTTTG 59.658 47.619 0.00 0.00 0.00 2.44
3413 3516 1.342174 CAGCTGCCACCAATGAGTTTT 59.658 47.619 0.00 0.00 0.00 2.43
3414 3517 0.963962 CAGCTGCCACCAATGAGTTT 59.036 50.000 0.00 0.00 0.00 2.66
3415 3518 1.530013 GCAGCTGCCACCAATGAGTT 61.530 55.000 28.76 0.00 34.31 3.01
3416 3519 1.975407 GCAGCTGCCACCAATGAGT 60.975 57.895 28.76 0.00 34.31 3.41
3417 3520 1.677966 AGCAGCTGCCACCAATGAG 60.678 57.895 34.39 0.00 43.38 2.90
3418 3521 1.974875 CAGCAGCTGCCACCAATGA 60.975 57.895 34.39 0.00 43.38 2.57
3419 3522 1.529152 TTCAGCAGCTGCCACCAATG 61.529 55.000 34.39 24.01 43.38 2.82
3420 3523 0.828762 TTTCAGCAGCTGCCACCAAT 60.829 50.000 34.39 12.93 43.38 3.16
3421 3524 0.828762 ATTTCAGCAGCTGCCACCAA 60.829 50.000 34.39 21.61 43.38 3.67
3422 3525 0.038021 TATTTCAGCAGCTGCCACCA 59.962 50.000 34.39 17.33 43.38 4.17
3423 3526 0.453390 GTATTTCAGCAGCTGCCACC 59.547 55.000 34.39 12.18 43.38 4.61
3424 3527 1.457346 AGTATTTCAGCAGCTGCCAC 58.543 50.000 34.39 20.83 43.38 5.01
3425 3528 2.205022 AAGTATTTCAGCAGCTGCCA 57.795 45.000 34.39 19.42 43.38 4.92
3426 3529 4.907879 ATAAAGTATTTCAGCAGCTGCC 57.092 40.909 34.39 17.41 39.96 4.85
3427 3530 7.586714 AAAAATAAAGTATTTCAGCAGCTGC 57.413 32.000 31.53 31.53 40.09 5.25
3428 3531 9.846248 AGTAAAAATAAAGTATTTCAGCAGCTG 57.154 29.630 17.10 17.10 40.09 4.24
3454 3557 9.996554 TGTAGTTTTGAGACTATTTCAGATCAA 57.003 29.630 0.00 0.00 34.84 2.57
3455 3558 9.996554 TTGTAGTTTTGAGACTATTTCAGATCA 57.003 29.630 0.00 0.00 34.84 2.92
3458 3561 8.774586 GCTTTGTAGTTTTGAGACTATTTCAGA 58.225 33.333 0.00 0.00 34.84 3.27
3459 3562 8.559536 TGCTTTGTAGTTTTGAGACTATTTCAG 58.440 33.333 0.00 0.00 34.84 3.02
3460 3563 8.445275 TGCTTTGTAGTTTTGAGACTATTTCA 57.555 30.769 0.00 0.00 34.84 2.69
3461 3564 9.899226 ATTGCTTTGTAGTTTTGAGACTATTTC 57.101 29.630 0.00 0.00 34.84 2.17
3466 3569 8.903820 ACTTAATTGCTTTGTAGTTTTGAGACT 58.096 29.630 0.00 0.00 0.00 3.24
3467 3570 9.170584 GACTTAATTGCTTTGTAGTTTTGAGAC 57.829 33.333 0.00 0.00 0.00 3.36
3468 3571 8.349983 GGACTTAATTGCTTTGTAGTTTTGAGA 58.650 33.333 0.00 0.00 0.00 3.27
3480 3583 4.825085 TCGAACCTTGGACTTAATTGCTTT 59.175 37.500 0.00 0.00 0.00 3.51
3481 3584 4.215613 GTCGAACCTTGGACTTAATTGCTT 59.784 41.667 0.00 0.00 33.75 3.91
3482 3585 3.751698 GTCGAACCTTGGACTTAATTGCT 59.248 43.478 0.00 0.00 33.75 3.91
3483 3586 3.119955 GGTCGAACCTTGGACTTAATTGC 60.120 47.826 0.00 0.00 36.35 3.56
3484 3587 4.680171 GGTCGAACCTTGGACTTAATTG 57.320 45.455 0.00 0.00 36.35 2.32
3502 3636 4.689612 TGGGACTTTCTGCATATAGGTC 57.310 45.455 0.00 0.00 0.00 3.85
3504 3638 5.221803 ACAGATGGGACTTTCTGCATATAGG 60.222 44.000 0.00 0.00 40.94 2.57
3527 3661 1.363744 CGAAAGAGAGCACCATCCAC 58.636 55.000 0.00 0.00 0.00 4.02
3543 3677 9.643693 CCAAAAAGTATAGTTAAGTAGTCCGAA 57.356 33.333 0.00 0.00 0.00 4.30
3544 3678 9.023962 TCCAAAAAGTATAGTTAAGTAGTCCGA 57.976 33.333 0.00 0.00 0.00 4.55
3561 3695 6.721318 TGAGCCAATATAGTCTCCAAAAAGT 58.279 36.000 0.00 0.00 0.00 2.66
3584 3718 6.115446 TGTGCCCTTTATATCTGAGAAACTG 58.885 40.000 0.00 0.00 0.00 3.16
3691 3828 9.445786 ACAGAAATAAACTTGTACATGTTTTCG 57.554 29.630 32.31 23.06 38.84 3.46
3716 3853 4.152402 GCCGATATATGACCACATTCACAC 59.848 45.833 0.00 0.00 37.87 3.82
3719 3856 3.616317 CGGCCGATATATGACCACATTCA 60.616 47.826 24.07 0.00 37.87 2.57
3720 3857 2.930040 CGGCCGATATATGACCACATTC 59.070 50.000 24.07 0.00 37.87 2.67
3736 3873 3.869246 ACACTATGAAATAAAGACGGCCG 59.131 43.478 26.86 26.86 0.00 6.13


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.