Multiple sequence alignment - TraesCS3B01G493100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G493100 chr3B 100.000 3053 0 0 1 3053 738715910 738718962 0.000000e+00 5638
1 TraesCS3B01G493100 chr3B 76.355 1679 269 75 677 2287 617439627 617438009 0.000000e+00 784
2 TraesCS3B01G493100 chr3B 95.510 245 11 0 1 245 738707368 738707612 2.850000e-105 392
3 TraesCS3B01G493100 chr3B 95.102 245 12 0 1 245 250701401 250701645 1.330000e-103 387
4 TraesCS3B01G493100 chr3B 88.095 294 33 2 2758 3049 240343018 240342725 6.270000e-92 348
5 TraesCS3B01G493100 chr3B 88.316 291 32 2 2761 3049 536901300 536901010 6.270000e-92 348
6 TraesCS3B01G493100 chr3B 81.951 205 35 2 1025 1228 826919626 826919423 4.050000e-39 172
7 TraesCS3B01G493100 chr3D 93.985 2211 109 12 246 2437 555531349 555533554 0.000000e+00 3325
8 TraesCS3B01G493100 chr3D 83.041 342 25 9 2439 2751 555535921 555536258 2.320000e-71 279
9 TraesCS3B01G493100 chr3D 81.951 205 35 2 1025 1228 612263768 612263971 4.050000e-39 172
10 TraesCS3B01G493100 chr3A 92.912 1961 115 10 246 2187 692676870 692678825 0.000000e+00 2830
11 TraesCS3B01G493100 chr3A 92.411 448 23 8 2184 2620 692693836 692694283 2.000000e-176 628
12 TraesCS3B01G493100 chr3A 93.431 137 8 1 2625 2761 692694372 692694507 5.160000e-48 202
13 TraesCS3B01G493100 chr5A 79.335 1834 302 40 656 2445 6774559 6772759 0.000000e+00 1216
14 TraesCS3B01G493100 chr5A 88.316 291 32 2 2761 3049 139481495 139481205 6.270000e-92 348
15 TraesCS3B01G493100 chr5A 82.331 266 38 8 2184 2445 14854721 14854461 3.960000e-54 222
16 TraesCS3B01G493100 chr1B 95.219 251 12 0 1 251 283317953 283317703 6.130000e-107 398
17 TraesCS3B01G493100 chr5B 95.902 244 10 0 2 245 707118506 707118749 2.210000e-106 396
18 TraesCS3B01G493100 chr5B 95.510 245 11 0 1 245 278799796 278799552 2.850000e-105 392
19 TraesCS3B01G493100 chr5B 88.435 294 32 2 2758 3049 674376778 674376485 1.350000e-93 353
20 TraesCS3B01G493100 chr2B 95.528 246 11 0 1 246 521893780 521893535 7.930000e-106 394
21 TraesCS3B01G493100 chr6B 94.821 251 13 0 1 251 211200524 211200274 2.850000e-105 392
22 TraesCS3B01G493100 chr6B 88.435 294 32 2 2759 3050 551808489 551808782 1.350000e-93 353
23 TraesCS3B01G493100 chr6B 80.687 233 38 6 1001 1228 642989559 642989789 1.130000e-39 174
24 TraesCS3B01G493100 chr6B 80.687 233 38 6 1001 1228 643131464 643131694 1.130000e-39 174
25 TraesCS3B01G493100 chr7B 94.800 250 12 1 1 250 590471751 590471999 3.690000e-104 388
26 TraesCS3B01G493100 chr7B 95.102 245 12 0 1 245 590464938 590465182 1.330000e-103 387
27 TraesCS3B01G493100 chr4A 88.396 293 32 2 2759 3049 166997397 166997105 4.840000e-93 351
28 TraesCS3B01G493100 chr1A 87.973 291 33 2 2761 3049 42226162 42225872 2.910000e-90 342
29 TraesCS3B01G493100 chr7A 87.500 296 35 2 2760 3053 223684589 223684294 1.050000e-89 340
30 TraesCS3B01G493100 chr2A 88.153 287 32 2 2762 3046 256202145 256202431 1.050000e-89 340
31 TraesCS3B01G493100 chr6D 80.687 233 38 6 1001 1228 427170924 427171154 1.130000e-39 174
32 TraesCS3B01G493100 chr6A 82.039 206 33 4 1025 1228 571881450 571881653 4.050000e-39 172


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G493100 chr3B 738715910 738718962 3052 False 5638 5638 100.000 1 3053 1 chr3B.!!$F3 3052
1 TraesCS3B01G493100 chr3B 617438009 617439627 1618 True 784 784 76.355 677 2287 1 chr3B.!!$R3 1610
2 TraesCS3B01G493100 chr3D 555531349 555536258 4909 False 1802 3325 88.513 246 2751 2 chr3D.!!$F2 2505
3 TraesCS3B01G493100 chr3A 692676870 692678825 1955 False 2830 2830 92.912 246 2187 1 chr3A.!!$F1 1941
4 TraesCS3B01G493100 chr3A 692693836 692694507 671 False 415 628 92.921 2184 2761 2 chr3A.!!$F2 577
5 TraesCS3B01G493100 chr5A 6772759 6774559 1800 True 1216 1216 79.335 656 2445 1 chr5A.!!$R1 1789

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
133 134 0.025001 CTTGTAACGCTTCCGCATCG 59.975 55.0 0.0 0.0 38.22 3.84 F
171 172 0.033601 AGATGCACTCCCGTCTCTCT 60.034 55.0 0.0 0.0 0.00 3.10 F
179 180 0.035725 TCCCGTCTCTCTCGTTGCTA 60.036 55.0 0.0 0.0 0.00 3.49 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1999 2079 0.465097 TCGGACTCGGTATGGGTCTC 60.465 60.0 0.00 0.00 36.95 3.36 R
2003 2083 1.453762 GGACTCGGACTCGGTATGGG 61.454 65.0 0.00 0.00 36.95 4.00 R
2133 2227 2.695666 CACCCAGGTAGATCGATCAAGT 59.304 50.0 26.47 9.41 0.00 3.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.148279 GGGAGACGTCATCGGGCT 61.148 66.667 19.50 0.00 41.85 5.19
18 19 2.105128 GGAGACGTCATCGGGCTG 59.895 66.667 19.50 0.00 41.85 4.85
19 20 2.583593 GAGACGTCATCGGGCTGC 60.584 66.667 19.50 0.00 41.85 5.25
20 21 3.356639 GAGACGTCATCGGGCTGCA 62.357 63.158 19.50 0.00 41.85 4.41
21 22 3.188786 GACGTCATCGGGCTGCAC 61.189 66.667 11.55 0.00 41.85 4.57
24 25 3.490759 GTCATCGGGCTGCACGTG 61.491 66.667 24.84 20.19 0.00 4.49
25 26 4.002506 TCATCGGGCTGCACGTGT 62.003 61.111 24.84 11.59 0.00 4.49
26 27 3.792047 CATCGGGCTGCACGTGTG 61.792 66.667 24.84 19.32 0.00 3.82
27 28 4.314440 ATCGGGCTGCACGTGTGT 62.314 61.111 24.84 6.32 0.00 3.72
28 29 3.825160 ATCGGGCTGCACGTGTGTT 62.825 57.895 24.84 2.53 0.00 3.32
29 30 4.312231 CGGGCTGCACGTGTGTTG 62.312 66.667 17.53 6.17 0.00 3.33
30 31 2.899838 GGGCTGCACGTGTGTTGA 60.900 61.111 18.38 0.00 0.00 3.18
31 32 2.477176 GGGCTGCACGTGTGTTGAA 61.477 57.895 18.38 0.00 0.00 2.69
32 33 1.298339 GGCTGCACGTGTGTTGAAC 60.298 57.895 18.38 0.00 0.00 3.18
33 34 1.651132 GCTGCACGTGTGTTGAACG 60.651 57.895 18.38 0.00 46.32 3.95
34 35 1.011242 CTGCACGTGTGTTGAACGG 60.011 57.895 18.38 0.00 45.20 4.44
36 37 3.018973 CACGTGTGTTGAACGGGG 58.981 61.111 7.58 0.00 45.20 5.73
37 38 1.521906 CACGTGTGTTGAACGGGGA 60.522 57.895 7.58 0.00 45.20 4.81
38 39 1.227438 ACGTGTGTTGAACGGGGAG 60.227 57.895 0.00 0.00 45.20 4.30
39 40 1.959226 CGTGTGTTGAACGGGGAGG 60.959 63.158 0.00 0.00 37.39 4.30
40 41 2.112297 TGTGTTGAACGGGGAGGC 59.888 61.111 0.00 0.00 0.00 4.70
41 42 3.047877 GTGTTGAACGGGGAGGCG 61.048 66.667 0.00 0.00 0.00 5.52
53 54 3.774702 GAGGCGCCGTTGTTCGAC 61.775 66.667 23.20 1.50 42.86 4.20
57 58 3.698463 CGCCGTTGTTCGACGCTT 61.698 61.111 7.03 0.00 38.64 4.68
58 59 2.366584 CGCCGTTGTTCGACGCTTA 61.367 57.895 7.03 0.00 38.64 3.09
59 60 1.414897 GCCGTTGTTCGACGCTTAG 59.585 57.895 7.03 0.00 41.50 2.18
60 61 1.005294 GCCGTTGTTCGACGCTTAGA 61.005 55.000 7.03 0.00 41.50 2.10
61 62 1.625616 CCGTTGTTCGACGCTTAGAT 58.374 50.000 7.03 0.00 41.50 1.98
62 63 1.582502 CCGTTGTTCGACGCTTAGATC 59.417 52.381 7.03 0.00 41.50 2.75
63 64 1.249491 CGTTGTTCGACGCTTAGATCG 59.751 52.381 0.00 0.73 42.86 3.69
64 65 1.582502 GTTGTTCGACGCTTAGATCGG 59.417 52.381 6.51 0.00 38.86 4.18
65 66 1.089112 TGTTCGACGCTTAGATCGGA 58.911 50.000 6.51 0.00 38.86 4.55
66 67 1.469703 TGTTCGACGCTTAGATCGGAA 59.530 47.619 6.51 0.00 38.86 4.30
67 68 2.098607 TGTTCGACGCTTAGATCGGAAT 59.901 45.455 6.51 0.00 38.86 3.01
68 69 2.682952 TCGACGCTTAGATCGGAATC 57.317 50.000 6.51 0.00 38.86 2.52
69 70 1.944709 TCGACGCTTAGATCGGAATCA 59.055 47.619 6.51 0.00 38.86 2.57
70 71 2.356695 TCGACGCTTAGATCGGAATCAA 59.643 45.455 6.51 0.00 38.86 2.57
71 72 2.468040 CGACGCTTAGATCGGAATCAAC 59.532 50.000 0.00 0.00 34.67 3.18
72 73 2.795470 GACGCTTAGATCGGAATCAACC 59.205 50.000 0.00 0.00 34.07 3.77
79 80 4.420143 CGGAATCAACCGCGATCT 57.580 55.556 8.23 0.00 46.20 2.75
80 81 1.927210 CGGAATCAACCGCGATCTG 59.073 57.895 8.23 0.97 46.20 2.90
81 82 0.527600 CGGAATCAACCGCGATCTGA 60.528 55.000 8.23 7.51 46.20 3.27
82 83 1.651987 GGAATCAACCGCGATCTGAA 58.348 50.000 8.23 0.00 0.00 3.02
83 84 2.213499 GGAATCAACCGCGATCTGAAT 58.787 47.619 8.23 0.00 0.00 2.57
84 85 2.614057 GGAATCAACCGCGATCTGAATT 59.386 45.455 8.23 0.00 0.00 2.17
85 86 3.546815 GGAATCAACCGCGATCTGAATTG 60.547 47.826 8.23 0.35 0.00 2.32
86 87 0.726827 TCAACCGCGATCTGAATTGC 59.273 50.000 8.23 0.00 38.71 3.56
87 88 0.729116 CAACCGCGATCTGAATTGCT 59.271 50.000 8.23 0.00 39.76 3.91
88 89 1.933181 CAACCGCGATCTGAATTGCTA 59.067 47.619 8.23 0.00 39.76 3.49
89 90 1.571919 ACCGCGATCTGAATTGCTAC 58.428 50.000 8.23 0.00 39.76 3.58
90 91 0.504384 CCGCGATCTGAATTGCTACG 59.496 55.000 8.23 0.00 39.76 3.51
91 92 1.477105 CGCGATCTGAATTGCTACGA 58.523 50.000 0.00 0.00 39.76 3.43
92 93 1.449789 CGCGATCTGAATTGCTACGAG 59.550 52.381 0.00 0.00 39.76 4.18
93 94 2.464865 GCGATCTGAATTGCTACGAGT 58.535 47.619 0.00 0.00 38.97 4.18
94 95 3.629058 GCGATCTGAATTGCTACGAGTA 58.371 45.455 0.00 0.00 38.97 2.59
95 96 3.422546 GCGATCTGAATTGCTACGAGTAC 59.577 47.826 0.00 0.00 38.97 2.73
96 97 3.659899 CGATCTGAATTGCTACGAGTACG 59.340 47.826 0.00 0.00 45.75 3.67
97 98 4.552184 CGATCTGAATTGCTACGAGTACGA 60.552 45.833 0.00 0.00 42.66 3.43
98 99 4.012319 TCTGAATTGCTACGAGTACGAC 57.988 45.455 0.00 0.00 42.66 4.34
99 100 3.688185 TCTGAATTGCTACGAGTACGACT 59.312 43.478 0.00 0.00 42.66 4.18
100 101 4.012319 TGAATTGCTACGAGTACGACTC 57.988 45.455 0.00 0.00 41.71 3.36
101 102 3.181503 TGAATTGCTACGAGTACGACTCC 60.182 47.826 8.73 0.00 42.12 3.85
102 103 2.105006 TTGCTACGAGTACGACTCCT 57.895 50.000 8.73 2.19 42.12 3.69
103 104 2.105006 TGCTACGAGTACGACTCCTT 57.895 50.000 8.73 1.29 42.12 3.36
104 105 2.005451 TGCTACGAGTACGACTCCTTC 58.995 52.381 8.73 0.00 42.12 3.46
105 106 2.005451 GCTACGAGTACGACTCCTTCA 58.995 52.381 8.73 0.00 42.12 3.02
106 107 2.613133 GCTACGAGTACGACTCCTTCAT 59.387 50.000 8.73 0.00 42.12 2.57
107 108 3.303263 GCTACGAGTACGACTCCTTCATC 60.303 52.174 8.73 0.00 42.12 2.92
108 109 2.015587 ACGAGTACGACTCCTTCATCC 58.984 52.381 8.73 0.00 42.12 3.51
109 110 1.003759 CGAGTACGACTCCTTCATCCG 60.004 57.143 8.73 0.00 42.12 4.18
110 111 0.739561 AGTACGACTCCTTCATCCGC 59.260 55.000 0.00 0.00 0.00 5.54
111 112 0.591741 GTACGACTCCTTCATCCGCG 60.592 60.000 0.00 0.00 0.00 6.46
112 113 1.028330 TACGACTCCTTCATCCGCGT 61.028 55.000 4.92 0.00 0.00 6.01
113 114 1.153823 CGACTCCTTCATCCGCGTT 60.154 57.895 4.92 0.00 0.00 4.84
114 115 1.140407 CGACTCCTTCATCCGCGTTC 61.140 60.000 4.92 0.00 0.00 3.95
115 116 0.173708 GACTCCTTCATCCGCGTTCT 59.826 55.000 4.92 0.00 0.00 3.01
116 117 0.608640 ACTCCTTCATCCGCGTTCTT 59.391 50.000 4.92 0.00 0.00 2.52
117 118 1.002366 CTCCTTCATCCGCGTTCTTG 58.998 55.000 4.92 0.00 0.00 3.02
118 119 0.320374 TCCTTCATCCGCGTTCTTGT 59.680 50.000 4.92 0.00 0.00 3.16
119 120 1.546923 TCCTTCATCCGCGTTCTTGTA 59.453 47.619 4.92 0.00 0.00 2.41
120 121 2.028839 TCCTTCATCCGCGTTCTTGTAA 60.029 45.455 4.92 0.00 0.00 2.41
121 122 2.093783 CCTTCATCCGCGTTCTTGTAAC 59.906 50.000 4.92 0.00 0.00 2.50
122 123 1.342555 TCATCCGCGTTCTTGTAACG 58.657 50.000 4.92 5.94 45.56 3.18
128 129 3.921081 CGTTCTTGTAACGCTTCCG 57.079 52.632 0.00 0.00 36.82 4.30
129 130 0.179258 CGTTCTTGTAACGCTTCCGC 60.179 55.000 0.00 0.00 36.82 5.54
130 131 0.863144 GTTCTTGTAACGCTTCCGCA 59.137 50.000 0.00 0.00 38.22 5.69
131 132 1.463444 GTTCTTGTAACGCTTCCGCAT 59.537 47.619 0.00 0.00 38.22 4.73
132 133 1.355971 TCTTGTAACGCTTCCGCATC 58.644 50.000 0.00 0.00 38.22 3.91
133 134 0.025001 CTTGTAACGCTTCCGCATCG 59.975 55.000 0.00 0.00 38.22 3.84
134 135 0.668096 TTGTAACGCTTCCGCATCGT 60.668 50.000 0.00 0.00 38.22 3.73
135 136 1.343821 GTAACGCTTCCGCATCGTG 59.656 57.895 0.00 0.00 38.22 4.35
136 137 1.074319 GTAACGCTTCCGCATCGTGA 61.074 55.000 0.00 0.00 38.22 4.35
137 138 0.179121 TAACGCTTCCGCATCGTGAT 60.179 50.000 0.00 0.00 38.22 3.06
138 139 1.421410 AACGCTTCCGCATCGTGATC 61.421 55.000 0.00 0.00 38.22 2.92
139 140 1.589993 CGCTTCCGCATCGTGATCT 60.590 57.895 0.00 0.00 35.30 2.75
140 141 1.148157 CGCTTCCGCATCGTGATCTT 61.148 55.000 0.00 0.00 35.30 2.40
141 142 0.579156 GCTTCCGCATCGTGATCTTC 59.421 55.000 0.00 0.00 35.78 2.87
142 143 1.926561 CTTCCGCATCGTGATCTTCA 58.073 50.000 0.00 0.00 0.00 3.02
143 144 2.270923 CTTCCGCATCGTGATCTTCAA 58.729 47.619 0.00 0.00 0.00 2.69
144 145 1.926561 TCCGCATCGTGATCTTCAAG 58.073 50.000 0.00 0.00 0.00 3.02
145 146 0.933097 CCGCATCGTGATCTTCAAGG 59.067 55.000 0.00 0.00 0.00 3.61
146 147 0.933097 CGCATCGTGATCTTCAAGGG 59.067 55.000 0.00 0.00 0.00 3.95
147 148 1.740380 CGCATCGTGATCTTCAAGGGT 60.740 52.381 0.00 0.00 0.00 4.34
148 149 2.481276 CGCATCGTGATCTTCAAGGGTA 60.481 50.000 0.00 0.00 0.00 3.69
149 150 2.866762 GCATCGTGATCTTCAAGGGTAC 59.133 50.000 0.00 0.00 0.00 3.34
150 151 2.933495 TCGTGATCTTCAAGGGTACG 57.067 50.000 0.00 0.00 0.00 3.67
151 152 2.439409 TCGTGATCTTCAAGGGTACGA 58.561 47.619 6.78 6.78 36.83 3.43
152 153 2.821378 TCGTGATCTTCAAGGGTACGAA 59.179 45.455 7.99 0.00 36.33 3.85
153 154 3.119602 TCGTGATCTTCAAGGGTACGAAG 60.120 47.826 7.99 2.76 40.02 3.79
157 158 3.247006 TCTTCAAGGGTACGAAGATGC 57.753 47.619 6.79 0.00 42.01 3.91
158 159 2.565391 TCTTCAAGGGTACGAAGATGCA 59.435 45.455 6.79 0.00 42.01 3.96
159 160 2.380084 TCAAGGGTACGAAGATGCAC 57.620 50.000 0.00 0.00 0.00 4.57
160 161 1.899814 TCAAGGGTACGAAGATGCACT 59.100 47.619 0.00 0.00 0.00 4.40
161 162 2.094182 TCAAGGGTACGAAGATGCACTC 60.094 50.000 0.00 0.00 0.00 3.51
162 163 0.824759 AGGGTACGAAGATGCACTCC 59.175 55.000 0.00 0.00 0.00 3.85
163 164 0.179081 GGGTACGAAGATGCACTCCC 60.179 60.000 0.00 0.00 0.00 4.30
164 165 0.527817 GGTACGAAGATGCACTCCCG 60.528 60.000 0.00 0.00 0.00 5.14
165 166 0.172803 GTACGAAGATGCACTCCCGT 59.827 55.000 10.17 10.17 39.61 5.28
166 167 0.454600 TACGAAGATGCACTCCCGTC 59.545 55.000 8.89 0.00 38.24 4.79
167 168 1.251527 ACGAAGATGCACTCCCGTCT 61.252 55.000 0.00 0.00 34.53 4.18
168 169 0.526524 CGAAGATGCACTCCCGTCTC 60.527 60.000 0.00 0.00 30.95 3.36
169 170 0.820871 GAAGATGCACTCCCGTCTCT 59.179 55.000 0.00 0.00 30.95 3.10
170 171 0.820871 AAGATGCACTCCCGTCTCTC 59.179 55.000 0.00 0.00 30.95 3.20
171 172 0.033601 AGATGCACTCCCGTCTCTCT 60.034 55.000 0.00 0.00 0.00 3.10
172 173 0.383949 GATGCACTCCCGTCTCTCTC 59.616 60.000 0.00 0.00 0.00 3.20
173 174 1.380403 ATGCACTCCCGTCTCTCTCG 61.380 60.000 0.00 0.00 0.00 4.04
174 175 2.041686 GCACTCCCGTCTCTCTCGT 61.042 63.158 0.00 0.00 0.00 4.18
175 176 1.587933 GCACTCCCGTCTCTCTCGTT 61.588 60.000 0.00 0.00 0.00 3.85
176 177 0.169230 CACTCCCGTCTCTCTCGTTG 59.831 60.000 0.00 0.00 0.00 4.10
177 178 1.137825 CTCCCGTCTCTCTCGTTGC 59.862 63.158 0.00 0.00 0.00 4.17
178 179 1.303398 TCCCGTCTCTCTCGTTGCT 60.303 57.895 0.00 0.00 0.00 3.91
179 180 0.035725 TCCCGTCTCTCTCGTTGCTA 60.036 55.000 0.00 0.00 0.00 3.49
180 181 0.378962 CCCGTCTCTCTCGTTGCTAG 59.621 60.000 0.00 0.00 0.00 3.42
181 182 1.088306 CCGTCTCTCTCGTTGCTAGT 58.912 55.000 0.00 0.00 0.00 2.57
182 183 2.277969 CCGTCTCTCTCGTTGCTAGTA 58.722 52.381 0.00 0.00 0.00 1.82
183 184 2.873472 CCGTCTCTCTCGTTGCTAGTAT 59.127 50.000 0.00 0.00 0.00 2.12
184 185 3.059461 CCGTCTCTCTCGTTGCTAGTATC 60.059 52.174 0.00 0.00 0.00 2.24
185 186 3.805422 CGTCTCTCTCGTTGCTAGTATCT 59.195 47.826 0.00 0.00 0.00 1.98
186 187 4.271533 CGTCTCTCTCGTTGCTAGTATCTT 59.728 45.833 0.00 0.00 0.00 2.40
187 188 5.557514 CGTCTCTCTCGTTGCTAGTATCTTC 60.558 48.000 0.00 0.00 0.00 2.87
188 189 5.294799 GTCTCTCTCGTTGCTAGTATCTTCA 59.705 44.000 0.00 0.00 0.00 3.02
189 190 6.017440 GTCTCTCTCGTTGCTAGTATCTTCAT 60.017 42.308 0.00 0.00 0.00 2.57
190 191 7.171848 GTCTCTCTCGTTGCTAGTATCTTCATA 59.828 40.741 0.00 0.00 0.00 2.15
191 192 7.386573 TCTCTCTCGTTGCTAGTATCTTCATAG 59.613 40.741 0.00 0.00 0.00 2.23
192 193 7.217906 TCTCTCGTTGCTAGTATCTTCATAGA 58.782 38.462 0.00 0.00 34.21 1.98
193 194 7.880713 TCTCTCGTTGCTAGTATCTTCATAGAT 59.119 37.037 0.00 0.00 43.51 1.98
194 195 8.397575 TCTCGTTGCTAGTATCTTCATAGATT 57.602 34.615 0.00 0.00 41.38 2.40
195 196 8.293157 TCTCGTTGCTAGTATCTTCATAGATTG 58.707 37.037 0.00 0.00 41.38 2.67
196 197 8.166422 TCGTTGCTAGTATCTTCATAGATTGA 57.834 34.615 0.00 0.00 41.38 2.57
197 198 8.797438 TCGTTGCTAGTATCTTCATAGATTGAT 58.203 33.333 0.00 0.00 41.38 2.57
198 199 9.071221 CGTTGCTAGTATCTTCATAGATTGATC 57.929 37.037 0.00 0.00 41.38 2.92
202 203 9.585099 GCTAGTATCTTCATAGATTGATCTTGG 57.415 37.037 0.00 0.00 41.38 3.61
205 206 9.152327 AGTATCTTCATAGATTGATCTTGGTGA 57.848 33.333 0.00 0.24 41.38 4.02
206 207 9.941325 GTATCTTCATAGATTGATCTTGGTGAT 57.059 33.333 0.00 7.46 41.38 3.06
207 208 8.850007 ATCTTCATAGATTGATCTTGGTGATG 57.150 34.615 0.00 5.11 37.90 3.07
208 209 6.709397 TCTTCATAGATTGATCTTGGTGATGC 59.291 38.462 0.00 0.00 38.32 3.91
209 210 4.992951 TCATAGATTGATCTTGGTGATGCG 59.007 41.667 0.00 0.00 38.32 4.73
210 211 3.272574 AGATTGATCTTGGTGATGCGT 57.727 42.857 0.00 0.00 35.14 5.24
211 212 4.406648 AGATTGATCTTGGTGATGCGTA 57.593 40.909 0.00 0.00 35.14 4.42
212 213 4.375272 AGATTGATCTTGGTGATGCGTAG 58.625 43.478 0.00 0.00 35.14 3.51
213 214 3.885724 TTGATCTTGGTGATGCGTAGA 57.114 42.857 0.00 0.00 35.14 2.59
214 215 3.885724 TGATCTTGGTGATGCGTAGAA 57.114 42.857 0.00 0.00 35.14 2.10
215 216 4.200838 TGATCTTGGTGATGCGTAGAAA 57.799 40.909 0.00 0.00 35.14 2.52
216 217 4.574892 TGATCTTGGTGATGCGTAGAAAA 58.425 39.130 0.00 0.00 35.14 2.29
217 218 5.185454 TGATCTTGGTGATGCGTAGAAAAT 58.815 37.500 0.00 0.00 35.14 1.82
218 219 5.647658 TGATCTTGGTGATGCGTAGAAAATT 59.352 36.000 0.00 0.00 35.14 1.82
219 220 5.957842 TCTTGGTGATGCGTAGAAAATTT 57.042 34.783 0.00 0.00 0.00 1.82
220 221 6.325919 TCTTGGTGATGCGTAGAAAATTTT 57.674 33.333 2.28 2.28 0.00 1.82
221 222 7.441890 TCTTGGTGATGCGTAGAAAATTTTA 57.558 32.000 2.75 0.00 0.00 1.52
222 223 7.877003 TCTTGGTGATGCGTAGAAAATTTTAA 58.123 30.769 2.75 0.00 0.00 1.52
223 224 8.353684 TCTTGGTGATGCGTAGAAAATTTTAAA 58.646 29.630 2.75 0.00 0.00 1.52
224 225 9.139174 CTTGGTGATGCGTAGAAAATTTTAAAT 57.861 29.630 2.75 0.00 0.00 1.40
225 226 9.482627 TTGGTGATGCGTAGAAAATTTTAAATT 57.517 25.926 2.75 0.00 0.00 1.82
226 227 9.482627 TGGTGATGCGTAGAAAATTTTAAATTT 57.517 25.926 9.58 9.58 0.00 1.82
227 228 9.952341 GGTGATGCGTAGAAAATTTTAAATTTC 57.048 29.630 14.90 9.37 36.11 2.17
230 231 9.675553 GATGCGTAGAAAATTTTAAATTTCTGC 57.324 29.630 19.95 18.09 43.67 4.26
231 232 8.810652 TGCGTAGAAAATTTTAAATTTCTGCT 57.189 26.923 19.95 14.04 43.67 4.24
232 233 9.900710 TGCGTAGAAAATTTTAAATTTCTGCTA 57.099 25.926 19.95 13.27 43.67 3.49
239 240 8.528917 AAATTTTAAATTTCTGCTACGTTCCC 57.471 30.769 9.58 0.00 0.00 3.97
240 241 5.632244 TTTAAATTTCTGCTACGTTCCCC 57.368 39.130 0.00 0.00 0.00 4.81
241 242 2.871096 AATTTCTGCTACGTTCCCCA 57.129 45.000 0.00 0.00 0.00 4.96
242 243 2.871096 ATTTCTGCTACGTTCCCCAA 57.129 45.000 0.00 0.00 0.00 4.12
243 244 1.886886 TTTCTGCTACGTTCCCCAAC 58.113 50.000 0.00 0.00 0.00 3.77
244 245 0.759959 TTCTGCTACGTTCCCCAACA 59.240 50.000 0.00 0.00 32.14 3.33
285 286 4.585879 TCAATAAAAGGAGTTTCCGAGGG 58.414 43.478 0.00 0.00 42.75 4.30
407 408 2.764010 TCGAGATCCAATCCGAGGAAAA 59.236 45.455 0.00 0.00 38.93 2.29
452 457 1.843376 CCCCTCCACACACTCACCT 60.843 63.158 0.00 0.00 0.00 4.00
456 461 1.349026 CCTCCACACACTCACCTTCAT 59.651 52.381 0.00 0.00 0.00 2.57
472 477 4.691860 CTTCATGAAGGAATTGAGCGTT 57.308 40.909 25.14 0.00 34.87 4.84
474 479 4.685169 TCATGAAGGAATTGAGCGTTTC 57.315 40.909 0.00 0.00 0.00 2.78
478 483 2.457366 AGGAATTGAGCGTTTCTCGT 57.543 45.000 0.00 0.00 44.86 4.18
479 484 3.587797 AGGAATTGAGCGTTTCTCGTA 57.412 42.857 0.00 0.00 44.86 3.43
643 648 1.529010 GGCCAACATCGATTCGTTTCG 60.529 52.381 5.89 3.85 40.46 3.46
652 657 7.515957 ACATCGATTCGTTTCGTACTAAAAT 57.484 32.000 5.89 0.00 40.03 1.82
739 748 6.701400 GCGGAATGAAACATAGCCATAAAAAT 59.299 34.615 0.00 0.00 0.00 1.82
824 833 7.289317 TGGACAGAGAATACCGAATAATACCTT 59.711 37.037 0.00 0.00 0.00 3.50
890 900 2.416747 CAGTCAAGCGTTCCTCAATCA 58.583 47.619 0.00 0.00 0.00 2.57
905 915 6.618501 TCCTCAATCATCATCCTCTTCTCTA 58.381 40.000 0.00 0.00 0.00 2.43
949 974 1.324718 CCGAGACGTAGACAAACACG 58.675 55.000 0.00 0.00 43.63 4.49
965 992 3.367646 ACACGAATCTACCTCCTCTCA 57.632 47.619 0.00 0.00 0.00 3.27
993 1042 2.032528 CCTGAGCCAGCCAACGAA 59.967 61.111 0.00 0.00 0.00 3.85
994 1043 2.037136 CCTGAGCCAGCCAACGAAG 61.037 63.158 0.00 0.00 0.00 3.79
1004 1053 1.244019 GCCAACGAAGGAGCAATGGT 61.244 55.000 0.00 0.00 0.00 3.55
1006 1055 1.238439 CAACGAAGGAGCAATGGTGT 58.762 50.000 0.00 0.00 0.00 4.16
1334 1387 2.224769 TGTTGCTAAAGGAGGTGAAGGG 60.225 50.000 0.00 0.00 0.00 3.95
1347 1400 1.600916 GAAGGGGCGCAAAGAGTGT 60.601 57.895 10.83 0.00 0.00 3.55
1432 1485 0.398522 ACTATGCGACATGGGGGAGA 60.399 55.000 0.00 0.00 0.00 3.71
1566 1628 1.966451 GCTGCCGCTACAACCACTT 60.966 57.895 0.00 0.00 0.00 3.16
1571 1633 1.504359 CCGCTACAACCACTTTTCGA 58.496 50.000 0.00 0.00 0.00 3.71
1957 2037 3.711059 GAGATGGTGCAGCAGGGGG 62.711 68.421 24.45 0.00 0.00 5.40
1982 2062 1.644786 CCGAACATGGGCTTTCCGTC 61.645 60.000 0.00 0.00 38.76 4.79
1984 2064 1.644786 GAACATGGGCTTTCCGTCCG 61.645 60.000 0.00 0.00 41.63 4.79
2003 2083 1.385528 GGAGGAGAAGGAGACGAGAC 58.614 60.000 0.00 0.00 0.00 3.36
2068 2161 4.522405 CCGAGTGAGACTATCCATTGATCT 59.478 45.833 0.00 0.00 32.18 2.75
2114 2208 5.985530 CGATCTATTAGTTCATTGCCACTCA 59.014 40.000 0.00 0.00 0.00 3.41
2133 2227 9.419297 GCCACTCAAGTTATATTATTCATCGTA 57.581 33.333 0.00 0.00 0.00 3.43
2165 2268 1.620822 ACCTGGGTGCAAGATTTGTC 58.379 50.000 0.00 0.00 0.00 3.18
2218 2323 1.138859 TCTTCATATCGGTGGCACCAG 59.861 52.381 34.11 25.62 38.47 4.00
2219 2324 1.138859 CTTCATATCGGTGGCACCAGA 59.861 52.381 34.11 29.33 38.47 3.86
2272 2380 5.308825 CCTTTTCTTTGGTTCTCTCTGCTA 58.691 41.667 0.00 0.00 0.00 3.49
2322 2430 3.254060 AGTCGTGAATCTTGACCATTCG 58.746 45.455 2.69 0.00 33.57 3.34
2358 2467 9.211485 CAATTTATATCCCCGTCGTACTTAAAT 57.789 33.333 0.00 0.00 0.00 1.40
2476 4955 1.439679 GACCAGAAAACTAGGTGCGG 58.560 55.000 0.00 0.00 35.36 5.69
2542 5027 2.920724 TAGCTGCCTGTGTTGTGTTA 57.079 45.000 0.00 0.00 0.00 2.41
2591 5078 9.435688 TTGAGGAAAAAGAAAAGAAAGAAAAGG 57.564 29.630 0.00 0.00 0.00 3.11
2593 5080 9.823647 GAGGAAAAAGAAAAGAAAGAAAAGGAT 57.176 29.630 0.00 0.00 0.00 3.24
2611 5098 1.064654 GATGGAGAATGTCAAAGCGGC 59.935 52.381 0.00 0.00 0.00 6.53
2620 5107 0.955428 GTCAAAGCGGCTGATGGACA 60.955 55.000 1.81 0.00 0.00 4.02
2751 5322 9.543018 GTTCTTAATCCTTGTCTAATGAAAACG 57.457 33.333 0.00 0.00 0.00 3.60
2753 5324 4.600012 ATCCTTGTCTAATGAAAACGCG 57.400 40.909 3.53 3.53 0.00 6.01
2761 5332 0.040425 AATGAAAACGCGTGGAGTGC 60.040 50.000 14.98 0.00 0.00 4.40
2768 5339 4.255126 GCGTGGAGTGCGAACTAA 57.745 55.556 0.00 0.00 0.00 2.24
2769 5340 1.779683 GCGTGGAGTGCGAACTAAC 59.220 57.895 0.00 0.00 0.00 2.34
2770 5341 1.623973 GCGTGGAGTGCGAACTAACC 61.624 60.000 0.00 0.00 0.00 2.85
2771 5342 0.038526 CGTGGAGTGCGAACTAACCT 60.039 55.000 0.00 0.00 0.00 3.50
2772 5343 1.429463 GTGGAGTGCGAACTAACCTG 58.571 55.000 0.00 0.00 0.00 4.00
2773 5344 1.045407 TGGAGTGCGAACTAACCTGT 58.955 50.000 0.00 0.00 0.00 4.00
2774 5345 1.270094 TGGAGTGCGAACTAACCTGTG 60.270 52.381 0.00 0.00 0.00 3.66
2775 5346 1.429463 GAGTGCGAACTAACCTGTGG 58.571 55.000 0.00 0.00 0.00 4.17
2776 5347 0.756903 AGTGCGAACTAACCTGTGGT 59.243 50.000 0.00 0.00 37.65 4.16
2778 5349 1.263217 GTGCGAACTAACCTGTGGTTG 59.737 52.381 11.78 5.16 46.35 3.77
2779 5350 0.237498 GCGAACTAACCTGTGGTTGC 59.763 55.000 11.78 3.11 46.35 4.17
2780 5351 1.588674 CGAACTAACCTGTGGTTGCA 58.411 50.000 11.78 0.00 46.35 4.08
2781 5352 2.151202 CGAACTAACCTGTGGTTGCAT 58.849 47.619 11.78 0.00 46.35 3.96
2782 5353 2.095768 CGAACTAACCTGTGGTTGCATG 60.096 50.000 11.78 0.00 46.35 4.06
2783 5354 2.949177 ACTAACCTGTGGTTGCATGA 57.051 45.000 11.78 0.00 46.35 3.07
2784 5355 3.439857 ACTAACCTGTGGTTGCATGAT 57.560 42.857 11.78 0.00 46.35 2.45
2785 5356 3.766545 ACTAACCTGTGGTTGCATGATT 58.233 40.909 11.78 0.00 46.35 2.57
2786 5357 4.917385 ACTAACCTGTGGTTGCATGATTA 58.083 39.130 11.78 0.00 46.35 1.75
2787 5358 4.943705 ACTAACCTGTGGTTGCATGATTAG 59.056 41.667 11.78 1.99 46.35 1.73
2788 5359 3.719268 ACCTGTGGTTGCATGATTAGA 57.281 42.857 0.00 0.00 27.29 2.10
2789 5360 3.614092 ACCTGTGGTTGCATGATTAGAG 58.386 45.455 0.00 0.00 27.29 2.43
2790 5361 2.947652 CCTGTGGTTGCATGATTAGAGG 59.052 50.000 0.00 0.00 0.00 3.69
2791 5362 2.947652 CTGTGGTTGCATGATTAGAGGG 59.052 50.000 0.00 0.00 0.00 4.30
2792 5363 2.575735 TGTGGTTGCATGATTAGAGGGA 59.424 45.455 0.00 0.00 0.00 4.20
2793 5364 2.945668 GTGGTTGCATGATTAGAGGGAC 59.054 50.000 0.00 0.00 0.00 4.46
2794 5365 2.575735 TGGTTGCATGATTAGAGGGACA 59.424 45.455 0.00 0.00 0.00 4.02
2795 5366 3.209410 GGTTGCATGATTAGAGGGACAG 58.791 50.000 0.00 0.00 0.00 3.51
2796 5367 3.370953 GGTTGCATGATTAGAGGGACAGT 60.371 47.826 0.00 0.00 0.00 3.55
2797 5368 3.548745 TGCATGATTAGAGGGACAGTG 57.451 47.619 0.00 0.00 0.00 3.66
2798 5369 2.171237 TGCATGATTAGAGGGACAGTGG 59.829 50.000 0.00 0.00 0.00 4.00
2799 5370 2.171448 GCATGATTAGAGGGACAGTGGT 59.829 50.000 0.00 0.00 0.00 4.16
2800 5371 3.388024 GCATGATTAGAGGGACAGTGGTA 59.612 47.826 0.00 0.00 0.00 3.25
2801 5372 4.040952 GCATGATTAGAGGGACAGTGGTAT 59.959 45.833 0.00 0.00 0.00 2.73
2802 5373 5.788450 CATGATTAGAGGGACAGTGGTATC 58.212 45.833 0.00 0.00 0.00 2.24
2803 5374 4.223953 TGATTAGAGGGACAGTGGTATCC 58.776 47.826 0.00 0.00 0.00 2.59
2813 5384 3.844063 TGGTATCCCCAACCCACC 58.156 61.111 0.00 0.00 41.50 4.61
2814 5385 1.151565 TGGTATCCCCAACCCACCA 60.152 57.895 0.00 0.00 41.50 4.17
2815 5386 1.211567 TGGTATCCCCAACCCACCAG 61.212 60.000 0.00 0.00 41.50 4.00
2816 5387 0.917333 GGTATCCCCAACCCACCAGA 60.917 60.000 0.00 0.00 0.00 3.86
2817 5388 1.222567 GTATCCCCAACCCACCAGAT 58.777 55.000 0.00 0.00 0.00 2.90
2818 5389 1.569072 GTATCCCCAACCCACCAGATT 59.431 52.381 0.00 0.00 0.00 2.40
2819 5390 1.092549 ATCCCCAACCCACCAGATTT 58.907 50.000 0.00 0.00 0.00 2.17
2820 5391 1.761711 TCCCCAACCCACCAGATTTA 58.238 50.000 0.00 0.00 0.00 1.40
2821 5392 2.074579 TCCCCAACCCACCAGATTTAA 58.925 47.619 0.00 0.00 0.00 1.52
2822 5393 2.042433 TCCCCAACCCACCAGATTTAAG 59.958 50.000 0.00 0.00 0.00 1.85
2823 5394 2.225267 CCCCAACCCACCAGATTTAAGT 60.225 50.000 0.00 0.00 0.00 2.24
2824 5395 3.089284 CCCAACCCACCAGATTTAAGTC 58.911 50.000 0.00 0.00 0.00 3.01
2825 5396 3.089284 CCAACCCACCAGATTTAAGTCC 58.911 50.000 0.00 0.00 0.00 3.85
2826 5397 3.245264 CCAACCCACCAGATTTAAGTCCT 60.245 47.826 0.00 0.00 0.00 3.85
2827 5398 3.721087 ACCCACCAGATTTAAGTCCTG 57.279 47.619 0.00 0.00 0.00 3.86
2834 5405 3.684788 CCAGATTTAAGTCCTGGTGTTCG 59.315 47.826 0.00 0.00 41.81 3.95
2835 5406 3.125316 CAGATTTAAGTCCTGGTGTTCGC 59.875 47.826 0.00 0.00 0.00 4.70
2836 5407 2.623878 TTTAAGTCCTGGTGTTCGCA 57.376 45.000 0.00 0.00 0.00 5.10
2837 5408 2.851263 TTAAGTCCTGGTGTTCGCAT 57.149 45.000 0.00 0.00 0.00 4.73
2838 5409 3.965379 TTAAGTCCTGGTGTTCGCATA 57.035 42.857 0.00 0.00 0.00 3.14
2839 5410 2.851263 AAGTCCTGGTGTTCGCATAA 57.149 45.000 0.00 0.00 0.00 1.90
2840 5411 3.350219 AAGTCCTGGTGTTCGCATAAT 57.650 42.857 0.00 0.00 0.00 1.28
2841 5412 3.350219 AGTCCTGGTGTTCGCATAATT 57.650 42.857 0.00 0.00 0.00 1.40
2842 5413 3.270877 AGTCCTGGTGTTCGCATAATTC 58.729 45.455 0.00 0.00 0.00 2.17
2843 5414 2.354821 GTCCTGGTGTTCGCATAATTCC 59.645 50.000 0.00 0.00 0.00 3.01
2844 5415 2.238646 TCCTGGTGTTCGCATAATTCCT 59.761 45.455 0.00 0.00 0.00 3.36
2845 5416 2.355756 CCTGGTGTTCGCATAATTCCTG 59.644 50.000 0.00 0.00 0.00 3.86
2846 5417 2.355756 CTGGTGTTCGCATAATTCCTGG 59.644 50.000 0.00 0.00 0.00 4.45
2847 5418 2.026729 TGGTGTTCGCATAATTCCTGGA 60.027 45.455 0.00 0.00 0.00 3.86
2848 5419 3.214328 GGTGTTCGCATAATTCCTGGAT 58.786 45.455 0.00 0.00 0.00 3.41
2849 5420 3.632145 GGTGTTCGCATAATTCCTGGATT 59.368 43.478 0.00 0.00 0.00 3.01
2850 5421 4.097892 GGTGTTCGCATAATTCCTGGATTT 59.902 41.667 8.70 8.70 0.00 2.17
2851 5422 5.298276 GGTGTTCGCATAATTCCTGGATTTA 59.702 40.000 12.10 12.10 0.00 1.40
2852 5423 6.016276 GGTGTTCGCATAATTCCTGGATTTAT 60.016 38.462 14.93 14.93 0.00 1.40
2853 5424 7.425606 GTGTTCGCATAATTCCTGGATTTATT 58.574 34.615 17.11 8.68 0.00 1.40
2854 5425 7.920682 GTGTTCGCATAATTCCTGGATTTATTT 59.079 33.333 17.11 1.31 0.00 1.40
2855 5426 8.134895 TGTTCGCATAATTCCTGGATTTATTTC 58.865 33.333 17.11 12.40 0.00 2.17
2856 5427 7.815840 TCGCATAATTCCTGGATTTATTTCA 57.184 32.000 17.11 5.45 0.00 2.69
2857 5428 7.874940 TCGCATAATTCCTGGATTTATTTCAG 58.125 34.615 17.11 9.96 0.00 3.02
2858 5429 7.040478 TCGCATAATTCCTGGATTTATTTCAGG 60.040 37.037 17.11 9.69 46.91 3.86
2866 5437 6.992063 CTGGATTTATTTCAGGATATCCGG 57.008 41.667 16.21 15.67 42.08 5.14
2867 5438 5.253330 TGGATTTATTTCAGGATATCCGGC 58.747 41.667 16.36 0.83 42.08 6.13
2868 5439 4.332819 GGATTTATTTCAGGATATCCGGCG 59.667 45.833 16.36 9.39 42.08 6.46
2869 5440 4.610605 TTTATTTCAGGATATCCGGCGA 57.389 40.909 16.36 11.47 42.08 5.54
2870 5441 4.819105 TTATTTCAGGATATCCGGCGAT 57.181 40.909 16.36 13.83 42.08 4.58
2871 5442 2.455674 TTTCAGGATATCCGGCGATG 57.544 50.000 16.36 9.05 42.08 3.84
2872 5443 0.037326 TTCAGGATATCCGGCGATGC 60.037 55.000 16.36 0.00 42.08 3.91
2873 5444 1.184970 TCAGGATATCCGGCGATGCA 61.185 55.000 16.36 0.00 42.08 3.96
2874 5445 1.016130 CAGGATATCCGGCGATGCAC 61.016 60.000 16.21 0.00 42.08 4.57
2875 5446 1.188219 AGGATATCCGGCGATGCACT 61.188 55.000 16.21 0.00 42.08 4.40
2876 5447 0.320771 GGATATCCGGCGATGCACTT 60.321 55.000 9.30 0.00 0.00 3.16
2877 5448 1.512926 GATATCCGGCGATGCACTTT 58.487 50.000 9.30 0.00 0.00 2.66
2878 5449 1.461127 GATATCCGGCGATGCACTTTC 59.539 52.381 9.30 0.00 0.00 2.62
2879 5450 0.176910 TATCCGGCGATGCACTTTCA 59.823 50.000 9.30 0.00 0.00 2.69
2880 5451 1.091771 ATCCGGCGATGCACTTTCAG 61.092 55.000 9.30 0.00 0.00 3.02
2881 5452 2.034879 CCGGCGATGCACTTTCAGT 61.035 57.895 9.30 0.00 0.00 3.41
2883 5454 1.503542 GGCGATGCACTTTCAGTGG 59.496 57.895 6.05 0.00 46.01 4.00
2884 5455 1.503542 GCGATGCACTTTCAGTGGG 59.496 57.895 6.05 0.00 46.01 4.61
2885 5456 0.955428 GCGATGCACTTTCAGTGGGA 60.955 55.000 6.05 0.00 46.01 4.37
2886 5457 1.081892 CGATGCACTTTCAGTGGGAG 58.918 55.000 6.05 0.00 46.01 4.30
2887 5458 1.457346 GATGCACTTTCAGTGGGAGG 58.543 55.000 6.05 0.00 46.01 4.30
2888 5459 1.003580 GATGCACTTTCAGTGGGAGGA 59.996 52.381 6.05 0.00 46.01 3.71
2889 5460 0.397941 TGCACTTTCAGTGGGAGGAG 59.602 55.000 6.05 0.00 46.01 3.69
2890 5461 0.687354 GCACTTTCAGTGGGAGGAGA 59.313 55.000 6.05 0.00 46.01 3.71
2891 5462 1.280421 GCACTTTCAGTGGGAGGAGAT 59.720 52.381 6.05 0.00 46.01 2.75
2892 5463 2.938756 GCACTTTCAGTGGGAGGAGATG 60.939 54.545 6.05 0.00 46.01 2.90
2893 5464 2.304180 CACTTTCAGTGGGAGGAGATGT 59.696 50.000 0.00 0.00 42.35 3.06
2894 5465 2.982488 ACTTTCAGTGGGAGGAGATGTT 59.018 45.455 0.00 0.00 0.00 2.71
2895 5466 3.008485 ACTTTCAGTGGGAGGAGATGTTC 59.992 47.826 0.00 0.00 0.00 3.18
2903 5474 4.808649 GGAGATGTTCCCGTCGAC 57.191 61.111 5.18 5.18 40.37 4.20
2904 5475 1.226603 GGAGATGTTCCCGTCGACG 60.227 63.158 30.33 30.33 40.37 5.12
2905 5476 1.651240 GGAGATGTTCCCGTCGACGA 61.651 60.000 37.65 18.99 40.37 4.20
2906 5477 0.522915 GAGATGTTCCCGTCGACGAC 60.523 60.000 37.65 27.09 43.02 4.34
2939 5510 4.451629 GGTGACTCCGTAAATCTCAAGA 57.548 45.455 0.00 0.00 0.00 3.02
2940 5511 5.012328 GGTGACTCCGTAAATCTCAAGAT 57.988 43.478 0.00 0.00 36.07 2.40
2941 5512 4.806247 GGTGACTCCGTAAATCTCAAGATG 59.194 45.833 0.00 0.00 34.49 2.90
2942 5513 5.394224 GGTGACTCCGTAAATCTCAAGATGA 60.394 44.000 0.00 0.00 34.49 2.92
2943 5514 6.276847 GTGACTCCGTAAATCTCAAGATGAT 58.723 40.000 0.00 0.00 34.49 2.45
2944 5515 7.426410 GTGACTCCGTAAATCTCAAGATGATA 58.574 38.462 0.00 0.00 34.49 2.15
2945 5516 8.085296 GTGACTCCGTAAATCTCAAGATGATAT 58.915 37.037 0.00 0.00 34.49 1.63
2946 5517 8.084684 TGACTCCGTAAATCTCAAGATGATATG 58.915 37.037 0.00 0.00 34.49 1.78
2947 5518 7.957002 ACTCCGTAAATCTCAAGATGATATGT 58.043 34.615 0.00 0.00 34.49 2.29
2948 5519 8.085296 ACTCCGTAAATCTCAAGATGATATGTC 58.915 37.037 0.00 0.00 34.49 3.06
2949 5520 8.183104 TCCGTAAATCTCAAGATGATATGTCT 57.817 34.615 0.00 0.00 34.49 3.41
2950 5521 8.084684 TCCGTAAATCTCAAGATGATATGTCTG 58.915 37.037 0.00 0.00 34.49 3.51
2951 5522 7.148672 CCGTAAATCTCAAGATGATATGTCTGC 60.149 40.741 0.00 0.00 34.49 4.26
2952 5523 7.598118 CGTAAATCTCAAGATGATATGTCTGCT 59.402 37.037 0.00 0.00 34.49 4.24
2953 5524 7.966246 AAATCTCAAGATGATATGTCTGCTC 57.034 36.000 0.00 0.00 34.49 4.26
2954 5525 5.118642 TCTCAAGATGATATGTCTGCTCG 57.881 43.478 0.00 0.00 0.00 5.03
2955 5526 4.022503 TCTCAAGATGATATGTCTGCTCGG 60.023 45.833 0.00 0.00 0.00 4.63
2956 5527 3.638627 TCAAGATGATATGTCTGCTCGGT 59.361 43.478 0.00 0.00 0.00 4.69
2957 5528 3.932545 AGATGATATGTCTGCTCGGTC 57.067 47.619 0.00 0.00 0.00 4.79
2958 5529 3.495331 AGATGATATGTCTGCTCGGTCT 58.505 45.455 0.00 0.00 0.00 3.85
2959 5530 3.505680 AGATGATATGTCTGCTCGGTCTC 59.494 47.826 0.00 0.00 0.00 3.36
2960 5531 2.937519 TGATATGTCTGCTCGGTCTCT 58.062 47.619 0.00 0.00 0.00 3.10
2961 5532 2.881513 TGATATGTCTGCTCGGTCTCTC 59.118 50.000 0.00 0.00 0.00 3.20
2962 5533 2.420058 TATGTCTGCTCGGTCTCTCA 57.580 50.000 0.00 0.00 0.00 3.27
2963 5534 1.102154 ATGTCTGCTCGGTCTCTCAG 58.898 55.000 0.00 0.00 0.00 3.35
2964 5535 0.036875 TGTCTGCTCGGTCTCTCAGA 59.963 55.000 0.00 0.00 33.64 3.27
2965 5536 1.340502 TGTCTGCTCGGTCTCTCAGAT 60.341 52.381 0.00 0.00 37.81 2.90
2966 5537 1.065401 GTCTGCTCGGTCTCTCAGATG 59.935 57.143 0.00 0.00 37.81 2.90
2967 5538 1.102154 CTGCTCGGTCTCTCAGATGT 58.898 55.000 0.00 0.00 0.00 3.06
2968 5539 0.813821 TGCTCGGTCTCTCAGATGTG 59.186 55.000 0.00 0.00 0.00 3.21
2969 5540 0.527385 GCTCGGTCTCTCAGATGTGC 60.527 60.000 0.00 0.00 0.00 4.57
2970 5541 1.102154 CTCGGTCTCTCAGATGTGCT 58.898 55.000 0.00 0.00 0.00 4.40
2971 5542 1.065401 CTCGGTCTCTCAGATGTGCTC 59.935 57.143 0.00 0.00 0.00 4.26
2972 5543 0.813821 CGGTCTCTCAGATGTGCTCA 59.186 55.000 0.00 0.00 0.00 4.26
2973 5544 1.408340 CGGTCTCTCAGATGTGCTCAT 59.592 52.381 0.00 0.00 36.95 2.90
2974 5545 2.620585 CGGTCTCTCAGATGTGCTCATA 59.379 50.000 0.32 0.00 34.06 2.15
2975 5546 3.304592 CGGTCTCTCAGATGTGCTCATAG 60.305 52.174 0.32 0.00 34.06 2.23
2976 5547 3.636300 GGTCTCTCAGATGTGCTCATAGT 59.364 47.826 0.32 0.00 34.06 2.12
2977 5548 4.499526 GGTCTCTCAGATGTGCTCATAGTG 60.500 50.000 0.32 3.06 34.06 2.74
2978 5549 3.635836 TCTCTCAGATGTGCTCATAGTGG 59.364 47.826 0.32 0.00 34.06 4.00
2979 5550 3.369175 TCTCAGATGTGCTCATAGTGGT 58.631 45.455 0.32 0.00 34.06 4.16
2980 5551 4.536765 TCTCAGATGTGCTCATAGTGGTA 58.463 43.478 0.32 0.00 34.06 3.25
2981 5552 4.582240 TCTCAGATGTGCTCATAGTGGTAG 59.418 45.833 0.32 0.00 34.06 3.18
2982 5553 3.638627 TCAGATGTGCTCATAGTGGTAGG 59.361 47.826 0.32 0.00 34.06 3.18
2983 5554 2.968574 AGATGTGCTCATAGTGGTAGGG 59.031 50.000 0.32 0.00 34.06 3.53
2984 5555 2.247699 TGTGCTCATAGTGGTAGGGT 57.752 50.000 0.00 0.00 0.00 4.34
2985 5556 1.831106 TGTGCTCATAGTGGTAGGGTG 59.169 52.381 0.00 0.00 0.00 4.61
2986 5557 1.831736 GTGCTCATAGTGGTAGGGTGT 59.168 52.381 0.00 0.00 0.00 4.16
2987 5558 1.831106 TGCTCATAGTGGTAGGGTGTG 59.169 52.381 0.00 0.00 0.00 3.82
2988 5559 1.473434 GCTCATAGTGGTAGGGTGTGC 60.473 57.143 0.00 0.00 0.00 4.57
2989 5560 0.821517 TCATAGTGGTAGGGTGTGCG 59.178 55.000 0.00 0.00 0.00 5.34
2990 5561 0.535335 CATAGTGGTAGGGTGTGCGT 59.465 55.000 0.00 0.00 0.00 5.24
2991 5562 0.535335 ATAGTGGTAGGGTGTGCGTG 59.465 55.000 0.00 0.00 0.00 5.34
2992 5563 0.828762 TAGTGGTAGGGTGTGCGTGT 60.829 55.000 0.00 0.00 0.00 4.49
2993 5564 0.828762 AGTGGTAGGGTGTGCGTGTA 60.829 55.000 0.00 0.00 0.00 2.90
2994 5565 0.248289 GTGGTAGGGTGTGCGTGTAT 59.752 55.000 0.00 0.00 0.00 2.29
2995 5566 0.248012 TGGTAGGGTGTGCGTGTATG 59.752 55.000 0.00 0.00 0.00 2.39
2996 5567 1.087771 GGTAGGGTGTGCGTGTATGC 61.088 60.000 0.00 0.00 0.00 3.14
2997 5568 0.390603 GTAGGGTGTGCGTGTATGCA 60.391 55.000 0.00 0.00 43.95 3.96
3009 5580 5.750650 TGCGTGTATGCATTCATAAAGATG 58.249 37.500 3.54 0.00 40.62 2.90
3010 5581 5.526846 TGCGTGTATGCATTCATAAAGATGA 59.473 36.000 3.54 0.00 40.62 2.92
3011 5582 6.075918 GCGTGTATGCATTCATAAAGATGAG 58.924 40.000 3.54 0.00 37.85 2.90
3012 5583 6.293081 GCGTGTATGCATTCATAAAGATGAGT 60.293 38.462 3.54 0.00 37.85 3.41
3014 5585 7.254556 CGTGTATGCATTCATAAAGATGAGTGT 60.255 37.037 3.54 0.00 46.40 3.55
3015 5586 9.045223 GTGTATGCATTCATAAAGATGAGTGTA 57.955 33.333 3.54 7.66 46.40 2.90
3018 5589 6.962686 TGCATTCATAAAGATGAGTGTATGC 58.037 36.000 12.30 12.30 46.40 3.14
3019 5590 6.075918 GCATTCATAAAGATGAGTGTATGCG 58.924 40.000 10.81 0.00 46.40 4.73
3020 5591 5.657470 TTCATAAAGATGAGTGTATGCGC 57.343 39.130 0.00 0.00 43.03 6.09
3021 5592 4.692228 TCATAAAGATGAGTGTATGCGCA 58.308 39.130 14.96 14.96 37.15 6.09
3022 5593 5.299949 TCATAAAGATGAGTGTATGCGCAT 58.700 37.500 28.23 28.23 37.15 4.73
3023 5594 6.454795 TCATAAAGATGAGTGTATGCGCATA 58.545 36.000 25.78 25.78 37.15 3.14
3024 5595 7.099120 TCATAAAGATGAGTGTATGCGCATAT 58.901 34.615 31.14 17.07 37.15 1.78
3025 5596 8.250332 TCATAAAGATGAGTGTATGCGCATATA 58.750 33.333 31.14 26.17 37.15 0.86
3026 5597 9.038803 CATAAAGATGAGTGTATGCGCATATAT 57.961 33.333 31.14 20.05 34.73 0.86
3029 5600 8.585189 AAGATGAGTGTATGCGCATATATATG 57.415 34.615 31.14 17.01 36.78 1.78
3030 5601 7.945134 AGATGAGTGTATGCGCATATATATGA 58.055 34.615 31.14 16.52 35.75 2.15
3031 5602 8.416329 AGATGAGTGTATGCGCATATATATGAA 58.584 33.333 31.14 15.06 35.75 2.57
3032 5603 7.755582 TGAGTGTATGCGCATATATATGAAC 57.244 36.000 31.14 19.26 35.75 3.18
3033 5604 6.472163 TGAGTGTATGCGCATATATATGAACG 59.528 38.462 31.14 18.88 35.75 3.95
3034 5605 5.232202 AGTGTATGCGCATATATATGAACGC 59.768 40.000 31.14 27.17 41.93 4.84
3035 5606 5.232202 GTGTATGCGCATATATATGAACGCT 59.768 40.000 31.14 22.93 42.02 5.07
3036 5607 5.810074 TGTATGCGCATATATATGAACGCTT 59.190 36.000 31.14 27.67 42.02 4.68
3037 5608 4.582441 TGCGCATATATATGAACGCTTG 57.418 40.909 30.46 13.75 42.02 4.01
3038 5609 3.181521 TGCGCATATATATGAACGCTTGC 60.182 43.478 30.46 19.75 42.02 4.01
3039 5610 3.587323 CGCATATATATGAACGCTTGCG 58.413 45.455 24.06 15.78 44.39 4.85
3040 5611 3.060761 CGCATATATATGAACGCTTGCGT 59.939 43.478 24.06 15.19 44.64 5.24
3041 5612 4.569029 GCATATATATGAACGCTTGCGTC 58.431 43.478 24.06 14.17 35.75 5.19
3042 5613 4.327357 GCATATATATGAACGCTTGCGTCT 59.673 41.667 24.06 11.16 35.75 4.18
3043 5614 5.722321 GCATATATATGAACGCTTGCGTCTG 60.722 44.000 24.06 8.54 35.75 3.51
3044 5615 2.010145 ATATGAACGCTTGCGTCTGT 57.990 45.000 20.87 11.69 0.00 3.41
3045 5616 2.640346 TATGAACGCTTGCGTCTGTA 57.360 45.000 20.87 10.79 0.00 2.74
3046 5617 2.010145 ATGAACGCTTGCGTCTGTAT 57.990 45.000 20.87 5.03 0.00 2.29
3047 5618 1.790755 TGAACGCTTGCGTCTGTATT 58.209 45.000 20.87 4.26 0.00 1.89
3048 5619 1.459209 TGAACGCTTGCGTCTGTATTG 59.541 47.619 20.87 0.00 0.00 1.90
3049 5620 1.459592 GAACGCTTGCGTCTGTATTGT 59.540 47.619 20.87 2.73 0.00 2.71
3050 5621 0.790207 ACGCTTGCGTCTGTATTGTG 59.210 50.000 15.19 0.00 0.00 3.33
3051 5622 0.790207 CGCTTGCGTCTGTATTGTGT 59.210 50.000 6.86 0.00 0.00 3.72
3052 5623 1.194547 CGCTTGCGTCTGTATTGTGTT 59.805 47.619 6.86 0.00 0.00 3.32
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.148279 AGCCCGATGACGTCTCCC 61.148 66.667 17.92 4.81 37.88 4.30
1 2 2.105128 CAGCCCGATGACGTCTCC 59.895 66.667 17.92 7.37 37.88 3.71
2 3 2.583593 GCAGCCCGATGACGTCTC 60.584 66.667 17.92 10.63 37.88 3.36
3 4 3.381983 TGCAGCCCGATGACGTCT 61.382 61.111 17.92 1.84 37.88 4.18
7 8 3.490759 CACGTGCAGCCCGATGAC 61.491 66.667 3.59 0.00 0.00 3.06
8 9 4.002506 ACACGTGCAGCCCGATGA 62.003 61.111 17.22 0.00 0.00 2.92
9 10 3.792047 CACACGTGCAGCCCGATG 61.792 66.667 17.22 0.00 0.00 3.84
10 11 3.825160 AACACACGTGCAGCCCGAT 62.825 57.895 17.22 0.00 0.00 4.18
11 12 4.539083 AACACACGTGCAGCCCGA 62.539 61.111 17.22 0.00 0.00 5.14
12 13 4.312231 CAACACACGTGCAGCCCG 62.312 66.667 17.22 0.00 0.00 6.13
13 14 2.477176 TTCAACACACGTGCAGCCC 61.477 57.895 17.22 0.00 0.00 5.19
14 15 1.298339 GTTCAACACACGTGCAGCC 60.298 57.895 17.22 0.00 0.00 4.85
15 16 1.651132 CGTTCAACACACGTGCAGC 60.651 57.895 17.22 0.00 32.80 5.25
16 17 1.011242 CCGTTCAACACACGTGCAG 60.011 57.895 17.22 11.45 35.81 4.41
17 18 2.465299 CCCGTTCAACACACGTGCA 61.465 57.895 17.22 0.00 35.81 4.57
18 19 2.326550 CCCGTTCAACACACGTGC 59.673 61.111 17.22 0.00 35.81 5.34
19 20 1.495584 CTCCCCGTTCAACACACGTG 61.496 60.000 15.48 15.48 35.81 4.49
20 21 1.227438 CTCCCCGTTCAACACACGT 60.227 57.895 0.00 0.00 35.81 4.49
21 22 1.959226 CCTCCCCGTTCAACACACG 60.959 63.158 0.00 0.00 37.39 4.49
22 23 2.258726 GCCTCCCCGTTCAACACAC 61.259 63.158 0.00 0.00 0.00 3.82
23 24 2.112297 GCCTCCCCGTTCAACACA 59.888 61.111 0.00 0.00 0.00 3.72
24 25 3.047877 CGCCTCCCCGTTCAACAC 61.048 66.667 0.00 0.00 0.00 3.32
36 37 3.774702 GTCGAACAACGGCGCCTC 61.775 66.667 26.68 14.00 42.82 4.70
41 42 1.005294 TCTAAGCGTCGAACAACGGC 61.005 55.000 0.00 0.00 42.81 5.68
42 43 1.582502 GATCTAAGCGTCGAACAACGG 59.417 52.381 0.00 0.00 42.81 4.44
43 44 1.249491 CGATCTAAGCGTCGAACAACG 59.751 52.381 0.00 0.00 45.31 4.10
44 45 1.582502 CCGATCTAAGCGTCGAACAAC 59.417 52.381 0.00 0.00 40.11 3.32
45 46 1.469703 TCCGATCTAAGCGTCGAACAA 59.530 47.619 0.00 0.00 40.11 2.83
46 47 1.089112 TCCGATCTAAGCGTCGAACA 58.911 50.000 0.00 0.00 40.11 3.18
47 48 2.184385 TTCCGATCTAAGCGTCGAAC 57.816 50.000 0.00 0.00 40.11 3.95
48 49 2.356695 TGATTCCGATCTAAGCGTCGAA 59.643 45.455 0.00 0.00 40.11 3.71
49 50 1.944709 TGATTCCGATCTAAGCGTCGA 59.055 47.619 0.00 0.00 40.11 4.20
50 51 2.401017 TGATTCCGATCTAAGCGTCG 57.599 50.000 0.00 0.00 37.58 5.12
51 52 2.795470 GGTTGATTCCGATCTAAGCGTC 59.205 50.000 0.00 0.00 33.28 5.19
52 53 2.822764 GGTTGATTCCGATCTAAGCGT 58.177 47.619 0.00 0.00 33.28 5.07
63 64 1.651987 TTCAGATCGCGGTTGATTCC 58.348 50.000 6.13 0.00 0.00 3.01
64 65 3.611517 CAATTCAGATCGCGGTTGATTC 58.388 45.455 6.13 0.00 0.00 2.52
65 66 2.223340 GCAATTCAGATCGCGGTTGATT 60.223 45.455 6.13 1.82 0.00 2.57
66 67 1.331756 GCAATTCAGATCGCGGTTGAT 59.668 47.619 6.13 0.00 0.00 2.57
67 68 0.726827 GCAATTCAGATCGCGGTTGA 59.273 50.000 6.13 5.06 0.00 3.18
68 69 0.729116 AGCAATTCAGATCGCGGTTG 59.271 50.000 6.13 2.35 0.00 3.77
69 70 1.933853 GTAGCAATTCAGATCGCGGTT 59.066 47.619 6.13 0.00 0.00 4.44
70 71 1.571919 GTAGCAATTCAGATCGCGGT 58.428 50.000 6.13 0.00 0.00 5.68
71 72 0.504384 CGTAGCAATTCAGATCGCGG 59.496 55.000 6.13 0.00 0.00 6.46
72 73 1.449789 CTCGTAGCAATTCAGATCGCG 59.550 52.381 0.00 0.00 0.00 5.87
73 74 2.464865 ACTCGTAGCAATTCAGATCGC 58.535 47.619 0.00 0.00 0.00 4.58
74 75 3.659899 CGTACTCGTAGCAATTCAGATCG 59.340 47.826 0.00 0.00 0.00 3.69
75 76 4.671516 GTCGTACTCGTAGCAATTCAGATC 59.328 45.833 0.00 0.00 38.33 2.75
76 77 4.335874 AGTCGTACTCGTAGCAATTCAGAT 59.664 41.667 0.00 0.00 38.33 2.90
77 78 3.688185 AGTCGTACTCGTAGCAATTCAGA 59.312 43.478 0.00 0.00 38.33 3.27
78 79 4.017380 AGTCGTACTCGTAGCAATTCAG 57.983 45.455 0.00 0.00 38.33 3.02
79 80 3.181503 GGAGTCGTACTCGTAGCAATTCA 60.182 47.826 8.33 0.00 45.96 2.57
80 81 3.065095 AGGAGTCGTACTCGTAGCAATTC 59.935 47.826 7.97 0.00 45.96 2.17
81 82 3.015327 AGGAGTCGTACTCGTAGCAATT 58.985 45.455 7.97 0.00 45.96 2.32
82 83 2.641305 AGGAGTCGTACTCGTAGCAAT 58.359 47.619 7.97 0.00 45.96 3.56
83 84 2.105006 AGGAGTCGTACTCGTAGCAA 57.895 50.000 7.97 0.00 45.96 3.91
84 85 2.005451 GAAGGAGTCGTACTCGTAGCA 58.995 52.381 9.53 0.00 45.96 3.49
85 86 2.005451 TGAAGGAGTCGTACTCGTAGC 58.995 52.381 9.53 6.92 45.96 3.58
86 87 3.248125 GGATGAAGGAGTCGTACTCGTAG 59.752 52.174 9.53 0.00 45.96 3.51
87 88 3.201290 GGATGAAGGAGTCGTACTCGTA 58.799 50.000 9.53 0.00 45.96 3.43
88 89 2.015587 GGATGAAGGAGTCGTACTCGT 58.984 52.381 8.33 6.65 45.96 4.18
89 90 1.003759 CGGATGAAGGAGTCGTACTCG 60.004 57.143 8.33 0.00 45.96 4.18
90 91 1.268640 GCGGATGAAGGAGTCGTACTC 60.269 57.143 6.50 6.50 44.32 2.59
91 92 0.739561 GCGGATGAAGGAGTCGTACT 59.260 55.000 0.00 0.00 0.00 2.73
92 93 0.591741 CGCGGATGAAGGAGTCGTAC 60.592 60.000 0.00 0.00 0.00 3.67
93 94 1.028330 ACGCGGATGAAGGAGTCGTA 61.028 55.000 12.47 0.00 0.00 3.43
94 95 1.874345 AACGCGGATGAAGGAGTCGT 61.874 55.000 12.47 0.00 0.00 4.34
95 96 1.140407 GAACGCGGATGAAGGAGTCG 61.140 60.000 12.47 0.00 0.00 4.18
96 97 0.173708 AGAACGCGGATGAAGGAGTC 59.826 55.000 12.47 0.00 0.00 3.36
97 98 0.608640 AAGAACGCGGATGAAGGAGT 59.391 50.000 12.47 0.00 0.00 3.85
98 99 1.002366 CAAGAACGCGGATGAAGGAG 58.998 55.000 12.47 0.00 0.00 3.69
99 100 0.320374 ACAAGAACGCGGATGAAGGA 59.680 50.000 12.47 0.00 0.00 3.36
100 101 2.004583 TACAAGAACGCGGATGAAGG 57.995 50.000 12.47 0.00 0.00 3.46
101 102 2.222508 CGTTACAAGAACGCGGATGAAG 60.223 50.000 12.47 0.00 36.82 3.02
102 103 1.722464 CGTTACAAGAACGCGGATGAA 59.278 47.619 12.47 0.00 36.82 2.57
103 104 1.342555 CGTTACAAGAACGCGGATGA 58.657 50.000 12.47 0.00 36.82 2.92
104 105 3.850207 CGTTACAAGAACGCGGATG 57.150 52.632 12.47 6.09 36.82 3.51
110 111 3.921081 CGGAAGCGTTACAAGAACG 57.079 52.632 5.50 5.50 45.56 3.95
123 124 1.926561 TGAAGATCACGATGCGGAAG 58.073 50.000 0.00 0.00 0.00 3.46
124 125 2.270923 CTTGAAGATCACGATGCGGAA 58.729 47.619 0.00 0.00 0.00 4.30
125 126 1.471501 CCTTGAAGATCACGATGCGGA 60.472 52.381 0.00 0.00 0.00 5.54
126 127 0.933097 CCTTGAAGATCACGATGCGG 59.067 55.000 0.00 0.00 0.00 5.69
127 128 0.933097 CCCTTGAAGATCACGATGCG 59.067 55.000 0.00 0.00 0.00 4.73
128 129 2.029838 ACCCTTGAAGATCACGATGC 57.970 50.000 0.00 0.00 0.00 3.91
129 130 3.116300 CGTACCCTTGAAGATCACGATG 58.884 50.000 0.00 0.00 0.00 3.84
130 131 3.021695 TCGTACCCTTGAAGATCACGAT 58.978 45.455 9.79 0.00 32.57 3.73
131 132 2.439409 TCGTACCCTTGAAGATCACGA 58.561 47.619 9.79 9.79 34.87 4.35
132 133 2.933495 TCGTACCCTTGAAGATCACG 57.067 50.000 0.00 0.00 0.00 4.35
133 134 4.451629 TCTTCGTACCCTTGAAGATCAC 57.548 45.455 6.79 0.00 44.11 3.06
138 139 2.673368 GTGCATCTTCGTACCCTTGAAG 59.327 50.000 0.00 2.76 42.30 3.02
139 140 2.301870 AGTGCATCTTCGTACCCTTGAA 59.698 45.455 0.00 0.00 0.00 2.69
140 141 1.899814 AGTGCATCTTCGTACCCTTGA 59.100 47.619 0.00 0.00 0.00 3.02
141 142 2.271800 GAGTGCATCTTCGTACCCTTG 58.728 52.381 0.00 0.00 0.00 3.61
142 143 1.207329 GGAGTGCATCTTCGTACCCTT 59.793 52.381 0.00 0.00 0.00 3.95
143 144 0.824759 GGAGTGCATCTTCGTACCCT 59.175 55.000 0.00 0.00 0.00 4.34
144 145 0.179081 GGGAGTGCATCTTCGTACCC 60.179 60.000 0.00 0.00 0.00 3.69
145 146 0.527817 CGGGAGTGCATCTTCGTACC 60.528 60.000 0.00 0.00 0.00 3.34
146 147 0.172803 ACGGGAGTGCATCTTCGTAC 59.827 55.000 12.75 0.00 44.82 3.67
147 148 2.575108 ACGGGAGTGCATCTTCGTA 58.425 52.632 12.75 0.00 44.82 3.43
148 149 3.377656 ACGGGAGTGCATCTTCGT 58.622 55.556 0.00 1.65 44.82 3.85
159 160 1.137825 GCAACGAGAGAGACGGGAG 59.862 63.158 0.00 0.00 34.93 4.30
160 161 0.035725 TAGCAACGAGAGAGACGGGA 60.036 55.000 0.00 0.00 34.93 5.14
161 162 0.378962 CTAGCAACGAGAGAGACGGG 59.621 60.000 0.00 0.00 34.93 5.28
162 163 1.088306 ACTAGCAACGAGAGAGACGG 58.912 55.000 0.00 0.00 34.93 4.79
163 164 3.805422 AGATACTAGCAACGAGAGAGACG 59.195 47.826 0.00 0.00 0.00 4.18
164 165 5.294799 TGAAGATACTAGCAACGAGAGAGAC 59.705 44.000 0.00 0.00 0.00 3.36
165 166 5.429130 TGAAGATACTAGCAACGAGAGAGA 58.571 41.667 0.00 0.00 0.00 3.10
166 167 5.743026 TGAAGATACTAGCAACGAGAGAG 57.257 43.478 0.00 0.00 0.00 3.20
167 168 7.217906 TCTATGAAGATACTAGCAACGAGAGA 58.782 38.462 0.00 0.00 0.00 3.10
168 169 7.428282 TCTATGAAGATACTAGCAACGAGAG 57.572 40.000 0.00 0.00 0.00 3.20
169 170 7.987750 ATCTATGAAGATACTAGCAACGAGA 57.012 36.000 0.00 0.00 40.82 4.04
170 171 8.293157 TCAATCTATGAAGATACTAGCAACGAG 58.707 37.037 0.00 0.00 41.81 4.18
171 172 8.166422 TCAATCTATGAAGATACTAGCAACGA 57.834 34.615 0.00 0.00 41.81 3.85
172 173 8.978564 ATCAATCTATGAAGATACTAGCAACG 57.021 34.615 0.00 0.00 41.81 4.10
176 177 9.585099 CCAAGATCAATCTATGAAGATACTAGC 57.415 37.037 0.00 0.00 41.81 3.42
179 180 9.152327 TCACCAAGATCAATCTATGAAGATACT 57.848 33.333 0.00 0.00 41.81 2.12
180 181 9.941325 ATCACCAAGATCAATCTATGAAGATAC 57.059 33.333 0.00 0.00 42.54 2.24
181 182 9.939802 CATCACCAAGATCAATCTATGAAGATA 57.060 33.333 0.00 0.00 42.54 1.98
182 183 7.390996 GCATCACCAAGATCAATCTATGAAGAT 59.609 37.037 0.00 0.00 42.54 2.40
183 184 6.709397 GCATCACCAAGATCAATCTATGAAGA 59.291 38.462 0.00 0.00 42.54 2.87
184 185 6.347483 CGCATCACCAAGATCAATCTATGAAG 60.347 42.308 0.00 3.33 42.54 3.02
185 186 5.467735 CGCATCACCAAGATCAATCTATGAA 59.532 40.000 0.00 0.00 42.54 2.57
186 187 4.992951 CGCATCACCAAGATCAATCTATGA 59.007 41.667 0.00 4.70 43.67 2.15
187 188 4.753610 ACGCATCACCAAGATCAATCTATG 59.246 41.667 0.00 0.00 35.76 2.23
188 189 4.965814 ACGCATCACCAAGATCAATCTAT 58.034 39.130 0.00 0.00 35.76 1.98
189 190 4.406648 ACGCATCACCAAGATCAATCTA 57.593 40.909 0.00 0.00 35.76 1.98
190 191 3.272574 ACGCATCACCAAGATCAATCT 57.727 42.857 0.00 0.00 39.22 2.40
191 192 4.371786 TCTACGCATCACCAAGATCAATC 58.628 43.478 0.00 0.00 33.72 2.67
192 193 4.406648 TCTACGCATCACCAAGATCAAT 57.593 40.909 0.00 0.00 33.72 2.57
193 194 3.885724 TCTACGCATCACCAAGATCAA 57.114 42.857 0.00 0.00 33.72 2.57
194 195 3.885724 TTCTACGCATCACCAAGATCA 57.114 42.857 0.00 0.00 33.72 2.92
195 196 5.741388 ATTTTCTACGCATCACCAAGATC 57.259 39.130 0.00 0.00 33.72 2.75
196 197 6.515272 AAATTTTCTACGCATCACCAAGAT 57.485 33.333 0.00 0.00 37.48 2.40
197 198 5.957842 AAATTTTCTACGCATCACCAAGA 57.042 34.783 0.00 0.00 0.00 3.02
198 199 8.514136 TTTAAAATTTTCTACGCATCACCAAG 57.486 30.769 6.72 0.00 0.00 3.61
199 200 9.482627 AATTTAAAATTTTCTACGCATCACCAA 57.517 25.926 6.72 0.00 0.00 3.67
200 201 9.482627 AAATTTAAAATTTTCTACGCATCACCA 57.517 25.926 6.72 0.00 0.00 4.17
201 202 9.952341 GAAATTTAAAATTTTCTACGCATCACC 57.048 29.630 6.72 0.00 0.00 4.02
204 205 9.675553 GCAGAAATTTAAAATTTTCTACGCATC 57.324 29.630 13.75 0.00 39.53 3.91
205 206 9.423061 AGCAGAAATTTAAAATTTTCTACGCAT 57.577 25.926 18.89 9.01 39.53 4.73
206 207 8.810652 AGCAGAAATTTAAAATTTTCTACGCA 57.189 26.923 18.89 0.00 39.53 5.24
213 214 8.984764 GGGAACGTAGCAGAAATTTAAAATTTT 58.015 29.630 8.75 8.75 0.00 1.82
214 215 7.601130 GGGGAACGTAGCAGAAATTTAAAATTT 59.399 33.333 0.00 0.00 0.00 1.82
215 216 7.094631 GGGGAACGTAGCAGAAATTTAAAATT 58.905 34.615 0.00 0.00 0.00 1.82
216 217 6.209788 TGGGGAACGTAGCAGAAATTTAAAAT 59.790 34.615 0.00 0.00 0.00 1.82
217 218 5.535406 TGGGGAACGTAGCAGAAATTTAAAA 59.465 36.000 0.00 0.00 0.00 1.52
218 219 5.071370 TGGGGAACGTAGCAGAAATTTAAA 58.929 37.500 0.00 0.00 0.00 1.52
219 220 4.653868 TGGGGAACGTAGCAGAAATTTAA 58.346 39.130 0.00 0.00 0.00 1.52
220 221 4.289238 TGGGGAACGTAGCAGAAATTTA 57.711 40.909 0.00 0.00 0.00 1.40
221 222 3.149005 TGGGGAACGTAGCAGAAATTT 57.851 42.857 0.00 0.00 0.00 1.82
222 223 2.817844 GTTGGGGAACGTAGCAGAAATT 59.182 45.455 0.00 0.00 0.00 1.82
223 224 2.224670 TGTTGGGGAACGTAGCAGAAAT 60.225 45.455 0.00 0.00 0.00 2.17
224 225 1.141254 TGTTGGGGAACGTAGCAGAAA 59.859 47.619 0.00 0.00 0.00 2.52
225 226 0.759959 TGTTGGGGAACGTAGCAGAA 59.240 50.000 0.00 0.00 0.00 3.02
226 227 0.981183 ATGTTGGGGAACGTAGCAGA 59.019 50.000 0.00 0.00 0.00 4.26
227 228 1.468520 CAATGTTGGGGAACGTAGCAG 59.531 52.381 0.00 0.00 0.00 4.24
228 229 1.529226 CAATGTTGGGGAACGTAGCA 58.471 50.000 0.00 0.00 0.00 3.49
229 230 0.170339 GCAATGTTGGGGAACGTAGC 59.830 55.000 0.00 0.00 0.00 3.58
230 231 0.808755 GGCAATGTTGGGGAACGTAG 59.191 55.000 0.00 0.00 0.00 3.51
231 232 0.110678 TGGCAATGTTGGGGAACGTA 59.889 50.000 0.00 0.00 0.00 3.57
232 233 0.757188 TTGGCAATGTTGGGGAACGT 60.757 50.000 0.00 0.00 0.00 3.99
233 234 0.038343 CTTGGCAATGTTGGGGAACG 60.038 55.000 0.00 0.00 0.00 3.95
234 235 0.321346 CCTTGGCAATGTTGGGGAAC 59.679 55.000 0.00 0.00 0.00 3.62
235 236 0.105246 ACCTTGGCAATGTTGGGGAA 60.105 50.000 0.00 0.00 0.00 3.97
236 237 0.105246 AACCTTGGCAATGTTGGGGA 60.105 50.000 18.20 0.00 0.00 4.81
237 238 0.035176 CAACCTTGGCAATGTTGGGG 59.965 55.000 29.43 17.06 36.57 4.96
238 239 0.758123 ACAACCTTGGCAATGTTGGG 59.242 50.000 35.29 21.85 42.75 4.12
239 240 1.688197 AGACAACCTTGGCAATGTTGG 59.312 47.619 35.29 23.84 42.75 3.77
240 241 3.125316 CAAGACAACCTTGGCAATGTTG 58.875 45.455 32.83 32.83 46.54 3.33
241 242 3.457610 CAAGACAACCTTGGCAATGTT 57.542 42.857 14.08 14.08 46.54 2.71
267 268 4.710313 TTTCCCTCGGAAACTCCTTTTA 57.290 40.909 1.66 0.00 45.42 1.52
285 286 4.229876 CCGCTTTGACATTCTCCTTTTTC 58.770 43.478 0.00 0.00 0.00 2.29
318 319 5.475719 CAATGACAAAGAGGTGATTGCATT 58.524 37.500 0.00 0.00 36.01 3.56
407 408 3.028850 CCTGATCCAGTTTTCATGCCAT 58.971 45.455 0.00 0.00 0.00 4.40
452 457 4.761739 AGAAACGCTCAATTCCTTCATGAA 59.238 37.500 8.12 8.12 0.00 2.57
456 461 2.736721 CGAGAAACGCTCAATTCCTTCA 59.263 45.455 0.00 0.00 44.15 3.02
472 477 6.637657 TCAGCGACCTAGATATATACGAGAA 58.362 40.000 0.00 0.00 0.00 2.87
474 479 6.757478 TCTTCAGCGACCTAGATATATACGAG 59.243 42.308 0.00 0.00 0.00 4.18
478 483 7.553402 GGTTCTCTTCAGCGACCTAGATATATA 59.447 40.741 0.00 0.00 0.00 0.86
479 484 6.376018 GGTTCTCTTCAGCGACCTAGATATAT 59.624 42.308 0.00 0.00 0.00 0.86
521 526 2.665603 GTGTGCTCCTCCTCCACC 59.334 66.667 0.00 0.00 0.00 4.61
605 610 1.335872 GCCCACAAAAAGGATGACGTG 60.336 52.381 0.00 0.00 0.00 4.49
757 766 2.521958 ATAACTCGGCCAGTGCGCTT 62.522 55.000 9.73 0.00 38.85 4.68
824 833 6.653526 ATTGACAACTCATGATTGGAAACA 57.346 33.333 16.89 10.87 39.83 2.83
873 882 3.333029 TGATGATTGAGGAACGCTTGA 57.667 42.857 0.00 0.00 0.00 3.02
875 884 3.118112 AGGATGATGATTGAGGAACGCTT 60.118 43.478 0.00 0.00 0.00 4.68
905 915 6.448006 GGTCGTGTGTGCTTATATAGAATCT 58.552 40.000 0.00 0.00 0.00 2.40
923 934 1.742880 TCTACGTCTCGGGGTCGTG 60.743 63.158 10.36 1.35 38.27 4.35
949 974 5.393866 AGGAAGATGAGAGGAGGTAGATTC 58.606 45.833 0.00 0.00 0.00 2.52
965 992 1.563410 CTGGCTCAGGGAAAGGAAGAT 59.437 52.381 0.00 0.00 0.00 2.40
993 1042 0.674895 GCTTCGACACCATTGCTCCT 60.675 55.000 0.00 0.00 0.00 3.69
994 1043 0.955428 TGCTTCGACACCATTGCTCC 60.955 55.000 0.00 0.00 0.00 4.70
1004 1053 2.354704 CCATTACCCTTCTGCTTCGACA 60.355 50.000 0.00 0.00 0.00 4.35
1006 1055 1.209504 CCCATTACCCTTCTGCTTCGA 59.790 52.381 0.00 0.00 0.00 3.71
1334 1387 1.845809 CTCCACACACTCTTTGCGCC 61.846 60.000 4.18 0.00 0.00 6.53
1347 1400 2.079088 TTGCCATGGCCTTCTCCACA 62.079 55.000 33.44 9.03 39.25 4.17
1484 1537 1.225376 CGCCTGGTTTGTGCGTTCTA 61.225 55.000 0.00 0.00 43.12 2.10
1562 1624 2.699954 AGGTACTGCCATCGAAAAGTG 58.300 47.619 0.00 0.00 37.18 3.16
1563 1625 3.418684 AAGGTACTGCCATCGAAAAGT 57.581 42.857 0.00 0.00 40.86 2.66
1566 1628 3.244422 ACTCAAAGGTACTGCCATCGAAA 60.244 43.478 0.00 0.00 40.86 3.46
1571 1633 3.157087 CCAAACTCAAAGGTACTGCCAT 58.843 45.455 0.00 0.00 40.86 4.40
1727 1798 4.912317 AGAATCTGCTGCATATCCATCT 57.088 40.909 1.31 0.00 0.00 2.90
1911 1991 2.070650 GGCTATTCCCGTGGGAGGT 61.071 63.158 7.85 4.09 46.06 3.85
1982 2062 1.077644 TCGTCTCCTTCTCCTCCGG 60.078 63.158 0.00 0.00 0.00 5.14
1984 2064 1.385528 GTCTCGTCTCCTTCTCCTCC 58.614 60.000 0.00 0.00 0.00 4.30
1999 2079 0.465097 TCGGACTCGGTATGGGTCTC 60.465 60.000 0.00 0.00 36.95 3.36
2003 2083 1.453762 GGACTCGGACTCGGTATGGG 61.454 65.000 0.00 0.00 36.95 4.00
2133 2227 2.695666 CACCCAGGTAGATCGATCAAGT 59.304 50.000 26.47 9.41 0.00 3.16
2203 2308 1.496060 TTCTCTGGTGCCACCGATAT 58.504 50.000 9.78 0.00 42.58 1.63
2272 2380 5.521010 CACATTTCATTCTTGTGTTGTTGCT 59.479 36.000 0.00 0.00 36.77 3.91
2542 5027 9.942850 TCAAAAACTCCTTTCTTTCTTTTCAAT 57.057 25.926 0.00 0.00 0.00 2.57
2566 5051 8.811994 TCCTTTTCTTTCTTTTCTTTTTCCTCA 58.188 29.630 0.00 0.00 0.00 3.86
2591 5078 1.064654 GCCGCTTTGACATTCTCCATC 59.935 52.381 0.00 0.00 0.00 3.51
2593 5080 0.036732 AGCCGCTTTGACATTCTCCA 59.963 50.000 0.00 0.00 0.00 3.86
2655 5226 6.992715 GTCACTGGCCTAATAGTCATATGTTT 59.007 38.462 3.32 0.00 0.00 2.83
2656 5227 6.327626 AGTCACTGGCCTAATAGTCATATGTT 59.672 38.462 3.32 0.00 0.00 2.71
2751 5322 1.623973 GGTTAGTTCGCACTCCACGC 61.624 60.000 0.00 0.00 34.06 5.34
2753 5324 1.270147 ACAGGTTAGTTCGCACTCCAC 60.270 52.381 0.00 0.00 34.06 4.02
2761 5332 1.588674 TGCAACCACAGGTTAGTTCG 58.411 50.000 0.40 0.00 45.01 3.95
2762 5333 3.146066 TCATGCAACCACAGGTTAGTTC 58.854 45.455 0.40 0.00 45.01 3.01
2763 5334 3.222173 TCATGCAACCACAGGTTAGTT 57.778 42.857 0.40 0.00 45.01 2.24
2764 5335 2.949177 TCATGCAACCACAGGTTAGT 57.051 45.000 0.40 0.00 45.01 2.24
2765 5336 5.185454 TCTAATCATGCAACCACAGGTTAG 58.815 41.667 0.40 0.00 45.01 2.34
2766 5337 5.172687 TCTAATCATGCAACCACAGGTTA 57.827 39.130 0.40 0.00 45.01 2.85
2768 5339 3.614092 CTCTAATCATGCAACCACAGGT 58.386 45.455 0.00 0.00 37.65 4.00
2769 5340 2.947652 CCTCTAATCATGCAACCACAGG 59.052 50.000 0.00 0.00 0.00 4.00
2770 5341 2.947652 CCCTCTAATCATGCAACCACAG 59.052 50.000 0.00 0.00 0.00 3.66
2771 5342 2.575735 TCCCTCTAATCATGCAACCACA 59.424 45.455 0.00 0.00 0.00 4.17
2772 5343 2.945668 GTCCCTCTAATCATGCAACCAC 59.054 50.000 0.00 0.00 0.00 4.16
2773 5344 2.575735 TGTCCCTCTAATCATGCAACCA 59.424 45.455 0.00 0.00 0.00 3.67
2774 5345 3.209410 CTGTCCCTCTAATCATGCAACC 58.791 50.000 0.00 0.00 0.00 3.77
2775 5346 3.624861 CACTGTCCCTCTAATCATGCAAC 59.375 47.826 0.00 0.00 0.00 4.17
2776 5347 3.370846 CCACTGTCCCTCTAATCATGCAA 60.371 47.826 0.00 0.00 0.00 4.08
2777 5348 2.171237 CCACTGTCCCTCTAATCATGCA 59.829 50.000 0.00 0.00 0.00 3.96
2778 5349 2.171448 ACCACTGTCCCTCTAATCATGC 59.829 50.000 0.00 0.00 0.00 4.06
2779 5350 5.279708 GGATACCACTGTCCCTCTAATCATG 60.280 48.000 0.00 0.00 0.00 3.07
2780 5351 4.841246 GGATACCACTGTCCCTCTAATCAT 59.159 45.833 0.00 0.00 0.00 2.45
2781 5352 4.223953 GGATACCACTGTCCCTCTAATCA 58.776 47.826 0.00 0.00 0.00 2.57
2782 5353 4.875561 GGATACCACTGTCCCTCTAATC 57.124 50.000 0.00 0.00 0.00 1.75
2798 5369 1.222567 ATCTGGTGGGTTGGGGATAC 58.777 55.000 0.00 0.00 0.00 2.24
2799 5370 1.994399 AATCTGGTGGGTTGGGGATA 58.006 50.000 0.00 0.00 0.00 2.59
2800 5371 1.092549 AAATCTGGTGGGTTGGGGAT 58.907 50.000 0.00 0.00 0.00 3.85
2801 5372 1.761711 TAAATCTGGTGGGTTGGGGA 58.238 50.000 0.00 0.00 0.00 4.81
2802 5373 2.225267 ACTTAAATCTGGTGGGTTGGGG 60.225 50.000 0.00 0.00 0.00 4.96
2803 5374 3.089284 GACTTAAATCTGGTGGGTTGGG 58.911 50.000 0.00 0.00 0.00 4.12
2804 5375 3.089284 GGACTTAAATCTGGTGGGTTGG 58.911 50.000 0.00 0.00 0.00 3.77
2805 5376 3.758554 CAGGACTTAAATCTGGTGGGTTG 59.241 47.826 0.00 0.00 0.00 3.77
2806 5377 3.245264 CCAGGACTTAAATCTGGTGGGTT 60.245 47.826 9.16 0.00 42.17 4.11
2807 5378 2.308866 CCAGGACTTAAATCTGGTGGGT 59.691 50.000 9.16 0.00 42.17 4.51
2808 5379 3.004752 CCAGGACTTAAATCTGGTGGG 57.995 52.381 9.16 0.00 42.17 4.61
2813 5384 3.125316 GCGAACACCAGGACTTAAATCTG 59.875 47.826 0.00 0.00 0.00 2.90
2814 5385 3.244422 TGCGAACACCAGGACTTAAATCT 60.244 43.478 0.00 0.00 0.00 2.40
2815 5386 3.071479 TGCGAACACCAGGACTTAAATC 58.929 45.455 0.00 0.00 0.00 2.17
2816 5387 3.134574 TGCGAACACCAGGACTTAAAT 57.865 42.857 0.00 0.00 0.00 1.40
2817 5388 2.623878 TGCGAACACCAGGACTTAAA 57.376 45.000 0.00 0.00 0.00 1.52
2818 5389 2.851263 ATGCGAACACCAGGACTTAA 57.149 45.000 0.00 0.00 0.00 1.85
2819 5390 3.965379 TTATGCGAACACCAGGACTTA 57.035 42.857 0.00 0.00 0.00 2.24
2820 5391 2.851263 TTATGCGAACACCAGGACTT 57.149 45.000 0.00 0.00 0.00 3.01
2821 5392 3.270877 GAATTATGCGAACACCAGGACT 58.729 45.455 0.00 0.00 0.00 3.85
2822 5393 2.354821 GGAATTATGCGAACACCAGGAC 59.645 50.000 0.00 0.00 0.00 3.85
2823 5394 2.238646 AGGAATTATGCGAACACCAGGA 59.761 45.455 0.00 0.00 0.00 3.86
2824 5395 2.355756 CAGGAATTATGCGAACACCAGG 59.644 50.000 0.00 0.00 0.00 4.45
2825 5396 2.355756 CCAGGAATTATGCGAACACCAG 59.644 50.000 0.00 0.00 0.00 4.00
2826 5397 2.026729 TCCAGGAATTATGCGAACACCA 60.027 45.455 0.00 0.00 0.00 4.17
2827 5398 2.639065 TCCAGGAATTATGCGAACACC 58.361 47.619 0.00 0.00 0.00 4.16
2828 5399 4.900635 AATCCAGGAATTATGCGAACAC 57.099 40.909 0.00 0.00 0.00 3.32
2829 5400 7.581213 AATAAATCCAGGAATTATGCGAACA 57.419 32.000 10.15 0.00 0.00 3.18
2830 5401 8.134895 TGAAATAAATCCAGGAATTATGCGAAC 58.865 33.333 10.15 2.88 0.00 3.95
2831 5402 8.231692 TGAAATAAATCCAGGAATTATGCGAA 57.768 30.769 10.15 0.00 0.00 4.70
2832 5403 7.815840 TGAAATAAATCCAGGAATTATGCGA 57.184 32.000 10.15 0.00 0.00 5.10
2842 5413 5.882557 CCGGATATCCTGAAATAAATCCAGG 59.117 44.000 19.61 4.36 46.64 4.45
2843 5414 5.355350 GCCGGATATCCTGAAATAAATCCAG 59.645 44.000 19.61 0.00 33.91 3.86
2844 5415 5.253330 GCCGGATATCCTGAAATAAATCCA 58.747 41.667 19.61 0.00 33.91 3.41
2845 5416 4.332819 CGCCGGATATCCTGAAATAAATCC 59.667 45.833 19.61 0.00 0.00 3.01
2846 5417 5.175859 TCGCCGGATATCCTGAAATAAATC 58.824 41.667 19.61 0.00 0.00 2.17
2847 5418 5.160607 TCGCCGGATATCCTGAAATAAAT 57.839 39.130 19.61 0.00 0.00 1.40
2848 5419 4.610605 TCGCCGGATATCCTGAAATAAA 57.389 40.909 19.61 0.00 0.00 1.40
2849 5420 4.503910 CATCGCCGGATATCCTGAAATAA 58.496 43.478 19.61 0.00 0.00 1.40
2850 5421 3.678806 GCATCGCCGGATATCCTGAAATA 60.679 47.826 19.61 0.99 0.00 1.40
2851 5422 2.936993 GCATCGCCGGATATCCTGAAAT 60.937 50.000 19.61 7.41 0.00 2.17
2852 5423 1.608025 GCATCGCCGGATATCCTGAAA 60.608 52.381 19.61 5.42 0.00 2.69
2853 5424 0.037326 GCATCGCCGGATATCCTGAA 60.037 55.000 19.61 5.76 0.00 3.02
2854 5425 1.184970 TGCATCGCCGGATATCCTGA 61.185 55.000 19.61 14.12 0.00 3.86
2855 5426 1.016130 GTGCATCGCCGGATATCCTG 61.016 60.000 19.61 14.21 0.00 3.86
2856 5427 1.188219 AGTGCATCGCCGGATATCCT 61.188 55.000 19.61 0.00 0.00 3.24
2857 5428 0.320771 AAGTGCATCGCCGGATATCC 60.321 55.000 12.14 12.14 0.00 2.59
2858 5429 1.461127 GAAAGTGCATCGCCGGATATC 59.539 52.381 5.05 0.00 0.00 1.63
2859 5430 1.202639 TGAAAGTGCATCGCCGGATAT 60.203 47.619 5.05 0.00 0.00 1.63
2860 5431 0.176910 TGAAAGTGCATCGCCGGATA 59.823 50.000 5.05 0.00 0.00 2.59
2861 5432 1.078497 TGAAAGTGCATCGCCGGAT 60.078 52.632 5.05 0.00 0.00 4.18
2862 5433 1.741401 CTGAAAGTGCATCGCCGGA 60.741 57.895 5.05 0.00 0.00 5.14
2863 5434 2.787249 CTGAAAGTGCATCGCCGG 59.213 61.111 0.00 0.00 0.00 6.13
2873 5444 6.091299 GGAACATCTCCTCCCACTGAAAGT 62.091 50.000 0.00 0.00 45.65 2.66
2874 5445 3.604582 GAACATCTCCTCCCACTGAAAG 58.395 50.000 0.00 0.00 42.29 2.62
2875 5446 2.305927 GGAACATCTCCTCCCACTGAAA 59.694 50.000 0.00 0.00 41.61 2.69
2876 5447 1.909302 GGAACATCTCCTCCCACTGAA 59.091 52.381 0.00 0.00 41.61 3.02
2877 5448 1.573108 GGAACATCTCCTCCCACTGA 58.427 55.000 0.00 0.00 41.61 3.41
2882 5453 1.823976 GACGGGAACATCTCCTCCC 59.176 63.158 0.00 0.00 46.97 4.30
2883 5454 1.035932 TCGACGGGAACATCTCCTCC 61.036 60.000 0.00 0.00 44.68 4.30
2884 5455 0.100861 GTCGACGGGAACATCTCCTC 59.899 60.000 0.00 0.00 44.68 3.71
2885 5456 1.654954 CGTCGACGGGAACATCTCCT 61.655 60.000 29.70 0.00 44.68 3.69
2886 5457 1.226603 CGTCGACGGGAACATCTCC 60.227 63.158 29.70 0.00 44.54 3.71
2887 5458 0.522915 GTCGTCGACGGGAACATCTC 60.523 60.000 35.05 12.17 40.29 2.75
2888 5459 1.505353 GTCGTCGACGGGAACATCT 59.495 57.895 35.05 0.00 40.29 2.90
2889 5460 4.068302 GTCGTCGACGGGAACATC 57.932 61.111 35.05 14.32 40.29 3.06
2918 5489 4.451629 TCTTGAGATTTACGGAGTCACC 57.548 45.455 0.00 0.00 43.93 4.02
2919 5490 5.651530 TCATCTTGAGATTTACGGAGTCAC 58.348 41.667 0.00 0.00 35.39 3.67
2920 5491 5.914898 TCATCTTGAGATTTACGGAGTCA 57.085 39.130 0.00 0.00 35.39 3.41
2921 5492 8.085296 ACATATCATCTTGAGATTTACGGAGTC 58.915 37.037 0.00 0.00 35.39 3.36
2922 5493 7.957002 ACATATCATCTTGAGATTTACGGAGT 58.043 34.615 0.00 0.00 37.29 3.85
2923 5494 8.303156 AGACATATCATCTTGAGATTTACGGAG 58.697 37.037 0.00 0.00 31.21 4.63
2924 5495 8.084684 CAGACATATCATCTTGAGATTTACGGA 58.915 37.037 0.00 0.00 31.21 4.69
2925 5496 7.148672 GCAGACATATCATCTTGAGATTTACGG 60.149 40.741 0.00 0.00 31.21 4.02
2926 5497 7.598118 AGCAGACATATCATCTTGAGATTTACG 59.402 37.037 0.00 0.00 31.21 3.18
2927 5498 8.830201 AGCAGACATATCATCTTGAGATTTAC 57.170 34.615 0.00 0.00 31.21 2.01
2928 5499 7.811713 CGAGCAGACATATCATCTTGAGATTTA 59.188 37.037 0.00 0.00 31.21 1.40
2929 5500 6.645827 CGAGCAGACATATCATCTTGAGATTT 59.354 38.462 0.00 0.00 31.21 2.17
2930 5501 6.157904 CGAGCAGACATATCATCTTGAGATT 58.842 40.000 0.00 0.00 31.21 2.40
2931 5502 5.336610 CCGAGCAGACATATCATCTTGAGAT 60.337 44.000 0.00 0.00 34.56 2.75
2932 5503 4.022503 CCGAGCAGACATATCATCTTGAGA 60.023 45.833 0.00 0.00 0.00 3.27
2933 5504 4.236147 CCGAGCAGACATATCATCTTGAG 58.764 47.826 0.00 0.00 0.00 3.02
2934 5505 3.638627 ACCGAGCAGACATATCATCTTGA 59.361 43.478 0.00 0.00 0.00 3.02
2935 5506 3.986572 GACCGAGCAGACATATCATCTTG 59.013 47.826 0.00 0.00 0.00 3.02
2936 5507 3.894427 AGACCGAGCAGACATATCATCTT 59.106 43.478 0.00 0.00 0.00 2.40
2937 5508 3.495331 AGACCGAGCAGACATATCATCT 58.505 45.455 0.00 0.00 0.00 2.90
2938 5509 3.505680 AGAGACCGAGCAGACATATCATC 59.494 47.826 0.00 0.00 0.00 2.92
2939 5510 3.495331 AGAGACCGAGCAGACATATCAT 58.505 45.455 0.00 0.00 0.00 2.45
2940 5511 2.881513 GAGAGACCGAGCAGACATATCA 59.118 50.000 0.00 0.00 0.00 2.15
2941 5512 2.881513 TGAGAGACCGAGCAGACATATC 59.118 50.000 0.00 0.00 0.00 1.63
2942 5513 2.884012 CTGAGAGACCGAGCAGACATAT 59.116 50.000 0.00 0.00 0.00 1.78
2943 5514 2.092914 TCTGAGAGACCGAGCAGACATA 60.093 50.000 0.00 0.00 32.85 2.29
2944 5515 1.102154 CTGAGAGACCGAGCAGACAT 58.898 55.000 0.00 0.00 0.00 3.06
2945 5516 0.036875 TCTGAGAGACCGAGCAGACA 59.963 55.000 0.00 0.00 32.85 3.41
2946 5517 1.065401 CATCTGAGAGACCGAGCAGAC 59.935 57.143 0.00 0.00 39.88 3.51
2947 5518 1.340502 ACATCTGAGAGACCGAGCAGA 60.341 52.381 0.00 0.00 41.14 4.26
2948 5519 1.102154 ACATCTGAGAGACCGAGCAG 58.898 55.000 0.00 0.00 0.00 4.24
2949 5520 0.813821 CACATCTGAGAGACCGAGCA 59.186 55.000 0.00 0.00 0.00 4.26
2950 5521 0.527385 GCACATCTGAGAGACCGAGC 60.527 60.000 0.00 0.00 0.00 5.03
2951 5522 1.065401 GAGCACATCTGAGAGACCGAG 59.935 57.143 0.00 0.00 0.00 4.63
2952 5523 1.098869 GAGCACATCTGAGAGACCGA 58.901 55.000 0.00 0.00 0.00 4.69
2953 5524 0.813821 TGAGCACATCTGAGAGACCG 59.186 55.000 0.00 0.00 0.00 4.79
2954 5525 3.636300 ACTATGAGCACATCTGAGAGACC 59.364 47.826 0.00 0.00 37.87 3.85
2955 5526 4.499526 CCACTATGAGCACATCTGAGAGAC 60.500 50.000 0.00 0.00 37.87 3.36
2956 5527 3.635836 CCACTATGAGCACATCTGAGAGA 59.364 47.826 0.00 0.00 37.87 3.10
2957 5528 3.384146 ACCACTATGAGCACATCTGAGAG 59.616 47.826 0.00 0.00 37.87 3.20
2958 5529 3.369175 ACCACTATGAGCACATCTGAGA 58.631 45.455 0.00 0.00 37.87 3.27
2959 5530 3.815856 ACCACTATGAGCACATCTGAG 57.184 47.619 0.00 0.00 37.87 3.35
2960 5531 3.638627 CCTACCACTATGAGCACATCTGA 59.361 47.826 0.00 0.00 37.87 3.27
2961 5532 3.244009 CCCTACCACTATGAGCACATCTG 60.244 52.174 0.00 0.00 37.87 2.90
2962 5533 2.968574 CCCTACCACTATGAGCACATCT 59.031 50.000 0.00 0.00 37.87 2.90
2963 5534 2.700897 ACCCTACCACTATGAGCACATC 59.299 50.000 0.00 0.00 37.87 3.06
2964 5535 2.435805 CACCCTACCACTATGAGCACAT 59.564 50.000 1.31 1.31 40.16 3.21
2965 5536 1.831106 CACCCTACCACTATGAGCACA 59.169 52.381 0.00 0.00 0.00 4.57
2966 5537 1.831736 ACACCCTACCACTATGAGCAC 59.168 52.381 0.00 0.00 0.00 4.40
2967 5538 1.831106 CACACCCTACCACTATGAGCA 59.169 52.381 0.00 0.00 0.00 4.26
2968 5539 1.473434 GCACACCCTACCACTATGAGC 60.473 57.143 0.00 0.00 0.00 4.26
2969 5540 1.202417 CGCACACCCTACCACTATGAG 60.202 57.143 0.00 0.00 0.00 2.90
2970 5541 0.821517 CGCACACCCTACCACTATGA 59.178 55.000 0.00 0.00 0.00 2.15
2971 5542 0.535335 ACGCACACCCTACCACTATG 59.465 55.000 0.00 0.00 0.00 2.23
2972 5543 0.535335 CACGCACACCCTACCACTAT 59.465 55.000 0.00 0.00 0.00 2.12
2973 5544 0.828762 ACACGCACACCCTACCACTA 60.829 55.000 0.00 0.00 0.00 2.74
2974 5545 0.828762 TACACGCACACCCTACCACT 60.829 55.000 0.00 0.00 0.00 4.00
2975 5546 0.248289 ATACACGCACACCCTACCAC 59.752 55.000 0.00 0.00 0.00 4.16
2976 5547 0.248012 CATACACGCACACCCTACCA 59.752 55.000 0.00 0.00 0.00 3.25
2977 5548 1.087771 GCATACACGCACACCCTACC 61.088 60.000 0.00 0.00 0.00 3.18
2978 5549 0.390603 TGCATACACGCACACCCTAC 60.391 55.000 0.00 0.00 36.86 3.18
2979 5550 0.539518 ATGCATACACGCACACCCTA 59.460 50.000 0.00 0.00 46.56 3.53
2980 5551 0.322456 AATGCATACACGCACACCCT 60.322 50.000 0.00 0.00 46.56 4.34
2981 5552 0.098728 GAATGCATACACGCACACCC 59.901 55.000 0.00 0.00 46.56 4.61
2982 5553 0.801872 TGAATGCATACACGCACACC 59.198 50.000 0.00 0.00 46.56 4.16
2983 5554 2.830772 ATGAATGCATACACGCACAC 57.169 45.000 0.00 0.00 46.56 3.82
2984 5555 4.633565 TCTTTATGAATGCATACACGCACA 59.366 37.500 0.00 0.00 46.56 4.57
2985 5556 5.155509 TCTTTATGAATGCATACACGCAC 57.844 39.130 0.00 0.00 46.56 5.34
2986 5557 5.526846 TCATCTTTATGAATGCATACACGCA 59.473 36.000 0.00 0.00 40.77 5.24
2987 5558 5.989249 TCATCTTTATGAATGCATACACGC 58.011 37.500 0.00 0.00 39.20 5.34
2988 5559 7.067728 CACTCATCTTTATGAATGCATACACG 58.932 38.462 0.00 0.00 41.57 4.49
2989 5560 7.923888 ACACTCATCTTTATGAATGCATACAC 58.076 34.615 0.00 0.00 41.91 2.90
2990 5561 9.783081 ATACACTCATCTTTATGAATGCATACA 57.217 29.630 0.00 0.00 41.91 2.29
2992 5563 8.724229 GCATACACTCATCTTTATGAATGCATA 58.276 33.333 0.00 0.00 44.61 3.14
2993 5564 7.572539 CGCATACACTCATCTTTATGAATGCAT 60.573 37.037 16.73 0.00 45.05 3.96
2994 5565 6.293027 CGCATACACTCATCTTTATGAATGCA 60.293 38.462 16.73 0.00 45.05 3.96
2995 5566 6.075918 CGCATACACTCATCTTTATGAATGC 58.924 40.000 10.56 10.56 41.91 3.56
2996 5567 6.075918 GCGCATACACTCATCTTTATGAATG 58.924 40.000 0.30 0.00 43.41 2.67
2997 5568 5.759763 TGCGCATACACTCATCTTTATGAAT 59.240 36.000 5.66 0.00 41.57 2.57
2998 5569 5.115480 TGCGCATACACTCATCTTTATGAA 58.885 37.500 5.66 0.00 41.57 2.57
2999 5570 4.692228 TGCGCATACACTCATCTTTATGA 58.308 39.130 5.66 0.00 39.87 2.15
3000 5571 5.602458 ATGCGCATACACTCATCTTTATG 57.398 39.130 24.02 0.00 0.00 1.90
3003 5574 9.038803 CATATATATGCGCATACACTCATCTTT 57.961 33.333 31.17 14.27 0.00 2.52
3004 5575 8.416329 TCATATATATGCGCATACACTCATCTT 58.584 33.333 31.17 14.98 33.76 2.40
3005 5576 7.945134 TCATATATATGCGCATACACTCATCT 58.055 34.615 31.17 15.68 33.76 2.90
3006 5577 8.483218 GTTCATATATATGCGCATACACTCATC 58.517 37.037 31.17 14.68 33.76 2.92
3007 5578 7.168135 CGTTCATATATATGCGCATACACTCAT 59.832 37.037 31.17 18.12 33.76 2.90
3008 5579 6.472163 CGTTCATATATATGCGCATACACTCA 59.528 38.462 31.17 11.70 33.76 3.41
3009 5580 6.560433 GCGTTCATATATATGCGCATACACTC 60.560 42.308 31.17 14.75 41.53 3.51
3010 5581 5.232202 GCGTTCATATATATGCGCATACACT 59.768 40.000 31.17 18.56 41.53 3.55
3011 5582 5.232202 AGCGTTCATATATATGCGCATACAC 59.768 40.000 31.41 13.22 43.10 2.90
3012 5583 5.348164 AGCGTTCATATATATGCGCATACA 58.652 37.500 31.41 22.05 43.10 2.29
3013 5584 5.890110 AGCGTTCATATATATGCGCATAC 57.110 39.130 31.41 17.70 43.10 2.39
3014 5585 5.276820 GCAAGCGTTCATATATATGCGCATA 60.277 40.000 31.41 30.72 43.10 3.14
3015 5586 4.494690 GCAAGCGTTCATATATATGCGCAT 60.495 41.667 31.41 28.23 43.10 4.73
3016 5587 3.181521 GCAAGCGTTCATATATATGCGCA 60.182 43.478 31.41 14.96 43.10 6.09
3017 5588 3.345714 GCAAGCGTTCATATATATGCGC 58.654 45.455 26.87 26.87 41.92 6.09
3032 5603 0.790207 ACACAATACAGACGCAAGCG 59.210 50.000 13.50 13.50 46.03 4.68
3033 5604 2.969443 AACACAATACAGACGCAAGC 57.031 45.000 0.00 0.00 45.62 4.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.